BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780396|ref|YP_003064809.1| peptidyl-prolyl cis-trans isomerase protein [Candidatus Liberibacter asiaticus str. psy62] (317 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|254780396|ref|YP_003064809.1| peptidyl-prolyl cis-trans isomerase protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040073|gb|ACT56869.1| peptidyl-prolyl cis-trans isomerase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 317 Score = 157 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 317/317 (100%), Positives = 317/317 (100%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI Sbjct: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF Sbjct: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI Sbjct: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES Sbjct: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH Sbjct: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 Query: 301 EAEYVKKLRSNAIIHYY 317 EAEYVKKLRSNAIIHYY Sbjct: 301 EAEYVKKLRSNAIIHYY 317 >gi|209885477|ref|YP_002289334.1| SurA N- domain family [Oligotropha carboxidovorans OM5] gi|209873673|gb|ACI93469.1| SurA N- domain family [Oligotropha carboxidovorans OM5] Length = 330 Score = 154 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 6/309 (1%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 LS F+ + F I V S + I +NGE IT DI +R L+ L Sbjct: 24 LSVFVSRIALAFAAFIILAVTAPSV----QAQGIVVMVNGEPITTYDIEQRTKLITLTTR 79 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + A+QELI + LK +E +K G+ ++ V+ F A+ +S++ + L QG Sbjct: 80 KAPTRQQALQELIDDRLKIKEAKKFGVDLSASDVDSAFAGMAQRMRISSDQLAQVLQAQG 139 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + K L + W +V+ F E ++ A + + E + + Sbjct: 140 VRPDTMKFRLKADTAWGALVRGRFKQSLLVGERDVQAAVGENPSGERTESYEYHMRPIVL 199 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 + G V++R K+AE R R+ + + + SI +DL P + Sbjct: 200 FVPRGSSGAVEQRKKEAEALRERIQSC-EEATRVFKSLRQASIRDTIVKTSADLPPNLRE 258 Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 LL K+ T P VT++G+E +A+C+++ + K + K E Y++ Sbjct: 259 LLDKTPVGRMTAPEVTRQGIEMVALCNRQVTTADTPAKRAARDKLFAQKYEAKSKSYLED 318 Query: 308 LRSNAIIHY 316 LR A+I Y Sbjct: 319 LRKRAMIEY 327 >gi|115525297|ref|YP_782208.1| hypothetical protein RPE_3295 [Rhodopseudomonas palustris BisA53] gi|115519244|gb|ABJ07228.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 305 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 63/305 (20%), Positives = 121/305 (39%), Gaps = 2/305 (0%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 + L + F ++ + + + +NGE IT DI +R L +L Sbjct: 1 MIALRLSRLCFAFALLLTTGLSTELRAQSVVVMVNGEPITSYDIDQRSKLTQLSTRKTPP 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + ++ELI E +K +E +K GI ++ F +S E + L GI + Sbjct: 61 RQEVIEELINEKVKIKEGKKFGIDPSGADIDSSFANMGSRMRMSPEQLTQTLANSGIRPD 120 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K + + +W +V+ F E +I A + + + + Sbjct: 121 TLKHRMRAEMVWTSLVRGRFKDSLLVGEKDIQAALGDSDKPAGESFEYQMRPVVLIVPRN 180 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 + R+K+AE R R+ + C + + + +I +DL P + LL K Sbjct: 181 AAPASREARMKEAEALRARV-QTCEEANALFKSMPNAAIRATVSKTSADLPPSLRELLDK 239 Query: 253 SQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + T P T++GVE +A+C ++ + K + + K E Y++ +R Sbjct: 240 TPIGHLTAPEATKQGVEMVALCSRKPTTADTPKKREIREKMFAEKFEAKSKAYLRDVRKA 299 Query: 312 AIIHY 316 A++ Y Sbjct: 300 AMVEY 304 >gi|90423813|ref|YP_532183.1| hypothetical protein RPC_2310 [Rhodopseudomonas palustris BisB18] gi|90105827|gb|ABD87864.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 320 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 63/305 (20%), Positives = 124/305 (40%), Gaps = 4/305 (1%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 ++L+ + + + + + +NGE IT+ DI +R L+ L Sbjct: 18 LRLIRVALCCAVAMLA--ICLGPDLHAQSVAVMVNGEPITNYDIEQRSKLMALSTHKSPS 75 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + ELI E +K +E +K GI ++ F +SAE + L+ QGI Sbjct: 76 RQQVIDELINEKVKIREGKKFGIDPSVADIDGSFAGMGSRMRMSAEQLTKSLEGQGIRPE 135 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 KQ + + +W +V+ F E E+ A + + + + + Sbjct: 136 TLKQRMRAEMVWTSLVRGRFKDSLLVGEKEVRAALGGDDKSSGESFEYQMRPIVLIVPRN 195 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 + R+K+AE R R+ + + + + +I +D+ + +L K Sbjct: 196 AAPSARELRMKEAEALRSRVQSCA-EADDLFKSMQNAAIRDTVTKTSADIPGVLREVLDK 254 Query: 253 SQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + T P VT++GVE +A+C ++ + K + + K E Y++ +R Sbjct: 255 TPIGHLTAPEVTKQGVEMVALCSRKPTTADTPKKREIRDKMFADKFEAKSKSYLRDVRKA 314 Query: 312 AIIHY 316 A+I Y Sbjct: 315 AMIEY 319 >gi|229592952|ref|YP_002875071.1| putative chaperone [Pseudomonas fluorescens SBW25] gi|229364818|emb|CAY52844.1| putative chaperone [Pseudomonas fluorescens SBW25] Length = 444 Score = 149 bits (374), Expect = 7e-34, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 100/311 (32%), Gaps = 17/311 (5%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGE 71 VL + ++ + ++ ++ +VI + +R+ ++ Sbjct: 12 LVLGALLLGTASAHAAVQQLDKVVAIVDNDVIMQSQLDQRVKEVQQTIAKRGGGVPPTSV 71 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L++ ++ LIVE L+ Q ++SGI +N A+ +S + F + L G+ Sbjct: 72 LDQQVLERLIVENLQLQIGDRSGIRISDEELNQAVGTIAQRNNMSIDQFRAALAHDGLSY 131 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + I V + + E E+ + IP Sbjct: 132 EDARDQIRREMIISRVRQRRVAERVQVSEQEVKNFLASDLGKMQLSEELHLANILIPTPD 191 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLLESDLHPQF-Q 247 N + + RL + + + + + G + + L P F + Sbjct: 192 SANSEQLNAAAAKTQAIYDRLKAGADFAQMAIAQSGSDNALEGGDMGWRKAAQLPPPFDR 251 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEY 304 L T P T G + + +KR + ++ + + + E E Sbjct: 252 ELSAMEVGGITQPARTPGGFIILKLLEKRGGETSLKDEVHVRHILVKPSEIRTEAQTKEL 311 Query: 305 VKKLRSNAIIH 315 +K+ I Sbjct: 312 AQKIYDR--IE 320 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 15/139 (10%), Positives = 48/139 (34%), Gaps = 3/139 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 + ++++ + ++ + + + F+ ++ G ++ Sbjct: 291 HVRHILVKPSEIRTEAQTKELAQKIYDRIESGEDFATLAKSFSEDPGSALNGGDLNWIDP 350 Query: 240 SDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKI 297 L P+FQ ++ Q + P+ TQ G + + +R + K Sbjct: 351 KALVPEFQQVMADTPQGVLSKPFKTQYGWHVLEVLGRRATDNTNQAREQQALNVLRNRKY 410 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ +++++R A + Sbjct: 411 DEELQTWLRQIRDEAYVEN 429 >gi|92113046|ref|YP_572974.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chromohalobacter salexigens DSM 3043] gi|122070642|sp|Q1QZ33|SURA_CHRSD RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|91796136|gb|ABE58275.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chromohalobacter salexigens DSM 3043] Length = 435 Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 112/315 (35%), Gaps = 16/315 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK----- 67 ++ +++ + P ++ RI +N + I + R+ ++ Q Sbjct: 3 LRSFAFLGFMLLVAMAPSMASAQPQPLDRIVAVVNKDAIMQSRLEDRVTQVRRQMASRNV 62 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 +L + + +I+E ++ Q E++ ++ D +N A + G+S ++F+ L Sbjct: 63 PAPNEADLRRQVLDRMILEQIQLQMAERANLSIDDTQLNATVRGIAEDNGMSMDEFADAL 122 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ G+ ++ + + + V ++ + + E+ + Y + +L Sbjct: 123 EEDGMSLASMREQVRREMLLRQVQQSQVASRVNVTDREVERYLDQQGETADTAYHLAHIL 182 Query: 185 FSIPDNKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 S+P++ Q Q +++D + +S G + L Sbjct: 183 VSVPESPTPEQVEQAQAKVRDLYRQLQNGANFAQLATAESDGQQALSGGDLGWRRGDQLP 242 Query: 244 PQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI---ALKAYLSAQNT---PTK 296 F +++ S + P + G + + D R GE + + P + Sbjct: 243 SLFADVVPTLSNGEVSEPIRSPSGFHLVKLIDTRGQQGEQKRVVTENRVRHILIGTNPNR 302 Query: 297 IEKHEAEYVKKLRSN 311 ++ + +R Sbjct: 303 NDQQAEALARDIRQR 317 Score = 93.6 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 46/138 (33%), Gaps = 3/138 (2%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238 R I N +N + +D + ++++ + G+ + Sbjct: 289 NRVRHILIGTNPNRNDQQAEALARDIRQRIANGESFAALAQEYSDDDGSALDGGELGWTR 348 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTK 296 + P F++ +K + P ++ G I + D+R + + K Sbjct: 349 PGQMVPAFEDAVKALDVGELSQPVRSRFGYHVIELEDRRRQDVTRDAQREQIRQTLFQRK 408 Query: 297 IEKHEAEYVKKLRSNAII 314 + + +++RS A I Sbjct: 409 VSDEMEAWTQEIRSGAYI 426 >gi|108758581|ref|YP_628738.1| peptidylprolyl cis-trans isomerase [Myxococcus xanthus DK 1622] gi|108462461|gb|ABF87646.1| peptidylprolyl cis-trans isomerase [Myxococcus xanthus DK 1622] Length = 325 Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 99/304 (32%), Gaps = 18/304 (5%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI----------AVQ 78 + ++ +N ++I ++ +R A + + + K A+ Sbjct: 18 GSGGAAHAELVDKVAAVVNRDIIALSEVQQRAAPEMARVNDPDPRKRGEQRLQLMKTALD 77 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSFLDKQGIGDNHFKQY 137 LI E L + EI + GIT V+ + F L +G+ ++ Sbjct: 78 TLIGEKLMESEIAQLGITASEAEVDELVADVRQQNNITDPAQFEQLLLGEGLTMATYRDM 137 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIRTVLFSIPDNKLQNQ 195 + + + +++ + E ++ A + + + R +L + Q Sbjct: 138 MRKRILRDRLLRMKVGPQVKITEEDLKAAYTQYTRMESGDSEVHARHILVQVDAKATAEQ 197 Query: 196 GFVQKRIKDAEESRLR--LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK- 252 K+ +A + R + + G + + P F+ Sbjct: 198 VEAAKKRAEAIATEARRPGMDFASLARARSEGPSAADGGDLGWFKRGVMVPAFEKAAFGL 257 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + + P T G + + ++R ++ L + K EK +YV++LR Sbjct: 258 PEGGVSEPVRTNFGWHVLKVEERRTVAAASYEEMRPKLEGKLLQEKTEKFLDQYVQELRQ 317 Query: 311 NAII 314 A + Sbjct: 318 KANV 321 >gi|85716332|ref|ZP_01047305.1| hypothetical protein NB311A_19130 [Nitrobacter sp. Nb-311A] gi|85696848|gb|EAQ34733.1| hypothetical protein NB311A_19130 [Nitrobacter sp. Nb-311A] Length = 319 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 62/305 (20%), Positives = 126/305 (41%), Gaps = 2/305 (0%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 L + L +F + VS+ S + + +NGE IT DI +R L+K+ Sbjct: 5 SLFRPFSRLAVFAFLSFVSFNSPLSAQSVAVMVNGEPITTFDIEQRSRLIKISTHKSASR 64 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + + ELI E +K +E +K G+ S ++ + G+S E + L QG+ + Sbjct: 65 QEVIDELIGEKVKIKEAKKFGVNPTSADIDRAYANMGARMGMSPEQLTKSLASQGVRPDT 124 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY-LIRTVLFSIPDNKL 192 K L +W +V+ F + ++ + + + + + Sbjct: 125 IKARLRADLVWGSLVRGRFKESLLVSDRDVNEALKNSGEDQSKIEGVEYQMRPVVLIVPR 184 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 V + ++ S + C + + + ++ +DL P ++LL K Sbjct: 185 GAAASVMEARRNEANSLRERVQSCADAIRIVKAMRNATLRDRVTKTSADLPPPLRDLLDK 244 Query: 253 SQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + T P +T++G+E +A+C+K+ + K + + K EK Y++ +R + Sbjct: 245 TPVGHLTPPEITRQGIEMVAVCEKKVTSVDTPKKREIREKMFADKYEKRSKSYLENIRRS 304 Query: 312 AIIHY 316 A+I Y Sbjct: 305 AMIEY 309 >gi|92117866|ref|YP_577595.1| hypothetical protein Nham_2343 [Nitrobacter hamburgensis X14] gi|91800760|gb|ABE63135.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 319 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 124/304 (40%), Gaps = 2/304 (0%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 LL + L +F ++ + + + +NGE IT DI +R L+++ + Sbjct: 6 LLRAFCHLALFAVLSFACLNAPLHAQSVAVMVNGEPITSFDIEQRSRLIQISTHKTPTRQ 65 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + ELI E +K +E +K G+ S ++ + +S E + L QG+ + Sbjct: 66 QVIDELINEKVKVKEAKKFGVNPTSADIDQQYASMGARMRMSPEQLTKSLASQGVRPDTI 125 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY-LIRTVLFSIPDNKLQ 193 K L +W +V+ F + ++ + + + + Sbjct: 126 KARLKADLVWGSLVRGRFKDSLLVSDRDVNEALRNSGEDQSKTEGFEYQMRPVVLVVPRG 185 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 V + + ++ + C + + + +I + +DL P ++LL K+ Sbjct: 186 AAASVMESRRKEADALRERVQSCADATRIFKAMRNATIRETVVKTSADLPPPIRDLLDKT 245 Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + T P +T++GVE +AIC K+ + K + + K EK +Y++ +R +A Sbjct: 246 PVGHLTPPEITRQGVEMVAICGKKATSVDTPKKKEIREKMFAEKYEKKSKDYLEDIRKSA 305 Query: 313 IIHY 316 +I Y Sbjct: 306 MIEY 309 >gi|312963417|ref|ZP_07777899.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas fluorescens WH6] gi|311282223|gb|EFQ60822.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas fluorescens WH6] Length = 444 Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 99/309 (32%), Gaps = 15/309 (4%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGE 71 VL + ++ + ++ ++ +VI + +R+ ++ Sbjct: 12 LVLGALFLGAASAHAAVQQLDKVVAIVDNDVIMQSQLDQRVKEVQQTIAKRGGGVPPTSV 71 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L++ ++ LIVE L+ Q E+SGI +N A+ +S + F + L G+ Sbjct: 72 LDQQVLERLIVENLQLQIGERSGIRISDEELNQAVGTIAQRNNMSIDQFRAALAHDGLSY 131 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + I V + + E E+ + IP Sbjct: 132 EDARDQIRREMIISRVRQRRVAERVQVSEQEVKNFLASDLGKMQLSEELHLANILIPTPD 191 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLLESDLHPQF-Q 247 N + + RL + + + + + G + + L P F + Sbjct: 192 SANSEQLNAAAAKTQAIYERLKAGADFAQMAIAQSGSDNALEGGDMGWRKAAQLPPPFDR 251 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEY 304 L T P T G + + ++R + ++ + + + E E Sbjct: 252 ELSAMEVGGITQPARTPGGFIILKLLERRGGETSLKDEVHVRHILVKPSEIRSEAQTKEL 311 Query: 305 VKKLRSNAI 313 +K+ Sbjct: 312 AQKIYDRIQ 320 Score = 89.7 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 15/139 (10%), Positives = 50/139 (35%), Gaps = 3/139 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 + ++++++ ++ + + + F+ ++ G ++ Sbjct: 291 HVRHILVKPSEIRSEAQTKELAQKIYDRIQSGEDFATLAKSFSEDPGSALNGGDLNWIDP 350 Query: 240 SDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKI 297 L P+FQ ++ Q + P+ TQ G + + +R + + K Sbjct: 351 KALVPEFQQVMADTPQGVLSKPFKTQYGWHVLEVLGRRATDNTSQAREQQALSVLRNRKY 410 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ +++++R A + Sbjct: 411 DEELQTWLRQIRDEAYVEN 429 >gi|327479275|gb|AEA82585.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas stutzeri DSM 4166] Length = 435 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 117/322 (36%), Gaps = 15/322 (4%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + T LSDF++ L +L+ + + R+ ++ +VI + +RI ++ Sbjct: 1 MKTKLSDFLRPLLLGTLLLGSATLTTAALAQVQPLDRVVAIVDNDVIMQSQLDQRIQEVR 60 Query: 65 LQK--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 N L++ ++ LI E L+ Q E+SG+ +N A+ ++ Sbjct: 61 QTIEKRGAEVPPNEVLQQQVLERLISENLQLQIGERSGVRISDEELNQAMATIAQRNNMT 120 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV- 175 E F L + G+ ++ + + I V + + E E+ Sbjct: 121 PEQFREALARDGLSPETAREQIRREMIISRVRQRRVAERIQVSEQEVQNFLASDLGKLQL 180 Query: 176 -REYLIRTVLFSIPDNKLQNQGFVQKRI-KDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 EY + +L +P+ +R+ +D E + ++ + + G Sbjct: 181 SEEYHLANILIPVPEAADSATIQAAERMARDTHEQLQKGADFARLAVARSASENALEGGD 240 Query: 234 AQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLS 289 + + L P F + + + + T P T G + + +KR + ++ Sbjct: 241 MGWRKAAQLPPPFDSLVRELAVGEFTEPVRTPPGFIIVKVLEKRGGETQVRDEVHVRHIL 300 Query: 290 AQNTPTKIEKHEAEYVKKLRSN 311 + + + E VK+LR Sbjct: 301 IKPSAIRSEDEARLLVKRLRER 322 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 14/139 (10%), Positives = 48/139 (34%), Gaps = 3/139 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 I + ++++ + +K E L F+ ++ G ++ Sbjct: 295 HVRHILIKPSAIRSEDEARLLVKRLRERILAGEDFAELARNFSEDPGSALNGGDLNWIDP 354 Query: 240 SDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKI 297 + L P+F+ ++ + + P+ + G + + +R + + Sbjct: 355 NSLVPEFRQVMANTASGELSQPFQSPYGWHILEVLGRRATDTSEEFREQQARNLLRNRRY 414 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ +++++R A + Sbjct: 415 DEELQAWLRQIRDEAYVEI 433 >gi|91977437|ref|YP_570096.1| hypothetical protein RPD_2969 [Rhodopseudomonas palustris BisB5] gi|91683893|gb|ABE40195.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 309 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 63/306 (20%), Positives = 128/306 (41%), Gaps = 6/306 (1%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L L +FC V + A + + +NGE IT+ DI +R L +L + Sbjct: 4 KFLFRILGLALFCTVTVGGGLGVATAQSVAVMVNGEPITNFDIEQRSKLDRLSRA-SRTR 62 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + + ELI E +K +E +K G++ + + F + +S + + L QGI Sbjct: 63 QQVLDELIDEKVKIREGKKYGVSPSDSDIESSFSTMSSRMRMSPDQMTKMLSAQGIRPET 122 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV---REYLIRTVLFSIPDN 190 K + + +W +V+ F E +I A + + + + Sbjct: 123 LKSKIKAEMVWASLVRGRFKDSLLVGEKDIQAQLGAKGGDEPATTESFEYQLRPVVLIVS 182 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250 + + ++ R K+AE R R+ + ++ + + +I +DL + +L Sbjct: 183 RGSDSSALEARRKEAESLRSRVQSCAD-ADRIFKALPNTAIRSTVVKTSADLPQALREIL 241 Query: 251 KKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 K+ T P T++G+E +A+C ++ + K + + K + EY++++R Sbjct: 242 DKTPVGQMTAPEATKQGIEMVALCSRKPTTADTPKKREIREKLFAEKFQAKSKEYLREVR 301 Query: 310 SNAIIH 315 + A+I Sbjct: 302 NAAMIE 307 >gi|330812129|ref|YP_004356591.1| peptidylprolyl isomerase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380237|gb|AEA71587.1| putative peptidylprolyl isomerase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 438 Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 109/310 (35%), Gaps = 17/310 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--------QKINGEL 72 +++ + + + ++ ++ +V+ + +R+ ++ Q G L Sbjct: 12 LMLGALFLGTAANAAVQSIDKVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGQPPPGVL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ ++ LIVE L+ Q E+SGI +N A+ +S + F + L + G+ Sbjct: 72 DQQVLERLIVENLQLQIGERSGIRITDEELNQAVGTIAQRNNMSIDQFRAALARDGLSYE 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + + + V + + E E+ + IP + Sbjct: 132 DARDQIRREMVISRVRQRRVAERIQVSEQEVKNFLASDLGKMQLSEELHLANILIPTPES 191 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 N +Q + A + +L + + + + + G + + L P F + Sbjct: 192 ANSEAIQSAYRQAMDVYQQLKQGADFGQMAIAKSGSDNALEGGDMGWRKPAQLPPPFDRE 251 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYV 305 L + + T P T G + + +KR G + ++ + + + E Sbjct: 252 LSAMAVGDITQPARTPGGFIILKVLEKRGGGTQVRDEVHVRHILIKPSEIRSEAETKRLA 311 Query: 306 KKLRSNAIIH 315 +KL I Sbjct: 312 EKLYDR--IE 319 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 13/139 (9%), Positives = 49/139 (35%), Gaps = 3/139 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 I ++++++ ++ + + + F+ ++ G ++ Sbjct: 290 HVRHILIKPSEIRSEAETKRLAEKLYDRIEAGEDFAELAKSFSEDPGSALNGGDLNWVDP 349 Query: 240 SDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKI 297 + L P+F+ ++ Q + P+ + G + + +R + K Sbjct: 350 NALVPEFRQVMADTPQGQLSKPFKSPYGWHVLEVLGRRATDSTTQAREQQAMTVLRNRKY 409 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ +++++R A + Sbjct: 410 DEELQTWLRQIRDEAYVEI 428 >gi|257092441|ref|YP_003166082.1| SurA domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044965|gb|ACV34153.1| SurA domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 436 Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 94/315 (29%), Gaps = 16/315 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING---- 70 LL + V ++ RI +N EVIT ++ R+ Q Sbjct: 9 LLMSCLVGVVLAQTASRPLAQPIPVDRIVAVVNDEVITLHELRTRLDGALAQLQRQGTQL 68 Query: 71 ----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 LE+ ++ L+++ ++ Q+ G+ D + + A +S F + L+K Sbjct: 69 PPRDVLERQMLERLVIDKVQLQQARDMGVRVDDAQLEQALQRIAAGNKMSLAQFRAALEK 128 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 GI F++ + + V + + K E EI Sbjct: 129 DGIAFASFREEIRGEMTIARVREREVESKIFISEGEIDNYLAGASGQGGAVEEFNLAHIL 188 Query: 187 IPDNKLQNQGFVQKRIKDAE---ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 + + + +QK E E + + ++ + G + L Sbjct: 189 LRSPESASPEQIQKLRAKGEQVAERVRKGEEFAQLAAAYSDAPDGLKGGDLGWRSLDRLP 248 Query: 244 PQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD----LGGEIALKAYLSAQNTPTKIE 298 P F + + + G I + KR + ++ + E Sbjct: 249 PLFAEAAATLKVGEVSPLLRSSNGFHLIKLVAKRGGGTLAAVQQTHARHILIKVNEVVSE 308 Query: 299 KHEAEYVKKLRSNAI 313 ++ LR Sbjct: 309 SEARHKLEGLRERIK 323 Score = 99.0 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 15/139 (10%), Positives = 45/139 (32%), Gaps = 2/139 (1%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 I N++ ++ + +++ E + F+ G ++ Sbjct: 292 QTHARHILIKVNEVVSESEARHKLEGLRERIKHGESFAELAKLFSQDGSATKGGDLGWVY 351 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTK 296 D P+F+ + + + P + G I + ++R + K Sbjct: 352 PGDTVPEFERAMNLLAPGEVSEPVQSPFGFHLIEVLERRVQDVSSDRQRAGARQVLRERK 411 Query: 297 IEKHEAEYVKKLRSNAIIH 315 ++ +++++ R A + Sbjct: 412 RDEAYQDWLRQTRDRAYVE 430 >gi|56476034|ref|YP_157623.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aromatoleum aromaticum EbN1] gi|56312077|emb|CAI06722.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aromatoleum aromaticum EbN1] Length = 454 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 104/327 (31%), Gaps = 21/327 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIV----SYKSWAMSSRIRTTINGEVITDGDISKRIA 61 +L L+ + C + + I +N EVIT ++ +R+ Sbjct: 13 RIALRRISSRLSLVLFAALSCATALFPAHAANPRSVEVDHIAAVVNNEVITARELRERVE 72 Query: 62 LLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 Q LE+ ++ L++E + Q ++ + D T+ + A + Sbjct: 73 QAIHQLNRQGTPQPPADVLERQLLERLVLERAQLQLARETSLQVDEATLERAIARIAESN 132 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 L+ + L+K G+ + F+ + + + + + + + + E+ + Sbjct: 133 RLTIAQLQAALEKDGVSWSRFRDNIRTEILLTRLREREVDNRIVVTDAEVDNFLANNADA 192 Query: 174 TVREYLIRTVLFSIPDN--KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 E + Q + R + A++ ++ ++ Sbjct: 193 LSGEEFELAHILIRVPEAATQQQMAGLVARAETAKQRLNSGDDFARVAASYSDAPDAMNG 252 Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR------DLGGEIAL 284 G + L P F + + + S + + + G+ + + D+R E Sbjct: 253 GALGWRSRDRLPPLFAEAVRELSPGSVSPVLRSSAGLHIVKLLDRRGGAAAGPQQLEQTR 312 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ + + + + LR Sbjct: 313 ARHILIRTSEILNDSEAESRLLGLRER 339 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 28/282 (9%), Positives = 85/282 (30%), Gaps = 14/282 (4%) Query: 46 INGEVI-TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 ++ ++ TD ++ +A E E + +++ + ++ Sbjct: 171 VDNRIVVTDAEVDNFLANNADALSGEEFE---LAHILIRVPEAATQQQMAGLVARAETAK 227 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN------ 158 + + A +S D G ++ + ++ + V+ Sbjct: 228 QRLNSGDDFARVAASYSDAPDAMNGGALGWRSRDRLPPLFAEAVRELSPGSVSPVLRSSA 287 Query: 159 --LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 +++ + + R I +++ N + R+ E + Sbjct: 288 GLHIVKLLDRRGGAAAGPQQLEQTRARHILIRTSEILNDSEAESRLLGLRERVVNGASFA 347 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 + ++ + G +L D P+F+ + + P + G I + + Sbjct: 348 ELAKAHSADLSSAKGGDLGWLSPGDTVPEFERTMNALKPGEVSAPVRSPFGWHLIQVEAR 407 Query: 276 R-DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 R + + K ++ +++++LR + Y Sbjct: 408 RLQDVSDERKRNAARNALRERKADEAFEDWLRQLRDRTYVEY 449 >gi|122070617|sp|Q5P7I9|SURA_AZOSE RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor Length = 439 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 40/324 (12%), Positives = 109/324 (33%), Gaps = 25/324 (7%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS--------SRIRTTINGEVITDGDISKRIALLK 64 ++ +++ L++F + + A + I +N EVIT ++ +R+ Sbjct: 1 MRRISSRLSLVLFAALSCATALFPAHAANPRSVEVDHIAAVVNNEVITARELRERVEQAI 60 Query: 65 LQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 Q LE+ ++ L++E + Q ++ + D T+ + A + L+ Sbjct: 61 HQLNRQGTPQPPADVLERQLLERLVLERAQLQLARETSLQVDEATLERAIARIAESNRLT 120 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + L+K G+ + F+ + + + + + + + + E+ + Sbjct: 121 IAQLQAALEKDGVSWSRFRDNIRTEILLTRLREREVDNRIVVTDAEVDNFLANNADALSG 180 Query: 177 EYLIRTVLFSIPDN--KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 E + Q + R + A++ ++ ++ G Sbjct: 181 EEFELAHILIRVPEAATQQQMAGLVARAETAKQRLNSGDDFARVAASYSDAPDAMNGGAL 240 Query: 235 QYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR------DLGGEIALKAY 287 + L P F + + + S + + + G+ + + D+R E + Sbjct: 241 GWRSRDRLPPLFAEAVRELSPGSVSPVLRSSAGLHIVKLLDRRGGAAAGPQQLEQTRARH 300 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSN 311 + + + + + LR Sbjct: 301 ILIRTSEILNDSEAESRLLGLRER 324 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 28/282 (9%), Positives = 85/282 (30%), Gaps = 14/282 (4%) Query: 46 INGEVI-TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 ++ ++ TD ++ +A E E + +++ + ++ Sbjct: 156 VDNRIVVTDAEVDNFLANNADALSGEEFE---LAHILIRVPEAATQQQMAGLVARAETAK 212 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN------ 158 + + A +S D G ++ + ++ + V+ Sbjct: 213 QRLNSGDDFARVAASYSDAPDAMNGGALGWRSRDRLPPLFAEAVRELSPGSVSPVLRSSA 272 Query: 159 --LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 +++ + + R I +++ N + R+ E + Sbjct: 273 GLHIVKLLDRRGGAAAGPQQLEQTRARHILIRTSEILNDSEAESRLLGLRERVVNGASFA 332 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 + ++ + G +L D P+F+ + + P + G I + + Sbjct: 333 ELAKAHSADLSSAKGGDLGWLSPGDTVPEFERTMNALKPGEVSAPVRSPFGWHLIQVEAR 392 Query: 276 R-DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 R + + K ++ +++++LR + Y Sbjct: 393 RLQDVSDERKRNAARNALRERKADEAFEDWLRQLRDRTYVEY 434 >gi|322417707|ref|YP_004196930.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18] gi|320124094|gb|ADW11654.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18] Length = 319 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 99/317 (31%), Gaps = 14/317 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 + + L+ V ++ S I +N EVIT D+ + AL++ + Sbjct: 1 MAKIIMACTLLALLAVT-PTFAHAKPISGIAAIVNDEVITSTDVDREYALMQKEAEKLPA 59 Query: 72 -----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 L+ A+ L+ + L +Q+I + I V + L+ E L Sbjct: 60 SEKMGLKSAALNRLVDKKLVEQKIRELDIKVSDEDVRLAIEDVKKQNNLTQEALEQALAT 119 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 QG+ ++ L Q ++ + K E E+ + + Sbjct: 120 QGLTFAQYQVQLKEQLERMRLMSQEVRSKIQVGEREMREYYESHRADYGGSETFHARHIF 179 Query: 187 IPDNKLQNQGFVQKRIK---DAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDL 242 + + K K + +K++ G SD+ Sbjct: 180 FKVDPKASAEDAAKAEKLAGEVLAKARAGEDFAELAKKYSQDPSAAKDGGDLGTFKRSDM 239 Query: 243 -HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEK 299 + + ++ + G+ I + K +K + Q K ++ Sbjct: 240 LPEIGDTVAAMKPGDVSSIVSSPAGLHIIKLEQKSQEKGRSFEEVKDSIEEQLYKKKSDE 299 Query: 300 HEAEYVKKLRSNAIIHY 316 ++VK+LR+ A I Sbjct: 300 RFNQWVKELRNAASIDI 316 >gi|119899176|ref|YP_934389.1| putative peptidyl-prolyl cis-trans isomerase [Azoarcus sp. BH72] gi|119671589|emb|CAL95502.1| putative peptidyl-prolyl cis-trans isomerase [Azoarcus sp. BH72] Length = 439 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 94/313 (30%), Gaps = 17/313 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----- 70 L V +P+ + RI +N EVIT + R+ Q Sbjct: 11 LFVALVACSALALPVRAAVQPVAVDRIIAVVNNEVITAVQLRDRVDQTTRQLQRQGVQLP 70 Query: 71 ---ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 LE+ ++ LIVE + Q S + D T+ + A N ++ + L++ Sbjct: 71 PADVLERQLLERLIVERAQLQLARDSSLRVDDATLERAIGRIAENNKMNTTQLRAALERD 130 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 G+ + F+ + + + + + + K + E+ + E + Sbjct: 131 GVAWDRFRNEIRTEILLSRLREREVDAKIVVTDAEVDNFLTSNPDAFSGEEFHVAHILLR 190 Query: 188 PDNKL--QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 + +++R + +S G + L Sbjct: 191 APEGATPEQIDRLRQRADTVINRLRNGEDFARVAADSSDAPDGISGGDLGWRQRDRLPAL 250 Query: 246 FQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR------DLGGEIALKAYLSAQNTPTKIE 298 + + ++ + + G+ + + D+R E ++ + + + Sbjct: 251 YSDAVRDLRPGELSPLMRSAAGLHLVKLVDRRGGAAAGPQRLEQTRARHILIKTSAVLSD 310 Query: 299 KHEAEYVKKLRSN 311 + LR Sbjct: 311 AEAEARLLGLRER 323 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 42/137 (30%), Gaps = 2/137 (1%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + L + + + E + ++ + G ++ D Sbjct: 298 RHILIKTSAVLSDAEAEARLLGLRERVVAGGADFGELAKASSADLSAAKGGDLGWVNPGD 357 Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKIEK 299 P+F+ + + P + G I + ++R K K E+ Sbjct: 358 TVPEFERAMNVLKPGEVSPPVRSPFGWHLIQVLERRQQDVTDERKRMAARNILRERKAEE 417 Query: 300 HEAEYVKKLRSNAIIHY 316 ++V++LR + + Y Sbjct: 418 AYEDWVRQLRDSTYVEY 434 >gi|307719645|ref|YP_003875177.1| PPIC-type PPIASE domain-containing protein [Spirochaeta thermophila DSM 6192] gi|306533370|gb|ADN02904.1| PPIC-type PPIASE domain protein [Spirochaeta thermophila DSM 6192] Length = 336 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 99/293 (33%), Gaps = 17/293 (5%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKIN----------GELEKIAVQELIVETLKKQEI 90 + +NGE + ++ + + Q +L + + LI L QE Sbjct: 45 EVAARVNGEEVPSKEVEREVQRYVAQYQQYGMEVSPEEEQKLREQVLDVLIGRLLLLQEA 104 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 ++ G++ D V Q+ +G S E F + L + G + F++ L+ + VV Sbjct: 105 KRMGLSVDQAQVEAQIEQYKLQSG-SEETFKNILAQAGYTEEEFREELSRAFLLQQVVDE 163 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI---KDAEE 207 + E A + + IR I + ++ + + +E Sbjct: 164 KVTKHLSVSDEEARAYYDENPEQFEQPEQIRARHILIRLDPDASKEEEEAAYAKIHEVQE 223 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKG 266 + ++ + G + + P F+ N ++ T+ G Sbjct: 224 KLKQGADFAELARTYSEGPSAPNGGDLGFFGRGQMVPAFEEAAFALEVNQVSDVVRTEYG 283 Query: 267 VEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + I + DK++ G +K L K + V++L+ A I Y Sbjct: 284 LHLIQVTDKQEAGKASFEEVKDQLKEMLLQQKSSEAINALVEELKGKAEIEIY 336 >gi|225023463|ref|ZP_03712655.1| hypothetical protein EIKCOROL_00321 [Eikenella corrodens ATCC 23834] gi|224943812|gb|EEG25021.1| hypothetical protein EIKCOROL_00321 [Eikenella corrodens ATCC 23834] Length = 317 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 109/312 (34%), Gaps = 10/312 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---- 68 +K+ T L + + S + I + EVIT ++ + +A + Q Sbjct: 1 MKMKTLVLALGMSLAFQVASANTVRSVDNIVAVVENEVITQRELDQAVAHTRSQMPRGTQ 60 Query: 69 --NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 EL++ + +L+ ++L Q ++ I V + A + S F + + Sbjct: 61 VSEQELQRQTLMQLVNQSLLVQAGRRNNIQVPDAEVEAEIARIAASRRQSLAQFEAAQAR 120 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV--REYLIRTVL 184 GI ++ + I V + + E EI A + + + + +T Sbjct: 121 FGIDKTALRRQVRDSMIAQRVQQGQTAGEAKVSEDEINAAIARARAQGITLPQATPKTQY 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + Q+ + ++ R +++ + G +L E + P Sbjct: 181 HAQHILIASQGERAQRLAQRLAQNAQRGADFSALARQYSQDGSAANGGDLGWLSEGETVP 240 Query: 245 QFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKHEA 302 +F+ ++ + P TQ G I + + R + ++A + K + Sbjct: 241 EFERAMRGLKPGQVSAPVHTQFGWHVIRLVEARTPNTPDARIRAGVHDAIAAQKTQAAMQ 300 Query: 303 EYVKKLRSNAII 314 +++L N+ I Sbjct: 301 SLLQQLHQNSFI 312 >gi|316933705|ref|YP_004108687.1| SurA domain [Rhodopseudomonas palustris DX-1] gi|315601419|gb|ADU43954.1| SurA domain [Rhodopseudomonas palustris DX-1] Length = 308 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 62/308 (20%), Positives = 122/308 (39%), Gaps = 4/308 (1%) Query: 12 FIKLLTTYFVLIIFC--IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 + L+ + ++ C + + + I +NGE IT+ DI +R L ++ N Sbjct: 1 MMSKLSLRIIGLVLCCAAATLGLGTGPSQAQSIVVMVNGEPITNFDIEQRSKLNRMSHKN 60 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + + +LI E +K +E +K G+ + ++ F A +S ++ L QGI Sbjct: 61 ES-RQQVLDDLIDEKVKIKEGKKYGVNPSDSDIDSSFATMASRMRMSTAQMTNMLAAQGI 119 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIP 188 + K + + +W +V+ F E EI A + + Y + + Sbjct: 120 RPDTLKSRIKAEMVWGSLVRGRFKDSLQVSEREIQAQLKGNDDSKAVESYEYQLRPIVMI 179 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 ++ + R K+AE+ R R+ F + + G Sbjct: 180 VSRGSGSSSLDTRRKEAEQIRGRITSCAEADRIFKAMPNAAIRGTVVKTSADLPPALRDV 239 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 L K + T P VT++GVE +A+C ++ + K + + K +Y++++ Sbjct: 240 LDKTPVGHLTAPEVTKQGVEMVALCGRKQSTADTPRKREIREKLFGEKFLAKSKDYLQEV 299 Query: 309 RSNAIIHY 316 R A+I Y Sbjct: 300 RKAAMIEY 307 >gi|254473455|ref|ZP_05086852.1| SurA N-terminal domain family protein [Pseudovibrio sp. JE062] gi|211957571|gb|EEA92774.1| SurA N-terminal domain family protein [Pseudovibrio sp. JE062] Length = 313 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 73/312 (23%), Positives = 130/312 (41%), Gaps = 12/312 (3%) Query: 15 LLTTYFVLIIFCIVPIVS-----YKSWAMSSRIRTTINGEVITDGDISKRIALLKL--QK 67 + T F +F I++ S +S+I +NG IT ++ +R L+ L + Sbjct: 1 MKLTRFCASLFVAASILAPVGPMLTSAEAASKIVAVVNGRPITSYELQQRSKLISLTTRA 60 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 + ++ A ELI E LK E ++ G++ + V+ F A+ +S F L + Sbjct: 61 PSSIAKRKAKDELIDEALKLAEAKRVGVSISDSKVDDAFATIAQRVKMSPSQFKQALSQS 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI---TVREYLIRTVL 184 G+ K L + W +VV F E ++ A Q +N Sbjct: 121 GVNPRTLKSRLRAEISWSEVVMQRFRATVRINESDVIAALQGRENKDDSGATSVEYDLQR 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 K ++ F KR+ + ++ R R + + AS +++V + LE+DL P Sbjct: 181 IIFVIPKNSSKTFKNKRVSEMKKLRARFTSC-EEGTRLASGLNEVVVRPIGKRLETDLPP 239 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 F + L + S T P G E IA+C K + + ++ + + K ++ Sbjct: 240 AFVKKLNEISIGRVTAPTPVDSGFEMIALCGKETINSDATARSTIEGELRNKKGQQLSRR 299 Query: 304 YVKKLRSNAIIH 315 Y++ LRSNA+I Sbjct: 300 YLRDLRSNAVIE 311 >gi|115375725|ref|ZP_01462979.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Stigmatella aurantiaca DW4/3-1] gi|310825132|ref|YP_003957490.1| peptidylprolyl cis-trans isomerase [Stigmatella aurantiaca DW4/3-1] gi|115367288|gb|EAU66269.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Stigmatella aurantiaca DW4/3-1] gi|309398204|gb|ADO75663.1| Peptidylprolyl cis-trans isomerase [Stigmatella aurantiaca DW4/3-1] Length = 322 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 52/299 (17%), Positives = 110/299 (36%), Gaps = 19/299 (6%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKING-----------ELEKIAVQELIVET 84 + R+ +N ++IT ++++R A + ++ K ++ LI E Sbjct: 21 AELVDRVAAVVNRDIITLSEVNQRAAPELSRLAGEKDPRRRADGRAQILKQSLDVLIAEK 80 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 L + EI + G+T + V+ + G + E F L ++G ++++L+ Q Sbjct: 81 LIEAEIRELGMTVSPSEVDEAMADVRKQNGVETPEQFEQLLQREGYTLKSYREFLSKQIA 140 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 +++ K E ++ A + + E + + + Q V K Sbjct: 141 RGRLMQMKVGPKVKVSEEDLKAAYAQYAKLEGGEAEVHARHILVSVDPKATQEQVDAAQK 200 Query: 204 DA----EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT 258 A EE+R + + G + + P F+ + + Sbjct: 201 KAQAIAEEARRPGMDFASLARARSEGPSAEDGGDLGFFRRGVMVPAFEKTAFALKEGEVS 260 Query: 259 NPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 P T G + + ++R + L+A L Q K EK+ +YV++LR + + Sbjct: 261 EPIRTNFGWHVLKVEERRAVGVAPFEDLRAKLEQQLRQDKTEKYIDQYVQELRQKSSVE 319 >gi|70732935|ref|YP_262706.1| survival protein SurA [Pseudomonas fluorescens Pf-5] gi|68347234|gb|AAY94840.1| survival protein SurA [Pseudomonas fluorescens Pf-5] Length = 440 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 104/310 (33%), Gaps = 17/310 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGEL 72 +++ + + + ++ ++ +V+ + +R+ ++ L Sbjct: 14 LMLGALFLSTAASAAVQSIDKVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGVPPTSVL 73 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 E+ ++ LIVE L+ Q E+SGI +N A+ +S E F + L G+ Sbjct: 74 EQQVLERLIVENLQLQIGERSGIRITDEELNQAIGTIAQRNSMSIEQFRAALAHDGLSYE 133 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + + I V + + E E+ + IP + Sbjct: 134 DARDQVRREMIISRVRQRRVAERIQVSEQEVKNFLASDLGKMQLSEELHLANILIPTPES 193 Query: 193 QNQGFV---QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 N + ++ + + + + + + G + + L P F + Sbjct: 194 ANSEAIQSAARQAMEVYQQLKQGADFAQLAIARSGSDNALEGGDMGWRKAAQLPPPFDRE 253 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYV 305 L + + T P T G + + DKR G + ++ + + + E+ Sbjct: 254 LSAMAVGDITQPARTPGGFIILKLLDKRGGGNQVRDEVHVRHILIKPSEIRSEEETKRLA 313 Query: 306 KKLRSNAIIH 315 +KL I Sbjct: 314 QKLYDR--IE 321 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 13/139 (9%), Positives = 50/139 (35%), Gaps = 3/139 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 I ++++++ ++ + + + ++ ++ G ++ Sbjct: 292 HVRHILIKPSEIRSEEETKRLAQKLYDRIEAGEDFAELAKSYSEDPGSALNGGDLNWIDP 351 Query: 240 SDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKI 297 + L P+F+ ++ K Q + P+ + G + + +R + K Sbjct: 352 NALVPEFREVMAKTPQGQLSKPFKSPYGWHVLEVLGRRATDSTSQAREQQAMTVLRNRKY 411 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ +++++R A + Sbjct: 412 DEELQTWLRQIRDEAYVEI 430 >gi|330878394|gb|EGH12543.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330963847|gb|EGH64107.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. actinidiae str. M302091] Length = 440 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 106/313 (33%), Gaps = 19/313 (6%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ +L Sbjct: 12 LMLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAADL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+E L+ Q E+SGI + +N A+ +S + F + L G+ N Sbjct: 72 QPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVDQFRAALAHDGLSYN 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I V + + E E+ + I Sbjct: 132 DAREQVRREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSEEFHLANILIATPDS 191 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + +Q A+ +L K + + +S + + G + + L P F Sbjct: 192 ASSDAIQAAAVKAKSIYDQLKKGADFAKIAATTSSSENALEGGDMGWRKAAQLPPPFGDM 251 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAE 303 L + T P T G + + +KR G + ++ + + + E+ Sbjct: 252 LSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRSEEATKL 311 Query: 304 YVKKLRSNAIIHY 316 +K+ I Sbjct: 312 LAQKIYER--IEN 322 Score = 93.2 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 15/149 (10%), Positives = 52/149 (34%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++++ + + E + F+ + Sbjct: 282 QGQAQMRDEVHVRHILIKPSEIRSEEATKLLAQKIYERIENGEDFATLAKSFSEDPGSAL 341 Query: 230 SIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-Y 287 + G ++ + L P+F++++ Q + P+ T G + + +R + Sbjct: 342 NGGDLNWVDPNSLVPEFRDVMSSTPQGELSKPFKTAYGWHVLEVLGRRATDATGQARDQQ 401 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K ++ +++++R A + Sbjct: 402 ALSVLRNRKYDEELQTWLRQIRDEAYVEI 430 >gi|78224732|ref|YP_386479.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter metallireducens GS-15] gi|78195987|gb|ABB33754.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter metallireducens GS-15] Length = 333 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 53/319 (16%), Positives = 103/319 (32%), Gaps = 17/319 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--- 71 ++ T + I + S + +RI +N E+IT + K A + + + Sbjct: 1 MIKTLITATLVLIATLPSPSHAEVVNRILAVVNDEIITSYAVEKEKATILKEAERQQPPP 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L++ A+ LI + L +Q++ + I V R LS E S L Sbjct: 61 PPESLVHLDETALNRLIDKKLVEQKVRELDIKVSEEEVRQAIEDVKRQNKLSQESLVSAL 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 QG+ + +K + Q +V + K E E+ + E R Sbjct: 121 ANQGLSFDQYKVQIREQLERLRLVSQEVRSKIQVGEREMREYYEANPGRFGGEENFRARN 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVS-IGKAQYLLES 240 ++ V+K + A + + + G + Sbjct: 181 IYFKLDEKMPADQVKKIMTTALTVLHEARDGKDFAELARQHSDDPAAKNTGGDLGTFRKG 240 Query: 241 D-LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKI 297 D L ++L+K ++ G+ + + + +KA + K Sbjct: 241 DILPEFEESLIKMKPGEVSDLIYVSGGLHIVKLEARFAGTPKPFEQVKAEVEDILYRKKS 300 Query: 298 EKHEAEYVKKLRSNAIIHY 316 E+ ++V LR A I Sbjct: 301 EERFNQWVADLRKGAAIEI 319 >gi|294671290|ref|ZP_06736142.1| hypothetical protein NEIELOOT_02999 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307017|gb|EFE48260.1| hypothetical protein NEIELOOT_02999 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 320 Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 97/315 (30%), Gaps = 13/315 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK-----LQK 67 +K ++ C S + VIT + +A + + Sbjct: 1 MKPQKILTAALLACFFQTASAADIKTVDGVAAVAGDSVITMRQFEQAVAQARRLPAAQRP 60 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 EL + + +LI ++L Q ++ G+ V+ A +S + + K Sbjct: 61 PENELRQQVLAQLINQSLIVQAGKRRGLAATQAEVDEAVAHAAAEQKISVDQLYARAAKD 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP------ANKQKMKNITVREYLIR 181 G+ ++ A + V + + E E+ + R Sbjct: 121 GLSKAALRRQTADALVAQKVQQQAILQNARVSEAEVDAALARAQQQGVAIPEGKAPRQYR 180 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I K + I + +++ G + + Sbjct: 181 AQHILIKAEKENAVAAAETVINKIRAQAEKGRDFGELARQYSQDGSAPQGGDLGWFGDGM 240 Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEK 299 + P+F++ ++K + + P TQ G I + D R++ E + + K E+ Sbjct: 241 MVPEFESAVQKLKKGQVSRPVRTQFGWHLIKLNDVREVGTPEERRRNTIRQYIMQQKAEQ 300 Query: 300 HEAEYVKKLRSNAII 314 + +++L + + Sbjct: 301 AAGQLLQQLHESTYV 315 >gi|302130724|ref|ZP_07256714.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 440 Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 105/313 (33%), Gaps = 19/313 (6%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ +L Sbjct: 12 LMLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAADL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+E L+ Q E+SGI + +N A+ +S E F + L G+ Sbjct: 72 QPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYE 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I V + + E E+ + I Sbjct: 132 DAREQVRREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSEEFHLANILIATPDS 191 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + +Q A+ +L K + + +S + + G + + L P F Sbjct: 192 ASSDAIQAAAVKAKSIYDQLKKGADFAKIAATTSSSENALEGGDMGWRKAAQLPPPFGDM 251 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAE 303 L + T P T G + + +KR G + ++ + + + E+ Sbjct: 252 LSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRSEEATKL 311 Query: 304 YVKKLRSNAIIHY 316 +K+ I Sbjct: 312 LAQKIYER--IEN 322 Score = 92.8 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 15/149 (10%), Positives = 52/149 (34%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++++ + + E + F+ + Sbjct: 282 QGQAQMRDEVHVRHILIKPSEIRSEEATKLLAQKIYERIENGEDFATLAKSFSEDPGSAL 341 Query: 230 SIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-Y 287 + G ++ + L P+F++++ Q + P+ T G + + +R + Sbjct: 342 NGGDLNWVDPNSLVPEFRDVMSSTPQGELSKPFKTAYGWHVLEVLGRRATDATGQARDQQ 401 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K ++ +++++R A + Sbjct: 402 ALSVLRNRKYDEELQTWLRQIRDEAYVEI 430 >gi|167031450|ref|YP_001666681.1| SurA domain-containing protein [Pseudomonas putida GB-1] gi|166857938|gb|ABY96345.1| SurA domain [Pseudomonas putida GB-1] Length = 441 Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 45/322 (13%), Positives = 110/322 (34%), Gaps = 17/322 (5%) Query: 9 LSDFIKLL-TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK 67 ++ KL+ VL+ ++ + + R+ ++ +V+ + +R+ ++ Sbjct: 1 MNVKTKLIDRLRPVLLGAALLSGAVHAAVQPLDRVVAIVDNDVVMQSQLDQRVHEVQQTI 60 Query: 68 --------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 G LE+ ++ LIVE L+ Q E+SGI +N A+ G+S + Sbjct: 61 AKRGGGVPPTGALEQQVLERLIVENLQLQIGERSGIRITDEELNQAIGTIAQRNGMSLDQ 120 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 F + L G+ + ++ + + I V + + E E+ Sbjct: 121 FRAALAHDGLSFDDAREQVKREMIISRVRQRRVAERIQVSEQEVKNFLNSDMGKMQMSEE 180 Query: 180 IR---TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 R ++ + + +++ D + + ++ + + G+ + Sbjct: 181 YRLANILIPTPEAANSDDIQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGW 240 Query: 237 LLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG----EIALKAYLSAQ 291 L P F +L T P G + + +KR + ++ + Sbjct: 241 RKAGQLPPDFAKMLSSMPVGEITQPIRIPNGFIILKLEEKRGGSENVLRDEVHVRHILIK 300 Query: 292 NTPTKIEKHEAEYVKKLRSNAI 313 + + E + ++L Sbjct: 301 PSEIRSEAATEQLAERLYDRIK 322 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 26/274 (9%), Positives = 86/274 (31%), Gaps = 9/274 (3%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELI-----VETLKKQEIEKSGITFDSNTVNYF 105 +++ ++ + + E ++A LI + Q+ + Sbjct: 159 VSEQEVKNFLNSDMGKMQMSEEYRLA-NILIPTPEAANSDDIQKAARKVGDVYQQLRQGA 217 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 ++E+ + A V + ++ N + + Sbjct: 218 DFGQMAIANSASENALEGGEMGWRKAGQLPPDFAKMLSSMPVGEITQPIRIPNGFIILKL 277 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 +++ + V + I ++++++ ++ + + + F+ Sbjct: 278 EEKRGGSENVLRDEVHVRHILIKPSEIRSEAATEQLAERLYDRIKNGEDFGELAKSFSED 337 Query: 226 I-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 ++ G ++ + L P+F+ + Q T P+ TQ G + + +R Sbjct: 338 PGSALNGGDLNWVDPNSLVPEFREQMANAQQGVVTKPFKTQYGWHVLEVLGRRATDSTEQ 397 Query: 284 LKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + K ++ +++++R A + Sbjct: 398 AREQQALSVLRNRKYDEELQTWLRQIRDEAYVEI 431 >gi|331017629|gb|EGH97685.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 440 Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 105/313 (33%), Gaps = 19/313 (6%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ +L Sbjct: 12 LMLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAADL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+E L+ Q E+SGI + +N A+ +S E F + L G+ Sbjct: 72 QPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYE 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I V + + E E+ + I Sbjct: 132 DAREQVRREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSEEFHLANILIATPDS 191 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + +Q A+ +L K + + +S + + G + + L P F Sbjct: 192 ASSDAIQAAAVKAKSIYDQLKKGADFAKIAATTSSSENALEGGDMGWRKAAQLPPPFGDM 251 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAE 303 L + T P T G + + +KR G + ++ + + + E+ Sbjct: 252 LSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRSEEATRL 311 Query: 304 YVKKLRSNAIIHY 316 +K+ I Sbjct: 312 LAQKIYER--IEN 322 Score = 92.4 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 15/149 (10%), Positives = 52/149 (34%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++++ + + E + F+ + Sbjct: 282 QGQAQMRDEVHVRHILIKPSEIRSEEATRLLAQKIYERIENGEDFATLAKSFSEDPGSAL 341 Query: 230 SIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-Y 287 + G ++ + L P+F++++ Q + P+ T G + + +R + Sbjct: 342 NGGDLNWVDPNSLVPEFRDVMSSTPQGELSKPFKTAYGWHVLEVLGRRATDATGQARDQQ 401 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K ++ +++++R A + Sbjct: 402 ALSVLRNRKYDEELQTWLRQIRDEAYVEI 430 >gi|254787082|ref|YP_003074511.1| chaperone SurA precursor [Teredinibacter turnerae T7901] gi|237683982|gb|ACR11246.1| chaperone SurA precursor [Teredinibacter turnerae T7901] Length = 428 Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 103/314 (32%), Gaps = 15/314 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69 + + + + + + SY M R+ ++ VIT ++ RIA + + Sbjct: 1 MTSIFVSVLAVFALALSLPSYSQPQMLDRVVVIVDKSVITQSELDSRIANITQRAAQAGM 60 Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L+K + +LI ETL+ ++ GI +N + G E F+ + Sbjct: 61 RLPGRDVLQKQVLDQLISETLQLNMAKRYGIEISDADLNGAIQNIKASRGWDDETFAREI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT---VREYLIR 181 + + F++ L + V + + E EI + L Sbjct: 121 HAEAANMHEFRENLRREITLQQVSQGVVRGRIRISEQEISNFLKSADAQFWISPDYRLGH 180 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 ++ P + +KR + + + +S + G + +D Sbjct: 181 ILIPLPPAPSKEQTEAAEKRAEAIYQQLVNGANFGEMAIAESSGPSALKGGDLGFRKSAD 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN---TPTKI 297 L F + + + P +Q G + + DKR ++ +A + + Sbjct: 241 LPTLFAEIAPTLEVGDVSKPARSQAGFHILKLMDKRGETKQVVSQAKVRHILLKPSAILP 300 Query: 298 EKHEAEYVKKLRSN 311 ++++R Sbjct: 301 SDKARAKLEQMREQ 314 Score = 88.2 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 42/126 (33%), Gaps = 3/126 (2%) Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-L 250 + K + E+ + + I +S G + +F Sbjct: 300 PSDKARAKLEQMREQIIKGEADFAELAKDNSEDIGSKMSGGDLGWAEPDTFVGEFAQTIR 359 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + P+ TQ G + + D+R E A++A T + E +++++R Sbjct: 360 DTKIGEISEPFQTQFGWHILEVLDRRQEDLTEEAIRAKARQVLTSRRFEDETQVWLQEMR 419 Query: 310 SNAIIH 315 +A I Sbjct: 420 DDAFIE 425 >gi|121596392|ref|YP_988288.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax sp. JS42] gi|120608472|gb|ABM44212.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax sp. JS42] Length = 471 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 100/308 (32%), Gaps = 17/308 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGEL 72 + + + + I +N E IT+ ++ +R + Q L Sbjct: 48 AATLLPPAGATASNAPRQADYIVAVVNSEPITNNEVRQRTERVVQQIASQGGQVPPQELL 107 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 K ++ LI+E ++ Q+ +++GI D VN AR +S ++ L GI Sbjct: 108 AKEVLERLILEKIQVQQAKETGIKVDDYAVNQAEQSVARQNSISVDEMHRRLAADGISKE 167 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI----RTVLFSIP 188 F++ L Q + + + D + ++E+ ++ + L ++ Sbjct: 168 RFREELRNQLLALRLRERDVESRVRVSDLEVDQYLREQRQAAGPGKLELNLGHILVKVPE 227 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 + R ++A +++ + G F N Sbjct: 228 NAGPDEVAQRSARAQEALAKVQAGGDFGAVAREYSDAPEGANGGLLGLRPADRYPELFVN 287 Query: 249 -LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL----KAYLSAQNTPTKIEKHEAE 303 + S + P + G + + DK G ++ + E+ AE Sbjct: 288 ATQQASVGSVVGPVRSPSGFHILKVVDKTQSGVPTTAVQSHARHILLRTNANLSERQAAE 347 Query: 304 YVKKLRSN 311 ++ LR Sbjct: 348 RLEDLRDR 355 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 16/139 (11%), Positives = 45/139 (32%), Gaps = 2/139 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + + L + ++ + +++ G + Sbjct: 328 HARHILLRTNANLSERQAAERLEDLRDRVARGGADFAALAREYSQDGSAKDGGDLGWASP 387 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKI 297 P+F+ L + P V++ GV I + ++R+ + + K+ Sbjct: 388 GRYVPEFEEALNALRPGEISRPVVSRFGVHLIQLLERREAKLTQREQREMVRDTVREKKL 447 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ A ++++ R A + Y Sbjct: 448 DEAFATWIQEARGRAYVEY 466 >gi|222056791|ref|YP_002539153.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. FRC-32] gi|221566080|gb|ACM22052.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. FRC-32] Length = 320 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 97/318 (30%), Gaps = 16/318 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING---- 70 + + + + + + + +N +VIT ++ K + + Sbjct: 1 MNKFLLYFAVSVLFICPAAAKGELITAVAAIVNDDVITTLEVQKETDQIIKEMEKKGPAE 60 Query: 71 -----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 L KIA+ LI + L +Q+I++ I + + L+ E + L Sbjct: 61 TPDKAALRKIALDRLIDKKLVEQKIKELDIKVPEEELRQSIEDVKKQNNLTQEALVAALA 120 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 QG+ +K L Q ++ + K E EI + N E R Sbjct: 121 GQGLSFEQYKTQLREQLERLRLMSQEVRSKIQVGEREIREYYEANHNRYGEEEFFRARHI 180 Query: 186 SIPDNKLQNQGFVQKRI---KDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESD 241 K + K + + +F+ G + D Sbjct: 181 FFKVGKDAPESEAAKVMTTATQVLQEARSGKDFAELARQFSDDPAAKKDGGDLGTFKKGD 240 Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIE 298 + + + + ++P T G I + + K +KA + K E Sbjct: 241 MIGEIEAAVSGMKPGEVSDPVKTAAGFHIIKLEERSKGKPRPFEEVKAEIEDLLYKKKSE 300 Query: 299 KHEAEYVKKLRSNAIIHY 316 + ++V LR A I Sbjct: 301 ERFNQWVNDLRKGAAIEI 318 >gi|325922420|ref|ZP_08184189.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas gardneri ATCC 19865] gi|325547117|gb|EGD18202.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas gardneri ATCC 19865] Length = 466 Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 37/320 (11%), Positives = 106/320 (33%), Gaps = 17/320 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK- 67 ++ +L ++I + P+ S + RI ++ +V+ ++ + + +K Q Sbjct: 1 MTKPFSVLLASLLVITSTVSPMASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYA 60 Query: 68 -------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + L++ ++ L++ L+ + +GI +N A+ G + + Sbjct: 61 GRDNQLPPDDVLQRQVLERLVLVKLQVGRADSTGIRVSDEELNRAIASIAQQNGTTVDGL 120 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 L G+G F+ + + I + ++ + E E+ + + +L Sbjct: 121 RQKLAADGMGYGDFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTALAQQATTGSQYHLA 180 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLLE 239 ++ + QK++ + + +++ + + G + Sbjct: 181 HILVGLPEGANAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSL 240 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQ 291 ++ F + P G + + + + RD K ++ + Sbjct: 241 DEIPNAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKLVTEYNARHILVR 300 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 + E + LR+ Sbjct: 301 IGDNQTEAQAKAKIDTLRAR 320 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 41/155 (26%), Gaps = 3/155 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + Q + + +I ++ Sbjct: 275 VEMRDANAGGEKKLVTEYNARHILVRIGDNQTEAQAKAKIDTLRARITGGADFQATAKES 334 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + G + P F + + + + P+ TQ G + R Sbjct: 335 SEDTNSRGQGGDLGWFPADAFGPDFGKQVEGLADGAVSEPFRTQAGWHIVQRVGSRQTDV 394 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + +A + K+E+ Y+++LR A + Sbjct: 395 SAESQRAQIRETIGRRKLEEEYNRYLQELRGEAYV 429 >gi|26987145|ref|NP_742570.1| survival protein SurA [Pseudomonas putida KT2440] gi|24981777|gb|AAN66034.1|AE016232_7 survival protein SurA [Pseudomonas putida KT2440] Length = 439 Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 110/329 (33%), Gaps = 25/329 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M +K+ L VL+ ++ + + R+ ++ +V+ + +R+ Sbjct: 1 MKTKLIDRLRP---------VLLGVALLSGAVHAAVQPLDRVVAIVDNDVVMQSQLDQRV 51 Query: 61 ALLKLQK--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 ++ LE+ ++ LIVE L+ Q E+SGI +N A+ Sbjct: 52 HEVQQTIAKRGGGVPPTSALEQQVLERLIVENLQLQIGERSGIRITDEELNQAIGTIAQR 111 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 G+S + F + L + G+ + ++ + + I V + + E E+ Sbjct: 112 NGMSLDQFRAALARDGLSFDDAREQVKREMIISRVRQRRVAERIQVSEQEVKNFLASDLG 171 Query: 173 ITVREYLIR---TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 R ++ + + +++ D + + ++ + + Sbjct: 172 KMQMSEEYRLANILIPTPEAANSDDIQKAARKVGDVYQQLRQGADFGQMAIANSASENAL 231 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG----EIAL 284 G+ + L P F +L T P G + + +KR + Sbjct: 232 EGGEMGWRKAGQLPPDFAKMLSSMPVGEITQPIRIPNGFIILKLEEKRGGSENVLRDEVH 291 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++ + + + E + ++L Sbjct: 292 VRHILIKPSEIRSEAATEQLAERLYDRIK 320 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 22/233 (9%), Positives = 72/233 (30%), Gaps = 3/233 (1%) Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 Q+ + ++E+ + A Sbjct: 197 IQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGWRKAGQLPPDFAKMLSSMP 256 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V + ++ N + + +++ + V + I ++++++ ++ + Sbjct: 257 VGEITQPIRIPNGFIILKLEEKRGGSENVLRDEVHVRHILIKPSEIRSEAATEQLAERLY 316 Query: 207 ESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQ 264 + + F+ ++ G ++ + L P+F+ + Q T P+ TQ Sbjct: 317 DRIKNGEDFGELAKSFSEDPGSALNGGDLNWVDPNSLVPEFREQMANAQQGVVTKPFKTQ 376 Query: 265 KGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G + + +R + + K ++ +++++R A + Sbjct: 377 YGWHVLEVLGRRATDSTEQAREQQALSVLRNRKYDEELQTWLRQIRDEAYVEI 429 >gi|313496769|gb|ADR58135.1| Chaperone surA [Pseudomonas putida BIRD-1] Length = 439 Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 109/329 (33%), Gaps = 25/329 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M +K+ L VL+ ++ + + R+ ++ +V+ + +R+ Sbjct: 1 MKTKLIDRLRP---------VLLGVALLSGAVHAAVQPLDRVVAIVDNDVVMQSQLDQRV 51 Query: 61 ALLKLQK--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 ++ LE+ ++ LIVE L+ Q E+SGI +N A+ Sbjct: 52 HEVQQTIAKRGGGVPPTSALEQQVLERLIVENLQLQIGERSGIRITDEELNQAIGTIAQR 111 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 G+S + F + L + G+ ++ + + I V + + E E+ Sbjct: 112 NGMSLDQFRAALARDGLSFEDAREQVKREMIISRVRQRRVAERIQVSEQEVKNFLASDLG 171 Query: 173 ITVREYLIR---TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 R ++ + + +++ D + + ++ + + Sbjct: 172 KMQMSEEYRLANILIPTPEAANSDDIQKAARKVGDVYQQLRQGADFGQMAIANSASENAL 231 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG----EIAL 284 G+ + L P F +L T P G + + +KR + Sbjct: 232 EGGEMGWRKAGQLPPDFAKMLSSMPVGEITQPIRIPNGFIILKLEEKRGGSENVLRDEVH 291 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++ + + + E + ++L Sbjct: 292 VRHILIKPSEIRSEAATQQLAERLYDRIK 320 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 23/233 (9%), Positives = 71/233 (30%), Gaps = 3/233 (1%) Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 Q+ + ++E+ + A Sbjct: 197 IQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGWRKAGQLPPDFAKMLSSMP 256 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V + ++ N + + +++ + V + I ++++++ Q+ + Sbjct: 257 VGEITQPIRIPNGFIILKLEEKRGGSENVLRDEVHVRHILIKPSEIRSEAATQQLAERLY 316 Query: 207 ESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQ 264 + + F+ ++ G ++ + L P+F+ + Q T P+ TQ Sbjct: 317 DRIKNGEDFGELAKSFSEDPGSALNGGDLNWVDPNSLVPEFREQMANAQQGVVTKPFKTQ 376 Query: 265 KGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G + + +R + K ++ +++++R A + Sbjct: 377 YGWHVLEVLGRRATDSTEQAREQQALGVLRNRKYDEELQTWLRQIRDEAYVEI 429 >gi|146281122|ref|YP_001171275.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas stutzeri A1501] gi|145569327|gb|ABP78433.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas stutzeri A1501] Length = 451 Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 39/301 (12%), Positives = 96/301 (31%), Gaps = 15/301 (4%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEKIAVQE 79 + + R+ ++ +VI +++R+ ++ L++ ++ Sbjct: 40 LAPAALAQVQPLDRVVAIVDNDVIMQSQLNQRMREVQQTIEKRGADAPPTDVLQQQVLER 99 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 LI E L+ Q E+SGI +N A+ +S E F L + G+ ++ + Sbjct: 100 LITENLQLQIGERSGIRISDEELNQAMGTIAQRNNMSLEQFREALARDGLSLETAREQIR 159 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR---TVLFSIPDNKLQNQG 196 + + V + + E+ ++ Sbjct: 160 REMVISRVRQRRVAERIQVSNQEVQNFLASDLGKLQLSEEYHLANILIAVPEGADSATIQ 219 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 ++ D + + + + + G + + L P F +++ S Sbjct: 220 AAERTAMDTYQQLQQGADFARLAVSRSGSENALEGGDMGWRKAAQLPPPFDTEVRELSVG 279 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 T P T G + + DKR + ++ + + + ++ V++LR Sbjct: 280 EVTQPVRTPPGFIMLKLLDKRGGETQVRDEVHVRHILIKPSAIRSDEEARLLVQRLRDRI 339 Query: 313 I 313 Sbjct: 340 N 340 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 11/138 (7%), Positives = 45/138 (32%), Gaps = 3/138 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 I + +++ + ++ + F+ ++ G ++ Sbjct: 311 HVRHILIKPSAIRSDEEARLLVQRLRDRINAGEDFAQLARSFSEDPGSALNGGDLNWIDP 370 Query: 240 SDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKI 297 + L P+F+ ++ + + + G + + +R + + K Sbjct: 371 ASLVPEFREVMANTPSGELSQVFKSPYGWHILEVLGRRATDASEQFREQQALSLLRNRKY 430 Query: 298 EKHEAEYVKKLRSNAIIH 315 ++ +++++R A + Sbjct: 431 DEELQAWLRQIRDEAYVE 448 >gi|148545689|ref|YP_001265791.1| SurA domain-containing protein [Pseudomonas putida F1] gi|148509747|gb|ABQ76607.1| SurA N-terminal domain [Pseudomonas putida F1] Length = 439 Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 110/329 (33%), Gaps = 25/329 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M +K+ L VL+ ++ + + R+ ++ +V+ + +R+ Sbjct: 1 MKTKLIDRLRP---------VLLGVALLSGAVHAAVQPLDRVVAIVDNDVVMQSQLDQRV 51 Query: 61 ALLKLQK--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 ++ LE+ ++ LIVE L+ Q E+SGI +N A+ Sbjct: 52 HEVQQTIAKRGGGVPPTSALEQQVLERLIVENLQLQIGERSGIRITDEELNQAIGTIAQR 111 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 G+S + F + L + G+ + ++ + + I V + + E E+ Sbjct: 112 NGMSLDQFRAALARDGLSFDDAREQVKREMIISRVRQRRVAERIQVSEQEVKNFLASDLG 171 Query: 173 ITVREYLIR---TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 R ++ + + +++ D + + ++ + + Sbjct: 172 KMQMSEEYRLANILIPTPEAANSDDIQKAARKVGDVYQQLRQGADFGQMAIANSASENAL 231 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG----EIAL 284 G+ + L P F +L T P G + + +KR + Sbjct: 232 EGGEMGWRKAGQLPPDFAKMLSSMPVGEITQPIRIPNGFIILKLEEKRGGSENVLRDEVH 291 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++ + + + E + ++L Sbjct: 292 VRHILIKPSEIRSEAATQQLAERLYDRIK 320 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 23/233 (9%), Positives = 72/233 (30%), Gaps = 3/233 (1%) Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 Q+ + ++E+ + A Sbjct: 197 IQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGWRKAGQLPPDFAKMLSSMP 256 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V + ++ N + + +++ + V + I ++++++ Q+ + Sbjct: 257 VGEITQPIRIPNGFIILKLEEKRGGSENVLRDEVHVRHILIKPSEIRSEAATQQLAERLY 316 Query: 207 ESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQ 264 + + F+ ++ G ++ + L P+F+ + Q T P+ TQ Sbjct: 317 DRIKNGEDFGELAKSFSEDPGSALNGGDLNWVDPNSLVPEFREQMANAQQGVVTKPFKTQ 376 Query: 265 KGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G + + +R + + K ++ +++++R A + Sbjct: 377 YGWHVLEVLGRRATDSTEQAREQQALSVLRNRKYDEELQTWLRQIRDEAYVEI 429 >gi|222112631|ref|YP_002554895.1| sura domain-containing protein [Acidovorax ebreus TPSY] gi|221732075|gb|ACM34895.1| SurA domain protein [Acidovorax ebreus TPSY] Length = 471 Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 100/308 (32%), Gaps = 17/308 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGEL 72 + + + + I +N E IT+ ++ +R + Q L Sbjct: 48 AATLLPPAGATASNAPRQADYIVAVVNSEPITNNEVRQRTERVVQQIASQGGKVPPQELL 107 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 K ++ LI+E ++ Q+ +++GI D V+ AR +S ++ L GI Sbjct: 108 AKEVLERLILEKIQVQQAKETGIKVDDYAVSQAEQSVARQNSISVDEMHRRLAADGISKE 167 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI----RTVLFSIP 188 F++ L Q + + + D + ++E+ ++ + L ++ Sbjct: 168 RFREELRNQLLALRLRERDVESRVRVSDLEVDQYLREQRQAAGPGKLELNLGHILVKVPE 227 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 + R ++A +++ + G F N Sbjct: 228 NAGPDEVAQRSARAQEALAKVQAGGDFGAVAREYSDAPEGANGGLLGLRPADRYPELFVN 287 Query: 249 -LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL----KAYLSAQNTPTKIEKHEAE 303 + S + P + G + + DK G ++ + E+ AE Sbjct: 288 ATQQASVGSVVGPVRSPAGFHILKVVDKTQSGVPTTAVQSHARHILLRTNANLSERQAAE 347 Query: 304 YVKKLRSN 311 ++ LR Sbjct: 348 RLEDLRDR 355 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 16/139 (11%), Positives = 45/139 (32%), Gaps = 2/139 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + + L + ++ + +++ G + Sbjct: 328 HARHILLRTNANLSERQAAERLEDLRDRVARGGADFAALAREYSQDGSAKDGGDLGWASP 387 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI-ALKAYLSAQNTPTKI 297 P+F+ L + P V++ GV I + ++R+ + + K+ Sbjct: 388 GRYVPEFEEALNALRPGEISRPVVSRFGVHLIQLLERREAKLTQREQRDMVRDTVREKKL 447 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ A ++++ R A + Y Sbjct: 448 DEAFATWIQEARGRAYVEY 466 >gi|104779703|ref|YP_606201.1| peptidyl-prolyl cis-trans isomerase A [Pseudomonas entomophila L48] gi|95108690|emb|CAK13384.1| putative peptidyl-prolyl cis-trans isomerase A [Pseudomonas entomophila L48] Length = 439 Score = 142 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 115/329 (34%), Gaps = 25/329 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M SK+ L + + ++ + + R+ ++ +V+ + +R+ Sbjct: 1 MKSKLIDRLRPLM---------LGAVLLSGAVHAAVQPIDRVVAIVDNDVVMQSQLDQRV 51 Query: 61 ALLKLQKIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 ++ G LE+ ++ LIVE L+ Q E+SGI +N A+ Sbjct: 52 HEVQQTIAKRGGGVPPAGALEQQVLERLIVENLQLQIGERSGIRITDEELNQAVGTIAQR 111 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 G+S E F + L G+ + ++ + + I V + + E E+ Sbjct: 112 NGMSLEQFRAALAHDGLSYDDAREQIKREMIISRVRQRRVAERIQVSEQEVKNFLNSDLG 171 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE---KFASKIHDV 229 R IP + N +Q + A + +L + + ++ + + Sbjct: 172 KMQLSEEYRLANILIPTPESANSDAIQAAARQAGDVYQQLKQGADFARLAIARSASENAL 231 Query: 230 SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG----EIAL 284 G+ + L P F + L + + T P G + + +KR + Sbjct: 232 EGGEMGWRKAGQLPPDFAKMLSSMATGDVTQPIRIPNGFIILKLEEKRGGESSVLRDEVH 291 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++ + + + +K + ++L Sbjct: 292 VRHILIKPSEIRSDKATEQLAERLYDRIK 320 Score = 89.7 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 16/139 (11%), Positives = 48/139 (34%), Gaps = 3/139 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 I +++++ ++ + + + F+ ++ G ++ Sbjct: 291 HVRHILIKPSEIRSDKATEQLAERLYDRIKNGEDFSELAKSFSEDPGSALNGGDLNWVDP 350 Query: 240 SDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKI 297 + L P+F+ + Q T P+ TQ G + + +R + K Sbjct: 351 NSLVPEFREQMANAQQGEVTRPFRTQYGWHVLEVMGRRATDSTAQAREQQAMNVLRNRKY 410 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ +++++R A + Sbjct: 411 DEELQTWLRQIRDEAYVEI 429 >gi|330961060|gb|EGH61320.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 440 Score = 142 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 100/313 (31%), Gaps = 19/313 (6%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ L Sbjct: 12 LMLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEAL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 +K + LI+E L+ Q E++GI +N A+ +S + F + L G+ + Sbjct: 72 QKQVLDRLILENLQLQMGERAGIRVSDEELNQAIGTIAQRNNMSVDQFRAALAHDGLSYD 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I V + + E E+ + I Sbjct: 132 DAREQVRREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSEEFHLANILIATPDS 191 Query: 193 QNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + +Q + + +S + + G + + L P F Sbjct: 192 ASSEAIQAAAIKAKSIYDQLKKGADFGKLATTNSSSENALEGGDMGWRKAAQLPPPFGDM 251 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAE 303 L + T P T G + + +KR G + ++ + + + E+ Sbjct: 252 LSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRSEEATKL 311 Query: 304 YVKKLRSNAIIHY 316 +K+ I Sbjct: 312 LAQKIYDR--IEN 322 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 14/149 (9%), Positives = 50/149 (33%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++++ + + + + F+ + Sbjct: 282 QGQAQMRDEVHVRHILIKPSEIRSEEATKLLAQKIYDRIENGEDFATLAKSFSEDPGSAL 341 Query: 230 SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-Y 287 + G ++ + L P+F + + Q + P+ T G + + +R + Sbjct: 342 NGGDLNWVDPNSLVPEFREVMSNTPQGVLSKPFKTAYGWHVLEVLGRRATDATGQAREQQ 401 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K ++ +++++R A + Sbjct: 402 ALSVLRNRKYDEELQTWLRQIRDEAYVEI 430 >gi|285019522|ref|YP_003377233.1| ppic-type peptidyl-prolyl cis-trans isomerase [Xanthomonas albilineans GPE PC73] gi|283474740|emb|CBA17239.1| probable ppic-type peptidyl-prolyl cis-trans isomerase protein [Xanthomonas albilineans] Length = 455 Score = 142 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 37/320 (11%), Positives = 108/320 (33%), Gaps = 22/320 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQK-- 67 + + F+L + I + + + + RI ++ +V+ ++ + + +K Q Sbjct: 1 MTKTLSAFLLAVLAIAGVSAQAAVQQTQPLDRIAAVVDEDVVLQSELDRAVRNVKAQYAG 60 Query: 68 ------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 + L + ++ L++ L+ +GI + +N A+ + Sbjct: 61 RDTQLPPDNVLRRQVLERLVLVKLQVARANSTGIHVSDDELNRAIASIAQQNNTDVDGLR 120 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 + G+ + F+ + + + ++ + E E+ A + T +Y + Sbjct: 121 KKIAADGMSYDDFRNSVRDEITVQRLRQSFAQSRINVSESEVDAALTQQAT-TGTQYHLA 179 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP--KDCNKLEKFASKIHDVSIGKAQYLLE 239 +L +P+ Q + D +S + +++ + + G + Sbjct: 180 HILVGLPEGATAEQIKTAQGKIDGVKSLIDKGEIDFNAAAVRYSDSPNALEGGDLGWRSL 239 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQ 291 ++ F + P G + + + + RD K ++ A+ Sbjct: 240 DEIPNAFAQLIRDMKPGQVAGPLRGPSGFQLLKLVEVRDAAANPEKKTVTEYHARHILAR 299 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 + + + ++ LR+ Sbjct: 300 VSDAQPDAAAKAKIETLRAR 319 Score = 83.6 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 12/155 (7%), Positives = 44/155 (28%), Gaps = 3/155 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + Q + +I+ ++ Sbjct: 274 VEVRDAAANPEKKTVTEYHARHILARVSDAQPDAAAKAKIETLRARIAGGADFQKVAKEA 333 Query: 223 ASKIHDVS-IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA-ICDKRDLG 279 + + + G + F + ++ + P+ T+ G + + +++ Sbjct: 334 SDDTNSRNQGGDLGWFPIDAFGADFGHQVESLQDGQISPPFRTEAGWHILQRVGERQTDV 393 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +A + K+E+ +++++R A + Sbjct: 394 TSDTQRAQVRETIGRRKLEEEYNRFLQEMRGEAYV 428 >gi|122070668|sp|Q4K4X7|SURA_PSEF5 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor Length = 426 Score = 142 bits (356), Expect = 9e-32, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 101/306 (33%), Gaps = 17/306 (5%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEKIA 76 + + + ++ ++ +V+ + +R+ ++ LE+ Sbjct: 4 ALFLSTAASAAVQSIDKVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGVPPTSVLEQQV 63 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 ++ LIVE L+ Q E+SGI +N A+ +S E F + L G+ + Sbjct: 64 LERLIVENLQLQIGERSGIRITDEELNQAIGTIAQRNSMSIEQFRAALAHDGLSYEDARD 123 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + I V + + E E+ + IP + N Sbjct: 124 QVRREMIISRVRQRRVAERIQVSEQEVKNFLASDLGKMQLSEELHLANILIPTPESANSE 183 Query: 197 FV---QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252 + ++ + + + + + + G + + L P F + L Sbjct: 184 AIQSAARQAMEVYQQLKQGADFAQLAIARSGSDNALEGGDMGWRKAAQLPPPFDRELSAM 243 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + T P T G + + DKR G + ++ + + + E+ +KL Sbjct: 244 AVGDITQPARTPGGFIILKLLDKRGGGNQVRDEVHVRHILIKPSEIRSEEETKRLAQKLY 303 Query: 310 SNAIIH 315 I Sbjct: 304 DR--IE 307 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 13/139 (9%), Positives = 50/139 (35%), Gaps = 3/139 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 I ++++++ ++ + + + ++ ++ G ++ Sbjct: 278 HVRHILIKPSEIRSEEETKRLAQKLYDRIEAGEDFAELAKSYSEDPGSALNGGDLNWIDP 337 Query: 240 SDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKI 297 + L P+F+ ++ K Q + P+ + G + + +R + K Sbjct: 338 NALVPEFREVMAKTPQGQLSKPFKSPYGWHVLEVLGRRATDSTSQAREQQAMTVLRNRKY 397 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ +++++R A + Sbjct: 398 DEELQTWLRQIRDEAYVEI 416 >gi|28867781|ref|NP_790400.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. tomato str. DC3000] gi|81732691|sp|Q88A44|SURA_PSESM RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|28851016|gb|AAO54095.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. tomato str. DC3000] Length = 428 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 102/309 (33%), Gaps = 19/309 (6%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GELEKIA 76 ++ + + + ++ +VI + +R+ ++ +L+ Sbjct: 4 ALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAADLQPQV 63 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + LI+E L+ Q E+SGI + +N A+ +S E F + L G+ ++ Sbjct: 64 LDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYEDARE 123 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + I V + + E E+ + I + Sbjct: 124 QVRREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSEEFHLANILIATPDSASSD 183 Query: 197 FVQKRIKDAEESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252 +Q A+ +L K + + +S + + G + + L P F L Sbjct: 184 AIQAAAVKAKSIYDQLKKGADFAKIAATTSSSENALEGGDMGWRKAAQLPPPFGDMLSSM 243 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAEYVKK 307 + T P T G + + +KR G + ++ + + + E+ +K Sbjct: 244 PIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRSEEATKLLAQK 303 Query: 308 LRSNAIIHY 316 + I Sbjct: 304 IYER--IEN 310 Score = 92.4 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 15/149 (10%), Positives = 52/149 (34%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++++ + + E + F+ + Sbjct: 270 QGQAQMRDEVHVRHILIKPSEIRSEEATKLLAQKIYERIENGEDFATLAKSFSEDPGSAL 329 Query: 230 SIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-Y 287 + G ++ + L P+F++++ Q + P+ T G + + +R + Sbjct: 330 NGGDLNWVDPNSLVPEFRDVMSSTPQGELSKPFKTAYGWHVLEVLGRRATDATGQARDQQ 389 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K ++ +++++R A + Sbjct: 390 ALSVLRNRKYDEELQTWLRQIRDEAYVEI 418 >gi|237803361|ref|ZP_04590946.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025342|gb|EGI05398.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. oryzae str. 1_6] Length = 440 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 108/313 (34%), Gaps = 19/313 (6%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ L Sbjct: 12 LMLGALLLSGAVHAAVQPLDSVAAIVDNDVIMKSQVDQRVHEVQQTIAKRGSGVPPAEAL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 +K + LI+E L+ Q E+SGI + +N A+ +S E F + L G+ + Sbjct: 72 QKQVLDRLILENLQLQMGERSGIRVSDDELNQAIASIAQRNNMSVEQFRAALIHDGVSYD 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV--REYLIRTVLFSIPDN 190 ++ + + I V + + E E+ + E+ + +L + PD+ Sbjct: 132 DAREQVRREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSEEFHLANILIATPDS 191 Query: 191 KLQNQGFVQKRIKDAE-ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + + + + +S + + G + + L P F Sbjct: 192 ASSDVIQAAALKAKSIYDQAKKGADFAKLAATTSSSENALEGGDMGWRKAAQLPPPFGDM 251 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAE 303 L + T P T G + + +KR G + ++ + + + E+ Sbjct: 252 LSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRSEEATKL 311 Query: 304 YVKKLRSNAIIHY 316 +K+ I Sbjct: 312 LAQKIYER--IEN 322 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 15/149 (10%), Positives = 51/149 (34%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++++ + + E + F+ + Sbjct: 282 QGQAQMRDEVHVRHILIKPSEIRSEEATKLLAQKIYERIENGEDFAALAKSFSEDPGSAL 341 Query: 230 SIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-Y 287 + G ++ + L P+F+ ++ Q + P+ T G + + +R + Sbjct: 342 NGGDLNWVDPNSLVPEFREVMNSTPQGTLSKPFKTAYGWHVLEVLGRRATDATGQAREQQ 401 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K ++ +++++R A + Sbjct: 402 ALSVLRNRKYDEELQTWLRQIRDEAYVEI 430 >gi|66047852|ref|YP_237693.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. syringae B728a] gi|63258559|gb|AAY39655.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. syringae B728a] gi|330970840|gb|EGH70906.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 442 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 98/313 (31%), Gaps = 19/313 (6%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ L Sbjct: 14 LMLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEAL 73 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+E L+ Q E+SGI +N A+ +S E F + L G+ N Sbjct: 74 QPQVLDRLILENLQLQMGERSGIRVSDEELNQAIGTIAQRNNMSVEQFRAALAHDGLSYN 133 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I V + + + E+ I Sbjct: 134 DAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDMGKAQLSEEFHLANILIATPDS 193 Query: 193 QNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + +Q + + +S + + G + + L P F Sbjct: 194 ASSDAIQAAAVKAKGIYDQLKKGADFTRLAATSSSSENALEGGDMGWRKAAQLPPPFGDM 253 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAE 303 L + T P T G + + +KR G + ++ + + + E+ Sbjct: 254 LSSMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRNEEETKR 313 Query: 304 YVKKLRSNAIIHY 316 +K+ I Sbjct: 314 LAQKIYDR--IEN 324 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 55/149 (36%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++N+ ++ + + + F+ + Sbjct: 284 QGQAQMRDEVHVRHILIKPSEIRNEEETKRLAQKIYDRIENGEDFAELAKSFSEDPGSAL 343 Query: 230 SIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAY 287 + G ++ + L P+F+ ++ + Q + P+ TQ G + + +R + A + Sbjct: 344 NGGDLNWVDPNSLVPEFRQVMSETPQGVLSKPFQTQYGWHVLEVLGRRSTDATDQAREQQ 403 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ +++++R A + Sbjct: 404 ALNVLRNRKYDEELQTWLRQIRDEAYVEI 432 >gi|217969876|ref|YP_002355110.1| SurA domain protein [Thauera sp. MZ1T] gi|217507203|gb|ACK54214.1| SurA domain protein [Thauera sp. MZ1T] Length = 438 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 100/318 (31%), Gaps = 18/318 (5%) Query: 12 FIKLLTTYF-VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--- 67 F + + +P+ S RI +N EVIT ++ RI + Q Sbjct: 6 FRSRVAIAIGLAATTLALPVHSAPRAVEVDRIVAVVNNEVITGLELRARIEQTRRQLARQ 65 Query: 68 -----INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 L++ ++ LIVE + Q +S + D T++ + A N LS + + Sbjct: 66 GAQLPPEEVLQRQLLERLIVERAQLQLARESSLRVDDVTLDRAIERIASNNKLSIDQLRA 125 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 L+K G+ + F+ + + + + + + + + EI + + Sbjct: 126 TLEKDGVTWSRFRDEIRSEILLTRLREREVDSRIVVTDAEIDNFIANNPDAFSGQEFAVA 185 Query: 183 VLFSIPDNKL--QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 + Q V +R + + + + G + Sbjct: 186 HILLRTPEGASPQQVEAVARRAEQVMARLRSGEDFARVAAEVSDAPDGLQGGSLGWRPLD 245 Query: 241 DLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRD------LGGEIALKAYLSAQNT 293 L F + + + T+ + G+ + + D R E ++ + + Sbjct: 246 RLPALFADAVRRMRPGETSPVLRSAAGLHIVRLVDARGGGAAAVQKLEQTRARHILIKTS 305 Query: 294 PTKIEKHEAEYVKKLRSN 311 + + +R Sbjct: 306 EVLSDADAEARLLAIRER 323 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 50/144 (34%), Gaps = 2/144 (1%) Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 + R I +++ + + R+ E + + ++ + G Sbjct: 290 QKLEQTRARHILIKTSEVLSDADAEARLLAIRERVVNGADFAELAKASSADLSAARGGDL 349 Query: 235 QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQN 292 +L D P+F+ + + P + G I + ++R + +A Sbjct: 350 GWLNPGDTVPEFERAMNALRPGEVSAPVRSPFGWHLIQLVERRMQDVTDERKRAAARQAL 409 Query: 293 TPTKIEKHEAEYVKKLRSNAIIHY 316 K E+ +++++LR + + Y Sbjct: 410 RERKAEQAYEDWLRQLRDSTYVDY 433 >gi|21230267|ref|NP_636184.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769740|ref|YP_244502.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. campestris str. 8004] gi|81304306|sp|Q4UR41|SURA_XANC8 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|81796311|sp|Q8PCE1|SURA_XANCP RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|21111813|gb|AAM40108.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575072|gb|AAY50482.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. campestris str. 8004] Length = 463 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 106/320 (33%), Gaps = 17/320 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK- 67 ++ +L ++I + P+ S + RI ++ +V+ ++ + + +K Q Sbjct: 1 MTKPFSVLLASLLVITSTVSPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYA 60 Query: 68 -------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + L++ ++ L++ L+ E SGI +N A+ G S + Sbjct: 61 GRDNQLPPDDVLQRQVLERLVLVKLQVGRAEGSGIRVSDEELNRAIASIAQQNGTSVDGL 120 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 L G+G F+ + + I + ++ + E E+ + + +L Sbjct: 121 RQKLAADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTALAQQATTGSQYHLA 180 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLLE 239 ++ + QK++ + + +++ + + G + Sbjct: 181 HILVGLPEGATAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSL 240 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQ 291 ++ F + P G + + + + RD K ++ + Sbjct: 241 DEIPNAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKVLTEYNARHILVR 300 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 + E + LR+ Sbjct: 301 IGDNQTEAQAKAKIDTLRAR 320 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 41/155 (26%), Gaps = 3/155 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + Q + + +I + ++ Sbjct: 275 VEMRDANAGGEKKVLTEYNARHILVRIGDNQTEAQAKAKIDTLRARIVGGADFQATAKES 334 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + G + P F + + + + P+ TQ G + R Sbjct: 335 SEDTNSRGQGGDLGWFPADAFGPDFGKQVEGLTDGAVSEPFRTQAGWHIVQRVGTRQTDV 394 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +A + K+E+ Y+++LR A + Sbjct: 395 SAENQRAQIRETIGRRKLEEEYNRYLQELRGEAFV 429 >gi|254429963|ref|ZP_05043670.1| SurA N-terminal domain family [Alcanivorax sp. DG881] gi|196196132|gb|EDX91091.1| SurA N-terminal domain family [Alcanivorax sp. DG881] Length = 442 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 100/308 (32%), Gaps = 14/308 (4%) Query: 1 MTSKVFTSLSDFI--KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK 58 M + + + + + + ++P S M RI +N I ++ + Sbjct: 1 MIDRTLHAARRTLHARHTLLGLLAMAVLMLPAWSQAKVQMLDRIVAVVNDGAIMASELDE 60 Query: 59 RIALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 RI + LQ + + + +++E L+ Q E+ GI D ++N A Sbjct: 61 RINTIALQFQEKGQQLPPPAVMREQVLDRMVLERLQLQLAERGGIKVDDASLNQALAGIA 120 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 R G+S EDF++ L + G F++ + + + + + + E+ Sbjct: 121 RQNGMSLEDFAAALRQDGYDWPQFREQIREDMVISRLQQRSVASRIQVTDREVDRFLSSE 180 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIH 227 + + + + V + AE +L + + Sbjct: 181 LGKQMFQEDFHLGHILVRVPAEASPEDVTQARSKAESIVKKLNDGGDFQQLAVAESDGPK 240 Query: 228 DVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286 + G + F +N + + + P + G + + D++ ++ + Sbjct: 241 ALEGGDLGSRPAAQWPTLFAENAINLQKGEISEPLRSGAGFHILKMIDRKGGSEKVVTQY 300 Query: 287 YLSAQNTP 294 + Sbjct: 301 QVRHVLIK 308 Score = 83.2 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 54/141 (38%), Gaps = 3/141 (2%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 + D + ++ I+ +E + + +F+ S G+ ++ Sbjct: 300 YQVRHVLIKTDALTSAEQAHKQAIRLHDEIAAGERQFSDTAAEFSDDPGSARSGGELGWV 359 Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPT 295 + ++ P+F++++ + + + +Q G ++ + D RD + + Sbjct: 360 NKGEMVPEFEDMMLNTPVGELSPVFESQFGWHFLRVDDVRDADMSAEFRRMQATQALQKR 419 Query: 296 KIEKHEAEYVKKLRSNAIIHY 316 + E+ +V++ RS + + Sbjct: 420 RFEEELETWVQEKRSESYVDI 440 >gi|188992953|ref|YP_001904963.1| Peptidylprolyl isomerase [Xanthomonas campestris pv. campestris str. B100] gi|167734713|emb|CAP52923.1| Peptidylprolyl isomerase [Xanthomonas campestris pv. campestris] Length = 463 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 106/320 (33%), Gaps = 17/320 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK- 67 ++ +L ++I + P+ S + RI ++ +V+ ++ + + +K Q Sbjct: 1 MTKPFSVLLASLLVITSTVSPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYA 60 Query: 68 -------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + L++ ++ L++ L+ E SGI +N A+ G S + Sbjct: 61 GRDNQLPPDDVLQRQVLERLVLVKLQVGRAEGSGIRVSDEELNRAIASIAQQNGTSVDGL 120 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 L G+G F+ + + I + ++ + E E+ + + +L Sbjct: 121 RQKLAADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTALAQQATTGSQYHLA 180 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLLE 239 ++ + QK++ + + +++ + + G + Sbjct: 181 HILVGLPEGATAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSL 240 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQ 291 ++ F + P G + + + + RD K ++ + Sbjct: 241 DEIPNAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKVVTEYNARHILVR 300 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 + E + LR+ Sbjct: 301 IGDNQTEAQAKAKIDTLRAR 320 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 41/155 (26%), Gaps = 3/155 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + Q + + +I + ++ Sbjct: 275 VEMRDANAGGEKKVVTEYNARHILVRIGDNQTEAQAKAKIDTLRARIVGGADFQATAKES 334 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + G + P F + + + + P+ TQ G + R Sbjct: 335 SEDTNSRGQGGDLGWFPADAFGPDFGKQVEGLTDGAVSEPFRTQAGWHIVQRVGTRQTDV 394 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +A + K+E+ Y+++LR A + Sbjct: 395 SAENQRAQIRETIGRRKLEEEYNRYLQELRGEAFV 429 >gi|166710727|ref|ZP_02241934.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 463 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 38/320 (11%), Positives = 105/320 (32%), Gaps = 17/320 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK- 67 ++ ++ + I I P+ S + RI ++ +V+ ++ + + +K Q Sbjct: 1 MTKPFSVVLASLLAITSTISPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYA 60 Query: 68 -------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + L++ ++ LI+ L+ + SGI +N A+ G + + Sbjct: 61 GRENQLPPDDVLQRQVLERLILVKLQVGRADGSGIRVSDEELNRAIASIAQQNGTTVDGL 120 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 L G+G F+ + + I + ++ + E E+ + + +L Sbjct: 121 RQKLAADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTALTQQAATGSKYHLA 180 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLLE 239 ++ + QK++ + + +++ + + G + Sbjct: 181 HILIGLPEGATAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSL 240 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQ 291 ++ F + P G + + + + RD K ++ + Sbjct: 241 DEIPNAFAQLIRDMKPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYNARHILVR 300 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 + E + +R+ Sbjct: 301 VGDNQTEAQAKAKIDTIRAR 320 Score = 92.4 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 18/157 (11%), Positives = 42/157 (26%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + Q + + +I + ++ Sbjct: 275 VEMRDANAGGEKKMVTEYNARHILVRVGDNQTEAQAKAKIDTIRARIVGGADFQATAKES 334 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + G + P F + + + + P+ TQ G + R Sbjct: 335 SEDTNSRGQGGDLGWFPADAFGPDFGKQVESLADGAVSEPFRTQAGWHIVQRVGSRQTDV 394 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +A + K+E+ Y+++LR A + Y Sbjct: 395 SAENQRAQVRETIGRRKLEEEYNRYLQELRGEAYVSY 431 >gi|330891199|gb|EGH23860.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. mori str. 301020] Length = 440 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 99/310 (31%), Gaps = 17/310 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ L Sbjct: 12 LMLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEAL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+E L+ Q E+SGI + +N A+ +S E F + L G+ N Sbjct: 72 QPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYN 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I V + + + E+ + I Sbjct: 132 DAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEEFHLANILIATPDS 191 Query: 193 QNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + +Q + + +S + + G + + L P F Sbjct: 192 ASSDAIQAAAVKAKGIYDQLKKGADFTQLAATSSSSENALEGGDMGWRKAAQLPPPFGDM 251 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAE 303 L + T P T G + + +KR G + ++ + + + E+ Sbjct: 252 LSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRNEEETKR 311 Query: 304 YVKKLRSNAI 313 +K+ Sbjct: 312 LAEKIYDRIQ 321 Score = 95.5 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 53/149 (35%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++N+ ++ + + + F+ + Sbjct: 282 QGQAQMRDEVHVRHILIKPSEIRNEEETKRLAEKIYDRIQNGEDFAELAKSFSEDPGSAL 341 Query: 230 SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAY 287 + G ++ + L P+F+ + + Q + P+ T G + + +R + A + Sbjct: 342 NGGDLNWVDPNSLVPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQ 401 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ +++++R A + Sbjct: 402 ALNVLRNRKYDEELQTWLRQIRDEAYVEI 430 >gi|330980962|gb|EGH79065.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 442 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 97/310 (31%), Gaps = 17/310 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ L Sbjct: 14 LMLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEAL 73 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+E L+ Q E+SGI +N A+ +S E F + L G+ N Sbjct: 74 QPQVLDRLILENLQLQMGERSGIRVSDEELNQAIGTIAQRNNMSVEQFRAALAHDGLSYN 133 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I V + + + E+ I Sbjct: 134 DAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDMGKAQLSEEFHLANILIATPDS 193 Query: 193 QNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + +Q + + +S + + G + + L P F Sbjct: 194 ASSDAIQAAAVKAKGIYDQLKKGADFTRLAATSSSSENALEGGDMGWRKAAQLPPPFGDM 253 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-----LSAQNTPTKIEKHEAE 303 L + T P T G + + +KR GE ++ + + + + E Sbjct: 254 LSSMPVGDVTPPARTPGGFIILKLLEKRGGQGEAQMRDEVHVRHILIKPSEIRNEAETKR 313 Query: 304 YVKKLRSNAI 313 +K+ Sbjct: 314 LAEKIYDRIQ 323 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 55/149 (36%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++N+ ++ + + + F+ + Sbjct: 284 QGEAQMRDEVHVRHILIKPSEIRNEAETKRLAEKIYDRIQNGEDFAELAKSFSEDPGSAL 343 Query: 230 SIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAY 287 + G ++ + L P+F+ ++ + Q + P+ TQ G + + +R + A + Sbjct: 344 NGGDLNWVDPNSLVPEFRQVMSETPQGVLSKPFQTQYGWHVLEVLGRRSKDATDQAREQQ 403 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ +++++R A + Sbjct: 404 ALNVLRNRKYDEELQTWLRQIRDEAYVEI 432 >gi|289676168|ref|ZP_06497058.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. syringae FF5] gi|330938460|gb|EGH42067.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. pisi str. 1704B] Length = 440 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 97/310 (31%), Gaps = 17/310 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ L Sbjct: 12 LMLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEAL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+E L+ Q E+SGI +N A+ +S E F + L G+ N Sbjct: 72 QPQVLDRLILENLQLQMGERSGIRVSDEELNQAIGTIAQRNNMSVEQFRAALAHDGLSYN 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I V + + + E+ I Sbjct: 132 DAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDMGKAQLSEEFHLANILIATPDS 191 Query: 193 QNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + +Q + + +S + + G + + L P F Sbjct: 192 ASSDAIQAAAVKAKGIYDQLKKGADFTRLAATSSSSENALEGGDMGWRKAAQLPPPFGDM 251 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-----LSAQNTPTKIEKHEAE 303 L + T P T G + + +KR GE ++ + + + + E Sbjct: 252 LSSMPVGDVTPPARTPGGFIILKLLEKRGGQGEAQMRDEVHVRHILIKPSEIRNEAETKR 311 Query: 304 YVKKLRSNAI 313 +K+ Sbjct: 312 LAEKIYDRIQ 321 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 55/149 (36%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++N+ ++ + + + F+ + Sbjct: 282 QGEAQMRDEVHVRHILIKPSEIRNEAETKRLAEKIYDRIQNGEDFAELAKSFSEDPGSAL 341 Query: 230 SIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAY 287 + G ++ + L P+F+ ++ + Q + P+ TQ G + + +R + A + Sbjct: 342 NGGDLNWVDPNSLVPEFRQVMSETPQGVLSKPFQTQYGWHVLEVLGRRSKDATDQAREQQ 401 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ +++++R A + Sbjct: 402 ALNVLRNRKYDEELQTWLRQIRDEAYVEI 430 >gi|58583369|ref|YP_202385.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae KACC10331] gi|188575375|ref|YP_001912304.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae PXO99A] gi|75508083|sp|Q5GWC1|SURA_XANOR RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|58427963|gb|AAW77000.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae KACC10331] gi|188519827|gb|ACD57772.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 463 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 38/320 (11%), Positives = 105/320 (32%), Gaps = 17/320 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK- 67 ++ ++ + I I P+ S + RI ++ +V+ ++ + + +K Q Sbjct: 1 MTKPFSVVLASLLAITSTISPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYA 60 Query: 68 -------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + L++ ++ LI+ L+ + SGI +N A+ G + + Sbjct: 61 GRENQLPPDDVLQRQVLERLILVKLQVGRADGSGIRVSDEELNRAIASIAQQNGTTVDGL 120 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 L G+G F+ + + I + ++ + E E+ + + +L Sbjct: 121 RQKLAADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTALTQQAATGSKYHLA 180 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLLE 239 ++ + QK++ + + +++ + + G + Sbjct: 181 HILIGLPEGATAEQIATGQKKVDGVKALIDKGELDFPAAAVRYSDSPNALEGGDLGWRSL 240 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQ 291 ++ F + P G + + + + RD K ++ + Sbjct: 241 DEIPNAFAQLIRDMKPGQVAGPLRGPSGFQLLKLMEMRDANAGGEKKMVTEYNARHILVR 300 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 + E + +R+ Sbjct: 301 VGDNQTEAQAKAKIDTIRAR 320 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 18/156 (11%), Positives = 41/156 (26%), Gaps = 3/156 (1%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + Q + + +I + ++ + Sbjct: 276 EMRDANAGGEKKMVTEYNARHILVRVGDNQTEAQAKAKIDTIRARIVGGADFQATAKESS 335 Query: 224 SKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 G + P F + + + + P+ TQ G + R Sbjct: 336 EDTNSRGQGGDLGWFPADAFGPDFGKQVEGLADGAVSEPFRTQAGWHIVQRVGSRQTDVS 395 Query: 282 -IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +A + K+E+ Y+++LR A + Y Sbjct: 396 AENQRAQVRETIGRRKLEEEYNRYLQELRGEAYVSY 431 >gi|320326011|gb|EFW82069.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. glycinea str. B076] gi|330985794|gb|EGH83897.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. lachrymans str. M301315] Length = 440 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 99/310 (31%), Gaps = 17/310 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ L Sbjct: 12 LMLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEAL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+E L+ Q E+SGI + +N A+ +S E F + L G+ N Sbjct: 72 QPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYN 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I V + + + E+ + I Sbjct: 132 DAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEEFHLANILIATPDS 191 Query: 193 QNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + +Q + + +S + + G + + L P F Sbjct: 192 ASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMGWRKAAQLPPPFGDM 251 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAE 303 L + T P T G + + +KR G + ++ + + + E+ Sbjct: 252 LSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRNEEETKR 311 Query: 304 YVKKLRSNAI 313 +K+ Sbjct: 312 LAEKIYDRIQ 321 Score = 95.9 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 53/149 (35%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++N+ ++ + + + F+ + Sbjct: 282 QGQAQMRDEVHVRHILIKPSEIRNEEETKRLAEKIYDRIQNGEDFAELAKSFSEDPGSAL 341 Query: 230 SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAY 287 + G ++ + L P+F+ + + Q + P+ T G + + +R + A + Sbjct: 342 NGGDLNWVDPNSLVPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQ 401 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ +++++R A + Sbjct: 402 ALNVLRNRKYDEELQTWLRQIRDEAYVEI 430 >gi|320332054|gb|EFW87990.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. glycinea str. race 4] Length = 440 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 99/310 (31%), Gaps = 17/310 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ L Sbjct: 12 LMLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEAL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+E L+ Q E+SGI + +N A+ +S E F + L G+ N Sbjct: 72 QPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYN 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I V + + + E+ + I Sbjct: 132 DAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEKFHLANILIATPDS 191 Query: 193 QNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + +Q + + +S + + G + + L P F Sbjct: 192 ASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMGWRKAAQLPPPFGDM 251 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAE 303 L + T P T G + + +KR G + ++ + + + E+ Sbjct: 252 LSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRNEEETKR 311 Query: 304 YVKKLRSNAI 313 +K+ Sbjct: 312 LAEKIYDRIQ 321 Score = 95.9 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 53/149 (35%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++N+ ++ + + + F+ + Sbjct: 282 QGQAQMRDEVHVRHILIKPSEIRNEEETKRLAEKIYDRIQNGEDFAELAKSFSEDPGSAL 341 Query: 230 SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAY 287 + G ++ + L P+F+ + + Q + P+ T G + + +R + A + Sbjct: 342 NGGDLNWVDPNSLVPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQ 401 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ +++++R A + Sbjct: 402 ALNVLRNRKYDEELQTWLRQIRDEAYVEI 430 >gi|289663554|ref|ZP_06485135.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 463 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 38/320 (11%), Positives = 105/320 (32%), Gaps = 17/320 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK- 67 ++ ++ + I I P+ S + RI ++ +V+ ++ + + +K Q Sbjct: 1 MTKPFSVVLASLLAITSTISPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYA 60 Query: 68 -------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + L++ ++ LI+ L+ + SGI +N A+ G + + Sbjct: 61 GRENQLPPDDVLQRQVLERLILVKLQVGRADGSGIRVSDEELNRAIASIAQQNGTTVDGL 120 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 L G+G F+ + + I + ++ + E E+ + + +L Sbjct: 121 RQKLAADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTALAQQAATGSQYHLA 180 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLLE 239 ++ + QK++ + + +++ + + G + Sbjct: 181 HILIGLPEGATAEQIATGQKKVDGVKALIDKGELDFPAAAVRYSDSPNALEGGDLGWRSL 240 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQ 291 ++ F + P G + + + + RD K ++ + Sbjct: 241 DEIPNAFAQLIRDMKPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYNARHILVR 300 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 + E + +R+ Sbjct: 301 VGDNQTEAQAKAKIDTIRAR 320 Score = 92.4 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 18/157 (11%), Positives = 42/157 (26%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + Q + + +I + ++ Sbjct: 275 VEMRDANAGGEKKMVTEYNARHILVRVGDNQTEAQAKAKIDTIRARIVGGADFQATAKES 334 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + G + P F + + + + P+ TQ G + R Sbjct: 335 SEDTNSRGQGGDLGWFPADAFGPDFGKQVEGLADGAVSEPFRTQAGWHIVQRVGSRQTDV 394 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +A + K+E+ Y+++LR A + Y Sbjct: 395 SAENQRAQVRETIGRRKLEEEYNRYLQELRGEAYVSY 431 >gi|86749597|ref|YP_486093.1| hypothetical protein RPB_2477 [Rhodopseudomonas palustris HaA2] gi|86572625|gb|ABD07182.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 309 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 60/306 (19%), Positives = 122/306 (39%), Gaps = 4/306 (1%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K F + C V S A + + +NGE IT+ DI +R L KL Sbjct: 4 KFSFRIFAAALCCAVASWSGIGLARAQSVAVMVNGEPITNFDIEQRSKLDKLSNQ-SRTR 62 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + + ELI E +K +E +K G+ + ++ F + +S + L QGI Sbjct: 63 QQVLDELIDEKVKIREGKKFGVNPSDSDIDSSFASMSSRMRMSPDQMVKMLAAQGIRPGT 122 Query: 134 FKQYLAIQSIWPDVVKNDFMLK--YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 K + + +W +V+ F G +++ + + + E + + Sbjct: 123 LKSKIKAEMVWTSLVRGRFKDSLLVGEKDIQAQLAAKGGDDKSTTESFEYQMRPVVLIVS 182 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + + + E+ + C ++ + + +I +DL P + +L Sbjct: 183 RGSGAGAVEARRKEAEALRSRVQSCADADRIFKALPNAAIRATVVKTSADLPPALREILD 242 Query: 252 KSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 K+ T P T++GVE +A+C ++ + +K + + K + +Y+++ R+ Sbjct: 243 KTPVGQMTAPEATKQGVEMVALCSRKPTTADTPMKREIREKMYAEKFQAKSKDYLRESRN 302 Query: 311 NAIIHY 316 A+I Y Sbjct: 303 AAMIEY 308 >gi|320354702|ref|YP_004196041.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfobulbus propionicus DSM 2032] gi|320123204|gb|ADW18750.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfobulbus propionicus DSM 2032] Length = 327 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 105/323 (32%), Gaps = 23/323 (7%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-----------KRIALLKL 65 F L+ C+V + + + + R +N + IT +++ + +L Sbjct: 4 RILFFLVSICLVFVSAASNANVVDRSVAIVNNDTITLSEVNELGRSFFKKVTEETPADRL 63 Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 + + + +LI + L QE +K GI V+ + N + E F L Sbjct: 64 PEALQQARNTVIDKLIDKKLLVQEAKKLGIQVSDQEVDNALQRVLANNKATMEQFHKELL 123 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 G+ + +K+ L Q + ++ ++ K E +I Q V + Sbjct: 124 AMGMTEKQYKEELRDQILSSKLINHEVRTKVVIPEEKILEYYQSNYTRQVGGGELHLQQI 183 Query: 186 SIPDNKL------QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + +Q +++I+ A E +K++ G Sbjct: 184 GCTWGEPLANGVVPSQDDAKEKIRKAYEKAKDGDDFNELAKKYSDLPSAEDGGDLGTFQL 243 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR-----DLGGEIALKAYLSAQNT 293 +L P Q + + + G + + + A+K + + Sbjct: 244 HELAPAMQQAVAQLKSGEISPVVQIDNGYHFFKLVSSQGGATVSKADYEAVKEEIRERLY 303 Query: 294 PTKIEKHEAEYVKKLRSNAIIHY 316 +E ++VK +R A I Sbjct: 304 KQAMEARFKDWVKSIRDKAYIKI 326 >gi|301382733|ref|ZP_07231151.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. tomato Max13] gi|302063472|ref|ZP_07255013.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. tomato K40] Length = 440 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 105/313 (33%), Gaps = 19/313 (6%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ +L Sbjct: 12 LMLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMGQRVREVQQTIAKRGSGVPPAADL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+E L+ Q E+SGI + +N A+ +S E F + L G+ Sbjct: 72 QPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYE 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I V + + E E+ + I Sbjct: 132 DAREQVRREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSEEFHLANILIATPDS 191 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + +Q A+ +L K + + +S + + G + + L P F Sbjct: 192 ASSDAIQAAAVKAKSIYDQLKKGADFAKIAATTSSSENALEGGDMGWRKAAQLPPPFGDM 251 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAE 303 L + T P T G + + +KR G + ++ + + + E+ Sbjct: 252 LSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRSEEATKL 311 Query: 304 YVKKLRSNAIIHY 316 +K+ I Sbjct: 312 LAQKIYER--IEN 322 Score = 93.2 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 15/149 (10%), Positives = 52/149 (34%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++++ + + E + F+ + Sbjct: 282 QGQAQMRDEVHVRHILIKPSEIRSEEATKLLAQKIYERIENGEDFATLAKSFSEDPGSAL 341 Query: 230 SIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-Y 287 + G ++ + L P+F++++ Q + P+ T G + + +R + Sbjct: 342 NGGDLNWVDPNSLVPEFRDVMSSTPQGELSKPFKTAYGWHVLEVLGRRATDATGQARDQQ 401 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K ++ +++++R A + Sbjct: 402 ALSVLRNRKYDEELQTWLRQIRDEAYVEI 430 >gi|325917324|ref|ZP_08179542.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas vesicatoria ATCC 35937] gi|325536458|gb|EGD08236.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas vesicatoria ATCC 35937] Length = 463 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 36/320 (11%), Positives = 104/320 (32%), Gaps = 17/320 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK- 67 ++ +L ++I + P+ S + RI ++ +V+ ++ + + +K Q Sbjct: 1 MTKPFSVLLASLLVITSTVSPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYA 60 Query: 68 -------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + L++ ++ L++ L+ + SGI +N A+ G + + Sbjct: 61 GRENQLPPDDVLQRQVLERLVLVKLQVGRADGSGIRVSDEELNRAIASIAQQNGTTVDGL 120 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 L G+ F+ + + I + ++ + E E+ + + +L Sbjct: 121 RQKLAADGMAYGDFRSSVRDEIIVQRLRQSFAQSRISVSEGEVDTALAQQATTGSQYHLA 180 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLLE 239 ++ QK++ + + +++ + + G + Sbjct: 181 HILVGLPEGATADQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSL 240 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQ 291 ++ F + P G + + + + RD K ++ + Sbjct: 241 DEIPNAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYNARHILVR 300 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 + + + LR+ Sbjct: 301 IGDNQTDAQAKAKIDTLRAR 320 Score = 93.6 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 17/157 (10%), Positives = 43/157 (27%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + Q + +I + ++ Sbjct: 275 VEMRDANAGGEKKMVTEYNARHILVRIGDNQTDAQAKAKIDTLRARIAGGAEFQATAKES 334 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIA-ICDKRDLG 279 + G + P F + + + + P+ TQ G + + ++ Sbjct: 335 SEDTNSRGQGGDLGWFPADAFGPDFGKQVEGLADGAVSEPFRTQAGWHIVQRVGSRQTDI 394 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +A + K+E+ Y+++LR A + Y Sbjct: 395 SAENQRAQIRETIGRRKLEEEYNRYLQELRGEAYVSY 431 >gi|84625193|ref|YP_452565.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|121956520|sp|Q2NZI6|SURA_XANOM RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|84369133|dbj|BAE70291.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 463 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 38/320 (11%), Positives = 105/320 (32%), Gaps = 17/320 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK- 67 ++ ++ + I I P+ S + RI ++ +V+ ++ + + +K Q Sbjct: 1 MTKPFSVVLASLLAITSTISPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYA 60 Query: 68 -------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + L++ ++ LI+ L+ + SGI +N A+ G + + Sbjct: 61 GRENQLPPDDVLQRQVLERLILVKLQVGRADGSGIRVSDEELNRAIASIAQQNGTTVDGL 120 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 L G+G F+ + + I + ++ + E E+ + + +L Sbjct: 121 RQKLAADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTALTQQAATGSKYHLA 180 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLLE 239 ++ + QK++ + + +++ + + G + Sbjct: 181 HILIGLPEGATAEQIATGQKKVDGVKTLIDKGELDFPAAAVRYSDSPNALEGGDLGWRSL 240 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQ 291 ++ F + P G + + + + RD K ++ + Sbjct: 241 DEIPNAFAQLIRDMKPGQVAGPLRGPSGFQLLKLMEMRDANAGGEKKMVTEYNARHILVR 300 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 + E + +R+ Sbjct: 301 VGDNQTEAQAKAKIDTIRAR 320 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 18/156 (11%), Positives = 41/156 (26%), Gaps = 3/156 (1%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + Q + + +I + ++ + Sbjct: 276 EMRDANAGGEKKMVTEYNARHILVRVGDNQTEAQAKAKIDTIRARIVGGADFQATAKESS 335 Query: 224 SKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 G + P F + + + + P+ TQ G + R Sbjct: 336 EDTNSRGQGGDLGWFPADAFGPDFGKQVEGLADGAVSEPFRTQAGWHIVQRVGSRQTDVS 395 Query: 282 -IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +A + K+E+ Y+++LR A + Y Sbjct: 396 AENQRAQVRETIGRRKLEEEYNRYLQELRGEAYVSY 431 >gi|331011659|gb|EGH91715.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 440 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 99/310 (31%), Gaps = 17/310 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ L Sbjct: 12 LMLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEAL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+E L+ Q E+SGI + +N A+ +S E F + L G+ N Sbjct: 72 QPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYN 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I V + + + E+ + I Sbjct: 132 DAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEEFHLANILIATPDS 191 Query: 193 QNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + +Q + + +S + + G + + L P F Sbjct: 192 ASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMGWRKAAQLPPPFGDM 251 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAE 303 L + T P T G + + +KR G + ++ + + + E+ Sbjct: 252 LSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRNEEETKR 311 Query: 304 YVKKLRSNAI 313 +K+ Sbjct: 312 LAEKIYDRIQ 321 Score = 95.9 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 53/149 (35%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++N+ ++ + + + F+ + Sbjct: 282 QGQAQMRDEVHVRHILIKPSEIRNEEETKRLAEKIYDRIQNGEDFAELAKSFSEDPGSAL 341 Query: 230 SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAY 287 + G ++ + L P+F+ + + Q + P+ T G + + +R + A + Sbjct: 342 NGGDLNWIDPNSLVPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQ 401 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ +++++R A + Sbjct: 402 ALNVLRNRKYDEELQTWLRQIRDEAYVEI 430 >gi|257483108|ref|ZP_05637149.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 442 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 99/310 (31%), Gaps = 17/310 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ L Sbjct: 14 LMLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEAL 73 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+E L+ Q E+SGI + +N A+ +S E F + L G+ N Sbjct: 74 QPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYN 133 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I V + + + E+ + I Sbjct: 134 DAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEEFHLANILIATPDS 193 Query: 193 QNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + +Q + + +S + + G + + L P F Sbjct: 194 ASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMGWRKAAQLPPPFGDM 253 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAE 303 L + T P T G + + +KR G + ++ + + + E+ Sbjct: 254 LSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRNEEETKR 313 Query: 304 YVKKLRSNAI 313 +K+ Sbjct: 314 LAEKIYDRIQ 323 Score = 95.9 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 53/149 (35%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++N+ ++ + + + F+ + Sbjct: 284 QGQAQMRDEVHVRHILIKPSEIRNEEETKRLAEKIYDRIQNGEDFAELAKSFSEDPGSAL 343 Query: 230 SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAY 287 + G ++ + L P+F+ + + Q + P+ T G + + +R + A + Sbjct: 344 NGGDLNWIDPNSLVPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQ 403 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ +++++R A + Sbjct: 404 ALNVLRNRKYDEELQTWLRQIRDEAYVEI 432 >gi|110834907|ref|YP_693766.1| survival protein SurA [Alcanivorax borkumensis SK2] gi|122070614|sp|Q0VMV4|SURA_ALCBS RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|110648018|emb|CAL17494.1| Survival protein surA precursor (Peptidyl-prolyl cis-trans isomerase surA) [Alcanivorax borkumensis SK2] Length = 435 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 105/306 (34%), Gaps = 17/306 (5%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M +K + K + + ++P+ S M RI +N I ++ +RI Sbjct: 1 MINKTLHT-----KHTLLGLLAMAVLMIPVWSQAKVQMLDRIVAVVNDGAIMASELDERI 55 Query: 61 ALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + LQ L + + +I+E L+ Q E++GI D ++N AR Sbjct: 56 NTIALQFQEKGQQLPSPAILREQVLDRMILERLQLQLAERAGIKVDEASLNEALAGIARQ 115 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 +S EDF++ L + G F++ + + + + + + E+ Sbjct: 116 NDMSLEDFAATLREDGYSWTQFREQIRQDMVISRLQQRSVASRIQITDREVDRFLSSELG 175 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDV 229 + + R I + + A+E RL + + + + Sbjct: 176 KQMFQEDFRLGHILIRVPSEARPQQISQARAKAKEIIERLEAGSDFQQLAIALSDGPNAL 235 Query: 230 SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 G + + F +N + + + P + G + + D++ ++ + ++ Sbjct: 236 EGGDLGWRPAAQWPTLFAENAINLKKGEFSQPLRSGAGFHILKMIDRKGGAEKVVTQYHV 295 Query: 289 SAQNTP 294 Sbjct: 296 RHVLIK 301 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 31/279 (11%), Positives = 84/279 (30%), Gaps = 19/279 (6%) Query: 51 ITDGDISKRIAL-LKLQKINGELE---------KIAVQELIVETLKKQEIEKSGITFDSN 100 ITD ++ + ++ L Q + A + I + K + + S+ Sbjct: 161 ITDREVDRFLSSELGKQMFQEDFRLGHILIRVPSEARPQQISQARAKAKEIIERLEAGSD 220 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 L D Q + + +++ Sbjct: 221 FQQLAIALSDGPNALEGGDLGWRPAAQWPTLFAENAINLKKGEFSQPLRSGAGFHI---- 276 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + +K V + D + Q+ I+ +E + Sbjct: 277 --LKMIDRKGGAEKVVTQYHVRHVLIKADALTSAEQAQQRAIRLHDEVAAGKRQFKETAA 334 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDL 278 +F+ + G+ ++ + ++ P+F+ ++ + + + +Q G ++ + D RD Sbjct: 335 EFSDDPGSARNGGELGWVNKGEMVPEFEQVMLNTPVGELSPVFESQFGWHFLRVDDIRDA 394 Query: 279 GGEIALKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + E+ +V++ RS + + Sbjct: 395 DMSTEFRRMQATQALQKRRFEEELETWVQEKRSESYVDI 433 >gi|325276043|ref|ZP_08141858.1| SurA domain-containing protein [Pseudomonas sp. TJI-51] gi|324098828|gb|EGB96859.1| SurA domain-containing protein [Pseudomonas sp. TJI-51] Length = 428 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 106/309 (34%), Gaps = 16/309 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ + + R+ ++ +V+ + +R+ ++ G L Sbjct: 1 MLLGVALLSGAVHAAVQPLDRVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGSVPPAGAL 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 E+ ++ LIVE L+ Q E+SGI +N A+ G+S + F + L G+ + Sbjct: 61 EQQVLERLIVENLQLQIGERSGIRITDEELNQAIGTIAQRNGMSLDQFRAALAHDGLSFD 120 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + + I V + + E E+ R IP + Sbjct: 121 DARDQVKREMIISRVRQRRVAERIQVSEQEVKNFLNSDMGKMQMSEEYRLANILIPTPEA 180 Query: 193 QNQGFVQKRIK---DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 N +QK + + + + ++ + + G+ + + L P F + Sbjct: 181 ANSADIQKAARQVGEVYQQLKQGADFGQLAIARSASENALEGGEMGWRKAAQLPPDFAKM 240 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG----EIALKAYLSAQNTPTKIEKHEAEY 304 L T P G + + +KR + ++ + + + + + Sbjct: 241 LSSMPVGEITQPIRIPNGFIILKLEEKRGGSENVLRDEVHVRHILIKPSEIRSDAATEQL 300 Query: 305 VKKLRSNAI 313 ++L Sbjct: 301 AERLYERIK 309 Score = 92.8 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 26/274 (9%), Positives = 84/274 (30%), Gaps = 9/274 (3%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELI-----VETLKKQEIEKSGITFDSNTVNYF 105 +++ ++ + + E ++A LI + Q+ + Sbjct: 146 VSEQEVKNFLNSDMGKMQMSEEYRLA-NILIPTPEAANSADIQKAARQVGEVYQQLKQGA 204 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 ++E+ + A V + ++ N + + Sbjct: 205 DFGQLAIARSASENALEGGEMGWRKAAQLPPDFAKMLSSMPVGEITQPIRIPNGFIILKL 264 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 +++ + V + I +++++ ++ + E + ++ Sbjct: 265 EEKRGGSENVLRDEVHVRHILIKPSEIRSDAATEQLAERLYERIKNGEDFAELAKSYSED 324 Query: 226 I-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 ++ G ++ + L P+F+ + Q T P+ TQ G + + +R Sbjct: 325 PGSALNGGDLNWVDPNSLVPEFREQMANAQQGVVTKPFKTQYGWHVLEVLGRRATDSTEQ 384 Query: 284 LKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K ++ +++++R A + Sbjct: 385 AREQQALNVLRNRKYDEELQTWLRQIRDEAYVEI 418 >gi|289670942|ref|ZP_06492017.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 463 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 36/320 (11%), Positives = 104/320 (32%), Gaps = 17/320 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK- 67 ++ ++ + I + P S + RI ++ +V+ ++ + + +K Q Sbjct: 1 MTKPFSVVLASLLAITSTVSPFASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYA 60 Query: 68 -------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + L++ ++ L++ L+ + SGI +N A+ G + + Sbjct: 61 GRENQLPPDDVLQRQVLERLVLVKLQVGRADGSGIRVSDEELNRAIASIAQQNGTTVDGL 120 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 L G+G F+ + + I + ++ + E E+ + + +L Sbjct: 121 RQKLAADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTALAQQAATGSQYHLA 180 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLLE 239 ++ + QK++ + + +++ + + G + Sbjct: 181 HILIGLPEGATAEQIATGQKKVDGVKALIDKGELDFPAAAVRYSDSPNALEGGDLGWRSL 240 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQ 291 ++ F + P G + + + + RD K ++ + Sbjct: 241 DEIPNAFAQLIRDMKPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYNARHILVR 300 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 + E + +R+ Sbjct: 301 VGDNQTEAQAKAKIDTIRAR 320 Score = 92.8 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 18/157 (11%), Positives = 42/157 (26%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + Q + + +I + ++ Sbjct: 275 VEMRDANAGGEKKMVTEYNARHILVRVGDNQTEAQAKAKIDTIRARIVGGADFQATAKES 334 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + G + P F + + + + P+ TQ G + R Sbjct: 335 SEDTNSRGQGGDLGWFPADAFGPDFGKQVEGLADGAVSEPFRTQAGWHIVQRVGSRQTDV 394 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +A + K+E+ Y+++LR A + Y Sbjct: 395 SAENQRAQVRETIGRRKLEEEYNRYLQELRGEAYVSY 431 >gi|78046458|ref|YP_362633.1| peptidylprolyl isomerase precursor [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325928237|ref|ZP_08189442.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas perforans 91-118] gi|121956510|sp|Q3BX80|SURA_XANC5 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|78034888|emb|CAJ22533.1| peptidylprolyl isomerase precursor [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325541397|gb|EGD12934.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas perforans 91-118] Length = 463 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 35/320 (10%), Positives = 105/320 (32%), Gaps = 17/320 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK- 67 ++ ++ + I + P+ S + RI ++ +V+ ++ + + +K Q Sbjct: 1 MTKPFSVVLASLLAITSTVSPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYA 60 Query: 68 -------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + L++ ++ L++ L+ + +GI +N A+ G + + Sbjct: 61 GRENQLPPDDVLQRQVLERLVLVKLQVSRADGNGIRVSDEELNRAIASIAQQNGTTVDGL 120 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 L G+G F+ + + I + ++ + E E+ + + +L Sbjct: 121 RQKLAADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTALAQQAATGSQYHLA 180 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLLE 239 ++ + QK++ + + +++ + + G + Sbjct: 181 HILIGLPEGATAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSL 240 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQ 291 ++ F + P G + + + + RD K ++ + Sbjct: 241 DEIPNAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYHARHILVR 300 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 + E + +R+ Sbjct: 301 IGENQTEAQAKAKIDTIRAR 320 Score = 93.2 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 18/157 (11%), Positives = 43/157 (27%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + Q + + +I + ++ Sbjct: 275 VEMRDANAGGEKKMVTEYHARHILVRIGENQTEAQAKAKIDTIRARIVGGADFQATAKES 334 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + G + P F + + + + P+ TQ G + R Sbjct: 335 SEDTNSRGQGGDLGWFPADAFGPDFGKQVESLTDGAVSEPFRTQAGWHIVQRVGSRQTDV 394 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +A + K+E+ Y+++LR A + Y Sbjct: 395 SAENQRAQVRETIGRRKLEEEYNRYLQELRGEAYVSY 431 >gi|330719900|gb|EGG98375.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) [gamma proteobacterium IMCC2047] Length = 429 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 112/314 (35%), Gaps = 16/314 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-------- 60 L+ K TT +L C+ P + Y + RI +N ++I + + I Sbjct: 2 LNSLRKYFTT--LLAALCLAPSMLYAAIQPLDRIAVIVNDDIIMQSQVQQAIDSAIRNLQ 59 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + L + V+ LI+E+L+ Q E+ GI D ++N + A ++ E F Sbjct: 60 QRNQQMPPKKVLIQQVVESLIMESLQLQIAERGGIRVDDTSLNEAISRIAAQNNMTLEQF 119 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREY 178 + +G ++ + + + + + + EI + ++ Sbjct: 120 QQAIIAEGSDYAATREQIRRELLTTRARQGSVGPRIQITDQEIDNFLDSAEGKALLASKF 179 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 I +L +N + +K+ + + ++++ + G + Sbjct: 180 HIAHILVKPDNNTQPARQKAKKQAQALYQQLQSGADFAALTKQYSDGPNAEQGGSMGWRD 239 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTP 294 ES L F+N +K + + P + G + + +KR + ++ Q Sbjct: 240 ESQLPSLFKNTVKALNDGEVSEPIASSNGFHLVKLLEKRGGTSIIQDQTQVRHILIQPNE 299 Query: 295 TKIEKHEAEYVKKL 308 + E+ E + L Sbjct: 300 IRSERQAEEMIYDL 313 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 16/141 (11%), Positives = 52/141 (36%), Gaps = 3/141 (2%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 + I N+++++ ++ I D +++ G+ ++ Sbjct: 287 QTQVRHILIQPNEIRSERQAEEMIYDLFTRIQSGEDFAELARLYSADPGSRAKGGELGWI 346 Query: 238 LESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPT 295 + L P F + + + + + P+ ++ G + + +R G A + Sbjct: 347 TPAGLVPSFVKVMKETPVDGISAPFKSRYGWHILEVQGRRQQDIGADAARQQAREVIYRR 406 Query: 296 KIEKHEAEYVKKLRSNAIIHY 316 K + +++++R++A + Sbjct: 407 KFNEELQLWLREIRNDAFVDI 427 >gi|121956435|sp|Q88QT4|SURA_PSEPK RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor Length = 427 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 102/305 (33%), Gaps = 16/305 (5%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEKIA 76 ++ + + R+ ++ +V+ + +R+ ++ LE+ Sbjct: 4 VALLSGAVHAAVQPLDRVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGVPPTSALEQQV 63 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 ++ LIVE L+ Q E+SGI +N A+ G+S + F + L + G+ + ++ Sbjct: 64 LERLIVENLQLQIGERSGIRITDEELNQAIGTIAQRNGMSLDQFRAALARDGLSFDDARE 123 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR---TVLFSIPDNKLQ 193 + + I V + + E E+ R ++ + Sbjct: 124 QVKREMIISRVRQRRVAERIQVSEQEVKNFLASDLGKMQMSEEYRLANILIPTPEAANSD 183 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 + +++ D + + ++ + + G+ + L P F +L Sbjct: 184 DIQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGWRKAGQLPPDFAKMLSSM 243 Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGG----EIALKAYLSAQNTPTKIEKHEAEYVKKL 308 T P G + + +KR + ++ + + + E + ++L Sbjct: 244 PVGEITQPIRIPNGFIILKLEEKRGGSENVLRDEVHVRHILIKPSEIRSEAATEQLAERL 303 Query: 309 RSNAI 313 Sbjct: 304 YDRIK 308 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 22/233 (9%), Positives = 72/233 (30%), Gaps = 3/233 (1%) Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 Q+ + ++E+ + A Sbjct: 185 IQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGWRKAGQLPPDFAKMLSSMP 244 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V + ++ N + + +++ + V + I ++++++ ++ + Sbjct: 245 VGEITQPIRIPNGFIILKLEEKRGGSENVLRDEVHVRHILIKPSEIRSEAATEQLAERLY 304 Query: 207 ESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQ 264 + + F+ ++ G ++ + L P+F+ + Q T P+ TQ Sbjct: 305 DRIKNGEDFGELAKSFSEDPGSALNGGDLNWVDPNSLVPEFREQMANAQQGVVTKPFKTQ 364 Query: 265 KGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G + + +R + + K ++ +++++R A + Sbjct: 365 YGWHVLEVLGRRATDSTEQAREQQALSVLRNRKYDEELQTWLRQIRDEAYVEI 417 >gi|71275093|ref|ZP_00651380.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Dixon] gi|71899689|ref|ZP_00681842.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Ann-1] gi|170731077|ref|YP_001776510.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa M12] gi|71163902|gb|EAO13617.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Dixon] gi|71730557|gb|EAO32635.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Ann-1] gi|167965870|gb|ACA12880.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa M12] Length = 468 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 112/325 (34%), Gaps = 24/325 (7%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISKRIALLKLQ 66 ++ + ++ + + + +P+ S + RI ++ V+ ++ + I +K Q Sbjct: 1 MTRYFSIVLSLLLAVSCVFLPVASARQQQHQPLDRIVAVVDDNVVLKSELDRAIHNVKSQ 60 Query: 67 K--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 + L++ ++ LI+ L+ + +GI + +N A N S + Sbjct: 61 YVGHEGQLPPDEVLQRQVLERLILIKLQVARAQTNGIRVSDDELNQAISSIAENNKTSVD 120 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 L +GI F+Q + + + + + E E+ + + +Y Sbjct: 121 GLRQKLVAEGISFPEFRQSVRDEITVHHLRQGFAQSRIVVSEGEVDTAL--AQANSGAQY 178 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK--FASKIHDVSIGKAQY 236 ++ +L ++PD Q V ++ + +S + + ++ + + G + Sbjct: 179 HLQHILVALPDGATSEQIAVAQKKINGIKSVIDKGELAFSAAAVRYSDSPNALESGDLGW 238 Query: 237 LLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRD---------LGGEIALKA 286 ++ F + P G + + + + RD Sbjct: 239 RSLDEIPEAFAQMVQTMKPGQIVGPLRGTSGFQLLKLVEVRDSAAAAAGPRQMATEYHAR 298 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ + T + E + LR+ Sbjct: 299 HILVRITEKQKEAQAKAKIDTLRAR 323 Score = 86.3 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 18/156 (11%), Positives = 47/156 (30%), Gaps = 3/156 (1%) Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 E+ + + + Q + + +I + Sbjct: 277 EVRDSAAAAAGPRQMATEYHARHILVRITEKQKEAQAKAKIDTLRARIAGGADFQTVARE 336 Query: 222 FASKIHDVS-IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG 279 + ++ + G + F N +K + N + P+ + G + R Sbjct: 337 SSEDANNSNQGGDLGWFPSDAFGADFGNHVKALADGNVSEPFRSAAGWHIVQRLGTRQTD 396 Query: 280 G-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + +A + K+E+ ++++LRS A + Sbjct: 397 VTKENQRAQIRDTIGQRKLEESYERFLRELRSEAYV 432 >gi|28199704|ref|NP_780018.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Temecula1] gi|182682448|ref|YP_001830608.1| SurA domain-containing protein [Xylella fastidiosa M23] gi|81724959|sp|Q87AJ0|SURA_XYLFT RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|28057825|gb|AAO29667.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Temecula1] gi|182632558|gb|ACB93334.1| SurA domain [Xylella fastidiosa M23] gi|307578730|gb|ADN62699.1| SurA domain-containing protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 463 Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 112/324 (34%), Gaps = 23/324 (7%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISKRIALLKLQ 66 ++ + ++ + + + +P+ S + RI ++ V+ ++ + I +K Q Sbjct: 1 MTRYFSIVLSLLLAVSCVFLPVASARQQQHQPLDRIVAVVDDNVVLKSELDRAIHNVKSQ 60 Query: 67 K--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 + L++ ++ LI+ L+ + +GI + +N A N S + Sbjct: 61 YVGHEGQLPPDEVLQRQVLERLILIKLQVARAQTNGIRVSDDELNQAISSIAENNKTSVD 120 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 L +GI F+Q + + + + + E E+ + + +Y Sbjct: 121 GLRQKLVAEGISFPEFRQSVRDEITVHHLRQGFAQSRIVVSEGEVDTAL--AQANSGAQY 178 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK--FASKIHDVSIGKAQY 236 ++ +L S+PD Q + ++ + +S + + ++ + + G + Sbjct: 179 HLQHILVSLPDGATSEQIAIAQKKINGIKSVIDKGELAFSAAAVRYSDSPNALESGDLGW 238 Query: 237 LLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG--------GEIALKAY 287 ++ F + P G + + + + RD + Sbjct: 239 RSLDEIPEAFAQMVQTMKPGQIVGPLRGTSGFQLLKLVEVRDSTAAAGPRQMATEYHARH 298 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSN 311 + + T + E + LR+ Sbjct: 299 ILVRITDKQKEAQAKAKIDTLRAR 322 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 42/138 (30%), Gaps = 3/138 (2%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLL 238 + Q + + +I + + ++ + G + Sbjct: 294 YHARHILVRITDKQKEAQAKAKIDTLRARIAGGADFQTVARESSEDANNSNQGGDLGWFP 353 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTK 296 F N +K + N + P+ + G + R +A + K Sbjct: 354 SDAFGADFGNHVKALADGNVSEPFRSAAGWHIVQRLGTRQTDVTRENQRAQIRDTIGQRK 413 Query: 297 IEKHEAEYVKKLRSNAII 314 +E+ ++++LRS A + Sbjct: 414 LEESYERFLRELRSEAYV 431 >gi|302185941|ref|ZP_07262614.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. syringae 642] Length = 440 Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 98/313 (31%), Gaps = 19/313 (6%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ L Sbjct: 12 LMLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEAL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+E L+ Q E+SGI + +N A+ +S E F + L G+ N Sbjct: 72 QPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYN 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I V + + + E+ I Sbjct: 132 DAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDMGKAQLSEEFHLANILIATPDS 191 Query: 193 QNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + +Q + + +S + + G + + L P F Sbjct: 192 ASSEAIQAAAAKAKGIYDQLKKGADFTRLAATSSSSENALEGGDMGWRKAAQLPPPFGDM 251 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAE 303 L + T P T G + + +KR G + ++ + + + E Sbjct: 252 LSSMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRNEAETKR 311 Query: 304 YVKKLRSNAIIHY 316 +K+ I Sbjct: 312 LAQKIYDR--IEN 322 Score = 96.7 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 55/149 (36%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++N+ ++ + + + F+ + Sbjct: 282 QGQAQMRDEVHVRHILIKPSEIRNEAETKRLAQKIYDRIENGEDFAELAKSFSEDPGSAL 341 Query: 230 SIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAY 287 + G ++ + L P+F+ ++ + Q + P+ TQ G + + +R + A + Sbjct: 342 NGGDLNWVDPNSLVPEFRQVMSETPQGELSKPFQTQYGWHVLEVLGRRSTDATDQAREQQ 401 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ +++++R A + Sbjct: 402 ALNVLRNRKYDEELQTWLRQIRDEAYVEI 430 >gi|121956444|sp|Q4ZMG7|SURA_PSEU2 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor Length = 428 Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 95/309 (30%), Gaps = 19/309 (6%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GELEKIA 76 ++ + + + ++ +VI + +R+ ++ L+ Sbjct: 4 ALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQV 63 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + LI+E L+ Q E+SGI +N A+ +S E F + L G+ N ++ Sbjct: 64 LDRLILENLQLQMGERSGIRVSDEELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDARE 123 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + I V + + + E+ I + Sbjct: 124 QVRREMIISRVRQRRVAERIQVSQQEVKNFLASDMGKAQLSEEFHLANILIATPDSASSD 183 Query: 197 FVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252 +Q + + +S + + G + + L P F L Sbjct: 184 AIQAAAVKAKGIYDQLKKGADFTRLAATSSSSENALEGGDMGWRKAAQLPPPFGDMLSSM 243 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAEYVKK 307 + T P T G + + +KR G + ++ + + + E+ +K Sbjct: 244 PVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRNEEETKRLAQK 303 Query: 308 LRSNAIIHY 316 + I Sbjct: 304 IYDR--IEN 310 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 55/149 (36%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++N+ ++ + + + F+ + Sbjct: 270 QGQAQMRDEVHVRHILIKPSEIRNEEETKRLAQKIYDRIENGEDFAELAKSFSEDPGSAL 329 Query: 230 SIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAY 287 + G ++ + L P+F+ ++ + Q + P+ TQ G + + +R + A + Sbjct: 330 NGGDLNWVDPNSLVPEFRQVMSETPQGVLSKPFQTQYGWHVLEVLGRRSTDATDQAREQQ 389 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ +++++R A + Sbjct: 390 ALNVLRNRKYDEELQTWLRQIRDEAYVEI 418 >gi|294625755|ref|ZP_06704374.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664833|ref|ZP_06730154.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292599925|gb|EFF44043.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605389|gb|EFF48719.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 463 Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 35/320 (10%), Positives = 105/320 (32%), Gaps = 17/320 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK- 67 ++ ++ + I + P+ S + RI ++ +V+ ++ + + +K Q Sbjct: 1 MTKPFSVVLASLLAITSTVSPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYA 60 Query: 68 -------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + L++ ++ L++ L+ + +GI +N A+ G + + Sbjct: 61 GRENQLPPDDVLQRQVLERLVLVKLQVSRADGNGIRVSDEELNRAIASIAQQNGTTVDGL 120 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 L G+G F+ + + I + ++ + E E+ + + +L Sbjct: 121 RQKLAADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTALAQQAATGSQYHLA 180 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLLE 239 ++ + QK++ + + +++ + + G + Sbjct: 181 HILIGLPEGANAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSL 240 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQ 291 ++ F + P G + + + + RD K ++ + Sbjct: 241 DEIPNAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYHARHILVR 300 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 + E + +R+ Sbjct: 301 IGDNQTEAQAKAKIDTIRAR 320 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 18/157 (11%), Positives = 42/157 (26%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + Q + + +I + ++ Sbjct: 275 VEMRDANAGGEKKMVTEYHARHILVRIGDNQTEAQAKAKIDTIRARIVGGADFQATAKES 334 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + G + P F + + + + P+ TQ G + R Sbjct: 335 SEDTNSRGQGGDLGWFPADAFGPDFGKQVESLTDGAVSEPFRTQAGWHIVQRVGSRQTDV 394 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +A + K+E+ Y+++LR A + Y Sbjct: 395 SAENQRAQVRETIGRRKLEEEYNRYLQELRGEAYVSY 431 >gi|21241635|ref|NP_641217.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas axonopodis pv. citri str. 306] gi|81804731|sp|Q8PP23|SURA_XANAC RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|21106996|gb|AAM35753.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas axonopodis pv. citri str. 306] Length = 463 Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 35/320 (10%), Positives = 105/320 (32%), Gaps = 17/320 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK- 67 ++ ++ + I + P+ S + RI ++ +V+ ++ + + +K Q Sbjct: 1 MTKPFSVVLASLLAITSTVSPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYA 60 Query: 68 -------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + L++ ++ L++ L+ + +GI +N A+ G + + Sbjct: 61 GRENQLPPDDVLQRQVLERLVLVKLQVSRADGNGIRVSDEELNRAIASIAQQNGTTVDGL 120 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 L G+G F+ + + I + ++ + E E+ + + +L Sbjct: 121 RQKLAADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTALAQQAATGSQYHLA 180 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLLE 239 ++ + QK++ + + +++ + + G + Sbjct: 181 HILIGLPEGANAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSL 240 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQ 291 ++ F + P G + + + + RD K ++ + Sbjct: 241 DEIPNAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYHARHILVR 300 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 + E + +R+ Sbjct: 301 IGDNQTEAQAKAKIDTIRAR 320 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 18/157 (11%), Positives = 42/157 (26%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + Q + + +I + ++ Sbjct: 275 VEMRDANAGGEKKMVTEYHARHILVRIGDNQTEAQAKAKIDTIRARIVGGADFQATAKES 334 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + G + P F + + + + P+ TQ G + R Sbjct: 335 SEDTNSRGQGGDLGWFPADAFGPDFGKQVESLTDGAVSEPFRTQAGWHIVQRVGSRQTDV 394 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +A + K+E+ Y+++LR A + Y Sbjct: 395 SAENQRAQVRETIGRRKLEEEYNRYLQELRGEAYVSY 431 >gi|91776502|ref|YP_546258.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacillus flagellatus KT] gi|122070650|sp|Q1GZC0|SURA_METFK RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|91710489|gb|ABE50417.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacillus flagellatus KT] Length = 437 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 104/317 (32%), Gaps = 16/317 (5%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70 F + + + F A RI ++ VIT+ ++ RI + Q Sbjct: 5 VFKTIARHGLIALFFFFSISAMAAEVAKMDRIVAIVDQGVITEKELEDRIQTVIAQLEKQ 64 Query: 71 --------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 L+K ++ LI + L+ Q ++G+ D ++ + A LS +F Sbjct: 65 GTQLPPRDVLQKQILERLINDRLQLQYAAQTGLRVDDAQLDKTIERIAEQNKLSTGEFRK 124 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 L+ +GI F++ + + I + + + + E EI + + Sbjct: 125 ALEAEGIPYRKFREDIRNEIILARLREREVDNRVNVTESEIDNFLTTQSSRNDIQDEFEV 184 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK---FASKIHDVSIGKAQYLLE 239 I + +QK AE + L + + ++ + + G + Sbjct: 185 AHILIRAPEESTPEELQKLKAKAEAALKELQSGADFAQVSAGYSDAPNALEGGILGWKAS 244 Query: 240 SDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTP 294 S L F L + + G + + ++R L + ++ + + Sbjct: 245 SQLPSLFVDALQALQPGQLSPVLRSPNGYHILKLLNRRGGSSPLVVDQTHVRHILIKLSE 304 Query: 295 TKIEKHEAEYVKKLRSN 311 E + + ++ Sbjct: 305 VVSELEAEQKINSIKER 321 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 48/140 (34%), Gaps = 2/140 (1%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 I +++ ++ +++I +E +++ + G + Sbjct: 292 QTHVRHILIKLSEVVSELEAEQKINSIKERLDHGADFAELARQYSEDASANNGGDLGWTN 351 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTK 296 D P F+ + N + P T G I + ++R + + + + K Sbjct: 352 AGDTVPAFEKAMNALDINEISAPVRTPFGWHIIQVLERRKQDMTQESARLKARQEIRARK 411 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 + +++ +LR A + Y Sbjct: 412 ADDAFQDWLSELRDRAYVEY 431 >gi|319943017|ref|ZP_08017300.1| peptidyl-prolyl cis-trans isomerase [Lautropia mirabilis ATCC 51599] gi|319743559|gb|EFV95963.1| peptidyl-prolyl cis-trans isomerase [Lautropia mirabilis ATCC 51599] Length = 491 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 54/286 (18%), Positives = 110/286 (38%), Gaps = 11/286 (3%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQK---------INGELEKIAVQELIVET 84 RI +N VIT+ ++ +I L++ + EL K ++++I++ Sbjct: 79 PGIESLDRIVAVVNQGVITESELQAQIHLIEGRAAQTPGAGVPPPDELRKQVLEQMILQL 138 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 ++Q G+ V+ A+N GLS + + L +G+ + F++ L + + Sbjct: 139 AQEQYAADYGLKPSDAEVDRAVADVAQNNGLSTQQLTERLKDEGVSLDTFRRQLVAEIVS 198 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK-RIK 203 + + + E EI A K ++ EY IR +L +P+ Q + QK R Sbjct: 199 ARLRERETASNVSISEGEIDAELAKSGKVSQPEYDIRQILLKLPEGADQKEVARQKARAD 258 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYV 262 + + ++ + + G + DL F + ++K + P Sbjct: 259 ELVAKARKGADFGALAQENSEAGDAATGGSMGWRKADDLPGLFADTVRKLKPGEISAPVR 318 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + G + + D+RD G + P + AE ++L Sbjct: 319 SPAGFHILKLQDRRDGGATTVELTHARHILLPANSPETAAEAERRL 364 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 31/274 (11%), Positives = 80/274 (29%), Gaps = 6/274 (2%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQEL---IVETLKKQEIEKSGITFDSNTVNY 104 I++G+I +A + + +L + ++ ++ Sbjct: 209 NVSISEGEIDAELAKSGKVSQPEYDIRQILLKLPEGADQKEVARQKARADELVAKARKGA 268 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 F A+ + + + + A + ++ + Sbjct: 269 DFGALAQENSEAGDAATG-GSMGWRKADDLPGLFADTVRKLKPGEISAPVRSPAGFHILK 327 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 ++ T E + ++ ++ + ++F+S Sbjct: 328 LQDRRDGGATTVELTHARHILLPANSPETAAEAERRLSLFRRDIEAGKADFAKLAKEFSS 387 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR-DLGGEI 282 G +L D P+F+ +K + P TQ GV + + +R D Sbjct: 388 DGSAAKGGDLGWLYPGDTVPEFEQAMKSLHDGEISEPVQTQFGVHLVQVLGRRTDTESPE 447 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 L+ A+ K + +++++LR + Y Sbjct: 448 RLRNAARAKLREAKGGEAYQQWLRELRDRTYVEY 481 >gi|298485302|ref|ZP_07003394.1| Survival protein surA precursor (Peptidyl-prolyl cis-trans isomerase surA) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160152|gb|EFI01181.1| Survival protein surA precursor (Peptidyl-prolyl cis-trans isomerase surA) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 428 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 96/306 (31%), Gaps = 17/306 (5%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GELEKIA 76 ++ + + + ++ +VI + +R+ ++ L+ Sbjct: 4 ALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQV 63 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + LI+E L+ Q E+SGI + +N A+ +S E F + L G+ N ++ Sbjct: 64 LDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDARE 123 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + I V + + + E+ + I + Sbjct: 124 QVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEEFHLANILIATPDSASSD 183 Query: 197 FVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252 +Q + + +S + + G + + L P F L Sbjct: 184 AIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMGWRKAAQLPPPFGDMLSAM 243 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAEYVKK 307 + T P T G + + +KR G + ++ + + + E+ +K Sbjct: 244 PVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRNEEETKRLAEK 303 Query: 308 LRSNAI 313 + Sbjct: 304 IYDRIQ 309 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 53/149 (35%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++N+ ++ + + + F+ + Sbjct: 270 QGQAQMRDEVHVRHILIKPSEIRNEEETKRLAEKIYDRIQNGEDFAELAKSFSEDPGSAL 329 Query: 230 SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAY 287 + G ++ + L P+F+ + + Q + P+ T G + + +R + A + Sbjct: 330 NGGDLNWVDPNSLVPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQ 389 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ +++++R A + Sbjct: 390 ALNVLRNRKYDEELQTWLRQIRDEAYVEI 418 >gi|170723956|ref|YP_001751644.1| SurA domain-containing protein [Pseudomonas putida W619] gi|169761959|gb|ACA75275.1| SurA domain [Pseudomonas putida W619] Length = 441 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 109/309 (35%), Gaps = 16/309 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGEL 72 VL+ ++ + + R+ ++ +V+ + +R+ ++ L Sbjct: 14 VLLGAVLLSGAVHAAVQPLDRVVAIVDNDVVMQSQLDQRVQEVQQTIAKRGGGVPPTSAL 73 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 E+ ++ LIVE L+ Q E+SGI +N A+ G+S + F + L + G+ + Sbjct: 74 EQQVLERLIVENLQLQIGERSGIRITDEELNQAIGTIAQRNGMSLDQFRAALARDGLSFD 133 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR---TVLFSIPD 189 ++ + + I V + + E E+ R ++ + Sbjct: 134 DAREQVKREMIISRVRQRRVAERIQVSEQEVKNFLASDMGKMQMSEDYRLANILIPTPEG 193 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + +++ D + + ++ + + G+ + + L P+F + Sbjct: 194 ANSDDIQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGWRKAAQLPPEFAKL 253 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG----EIALKAYLSAQNTPTKIEKHEAEY 304 L + + T P G I + +KR + ++ + + + E + Sbjct: 254 LSSMATGDITQPLRIPSGFIIIKLEEKRGGSENVLRDEVHVRHILIKPSEIRSEAATEQL 313 Query: 305 VKKLRSNAI 313 ++L Sbjct: 314 AERLYERIK 322 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 19/165 (11%), Positives = 59/165 (35%), Gaps = 3/165 (1%) Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + + + I +++ + V + I ++++++ ++ + E Sbjct: 267 RIPSGFIIIKLEEKRGGSENVLRDEVHVRHILIKPSEIRSEAATEQLAERLYERIKGGED 326 Query: 215 DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAI 272 + F+ ++ G ++ + L P+F+ + Q T P+ TQ G + + Sbjct: 327 FAELAKSFSEDPGSALNGGDLNWVDPNSLVPEFREQMANAQQGVVTKPFKTQYGWHVLEV 386 Query: 273 CDKRDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R + K ++ +++++R A + Sbjct: 387 LGRRATDSTEQAREQQAMNVLRNRKYDEELQTWLRQIRDEAYVEI 431 >gi|213967673|ref|ZP_03395820.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. tomato T1] gi|213927449|gb|EEB60997.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. tomato T1] Length = 428 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 102/309 (33%), Gaps = 19/309 (6%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GELEKIA 76 ++ + + + ++ +VI + +R+ ++ +L+ Sbjct: 4 ALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMGQRVREVQQTIAKRGSGVPPAADLQPQV 63 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + LI+E L+ Q E+SGI + +N A+ +S E F + L G+ ++ Sbjct: 64 LDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYEDARE 123 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + I V + + E E+ + I + Sbjct: 124 QVRREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSEEFHLANILIATPDSASSD 183 Query: 197 FVQKRIKDAEESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252 +Q A+ +L K + + +S + + G + + L P F L Sbjct: 184 AIQAAAVKAKSIYDQLKKGADFAKIAATTSSSENALEGGDMGWRKAAQLPPPFGDMLSSM 243 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAEYVKK 307 + T P T G + + +KR G + ++ + + + E+ +K Sbjct: 244 PIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRSEEATKLLAQK 303 Query: 308 LRSNAIIHY 316 + I Sbjct: 304 IYER--IEN 310 Score = 92.4 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 15/149 (10%), Positives = 52/149 (34%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++++ + + E + F+ + Sbjct: 270 QGQAQMRDEVHVRHILIKPSEIRSEEATKLLAQKIYERIENGEDFATLAKSFSEDPGSAL 329 Query: 230 SIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-Y 287 + G ++ + L P+F++++ Q + P+ T G + + +R + Sbjct: 330 NGGDLNWVDPNSLVPEFRDVMSSTPQGELSKPFKTAYGWHVLEVLGRRATDATGQARDQQ 389 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K ++ +++++R A + Sbjct: 390 ALSVLRNRKYDEELQTWLRQIRDEAYVEI 418 >gi|71733994|ref|YP_272934.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554547|gb|AAZ33758.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. phaseolicola 1448A] Length = 440 Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 99/310 (31%), Gaps = 17/310 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ L Sbjct: 12 LMLGALLLSGAVHAAVQPLESVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEAL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+E L+ Q E+SGI N +N A+ +S E F + L G+ N Sbjct: 72 QPQVLDRLILENLQLQMGERSGIRVSDNELNQAIGTIAQRNNMSVEQFRAALAHDGLSYN 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I V + + + E+ + I Sbjct: 132 DAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEEFHLANILIATPDS 191 Query: 193 QNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + +Q + + +S + + G + + L P F Sbjct: 192 ASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMGWRKAAQLPPPFGDM 251 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAE 303 L + T P T G + + +KR G + ++ + + + E+ Sbjct: 252 LSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRNEEETKR 311 Query: 304 YVKKLRSNAI 313 +K+ Sbjct: 312 LAEKIYDRIQ 321 Score = 95.5 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 53/149 (35%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++N+ ++ + + + F+ + Sbjct: 282 QGQAQMRDEVHVRHILIKPSEIRNEEETKRLAEKIYDRIQNGEDFAELAKSFSEDPGSAL 341 Query: 230 SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAY 287 + G ++ + L P+F+ + + Q + P+ T G + + +R + A + Sbjct: 342 NGGDLNWVDPNSLVPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQ 401 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ +++++R A + Sbjct: 402 ALNVLRNRKYDEELQTWLRQIRDEAYVEI 430 >gi|255020576|ref|ZP_05292639.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) [Acidithiobacillus caldus ATCC 51756] gi|254969961|gb|EET27460.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) [Acidithiobacillus caldus ATCC 51756] Length = 479 Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats. Identities = 36/288 (12%), Positives = 107/288 (37%), Gaps = 13/288 (4%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---------LEKIAVQELIVET 84 + ++ +N ++IT +++R+A ++ + + L + +Q++I++ Sbjct: 68 SNAEDLDKVVAVVNDDIITSLQLAQRVAAIRARLQQQDPNALPPEEVLRRQVLQQMILQD 127 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 ++ Q +++GI D T++ AR L+ + L +QG F+ L + + Sbjct: 128 VELQIAKRAGIKVDQATLDQAIGNIARANNLTPDQLRQALAQQGQSWTQFEDDLRDRILV 187 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI-K 203 + + + + E+ +++K + + ++ + +PDN + +R + Sbjct: 188 DRLTQQEVESRIHIGPDEVKTFARQLKELGGVSFDLQQIFIPLPDNPTPDAISAARRQAQ 247 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYV 262 + + + +S + G+ ++ ++L P Q L+ + Sbjct: 248 EIRDRLEAGASFSRLAAEVSSSRDALQGGRLGWVKAAELPPAISQTLMSLKPGEISPVIP 307 Query: 263 TQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 G + D + + A + + + + + + Sbjct: 308 GPTGFHIFKVLDTKHEEPTVTEVKAAAIVLRASNGLQLQEAEARAQDI 355 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 13/124 (10%), Positives = 40/124 (32%), Gaps = 3/124 (2%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLKK-S 253 + R +D E + + +++ + G+ ++ L + + L Sbjct: 346 QEAEARAQDIETALQGGTRFSELARRYSQDPSTAAAGGELGWVAPGKLPDELERTLLALQ 405 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 ++P + + +R + + + A Q + E+ +++R A Sbjct: 406 PGAVSSPVRVGDAIYILQAQAQRQVPVGDEQILAAARMQLYNRIARQRLEEWQRRIRDGA 465 Query: 313 IIHY 316 + Sbjct: 466 YVEI 469 >gi|289627686|ref|ZP_06460640.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649005|ref|ZP_06480348.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. aesculi str. 2250] gi|330868493|gb|EGH03202.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 440 Score = 139 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 100/310 (32%), Gaps = 17/310 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ L Sbjct: 12 LMLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEAL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+E L+ Q E+SGI + +N A+ +S E F + L G+ N Sbjct: 72 QPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYN 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I V + + + E+ + I Sbjct: 132 DAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEEFHLANILIATPDS 191 Query: 193 QNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + +Q + + +S + + G + + L P F Sbjct: 192 ASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMGWRKAAQLPPPFGDM 251 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAE 303 L ++ T P T G + + +KR G + ++ + + + E+ Sbjct: 252 LSAMPVDDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRNEEETKR 311 Query: 304 YVKKLRSNAI 313 +K+ Sbjct: 312 LAEKIYDRIQ 321 Score = 95.5 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 53/149 (35%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++N+ ++ + + + F+ + Sbjct: 282 QGQAQMRDEVHVRHILIKPSEIRNEEETKRLAEKIYDRIQNGEDFAELAKSFSEDPGSAL 341 Query: 230 SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAY 287 + G ++ + L P+F+ + + Q + P+ T G + + +R + A + Sbjct: 342 NGGDLNWVDPNSLVPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQ 401 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ +++++R A + Sbjct: 402 ALNVLRNRKYDEELQTWLRQIRDEAYVEI 430 >gi|330955092|gb|EGH55352.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae Cit 7] Length = 440 Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 98/310 (31%), Gaps = 17/310 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ L Sbjct: 12 LMLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEAL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+E L+ Q E+SGI + +N A+ +S + F + L G+ N Sbjct: 72 QPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVDQFRAALAHDGLSYN 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR---TVLFSIPD 189 ++ + + I V + + + E+ ++ + Sbjct: 132 DAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDLGKAQLSEEFHLANILIATPDS 191 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + K + + +S + + G + + L P F Sbjct: 192 ASSDAIQAAAAKAKAIYDQLKKGADFTRLAATSSSSENALEGGDMGWRKAAQLPPPFGDM 251 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAE 303 L + T P T G + + +KR G + ++ + + + E Sbjct: 252 LSSMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRNEAETKR 311 Query: 304 YVKKLRSNAI 313 +K+ Sbjct: 312 LAQKIYDRIQ 321 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 55/149 (36%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++N+ ++ + + + F+ + Sbjct: 282 QGQAQMRDEVHVRHILIKPSEIRNEAETKRLAQKIYDRIQNGEDFAELAKSFSEDPGSAL 341 Query: 230 SIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAY 287 + G ++ + L P+F+ ++ + Q + P+ TQ G + + +R + A + Sbjct: 342 NGGDLNWVDPNSLVPEFRQVMSETPQGELSKPFQTQYGWHVLEVLGRRSTDATDQAREQQ 401 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ +++++R A + Sbjct: 402 ALNVLRNRKYDEELQTWLRQIRDEAYVEI 430 >gi|71899114|ref|ZP_00681278.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Ann-1] gi|71731108|gb|EAO33175.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Ann-1] Length = 463 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 41/324 (12%), Positives = 111/324 (34%), Gaps = 23/324 (7%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISKRIALLKLQ 66 ++ + ++ + + + +P+ S + RI ++ V+ ++ + I +K Q Sbjct: 1 MTRYFSIVLSLLLAVSCVFLPVASARQQQHQPLDRIVAVVDDNVVLKSELDRAIHNVKSQ 60 Query: 67 K--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 + L++ ++ LI+ L+ + +GI + +N A N S + Sbjct: 61 YVGHEGQLPPDEVLQRQVLERLILIKLQVARAQTNGIRVSDDELNQAISSIAENNKTSVD 120 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 L +GI F+Q + + + + + E E+ + + +Y Sbjct: 121 GLRQKLVAEGISFPEFRQSVRDEITVHHLRQGFAQSRIVVSEGEVDTAL--AQANSGAQY 178 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK--FASKIHDVSIGKAQY 236 ++ +L S+PD Q + ++ + +S + + ++ + + G + Sbjct: 179 HLQHILVSLPDGATSEQIAIAQKKINGIKSVIDKGELAFSAAAVRYSDSPNALESGDLGW 238 Query: 237 LLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG--------GEIALKAY 287 ++ F + P G + + + + D + Sbjct: 239 RSLDEIPEAFAQMVQTMKPGQIVGPLRGTSGFQLLKLVEVHDSTAAAGPRQMATEYHARH 298 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSN 311 + + T + E + LR+ Sbjct: 299 ILVRITEKQKEAQAKAKIDTLRAR 322 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 43/138 (31%), Gaps = 3/138 (2%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLL 238 + + Q + + +I + + ++ + G + Sbjct: 294 YHARHILVRITEKQKEAQAKAKIDTLRARIAGGADFQTVARESSEDANNSNQGGDLGWFP 353 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTK 296 F N +K + N + P+ + G + R +A + K Sbjct: 354 SDAFGADFGNHVKALADGNVSEPFRSAAGWHIVQRLGTRQTDVTRENQRAQIRDTIGQRK 413 Query: 297 IEKHEAEYVKKLRSNAII 314 +E+ ++++LRS A + Sbjct: 414 LEESYERFLRELRSEAYV 431 >gi|77461354|ref|YP_350861.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens Pf0-1] gi|121956432|sp|Q3K5T4|SURA_PSEPF RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|77385357|gb|ABA76870.1| putative chaperone [Pseudomonas fluorescens Pf0-1] Length = 426 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 104/306 (33%), Gaps = 17/306 (5%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--------QKINGELEKIA 76 + + + R+ ++ +V+ + +R+ ++ G L++ Sbjct: 4 ALFLGTAANAAVQSIDRVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGLPPPGVLDQQV 63 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 ++ LIVE L+ Q E+SGI +N A+ ++ E F L + G+ ++ Sbjct: 64 LERLIVENLQLQIGERSGIRITDEELNQAVGTIAQRNNMTPEQFRIALSRDGLSYEDARE 123 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + + V + + E E+ + IP + N Sbjct: 124 QIRREMVISRVRQRRVAERIQVSEQEVKNFLASDLGKMQLSEELHLANILIPTPESANSE 183 Query: 197 FV---QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252 + ++ + + + ++ + + G + + L P F + L Sbjct: 184 AIQSAARKAMEVYQQLKQGADFGQMAVANSASDNALEGGDMGWRKAAQLPPPFDRELSSM 243 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + T P T G + + +KR + ++ + +P + E E + L Sbjct: 244 ATGDITQPARTPGGFIILKLLEKRGGESQMRDEVHVRHILVKPSPVRDEAKTKELAQSLY 303 Query: 310 SNAIIH 315 + I Sbjct: 304 NR--IE 307 Score = 92.0 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 15/147 (10%), Positives = 52/147 (35%), Gaps = 3/147 (2%) Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSI 231 + + + + ++++ ++ + +K++ ++ Sbjct: 270 ESQMRDEVHVRHILVKPSPVRDEAKTKELAQSLYNRIEAGEDFAELAKKYSEDPGSALNG 329 Query: 232 GKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLS 289 G ++ + L P+F+ ++ K Q + P+ TQ G + + +R + Sbjct: 330 GDLNWIDPNALVPEFRAVMAKSPQGQLSKPFQTQYGWHVLEVLGRRATDSTEQAREQQAM 389 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ +++++R A + Sbjct: 390 TVLRNRKYDEELQTWLRQIRDEAYVEI 416 >gi|15837440|ref|NP_298128.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa 9a5c] gi|81788857|sp|Q9PF40|SURA_XYLFA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|9105742|gb|AAF83648.1|AE003923_6 peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa 9a5c] Length = 464 Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 112/325 (34%), Gaps = 24/325 (7%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISKRIALLKLQ 66 ++ + ++ + + + +P+ S + RI ++ V+ ++ + I +K Q Sbjct: 1 MTRYFSIVLSLLLAVSCVFLPVASARQQQHQPLDRIVAVVDDNVVLKSELDRAIHNVKSQ 60 Query: 67 K--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 + L++ ++ LI+ L+ + +GI + +N A N S + Sbjct: 61 YVGHEGQLPPDEVLQRQVLERLILIKLQVARAQTNGIRVSDDELNQAISSIAENNKTSVD 120 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 L +GI F+Q + + + + + E E+ + + +Y Sbjct: 121 GLRQKLVAEGISFPEFRQSVRDEITVHHLRQGFAQSRIVVSEGEVDTAL--AQASSGAQY 178 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK--FASKIHDVSIGKAQY 236 ++ +L ++PD Q + ++ D +S + + ++ + + G + Sbjct: 179 HLQHILVAVPDGATSQQIAIAQKKIDGIKSVIDKGELAFSAAAVRYSDSPNALESGDLGW 238 Query: 237 LLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRD---------LGGEIALKA 286 ++ F + P G + + + + RD Sbjct: 239 RSLDEIPEAFAQMVQTMKPGQIVGPLRGTSGFQLLKLVEVRDSAAAAAGPRQMATEYHAR 298 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ + T + E + LR+ Sbjct: 299 HILVRITEKQKEAEAKAKIDTLRAR 323 Score = 84.7 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 18/156 (11%), Positives = 46/156 (29%), Gaps = 3/156 (1%) Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 E+ + + + Q + + +I + Sbjct: 277 EVRDSAAAAAGPRQMATEYHARHILVRITEKQKEAEAKAKIDTLRARIAGGADFQTVARE 336 Query: 222 FASKIHDVS-IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG 279 + ++ + G + F N +K + N + P+ + G + R Sbjct: 337 SSEDANNSNQGGDLGWFPSDAFGADFGNHVKALADGNVSEPFRSAAGWHIVQRLGTRQTD 396 Query: 280 GE-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +A + K+E+ ++++LRS A + Sbjct: 397 VTRENQRAQIRDTIGQRKLEESYERFLRELRSEAYV 432 >gi|298370562|ref|ZP_06981877.1| SurA/PPIASE domain protein [Neisseria sp. oral taxon 014 str. F0314] gi|298281172|gb|EFI22662.1| SurA/PPIASE domain protein [Neisseria sp. oral taxon 014 str. F0314] Length = 304 Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 35/315 (11%), Positives = 100/315 (31%), Gaps = 29/315 (9%) Query: 15 LLTTYFVLIIFCIVPIVSYKS-WAMSSRIRTTINGEVITDGDISKRIALLKL------QK 67 + +L + + + + S I ++ +VIT ++++ +A + Q Sbjct: 1 MNFKPLILAAALGLTLNVHAADVKFSDGIAAVVDNDVITQREVAQAVAAARSRLPKGSQI 60 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 N EL + + +L+ ++L Q ++ I ++ Q+ + + Sbjct: 61 SNDELRQQVLSQLVNQSLIIQAGKRKKIQASEAEIDAVLAQNPTQAKKANKAVR------ 114 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT------VREYLIR 181 + +A + V + M + E+ + + + Sbjct: 115 --------RQIADSIVVEKVRQQAIMQNSRVSDAEVDRFLAQAQRQGITLPAGEPLRQYK 166 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + + + I+ +++ + G + + Sbjct: 167 AQHILLKADSDNAVSAAESSIRKIYAQARSGTDFSALARQYSQDTSAGNGGDLGWFSDGQ 226 Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEK 299 + F++ + K + P TQ G I + + RD E + + + K ++ Sbjct: 227 MVAPFEDAVHKLKPGQVSPPVRTQFGWHIIKLNEVRDAGTPEERQRNAVRQYISNQKAQQ 286 Query: 300 HEAEYVKKLRSNAII 314 +++L S++ + Sbjct: 287 ATTNLLQELHSSSYV 301 >gi|325576844|ref|ZP_08147459.1| peptidyl-prolyl cis-trans isomerase [Haemophilus parainfluenzae ATCC 33392] gi|325161050|gb|EGC73168.1| peptidyl-prolyl cis-trans isomerase [Haemophilus parainfluenzae ATCC 33392] Length = 310 Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 121/315 (38%), Gaps = 19/315 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + + ++F ++ + ++ R+ T+NG I ++ + ++ Sbjct: 1 MKKSMLKSLLFAMIGLFTFSQAQAEERVVATVNGTPILQSQVNAVM-------GKKGSQR 53 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A+ ++I + L ++ I++SG+ + VN A GL+ F LD QGI N F Sbjct: 54 AALDKIIDDMLTEKAIKESGVKVNQAEVNRIVEDIAAKNGLTYGQFLDALDYQGISLNAF 113 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI----------TVREYLIRTVL 184 KQ ++ Q + V + ++ A ++M + +EY +R +L Sbjct: 114 KQQISRQMLMAGVRNHAIQNSVDVTREQVEALGKQMLDEAKAKGTAQKVMGKEYEVRHIL 173 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY-LLESDLH 243 + Q + +E ++ L+ + + G Y E+ + Sbjct: 174 LKLNPLLDDAQAKAELERIRSEIILGKMTFADAALKYSKDYLSGANGGSLGYAFPEAYVG 233 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEA 302 P + + Q + P+ ++ G + + RD Q +++++ Sbjct: 234 PFAKMVETTPQGTVSAPFKSEFGWHILEVTGSRDGDKTEDAYRQKAYEQIVNSQLQEATK 293 Query: 303 EYVKKLRSNAIIHYY 317 ++VK LR NA I Y+ Sbjct: 294 DWVKALRKNADIQYF 308 >gi|254522723|ref|ZP_05134778.1| chaperone SurA [Stenotrophomonas sp. SKA14] gi|219720314|gb|EED38839.1| chaperone SurA [Stenotrophomonas sp. SKA14] Length = 447 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 38/321 (11%), Positives = 101/321 (31%), Gaps = 22/321 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVS-----YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK 67 + + + + + + + RI ++ +VI ++ + IA +K Q Sbjct: 1 MTKRFPVLLASLLAVSSVSAPLQVLAQEAQPLDRIAAVVDEDVILQSELQRAIANIKAQY 60 Query: 68 --------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 L + ++ L++ L+ + SGI +N A+ G + + Sbjct: 61 AGRENQLPPEDVLSRQVLERLVLVKLQVARAQSSGIRVGDQELNQAMNAIAQQNGSTLDA 120 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 L GI N F+ + + + ++ + E E+ A ++ + + +L Sbjct: 121 LRQRLAHDGIDFNDFRASVRDEITVQRLRQSFAQSRISVSEGEVDAALKQQATVGNQYHL 180 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLL 238 ++ QK+ + + +++ + + G + Sbjct: 181 AHILVALPDGANADQIATGQKKADGVKALLDKGELDFNAAAVRYSDSPNALEGGDLGWRS 240 Query: 239 ESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDL-------GGEIALKAYLSA 290 ++ F ++ K P G + + + D RD ++ Sbjct: 241 LDEIPQAFAQMMEKMKPGEVVGPIRGPSGFQLLKLVDVRDASATAGANTVTEYHGRHILV 300 Query: 291 QNTPTKIEKHEAEYVKKLRSN 311 + + + + LR+ Sbjct: 301 RVDDHQTDAAAKAKIDTLRAR 321 Score = 84.7 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 44/156 (28%), Gaps = 5/156 (3%) Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 ++ TV EY R +L + Q + +I ++ Sbjct: 277 DVRDASATAGANTVTEYHGRHILV--RVDDHQTDAAAKAKIDTLRARIAGGADFETVAKE 334 Query: 222 FASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + G + P F Q + + P+ T G + R Sbjct: 335 SSEDNNSKGQGGDLGWFPADAFGPAFGQQVSGLQDGGVSQPFRTDAGWHIVQRVATRQTD 394 Query: 280 GEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +A + K+E ++++LR A + Sbjct: 395 VTNDNQRAQVRETIGRRKLEDEYNRFLQELRGEAYV 430 >gi|122070657|sp|Q48NT5|SURA_PSE14 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor Length = 428 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 96/306 (31%), Gaps = 17/306 (5%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GELEKIA 76 ++ + + + ++ +VI + +R+ ++ L+ Sbjct: 4 ALLLSGAVHAAVQPLESVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQV 63 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + LI+E L+ Q E+SGI N +N A+ +S E F + L G+ N ++ Sbjct: 64 LDRLILENLQLQMGERSGIRVSDNELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDARE 123 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + I V + + + E+ + I + Sbjct: 124 QVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEEFHLANILIATPDSASSD 183 Query: 197 FVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252 +Q + + +S + + G + + L P F L Sbjct: 184 AIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMGWRKAAQLPPPFGDMLSAM 243 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAEYVKK 307 + T P T G + + +KR G + ++ + + + E+ +K Sbjct: 244 PVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRNEEETKRLAEK 303 Query: 308 LRSNAI 313 + Sbjct: 304 IYDRIQ 309 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 53/149 (35%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++N+ ++ + + + F+ + Sbjct: 270 QGQAQMRDEVHVRHILIKPSEIRNEEETKRLAEKIYDRIQNGEDFAELAKSFSEDPGSAL 329 Query: 230 SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAY 287 + G ++ + L P+F+ + + Q + P+ T G + + +R + A + Sbjct: 330 NGGDLNWVDPNSLVPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQ 389 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ +++++R A + Sbjct: 390 ALNVLRNRKYDEELQTWLRQIRDEAYVEI 418 >gi|152984838|ref|YP_001346133.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa PA7] gi|150959996|gb|ABR82021.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa PA7] Length = 430 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 109/308 (35%), Gaps = 15/308 (4%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--------QKINGEL 72 + + ++ ++ R+ ++ +VI + +R+ + L Sbjct: 12 LALGAALLCSFAHAEVVPLDRVVAIVDNDVIMQSQLDQRLREVHQTLLKRGAPLPPEHVL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + ++ LI+E +++Q ++SGI +N A+ G+S E F + L + G+ Sbjct: 72 TQQVLERLIIENIQQQIGDRSGIRISDEELNQAMATIAQRNGMSLEQFQAALTRDGLSYA 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + + + V + + E E+ R IP + Sbjct: 132 DARDQVRREMVISRVRQRRVAERIQVSEQEVKNFLASDMGKIQLSEEYRLANILIPVPEA 191 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + +Q + A+E +L + + ++ + + G+ + + L F ++ Sbjct: 192 ASSDVIQAAARQAQELYQQLKQGADFGQLAISRSAGDNALEGGEIGWRKAAQLPQPFDSM 251 Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYV 305 + + + T P T G + + +KR + ++ + + + + + Sbjct: 252 IGSLAVGDVTEPVRTPGGFIILKLEEKRGGSKMVRDEVHVRHILLKPSEIRSDAETEKLA 311 Query: 306 KKLRSNAI 313 +KL Sbjct: 312 QKLYERIQ 319 Score = 93.2 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 15/139 (10%), Positives = 48/139 (34%), Gaps = 3/139 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 + +++++ +K + E + F+ ++ G ++ Sbjct: 290 HVRHILLKPSEIRSDAETEKLAQKLYERIQSGEDFGELAKSFSEDPGSALNGGDLNWIDP 349 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKI 297 L P+F+ + Q + P+ +Q G + + +R + + K Sbjct: 350 EALVPEFRQVMNDTPQGELSKPFRSQFGWHILQVLGRRATDSSEKFREQQAVSVLRNRKY 409 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ +++++R A + Sbjct: 410 DEELQAWLRQIRDEAYVEI 428 >gi|301061946|ref|ZP_07202675.1| SurA N-terminal domain protein [delta proteobacterium NaphS2] gi|300443963|gb|EFK07999.1| SurA N-terminal domain protein [delta proteobacterium NaphS2] Length = 316 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 104/311 (33%), Gaps = 17/311 (5%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----------EL 72 I+ + +S +NG+VIT ++ + + K Q + L Sbjct: 2 FSLAILSWPASAEEKPASEKVAVVNGDVITRANLDRAMDFAKRQSMQQGKPLDEEQLAAL 61 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 +K + +LI L Q +K+G D V+ F Q + + E +++ + + Sbjct: 62 KKETLDKLIGIELLYQASKKAGNKVDEKQVDEKFAQFKKRF-PNEEALQKTMEEWHVTEA 120 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K L + V +F+ K E E+ A + ++ I Sbjct: 121 DMKAELKKGMVTEAFVMKNFVDKTTIPEEEVKAYYDSHPQFFKQPEQVKASHILIKVKPD 180 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + +K E+++ + + + G Y + F+++ Sbjct: 181 ATEAEKAEAMKKIEKAQDKLLEGEDFAEVAKTTSEGPSASKGGDLGYFGRGQMVKPFEDV 240 Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVK 306 ++ TQ G I + DK+ +K + +++K +Y+ Sbjct: 241 AFSLEPGKVSDVVKTQFGYHLIKVVDKKPETTIPLETVKPRIEQFLKQQEVQKEIKKYID 300 Query: 307 KLRSNAIIHYY 317 LR A + + Sbjct: 301 NLRKGAKVEIF 311 >gi|39995126|ref|NP_951077.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Geobacter sulfurreducens PCA] gi|39981888|gb|AAR33350.1| PPIC-type PPIASE domain protein [Geobacter sulfurreducens PCA] gi|298504156|gb|ADI82879.1| peptidylprolyl cis-trans isomerase, PpiC-type, SurA family [Geobacter sulfurreducens KN400] Length = 321 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 105/318 (33%), Gaps = 17/318 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING---- 70 ++ L + ++ + S S + SRI +N E++T + K L + Sbjct: 1 MIKRLIPLSLAVVLTLPSLSSAEVVSRILAVVNDEIVTSYAVDKEKRALLKEAERQQPPP 60 Query: 71 ------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L+++A+ LI + L +Q+I + I V R LS E + L Sbjct: 61 DPKSLANLDEVALNRLIDKKLVEQKIRELDIRVGEEEVRQAIEDVKRQNKLSQEALVAAL 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 QG+ + +K + Q +V + K E E+ + K E + R Sbjct: 121 ANQGLSFDQYKAQIKEQLERLRLVSQEVRSKIQVGEREMREYYEANKAKFGAEDIFRARN 180 Query: 185 FSIPDNKLQNQGFVQKRI---KDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLES 240 + + V+K + +++ + G + Sbjct: 181 IYFKLDDKMSAEQVKKVMTTAMTVLHEAQSGKDFAELARQYSDDPAAKGNGGDLGTFRKG 240 Query: 241 D-LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKI 297 D L + L + ++ T G+ + + ++ +KA + K Sbjct: 241 DILPEFEEQLTRMQPGEVSDLIYTATGLHIVKLEERSLGTPKPFEQVKAEVEDLVYRKKS 300 Query: 298 EKHEAEYVKKLRSNAIIH 315 E ++V LR A I Sbjct: 301 EDRFNQWVADLRKGAAIE 318 >gi|15595791|ref|NP_249285.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa PAO1] gi|9946466|gb|AAG03983.1|AE004495_7 peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa PAO1] Length = 430 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 110/308 (35%), Gaps = 15/308 (4%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--------QKINGEL 72 + + ++ ++ R+ ++ +VI + +R+ + L Sbjct: 12 LALGAALLCSFAHAEVVPLDRVVAIVDNDVIMQSQLDQRLREVHQTLLKRGAPLPPEHVL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + ++ LI+E +++Q ++SGI +N A+ G+S E F + L + G+ Sbjct: 72 TQQVLERLIIENIQQQIGDRSGIRISDEELNQAMGTIAQRNGMSLEQFQTALTRDGLSYA 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + V + + E E+ R IP + Sbjct: 132 DAREQVRREMVISRVRQRRVAERIQVSEQEVKNFLASDMGKIQLSEEYRLANILIPVPEA 191 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + +Q + A+E +L + + ++ + + G+ + + L F ++ Sbjct: 192 ASSDVIQAAARQAQELYQQLKQGADFGQLAISRSAGDNALEGGEIGWRKAAQLPQPFDSM 251 Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYV 305 + + + T P T G + + +KR + ++ + + + E + Sbjct: 252 IGSLAVGDVTEPVRTPGGFIILKLEEKRGGSKMVRDEVHVRHILLKPSEIRSEAETEKLA 311 Query: 306 KKLRSNAI 313 +KL Sbjct: 312 QKLYERIQ 319 Score = 92.8 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 15/139 (10%), Positives = 49/139 (35%), Gaps = 3/139 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 + ++++++ +K + E + F+ ++ G ++ Sbjct: 290 HVRHILLKPSEIRSEAETEKLAQKLYERIQSGEDFGELAKSFSEDPGSALNGGDLNWIDP 349 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKI 297 L P+F+ + Q + P+ +Q G + + +R + + K Sbjct: 350 EALVPEFRQVMNDTPQGELSKPFRSQFGWHILQVLGRRATDSSEKFREQQAVSVLRNRKY 409 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ +++++R A + Sbjct: 410 DEELQAWLRQIRDEAYVEI 428 >gi|75675872|ref|YP_318293.1| hypothetical protein Nwi_1680 [Nitrobacter winogradskyi Nb-255] gi|74420742|gb|ABA04941.1| conserved unknown protein [Nitrobacter winogradskyi Nb-255] Length = 314 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 125/299 (41%), Gaps = 4/299 (1%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 +L +F + VS S + I +NGE IT DI +R L+K+ + + EL Sbjct: 12 LLAVFAFLTFVSMNSPLHAQSIAVMVNGEPITTLDIEQRSRLIKISTHKSPSRQEVIDEL 71 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I E +K +E +K G+ S ++ + G+S E + L QGI + K L Sbjct: 72 IDEKVKVKEAKKYGVNPTSTDIDRAYANMGARMGMSPEQLTKSLGSQGIRPDTIKSRLKA 131 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIRTVLFSIPDNKLQNQGFV 198 +W +V+ F + ++ + + + + + V Sbjct: 132 DLVWGSLVRGRFKESLLVSDRDVNEALKNSGEDQSKIEGVEYQMRPVVLIVPRGATASMV 191 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNT 257 + R +A R R+ + + + ++ + +DL P ++ L K + + Sbjct: 192 EARRNEANALRERVQSCAEIIRTV-KVMRNATLRETITKTSTDLPPPLRDLLDKTAVGHL 250 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 T P +T++GVE +A+C K+ + K + + K EK Y++++R +A+I Y Sbjct: 251 TPPEMTRQGVEMVAVCGKKVTSVDTPKKKEIREKMFADKYEKRSKSYLERIRKSAMIEY 309 >gi|254243688|ref|ZP_04937010.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa 2192] gi|126197066|gb|EAZ61129.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa 2192] Length = 430 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 111/308 (36%), Gaps = 15/308 (4%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--------QKINGEL 72 + + ++ ++ R+ ++ +VI + +R+ + L Sbjct: 12 LALGAALLCSFAHAEVVPLDRVVAIVDNDVIMQSQLDQRLREVHQTLLKRGAPLPPEHVL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + ++ LI+E +++Q ++SGI +N A+ G+S E F + L + G+ + Sbjct: 72 TQQVLERLIIENIQQQIGDRSGIRISDEELNQAMGTIAQRNGMSLEQFQAALTRDGLSYS 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + V + + E E+ R IP + Sbjct: 132 DAREQVRREMVISRVRQRRVAERIQVSEQEVKNFLASDMGKIQLSEEYRLANILIPVPEA 191 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + +Q + A+E +L + + ++ + + G+ + + L F ++ Sbjct: 192 ASSDVIQAAARQAQELYQQLKQGADFGQLAISRSAGDNALEGGEIGWRKAAQLPQPFDSM 251 Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYV 305 + + + T P T G + + +KR + ++ + + + E + Sbjct: 252 IGSLAVGDVTEPVRTPGGFIILKLEEKRGGSKMVRDEVHVRHILLKPSEIRSEAETEKLA 311 Query: 306 KKLRSNAI 313 +KL Sbjct: 312 QKLYERIQ 319 Score = 92.4 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 15/139 (10%), Positives = 49/139 (35%), Gaps = 3/139 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 + ++++++ +K + E + F+ ++ G ++ Sbjct: 290 HVRHILLKPSEIRSEAETEKLAQKLYERIQSGEDFGELAKSFSEDPGSALNGGDLNWIDP 349 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKI 297 L P+F+ + Q + P+ +Q G + + +R + + K Sbjct: 350 EALVPEFRQVMNDTPQGELSKPFRSQFGWHILQVLGRRATDSSEKFREQQAVSVLRNRKY 409 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ +++++R A + Sbjct: 410 DEELQAWLRQIRDEAYVEI 428 >gi|301155190|emb|CBW14654.1| unnamed protein product [Haemophilus parainfluenzae T3T1] Length = 310 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 121/315 (38%), Gaps = 19/315 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + + ++F ++ + ++ R+ T+NG I ++ + ++ Sbjct: 1 MKKSMLKSLLFAMIGLFTFSQVQAEERVVATVNGTPILQSQVNAVM-------GKKGSQR 53 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A+ ++I + L ++ I++SG+ + VN A GL+ F LD QGI N F Sbjct: 54 AALDKIIDDMLTEKAIKESGVKVNQAEVNRIVEDIAAKNGLTYGQFLDALDYQGISLNAF 113 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI----------TVREYLIRTVL 184 KQ ++ Q + V + ++ A ++M + +EY +R +L Sbjct: 114 KQQISRQMLMAGVRNHAIQNSVDVTREQVDALGKQMLDEAKAKGTAQKVMGKEYEVRHIL 173 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY-LLESDLH 243 + Q + +E ++ L+ + + G Y E+ + Sbjct: 174 LKLNPLLNDAQAKAELERIRSEIISGKMTFADAALKYSKDYLSGANGGSLGYAFPEAYVG 233 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEA 302 P + + Q + P+ ++ G + + RD Q +++++ Sbjct: 234 PFAKMVETTPQGTISAPFKSEFGWHILEVTGTRDGDKTEDAYRQKAYEQIVNSQLQEATK 293 Query: 303 EYVKKLRSNAIIHYY 317 ++VK LR NA I Y+ Sbjct: 294 DWVKALRKNADIQYF 308 >gi|116054322|ref|YP_788767.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa UCBPP-PA14] gi|218889335|ref|YP_002438199.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa LESB58] gi|254237192|ref|ZP_04930515.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa C3719] gi|296387100|ref|ZP_06876599.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa PAb1] gi|115589543|gb|ABJ15558.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas aeruginosa UCBPP-PA14] gi|126169123|gb|EAZ54634.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa C3719] gi|218769558|emb|CAW25318.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa LESB58] Length = 430 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 110/308 (35%), Gaps = 15/308 (4%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--------QKINGEL 72 + + ++ ++ R+ ++ +VI + +R+ + L Sbjct: 12 LALGAALLCSFAHAEVVPLDRVVAIVDNDVIMQSQLDQRLREVHQTLLKRGAPLPPEHVL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + ++ LI+E +++Q ++SGI +N A+ G+S E F + L + G+ Sbjct: 72 TQQVLERLIIENIQQQIGDRSGIRISDEELNQAMGTIAQRNGMSLEQFQAALTRDGLSYA 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + V + + E E+ R IP + Sbjct: 132 DAREQVRREMVISRVRQRRVAERIQVSEQEVKNFLASDMGKIQLSEEYRLANILIPVPEA 191 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + +Q + A+E +L + + ++ + + G+ + + L F ++ Sbjct: 192 ASSDVIQAAARQAQELYQQLKQGADFGQLAISRSAGDNALEGGEIGWRKAAQLPQPFDSM 251 Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYV 305 + + + T P T G + + +KR + ++ + + + E + Sbjct: 252 IGSLAVGDVTEPVRTPGGFIILKLEEKRGGSKMVRDEVHVRHILLKPSEIRSEAETEKLA 311 Query: 306 KKLRSNAI 313 +KL Sbjct: 312 QKLYERIQ 319 Score = 92.4 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 15/139 (10%), Positives = 49/139 (35%), Gaps = 3/139 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 + ++++++ +K + E + F+ ++ G ++ Sbjct: 290 HVRHILLKPSEIRSEAETEKLAQKLYERIQSGEDFGELAKSFSEDPGSALNGGDLNWIDP 349 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKI 297 L P+F+ + Q + P+ +Q G + + +R + + K Sbjct: 350 EALVPEFRQVMNDTPQGELSKPFRSQFGWHILQVLGRRATDSSEKFREQQAVSVLRNRKY 409 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ +++++R A + Sbjct: 410 DEELQAWLRQIRDEAYVEI 428 >gi|89094171|ref|ZP_01167114.1| peptidyl-prolyl cis-trans isomerase SurA [Oceanospirillum sp. MED92] gi|89081646|gb|EAR60875.1| peptidyl-prolyl cis-trans isomerase SurA [Oceanospirillum sp. MED92] Length = 430 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 115/314 (36%), Gaps = 16/314 (5%) Query: 14 KLLTTYFVLIIFCIVPIV-SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 KL + ++P+ S+ + RI +N +I ++ +R ++ + Q + Sbjct: 4 KLHKLISAAALSLLLPVSHSHAAEIPLDRIAAVVNEGIILQSELEQRTSITREQLQSRNT 63 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L K + LI+E+++KQ E++G+ + +N A GLS + F L Sbjct: 64 RIPPEHILRKQVLNRLIIESIQKQMAEQNGVRVSDSQLNGAIANIAAQNGLSIDQFREAL 123 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 +G N ++ + + + V +N + E E+ + Sbjct: 124 IAEGRDYNQAREQIRNEMLINSVQQNLVNRRIRVSEQELSNFLNSEDGKSQASAEFLLGH 183 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLLESD 241 I + +Q+ A+E +L + E +F++ + + G + ++ Sbjct: 184 ILIATPSQASPEIIQQAESKAKEIFDKLNNGADFAETAVEFSNAPNALKGGDLGWRKANE 243 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKI 297 L + + K S + P + G + DKR + L +++ + T + Sbjct: 244 LPEALSKAVRKLSPGEFSKPVRSPSGFHILLAKDKRGGAVQLIDQRLVSHILLKPTEIRT 303 Query: 298 EKHEAEYVKKLRSN 311 + + +L Sbjct: 304 NEQAKRQISQLYQR 317 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 50/138 (36%), Gaps = 3/138 (2%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 + +++ +++I + ++F+ G + Sbjct: 291 VSHILLKPTEIRTNEQAKRQISQLYQRIASGEDFAALAKEFSDDPASGSEGGSLGWTQNG 350 Query: 241 DLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIE 298 + P+F+ ++ + + P+ ++ G + + D R + GE + A K Sbjct: 351 QMVPEFEQVMNSTAVGQVSEPFESRFGWHILTVLDTRTEDMGETMQENRARATIRKRKFN 410 Query: 299 KHEAEYVKKLRSNAIIHY 316 + + +++++RS A + Sbjct: 411 EELSNWLREIRSQAYVDI 428 >gi|315186551|gb|EFU20310.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta thermophila DSM 6578] Length = 336 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 100/289 (34%), Gaps = 17/289 (5%) Query: 45 TINGEVITDGDISKRIALLKLQKIN----------GELEKIAVQELIVETLKKQEIEKSG 94 +NGE + ++ + + Q +L + + LI L QE ++ G Sbjct: 49 RVNGEEVPSKEVEREVQRYVAQYQQYGMEVSPEEEQKLREQVLDVLIGRLLLLQEAKRMG 108 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 ++ D V+ Q+ +G S E F + L + G + F++ L+ + VV Sbjct: 109 LSVDQAQVDAQIEQYKLQSG-SEETFKNILAQAGYTEEEFREELSRAFLLQQVVDEKVTK 167 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI---KDAEESRLR 211 + E A + + IR I ++ + + +E + Sbjct: 168 HLSVSDEEARAYYDENPEQFEQPEQIRARHILIRLAPDASKEEEEAAYAKIHEVQEKLNQ 227 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + ++ + G + + + P F+ N ++ T+ G+ I Sbjct: 228 GADFAELAKTYSEGPSAPNGGDLGFFGKGQMVPAFEEAAFALEVNQVSDVVRTEYGLHLI 287 Query: 271 AICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + D+++ G +K L K + V++L+ A I Y Sbjct: 288 QVTDRQEAGKASFEEVKDQLKEMLLQQKSSEAINALVEELKGKAEIEIY 336 >gi|148262225|ref|YP_001228931.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter uraniireducens Rf4] gi|146395725|gb|ABQ24358.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter uraniireducens Rf4] Length = 345 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 108/327 (33%), Gaps = 18/327 (5%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 ++ +S + V+I ++P+ + + S I +N ++IT ++ + AL+ Sbjct: 19 YSWISQTMSTFVKTIVIIAIALLPLTA--RAELVSGIAAIVNDDIITTYEVDRDAALIGK 76 Query: 66 QKIN---------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 + L K A+ LI + L +Q+I++ I V + L+ Sbjct: 77 EMEKRAPAEAADKAALRKTALSRLIDKKLIEQKIKELDIRVPEEEVRQSIEDVKKQNKLT 136 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 E + L QG+ + +K L Q ++ + K E E+ + Sbjct: 137 QEALVAALAAQGLSFDQYKAQLKEQLERLRLMSQEVRAKIQVGEREMREYYDANRAKYGE 196 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQ---KRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIG 232 E R +K + + + + +K++ G Sbjct: 197 EEFTRARQIYFKIDKKAAESEITRVTAAAANVLQEAKSGKDFAELAKKYSDDPAAAKDGG 256 Query: 233 KAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICD--KRDLGGEIALKAYLS 289 + D+ P+ + ++ T G+ I + + K +KA + Sbjct: 257 ELGTFKRGDMIPEIERALDTMKPGEISDLVRTPAGIHIIKLEERTKGKAKPFEEVKAEIE 316 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K E ++V LR A I Sbjct: 317 DFLYKKKSEDRFNQWVNDLRKGAAIEI 343 >gi|190572865|ref|YP_001970710.1| putative survival protein SurA [Stenotrophomonas maltophilia K279a] gi|190010787|emb|CAQ44396.1| putative survival protein SurA precursor [Stenotrophomonas maltophilia K279a] Length = 447 Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 37/321 (11%), Positives = 101/321 (31%), Gaps = 22/321 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVS-----YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK 67 + + + + + + + RI ++ +VI ++ + IA +K Q Sbjct: 1 MTKRFPVLLASLLAVSSVSAPLQVLAQEAQPLDRIAAVVDEDVILQSELQRAIANIKAQY 60 Query: 68 --------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 L + ++ L++ L+ + SGI +N A+ G + + Sbjct: 61 AGRENQLPPEDVLSRQVLERLVLVKLQVARAQGSGIRVSDQELNQAMNSIAQQNGSNLDA 120 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 L GI N F+ + + + ++ + E E+ A ++ + + +L Sbjct: 121 LRQRLAHDGIDFNDFRASVRDEITVQRLRQSFAQSRISVSEGEVDAALKQQATVGNQYHL 180 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLL 238 ++ QK+ + + +++ + + G + Sbjct: 181 AHILVALPDGANADQIATGQKKADGVKALLDKGELDFNAAAVRYSDSPNALEGGDLGWRS 240 Query: 239 ESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDL-------GGEIALKAYLSA 290 ++ F ++ K P G + + + + RD ++ Sbjct: 241 LDEIPQAFAQMMEKMKPGEVVGPIRGPSGFQLLKLVEVRDASATAGASTVTEYHGRHILV 300 Query: 291 QNTPTKIEKHEAEYVKKLRSN 311 + + + + LR+ Sbjct: 301 RVDDHQTDAAAKAKIDTLRAR 321 Score = 84.7 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 44/156 (28%), Gaps = 5/156 (3%) Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 E+ TV EY R +L + Q + +I ++ Sbjct: 277 EVRDASATAGASTVTEYHGRHILV--RVDDHQTDAAAKAKIDTLRARIAGGADFETVAKE 334 Query: 222 FASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + G + P F Q + + P+ T G + R Sbjct: 335 SSEDNNSKGQGGDLGWFPADAFGPAFGQQVAAIQDGGVSQPFRTDAGWHILQRVATRQTD 394 Query: 280 GEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +A + K+E ++++LR A + Sbjct: 395 VTNDNQRAQVRETIGRRKLEDEYNRFLQELRGEAYV 430 >gi|300114054|ref|YP_003760629.1| peptidylprolyl isomerase [Nitrosococcus watsonii C-113] gi|299539991|gb|ADJ28308.1| Peptidylprolyl isomerase [Nitrosococcus watsonii C-113] Length = 426 Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 106/312 (33%), Gaps = 17/312 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----- 70 + V I+ + S+ + + RI +N +++ + ++ + + ++ Q Sbjct: 1 MGKVLVAIVVLFWTMGSFATMS-LDRIVAVVNEDIVLESELEQMVRTVQDQLAAQGTSLP 59 Query: 71 ---ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 LE+ ++ L++E L+ Q ++GI T+N + A+N GL+ F + L++ Sbjct: 60 PGYVLERQVLERLVMEQLQLQLAARTGIQVGDETLNEALGRIAQNNGLTLSQFRNVLEQD 119 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 G +F++ + + I + K + + + EI K ++ I Sbjct: 120 GYDFPNFRENIRKELIISQLHKREVNDRVSVSKAEIDNFLATQKKHGNQDAQYHLAHILI 179 Query: 188 PDNKLQNQGFV---QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + V + + + + ++ + G + L Sbjct: 180 TVPEAASPEQVQGAKAKAEQVLQQLREGTDFQKVAVTYSDGQQALEGGDLGWRKVGQLPT 239 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEK 299 F + + + + G + + + R ++ + E+ Sbjct: 240 LFVDVVPQLQVGEISKLIRSPSGFHIVKLLEYRGEGGQQLVTQTQARHILLRADELASEQ 299 Query: 300 HEAEYVKKLRSN 311 + +LR Sbjct: 300 EVQLRLSQLRQR 311 Score = 99.0 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 35/284 (12%), Positives = 87/284 (30%), Gaps = 18/284 (6%) Query: 46 INGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 +N V ++ +I +A + A L + E + Sbjct: 144 VNDRVSVSKAEIDNFLA-----TQKKHGNQDAQYHLAHILITVPEAASPEQVQGAKAKAE 198 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 +Q R + ++ D Q + + + + V L+ G + I Sbjct: 199 QVLQQLREGTDFQKVAVTYSDGQQALEGGDLGWRKVGQLPTLFVDVVPQLQVGEISKLIR 258 Query: 165 ANKQKMKNITVREY---------LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + + + + ++L ++ VQ R+ + L Sbjct: 259 SPSGFHIVKLLEYRGEGGQQLVTQTQARHILLRADELASEQEVQLRLSQLRQRILSGDDF 318 Query: 216 CNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC 273 + + + G ++ + P+F+ ++ + P+ TQ G + + Sbjct: 319 SELAQAHSDDKASALKGGDLGWVSPGQMIPRFEEAMRSLEPGEISEPFKTQFGWHVVQVL 378 Query: 274 DKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 D+R + + K+E+ ++++LR A + Y Sbjct: 379 DRRQENVTEEFNRNRAKTEIHQRKVEEELENWLRQLRDEAYVEY 422 >gi|113461696|ref|YP_719765.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Haemophilus somnus 129PT] gi|112823739|gb|ABI25828.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Haemophilus somnus 129PT] Length = 314 Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 112/311 (36%), Gaps = 16/311 (5%) Query: 20 FVLIIFCIVPIVSYK-SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78 F ++F I+ ++S + + R+ T++G I + + +L + N E +IA+ Sbjct: 6 FKAVLFSIIGLLSITITAQAAERVVATVDGNPILESQVK---KVLGKRANNEENRQIALN 62 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 +I + L ++ I++ GI V+ A GL+ F LD QGI ++Q + Sbjct: 63 SIIDDLLVQKAIQELGIKVAPAHVDSVIENIAAQNGLTFGQFLDVLDYQGINYQAYRQQI 122 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE---------YLIRTVLFSIPD 189 A Q + +V EI K+ ++ + + Sbjct: 123 AYQILISEVRNQAIGSSVNVTREEIQDLGLKLFKQAKKQGKEKKVTAPEYNVRHILLKLN 182 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY-LLESDLHPQFQ 247 L + K + + + K++ G + E+ + + Sbjct: 183 PLLNDAQAKAKLTQIRADILANKITFADAALKYSKDYLSGADGGSLGFMFPEAYVPEFAK 242 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSAQNTPTKIEKHEAEYVK 306 + + + P+ T+ G + + D R+ Q ++++ +++K Sbjct: 243 VIRASKKGVISTPFKTEFGWHILEVTDIRNADITREAYMQEAYQQIVNQQLQEASGDWIK 302 Query: 307 KLRSNAIIHYY 317 LR A I Y+ Sbjct: 303 ALRKRAHIQYF 313 >gi|152978410|ref|YP_001344039.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Actinobacillus succinogenes 130Z] gi|150840133|gb|ABR74104.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Actinobacillus succinogenes 130Z] Length = 317 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 103/312 (33%), Gaps = 15/312 (4%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 L + I S ++ T+NGE I + + + + + ++A Sbjct: 6 LKAIALAAMGLFVISSGAQAVKVEQVVATVNGEPILESQLQRVM---GKRANTESNRRVA 62 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 V ++I + L ++ +++SG+ + VN A GL+ LD QGI + FK Sbjct: 63 VDKIIDDMLVQKAVKESGVKVNPAQVNQIVHNIADQNGLTYGQLLDALDYQGISLSQFKA 122 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR---------EYLIRTVLFSI 187 ++ Q + +V ++ +KM + Sbjct: 123 NISNQILMAEVRNRSIGKGVDVSREQVEELSRKMLQQAKAGGNPKAITATQYKARHILLK 182 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY-LLESDLHPQ 245 L + + + + + + ++ + G + E+ + Sbjct: 183 LTPLLNDAQAKAQLTQIRADIQSGKTTFAEAAKNYSKDYLSGANGGDLGFAFPENYVPEF 242 Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEY 304 + + Q + P+ T+ G + + D R ++ ++ ++ Sbjct: 243 AKMMTTAKQGVISAPFKTEFGWHILEVTDTRQGDITDVAYRQKAYETLVNEQLREYSKDW 302 Query: 305 VKKLRSNAIIHY 316 VK LR +A I Y Sbjct: 303 VKALRKHAEIKY 314 >gi|253995959|ref|YP_003048023.1| SurA domain-containing protein [Methylotenera mobilis JLW8] gi|253982638|gb|ACT47496.1| SurA domain protein [Methylotenera mobilis JLW8] Length = 434 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 50/319 (15%), Positives = 108/319 (33%), Gaps = 18/319 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 L +F K+ + F+ + F + ++ RI ++ VIT+ ++ RI L Q Sbjct: 2 LRNFSKI--SLFIALSFSQLNCLAAADVTKMDRIVAIVDQSVITEQELESRIVSLSAQLK 59 Query: 69 NG--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 L K ++ LI + L+ Q ++GI D ++ + A ++ +F Sbjct: 60 KQGTELPEASILRKQILERLISDALQLQYAAQTGIKVDDMQLDKTIERIAEQNKMTVREF 119 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 L++ GI F+ + + + + + + E EI + + Sbjct: 120 YDALNQDGISVRKFRSDIRNEITIARLREREVESRVNVSESEIDNYLTTQASTNQNQDEY 179 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE---KFASKIHDVSIGKAQYL 237 I + VQK +E L + + F+ + + G + Sbjct: 180 EISHILIRVPEDAATEDVQKAKTKVDEIFAALASGTSFAKVSASFSDAPNALEGGNIGWK 239 Query: 238 LESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQN 292 + + F L + + + G + + DKR L E ++ + Sbjct: 240 QGAQMPALFLDALKAMQKGEVSAALRSPNGFHILKLTDKRGGSSPLIIEQTHARHILIKL 299 Query: 293 TPTKIEKHEAEYVKKLRSN 311 + EK + ++ Sbjct: 300 SEVMSEKDAKTKMDGIKER 318 Score = 93.2 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 52/140 (37%), Gaps = 2/140 (1%) Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 I +++ ++ + ++ +E K +F+ + G ++ Sbjct: 288 EQTHARHILIKLSEVMSEKDAKTKMDGIKERLDNGEKFEVLARQFSEDGTASNGGDLGWV 347 Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPT 295 D PQF+ + N + P ++ G I + +++ + A + + Sbjct: 348 NPGDTVPQFEKAMNSLQPNEISAPVLSPFGWHVIQVLERKKQDMSKEAARLKARQEIRAR 407 Query: 296 KIEKHEAEYVKKLRSNAIIH 315 K ++ +++++LR A + Sbjct: 408 KADEAYQDWIRELRDRAFVE 427 >gi|88810558|ref|ZP_01125815.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrococcus mobilis Nb-231] gi|88792188|gb|EAR23298.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrococcus mobilis Nb-231] Length = 430 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 105/320 (32%), Gaps = 18/320 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYK---SWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 +K ++ + +V I + + + RI +N V+ ++ + + +++ Q Sbjct: 1 MKTRVRSLIIFLALVVFIEAQTPLLAAQVLDRIVAVVNDSVVLQSELKEELIIVRQQLQR 60 Query: 70 G--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 L+ +++LI++ L+ ++GI+ D T++ + A ++ F Sbjct: 61 QDMQLPDPRNLQHQVLEQLILKKLQLDAASRTGISVDDATLDAAVRRVAEQNQMTLSQFR 120 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 L + IG F+ L Q I + + EI + + EY + Sbjct: 121 DALAAEAIGWEDFRDKLRDQIIISRLRHQVMQSRINVTPQEIAQFVAQQRGGQSAEYHLG 180 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEE-SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 +L ++PD + + + ++ + G + + Sbjct: 181 HILVALPDAASPQTIAQARDKAERIHRQLEQEASFETLAASYSDSQTALQGGDLGWRKQG 240 Query: 241 DLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI-- 297 +L + + T + G + +R+ I + + T Sbjct: 241 ELPTLIAELISGLPVGKVTPVLRSPSGFHIFKLLARREGERHIITQTHARHILIETNAVV 300 Query: 298 -EKHEAEYVKKLRSNAIIHY 316 ++ ++ LR I Sbjct: 301 SDRDARRRLESLRKR--IEN 318 Score = 86.7 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 15/139 (10%), Positives = 47/139 (33%), Gaps = 3/139 (2%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYL 237 I N + + ++R++ + + + G ++ Sbjct: 286 QTHARHILIETNAVVSDRDARRRLESLRKRIENGDSFAALAKAHSDDSTSAFQGGDLGWV 345 Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPT 295 + F+ ++ + + P+ T+ G + + ++R A + + Q Sbjct: 346 DPGRMVATFEQVMDSLQPDEISQPFHTRYGWHIVQVLNRRKQDTTEAYRREQAAQQIQNR 405 Query: 296 KIEKHEAEYVKKLRSNAII 314 K++ ++++LR A + Sbjct: 406 KLQDETQLWLRQLREEAYV 424 >gi|170718609|ref|YP_001783810.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haemophilus somnus 2336] gi|168826738|gb|ACA32109.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haemophilus somnus 2336] Length = 321 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 115/318 (36%), Gaps = 17/318 (5%) Query: 14 KLLTTY-FVLIIFCIVPIVSYK-SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 K + + F ++F I+ ++S + + R+ T++G I + + +L + N E Sbjct: 6 KKMKVFNFKAVLFSIIGLLSITITAQAAERVVATVDGNPILESQVK---KVLGKRANNEE 62 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 +IA+ +I + L ++ I++ GI V+ A GL+ F LD QGI Sbjct: 63 NRQIALNSIIDDLLVQKAIQELGIKVAPAHVDSVIENIAAQNGLTFGQFLDVLDYQGINY 122 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE---------YLIRT 182 ++Q +A Q + +V EI K+ ++ Sbjct: 123 QAYRQQIAYQILISEVRNQAIGSSVNVTREEIQDLGLKLFKQAKKQGKEKKVTAPEYNVR 182 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY-LLES 240 + + L + K + + + K++ G + E+ Sbjct: 183 HILLKLNPLLNDAQAKAKLTQIRADILANKITFADAALKYSKDYLSGADGGSLGFMFPEA 242 Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSAQNTPTKIEK 299 + + + + + P+ T+ G + + D R+ Q ++++ Sbjct: 243 YVPEFAKVIRTSKKGVISTPFKTEFGWHILEVTDIRNADITREAYMQEAYQQIVNQQLQE 302 Query: 300 HEAEYVKKLRSNAIIHYY 317 +++K LR A I Y+ Sbjct: 303 ASGDWIKALRKRAHIQYF 320 >gi|260773615|ref|ZP_05882531.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio metschnikovii CIP 69.14] gi|260612754|gb|EEX37957.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio metschnikovii CIP 69.14] Length = 431 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 107/313 (34%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +KL T + + R+ +N VI DI + ++ + Sbjct: 1 MKLWTLALYTLTSLVSIATVQAQPVELDRVAVIVNSGVILQSDIDSALLTVRANAKTNQQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LIV+TL++QE ++ G+ D NT+N + A N + E + Sbjct: 61 TLPPENILREQIIEKLIVDTLQQQEADRIGVRIDDNTLNDAITEIAHNNQQTPEQLRLSI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 +QG+ F++ + + + + + E+ + + T + Sbjct: 121 AEQGLTYPEFREQIRKEIAASEARNALVRRRINIIPAEVDTLAELLAQETSATVQYKISH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + N Q++ V+ + + ++ + G ++ + ++ Sbjct: 181 IQLRFNDGQDKSEVEAQANKLVAELNQGADFSTMAITYSKGPRALQGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ + P+ + G + I D + + ++ + T ++ Sbjct: 241 IFADQIKMQNKGSIIGPFRSGVGFHILKIDDIKGLETVAVTEVNARHILIKPTIILSDEG 300 Query: 301 EAEYVKKLRSNAI 313 + L Sbjct: 301 AKNQLNDLVRRIN 313 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 49/140 (35%), Gaps = 3/140 (2%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238 + P L ++G + ++++ G+ Y Sbjct: 284 NARHILIKPTIILSDEGAKNQLNDLVRRINAGEASFAELAQQYSQDPGSAAQNGELGYQT 343 Query: 239 ESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTK 296 P+F++ ++ + P+ T G + + D+R++ + A+K K Sbjct: 344 PELYVPEFKHQIETLPVGTISEPFKTVHGWHIVEVLDRREVDRTDAAMKNRAYRILFNRK 403 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 + + ++++LR+ A + Sbjct: 404 FNEEASTWLQELRAGAFVEI 423 >gi|121997812|ref|YP_001002599.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halorhodospira halophila SL1] gi|121589217|gb|ABM61797.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halorhodospira halophila SL1] Length = 427 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 101/313 (32%), Gaps = 14/313 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-------- 66 + F+ + + + + RI + EV+ ++ + I ++ Q Sbjct: 1 MKIRAFLCAATLLAGLPTLAASETLDRIVAVADQEVVLASELDQEIEQIRAQFFQRGQQP 60 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 +L + ++ L+++ L+ + +GI D T++ + A ++ L + Sbjct: 61 PPADQLREQVLERLVMQRLQMGHAQGAGIQVDDATLDAAMQRIAAQNNMTLAQLRDALAQ 120 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 +G+ F++ L Q + + + EI + EY + + Sbjct: 121 EGMDMASFREDLREQITVERLQQAVVQQEVEVSPQEIEEAVEAAAAQDNMEYRVAHIRIG 180 Query: 187 IPDNKLQN--QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 P+ + + ++ + E++ E F+ GK + L L Sbjct: 181 TPEGASSDDLRAAGERAGQIREQAVDGESDFATLAETFSDAATASEGGKIGWRLPGQLPS 240 Query: 245 QFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG---GEIALKAYLSAQNTPTKIEKH 300 F +++ + P G + + D+R E ++ + E Sbjct: 241 AFADVVDGLEPGEISEPVQAADGFHIVKLIDRRSEDAQIVEETRARHILLRPGDGVEEDD 300 Query: 301 EAEYVKKLRSNAI 313 + + R Sbjct: 301 VRQRLDSFRERID 313 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 50/148 (33%), Gaps = 3/148 (2%) Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-S 230 R + + V++R+ E +++ + S Sbjct: 275 EDAQIVEETRARHILLRPGDGVEEDDVRQRLDSFRERIDEGESFEFLARQYSEEPGAEAS 334 Query: 231 IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-L 288 G + L FQ + + + P+ T+ G + + D+R+ + + Sbjct: 335 GGDIGWTRSGQLVASFQERMDELEVGEVSEPFRTEYGWHIVRVEDRRERDVTDDRRRERI 394 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + Q K ++ +++++LR A + Y Sbjct: 395 AQQIHERKSQEALEQWLRQLREEAYVDY 422 >gi|262198047|ref|YP_003269256.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliangium ochraceum DSM 14365] gi|262081394|gb|ACY17363.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliangium ochraceum DSM 14365] Length = 349 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 43/293 (14%), Positives = 103/293 (35%), Gaps = 18/293 (6%) Query: 40 SRIRTTINGEVITDGDISKRIALLKL-----------QKINGELEKIAVQELIVETLKKQ 88 R+ +N VI ++ R+A L + +L + E+I E L Q Sbjct: 53 DRVAAVVNDSVILTSELDARLAPLTAGLANINDERERARRGEQLRSQQLDEMISEELVVQ 112 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 E KS + D V+ + + GL ++ L +QG +++ + Q + + Sbjct: 113 EARKSKLNVDDKEVSAALAEIKQQNGLDDTQLAAALAQQGYSMQAYRKEVERQLLHRRAI 172 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD---A 205 + + ++ M + +R + + + + Sbjct: 173 NMLVRPRVTVTDEDVRVRYDTMSRRSAAVSKVRLKHALLSLPPNPSNELLAEAKSKAAAI 232 Query: 206 EESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVT 263 E+ ++ +++ I+ S G ++ + +++ + + P Sbjct: 233 VEAVRGGASFDDQARQYSDDINTRDSGGDLGWIERGSIATEWEVIVFSMEEGEVRGPVSG 292 Query: 264 QKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 G+ + + K DL A+K L ++ +++K ++++LR A I Sbjct: 293 PGGLHVFYVEELAKSDLEEFDAVKEQLQSEIYREEMDKEITAWLQELRDKAFI 345 >gi|94499974|ref|ZP_01306509.1| Parvulin-like peptidyl-prolyl isomerase [Oceanobacter sp. RED65] gi|94427832|gb|EAT12807.1| Parvulin-like peptidyl-prolyl isomerase [Oceanobacter sp. RED65] Length = 436 Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 120/323 (37%), Gaps = 14/323 (4%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 +K + + I+ +T +L IF V + I ++ +I + ++ +RI Sbjct: 3 MTKDKSMTTSIIQQITKTALLGIFA-VSLPLQAQIQTIDSIAAVVDDGIIMESELEQRID 61 Query: 62 LLKLQKI------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 +K Q + L+ ++ LI+E L+ Q E+SG+ +N + A+ GL Sbjct: 62 TIKRQSQGMRLPPDDILQDQVLERLIIENLQLQMAERSGMRISDEQLNQTIINIAKQNGL 121 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + +F L+K G+ ++ + + I +V + K E ++ ++ + Sbjct: 122 TLREFKKALEKDGVSYAQAREQIRRERIISEVQRYRVGSKINISEQDVDNFLNSVRGKSA 181 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIG 232 R I ++ +++ AE+ +L + + + + G Sbjct: 182 TAEEYRLGHILIQVPSQASRAQLKRAQNKAEDIVKKLRNGADFQQMAISQSEGRNALKGG 241 Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYL 288 + E++L F +++ + +NP + G I I DKR ++ Sbjct: 242 DLGWRKEAELPTLFADIVPDLKKGQVSNPIRSASGYHIIKISDKRGGDTQMVRQTKARHI 301 Query: 289 SAQNTPTKIEKHEAEYVKKLRSN 311 Q + + + + L Sbjct: 302 LIQENEIRNSQQAKKLINDLYKK 324 Score = 89.0 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 56/146 (38%), Gaps = 3/146 (2%) Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSI 231 T + I +N+++N +K I D + ++++ +S Sbjct: 289 DTQMVRQTKARHILIQENEIRNSQQAKKLINDLYKKLKNGADFDELAKEYSDDPGSKLSG 348 Query: 232 GKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLS 289 G ++ + D+ P F+ + + + P+ ++ G + + D R E + Sbjct: 349 GDLGWVNQGDMVPAFEQTMNATKKGQISEPFKSRFGWHVLQVTDYRQKDVGEEIQRNQAR 408 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIH 315 + E+ +++++R++A + Sbjct: 409 QLLYSRRFEEELPIWLRQIRADAYVE 434 >gi|86148121|ref|ZP_01066421.1| parvulin-like peptidyl-prolyl isomerase [Vibrio sp. MED222] gi|218708410|ref|YP_002416031.1| putative parvulin-like peptidyl-prolyl isomerase [Vibrio splendidus LGP32] gi|85834108|gb|EAQ52266.1| parvulin-like peptidyl-prolyl isomerase [Vibrio sp. MED222] gi|218321429|emb|CAV17381.1| putative Parvulin-like peptidyl-prolyl isomerase [Vibrio splendidus LGP32] Length = 431 Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 108/311 (34%), Gaps = 12/311 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69 + L + I SY + ++ +N VI DI + L+ Sbjct: 1 MTLWKRTLIAIAAACTLSTSYAAPVELDSVKVIVNEGVILQSDIDTSMKTLRANAKKSGQ 60 Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LI++T++ QE E+ G+ D ++ A++ + + ++ + Sbjct: 61 TLPSQDVLNEQVLEKLIIDTIQTQEAERIGVRIDDARLDQAIEGIAKDNNQTVQQLTASV 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ N F++ + + + + L E+ + T + Sbjct: 121 AEEGLSYNAFREQVRKEIAASEARNALVRRRINILPAEVDNLADILAQETNATVQYKIGH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + N Q + ++ + D E ++ + G ++ + ++ Sbjct: 181 IQLRFNDDQTKEELEAQATDLVEELNNGKDFSTMAYTYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ + P+ + G + I D + + ++ + T + Sbjct: 241 IFADQIKMQNKGSIIGPFRSGVGFHILKIEDVKGLETVAVTEVNARHILIKPTVILSDDG 300 Query: 301 EAEYVKKLRSN 311 E ++++ Sbjct: 301 AKEQLEEITRR 311 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 33/276 (11%), Positives = 89/276 (32%), Gaps = 14/276 (5%) Query: 44 TTING-EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++ I + + + + +EL + E +G F + Sbjct: 157 AEVDNLADILAQETNATVQYKIGHIQLRFNDDQTKEELEAQATDLVEELNNGKDFSTMAY 216 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 Y A G D+ ++ + + + ++ +E Sbjct: 217 TYSKGPKALQGG----DWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIEDV 272 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + R LI+ + D + + +R+ E + +++ Sbjct: 273 KGLETVAVTEVNARHILIKPTVILSDDGAKEQLEEITRRVNAGEA------SFGDLAQQY 326 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG- 279 + V G+ Y P+F++ ++ + + P+ T G + + D+R++ Sbjct: 327 SQDPGSAVQDGELGYQTPDLYVPEFKHQVETLPEGKISAPFKTVHGWHIVEVLDRREVDR 386 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + ALK K + +++++R++A + Sbjct: 387 TDSALKNKAYQILFNRKFNEEVGAWLQEVRASAFVE 422 >gi|194364448|ref|YP_002027058.1| SurA domain [Stenotrophomonas maltophilia R551-3] gi|194347252|gb|ACF50375.1| SurA domain [Stenotrophomonas maltophilia R551-3] Length = 447 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 37/321 (11%), Positives = 101/321 (31%), Gaps = 22/321 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVS-----YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK 67 + + + + + + + RI ++ +VI ++ + IA +K Q Sbjct: 1 MTKRFPVLLASLLAVSSVSAPLQVLAQEAQPLDRIAAVVDEDVILQSELQRAIANIKAQY 60 Query: 68 --------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 L + ++ L++ L+ + SGI +N A+ G + + Sbjct: 61 VGRENQLPPEDVLSRQVLERLVLVKLQVARAQGSGIRVGDQELNQAMNAIAQQNGSTLDA 120 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 L GI N F+ + + + ++ + E E+ A ++ + + +L Sbjct: 121 LRQRLAHDGIDFNDFRASVRDEITVQRLRQSFAQSRISVSEGEVDAALKQQATVGNQYHL 180 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLL 238 ++ QK+ + + +++ + + G + Sbjct: 181 AHILIAVPDGANADQIATGQKKADGVKALLDKGELDFNAAAVRYSDSPNALEGGDLGWRS 240 Query: 239 ESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDL-------GGEIALKAYLSA 290 ++ F ++ K P G + + + + RD ++ Sbjct: 241 LDEIPQAFAQMMEKMKAGEVVGPIRGPSGFQLLKLVEVRDASAAAGANTVTEYHGRHILV 300 Query: 291 QNTPTKIEKHEAEYVKKLRSN 311 + + + + LR+ Sbjct: 301 RVDDHQTDAAAKAKIDTLRAR 321 Score = 85.5 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 41/155 (26%), Gaps = 3/155 (1%) Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 E+ TV EY R +L D+ + K E Sbjct: 277 EVRDASAAAGANTVTEYHGRHIL-VRVDDHQTDAAAKAKIDTLRARIAGGADFQTVAKES 335 Query: 222 FASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 G + P F Q + + P+ T G + R Sbjct: 336 SEDSNSKGQGGDLGWFPADAFGPAFGQQVAGIQDGGVSQPFRTDAGWHILQRVATRQTDV 395 Query: 281 EIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +A + K+E ++++LR A + Sbjct: 396 TNDNQRAQVRETIGRRKLEDEYNRFLQELRGEAYV 430 >gi|319639633|ref|ZP_07994380.1| peptidyl-prolyl cis-trans isomerase [Neisseria mucosa C102] gi|317399204|gb|EFV79878.1| peptidyl-prolyl cis-trans isomerase [Neisseria mucosa C102] Length = 329 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 17/284 (5%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIEK 92 S I ++ EVIT + + +A + Q EL + + ++I ++L Q ++ Sbjct: 52 SDGIAAVVDNEVITHRQVEQAVAQARQTMPKGTQMDANELRQQVLAQMINQSLILQAGKR 111 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I + + + SA D + + Q+I + Sbjct: 112 RNIQATDSEIEAVIAHNPNIKNPSAAVRQDIADS------IIVEKVRQQAIMQ---NSRV 162 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 +E + I + + I+ Sbjct: 163 SDSEVARYIEQAKQQGITLPEADPVRQYHAQHILIKADNDNAAVGAESTIRKIYSQARSG 222 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 +++ + G + + + F+ + K + P TQ G I Sbjct: 223 ADFGGLARQYSQDSSAGNGGDLGWFADGMMVAPFEEAVHKLKPGQISAPVRTQFGWHIIK 282 Query: 272 ICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + D R+ E + + + K ++ +++L S++ + Sbjct: 283 LNDVREAGTPEERQQNAVRQYLSQQKAQQATTNLLRELHSSSYV 326 >gi|122070665|sp|Q9I5U3|SURA_PSEAE RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor Length = 417 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 108/304 (35%), Gaps = 15/304 (4%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--------QKINGELEKIA 76 ++ ++ R+ ++ +VI + +R+ + L + Sbjct: 3 AALLCSFAHAEVVPLDRVVAIVDNDVIMQSQLDQRLREVHQTLLKRGAPLPPEHVLTQQV 62 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 ++ LI+E +++Q ++SGI +N A+ G+S E F + L + G+ ++ Sbjct: 63 LERLIIENIQQQIGDRSGIRISDEELNQAMGTIAQRNGMSLEQFQTALTRDGLSYADARE 122 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + + V + + E E+ R IP + + Sbjct: 123 QVRREMVISRVRQRRVAERIQVSEQEVKNFLASDMGKIQLSEEYRLANILIPVPEAASSD 182 Query: 197 FVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK- 252 +Q + A+E +L + + ++ + + G+ + + L F +++ Sbjct: 183 VIQAAARQAQELYQQLKQGADFGQLAISRSAGDNALEGGEIGWRKAAQLPQPFDSMIGSL 242 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + T P T G + + +KR + ++ + + + E + +KL Sbjct: 243 AVGDVTEPVRTPGGFIILKLEEKRGGSKMVRDEVHVRHILLKPSEIRSEAETEKLAQKLY 302 Query: 310 SNAI 313 Sbjct: 303 ERIQ 306 Score = 92.0 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 15/139 (10%), Positives = 49/139 (35%), Gaps = 3/139 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 + ++++++ +K + E + F+ ++ G ++ Sbjct: 277 HVRHILLKPSEIRSEAETEKLAQKLYERIQSGEDFGELAKSFSEDPGSALNGGDLNWIDP 336 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKI 297 L P+F+ + Q + P+ +Q G + + +R + + K Sbjct: 337 EALVPEFRQVMNDTPQGELSKPFRSQFGWHILQVLGRRATDSSEKFREQQAVSVLRNRKY 396 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ +++++R A + Sbjct: 397 DEELQAWLRQIRDEAYVEI 415 >gi|299133711|ref|ZP_07026905.1| SurA domain protein [Afipia sp. 1NLS2] gi|298591547|gb|EFI51748.1| SurA domain protein [Afipia sp. 1NLS2] Length = 314 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 111/283 (39%), Gaps = 1/283 (0%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94 A + + +NGE IT DI +R L+ L + + +LI + LK +E +K G Sbjct: 29 PSARAQAVVVMVNGEPITTYDIEQRAKLIALTTHKSAPRQEVINQLIDDRLKIKEAKKFG 88 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 I + ++ + + G+SA+ S L QG+ K ++ + W +V+ + Sbjct: 89 INMTPSEIDSSYAAMGQRMGMSADQLSKVLMAQGVRPETMKLRMSADTAWGALVRGRYKQ 148 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 E ++ A + E + + + V ++ K E + Sbjct: 149 SLMVSEHDVRAASGGDSSPQDTESYEYHLRPVVIFVPRGSSSAVVEQRKKEAEIIRDRVQ 208 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAIC 273 C + + +I +DL + LL K+ + T P VT++G+E + +C Sbjct: 209 SCAEAATTFKSLRQGTIRDTIIKTSADLPANLRELLDKTPVGHMTPPEVTRQGIEMVVLC 268 Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 D++ + K + K E Y+ LR A+I Y Sbjct: 269 DRKVTSADTPAKRAARDKLFAQKYEAKSKSYLDDLRKAAMIEY 311 >gi|269960923|ref|ZP_06175293.1| survival protein SurA [Vibrio harveyi 1DA3] gi|269834363|gb|EEZ88452.1| survival protein SurA [Vibrio harveyi 1DA3] Length = 427 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 114/311 (36%), Gaps = 16/311 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71 + + L+ ++ + ++ +N VI DI+ + L+ Sbjct: 1 MKIWKSLLFTTLLSCGVTAAPVELDKVAVIVNDGVILQSDINTAMKTLQANARQSGKSLP 60 Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L+ V++LI++TL+ QE E+ G+ D N +N + ARN S E ++ + + Sbjct: 61 SASVLKDQVVEKLIIDTLQGQEAERIGVRIDDNRLNQAIAEIARNNNQSVEQLAASVQAE 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 G+ F++ + + + + L E+ + ++ T + + Sbjct: 121 GLSYPEFREQIRKEIAASEARNALVRRRINILPAEVDSLADQLATETNATVQYKIGHIQL 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + +++ V+ + ++ + G ++ + ++ F Sbjct: 181 RFSDDKDKSEVEAEANALVKKLKDGADFSEMAYTYSKGPKALQGGDWGWMRKEEMPTIFA 240 Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQ----NTPTKIEK 299 + +++ + P+ + G + + D + + ++ + + +K Sbjct: 241 DQIKMQNKGSIIGPFRSGIGFHILKVEDVKGLETVAVTEVNARHILIKPTVILSDEGAQK 300 Query: 300 HEAEYVKKLRS 310 E+++++++ Sbjct: 301 ELNEFIRRIKA 311 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 17/142 (11%), Positives = 47/142 (33%), Gaps = 4/142 (2%) Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY 236 R +L + + + +++ G+ Y Sbjct: 280 VNARHILIKPTVILSDEGAQKE-LNEFIRRIKAGEATFAQLATQYSQDPGSAAQNGELGY 338 Query: 237 LLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTP 294 P+F++ ++ + + P+ T G + + D+R + + A+K Sbjct: 339 QTPDLYVPEFKHQVETLPVGSISEPFKTVHGWHIVEVLDRRQVDRTDSAMKNKAYRILFN 398 Query: 295 TKIEKHEAEYVKKLRSNAIIHY 316 K + ++++LR++A + Sbjct: 399 RKFNEEAGAWMQELRASAFVEI 420 >gi|28897112|ref|NP_796717.1| survival protein SurA [Vibrio parahaemolyticus RIMD 2210633] gi|153838965|ref|ZP_01991632.1| chaperone SurA [Vibrio parahaemolyticus AQ3810] gi|260361686|ref|ZP_05774713.1| chaperone protein SurA [Vibrio parahaemolyticus K5030] gi|260896920|ref|ZP_05905416.1| chaperone protein SurA [Vibrio parahaemolyticus Peru-466] gi|260903392|ref|ZP_05911787.1| chaperone protein SurA [Vibrio parahaemolyticus AQ4037] gi|81728608|sp|Q87ST4|SURA_VIBPA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|28805321|dbj|BAC58601.1| survival protein SurA [Vibrio parahaemolyticus RIMD 2210633] gi|149747553|gb|EDM58485.1| chaperone SurA [Vibrio parahaemolyticus AQ3810] gi|308088746|gb|EFO38441.1| chaperone protein SurA [Vibrio parahaemolyticus Peru-466] gi|308109029|gb|EFO46569.1| chaperone protein SurA [Vibrio parahaemolyticus AQ4037] gi|308115514|gb|EFO53054.1| chaperone protein SurA [Vibrio parahaemolyticus K5030] gi|328471910|gb|EGF42787.1| survival protein SurA [Vibrio parahaemolyticus 10329] Length = 427 Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 113/310 (36%), Gaps = 12/310 (3%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----- 70 + + ++ ++ + + ++ +N VI DI+ + L+ Sbjct: 1 MKIWKSILFTTLLSCGAVAAPVELDKVAVIVNDGVILQSDINTAMKTLQANARQSGKSLP 60 Query: 71 ---ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L++ V++LI++TL+ QE ++ G+ D N +N + ARN S E+ ++ + + Sbjct: 61 SASVLKEQVVEKLIIDTLQGQEADRIGVRIDDNRLNQAIAEIARNNNQSVEELAASVQAE 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 G+ F++ + + + + L E+ + ++ T + + Sbjct: 121 GLSYPEFREQIRKEIAASEARNALVRRRINILPAEVDSLADQLAKETNATVQYKIGHIQL 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 Q++ V+ + K + ++ + G ++ + ++ F Sbjct: 181 RFTDGQDKSEVEAQAKALVKKLNDGADFTEMAYTYSKGPKALQGGDWGWMRKEEMPTIFA 240 Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAE 303 + +++ + P+ + G + I D + + ++ + T ++ + Sbjct: 241 DQIKMQNKGSIIGPFRSGVGFHILKIEDVKGLETVAVTEVNARHILIKPTVILSDEGAKK 300 Query: 304 YVKKLRSNAI 313 + + Sbjct: 301 QLNEFVRRIK 310 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 29/270 (10%), Positives = 77/270 (28%), Gaps = 4/270 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ L + KI +L + + ++ +N Sbjct: 151 ILPAEVDSLADQLAKETNATVQYKIGHIQLRFTDGQDKSEVEAQAKALVKKLNDGADFTE 210 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I + Sbjct: 211 MAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIEDVK 270 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKI-HD 228 TV + I + + +K++ + + +++ Sbjct: 271 GLETVAVTEVNARHILIKPTVILSDEGAKKQLNEFVRRIKAGEATFAQLASQYSQDPGSA 330 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + + P+ T G + + D+R + + A+K Sbjct: 331 AQDGELGYQTPDLYVPEFKHQVETLPVGSISEPFKTVHGWHIVEVLDRRQVDRTDSAMKN 390 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + ++++LR++A + Sbjct: 391 KAYRILFNRKFNEEAGAWMQELRASAFVEI 420 >gi|77165200|ref|YP_343725.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus oceani ATCC 19707] gi|254434050|ref|ZP_05047558.1| SurA N-terminal domain family [Nitrosococcus oceani AFC27] gi|122070652|sp|Q3JAF1|SURA_NITOC RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|76883514|gb|ABA58195.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus oceani ATCC 19707] gi|207090383|gb|EDZ67654.1| SurA N-terminal domain family [Nitrosococcus oceani AFC27] Length = 426 Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 108/309 (34%), Gaps = 17/309 (5%) Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-------- 70 V I PI S+ + RI +N +++ + ++ + + ++ Q Sbjct: 4 VLVTIFVLFWPIGSFAAI-NLDRIVAVVNEDIVLESELEQMVRTVQDQLAAQGTSLPPGY 62 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 LE+ ++ L++E L+ Q ++GI T+N + A++ GL+ F + L++ G Sbjct: 63 VLERQVLERLVMEQLQLQLAARTGIQVGDETLNEALGRIAQDNGLTLSQFRNVLEQDGYD 122 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 F++ + + I + K + + + EI K ++ I Sbjct: 123 FPAFRENIRKELIISQLHKREVNDRVSVSKAEIDNFLTNQKKRGNQDAQYHLAHILITVP 182 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQF- 246 + + VQ AE+ +L + + ++ + G + L F Sbjct: 183 EAASPEQVQAAKAKAEQVLQQLREGADFQKVAVTYSDGQQALEGGDLGWRKMGQLPTLFV 242 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEA 302 + + + + + G + + D R ++ + E+ Sbjct: 243 DVVPQLQAGDISKLIRSPSGFHIVKLLDYRGEGQQQLVTQTQARHILLRADELASEREVQ 302 Query: 303 EYVKKLRSN 311 + +LR Sbjct: 303 LRLSQLRQR 311 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 34/280 (12%), Positives = 85/280 (30%), Gaps = 10/280 (3%) Query: 46 INGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 +N V ++ +I + K + +A LI + + V Sbjct: 144 VNDRVSVSKAEIDNFLTNQKKRGNQDAQYHLA-HILITVPEAASPEQVQAAKAKAEQVLQ 202 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS---IWPDVVKNDFMLKYGNLE- 160 + A ++ +G K + P + D + Sbjct: 203 QLREGADFQKVAVTYSDGQQALEGGDLGWRKMGQLPTLFVDVVPQLQAGDISKLIRSPSG 262 Query: 161 -MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + + + + + ++L ++ VQ R+ + L Sbjct: 263 FHIVKLLDYRGEGQQQLVTQTQARHILLRADELASEREVQLRLSQLRQRILSGDDFSELA 322 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277 + + + G ++ + P+F+ ++ + P+ TQ G + + D+R Sbjct: 323 QAHSDDKASALKGGDLGWVSPGQMIPRFEEAMRSLEPGEISEPFKTQFGWHVVQVLDRRQ 382 Query: 278 LG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 E + + K+E+ ++++LR A + Y Sbjct: 383 ENMTEEFNRNRAKMEIRQRKVEEELENWLRQLRDEAYVEY 422 >gi|320157503|ref|YP_004189882.1| survival protein SurA (Peptidyl-prolyl cis-trans isomerase SurA) [Vibrio vulnificus MO6-24/O] gi|319932815|gb|ADV87679.1| survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase SurA) [Vibrio vulnificus MO6-24/O] Length = 432 Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 115/312 (36%), Gaps = 16/312 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN----- 69 + + L++ +V + + ++ +N VI DI L+ Sbjct: 4 KMNIWKTLLLGMLVTGSAVSAPVELDKVAVIVNDGVILQSDIDTATKTLRANAKKSGQAL 63 Query: 70 ---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 L + V +LI++TL+ QE ++ G+ D +N + ARN + ++ S+ + Sbjct: 64 PDADVLNEQIVDKLIIDTLQTQEADRIGVRIDDTRLNQAIEEIARNNNQTIDELSAAIAS 123 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 +G+ F++ + + + + L E+ + + T R Sbjct: 124 EGVSYAEFREQIRKEMAASEARNALVRRRINILPAEVDNLAELLSKETNASVEYRIGHIQ 183 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + Q++ ++ + K+ E + ++ + G ++ + ++ F Sbjct: 184 LRFTDGQDKSALEAQAKELVEKLKQGADFSTMAYTYSKGPKALQGGDWGWMRKEEMPTIF 243 Query: 247 QNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQ----NTPTKIE 298 + +++ + P+ + G + I D + + ++ + + + Sbjct: 244 ADQIKMQNKGSIIGPFRSGVGFHILKIEDVKGLETVAVTEVNARHILLKPTVILSDEGAQ 303 Query: 299 KHEAEYVKKLRS 310 + E+++++R+ Sbjct: 304 RELNEFIRRIRA 315 Score = 78.9 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 27/270 (10%), Positives = 75/270 (27%), Gaps = 4/270 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + +I +L + + ++ + Sbjct: 155 ILPAEVDNLAELLSKETNASVEYRIGHIQLRFTDGQDKSALEAQAKELVEKLKQGADFST 214 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I + Sbjct: 215 MAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIEDVK 274 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKI-HD 228 TV + + + + Q+ + + ++++ Sbjct: 275 GLETVAVTEVNARHILLKPTVILSDEGAQRELNEFIRRIRAGEATFGELAQQYSQDPGSA 334 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R++ + A+K Sbjct: 335 AQDGELGYQTPDLYVPEFKHQVETLPVGTISEPFKTVHGWHIVEVLDRREVDRTDSAMKN 394 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + ++++LR+ A + Sbjct: 395 KAYRILFNRKFNEEVGAWMQELRAGAFVEI 424 >gi|153820172|ref|ZP_01972839.1| survival protein SurA [Vibrio cholerae NCTC 8457] gi|126509282|gb|EAZ71876.1| survival protein SurA [Vibrio cholerae NCTC 8457] Length = 393 Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 108/313 (34%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +KL + ++ + ++ + +N VI D+ + +K + Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LI++TL++QE ++ G+ D N +N + A+N + E + + Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ F++ + + D + L E+ + + T + Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + Q++ + ++ + G ++ + ++ Sbjct: 181 IQLRVDDGQDKSTAETLANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ + P+ + G + I D + + ++ + T ++ Sbjct: 241 IFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEG 300 Query: 301 EAEYVKKLRSNAI 313 + + + Sbjct: 301 AQKQLNEFVQRIK 313 Score = 57.4 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 26/232 (11%), Positives = 65/232 (28%), Gaps = 3/232 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + KI+ +L V+ + + ++ N + Sbjct: 154 ILPAEVDTLAELLAQETDATVQYKISHIQLRVDDGQDKSTAETLANKLVNDLRNGADFAQ 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I Sbjct: 214 MAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKI-HD 228 TV + I + + QK++ + + ++++ Sbjct: 274 GLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSA 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279 G+ Y P+F++ ++ + P+ T G + + D+R++ Sbjct: 334 AQKGELGYQTPDLYVPEFKHQIETLPVGQISEPFKTVHGWHIVEVLDRREVD 385 >gi|326423746|ref|NP_759646.2| survival protein SurA [Vibrio vulnificus CMCP6] gi|121956501|sp|Q8DED4|SURA_VIBVU RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|319999108|gb|AAO09173.2| Survival protein surA precursor (Peptidyl-prolyl cis-trans isomerase surA) [Vibrio vulnificus CMCP6] Length = 428 Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 115/311 (36%), Gaps = 16/311 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------ 69 + + L++ +V + + ++ +N VI DI L+ Sbjct: 1 MNIWKTLLLGMLVTGSAVSAPVELDKVAVIVNDGVILQSDIDTATKTLRANAKKSGQALP 60 Query: 70 --GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L + V +LI++TL+ QE ++ G+ D +N + ARN + ++ S+ + + Sbjct: 61 DADVLNEQIVDKLIIDTLQTQEADRIGVRIDDTRLNQAIEEIARNNNQTIDELSAAIASE 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 G+ F++ + + + + L E+ + + T R + Sbjct: 121 GVSYAEFREQIRKEMAASEARNALVRRRINILPAEVDNLAELLSKETNASVEYRIGHIQL 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 Q++ ++ + K+ E + ++ + G ++ + ++ F Sbjct: 181 RFTDGQDKSALEAQAKELVEKLKQGADFSTMAYTYSKGPKALQGGDWGWMRKEEMPTIFA 240 Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQ----NTPTKIEK 299 + +++ + P+ + G + I D + + ++ + + ++ Sbjct: 241 DQIKMQNKGSIIGPFRSGVGFHILKIEDVKGLETVAVTEVNARHILLKPTVILSDEGAQR 300 Query: 300 HEAEYVKKLRS 310 E+++++R+ Sbjct: 301 ELNEFIRRIRA 311 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 27/270 (10%), Positives = 75/270 (27%), Gaps = 4/270 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + +I +L + + ++ + Sbjct: 151 ILPAEVDNLAELLSKETNASVEYRIGHIQLRFTDGQDKSALEAQAKELVEKLKQGADFST 210 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I + Sbjct: 211 MAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIEDVK 270 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKI-HD 228 TV + + + + Q+ + + ++++ Sbjct: 271 GLETVAVTEVNARHILLKPTVILSDEGAQRELNEFIRRIRAGEATFGELAQQYSQDPGSA 330 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R++ + A+K Sbjct: 331 AQDGELGYQTPDLYVPEFKHQVETLPVGTISEPFKTVHGWHIVEVLDRREVDRTDSAMKN 390 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + ++++LR+ A + Sbjct: 391 KAYRILFNRKFNEEVGAWMQELRAGAFVEI 420 >gi|163802667|ref|ZP_02196558.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Vibrio sp. AND4] gi|159173555|gb|EDP58375.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Vibrio sp. AND4] Length = 427 Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 111/310 (35%), Gaps = 12/310 (3%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71 + + LI+ ++ + A ++ +N VI DI + L+ Sbjct: 1 MKIWKSLIVTTLLSCGVTAAPAELDKVAVIVNDGVILQSDIDTAMKTLQANARQSGKSLP 60 Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L++ V++LI++TL+ QE ++ G+ D N +N + ARN S E ++ + + Sbjct: 61 SAGVLKEQVVEKLIIDTLQGQEAKRIGVRIDDNRLNQAIAEIARNNNQSVEQLAASVQME 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 G+ + F++ + + + + L E+ + ++ T + + Sbjct: 121 GLNYSEFREQIRKEIAASEARNALVRRRINILPAEVDSLTDQLAQETNATVQYKIGHIQL 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + +++ V+ + ++ + G ++ + ++ F Sbjct: 181 RFSDDKDKSEVEAEANALVKKLKAGADFSEMAYTYSKGPKALQGGDWGWMRKEEMPTIFA 240 Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAE 303 + +++ N P+ + G + I D + + ++ + T + + Sbjct: 241 DQIKMQNKGNIIGPFRSGIGFHILKIEDVKGLETVAVTEVNARHILIKPTVILSDDGAKK 300 Query: 304 YVKKLRSNAI 313 + + Sbjct: 301 ELNEFIRRIK 310 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 17/140 (12%), Positives = 50/140 (35%), Gaps = 3/140 (2%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238 + P L + G ++ + + +++ G+ + Sbjct: 281 NARHILIKPTVILSDDGAKKELNEFIRRIKAGEASFGQLATQYSQDPGSAAQNGELGFQT 340 Query: 239 ESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTK 296 P+F++ ++ + + P+ T G + + D+R + + A+K K Sbjct: 341 PDLYVPEFKHQVETLPVGSISEPFKTVHGWHIVEVLDRRQVDRTDSAIKNKAYRILFNRK 400 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 + ++++LR++A + Sbjct: 401 FNEEAGAWMQELRASAFVEI 420 >gi|121956507|sp|Q7MP84|SURA_VIBVY RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor Length = 428 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 115/311 (36%), Gaps = 16/311 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------ 69 + + L++ +V + + ++ +N VI DI L+ Sbjct: 1 MNIWKTLLLGMLVTGSAVSAPVELDKVAVIVNDGVILQSDIDTATKTLRANAKKSGQALP 60 Query: 70 --GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L + V +LI++TL+ QE ++ G+ D +N + ARN + ++ S+ + + Sbjct: 61 DADVLNEQIVDKLIIDTLQTQEADRIGVRIDDTRLNQAIEEIARNNNQTIDELSAAIASE 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 G+ F++ + + + + L E+ + + T R + Sbjct: 121 GVSYEEFREQIRKEMAASEARNALVRRRINILPAEVDNLAELLSKETNASVEYRIGHIQL 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 Q++ ++ + K+ E + ++ + G ++ + ++ F Sbjct: 181 RFTDGQDKSALEAQAKELVEKLKQGADFSTMAYTYSKGPKALQGGDWGWMRKEEMPTIFA 240 Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQ----NTPTKIEK 299 + +++ + P+ + G + I D + + ++ + + ++ Sbjct: 241 DQIKMQNKGSIIGPFRSGVGFHILKIEDVKGLETVAVTEVNARHILLKPTVILSDEGAQR 300 Query: 300 HEAEYVKKLRS 310 E+++++R+ Sbjct: 301 ELNEFIRRIRA 311 Score = 78.9 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 27/270 (10%), Positives = 75/270 (27%), Gaps = 4/270 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + +I +L + + ++ + Sbjct: 151 ILPAEVDNLAELLSKETNASVEYRIGHIQLRFTDGQDKSALEAQAKELVEKLKQGADFST 210 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I + Sbjct: 211 MAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIEDVK 270 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKI-HD 228 TV + + + + Q+ + + ++++ Sbjct: 271 GLETVAVTEVNARHILLKPTVILSDEGAQRELNEFIRRIRAGEATFGELAQQYSQDPGSA 330 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R++ + A+K Sbjct: 331 AQDGELGYQTPDLYVPEFKHQVETLPVGTISEPFKTVHGWHIVEVLDRREVDRTDSAMKN 390 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + ++++LR+ A + Sbjct: 391 KAYRILFNRKFNEEVGAWMQELRAGAFVEI 420 >gi|260878025|ref|ZP_05890380.1| chaperone protein SurA [Vibrio parahaemolyticus AN-5034] gi|308089886|gb|EFO39581.1| chaperone protein SurA [Vibrio parahaemolyticus AN-5034] Length = 427 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 112/310 (36%), Gaps = 12/310 (3%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----- 70 + + ++ ++ + + ++ +N VI DI+ + L+ Sbjct: 1 MKIWKSILFTTLLSCGAVAAPVELDKVAVIVNDGVILQSDINTAMKTLQANARQSGKSLP 60 Query: 71 ---ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L++ V++LI++TL+ QE ++ G+ D N +N + ARN S E+ ++ + + Sbjct: 61 SASVLKEQVVEKLIIDTLQGQEADRIGVRIDDNRLNQAIAEIARNNNQSVEELAASVQAE 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 G+ F++ + + + + L E+ + ++ T + + Sbjct: 121 GLSYPEFREQIRKEIAASEARNALVRRRINILPAEVDSLADQLAKETNATVQYKIGHIQL 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 Q++ V+ + K + ++ + G ++ + ++ F Sbjct: 181 RFTDGQDKSEVEAQAKALVKKLNDGADFTEMAYTYSKGPKALQGGDWGWMRKEEMPTIFA 240 Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAE 303 + +++ + P+ + G + I D + + ++ + T ++ Sbjct: 241 DQIKMQNKGSIIGPFRSGVGFHILKIEDVKGLETVAVTEVNARHILIKPTVILSDEGAKN 300 Query: 304 YVKKLRSNAI 313 + + Sbjct: 301 QLNEFVRRIK 310 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 50/140 (35%), Gaps = 3/140 (2%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238 + P L ++G + + + +++ G+ Y Sbjct: 281 NARHILIKPTVILSDEGAKNQLNEFVRRIKAGEATFAQLASQYSQDPGSAAQDGELGYQT 340 Query: 239 ESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTK 296 P+F++ ++ + + P+ T G + + D+R + + A+K K Sbjct: 341 PDLYVPEFKHQVETLPVGSISEPFKTVHGWHIVEVLDRRQVDRTDSAMKNKAYRILFNRK 400 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 + ++++LR++A + Sbjct: 401 FNEEAGAWMQELRASAFVEI 420 >gi|253698853|ref|YP_003020042.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21] gi|251773703|gb|ACT16284.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21] Length = 317 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 92/295 (31%), Gaps = 13/295 (4%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------GELEKIAVQELIVETLKK 87 + S I +N E+IT ++ K ++ + L A+ L+ L + Sbjct: 21 STAKPVSGIAAIVNDEIITTLELDKEYLQIQKEADKVPASDKSGLRGAALNRLVERKLIE 80 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 Q+I + I V + L+ E+ L QG+ ++ L Q + Sbjct: 81 QKIRELNINVSDEEVRLAIEDVKKQNNLTQENLEQALATQGMTFAQYRIQLKEQLERLRL 140 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ---NQGFVQKRIKD 204 + + K E E+ Q + +K + R + Sbjct: 141 MSQEVRSKVQVGEREMREYYQANIAAYGGSEVFSARHIFFKVDKKGGAGELSKAEARANE 200 Query: 205 AEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYV 262 ++++ G ++D+ + ++ Sbjct: 201 VLAKARAGEDFAALAKQYSDDPAAAKDGGDLGTFKKADMLPEIGDTVAAMQPGEVSSVVR 260 Query: 263 TQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + G+ I + K+ +K + K ++ A++VK+LR++A I Sbjct: 261 SPSGLHIIKLEGKKQDAGRPFEEVKDSIEDTLYKKKSDERFAQWVKELRASAAIE 315 >gi|220935878|ref|YP_002514777.1| SurA domain protein [Thioalkalivibrio sp. HL-EbGR7] gi|219997188|gb|ACL73790.1| SurA domain protein [Thioalkalivibrio sp. HL-EbGR7] Length = 443 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 103/315 (32%), Gaps = 18/315 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKS---WAMSSRIRTTINGEVITDGDISKRIALLKLQK---- 67 L + L + P+ A I + +VI ++ R+ ++ Q Sbjct: 9 FLLSAMALTLALAWPLQGLAQRADDAPLDHIVALVEDDVIMHSELQNRLDTVRQQILSRG 68 Query: 68 ----INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 + L ++ LI+E L+ Q+ ++GI D T+N + AR +S +F Sbjct: 69 GRLPPDDVLIPQVLERLIIERLQLQQATRAGIRIDDITLNQTMERIARENSMSLPEFRDR 128 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 L GI F++ + + + + + E EI R+ R Sbjct: 129 LVADGIDFQVFREQIRDEMTIGQLRRRQVENRIQVSEQEIDDLIASESGAIDRDVEYRLS 188 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLES 240 +P + N +Q + AE R R ++ + G + + Sbjct: 189 HILVPLPEGANAADIQAARERAEAIRKRAVAGENFSELALSESAGQQALEGGDLGWRAAA 248 Query: 241 DLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRD---LGGEIALKAYLSAQNTPTK 296 + F + + + + G I + ++R ++ Q T Sbjct: 249 QVPTLFARNVVLMREGEVSELIRSPSGFHLIKLQERRGGERAQITQTHARHILIQPTAIL 308 Query: 297 IEKHEAEYVKKLRSN 311 ++ E + LR+ Sbjct: 309 SQEDARERIAGLRNR 323 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 36/282 (12%), Positives = 87/282 (30%), Gaps = 17/282 (6%) Query: 46 INGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +++ +I IA +G +++ L + E + + Sbjct: 157 VENRIQVSEQEIDDLIA-----SESGAIDRDVEYRLSHILVPLPEGANAADIQAARERAE 211 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + A +E S Q + + A + +N +++ G + I Sbjct: 212 AIRKRAVAGENFSELALSESAGQQALEGGDLGWRAAAQVPTLFARNVVLMREGEVSELIR 271 Query: 165 ANKQKMKNITVREY--------LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + I + +Q ++RI L Sbjct: 272 SPSGFHLIKLQERRGGERAQITQTHARHILIQPTAILSQEDARERIAGLRNRILMGNDFA 331 Query: 217 NKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICD 274 + + + G + DL PQF+ ++ + N + P+++ G + + D Sbjct: 332 DLARAHSDDRGSAMRGGDLGWTDPGDLVPQFEEVMNALAPNTLSEPFLSPFGWHIVEVLD 391 Query: 275 KRD-LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 +R ++A K E+ ++++LR A + Sbjct: 392 RRTYDSSRQLMRAQAREIIRERKREEETELWLRRLRDEAYVE 433 >gi|254229741|ref|ZP_04923149.1| ppic-type ppiase domain protein [Vibrio sp. Ex25] gi|262392437|ref|YP_003284291.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio sp. Ex25] gi|151937708|gb|EDN56558.1| ppic-type ppiase domain protein [Vibrio sp. Ex25] gi|262336031|gb|ACY49826.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio sp. Ex25] Length = 427 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 112/310 (36%), Gaps = 12/310 (3%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71 + + ++ ++ + + ++ +N VI DI + L+ Sbjct: 1 MKIWKSILFTTLLSCGAVAAPVEIDKVAVIVNDGVILQSDIETAMKTLQANARQSGKSLP 60 Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L++ V++LI++TL+ QE ++ G+ D N +N + ARN S E ++ ++ + Sbjct: 61 SASVLKEQVVEKLIIDTLQGQEADRIGVRIDDNRLNQAIAEIARNNEQSVEQLAASVESE 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 G+ F++ + + + + L E+ + +++ T + + Sbjct: 121 GLSYPEFREQIRKEIAASEARNALVRRRINILPAEVDSLAEQLSQETNATVQYKIGHIQL 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + + + V+ K + ++ + G ++ + ++ F Sbjct: 181 RFSDDKEKSAVEAEAKALAKKLNEGADFTEMAYTYSKGPKALQGGDWGWMRKEEMPTIFA 240 Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAE 303 + +++ + P+ + G + I D + + ++ + T ++ + Sbjct: 241 DQIKMQNKGSIIGPFRSGVGFHILKIEDVKGLETVAVTEVNARHILIKPTVILSDEGAKK 300 Query: 304 YVKKLRSNAI 313 + + Sbjct: 301 QLNEFVRRIK 310 Score = 78.9 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 30/270 (11%), Positives = 79/270 (29%), Gaps = 4/270 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ L + KI +L K++ ++ + +N Sbjct: 151 ILPAEVDSLAEQLSQETNATVQYKIGHIQLRFSDDKEKSAVEAEAKALAKKLNEGADFTE 210 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I + Sbjct: 211 MAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIEDVK 270 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKI-HD 228 TV + I + + +K++ + + +++ Sbjct: 271 GLETVAVTEVNARHILIKPTVILSDEGAKKQLNEFVRRIKAGEATFAQLATQYSQDPGSA 330 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + + P+ T G + + D+R + + A+K Sbjct: 331 AQDGELGYQTPDLYVPEFKHQVETLPVGSISEPFKTVHGWHIVEVLDRRQVDRTDSAMKN 390 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + ++++LR++A + Sbjct: 391 KAYRILFNRKFNEEAGAWMQELRASAFVEI 420 >gi|116748015|ref|YP_844702.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophobacter fumaroxidans MPOB] gi|116697079|gb|ABK16267.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophobacter fumaroxidans MPOB] Length = 353 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 39/291 (13%), Positives = 92/291 (31%), Gaps = 17/291 (5%) Query: 43 RTTINGEVITDGDISKRIALLKLQK----------INGELEKIAVQELIVETLKKQEIEK 92 +NG VIT + + Q E++K + L+ + KQ+ K Sbjct: 61 VAVVNGTVITRAEYESETKRFERQMAMSGQAPDGAQVAEMKKKVLDGLVGREVLKQQAAK 120 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 G+ D V+ + E + + + + K ++ Sbjct: 121 LGVKVDPAEVDKEIATLKQRFPNEDEFKKALKNLN-LTEESLKAQFTQDLGIRKMIDEQV 179 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK---LQNQGFVQKRIKDAEESR 209 K E + ++R I + ++ ++RI A++ Sbjct: 180 ASKITITPEETKKFYDGNPELFKTPEMVRASHVLIKVDPKAGDADKAKAKERITAAQKKV 239 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVE 268 ++ + G + + F+ + ++ TQ G Sbjct: 240 QAGEDFAKVAKEVSECPSAAKGGDLDFFQRGQMVGPFEQAAFALKVGSVSDIVETQFGYH 299 Query: 269 YIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 I + DK++ G +K ++ ++ + A+Y+++L++ A I + Sbjct: 300 VIKVTDKKEAGVMKYDEIKDRIAQHLKQDRVNQQLAKYIEELKAQAKIEIF 350 >gi|254447632|ref|ZP_05061098.1| chaperone SurA [gamma proteobacterium HTCC5015] gi|198262975|gb|EDY87254.1| chaperone SurA [gamma proteobacterium HTCC5015] Length = 442 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 32/313 (10%), Positives = 106/313 (33%), Gaps = 14/313 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---- 68 + + +++ F ++ + +RI ++ ++I + ++ ++ +K + Sbjct: 1 MMTMIARLLILFFLFATPLAQAEPQVLARIAAVVDTDIILEQEMLDELSRVKARIQASGQ 60 Query: 69 ----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + L++ ++ LIV+ ++ Q ++ GI D +N + A G+S F + + Sbjct: 61 TPPPDEILKRQVLEHLIVKEVQMQAADRVGINVDDTFLNEQLQRIASENGMSLAQFKAKI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + +G+ +++ L + + + + E E+ + + + Sbjct: 121 ESEGMDYVEYREMLREEMKIQQLRQRTVYDRVVVSEQEVDDYLAQNPVGSESVEYQLGHI 180 Query: 185 FSIPDNKL--QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + +K + E + + + + G +L + + Sbjct: 181 LVGTPEAATPEQVDTARKEADNLYEQIKQGARFSQLALSHSDGQRALDGGDLGWLPQGRV 240 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG---GEIALKAYLSAQNTPTKIE 298 F + + + + P + G + + R + ++ + Sbjct: 241 PSLFLEAIESLQKGQVSRPIRSPSGFHLVQLKGVRGDERRVIQQVRARHILLTPNAVLSD 300 Query: 299 KHEAEYVKKLRSN 311 + + + +LR Sbjct: 301 EQARQKIAELRRR 313 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 14/126 (11%), Positives = 41/126 (32%), Gaps = 2/126 (1%) Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 ++ QK + + + G + + P F+ +++ Sbjct: 299 SDEQARQKIAELRRRIVEADESFAELAKAHSIDGSAAQGGDLGWAAPREYVPAFRQVVET 358 Query: 253 SQ-NNTTNPYVTQKGVEYIAICDKRD-LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 N + P+ + G + + ++R + + + K + E ++++LR Sbjct: 359 LPLNTLSEPFRSDFGWHIVEVLERRQYDETDEYRRGMARQELRKMKASEEEELWLRRLRD 418 Query: 311 NAIIHY 316 + Y Sbjct: 419 QTYVEY 424 >gi|156973131|ref|YP_001444038.1| hypothetical protein VIBHAR_00810 [Vibrio harveyi ATCC BAA-1116] gi|156524725|gb|ABU69811.1| hypothetical protein VIBHAR_00810 [Vibrio harveyi ATCC BAA-1116] Length = 427 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 108/310 (34%), Gaps = 12/310 (3%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----- 70 + + L+ ++ + ++ +N VI DI + L+ Sbjct: 1 MKIWKSLLFTALLSCGVTAAPVELDKVAVIVNDGVILQSDIDTAMKTLQANARQSGKSLP 60 Query: 71 ---ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L+ V++LI++TL+ QE E+ G+ D N +N + ARN S E ++ + + Sbjct: 61 SASVLKDQVVEKLIIDTLQGQEAERIGVRIDDNRLNQAIAEIARNNNQSVEQLAASVQAE 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 G+ + F++ + + + + L E+ + ++ T + + Sbjct: 121 GLSYSEFREQIRKEIAASEARNALVRRRINILPAEVDSLADQLAKETNATVQYKIGHIQL 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + +++ V+ + ++ + G ++ + ++ F Sbjct: 181 RFSDDKDKSEVEAEANALVKKLKDGADFSEMAYTYSKGPKALQGGDWGWMRKEEMPTIFA 240 Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAE 303 + +++ + P+ + G + I D + + ++ + T + + Sbjct: 241 DQIKMQNKGSIIGPFRSGIGFHILKIEDVKGLETVAVTEVNARHILIKPTVILSDDGAKK 300 Query: 304 YVKKLRSNAI 313 + + Sbjct: 301 ELNEFIRRIK 310 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 50/140 (35%), Gaps = 3/140 (2%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238 + P L + G ++ + + +++ G+ Y Sbjct: 281 NARHILIKPTVILSDDGAKKELNEFIRRIKAGEATFGQLATQYSQDPGSAAQNGELGYQT 340 Query: 239 ESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTK 296 P+F++ ++ + + P+ T G + + D+R + + A+K K Sbjct: 341 PDLYVPEFKHQVETLPVGSISAPFKTVHGWHIVEVLDRRQVDRTDSAMKNKAYRILFNRK 400 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 + ++++LR++A + Sbjct: 401 FNEEAGAWMQELRASAFVEI 420 >gi|91790684|ref|YP_551636.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas sp. JS666] gi|122070654|sp|Q121Q4|SURA_POLSJ RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|91699909|gb|ABE46738.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas sp. JS666] Length = 473 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 97/292 (33%), Gaps = 18/292 (6%) Query: 38 MSSRIRTTINGEVITDGDI--------SKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + I +N E IT+ ++ + I EL ++ LI + + Q Sbjct: 66 QADFIVAVVNSEPITNSEVRTKLVRTEQQIIQQGSPLPPRRELVPQVLERLISDKAQLQL 125 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 +G+ D N V AR +S ++ L GI + F+ L + + + + Sbjct: 126 ARSAGMRVDDNAVEAAVQTVARQNQISVDELRRRLKADGIAYSQFESDLRDELLVSRLRQ 185 Query: 150 NDFMLKYGNLEMEIPANKQKMK---NITVREYLIRTVLFSIPDNKLQ-NQGFVQKRIKDA 205 + L+ E +I ++ + ++ + +L ++P+N +Q + + Sbjct: 186 REVDLRVTVTEQDIDQFLREQEGGTELSSLALNLAQILVAVPENATPGQVAALQAKAQQV 245 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQ 264 + +F+ + G P F ++ P + Sbjct: 246 MDKARGGADFAALANEFSDSPTRGTGGLMGLREADRYPPLFVESTKSLKVGGLAGPIRSG 305 Query: 265 KGVEYIAICDKRDLG-----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 G + + +KR G ++ + +P + E E + LR Sbjct: 306 AGFHILKVIEKRQAGMPGSVITQTHARHILLRLSPKQGETAATEKLAALRKR 357 Score = 96.3 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 83/279 (29%), Gaps = 17/279 (6%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 +T+ DI + L+ Q+ EL +A+ L + E G + A Sbjct: 194 VTEQDIDQ---FLREQEGGTELSSLALN-LAQILVAVPENATPGQVAALQAKAQQVMDKA 249 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------FMLKYGNL 159 R A + F D G P V++ G Sbjct: 250 RGGADFAALANEFSDSPTRGTGGLMGLREADRYPPLFVESTKSLKVGGLAGPIRSGAGFH 309 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 +++ +Q +V + K +K + Sbjct: 310 ILKVIEKRQAGMPGSVITQTHARHILLRLSPKQGETAATEKLAALRKRILAGQADFAALA 369 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + + G + P+F+ ++ + N ++P V++ GV I + ++R+ Sbjct: 370 RENSEDASAKQGGDLGWANPGMFVPEFEKVMNGLAPNQISDPLVSRFGVHLIQVLERREA 429 Query: 279 GGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + K E+ + +++R A + Y Sbjct: 430 QMSQRDQREMARNVLRGKKQEEAYVLWAQEVRGRAYVEY 468 >gi|68249060|ref|YP_248172.1| survival protein SurA-like protein [Haemophilus influenzae 86-028NP] gi|68057259|gb|AAX87512.1| survival protein SurA homolog [Haemophilus influenzae 86-028NP] Length = 313 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 110/318 (34%), Gaps = 20/318 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K+ + + V++ S A R+ T++G I + + + Sbjct: 1 MKMKKFILKSFLLATLGCVAFTSMAQAEERVVATVDGIPILESQV-------RANMGKKG 53 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + A+ ++I + L ++ I++SG+ D ++ A GL+ F LD QGI Sbjct: 54 DRQSALDKIIDDLLVQKAIQESGVKIDPREIDRVVEDTAARNGLTYGQFLDALDYQGISL 113 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI---------PANKQKMKNITVREYLIRT 182 N F+Q +A Q + V E+ A Q + Sbjct: 114 NTFRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLDEAKSQGTAQKVTGKEYEVR 173 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY-LLES 240 + + L + ++ K + + K++ + G Y E+ Sbjct: 174 HILLKLNPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 233 Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEK 299 Q ++K Q + P+ T+ G + + RD + T+++ Sbjct: 234 YAPQFAQTVMKSKQGVISAPFKTEFGWHILEVTGVRDGDLTAEAYTQKAYERLVNTQLQD 293 Query: 300 HEAEYVKKLRSNAIIHYY 317 ++VK LR A I Y+ Sbjct: 294 ATNDWVKALRKRANIQYF 311 >gi|261380640|ref|ZP_05985213.1| putative cis-trans isomerase [Neisseria subflava NJ9703] gi|284796620|gb|EFC51967.1| putative cis-trans isomerase [Neisseria subflava NJ9703] Length = 329 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 36/284 (12%), Positives = 86/284 (30%), Gaps = 17/284 (5%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIEK 92 S I ++ EVIT +++ +A + Q EL + + ++I ++L Q ++ Sbjct: 52 SDGIAAVVDNEVITHRQVAQAVAQARQTMPKGTQMDANELRQQVLAQMINQSLILQAGKR 111 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I + + + SA D + + Q+I + Sbjct: 112 RNIQATDSEIEAVIAHNPNIKNPSAAVRQDIADS------IIVEKVRQQAIMQ---NSRV 162 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 +E + I + + I+ Sbjct: 163 SDSEVARYIEQAKQQGITLPEADPVRQYHAQHILIKADNDNAAVGAESTIRKIYSQARSG 222 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 +++ + G + + + F+ + K + P TQ G I Sbjct: 223 ADFGGLARQYSQDGSAGNGGDLGWFADGMMVAPFEEAVHKLKPGQISAPVRTQFGWHIIK 282 Query: 272 ICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + D R+ E + + + K ++ +++L S++ + Sbjct: 283 LNDVREAGTPEERQQNAVRQYLSQQKAQQATTNLLRELHSSSYV 326 >gi|90020386|ref|YP_526213.1| L-ribulokinase [Saccharophagus degradans 2-40] gi|121956457|sp|Q21MS8|SURA_SACD2 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|89949986|gb|ABD80001.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Saccharophagus degradans 2-40] Length = 430 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 100/315 (31%), Gaps = 15/315 (4%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 IK F I F + R+ ++ IT ++ R+ ++++ Sbjct: 3 IIKTTIATFTAIAFTGAASFTSAEVVPLDRVVAVVDNRAITQTELDSRVQDVQVRSQAAG 62 Query: 72 LE--------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 + K + +LI ETL+ + ++ G+ VN +N ++ + F Sbjct: 63 MRLPEADILNKQIIDQLISETLQLEMADRYGVQVSDQEVNASIGNIIQNAQMTEQQFVQQ 122 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 L +G+ N F+ + Q + + + E E+ + Sbjct: 123 LASEGVSINEFRASIRRQLTMRSITEGLVSRRIRISEQEVDNFLKSADAQFWVSPDYHLG 182 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLLES 240 + + + + + A +L N E ++ + G + + Sbjct: 183 HILVALPSSPSSEAIVEAEEKANALYEKLKAGANFAEVAIAESNGPSALQGGDLGWRKSA 242 Query: 241 DLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTK 296 +L F + L + + T P +Q G I + + R ++ + + Sbjct: 243 ELPTLFAELLPSLNNGDVTKPTRSQAGFHIIKLYESRGGQKQIVNQTRARHILVKTSEIL 302 Query: 297 IEKHEAEYVKKLRSN 311 + +K +R Sbjct: 303 NDAKAEAKLKDIRQQ 317 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 49/147 (33%), Gaps = 3/147 (2%) Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSI 231 R + +++ N + ++KD + L + + I +S Sbjct: 282 QKQIVNQTRARHILVKTSEILNDAKAEAKLKDIRQQILDGADFAELAKTHSEDIGSRMSG 341 Query: 232 GKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLS 289 G + P F+ + + + + P+ ++ G + + ++R+ + Sbjct: 342 GDLGWATPGTFVPAFEKTMAETKEGEISQPFKSRFGWHIMKVEERREEDMTQEALRQKAR 401 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + E ++++LR A I Sbjct: 402 NMIMSRRFEDETQIWLQELRDEAFIDI 428 >gi|84393693|ref|ZP_00992443.1| parvulin-like peptidyl-prolyl isomerase [Vibrio splendidus 12B01] gi|84375692|gb|EAP92589.1| parvulin-like peptidyl-prolyl isomerase [Vibrio splendidus 12B01] Length = 431 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 110/311 (35%), Gaps = 12/311 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69 + L + I VSY + ++ +N VI DI + L+ Sbjct: 1 MTLWKRTLIAIAAACTVSVSYAAPVELDSVKVIVNEGVILQSDIDASMKTLRANAKKSGQ 60 Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LI++T++ QE E+ G+ D ++ A++ + E ++ + Sbjct: 61 TLPSQDVLNEQVLEKLIIDTIQTQEAERIGVRIDDARLDQAIEGIAKDNNQTVEQLTASV 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ N F++ + + + + L E+ + T + Sbjct: 121 AEEGLSYNAFREQVRKEIAASEARNALVRRRINILPAEVDNLADILAQETNATVQYKIGH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + N Q + ++ + K+ E ++ + G ++ + ++ Sbjct: 181 IQLRFNDDQTKEELEAQAKEVVEELNSGKDFSTMAYTYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ + P+ + G + I D + + ++ + T + Sbjct: 241 IFADQIKMQNKGSIIGPFRSGVGFHILKIEDVKGLETVAVTEVNARHILIKPTVILSDYG 300 Query: 301 EAEYVKKLRSN 311 E ++++ Sbjct: 301 AKEQLEEITRR 311 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 33/276 (11%), Positives = 88/276 (31%), Gaps = 14/276 (5%) Query: 44 TTING-EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++ I + + + + +EL + + E SG F + Sbjct: 157 AEVDNLADILAQETNATVQYKIGHIQLRFNDDQTKEELEAQAKEVVEELNSGKDFSTMAY 216 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 Y A G D+ ++ + + + ++ +E Sbjct: 217 TYSKGPKALQGG----DWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIEDV 272 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + R LI+ + + + +R+ E +++ Sbjct: 273 KGLETVAVTEVNARHILIKPTVILSDYGAKEQLEEITRRVNAGEA------SFGELAQQY 326 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG- 279 + V G+ Y P+F++ ++ + + P+ T G + + D+R++ Sbjct: 327 SQDPGSAVQDGELGYQTPDLYVPEFKHQVETLPEGKISAPFKTVHGWHIVEVLDRREVDR 386 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + ALK K + +++++R++A + Sbjct: 387 TDSALKNKAYQILFNRKFNEEAGAWLQEVRASAFVE 422 >gi|148977503|ref|ZP_01814092.1| parvulin-like peptidyl-prolyl isomerase [Vibrionales bacterium SWAT-3] gi|145963298|gb|EDK28564.1| parvulin-like peptidyl-prolyl isomerase [Vibrionales bacterium SWAT-3] Length = 431 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 109/311 (35%), Gaps = 12/311 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69 + L + I S+ +R +N VI DI + L+ Sbjct: 1 MTLWKRTLIAIAAACTVSTSFADPVELDSVRVIVNEGVILQSDIDTSMKTLRANAKKSGQ 60 Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L++ +++LI++T++ QE E+ G+ D ++ A++ + E ++ + Sbjct: 61 TLPSQDVLDEQVLEKLIIDTIQTQEAERIGVRIDDARLDQAIEGIAKDNNQTVEQLTASV 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ N F++ + + + + L E+ + T + Sbjct: 121 AEEGLSYNAFREQVRKEIAASEARNALVRRRINILPAEVDNLADILAQETNATVQYKIGH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + N Q + ++ + K+ E ++ + G ++ + ++ Sbjct: 181 IQLRFNDDQTKEELEAQAKELVEELNSGKDFSTMAYTYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ + P+ + G + I D + + ++ + T + Sbjct: 241 IFADQIKMQNKGSIIGPFRSGVGFHILKIEDVKGLETVAVTEVNARHILIKPTVILSDDG 300 Query: 301 EAEYVKKLRSN 311 E ++++ Sbjct: 301 AKEQLEEITRR 311 Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 29/276 (10%), Positives = 87/276 (31%), Gaps = 14/276 (5%) Query: 44 TTING-EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++ I + + + + +EL + + E SG F + Sbjct: 157 AEVDNLADILAQETNATVQYKIGHIQLRFNDDQTKEELEAQAKELVEELNSGKDFSTMAY 216 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 Y A G D+ ++ + + + ++ +E Sbjct: 217 TYSKGPKALQGG----DWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIE-- 270 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + +T + ++ + + +++ + +++ Sbjct: 271 -DVKGLETVAVTEVNARHILIKPTVILSDDGAKEQLEEITRRVNAGEASFGDM---AQQY 326 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG- 279 + V G+ Y P+F++ ++ + + P+ T G + + D+R++ Sbjct: 327 SQDPGSAVQDGELGYQTPDLYVPEFKHQVETLPEGKISAPFKTVHGWHIVEVLDRREVDR 386 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + ALK K + +++++R++A + Sbjct: 387 TDSALKNKAYQILFNRKFNEEAGAWLQEVRASAFVE 422 >gi|37678664|ref|NP_933273.1| parvulin-like peptidyl-prolyl isomerase [Vibrio vulnificus YJ016] gi|37197404|dbj|BAC93244.1| parvulin-like peptidyl-prolyl isomerase [Vibrio vulnificus YJ016] Length = 443 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 115/312 (36%), Gaps = 16/312 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN----- 69 + + L++ +V + + ++ +N VI DI L+ Sbjct: 15 KMNIWKTLLLGMLVTGSAVSAPVELDKVAVIVNDGVILQSDIDTATKTLRANAKKSGQAL 74 Query: 70 ---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 L + V +LI++TL+ QE ++ G+ D +N + ARN + ++ S+ + Sbjct: 75 PDADVLNEQIVDKLIIDTLQTQEADRIGVRIDDTRLNQAIEEIARNNNQTIDELSAAIAS 134 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 +G+ F++ + + + + L E+ + + T R Sbjct: 135 EGVSYEEFREQIRKEMAASEARNALVRRRINILPAEVDNLAELLSKETNASVEYRIGHIQ 194 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + Q++ ++ + K+ E + ++ + G ++ + ++ F Sbjct: 195 LRFTDGQDKSALEAQAKELVEKLKQGADFSTMAYTYSKGPKALQGGDWGWMRKEEMPTIF 254 Query: 247 QNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQ----NTPTKIE 298 + +++ + P+ + G + I D + + ++ + + + Sbjct: 255 ADQIKMQNKGSIIGPFRSGVGFHILKIEDVKGLETVAVTEVNARHILLKPTVILSDEGAQ 314 Query: 299 KHEAEYVKKLRS 310 + E+++++R+ Sbjct: 315 RELNEFIRRIRA 326 Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 27/270 (10%), Positives = 75/270 (27%), Gaps = 4/270 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + +I +L + + ++ + Sbjct: 166 ILPAEVDNLAELLSKETNASVEYRIGHIQLRFTDGQDKSALEAQAKELVEKLKQGADFST 225 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I + Sbjct: 226 MAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIEDVK 285 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKI-HD 228 TV + + + + Q+ + + ++++ Sbjct: 286 GLETVAVTEVNARHILLKPTVILSDEGAQRELNEFIRRIRAGEATFGELAQQYSQDPGSA 345 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R++ + A+K Sbjct: 346 AQDGELGYQTPDLYVPEFKHQVETLPVGTISEPFKTVHGWHIVEVLDRREVDRTDSAMKN 405 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + ++++LR+ A + Sbjct: 406 KAYRILFNRKFNEEVGAWMQELRAGAFVEI 435 >gi|77917707|ref|YP_355522.1| parvulin-like peptidyl-prolyl isomerase [Pelobacter carbinolicus DSM 2380] gi|77543790|gb|ABA87352.1| parvulin-like peptidyl-prolyl isomerase [Pelobacter carbinolicus DSM 2380] Length = 316 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 54/313 (17%), Positives = 105/313 (33%), Gaps = 14/313 (4%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------- 67 Y +L I ++ S S SRI +N ++IT + + I + + Sbjct: 1 MKYLILSIALLMLATSPLSAETISRIAAIVNQDIITTAQLDREIDKMLSAEAQETGITPV 60 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 EL + +LI +TL Q IEK G+ V ++ E L Q Sbjct: 61 QREELRHKMLDKLIEDTLLNQRIEKLGLHVSDEAVEQAINDVQAQNNITREQLKQALVAQ 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 GI + +++ L Q + ++ + K E+ + + + +R + Sbjct: 121 GINFDDYRERLRQQLLNFQLIGREIQSKVEVTNTEMRDYYRSHLDDYRNDPYLRLSRITF 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF--ASKIHDVSIGKAQYLLESDLHPQ 245 + A ++ +L + + LE + V G + E L Sbjct: 181 RLPPGNTPADIAAMRAKAADALQQLRRGKDFLEVLMQNAATSGVDGGDMGKITEGSLSES 240 Query: 246 F-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEA 302 F + + S + T +G + + ++ +K +S + K Sbjct: 241 FNRAISGLSVGQVSEIIETPEGFHLLRLDERNPGDTQTFETVKEQISRKLMEDKRAAALT 300 Query: 303 EYVKKLRSNAIIH 315 E+ + LR A I Sbjct: 301 EWTENLRKEADIE 313 >gi|71909270|ref|YP_286857.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dechloromonas aromatica RCB] gi|122070644|sp|Q479U4|SURA_DECAR RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|71848891|gb|AAZ48387.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dechloromonas aromatica RCB] Length = 438 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 43/324 (13%), Positives = 107/324 (33%), Gaps = 19/324 (5%) Query: 6 FTSLSDFIK-LLTTYFVLIIFCIVPIVSYKS-WAMSSRIRTTINGEVITDGDISKRIALL 63 +++ +I+ L+ L P+ + + RI + +VIT ++ R+ Sbjct: 1 MKTMNPYIRHLILLICCLGGMLAQPLSAAPQDPVEADRIVAVVGSDVITYFELRTRLTAA 60 Query: 64 KLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 Q LE+ ++ LI+E + Q ++G+ D ++ + A + Sbjct: 61 LKQLQKQGTPLPPQDVLERQMLERLIMERAQLQYGRETGMKIDDTQLDLAIGRIAAGNKM 120 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + F + L+K G+ F++ + + + + + + K E EI Sbjct: 121 TVPQFRAALEKDGVQYAQFREEIRNEMVTVRLREREVDSKLVISEGEIDNYLANQTATGS 180 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL---EKFASKIHDVSIG 232 E + +QK + E++ R N F+ + G Sbjct: 181 EEEYQLAHILLRAPE-SATPEQLQKLRQRGEQALKRARAGENFAQLTAAFSDAPDALQGG 239 Query: 233 KAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAY 287 + + L + + + ++ + G + + KR + + Sbjct: 240 DLGWRPLARLPALYAEAGSRLQSGEVSDLLRSSAGFHIVKLVSKRGGSAPASVQQTHARH 299 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSN 311 + +++ E ++ +R Sbjct: 300 ILIRSSEVLSEAEATRKLEAVRER 323 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 14/140 (10%), Positives = 49/140 (35%), Gaps = 2/140 (1%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 I +++ ++ ++++ E + ++ G+ +L Sbjct: 294 QTHARHILIRSSEVLSEAEATRKLEAVRERIANGVDFAEQARLYSQDGSAAKGGELGWLN 353 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQNTPTK 296 D P+F+ + N + + G+ I + ++R+ + + K Sbjct: 354 PGDTVPEFERAMDALKINEVSQVVQSPFGMHLIQVLERRERDVSAERQRAVARQALRERK 413 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 +++ +++++LR + Sbjct: 414 LDEAYQDWLRQLRDRTYVEN 433 >gi|291612516|ref|YP_003522673.1| SurA domain protein [Sideroxydans lithotrophicus ES-1] gi|291582628|gb|ADE10286.1| SurA domain protein [Sideroxydans lithotrophicus ES-1] Length = 433 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 111/317 (35%), Gaps = 17/317 (5%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71 K+ + ++ S K RI +N +VIT ++ R+A + + Sbjct: 5 KIFALFLIVFATVASAAESQKQATSLDRIDVIVNDDVITHRELENRVASVTKMLQRQKTA 64 Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA-EDFSSFL 124 LE+ ++ +I E L Q ++SG+ D ++ ++ A+ F + L Sbjct: 65 LPEKSILERQVLERMITEMLLAQYAKESGLRIDDGQLDKTILRIAQQNKFPDVAAFRAKL 124 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + G N F++ + + I + + + K E +I + + ++ Sbjct: 125 TRDGTDYNEFREEIRNEIIAVRLREREVDSKLVISENDIDNYLNNQAHQEGKGEELQLSH 184 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK---FASKIHDVSIGKAQYLLESD 241 + + +Q AE++ +L + ++ + G+ + Sbjct: 185 ILVVVPEQATADKIQSYRDRAEQALAKLRAGAPFAQVAAGYSDAQDALKGGELGWRPADR 244 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTK 296 L P F + L K + ++ + G I + D+R + ++ + + Sbjct: 245 LPPLFAEALQKMKPGDLSDVLRSPSGFHIIKLLDRRSNDAPVVITQTHARHILIKTSELV 304 Query: 297 IEKHEAEYVKKLRSNAI 313 + +++++ Sbjct: 305 TDSEAKSRLQEIKQRID 321 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 33/291 (11%), Positives = 90/291 (30%), Gaps = 15/291 (5%) Query: 40 SRIRTT------INGE-VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEK 92 + I ++ + VI++ DI + Q+ GE +++ L+V + + Sbjct: 140 NEIIAVRLREREVDSKLVISENDIDNYLNNQAHQEGKGEELQLS-HILVVVPEQATADKI 198 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 + A ++A + +G + K Sbjct: 199 QSYRDRAEQALAKLRAGAPFAQVAAGYSDAQDALKGGELGWRPADRLPPLFAEALQKMKP 258 Query: 153 ML-----KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + I ++ + V I ++L + R+++ ++ Sbjct: 259 GDLSDVLRSPSGFHIIKLLDRRSNDAPVVITQTHARHILIKTSELVTDSEAKSRLQEIKQ 318 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKG 266 + + ++ G +L + P+F++ + + T G Sbjct: 319 RIDKGASFAEQARLYSEDGSAPQGGDLGWLSPGETVPEFESAMNALKVGQVSGLVQTGFG 378 Query: 267 VEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + ++R+ + K K ++ +++++LR A + Y Sbjct: 379 WHLIQVLERRNTDVSVEQKRQRARNAIRTVKSDEAFQDWLRQLRDRAFVEY 429 >gi|39936127|ref|NP_948403.1| hypothetical protein RPA3064 [Rhodopseudomonas palustris CGA009] gi|192291845|ref|YP_001992450.1| SurA domain [Rhodopseudomonas palustris TIE-1] gi|39649981|emb|CAE28505.1| conserved unknown protein [Rhodopseudomonas palustris CGA009] gi|192285594|gb|ACF01975.1| SurA domain [Rhodopseudomonas palustris TIE-1] Length = 308 Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 58/285 (20%), Positives = 118/285 (41%), Gaps = 2/285 (0%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEK 92 + + + +NGE IT+ DI +R L ++ + + +++LI E +K +E +K Sbjct: 24 GTTQGQAQSVVVMVNGEPITNFDIDQRSKLNRMS-HKADSRQQVLEDLIDEKVKIKEAKK 82 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 G+ + ++ F A +S ++ L QGI + K + + +W +V+ F Sbjct: 83 YGVNPSDSDIDSSFSTMASRMRMSTAQMTNMLAAQGIRPDTLKSRIRAEMVWASLVRGRF 142 Query: 153 MLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 E E+ A K V + + + ++ + R K+AE+ R R Sbjct: 143 KDSLQVSEREVQAQLKGGDDTKAVESFEYQLRPVVMIVSRGSVSESLDARRKEAEQLRGR 202 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIA 271 + F + + G + L K + T P VT++G+E +A Sbjct: 203 ISSCAEADRVFKAMPNAAIRGIVIKTSADLPPALREILDKTPVGHLTPPEVTKQGIEMVA 262 Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +C+++ + K + + K + EY++++R A+I Y Sbjct: 263 LCERKQSTADTPRKREIREKLFGEKFQAKSKEYLQEVRKAAMIEY 307 >gi|225076364|ref|ZP_03719563.1| hypothetical protein NEIFLAOT_01408 [Neisseria flavescens NRL30031/H210] gi|224952307|gb|EEG33516.1| hypothetical protein NEIFLAOT_01408 [Neisseria flavescens NRL30031/H210] Length = 329 Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 36/284 (12%), Positives = 86/284 (30%), Gaps = 17/284 (5%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIEK 92 S I ++ EVIT +++ +A + Q EL + + ++I ++L Q ++ Sbjct: 52 SDGIAAVVDNEVITHRQVAQAVAQARQTMPKGTQMDANELRQQVLAQMINQSLILQAGKR 111 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I + + + SA D + + Q+I + Sbjct: 112 RNIQATDSEIEAVIAHNPNIKNPSAAVRQDIADS------IIVEKVRQQAIMQ---NSRV 162 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 +E + I + + I+ Sbjct: 163 SDSEVARYIEQAKQQGVTLPEADPVRQYHAQHILIKADNDNAAVGAESTIRKIYTQARSG 222 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 +++ + G + + + F+ + K + P TQ G I Sbjct: 223 ADFGGLARQYSQDSSAGNGGDLGWFADGMMVAPFEEAVHKLKPGQISAPVRTQFGWHIIK 282 Query: 272 ICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + D R+ E + + + K ++ +++L S++ + Sbjct: 283 LNDVREAGTPEERQQNAVRQYLSQQKAQQATTNLLRELHSSSYV 326 >gi|153834210|ref|ZP_01986877.1| chaperone SurA [Vibrio harveyi HY01] gi|148869398|gb|EDL68404.1| chaperone SurA [Vibrio harveyi HY01] Length = 427 Score = 134 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 108/310 (34%), Gaps = 12/310 (3%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----- 70 + + L+ ++ + ++ +N VI DI + L+ Sbjct: 1 MKIWKSLLFTTLLSCGVTAAPVELDKVAVIVNDGVILQSDIDTAMKTLQANARQSGKSLP 60 Query: 71 ---ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L+ V++LI++TL+ QE E+ G+ D N +N + ARN S E ++ + + Sbjct: 61 SASVLKDQVVEKLIIDTLQGQEAERIGVRIDDNRLNQAIAEIARNNNQSVEQLAASVQAE 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 G+ + F++ + + + + L E+ + ++ T + + Sbjct: 121 GLSYSEFREQIRKEIAASEARNALVRRRINILPAEVDSLADQLAKETNATVQYKIGHIQL 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + +++ V+ + ++ + G ++ + ++ F Sbjct: 181 RFSDDKDKSEVEAEANALVQKLKDGADFSEMAYTYSKGPKALQGGDWGWMRKEEMPTIFA 240 Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAE 303 + +++ + P+ + G + I D + + ++ + T + + Sbjct: 241 DQIKMQNKGSIIGPFRSGIGFHILKIEDVKGLETVAVTEVNARHILIKPTVILSDDGAKK 300 Query: 304 YVKKLRSNAI 313 + + Sbjct: 301 ELNEFIRRIK 310 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 50/140 (35%), Gaps = 3/140 (2%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238 + P L + G ++ + + +++ G+ Y Sbjct: 281 NARHILIKPTVILSDDGAKKELNEFIRRIKAGEATFGQLATQYSQDPGSAAQNGELGYQT 340 Query: 239 ESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTK 296 P+F++ ++ + + P+ T G + + D+R + + A+K K Sbjct: 341 PDLYVPEFKHQVETLPVGSISAPFKTVHGWHIVEVLDRRQVDRTDSAMKNKAYRILFNRK 400 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 + ++++LR++A + Sbjct: 401 FNEEAGAWMQELRASAFVEI 420 >gi|330505263|ref|YP_004382132.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas mendocina NK-01] gi|328919549|gb|AEB60380.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas mendocina NK-01] Length = 432 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 36/287 (12%), Positives = 96/287 (33%), Gaps = 15/287 (5%) Query: 40 SRIRTTINGEVITDGDISKRIALLK--------LQKINGELEKIAVQELIVETLKKQEIE 91 R+ ++ +V+ + R+ ++ L + ++ LI+E ++ Q + Sbjct: 33 DRVVAIVDNDVVMQSQLDARLREVQQTIDKRGGALPPEHVLSQQVLERLIIENIQLQIGD 92 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 +SGI +N A+ G+S E F L + G+ + + + I V + Sbjct: 93 RSGIRITDEELNQAMGTIAQRNGMSLEQFRDALARDGLSYADARDQVRREMIISRVRQRR 152 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIR---TVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + E+ R ++ ++ ++ + Sbjct: 153 VAERIQVTDQEVQNFLASDLGKMQLSEEFRLANILIPVSEGASSSEIQAADRQAQELYQQ 212 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 + ++ + + G+ + L P F +++ + + T P T G Sbjct: 213 LQQGADFGQLAVSRSASENALEGGEMGWRKAGQLPPPFDSMISQLNPGEATEPVRTPGGF 272 Query: 268 EYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + +KR + ++ + + + E+ V++L Sbjct: 273 IILKLIEKRGGDTQVRDEVHVRHILIKPSEIRSEEETRRLVERLYQR 319 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 12/138 (8%), Positives = 52/138 (37%), Gaps = 3/138 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 I ++++++ ++ ++ + + + F+ ++ G ++ Sbjct: 292 HVRHILIKPSEIRSEEETRRLVERLYQRIVDGEDFAELAKSFSEDPGSALNGGDLNWIDP 351 Query: 240 SDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKI 297 + L P+F+ ++ + + P+ + G + + +R + + K Sbjct: 352 NALVPEFREVMNNTASGELSKPFKSPYGWHVLQVMGRRATDSSAQFREQQAANLLRNRKY 411 Query: 298 EKHEAEYVKKLRSNAIIH 315 ++ +++++R A + Sbjct: 412 DEELQAWLRQIRDEAYVE 429 >gi|39997524|ref|NP_953475.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Geobacter sulfurreducens PCA] gi|39984415|gb|AAR35802.1| PPIC-type PPIASE domain protein [Geobacter sulfurreducens PCA] Length = 351 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 91/289 (31%), Gaps = 16/289 (5%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKI---------NGELEKIAVQELIVETLKKQEIEK 92 + +NG IT ++ + +L Q ++E+ AV +LI + L Q K Sbjct: 61 VVVKVNGVAITRAEVDRAKKVLMSQNRMTQPVTPDIAQKVEEAAVSQLIAKELLYQAGRK 120 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I + Q E + + + + + + ++++ D Sbjct: 121 QEIKDLDKQIQERVSQSKARFPSQEEYLKTL-KSMDMTEKDVETFAREDLVINNLIEKDV 179 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR- 211 + K + E + R+ ++ I + +K + AE + Sbjct: 180 VAKTTVSDEEAKKFYNDNIDKFKRDETVKASHILIKVEPNASADDKKKAKEKAEAILKQV 239 Query: 212 --LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVE 268 +K + G + + + P F+ ++ TQ G Sbjct: 240 KGGADFAEVAKKESGCPSAPQGGDLGFFGKGQMVPPFEKAAFAMKPGEVSDVVETQFGYH 299 Query: 269 YIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + DKR K + K+++ EYV+ L+ A I Sbjct: 300 IIKLTDKRPAETVKFEETKDRIVQFLKQQKVQEGINEYVENLKKAAKIE 348 >gi|229512625|ref|ZP_04402094.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae TMA 21] gi|229350302|gb|EEO15253.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae TMA 21] Length = 431 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 108/313 (34%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +KL + ++ + ++ + +N VI D+ + +K + Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LI++TL++QE ++ G+ D N +N + A+N + E + + Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ F++ + + D + L E+ + + T + Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLTQETDATVQYKISH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + Q++ + ++ + G ++ + ++ Sbjct: 181 IQLRVDDGQDKSAAETLANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ + P+ + G + I D + + ++ + T ++ Sbjct: 241 IFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEG 300 Query: 301 EAEYVKKLRSNAI 313 + + + Sbjct: 301 AQKQLNEFVQRIK 313 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 82/269 (30%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + KI+ +L V+ + + ++ N + Sbjct: 154 ILPAEVDTLAELLTQETDATVQYKISHIQLRVDDGQDKSAAETLANKLVNDLRNGADFAQ 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I Sbjct: 214 MAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKI-HD 228 TV + I + + QK++ + + ++++ Sbjct: 274 GLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSA 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R++ + ALK Sbjct: 334 AQKGELGYQTPDLYVPEFKHQIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKN 393 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + + ++++LR++A + Sbjct: 394 KAYRILFNRKFNEEASAWLQELRASAFVE 422 >gi|241759093|ref|ZP_04757204.1| peptidyl-prolyl cis-trans isomerase [Neisseria flavescens SK114] gi|241320695|gb|EER56948.1| peptidyl-prolyl cis-trans isomerase [Neisseria flavescens SK114] Length = 329 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 36/284 (12%), Positives = 86/284 (30%), Gaps = 17/284 (5%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIEK 92 S I ++ EVIT +++ +A + Q EL + + ++I ++L Q ++ Sbjct: 52 SDGIAAVVDNEVITHRQVAQAVAQARQTMPKGTQMDANELRQQVLAQMINQSLILQAGKR 111 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I + + + SA D + + Q+I + Sbjct: 112 RNIQATDSEIEAVIAHNPNIKNPSAAVRQDIADS------IIVEKVRQQAIMQ---NSRV 162 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 +E + I + + I+ Sbjct: 163 SDSEVARYIEQAKQQGVTLPEADPVRQYHAQHILIKADNDNAAVGAESTIRKIYSQARSG 222 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 +++ + G + + + F+ + K + P TQ G I Sbjct: 223 ADFGGLARQYSQDSSAGNGGDLGWFADGMMVAPFEEAVHKLKPGQISAPVRTQFGWHIIK 282 Query: 272 ICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + D R+ E + + + K ++ +++L S++ + Sbjct: 283 LNDVREAGTPEERQQNAVRQYLSQQKAQQATTNLLRELHSSSYV 326 >gi|118579840|ref|YP_901090.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelobacter propionicus DSM 2379] gi|118502550|gb|ABK99032.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelobacter propionicus DSM 2379] Length = 352 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 92/298 (30%), Gaps = 15/298 (5%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL--------EKIAVQELIVETL 85 S + +NG+ + ++ + L + N ++ +K+A+ +L L Sbjct: 54 ASAQQQKDVVARVNGKPVYARELERVKKALLAGRPNQQIPSEHQKEFDKMALNQLTSAEL 113 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 Q EK V Q + E + G+ ++ ++Y ++ Sbjct: 114 LYQAGEKLDTKDIDKQVEAKMSQGKARFATTEEFQKAI-AGLGMNESDLREYTRRDAVIA 172 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + V+ F K + E + ++ + +R I + + +K + A Sbjct: 173 NFVQQTFASKVTVSDEESRKFYDENQDKFKQSESVRASHILIGVDPKADPEIRKKAREKA 232 Query: 206 EESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPY 261 E+ R + ++ G + + P F+ Q ++ Sbjct: 233 EKLRKELAGGADFATLARENSTCPSSQQGGDLGFFPRGQMVPPFEQAAFSLKQGEVSDVV 292 Query: 262 VTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 TQ G I + + KA + K+ Y+ R + I Y Sbjct: 293 ETQFGYHIIKQMGHKNAETVSYADAKARIVDYLKNQKVNSAITAYLDDARKTSKIETY 350 >gi|91227110|ref|ZP_01261594.1| survival protein SurA [Vibrio alginolyticus 12G01] gi|269964662|ref|ZP_06178900.1| survival protein SurA [Vibrio alginolyticus 40B] gi|91188762|gb|EAS75049.1| survival protein SurA [Vibrio alginolyticus 12G01] gi|269830561|gb|EEZ84782.1| survival protein SurA [Vibrio alginolyticus 40B] Length = 427 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 36/310 (11%), Positives = 112/310 (36%), Gaps = 12/310 (3%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71 + + ++ ++ + + ++ +N V+ DI + L+ Sbjct: 1 MKIWKSILFTTLLSCGAVAAPVEIDKVAVIVNDGVVLQSDIETAMKTLQANARQSGKSLP 60 Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L++ V++LI++TL+ QE ++ G+ D N +N + ARN S E ++ ++ + Sbjct: 61 STSVLKEQVVEKLIIDTLQGQEADRIGVRIDDNRLNQAIAEIARNNEQSVEQLAASVESE 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 G+ F++ + + + + L E+ + +++ T + + Sbjct: 121 GLSYPEFREQIRKEIAASEARNALVRRRINILPAEVDSLAEQLSQETNATVQYKIGHIQL 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + + + V+ K + ++ + G ++ + ++ F Sbjct: 181 RFSDDKEKSAVEAEAKALAKKLNEGADFTEMAYTYSKGPKALQGGDWGWMRKEEMPTIFA 240 Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAE 303 + +++ + P+ + G + I D + + ++ + T ++ + Sbjct: 241 DQIKMQNKGSIIGPFRSGVGFHILKIEDVKGLETVAVTEVNARHILIKPTVILSDEGAKK 300 Query: 304 YVKKLRSNAI 313 + + Sbjct: 301 QLNEFVRRIK 310 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 30/270 (11%), Positives = 79/270 (29%), Gaps = 4/270 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ L + KI +L K++ ++ + +N Sbjct: 151 ILPAEVDSLAEQLSQETNATVQYKIGHIQLRFSDDKEKSAVEAEAKALAKKLNEGADFTE 210 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I + Sbjct: 211 MAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIEDVK 270 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKI-HD 228 TV + I + + +K++ + + +++ Sbjct: 271 GLETVAVTEVNARHILIKPTVILSDEGAKKQLNEFVRRIKAGEATFAQLATQYSQDPGSA 330 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + + P+ T G + + D+R + + A+K Sbjct: 331 AQDGELGYQTPDLYVPEFKHQVETLPVGSISEPFKTVHGWHIVEVLDRRQVDRTDSAMKN 390 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + ++++LR++A + Sbjct: 391 KAYRILFNRKFNEEAGAWMQELRASAFVEI 420 >gi|298506467|gb|ADI85190.1| peptidylprolyl cis-trans isomerase, PpiC-type [Geobacter sulfurreducens KN400] Length = 351 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 91/289 (31%), Gaps = 16/289 (5%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKI---------NGELEKIAVQELIVETLKKQEIEK 92 + +NG IT ++ + +L Q ++E+ AV +LI + L Q K Sbjct: 61 VVVKVNGVAITRAEVDRAKKVLMSQNRMTQPMTPDIAQKVEEAAVSQLIAKELLYQAGRK 120 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I V Q E + + + + + + ++++ + Sbjct: 121 QEIKDLDKQVQERVSQSKARFPSQEEYLKTL-KSMDMTEKDVETFAREDLVINNLIEKEV 179 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR- 211 + K + + + R+ ++ I + +K + AE + Sbjct: 180 VAKTTVSDEDAKKFYNDNIDKFKRDETVKASHILIKVEPNASADDKKKAKEKAEAILKQV 239 Query: 212 --LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVE 268 +K + G + + + P F+ ++ TQ G Sbjct: 240 KGGADFAEVAKKESGCPSAPQGGDLGFFGKGQMVPPFEKAAFAMKPGEVSDVVETQFGYH 299 Query: 269 YIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + DKR K + K+++ EYV+ L+ A I Sbjct: 300 IIKLTDKRPAETVKFEETKDRIVQFLKQQKVQEGINEYVENLKKAAKIE 348 >gi|153803547|ref|ZP_01958133.1| survival protein SurA [Vibrio cholerae MZO-3] gi|297580585|ref|ZP_06942511.1| survival protein SurA [Vibrio cholerae RC385] gi|124120914|gb|EAY39657.1| survival protein SurA [Vibrio cholerae MZO-3] gi|297535001|gb|EFH73836.1| survival protein SurA [Vibrio cholerae RC385] Length = 431 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 108/313 (34%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +KL + ++ + ++ + +N VI D+ + +K + Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LI++TL++QE ++ G+ D N +N + A+N + E + + Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ F++ + + D + L E+ + + T + Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + Q++ + ++ + G ++ + ++ Sbjct: 181 IQLRVDDGQDKSAAETLANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ + P+ + G + I D + + ++ + T ++ Sbjct: 241 IFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEG 300 Query: 301 EAEYVKKLRSNAI 313 + + + Sbjct: 301 AQKQLNEFVQRIK 313 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 82/269 (30%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + KI+ +L V+ + + ++ N + Sbjct: 154 ILPAEVDTLAELLAQETDATVQYKISHIQLRVDDGQDKSAAETLANKLVNDLRNGADFAQ 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I Sbjct: 214 MAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKI-HD 228 TV + I + + QK++ + + ++++ Sbjct: 274 GLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSA 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R++ + ALK Sbjct: 334 AQKGELGYQTPDLYVPEFKHQIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKN 393 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + + ++++LR++A + Sbjct: 394 KAYRILFNRKFNEEASAWLQELRASAFVE 422 >gi|148255225|ref|YP_001239810.1| hypothetical protein BBta_3828 [Bradyrhizobium sp. BTAi1] gi|146407398|gb|ABQ35904.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 312 Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 118/311 (37%), Gaps = 3/311 (0%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 ++ + ++ + A + I +NG+ ITD DI +R+ L L Sbjct: 1 MTIAFSSRLRALAICSLAVLASGAGLIPAQAQSIVVMVNGDPITDYDIEQRMKLNFLSTR 60 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + + + ELI + +K +E +K G+ ++ V+ F L+AE + L+ QG Sbjct: 61 KQQSRQEVINELIDDKVKIKEGKKFGVEPTASDVDQSFAGMGSRMRLNAEQLTKSLESQG 120 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLK--YGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + K + + +W +V+ + + + ++ + + + Sbjct: 121 VRPETLKARIKAEIVWTSLVRGRYKERLLVSDKDVAAAVAAAGGDSDQQGQAFEYKMQPI 180 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + + V + E+ + C + I + +D+ P Sbjct: 181 VLIVSNSSNQAVMEARHKEAEALRARVQTCADANNVFKTTANAVIKEIVVKTSADIPPNL 240 Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305 + LL + + T P T++G++ +A+C + + K + + K E Y+ Sbjct: 241 RKLLDDTPIGHLTPPEATKQGIQMVALCARTPTTVDTPKKRQIREEMYTKKYEATSKAYL 300 Query: 306 KKLRSNAIIHY 316 +++R A+I Y Sbjct: 301 QEVRKAAMIEY 311 >gi|323495831|ref|ZP_08100899.1| putative parvulin-like peptidyl-prolyl isomerase [Vibrio sinaloensis DSM 21326] gi|323319047|gb|EGA71990.1| putative parvulin-like peptidyl-prolyl isomerase [Vibrio sinaloensis DSM 21326] Length = 431 Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 111/313 (35%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69 +K + ++ ++ +I +NG VI + DI I LK Sbjct: 1 MKFWKQSLLAVLAASQFGLASAQPVALDKINVIVNGGVILESDIDTSIKTLKANAKKSGQ 60 Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + ++LI++TL++QE E+ GI D N +N + A+N + E S + Sbjct: 61 GLPTADVLRQQVTEKLIIDTLQQQEAERIGIRIDDNRLNEAIEEIAKNNNQTIEQLSDSI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 +G+ + F++ + + + + L E+ + T + Sbjct: 121 AAEGLEYSEFREQVRKEIAATEARNALVRRRINILPAEVDNLANILAQETNATVQYKIGH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + N + ++++ K+ ++ + G ++ + ++ Sbjct: 181 IQLRVNDGDDASAIEQQAKEIVAKLNNGSDFATMAYTYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + + +++ + P+ + G + I D + + ++ + T + Sbjct: 241 IFADQVGVQNKGSIIGPFRSGVGFHILKIEDVKGLETVAVTEVNARHILIRPTVILSDDG 300 Query: 301 EAEYVKKLRSNAI 313 + + ++ + Sbjct: 301 VQKELNEIIARIQ 313 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 31/269 (11%), Positives = 75/269 (27%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ +L + KI +L V + +N Sbjct: 154 ILPAEVDNLANILAQETNATVQYKIGHIQLRVNDGDDASAIEQQAKEIVAKLNNGSDFAT 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + + + + I + Sbjct: 214 MAYTYSKGPKALQGGDWGWMRKEEMPTIFADQVGVQNKGSIIGPFRSGVGFHILKIEDVK 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKI-HD 228 TV + I + + VQK + + +++ Sbjct: 274 GLETVAVTEVNARHILIRPTVILSDDGVQKELNEIIARIQSGEATFGELARQYSQDPGSA 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ + + + P+ T G + + D+R + + A+K Sbjct: 334 AQNGELGYQTSDLYVPEFKHQVDTLPEGKISQPFKTVHGWHIVEVLDRRQVDRTDSAMKN 393 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + + ++++LR++A + Sbjct: 394 KAYRILFNRKFNEEASAWLQELRASAFVE 422 >gi|197116616|ref|YP_002137043.1| PpiC-type peptidylprolyl cis-trans isomerase [Geobacter bemidjiensis Bem] gi|197085976|gb|ACH37247.1| peptidylprolyl cis-trans isomerase, PpiC-type, SurA family [Geobacter bemidjiensis Bem] Length = 317 Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 43/295 (14%), Positives = 90/295 (30%), Gaps = 13/295 (4%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------GELEKIAVQELIVETLKK 87 + S I +N E+IT ++ K ++ L A+ L+ L + Sbjct: 21 STAKQVSGIAAIVNDEIITTQELDKEYLQIQKDADKVPGSDKSGLRGAALNRLVERKLIE 80 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 Q+I + I V + L+ E+ L QG+ ++ L Q + Sbjct: 81 QKIRELNINVSDEEVRLAIEDVKKQNNLTQENLEQALVTQGLTLAQYRTQLKEQMERLRL 140 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ---NQGFVQKRIKD 204 + + K E E+ Q + +K + R + Sbjct: 141 MSQEVRSKVQVGEREMREYYQANIAAYGGSEVYSARHIFFKVDKKGGAGELSKAETRANE 200 Query: 205 AEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYV 262 +K++ G ++D+ + ++ Sbjct: 201 VLAKARAGEDFAALAKKYSDDPAAAKDGGDLGTFKKADMLPEIGDTVSAMKPGEVSSIVR 260 Query: 263 TQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + G+ I + K+ +K + K ++ A++VK+LR+ A I Sbjct: 261 SPAGLHIIKLEGKKQDAGRPFEQVKDSIEDTLYKKKSDERFAQWVKELRAGAAIE 315 >gi|312797257|ref|YP_004030179.1| peptidyl-prolyl cis-trans isomerase [Burkholderia rhizoxinica HKI 454] gi|312169032|emb|CBW76035.1| Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) [Burkholderia rhizoxinica HKI 454] Length = 512 Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 110/309 (35%), Gaps = 24/309 (7%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQEL 80 ++S+++ RI +N +VIT ++ R+ L+ + +L+ + ++ Sbjct: 92 ALLSHQAGQEVDRIVAVVNNDVITRRELDLRMGLITRRLQQQGAPLPSPDQLQLQVLNQM 151 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 ++E ++ Q ++ GI D T+ + + A+ +S + + + L+ +G+ + F Sbjct: 152 VLERIQLQRAKEDGIVVDDATLQHTLARLAQANNMSLDMYRARLEAEGVPWSVFSADARN 211 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPAN----KQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + + + + + + E+ + M+ + ++ + + Sbjct: 212 ELLLSKLREKEVDSRITVSDAEVANYIASQRGPMQRVQQDLRFEHILIKAALNAPQTEIE 271 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 +++ + + L + + G + S L + + Sbjct: 272 AARQKASELLKRALASENFARLAKDNSQAPDASKGGDLGFRSTSALPEAMTQAASQLRPG 331 Query: 257 TTNP--YVTQKGVEYIAICDKRDLGGE--------IALKAYLSAQNTPTKIEKHEAEYVK 306 NP T +G E + + D+R G ++ + + E + + Sbjct: 332 QVNPEVLRTPEGFEIVRLVDRRVSSGMGSEAPRLVQTHARHILIRIGEGQPEPAARQKLV 391 Query: 307 KLRSNAIIH 315 +LR I Sbjct: 392 ELREQ--IE 398 Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 31/284 (10%), Positives = 87/284 (30%), Gaps = 22/284 (7%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQ---ELIV------ETLKKQEIEKSGITFDSNT 101 IT D ++ + Q+ + + ++ LI +T + +K+ Sbjct: 227 ITVSD-AEVANYIASQRGPMQRVQQDLRFEHILIKAALNAPQTEIEAARQKASELLKRAL 285 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 + F + A++ + + + + + Sbjct: 286 ASENFARLAKDNSQAPDASKGGDLGFRSTSALPEAMTQ---AASQLRPGQVNPEVLRTPE 342 Query: 162 EIPANKQKMKNITVRE-------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + + ++ I + Q + ++++ + E Sbjct: 343 GFEIVRLVDRRVSSGMGSEAPRLVQTHARHILIRIGEGQPEPAARQKLVELREQIEAGGD 402 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC 273 N ++ G ++ + P+F+ + + P T+ G I + Sbjct: 403 FANFAHTYSQDGSASQGGDLGWISPGETVPEFERAMNNLKDGEISQPIRTEYGYHLIQVM 462 Query: 274 DKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R+ G +A + + K E+ A+++++LR +A + Y Sbjct: 463 GRREAQGSVAQQQEIARQAIGQRKAEQAYADWLRQLRDSAYVQY 506 >gi|86357089|ref|YP_468981.1| peptidyl-prolyl cis-trans isomerase protein [Rhizobium etli CFN 42] gi|86281191|gb|ABC90254.1| probable peptidyl-prolyl cis-trans isomerase protein [Rhizobium etli CFN 42] Length = 314 Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 81/311 (26%), Positives = 151/311 (48%), Gaps = 11/311 (3%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K +T + ++ ++ + A +S ++ +NG IT GD++KR A L+LQ + Sbjct: 6 KAITAFLAGAAIALLTGLAGPALA-ASGVQAVVNGTAITSGDVAKRQAFLRLQHTKADA- 63 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 K A ++LI ETLK+QE+ + ++ V+ F + + LS E S LD+ G+G +H Sbjct: 64 KTATEQLIDETLKRQEVARVHMSVSQQDVDASFARFSAGNKLSVEQMSQILDRAGVGVDH 123 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 FK ++A+Q WP VV + ++ + + + + Sbjct: 124 FKGFIAVQMSWPRVVNARYGSTSRLSNYDLVSRMMQNNKQKPVTTEYMLQQIIFVIPEAK 183 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 KR +AE SR + P ++ + FA+ + DVS+ +L ++ P +++L++++ Sbjct: 184 RGAITGKRKGEAEASRSKFPGC-DQAKTFAATMRDVSVRDLGRMLAPEIPPDWKSLVEQA 242 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI--------EKHEAEYV 305 + NTT VT+KGVEY+AIC +R + + A + ++ ++ +Y+ Sbjct: 243 KGNTTGTRVTEKGVEYLAICSQRQVSDDQAAEMVFRQEDLDKSKAGKNGPPENENSKKYL 302 Query: 306 KKLRSNAIIHY 316 +LR A I Y Sbjct: 303 DELRKKAQIAY 313 >gi|15640472|ref|NP_230099.1| survival protein SurA [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121729954|ref|ZP_01682374.1| survival protein SurA [Vibrio cholerae V52] gi|147674503|ref|YP_001218713.1| survival protein SurA [Vibrio cholerae O395] gi|153823925|ref|ZP_01976592.1| survival protein SurA [Vibrio cholerae B33] gi|227080656|ref|YP_002809207.1| survival protein SurA [Vibrio cholerae M66-2] gi|229507084|ref|ZP_04396590.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae BX 330286] gi|229508761|ref|ZP_04398253.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae B33] gi|229519748|ref|ZP_04409191.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae RC9] gi|229606260|ref|YP_002876908.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae MJ-1236] gi|254850676|ref|ZP_05240026.1| chaperone surA precursor [Vibrio cholerae MO10] gi|255743828|ref|ZP_05417785.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholera CIRS 101] gi|262147181|ref|ZP_06027987.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae INDRE 91/1] gi|262167591|ref|ZP_06035295.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae RC27] gi|298501023|ref|ZP_07010824.1| survival protein SurA [Vibrio cholerae MAK 757] gi|81788531|sp|Q9KUS0|SURA_VIBCH RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|9654869|gb|AAF93618.1| survival protein SurA [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121628294|gb|EAX60804.1| survival protein SurA [Vibrio cholerae V52] gi|126518552|gb|EAZ75775.1| survival protein SurA [Vibrio cholerae B33] gi|146316386|gb|ABQ20925.1| survival protein SurA [Vibrio cholerae O395] gi|227008544|gb|ACP04756.1| survival protein SurA [Vibrio cholerae M66-2] gi|227012299|gb|ACP08509.1| survival protein SurA [Vibrio cholerae O395] gi|229344437|gb|EEO09412.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae RC9] gi|229354164|gb|EEO19095.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae B33] gi|229355829|gb|EEO20749.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae BX 330286] gi|229368915|gb|ACQ59338.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae MJ-1236] gi|254846381|gb|EET24795.1| chaperone surA precursor [Vibrio cholerae MO10] gi|255738577|gb|EET93965.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholera CIRS 101] gi|262023927|gb|EEY42624.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae RC27] gi|262031386|gb|EEY49994.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae INDRE 91/1] gi|297540271|gb|EFH76331.1| survival protein SurA [Vibrio cholerae MAK 757] Length = 431 Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 108/313 (34%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +KL + ++ + ++ + +N VI D+ + +K + Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LI++TL++QE ++ G+ D N +N + A+N + E + + Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ F++ + + D + L E+ + + T + Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + Q++ + ++ + G ++ + ++ Sbjct: 181 IQLRVDDGQDKSTAETLANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ + P+ + G + I D + + ++ + T ++ Sbjct: 241 IFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEG 300 Query: 301 EAEYVKKLRSNAI 313 + + + Sbjct: 301 AQKQLNEFVQRIK 313 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 82/269 (30%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + KI+ +L V+ + + ++ N + Sbjct: 154 ILPAEVDTLAELLAQETDATVQYKISHIQLRVDDGQDKSTAETLANKLVNDLRNGADFAQ 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I Sbjct: 214 MAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKI-HD 228 TV + I + + QK++ + + ++++ Sbjct: 274 GLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSA 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R++ + ALK Sbjct: 334 AQKGELGYQTPDLYVPEFKHQIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKN 393 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + + ++++LR++A + Sbjct: 394 KAYRILFNRKFNEEASAWLQELRASAFVE 422 >gi|254292211|ref|ZP_04962978.1| survival protein SurA [Vibrio cholerae AM-19226] gi|150421868|gb|EDN13848.1| survival protein SurA [Vibrio cholerae AM-19226] Length = 431 Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 108/313 (34%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +KL + ++ + ++ + +N VI D+ + +K + Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LI++TL++QE ++ G+ D N +N + A+N + E + + Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ F++ + + D + L E+ + + T + Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + Q++ + ++ + G ++ + ++ Sbjct: 181 IQLRVDDGQDKSAAETLANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ + P+ + G + I D + + ++ + T ++ Sbjct: 241 IFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEG 300 Query: 301 EAEYVKKLRSNAI 313 + + + Sbjct: 301 AQKQLNEFVQRIK 313 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 82/269 (30%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + KI+ +L V+ + + ++ N + Sbjct: 154 ILPAEVDTLAELLAQETDATVQYKISHIQLRVDDGQDKSAAETLANKLVNDLRNGADFAQ 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I Sbjct: 214 MAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKI-HD 228 TV + I + + QK++ + + ++++ Sbjct: 274 GLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSA 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R++ + ALK Sbjct: 334 AQKGELGYQTPDLYVPEFKHQIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKN 393 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + + ++++LR++A + Sbjct: 394 KAYRILFNRKFNEEASAWLQELRASAFVE 422 >gi|153827415|ref|ZP_01980082.1| survival protein SurA [Vibrio cholerae MZO-2] gi|149738658|gb|EDM53001.1| survival protein SurA [Vibrio cholerae MZO-2] Length = 431 Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 108/313 (34%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +KL + ++ + ++ + +N VI D+ + +K + Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LI++TL++QE ++ G+ D N +N + A+N + E + + Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ F++ + + D + L E+ + + T + Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + Q++ + ++ + G ++ + ++ Sbjct: 181 IQLRVDDGQDKNAAETLANKLVNDLKNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ + P+ + G + I D + + ++ + T ++ Sbjct: 241 IFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEG 300 Query: 301 EAEYVKKLRSNAI 313 + + + Sbjct: 301 AQKQLNEFVQRIK 313 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 82/269 (30%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + KI+ +L V+ + + ++ N + Sbjct: 154 ILPAEVDTLAELLAQETDATVQYKISHIQLRVDDGQDKNAAETLANKLVNDLKNGADFAQ 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I Sbjct: 214 MAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKI-HD 228 TV + I + + QK++ + + ++++ Sbjct: 274 GLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSA 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R++ + ALK Sbjct: 334 AQKGELGYQTPDLYVPEFKHQIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKN 393 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + + ++++LR++A + Sbjct: 394 KAYRILFNRKFNEEASAWLQELRASAFVE 422 >gi|153217229|ref|ZP_01950993.1| survival protein SurA [Vibrio cholerae 1587] gi|153830824|ref|ZP_01983491.1| survival protein SurA [Vibrio cholerae 623-39] gi|229519985|ref|ZP_04409414.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae TM 11079-80] gi|229525138|ref|ZP_04414543.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae bv. albensis VL426] gi|124113752|gb|EAY32572.1| survival protein SurA [Vibrio cholerae 1587] gi|148873683|gb|EDL71818.1| survival protein SurA [Vibrio cholerae 623-39] gi|229338719|gb|EEO03736.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae bv. albensis VL426] gi|229342934|gb|EEO07923.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae TM 11079-80] Length = 431 Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 108/313 (34%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +KL + ++ + ++ + +N VI D+ + +K + Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LI++TL++QE ++ G+ D N +N + A+N + E + + Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ F++ + + D + L E+ + + T + Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + Q++ + ++ + G ++ + ++ Sbjct: 181 IQLRVDDGQDKSAAETLANKLVNDLKNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ + P+ + G + I D + + ++ + T ++ Sbjct: 241 IFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEG 300 Query: 301 EAEYVKKLRSNAI 313 + + + Sbjct: 301 AQKQLNEFVQRIK 313 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 82/269 (30%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + KI+ +L V+ + + ++ N + Sbjct: 154 ILPAEVDTLAELLAQETDATVQYKISHIQLRVDDGQDKSAAETLANKLVNDLKNGADFAQ 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I Sbjct: 214 MAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKI-HD 228 TV + I + + QK++ + + ++++ Sbjct: 274 GLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSA 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R++ + ALK Sbjct: 334 AQKGELGYQTPDLYVPEFKHQIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKN 393 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + + ++++LR++A + Sbjct: 394 KAYRILFNRKFNEEASAWLQELRASAFVE 422 >gi|238918641|ref|YP_002932155.1| peptidyl-prolyl cis-trans isomerase SurA [Edwardsiella ictaluri 93-146] gi|238868209|gb|ACR67920.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 434 Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 112/311 (36%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ + ++ + + ++ ++ V+ + D+ + +KL L Sbjct: 7 LILGVALCANTAFAAPQVVDKVVAIVDNGVVLESDVDGMMKSVKLNAQQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ ++ Q ++ G+ + ++ A+ +S + S L G+ Sbjct: 67 RHQILERLIMDNVQLQMAKRMGLEISDSELDNAINGIAQQNHISMQQLRSRLAADGLDYK 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L E+ A +++ + E + IP + Sbjct: 127 TYRDQIRKEMLISEVRNNEVRSRVTILPQEVDALAKQIGSQNSGETAVNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAE---ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 Q V + K AE + + +++ + G+ + +L F + Sbjct: 187 PTQQQVSEAQKQAESLIQQLHQGASFAKLAAAYSADPQALKGGEMGWGRLQELPTLFAEA 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 L + + P + G + + D R + ++ + +P + Sbjct: 247 LQSAKKGDIVGPIRSGVGFHILRVNDLRGDQASVSVTEVHARHILLRPSPVMSDTQARAK 306 Query: 305 VKKLRSNAIIH 315 ++ L +A I Sbjct: 307 LEAL--SAQIK 315 Score = 89.0 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 35/285 (12%), Positives = 85/285 (29%), Gaps = 17/285 (5%) Query: 47 NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 N EV I ++ + Q ++ LI + + S + + Sbjct: 143 NNEVRSRVTILPQEVDALAKQIGSQNSGETAVNLS-HILIPLPENPTQQQVSEAQKQAES 201 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-------FML 154 + Q A L+A + +G + + Sbjct: 202 LIQQLHQGASFAKLAAAYSADPQALKGGEMGWGRLQELPTLFAEALQSAKKGDIVGPIRS 261 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 G + + + +++V E R +L P + + K + + + Sbjct: 262 GVGFHILRVNDLRGDQASVSVTEVHARHIL-LRPSPVMSDTQARAKLEALSAQIKSGQIT 320 Query: 215 DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAI 272 ++++ G + + S P F++ +K ++ + P + G I + Sbjct: 321 FEQAAKEYSQDPGSAQKGGDLGWAVPSMYDPAFRDALMKLNKGEISQPVHSNFGWHLIQL 380 Query: 273 CDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 D R + + A K K + ++++ R+ A + Sbjct: 381 LDTRQVDRTDEAQKERAYRMLFNRKFAEEAQTWLQEQRAAAYVKI 425 >gi|229530289|ref|ZP_04419677.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae 12129(1)] gi|229332062|gb|EEN97550.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae 12129(1)] Length = 431 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 108/313 (34%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +KL + ++ + ++ + +N VI D+ + +K + Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LI++TL++QE ++ G+ D N +N + A+N + E + + Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 K+G+ F++ + + D + L E+ + + T + Sbjct: 121 AKEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + Q++ + ++ + G ++ + ++ Sbjct: 181 IQLRVDDGQDKSAAETLANKLVNDLKNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ + P+ + G + I D + + ++ + T ++ Sbjct: 241 IFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEG 300 Query: 301 EAEYVKKLRSNAI 313 + + + Sbjct: 301 AQKQLNEFVQRIK 313 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 82/269 (30%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + KI+ +L V+ + + ++ N + Sbjct: 154 ILPAEVDTLAELLAQETDATVQYKISHIQLRVDDGQDKSAAETLANKLVNDLKNGADFAQ 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I Sbjct: 214 MAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKI-HD 228 TV + I + + QK++ + + ++++ Sbjct: 274 GLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSA 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R++ + ALK Sbjct: 334 AQKGELGYQTPDLYVPEFKHQIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKN 393 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + + ++++LR++A + Sbjct: 394 KAYRILFNRKFNEEASAWLQELRASAFVE 422 >gi|262403929|ref|ZP_06080486.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio sp. RC586] gi|262349891|gb|EEY99027.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio sp. RC586] Length = 431 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 108/313 (34%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +KL + ++ + ++ + +N VI D+ + +K + Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LI++TL++QE ++ G+ D N +N + A+N + E + + Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ F++ + + D + L E+ + + T + Sbjct: 121 AQEGLTYPEFREQIRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + Q++ + ++ + G ++ + ++ Sbjct: 181 IQLRVDDGQDKSAAETLANKLVNDLKNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ + P+ + G + I D + + ++ + T ++ Sbjct: 241 IFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEG 300 Query: 301 EAEYVKKLRSNAI 313 + + + Sbjct: 301 AQKQLNEFVQRIK 313 Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 82/269 (30%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + KI+ +L V+ + + ++ N + Sbjct: 154 ILPAEVDTLAELLAQETDATVQYKISHIQLRVDDGQDKSAAETLANKLVNDLKNGADFAQ 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I Sbjct: 214 MAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKI-HD 228 TV + I + + QK++ + + ++++ Sbjct: 274 GLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSA 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R++ + ALK Sbjct: 334 AQKGELGYQTPDLYVPEFKHQIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKN 393 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + + ++++LR++A + Sbjct: 394 KAYRILFNRKFNEEASAWLQELRASAFVE 422 >gi|240949661|ref|ZP_04753996.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus minor NM305] gi|240295919|gb|EER46595.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus minor NM305] Length = 317 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 58/316 (18%), Positives = 106/316 (33%), Gaps = 15/316 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + +L+ F +S +A R+ T++G +I + +++ L + Sbjct: 1 MKFTSAKSLLVAFVATLGLSQSLFAAEERVVATVDGNMIMESQVARA---LGKKANTEAN 57 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 K A++ +I E L ++ I++SG+ D V+ + A GL+ LD QGI N Sbjct: 58 RKAALESIIDEMLVQKAIQQSGVKVDYRRVDQAIEEIAARNGLTYGQLLDALDYQGISLN 117 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV---------REYLIRTV 183 ++Q +A Q + V E+ A Q + + Sbjct: 118 QYRQQIAQQMMMEAVRHQSIGKSIQVNPEEVRAQAQALMAKDKAAGKLKAVSGTEPRISH 177 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY-LLESD 241 + L + K + + + + G + L+ Sbjct: 178 ILIKTTPVLNDAQAKAKLNSIIADIKAGKTTFEEAAKANSVDYVSAADGGDLGFNFLDIY 237 Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKH 300 K Q T P+ +Q G + + D R A Q + E Sbjct: 238 DPAFANAAAKAKQGQITAPFKSQFGWHILKVTDSRQGDRTEDAYAQRAYEQLANQQAEAA 297 Query: 301 EAEYVKKLRSNAIIHY 316 ++VK LR A I Y Sbjct: 298 SKDWVKALRKTANIQY 313 >gi|254509382|ref|ZP_05121467.1| chaperone SurA [Vibrio parahaemolyticus 16] gi|219547690|gb|EED24730.1| chaperone SurA [Vibrio parahaemolyticus 16] Length = 431 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 110/313 (35%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69 +K + + ++Y +I +N VI + DI I LK Sbjct: 1 MKFWKKSLLALFAASQFTLAYAQPVALDKINVIVNSGVILESDIDTSIKTLKANARKNGQ 60 Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + ++LI++TL++QE E+ G+ D N +N + A+N + E S + Sbjct: 61 GLPEQEVLRQQVTEKLIIDTLQQQEAERIGVRIDDNRLNQAIEEIAKNNNQTIEQLSDSI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 +G+ + F++ + + + + L E+ + T + Sbjct: 121 AAEGLEYSEFREQVRKEIAATEARNALVRRRINILPAEVDNLANILAQETNATVQYKISH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + N + ++K+ KD ++ + G ++ + ++ Sbjct: 181 IQLRVNDGDDASALEKQAKDIVAKLKEGADFATMAYTYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + + +++ + P+ + G + I D + + ++ + T ++ Sbjct: 241 IFADNINLENKGSVIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIRPTVILSDEG 300 Query: 301 EAEYVKKLRSNAI 313 + + ++ Sbjct: 301 VQKELNEIIERIQ 313 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 32/270 (11%), Positives = 77/270 (28%), Gaps = 4/270 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ +L + KI+ +L V + + Sbjct: 154 ILPAEVDNLANILAQETNATVQYKISHIQLRVNDGDDASALEKQAKDIVAKLKEGADFAT 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + +I + + + I Sbjct: 214 MAYTYSKGPKALQGGDWGWMRKEEMPTIFADNINLENKGSVIGPFRSGVGFHILKIDDVK 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKI-HD 228 TV + I + + VQK + + E +++ Sbjct: 274 GLETVAVTEVNARHILIRPTVILSDEGVQKELNEIIERIQAGEATFGELARQYSQDPGSA 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ + + + P+ T G + + D+R + + A+K Sbjct: 334 AQNGELGYQTSDLYVPEFKHQVDTLPEGQISEPFKTVHGWHIVEVLDRRQVDRTDSAMKN 393 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + + ++++LR++A + Sbjct: 394 KAYRILFNRKFNEEASAWLQELRASAFVEI 423 >gi|220919569|ref|YP_002494873.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-1] gi|219957423|gb|ACL67807.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-1] Length = 338 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 38/293 (12%), Positives = 94/293 (32%), Gaps = 18/293 (6%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKI------------NGELEKIAVQELIVETLKK 87 R+ +NG+V+T ++ +R A L L + + A +++ + L Sbjct: 37 DRVAAIVNGDVVTLQELEQRAAALGLAAADALPAGPARDKARADALRRAFDQVVSDKLFA 96 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 ++ ++ I V+ + G + S L +G ++ + + + Sbjct: 97 EKAKELEIEVTEKQVDDAIEGVKKQNGFTDAQLESALASEGYSMTDYRARIRRELQNFSL 156 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD---NKLQNQGFVQKRIKD 204 ++ K E ++ Q E +R IP Q + + + Sbjct: 157 LQYKVAGKIKTSEEDLRNYYQSHPQEFDGEDEVRVRHIFIPFAEGGGAQAEAQARAEGRR 216 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 + + + G+ +L +H ++ + Sbjct: 217 VLQRLKTGEDFGAVAKAVSRGPSAEEGGELGWLKRGTIHRTLEDAAFALKTGEMSGLVEA 276 Query: 264 QKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 GV + + ++R + + + + E + +YV +LR +A+I Sbjct: 277 GPGVHILKVEERRRGGGKSFEQARDEIRQRLGEEQAENYRQQYVAELRRDALI 329 >gi|332531190|ref|ZP_08407103.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hylemonella gracilis ATCC 19624] gi|332039297|gb|EGI75710.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hylemonella gracilis ATCC 19624] Length = 447 Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 37/325 (11%), Positives = 98/325 (30%), Gaps = 25/325 (7%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSW----AMSSRIRTTINGEVITDGDISKRIALLKLQK-- 67 ++L T +L + + + I +N E IT+ ++ +A Q Sbjct: 9 RVLCTAMLLAVLGAAQAQGTPAPPPSVRSADYIVAVVNSEPITNAQVNAEVARALRQLAA 68 Query: 68 ------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 L + + +LI E + Q + G+ D +V+ AR L+ Sbjct: 69 QRRPAPEGQALRRQVLDQLINERAQLQLAREMGLKIDEPSVDQAEQNVARQNQLTVTQLR 128 Query: 122 SFLDKQGIGDNHF-KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--- 177 + +Q + L Q + + + + + + ++ + + Sbjct: 129 EQVQQQDGMTTQALRARLKEQLLLTRLREREVDARVKVSDADVEQYLSEQQQRNSNPASQ 188 Query: 178 -YLIRTVLFSIPDNKLQNQGFVQKRIKDAEE--SRLRLPKDCNKLEKFASKIHDVSIGKA 234 I +L ++P++ +R + +R + + + + G+ Sbjct: 189 LIHIAHILVAVPEDASATFQLESQRKAEQIARRAREKGADFAALARELSDAADRANGGQL 248 Query: 235 QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR-----DLGGEIALKAYL 288 F N ++ + + P + G + + ++R + ++ Sbjct: 249 GLRAGDRYPALFTNAVRTLAVGEISEPVRSGAGFHVLKLIERRQPAPAPQTVTQSRARHI 308 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAI 313 + E + + R Sbjct: 309 LLIPSAQLSEAQARDKLNDFRRRIQ 333 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 19/155 (12%), Positives = 49/155 (31%), Gaps = 3/155 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + TV + R +L + Q K + + Sbjct: 288 IERRQPAPAPQTVTQSRARHILLIPSAQLSEAQA-RDKLNDFRRRIQSGDTDFATLARQN 346 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G + P+F+N++ + + + P +++ GV I + ++R Sbjct: 347 SQDGSAAQGGDLGWASPGMFVPEFENVMNQLAPGQISEPLISRFGVHLIQLLERRQATLN 406 Query: 282 IALKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + K+ + +++ R+ A + Sbjct: 407 EREQRELVRNMLRERKMAEAYDNWIRDTRARAYVE 441 >gi|261855875|ref|YP_003263158.1| SurA domain protein [Halothiobacillus neapolitanus c2] gi|261836344|gb|ACX96111.1| SurA domain protein [Halothiobacillus neapolitanus c2] Length = 465 Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 118/341 (34%), Gaps = 30/341 (8%) Query: 1 MTSKVFTS--LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSS-----------RIRTTIN 47 MT+ +S L F +L + L +V + RI +N Sbjct: 1 MTTSPRSSFLLHIFARLTPAWLALAAGLSFGVVFSTPTIAADLTPAAGEQMFDRIVAVVN 60 Query: 48 GEVITDGDISKRIALLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDS 99 VIT ++ RI + Q +LE+ + +I E ++ Q ++ GIT D Sbjct: 61 QSVITQRQLNDRIQQVSSQINIQALSPSDFKQLEERVLDRMITEEVELQRAKQIGITVDE 120 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 ++ A+ G+S + + +QG N ++ + Q I ++ + + + Sbjct: 121 QRLDSALDGIAQRNGMSLDQLQQAVTRQGEDWNAYRDNIRKQIIIDELKRREVYERVDIT 180 Query: 160 EMEIPAN--KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + +I + + EY + +L S+P+N +Q K+ D + L+ +D Sbjct: 181 DRDIDEYLKQYMGADTDTTEYHLAQILISVPENATPSQVENAKKRADDVMAALKAGQDFA 240 Query: 218 KLEKF-ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 K+ + G + S + F + +K + + G + + + Sbjct: 241 KVSAERSDAPDATKGGDLGWRDMSRIPGLFTDTVKSLKTGEISGLIRSPNGFHILKLLGE 300 Query: 276 RD-----LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 R ++ Q + +KLR Sbjct: 301 RKRTAGNTQLTEYEAEHVLIQVNGKRDATAAKAQAEKLRQE 341 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 34/275 (12%), Positives = 93/275 (33%), Gaps = 13/275 (4%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 ITD DI + + + + + + ++++ + + ++ Sbjct: 179 ITDRDIDEYLKQY--MGADTDTTEYHLAQILISVPENATPSQVENAKKRADDVMAALKAG 236 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG--------NLEME 162 ++ + + S D GD ++ I ++ D VK+ + ++ Sbjct: 237 QDFAKVSAERSDAPDATKGGDLGWRDMSRIPGLFTDTVKSLKTGEISGLIRSPNGFHILK 296 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + +++ T + + K + K +E K+ Sbjct: 297 LLGERKRTAGNTQLTEYEAEHVLIQVNGKRDATAAKAQAEKLRQEIISGKATFAEIASKY 356 Query: 223 ASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG 280 + G ++ SD+ P+F +L+++ + + TQ G ++ + R++ Sbjct: 357 SDDKGSAQQGGLLGWVNPSDMVPEFATMLEQTPVGKISPVFQTQFGFHFLEVLKTREVQV 416 Query: 281 EIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +A + ++ Y+++LR+ A I Sbjct: 417 PTDKLRAQARQAIGQRRADEDLVNYIRRLRAEAYI 451 >gi|197124851|ref|YP_002136802.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. K] gi|196174700|gb|ACG75673.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. K] Length = 336 Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 39/293 (13%), Positives = 96/293 (32%), Gaps = 18/293 (6%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKI------------NGELEKIAVQELIVETLKK 87 R+ +NG+V+T ++ +R A L L + + A +++ + L Sbjct: 35 DRVAAIVNGDVVTLQELEQRAAALGLAAADALPAGPARDKARADALRRAFDQVVSDKLFA 94 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 ++ ++ I V+ + G + S L +G ++ + + + Sbjct: 95 EKAKELEIEVTEKQVDDAIEGVKKQNGFTDAQLESALASEGYSMTDYRARIRRELQNFSL 154 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 ++ K E ++ Q E +R IP + + + + Sbjct: 155 LQYKVAGKIKTSEEDLRNYYQSHPQEFDGEDEVRVRHIFIPFAEGGGAQAEAQARAEGQR 214 Query: 208 SRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 RL + + + G+ +L +H ++ + Sbjct: 215 VLQRLKTGEDFGAVAKAVSRGPSAEEGGELGWLKRGTIHRTLEDAAFALKTGEMSGLVEA 274 Query: 264 QKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 GV + + ++R + + + + E + +YV +LR +A+I Sbjct: 275 GPGVHILKVEERRRGGGKSFEQARDEIRQRLGEEQAENYRQQYVAELRRDALI 327 >gi|326794311|ref|YP_004312131.1| Chaperone surA [Marinomonas mediterranea MMB-1] gi|326545075|gb|ADZ90295.1| Chaperone surA [Marinomonas mediterranea MMB-1] Length = 419 Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 102/306 (33%), Gaps = 10/306 (3%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI----NG 70 + + +L I + + + + + ++ + + + DI+ R ++K + Sbjct: 2 MKKLFLLLSIVVTMNSPLFAAPKLLDGVVAIVDSQPLLESDINTRFQVIKDRIPGGVMTA 61 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + + + +LI ET++ ++ GI + + A+ L +QGI Sbjct: 62 GIRRQILNQLIEETVQINYGKRLGIRIPQENTDAAVLNVAQKFSTDLGGLKQLLSRQGID 121 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + ++Q + + + V + + E EI +N + + + Sbjct: 122 YSRYRQQIENEILINAVKQRVIKDRISITEQEISDFISASQNTQSSKNELHLRHIIVRAK 181 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250 K+I S N+ ++ + G + S L F + Sbjct: 182 NETEALAKIKQIASGIASENDF---INQAITYSDGQFALEGGDLGWRPVSQLPALFTKAI 238 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTKIEKHEAEYVKK 307 + P + G + + +KR ++ + ++ Q + E+ + + Sbjct: 239 NTQKGPLIGPLKSNAGYHLLWVIEKRSANVQLQAQTKTRHILLQPNEIRTEQQTVALINE 298 Query: 308 LRSNAI 313 L A+ Sbjct: 299 LYKRAM 304 Score = 89.3 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 30/267 (11%), Positives = 80/267 (29%), Gaps = 7/267 (2%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 IT+ +IS I+ Q ++ ++ +IV + E S + + Sbjct: 149 ITEQEISDFIS--ASQNTQSSKNELHLRHIIVRAKNETEALAKIKQIASGIASENDFINQ 206 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 T + D + N + +K Sbjct: 207 AITYSDGQFALEGGDLGWRPVSQLPALFTKAINTQK--GPLIGPLKSNAGYHLLWVIEKR 264 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + +T + N+++ + I + + + +++ + Sbjct: 265 SANVQLQAQTKTRHILLQPNEIRTEQQTVALINELYKRAMSGEDFAGLASEYSDDQGSTL 324 Query: 230 SIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AY 287 G ++ + P F+ ++ + P+ +Q G + + D+R ++K Sbjct: 325 QGGDLGWVKLGMMVPAFEKVMTATKTGAVSKPFRSQFGWHILKVEDRRKEDISESVKQQQ 384 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + + ++ +L+ +A I Sbjct: 385 AEKALVAQKQDFVLSNWLDELKESAFI 411 >gi|222085450|ref|YP_002543980.1| peptidyl-prolyl cis-trans isomerase protein [Agrobacterium radiobacter K84] gi|221722898|gb|ACM26054.1| peptidyl-prolyl cis-trans isomerase protein [Agrobacterium radiobacter K84] Length = 316 Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 88/308 (28%), Positives = 151/308 (49%), Gaps = 4/308 (1%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 ++ + +I + S +S ++ +N VIT GDI+KRI LKLQ G+L Sbjct: 8 MRAVLFGAAALIMATFAMPSSDVAFAASEVKVVVNNSVITSGDIAKRINFLKLQHQKGDL 67 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 K+A ++L+ ETLK+ EI + ++ ++ V+ F + A + +S + LDK G+G + Sbjct: 68 NKLAQEQLVDETLKRAEISRVRMSVSTSDVDSAFGRFAASNKMSPQQLGQILDKMGVGVD 127 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 HFK Y+A+ WP VV F GN + +N T + + Sbjct: 128 HFKSYIAVSMSWPRVVNARFGSSGGNKLSNDDLVTRMTENKTKPVTTEYFLKQIVFVVPQ 187 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 + + + K E+ C++ + FA+ + DVS+ +L DL ++ LL++ Sbjct: 188 AKRNAILNQRKSEAEASRAKFPGCDQAKVFAATMRDVSVQDLGRVLAPDLPEIWKPLLEQ 247 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE----AEYVKKL 308 ++ NTT P VT +GVEY+AIC +R + ++A A A++ + +Y+ +L Sbjct: 248 AKGNTTTPVVTDRGVEYVAICSQRQVNDDVAAAAVFRAEDIGKAGAQGISANDKKYMDEL 307 Query: 309 RSNAIIHY 316 RS A I Y Sbjct: 308 RSKAQILY 315 >gi|198284724|ref|YP_002221045.1| SurA domain [Acidithiobacillus ferrooxidans ATCC 53993] gi|198249245|gb|ACH84838.1| SurA domain [Acidithiobacillus ferrooxidans ATCC 53993] Length = 477 Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 35/290 (12%), Positives = 101/290 (34%), Gaps = 13/290 (4%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---------LEKIAVQELIVET 84 ++ ++ +N +IT + +R+ ++ + L + +Q++I++ Sbjct: 66 QNTQNLDKVVAVVNDNIITSMQLEQRVGAVRARLQTQNPNAMPPEDILRRQVLQQMILQD 125 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 ++ Q ++GI D T++ A+ L+ + L QG F L + + Sbjct: 126 IELQIAHRAGIKVDKATLDQAISNLAQANHLTPDQLRQALANQGQSWERFTHDLEDRILV 185 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 +++ + + E+ Q++K + + ++ + +PDN + +R + Sbjct: 186 DRLMQQEVENRVHIGPDEVKTFAQQLKEMGGVSFDLQQIFIPLPDNPTPDAVGAARRDAE 245 Query: 205 A-EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYV 262 + L + + +S + G+ ++ +L P L+ + Sbjct: 246 QARDHVLAGERFGRVATQVSSGRDALQGGRLGWIKAGELPPAVAQTLLQLKVGEISPVIP 305 Query: 263 TQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 G + D + A + + + + + ++ Sbjct: 306 GPTGFHIFKLLDVKHGQPTVTEVKTAMIVLRAGNSLQLQEAEARAQDIQQ 355 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 13/123 (10%), Positives = 39/123 (31%), Gaps = 3/123 (2%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKS 253 + R +D +++ + ++ + G+ ++ L + L Sbjct: 344 QEAEARAQDIQQALQSGTRFSELARSYSQDPRTAANGGEMGWVAPGQLPDSLERTLLTLQ 403 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEI-ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 ++P + + +R E + A Q + + E+ +++R A Sbjct: 404 PGGVSSPIRVGNAIYILHSQAQRQQAVEEKQIMAAARMQLYNRIVHERMDEWQRRIRDGA 463 Query: 313 IIH 315 + Sbjct: 464 YVE 466 >gi|260767121|ref|ZP_05876066.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio furnissii CIP 102972] gi|260617876|gb|EEX43050.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio furnissii CIP 102972] gi|315181264|gb|ADT88178.1| survival protein SurA [Vibrio furnissii NCTC 11218] Length = 431 Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 106/307 (34%), Gaps = 12/307 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +KL + ++ + + R+ +N VI DI + +K Sbjct: 1 MKLWKHTLLTLLGLMSIGLVQAQPVEMDRVAVIVNNGVILQSDIDTALLSVKANAKKNNR 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + V++LI++TL++QE E+ G+ D N +N A+ +AE + Sbjct: 61 ALPDEAVLREQVVEKLIIDTLQQQEAERIGVRIDDNRLNEAINDIAKENHQTAEQLRVSV 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 +G+ F++ + + + + L E+ + T + Sbjct: 121 AAEGLTYPEFREQIRKEMSASEARNALVRRRINILPAEVNTLADLLAKETNATIQYKISH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + N Q++ V+ + K E + ++ + G ++ + ++ Sbjct: 181 IQLRFNDGQDKSEVEAQAKKLVEQLNKGADFSTMAITYSKGPKALDGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ P+ + G + I D + + ++ + T + Sbjct: 241 IFADQIKMQNKGTIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDDG 300 Query: 301 EAEYVKK 307 + + + Sbjct: 301 AQKQLNE 307 Score = 79.3 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 32/269 (11%), Positives = 78/269 (28%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I +++ LL + KI+ +L + + ++ +N Sbjct: 154 ILPAEVNTLADLLAKETNATIQYKISHIQLRFNDGQDKSEVEAQAKKLVEQLNKGADFST 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + I Sbjct: 214 MAITYSKGPKALDGGDWGWMRKEEMPTIFADQIKMQNKGTIIGPFRSGVGFHILKIDDVK 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKI-HD 228 TV + I + + QK++ + ++++ Sbjct: 274 GLETVAVTEVNARHILIKPTIILSDDGAQKQLNEFVRRIQAGEATFGELAQQYSQDPGSA 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R++ + ALK Sbjct: 334 AQNGELGYQTPDLYVPEFKHQVETLPVGQISQPFKTVHGWHIVEVLDRREVDRTDSALKN 393 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + + ++++LR+ A + Sbjct: 394 KAYRILFSRKFNEEASAWLQELRAGAFVE 422 >gi|86160750|ref|YP_467535.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-C] gi|85777261|gb|ABC84098.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-C] Length = 338 Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 39/293 (13%), Positives = 96/293 (32%), Gaps = 18/293 (6%) Query: 40 SRIRTTINGEVITDGDISKRIALL------------KLQKINGELEKIAVQELIVETLKK 87 R+ +NG+V+T ++ +R A L + + E + A +++ + L Sbjct: 37 DRVAAIVNGDVVTLQELEQRAAALGLAAADALPAGPERDRARAEALRRAFDQVVSDKLFA 96 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 ++ ++ I V+ + G + S L +G ++ + + + Sbjct: 97 EKAKELEIEVTEKQVDDAIEGVKKQNGFTDAQLESALASEGYSMADYRTRIRRELQNFSL 156 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK---LQNQGFVQKRIKD 204 ++ K E ++ Q E +R IP + Q Q + + Sbjct: 157 LQYKVAGKIKTSEEDLRNYYQSHPQEFDGEDEVRVRHIFIPFPEGGGKQAQAQARAEGQR 216 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 + + + G+ +L +H ++ + Sbjct: 217 VLQRLKTGEDFGAVAKAVSRGPSAEEGGELGWLKRGTIHRTLEDAAFALKTGEISGLVEA 276 Query: 264 QKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 GV + + ++R + + + + E + +YV +LR +A+I Sbjct: 277 GPGVHILKVEERRRGGGKSFEQAREEIRQRLGEEQAENYRQQYVAELRRDALI 329 >gi|329122338|ref|ZP_08250925.1| peptidyl-prolyl cis-trans isomerase [Haemophilus aegyptius ATCC 11116] gi|327473620|gb|EGF19039.1| peptidyl-prolyl cis-trans isomerase [Haemophilus aegyptius ATCC 11116] Length = 313 Score = 132 bits (330), Expect = 8e-29, Method: Composition-based stats. Identities = 57/318 (17%), Positives = 116/318 (36%), Gaps = 20/318 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K+ + + V++ S A + R+ T++G I + + + Sbjct: 1 MKMKKFVLRSFLLAALGCVAFASMAQAGERVVATVDGIPILESQV-------RANMGKKG 53 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI Sbjct: 54 DRQSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISL 113 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI----------PANKQKMKNITVREYLIR 181 N F+Q +A Q + V E+ K + + +EY +R Sbjct: 114 NTFRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVR 173 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY-LLES 240 +L + Q Q ++ + L+ + + G Y E+ Sbjct: 174 HILLKLNPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 233 Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEK 299 Q ++K Q + P+ T+ G + + RD + T+++ Sbjct: 234 YAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRDGDLTAEAYTQKAYERLVNTQLQD 293 Query: 300 HEAEYVKKLRSNAIIHYY 317 ++VK LR A I Y+ Sbjct: 294 ATNDWVKALRKRANIQYF 311 >gi|52424684|ref|YP_087821.1| SurA protein [Mannheimia succiniciproducens MBEL55E] gi|52306736|gb|AAU37236.1| SurA protein [Mannheimia succiniciproducens MBEL55E] Length = 353 Score = 132 bits (330), Expect = 8e-29, Method: Composition-based stats. Identities = 41/328 (12%), Positives = 106/328 (32%), Gaps = 16/328 (4%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYK-SWAMSSRIRTTINGEVITDGDISKRI 60 + + ++ I + ++ ++ + + + ++ T++G I + + + Sbjct: 26 NERNLLNFNNGIMMKPGNLKSLLLVMIGMFAVSVNVQAVEQVVATVDGTPILESQLKRA- 84 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 L Q N A+ ++I + L ++ ++++ + ++ A ++ Sbjct: 85 --LGKQANNATNRAKALDKIIDDMLVQKAVKEANVHISEGQLDKIVENIAAQNNMTYGQL 142 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--- 177 LD QGIG F+ + Q + +V ++ ++M + Sbjct: 143 LDALDYQGIGITKFRNNIRNQLMMAEVRNRSIGKNIDVTREQVETLSKQMLEQAKTQGKK 202 Query: 178 ------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVS 230 + + L + + + + + + ++ + Sbjct: 203 AQVTGTEYQVRHILLKLNPLLNDAQAKAQLNQICSDIQSGKTTFAAAAKDYSKDYLSGAN 262 Query: 231 IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-L 288 G Y P F Q + + + P+ TQ G + + D R A Sbjct: 263 GGDLGYAFPEIYDPAFGQVIKATKKGVISAPFKTQFGWHILEVTDTRQGDMTEAAYRQKA 322 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +++ ++VK LR A I Y Sbjct: 323 YETLVNQQLQDDAKDWVKALRKGAEIKY 350 >gi|53805075|ref|YP_113118.1| peptidyl-prolyl cis-trans isomerase SurA [Methylococcus capsulatus str. Bath] gi|81682783|sp|Q60B78|SURA_METCA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|53758836|gb|AAU93127.1| peptidyl-prolyl cis-trans isomerase SurA [Methylococcus capsulatus str. Bath] Length = 454 Score = 132 bits (330), Expect = 9e-29, Method: Composition-based stats. Identities = 36/312 (11%), Positives = 102/312 (32%), Gaps = 18/312 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGEL 72 + + + + A RI ++ VI + ++ +++ +K + L Sbjct: 12 LGALALFAVVCWSMADAAVDRIVAVVDDGVILESELVRKVDEIKRSLRASRASLPPDSVL 71 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + ++ +IV+ ++ Q EK GI D +T+ Q A+ L+ + F L ++GI Sbjct: 72 VRQVLERMIVDKIQIQMAEKMGIQVDDDTLRMAVSQIAQRNNLTPDQFRRSLAREGIDYG 131 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV----REYLIRTVLFSIP 188 F + + + + + + E+ + L ++ + Sbjct: 132 DFLDQVRSEIAMGRLRASQINNQIKISDREVEHYLEAQGGSGAVADREYRLGHILIATPR 191 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-Q 247 + ++R + + +++ + G + S++ + Sbjct: 192 EASPDEVKKARERADRVVKELKAGLDFKDASIRYSDDPQALEGGDLGWRKLSEIPSHIAE 251 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT---PTKIEKHEAEY 304 + ++P + G + + R +G K ++ ++ Sbjct: 252 VVGGMKDGEVSDPIRSPGGYHIVKMLAMRGVGEAKLTKTHVRHILIRPNEVLSDEDAKNK 311 Query: 305 VKKLRSNAIIHY 316 + L++ I Sbjct: 312 LLALKTR--IEN 321 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 48/139 (34%), Gaps = 3/139 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLE 239 I N++ + + ++ + + + G ++ Sbjct: 291 HVRHILIRPNEVLSDEDAKNKLLALKTRIENGDDFAELARGHSDDKGSAIKGGDLGWVKP 350 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKI 297 L P F+ + +N ++P TQ G I + ++++ LK + K+ Sbjct: 351 GALVPPFEEAMNALDENQLSDPVQTQFGWHLIQVLERQESSDTNEVLKNRARDELFKRKV 410 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ +++K+R A + Sbjct: 411 DEETELWLRKIRDEAYVEI 429 >gi|90416848|ref|ZP_01224777.1| peptidyl-prolyl cis-trans isomerase SurA [marine gamma proteobacterium HTCC2207] gi|90331195|gb|EAS46439.1| peptidyl-prolyl cis-trans isomerase SurA [marine gamma proteobacterium HTCC2207] Length = 434 Score = 132 bits (330), Expect = 9e-29, Method: Composition-based stats. Identities = 34/317 (10%), Positives = 104/317 (32%), Gaps = 15/317 (4%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 K T + ++ + + + ++ ++ +V+ + ++ +R+A + Q Sbjct: 3 LKKTCNTALLAVLLGAFSVTASAQIEILDKVVAIVDEDVVLESEVQRRLATIYAQIQQSG 62 Query: 72 LE--------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 + + ++ LI E L+ +GI +N + A++ L+ E ++ Sbjct: 63 TQPPPQEIIVQQVLERLISERLQLNMGYSAGIRITDAELNDAMARIAKSNQLTMEQYAEQ 122 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI--- 180 + G ++ ++ + + I V + M + E+ + + + Sbjct: 123 IHATGSTLSNVREEIRNEMILMRVQQGQVMRRIRISNQELDNFLNSEEGRFMTSPDVNVG 182 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 +L + +R + + ++ + G + + Sbjct: 183 HILLPVPSGKNTDEVNAILQRAQGILDQANSGTDFRQLAIANSADQTALQGGDLGWRKMA 242 Query: 241 DLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTK 296 L F + + K + + P + G I + +++ + E ++ + + Sbjct: 243 QLPGVFIEAVEKLEIDQVSEPIRSDAGYHLIKLYERKGGGEQLIEQHFARHILIKPNQIR 302 Query: 297 IEKHEAEYVKKLRSNAI 313 E + +LR Sbjct: 303 DEATVVSQLTELRERIK 319 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 18/146 (12%), Positives = 53/146 (36%), Gaps = 3/146 (2%) Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIG 232 I N+++++ V ++ + E ++F+ ++ G Sbjct: 283 EQLIEQHFARHILIKPNQIRDEATVVSQLTELRERIKAGEDFALLTKEFSEDPGSALNGG 342 Query: 233 KAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSA 290 + + P+F+ + N + P+++Q G + + ++R+ E + Sbjct: 343 ELGWSTPGMFVPEFEQTMGSIELNEVSAPFLSQFGWHILQVTERRNQDFSENITRNRAQN 402 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHY 316 K E+ +++++R A + Sbjct: 403 LLRQRKYEEELQVWLQEIRDEAFVEI 428 >gi|146309025|ref|YP_001189490.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas mendocina ymp] gi|145577226|gb|ABP86758.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas mendocina ymp] Length = 430 Score = 132 bits (330), Expect = 9e-29, Method: Composition-based stats. Identities = 36/287 (12%), Positives = 94/287 (32%), Gaps = 15/287 (5%) Query: 40 SRIRTTINGEVITDGDISKRIALLK--------LQKINGELEKIAVQELIVETLKKQEIE 91 R+ ++ +V+ + R+ ++ L + ++ LI+E ++ Q E Sbjct: 31 DRVVAIVDNDVVMQSQLDARLREVQQTIDKRGGALPPEHVLSQQVLERLIIENIQLQIGE 90 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 +SGI +N A+ G+S E F L + G+ + + + I V + Sbjct: 91 RSGIRITDEELNQAMGTIAQRNGMSLEQFRQALARDGLSYADARDQVRREMIISRVRQRR 150 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIR---TVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + E+ R ++ ++ ++ + Sbjct: 151 VAERIQVTDQEVQNFLASDLGKMQLSEEFRLANILIPVSEGASSSEIQAADRQARELYQQ 210 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 + ++ + G+ + L P F +++ + + T P T G Sbjct: 211 LQQGADFAQLAISRSASETALEGGEMGWRKAGQLPPPFDSMISQLNPGEVTEPVRTPGGF 270 Query: 268 EYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + +KR + ++ + + + + V++L Sbjct: 271 IILKLIEKRGGDTQVRDEVHVRHILIKPSEIRSPEETRRLVERLYQR 317 Score = 89.0 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 14/138 (10%), Positives = 53/138 (38%), Gaps = 3/138 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 I +++++ ++ ++ + + + F+ ++ G ++ Sbjct: 290 HVRHILIKPSEIRSPEETRRLVERLYQRIVAGEDFAELAKSFSEDPGSALNGGDLNWIDP 349 Query: 240 SDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKI 297 + L P+F+ ++ ++ + P+ TQ G + + +R + + K Sbjct: 350 NALVPEFRQVMSETASGELSKPFQTQFGWHVLQVMGRRATDSSAQFREQQAANLLRNRKY 409 Query: 298 EKHEAEYVKKLRSNAIIH 315 ++ +++++R A + Sbjct: 410 DEELQAWLRQIRDEAYVE 427 >gi|289209139|ref|YP_003461205.1| peptidylprolyl isomerase [Thioalkalivibrio sp. K90mix] gi|288944770|gb|ADC72469.1| Peptidylprolyl isomerase [Thioalkalivibrio sp. K90mix] Length = 475 Score = 132 bits (330), Expect = 9e-29, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 94/300 (31%), Gaps = 19/300 (6%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEKIAVQELIVETLK 86 + RI + +V+T ++ +R+ L+ Q L + ++ LIVE ++ Sbjct: 66 GDQFTDRILAVVGDDVVTQRELVERMNLVAQQMMERGTRPPDRDTLARQVMERLIVERVQ 125 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 QE ++ GI D T+N AR ++ L + G+ N F++ + + Sbjct: 126 LQEAQRVGINIDEMTLNRAMENIARENRMTLPQLRQALLQDGVDFNAFREQIRNELTVNQ 185 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 + + + + EI R R + + + G + + A Sbjct: 186 LQRRQVDNQIRVSDQEIADLIASESGAIDRGVRYRIAHIQVSLPRGADSGQIATAREKAR 245 Query: 207 ESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYV 262 E R R+ + + + + G + ++ F ++ Sbjct: 246 ELRQRVREGEDFASVAISESDAPDALEGGDLGWRTAGEIPSVFAREAVLMRTGEISDVLR 305 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNT-------PTKIEKHEAEYVKKLRSNAIIH 315 + G + + D+ + + + + ++R + Sbjct: 306 SPNGFHIMKLVDREGGDQTRVRQTQVRHILISPDQVRSDEEARRQAESLYNRIREGSDFE 365 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 20/157 (12%), Positives = 52/157 (33%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + R + I +++++ +++ + Sbjct: 312 IMKLVDREGGDQTRVRQTQVRHILISPDQVRSDEEARRQAESLYNRIREGSDFEALARAN 371 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL-G 279 + G+ ++ +L P+F+ + + P +Q G I + D R++ Sbjct: 372 SDDPGSAAQGGQLGWISPGELVPEFEEAMNALQPGEISEPVESQFGWHIIEVLDHREVDT 431 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++A K E+ ++++LR A + Y Sbjct: 432 SREQIRARAREILQNRKREEEIELWMRRLRDEAYVEY 468 >gi|153009931|ref|YP_001371146.1| SurA domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|151561819|gb|ABS15317.1| SurA domain protein [Ochrobactrum anthropi ATCC 49188] Length = 319 Score = 132 bits (330), Expect = 9e-29, Method: Composition-based stats. Identities = 72/317 (22%), Positives = 133/317 (41%), Gaps = 8/317 (2%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + + F +L+ L V + ++ + A S ++ ++G IT+ DI R+A LK Sbjct: 1 MMIARPLFASMLSAAVCLTTLGTVAVPAFAAGAG-SEVKVIVSGNAITNSDIQHRVAFLK 59 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 LQ+ G L ++A +EL E LK+ E++ I V+ + A +S + + Sbjct: 60 LQRKGGNLSQVAKEELTDEMLKRIEMKSRSINITDQQVDEAYAGFASRNKMSLAQLNQLM 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ G+ +HFK+Y+ +Q W +V F E E K R Sbjct: 120 NQSGVTPDHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKDGGKKPVATEYRLQQ 179 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + + K + + C+ + A I DV++ ++E L Sbjct: 180 VIFVIPASKRSPALLSKRKQEANALRSRFQSCDATRQQAKGILDVTVRDLGRIIEQQLPN 239 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ------NTPTKI 297 ++ + + S TT P T+KGVE++A+C R + + + S + K Sbjct: 240 EWAKAVKATSVGGTTPPQETEKGVEFLAVCSTRQISDDRVAQLVFSMEGADSPAGQEKKA 299 Query: 298 EKHEAEYVKKLRSNAII 314 E+ +Y+K+LR A I Sbjct: 300 EQLSEKYLKELREKATI 316 >gi|309972385|gb|ADO95586.1| Putative survival protein SurA-like protein [Haemophilus influenzae R2846] Length = 313 Score = 132 bits (330), Expect = 9e-29, Method: Composition-based stats. Identities = 54/318 (16%), Positives = 109/318 (34%), Gaps = 20/318 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K+ + + V++ S A R+ T++G I + + + Sbjct: 1 MKMKKFILKSFLLATLGCVAFTSMAQAEERVVATVDGIPILESQV-------RANMGKKG 53 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + A+ ++I + L ++ I++SG+ D ++ A GL+ F LD QGI Sbjct: 54 DRQSALDKIIDDLLVQKAIQESGVKIDPREIDRVVEDTAARNGLTYGQFLDALDYQGISL 113 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI---------PANKQKMKNITVREYLIRT 182 N F+Q +A Q + V E+ A Q + Sbjct: 114 NTFRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLDEAKSQGTAQKVTGKEYEVR 173 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY-LLES 240 + + L + ++ K + + K++ + G Y E+ Sbjct: 174 HILLKLNPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 233 Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEK 299 Q ++K Q + P+ T+ G + + D + T+++ Sbjct: 234 YAPQFAQTVMKSKQGVISAPFKTEFGWHILEVTGVSDGDLTAEAYTQKAYERLVNTQLQD 293 Query: 300 HEAEYVKKLRSNAIIHYY 317 ++VK LR A I Y+ Sbjct: 294 ATNDWVKALRKRANIQYF 311 >gi|16272406|ref|NP_438619.1| stationary-phase survival protein SurA [Haemophilus influenzae Rd KW20] gi|260580479|ref|ZP_05848307.1| stationary-phase survival protein SurA [Haemophilus influenzae RdAW] gi|1174486|sp|P44721|SURA_HAEIN RecName: Full=Chaperone surA homolog; Flags: Precursor gi|1573432|gb|AAC22116.1| stationary phase survival protein SurA, putative [Haemophilus influenzae Rd KW20] gi|260092821|gb|EEW76756.1| stationary-phase survival protein SurA [Haemophilus influenzae RdAW] Length = 313 Score = 132 bits (330), Expect = 9e-29, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 111/318 (34%), Gaps = 20/318 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K+ + + V++ S A R+ T++G + + + + Sbjct: 1 MKMKKFVLRSFLLATLGCVAFTSMAQAEERVVATVDGIPVLESQV-------RANMGKKG 53 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI Sbjct: 54 DRQSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISL 113 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI---------PANKQKMKNITVREYLIRT 182 N F+Q +A Q + V E+ A Q + Sbjct: 114 NTFRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLDEAKSQGTAQKVTGKEYEVR 173 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY-LLES 240 + + L + ++ K + + K++ + G Y E+ Sbjct: 174 HILLKLNPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 233 Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEK 299 Q ++K Q + P+ T+ G + + RD + T+++ Sbjct: 234 YAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRDGDLTAEAYTQKAYERLVNTQLQD 293 Query: 300 HEAEYVKKLRSNAIIHYY 317 ++VK LR A I Y+ Sbjct: 294 ATNDWVKALRKRANIQYF 311 >gi|258627055|ref|ZP_05721853.1| survival protein SurA [Vibrio mimicus VM603] gi|258580729|gb|EEW05680.1| survival protein SurA [Vibrio mimicus VM603] Length = 431 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 107/313 (34%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +KL + +I + ++ + +N VI D+ + +K Sbjct: 1 MKLWKPTLISVISALTLFNAHAEPEQLDGVAVIVNSGVILQSDVDGALKTVKANAKQNNQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LI++TL++QE E+ G+ D N +N + A+N + E S + Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEAERIGVKIDDNRLNDAIKEIAKNNQQTQEQLISSV 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ F++ + + D + L E+ + + T + Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + Q++ + ++ + G ++ + ++ Sbjct: 181 IQLRVEEGQDKSEAESLANKLVGELKHGADFAQMAYTYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ + P+ + G + I D + + ++ + T ++ Sbjct: 241 IFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEG 300 Query: 301 EAEYVKKLRSNAI 313 + + + Sbjct: 301 AQKQLNEFVQRIK 313 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 34/269 (12%), Positives = 82/269 (30%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + KI+ +L VE + + +S + + Sbjct: 154 ILPAEVDTLAELLAQETDATVQYKISHIQLRVEEGQDKSEAESLANKLVGELKHGADFAQ 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I Sbjct: 214 MAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKI-HD 228 TV + I + + QK++ + + ++++ Sbjct: 274 GLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEATFGELAQQYSQDPGSA 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R++ + ALK Sbjct: 334 AQKGELGYQTPDLYVPEFKHQIEILPVGQISEPFQTVHGWHIVEVLDRREVDRTDSALKN 393 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + + ++++LR++A + Sbjct: 394 KAYRILFNRKFNEEASAWLQELRASAFVE 422 >gi|86160749|ref|YP_467534.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-C] gi|85777260|gb|ABC84097.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-C] Length = 317 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 35/310 (11%), Positives = 87/310 (28%), Gaps = 19/310 (6%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71 + L C + + +NGE I +++ + + Sbjct: 8 ILIATALAAGCGRCGGARSGERPAPGAVAVVNGEPIPPDALARELRDAQAGAEGQAPAAG 67 Query: 72 --LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 L + + +L+ L Q+ I + V F++ F L ++ + Sbjct: 68 DVLRRRVLDDLVDRALLLQQARARSIVVGQDQVERAFLRLRAE--YPGTHFDDLLAQERL 125 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 K L Q + + + + ++ E+ + + + + Sbjct: 126 SQAELKARLKDQLTVERLFEQEVFPQVQVVDAEVERYYAEHGAEFQEPERVHVLQIVV-- 183 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQN 248 ++ + E+ R + + G ++ F Sbjct: 184 ------ASREEAAQVREKLRRNPQTFAEVARRSSIAPEGKGGGDLGFIGRGSGFPEVFDT 237 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVK 306 N ++ + G + +K+ +A ++ + K +AEY++ Sbjct: 238 CFALPVNVISDVTPSPYGFHLFKVVEKKPAQRRTLEQARAEIAEKLGREKRAGAQAEYLE 297 Query: 307 KLRSNAIIHY 316 LR A I Sbjct: 298 ALRKRAQIEI 307 >gi|237749066|ref|ZP_04579546.1| chaperone SurA [Oxalobacter formigenes OXCC13] gi|229380428|gb|EEO30519.1| chaperone SurA [Oxalobacter formigenes OXCC13] Length = 459 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 39/326 (11%), Positives = 95/326 (29%), Gaps = 33/326 (10%) Query: 19 YFVLIIFCIVPIVSYKSWAMS--------SRIRTTINGEVITDGDISKRIALLKLQKING 70 +L + I +N +VIT G++++R+ L++ Q Sbjct: 16 ALILAFGVFFSATVLAQDNQAQPSKQVVVDSIAAIVNSDVITKGELNERVTLVEAQLKQQ 75 Query: 71 EL--------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 + +K ++ +IVE + Q + G+ D ++ A +S F Sbjct: 76 NIALPPRTEFQKQVLEHMIVERAQLQLAKDMGLRVDDTQLDRTIALMAEQNHMSLAQFKR 135 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLI 180 ++ G F++ + + + + + K + E+ + + E L Sbjct: 136 QTEQNGTPFEKFREKVREEITMSRLRDREVVNKIQINDAEVDNLLGADSQLQMPEQLRLG 195 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 ++ + + + R + + ++ +S G + Sbjct: 196 HILIRIPENASPEQIAEKRARAEKVLDVLKSGGDFQQTAASYSDADEGLSGGDIGWRSTD 255 Query: 241 DLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--------------GGEIALK 285 L F L N T + G + + D+R + + Sbjct: 256 RLPKSFVDALAGVKPGNVTGIIKSPNGFHILKVLDRRKMTNGAESVASASDKNTVQQIHA 315 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ + + LR Sbjct: 316 RHILIKVNQLVSADEAKRKLIDLRQR 341 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 48/147 (32%), Gaps = 2/147 (1%) Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 + + + + + + +K I + + + +++ Sbjct: 306 DKNTVQQIHARHILIKVNQLVSADEAKRKLIDLRQRIINKSATFEELAKTYSNDGSASRG 365 Query: 232 GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LS 289 G ++ D P+F+ + + P TQ G I + DK+ K Sbjct: 366 GDLGWIYPGDTVPEFEKAMVALKPGEISEPIETQFGFHLIQVLDKKTDDVSAERKRIAAK 425 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K+ + E++++LR A + Y Sbjct: 426 QALRERKVAEATEEWLRQLRDKAYVEY 452 >gi|269137960|ref|YP_003294660.1| peptidyl-prolyl cis-trans isomerase SurA [Edwardsiella tarda EIB202] gi|267983620|gb|ACY83449.1| peptidyl-prolyl cis-trans isomerase SurA [Edwardsiella tarda EIB202] gi|304558008|gb|ADM40672.1| Survival protein SurA precursor [Edwardsiella tarda FL6-60] Length = 435 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 114/310 (36%), Gaps = 18/310 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +++ + ++ + + ++ ++ V+ + D+ + +KL + L Sbjct: 7 LILGVALCANTAFAAPQVVDKVVAIVDNGVVLESDVDGMMKSVKLNAQQADQQLPDNATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ ++ Q ++ G+ + ++ A+ +S + S L G+ Sbjct: 67 RHQILERLIMDNVQLQMAKRMGLEISDSELDNAINGIAQQNHISMQQLRSRLAADGLDYK 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L E+ A +++ + E + IP + Sbjct: 127 TYRAQIRKEMLISEVRNNEVRRRVTILPQEVDALAKQIGSQNSGETAVNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAE---ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 Q V + + AE + + +++ + G+ + +L F + Sbjct: 187 PTQQQVSEAQQQAESLIQQLHQGASFAKLAAAYSADPQALKGGEMGWGRLQELPTLFAEA 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 L + + P + G + + D R ++ ++ + +P + Sbjct: 247 LQSAKKGDIVGPIRSGVGFHILRVNDLRGDQANVSVTEVHARHILLRTSPVMSDAQARAK 306 Query: 305 VKKLRSNAII 314 ++ L +A I Sbjct: 307 LEAL--SAQI 314 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 35/285 (12%), Positives = 81/285 (28%), Gaps = 17/285 (5%) Query: 47 NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 N EV I ++ + Q ++ LI + + S + + Sbjct: 143 NNEVRRRVTILPQEVDALAKQIGSQNSGETAVNLS-HILIPLPENPTQQQVSEAQQQAES 201 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-------FML 154 + Q A L+A + +G + + Sbjct: 202 LIQQLHQGASFAKLAAAYSADPQALKGGEMGWGRLQELPTLFAEALQSAKKGDIVGPIRS 261 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 G + + + N++V E R +L Q K + + Sbjct: 262 GVGFHILRVNDLRGDQANVSVTEVHARHILLRTSPVMSDAQA-RAKLEALSAQITSGKIT 320 Query: 215 DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAI 272 ++++ G + + S P F++ +K ++ + P + G I + Sbjct: 321 FEQAAKEYSQDPGSAQKGGDLGWAVPSMYDPAFRDALMKLNKGEISQPVHSNFGWHLIQL 380 Query: 273 CDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 R + + A K K + ++++ R+ A + Sbjct: 381 LGTRQVDRTDEAQKERAYRMLFNRKFAEEAQTWLQEQRAAAYVKI 425 >gi|260582276|ref|ZP_05850069.1| stationary-phase survival protein SurA [Haemophilus influenzae NT127] gi|260094644|gb|EEW78539.1| stationary-phase survival protein SurA [Haemophilus influenzae NT127] Length = 313 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 57/318 (17%), Positives = 115/318 (36%), Gaps = 20/318 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K+ + + V++ S A R+ T++G I + + + Sbjct: 1 MKMKKFILKSFLLATLGCVAFTSMAQAEERVVATVDGIPILESQV-------RANMGKKG 53 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI Sbjct: 54 DRQSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISL 113 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI----------PANKQKMKNITVREYLIR 181 N F+Q +A Q + V E+ K + + +EY +R Sbjct: 114 NTFRQQIANQMVMGAVRNKAIQESIDVTRAEVVALGQKMLEEAKEKGTAQKVMGKEYEVR 173 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY-LLES 240 +L + Q Q ++ + L+ + + G Y E+ Sbjct: 174 HILLKLNPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 233 Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEK 299 Q ++K Q + P+ T+ G + + RD + T+++ Sbjct: 234 YAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRDGDLTAEAYTQKAYERLVNTQLQD 293 Query: 300 HEAEYVKKLRSNAIIHYY 317 ++VK LR A I Y+ Sbjct: 294 ATNDWVKALRKRANIQYF 311 >gi|120556415|ref|YP_960766.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinobacter aquaeolei VT8] gi|120326264|gb|ABM20579.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinobacter aquaeolei VT8] Length = 447 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 43/325 (13%), Positives = 115/325 (35%), Gaps = 20/325 (6%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK- 67 + ++ T + + ++ + + + R+ ++ EVI ++ RI + + Sbjct: 1 MKATVRHGLTILLTLAMVVLSVTAQAERKLLDRVVAIVDDEVILQSELDARINTIVGRLS 60 Query: 68 -------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LE+ + +LI E+L+ Q ++ G+ N +N AR+ G++ +F Sbjct: 61 AQGTGLPPRELLEQRVLDQLIQESLQLQMADQMGMRISDNELNETLANIARSNGMTLAEF 120 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 L ++G+ ++ + + + V + + + E+ Q + + Sbjct: 121 EGQLAEEGVTYQQAREQIRNEMLTSRVQQRRVGNRVRVTDREVENYLQAQQANGSTDAEY 180 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYL 237 R I + ++ V + + A+ R ++ + + + + G + Sbjct: 181 RLAYIFIEVDDPASEASVDEARETAQALRQQIANGRDFREVAVAESDASNALEGGDMGWR 240 Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPT 295 ES L ++ + G + + DKR + ++ + + Sbjct: 241 SESQLPSLVAPVVPDLEVGEPSQVLENNSGFHLVMVMDKRGGEQQQFIQQHRVRHILVRP 300 Query: 296 -------KIEKHEAEYVKKLRSNAI 313 + E+ E ++L+ A Sbjct: 301 SEAVTDVQAEQRIREIYQQLQDGAD 325 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 27/286 (9%), Positives = 82/286 (28%), Gaps = 20/286 (6%) Query: 45 TINGEV-ITDGDISKRIALLKLQKING----------ELEKIAVQELIVETLKKQEIEKS 93 + V +TD ++ + + E++ A + + E + + + Sbjct: 151 RVGNRVRVTDREVENYLQAQQANGSTDAEYRLAYIFIEVDDPASEASVDEARETAQALRQ 210 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 I + + + L D + Q V++N+ Sbjct: 211 QIANGRDFREVAVAESDASNALEGGDMGWRSESQLPSLVAPVVPDLEVGEPSQVLENNSG 270 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + + + R + ++ ++RI++ + Sbjct: 271 FHLVMVMDK------RGGEQQQFIQQHRVRHILVRPSEAVTDVQAEQRIREIYQQLQDGA 324 Query: 214 KDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIA 271 + + + G ++ + P F+ + ++Q P+ +Q G + Sbjct: 325 DFADLARERSDDPVSGSDGGNLGWVSPGQMVPAFEEAMNQAQVGEYFGPFRSQFGWHILQ 384 Query: 272 ICDKRDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++R + K E +++++R A + + Sbjct: 385 VEERRRQDVTEQNRESQARQAIYMRKFELELQNWLREIRDEAFVEF 430 >gi|329119266|ref|ZP_08247953.1| sura/ppiase domain protein [Neisseria bacilliformis ATCC BAA-1200] gi|327464613|gb|EGF10911.1| sura/ppiase domain protein [Neisseria bacilliformis ATCC BAA-1200] Length = 321 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 94/289 (32%), Gaps = 14/289 (4%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKI------NGELEKIAVQELIVETLKKQEIEKS 93 I VIT + A + EL + + +L+ L Q ++ Sbjct: 29 DGIAAVAGDAVITVRQLDNAAAAARQSIPAAQRPSENELRRHILAQLVNRALVVQAGKRR 88 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 GIT + A + E+ + K GI ++ A I V + + Sbjct: 89 GITASEAETDEALAHAAAQKHTTVENLYAQNAKNGISRATLRKDTAEGIIAEKVRQQAIL 148 Query: 154 LKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + E+ A ++ K R I K + I+ + Sbjct: 149 QQARVSDAEVDAAIERAKQQGITLPAGKPVRQYRARHILIKAEKDNALASAESVIRKIQN 208 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKG 266 + ++++ G + + + P+F++ +KK + + P TQ G Sbjct: 209 QAKAGRDFGDLAKQYSQDTSAAQGGDLGWFGDGVMVPEFEDAVKKLKKGQISRPVKTQFG 268 Query: 267 VEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I + D R+ E + + K E A+ +++L +A + Sbjct: 269 WHLIQLTDTRESGTPEERQRNAVRQYIMQQKAEAASAQLLQQLHESAYV 317 >gi|295675486|ref|YP_003604010.1| SurA domain protein [Burkholderia sp. CCGE1002] gi|295435329|gb|ADG14499.1| SurA domain protein [Burkholderia sp. CCGE1002] Length = 477 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 39/334 (11%), Positives = 101/334 (30%), Gaps = 34/334 (10%) Query: 12 FIKLLTTYFVLIIFCIVPIV-----------SYKSWAMSSRIRTTINGEVITDGDISKRI 60 +K L + S I +N VIT ++ +R+ Sbjct: 26 IMKQLRLAILAAGLVAAASFVPVASVQAQALGGNSGQTVDTIAAVVNNGVITQRELDERV 85 Query: 61 ALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 L+ + L + + ++++E ++ Q+ ++ GI D V + A+ Sbjct: 86 GLIAHRLNQQNAPVPPTDQLRQQVLTQMVLERIQLQKAKEDGINIDDAAVQRTLERLAQA 145 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK- 171 + + + ++ QG+ F + + + + K + E+ + Sbjct: 146 NNMPLAMYRARIEAQGVPWATFSNDARTELTLSRLREKEVDSKITVTDAEVANYIASQRG 205 Query: 172 ---NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 T ++ + + + + QK+ + + + Sbjct: 206 PGAGQTSDLHMQHIFVSAPLNAPETDIEAAQKKAQGLLAEAKGGADFGKLAKANSQAPDA 265 Query: 229 -VSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGE---- 281 + G +L S L P+F + + T G E + + ++R G Sbjct: 266 SKNGGDLGFLAPSKLPPEFVKAASTLRPGEISPDLIRTNDGFEIVRLVERRAGQGTSADA 325 Query: 282 ----IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ + + E + + +R+ Sbjct: 326 PKLVQTHVRHILLRVGDGQSEPQARQKLIDIRNQ 359 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 19/145 (13%), Positives = 48/145 (33%), Gaps = 2/145 (1%) Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + + Q++ ++++ D ++ G Sbjct: 324 DAPKLVQTHVRHILLRVGDGQSEPQARQKLIDIRNQIAAGGDFAKFAHTYSQDGSSSQGG 383 Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSA 290 ++ + P+F+ + + P ++ G I + +RD G IA + Sbjct: 384 DLGWISPGETVPEFERAMNALQDGQISEPVRSEYGYHLIQVLGRRDAEGSIAQQMDLARQ 443 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIH 315 K E+ A+++++LR A + Sbjct: 444 AIGQRKAEQAYADWLRELRDTAYVE 468 >gi|261209784|ref|ZP_05924089.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio sp. RC341] gi|260841174|gb|EEX67687.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio sp. RC341] Length = 431 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 108/313 (34%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +KL T + +I + ++ + +N VI D+ + +K + Sbjct: 1 MKLWKTTLISVISMLTLFNAHAEPQQLDGVAVIVNSGVILQSDVDGALKTVKANAKQNKQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LI++TL++QE ++ G+ D N +N + A+N + E + + Sbjct: 61 PLPQESVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ F++ + + D + L E+ + + T + Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + Q++ + ++ + G ++ + ++ Sbjct: 181 IQLRVEEGQDKSEAESLANKLVGELKHGADFAQMAYTYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ + P+ + G + I D R + ++ + T + Sbjct: 241 IFADQIKMQNKGSIIGPFRSGVGFHILKIDDVRGLETVAVTEVNARHILIKPTIILSDDG 300 Query: 301 EAEYVKKLRSNAI 313 + + + Sbjct: 301 AQKQLSEFVQRIK 313 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 34/270 (12%), Positives = 81/270 (30%), Gaps = 4/270 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + KI+ +L VE + + +S + + Sbjct: 154 ILPAEVDTLAELLAQETDATVQYKISHIQLRVEEGQDKSEAESLANKLVGELKHGADFAQ 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I Sbjct: 214 MAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVR 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKI-HD 228 TV + I + + QK++ + + ++++ Sbjct: 274 GLETVAVTEVNARHILIKPTIILSDDGAQKQLSEFVQRIKNGEVSFGELAQQYSQDPGSA 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R + + ALK Sbjct: 334 AQKGELGYQTPDLYVPEFKHQVETLPVGQISEPFKTVHGWHIVEVLDRRQVDRTDSALKN 393 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + + ++++LR++A + Sbjct: 394 KAYRILFNRKFNEEASAWLQELRASAFVEI 423 >gi|258623407|ref|ZP_05718411.1| survival protein SurA [Vibrio mimicus VM573] gi|258584373|gb|EEW09118.1| survival protein SurA [Vibrio mimicus VM573] Length = 431 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 107/313 (34%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +KL + +I + ++ + +N VI D+ + +K Sbjct: 1 MKLWKPTLISVISALTLFNAHAEPEQLDGVAVIVNSGVILQSDVDGALKTVKANAKQNNQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LI++TL++QE E+ G+ D N +N + A+N + E S + Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEAERIGVKIDDNRLNDAIKEIAKNNQQTQEQLISSV 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ F++ + + D + L E+ + + T + Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + Q++ + ++ + G ++ + ++ Sbjct: 181 IQLRVEEGQDKSKAESLANKLVGELKHGADFAQMAYTYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ + P+ + G + I D + + ++ + T ++ Sbjct: 241 IFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEG 300 Query: 301 EAEYVKKLRSNAI 313 + + + Sbjct: 301 AQKQLNEFVQRIK 313 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 34/269 (12%), Positives = 82/269 (30%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + KI+ +L VE + + +S + + Sbjct: 154 ILPAEVDTLAELLAQETDATVQYKISHIQLRVEEGQDKSKAESLANKLVGELKHGADFAQ 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I Sbjct: 214 MAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKI-HD 228 TV + I + + QK++ + + ++++ Sbjct: 274 GLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEATFGELAQQYSQDPGSA 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R++ + ALK Sbjct: 334 AQKGELGYQTPDLYVPEFKHQIEILPVGQISEPFQTVHGWHIVEVLDRREVDRTDSALKN 393 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + + ++++LR++A + Sbjct: 394 KAYRILFNRKFNEEASAWLQELRASAFVE 422 >gi|89898918|ref|YP_521389.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodoferax ferrireducens T118] gi|121956453|sp|Q223E5|SURA_RHOFD RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|89343655|gb|ABD67858.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodoferax ferrireducens T118] Length = 459 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 92/294 (31%), Gaps = 20/294 (6%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQELIVETLKKQE 89 + I +N E IT+ ++ + + Q L + ++ LI E + Q Sbjct: 50 AADYIVAVVNSEPITNNEVRAALQRVLQQLAQQGNPQVDSKTLVRQVLERLINEKAQLQL 109 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 +SGI D ++ AR L+ + L ++G F+ L Q + + + Sbjct: 110 ARESGIAADEAAIDQAEQNIARQNQLTVAELRRRLTQEGGVPGQFRNQLRDQILLTRLRE 169 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + E+EI ++ ++ T I + V A+ + Sbjct: 170 REVEPRARVSELEIDQFLREQQSSTPAVQQINLAQVLVSVPDTATPVQVTALQARAQRAL 229 Query: 210 LRLPKDCNK------LEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYV 262 R + + K + G+ P F + + + Sbjct: 230 ARARAGEDFVTLVREFSDASDKASLANGGELGLRTADRYPPLFLEATHNLAVGEISALVR 289 Query: 263 TQKGVEYIAICDKRDL-----GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + G + + +K+ + ++ + +P E + + + + Sbjct: 290 SGAGFHILKVLEKKSAALPAMTVTQSRARHILLRVSPQLTESAARDKLNEFKKR 343 Score = 95.9 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 17/170 (10%), Positives = 47/170 (27%), Gaps = 2/170 (1%) Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + G +++ K + +L K + + Sbjct: 284 ISALVRSGAGFHILKVLEKKSAALPAMTVTQSRARHILLRVSPQLTESAARDKLNEFKKR 343 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKG 266 + G + P+F+ ++ + + P V++ G Sbjct: 344 VAAGQADFAALARDHSQDGSAAQGGDLGWANPGMFVPEFEAVMNSLTPGQISEPLVSRFG 403 Query: 267 VEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 V I + ++R + + A K+++ + + +R A + Sbjct: 404 VHLIQLMERRQATLSPQEQREAVRAMLHEKKLDEAYISWAQDVRGRAYVE 453 >gi|153007318|ref|YP_001381643.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. Fw109-5] gi|152030891|gb|ABS28659.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. Fw109-5] Length = 323 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 43/293 (14%), Positives = 95/293 (32%), Gaps = 17/293 (5%) Query: 40 SRIRTTINGEVITDGDISKRI--ALLKLQKINGELE---------KIAVQELIVETLKKQ 88 R+ +NGEV+T ++++R ALLK +++ E K A +++ E L + Sbjct: 23 DRVAALVNGEVVTLSELAERAGPALLKAEQLPAGAERESAQTAALKRAFDDVVAERLLQS 82 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 + + + V+ R G L +QGI F+ + + V+ Sbjct: 83 KAAELQLEATEAQVDEAVEDIKRRNGFDDAALERALKEQGIDRATFRANVKREYDAFLVL 142 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + K + ++ Q E ++ +P + + K Sbjct: 143 QYQVRSKVKVSDDDLRNYYQSHPQEFGGEDEVKVRHIFLPMPEGATKAQQAKVEDQMNRV 202 Query: 209 RLRLPKDCNKLE---KFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 RL + + + G +L + ++ + P Sbjct: 203 LQRLKTGEDFAAVAREVSKGPSAAEGGDLGWLRRGTIDKALEDTAFALQAGQLSQPVRAG 262 Query: 265 KGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 G+ + ++R K + A + + + + +LR +A+I Sbjct: 263 PGLHLFKVEERRVAGEKSFEDAKEEIRAHLVDQQAGTYRQQLIAELRRDALIE 315 >gi|297537786|ref|YP_003673555.1| SurA domain-containing protein [Methylotenera sp. 301] gi|297257133|gb|ADI28978.1| SurA domain protein [Methylotenera sp. 301] Length = 448 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 52/318 (16%), Positives = 106/318 (33%), Gaps = 19/318 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWA---MSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 IK + +L + A RI ++ VIT+ ++ RIA + Q Sbjct: 15 IKHAIQFILLASVLFIGNQFNAQAADIVKLDRIVAIVDQTVITEQELESRIATVTAQFKK 74 Query: 70 GE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 L K ++ LI +TL+ Q + G+ D N ++ + A L+ +FS Sbjct: 75 QGTELPEESVLRKQILERLITDTLQIQYAAQIGLKVDDNQLDKTVERIADQNNLTLTEFS 134 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 L K GI F+ + + + + + + E EI ++ Sbjct: 135 EALAKDGISMRKFRADIRNEITVARLREREVDGRVNVSESEIDNYLTSQASLNENTDEFE 194 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLL 238 I + +QK +E+ +L + + F+ + + G + Sbjct: 195 ISHILIRTPEEGATEDIQKAKAKVDEALSQLNSGVSFAKVSASFSDAPNALEGGSLGWKK 254 Query: 239 ESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNT 293 S + F L + P + G + + +KR L + ++ + T Sbjct: 255 GSQMPALFLDALKNMQAGEVSAPLRSPNGFHLLKLTNKRGGNSPLVIQQTHARHILIKIT 314 Query: 294 PTKIEKHEAEYVKKLRSN 311 +K + ++ Sbjct: 315 EVMSDKEAETKIDAIKER 332 Score = 96.3 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 49/139 (35%), Gaps = 2/139 (1%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 I ++ + + +I +E K +F+ + G ++ Sbjct: 303 QTHARHILIKITEVMSDKEAETKIDAIKERLDNGEKFEVLARQFSEDSTASNGGDLNWVN 362 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTK 296 D P F+N + + P +Q G I + ++R + + + + K Sbjct: 363 PGDTVPPFENAMNALKDGQISAPVRSQFGWHIIQVMERRSQDMSKESARLKARQEIRARK 422 Query: 297 IEKHEAEYVKKLRSNAIIH 315 ++ +++++LR A + Sbjct: 423 ADEAYQDWIRELRDRAYVE 441 >gi|262172454|ref|ZP_06040132.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio mimicus MB-451] gi|261893530|gb|EEY39516.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio mimicus MB-451] Length = 431 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 107/313 (34%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +KL + +I + ++ + +N VI D+ + +K Sbjct: 1 MKLWKPTLISVISALTLFNAHAEPQQLDSVAVIVNSGVILQSDVDGALKTVKANAKQNNQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LI++TL++QE E+ G+ D N +N + A+N + E S + Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEAERIGVKIDDNRLNDAIKEIAKNNQQTQEQLISSV 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ F++ + + D + L E+ + + T + Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + Q++ + ++ + G ++ + ++ Sbjct: 181 IQLRVEEGQDKSEAESLANKLVGELKHGADFAQMAYTYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ + P+ + G + I D + + ++ + T ++ Sbjct: 241 IFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEG 300 Query: 301 EAEYVKKLRSNAI 313 + + + Sbjct: 301 AQKQLNEFIQRIK 313 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 34/269 (12%), Positives = 82/269 (30%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + KI+ +L VE + + +S + + Sbjct: 154 ILPAEVDTLAELLAQETDATVQYKISHIQLRVEEGQDKSEAESLANKLVGELKHGADFAQ 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I Sbjct: 214 MAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKI-HD 228 TV + I + + QK++ + + ++++ Sbjct: 274 GLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFIQRIKNGEATFGELAQQYSQDPGSA 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R++ + ALK Sbjct: 334 AQKGELGYQTPDLYVPEFKHQIEILPVGQISEPFQTVHGWHIVEVLDRREVDRTDSALKN 393 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + + ++++LR++A + Sbjct: 394 KAYRILFNRKFNEEASAWLQELRASAFVE 422 >gi|294634977|ref|ZP_06713494.1| peptidylprolyl cis-trans isomerase SurA [Edwardsiella tarda ATCC 23685] gi|291091576|gb|EFE24137.1| peptidylprolyl cis-trans isomerase SurA [Edwardsiella tarda ATCC 23685] Length = 434 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 111/311 (35%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--------NGEL 72 +++ + ++ + + ++ ++ V+ + D+ + +KL N L Sbjct: 7 LILGVVLCANTAFAAPQVVDKVVAIVDNGVVLESDVDGMMKSVKLNAQQAGQQLPDNATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ ++ Q ++ G+ + ++ A L+ + S L G+ Sbjct: 67 RHQILERLIMDNIQLQMAKRMGLEVSDSELDNAINGIAAQNHLTPQQLRSRLAADGLDYK 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L E+ A +++ + E + IP + Sbjct: 127 AYRAQIRKEMLISEVRNNEVRRRVTILPQEVDALAKQISSQNSGETAVNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 Q V + + AE + +++ + G+ + +L F + Sbjct: 187 PTQQQVSEAQQQAESLVQQLRHGADFAKLAATYSADPQALKGGEMGWGRLQELPTLFAEA 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 L + + P + G + + D R ++ ++ + +P + Sbjct: 247 LQSAKKGDIVGPIRSGVGFHILRVNDLRGDQANVAVTEVHARHILLRTSPVMSDAQARAK 306 Query: 305 VKKLRSNAIIH 315 ++ L A I Sbjct: 307 LEAL--AAQIK 315 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 35/285 (12%), Positives = 80/285 (28%), Gaps = 17/285 (5%) Query: 47 NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 N EV I ++ + Q ++ LI + + S + + Sbjct: 143 NNEVRRRVTILPQEVDALAKQISSQNSGETAVNLS-HILIPLPENPTQQQVSEAQQQAES 201 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-------FML 154 + A L+A + +G + + Sbjct: 202 LVQQLRHGADFAKLAATYSADPQALKGGEMGWGRLQELPTLFAEALQSAKKGDIVGPIRS 261 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 G + + + N+ V E R +L Q K A + + Sbjct: 262 GVGFHILRVNDLRGDQANVAVTEVHARHILLRTSPVMSDAQA-RAKLEALAAQIKSGQIT 320 Query: 215 DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAI 272 ++++ G + + S P F++ +K ++ + P + G I + Sbjct: 321 FEQAAKQYSDDPGSAQKGGDLGWAVPSMYDPAFRDALMKLNKGEISQPVHSNFGWHLIQL 380 Query: 273 CDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 R + + A K K + ++++ R+ A + Sbjct: 381 LGTRQVDRTDEAQKERAYRILFNRKFAEEAQTWLQEQRAAAYVKI 425 >gi|82701654|ref|YP_411220.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosospira multiformis ATCC 25196] gi|122070651|sp|Q2YBP3|SURA_NITMU RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|82409719|gb|ABB73828.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosospira multiformis ATCC 25196] Length = 440 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 107/308 (34%), Gaps = 17/308 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72 +L I ++ I +N VIT ++ + + + Q L Sbjct: 18 LLAGMAIAQQPAHSGVETIDHIVAVVNENVITRHELDEMLGAMLKQLQKQGVQPPPPAVL 77 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 EK ++ +I+ ++ Q ++G+T ++ + A+ +S ++F L + G+ + Sbjct: 78 EKQLLERIILNRVQLQLANETGLTVSDAELDQTLRRIAQENKMSLQEFDRALAEDGVSFS 137 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 F+ + + I + + + + E E+ + ++ + R I ++ Sbjct: 138 KFRDEIRDEIILVRLKEREVSNRVSVTEGEVDHFLETQEDSPSQSDEYRIAHILIQVSEG 197 Query: 193 QNQGFVQKRIKDAEESRLRLP---KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + + AE + +L + +F+ + G + + L +F + Sbjct: 198 ADPLKRDAARQRAESALAKLKAGTEFAQVAAEFSDAPDAMEGGLLNWRPAAQLTKKFAEI 257 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAE 303 L T + G + + ++R+ + ++ + + E Sbjct: 258 LTPMKPGEITGIIPSPNGFHILKLVERRNQDTVTTMIDQTHARHILIKISELTSEADAHR 317 Query: 304 YVKKLRSN 311 V +L+ Sbjct: 318 RVTELKER 325 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 22/167 (13%), Positives = 54/167 (32%), Gaps = 2/167 (1%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + ++ +T I ++L ++ +R+ + +E Sbjct: 269 IIPSPNGFHILKLVERRNQDTVTTMIDQTHARHILIKISELTSEADAHRRVTELKERLDN 328 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 K + + + G ++ D P+F+ + ++P + G I Sbjct: 329 GSKFEELAKLHSEDASAPTGGDLGWISPGDTVPEFEQAMSALKPGEISSPVQSPFGWHLI 388 Query: 271 AICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++R K K E E++++LR A + Y Sbjct: 389 QVIERRTQDVSQERKRQSARQAIRARKAETAFQEWLQRLRDRAYVEY 435 >gi|85711793|ref|ZP_01042849.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Idiomarina baltica OS145] gi|85694408|gb|EAQ32350.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Idiomarina baltica OS145] Length = 432 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 112/318 (35%), Gaps = 16/318 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + +K T+ + ++ CI V++ + R+ ++ VI + I + I +K + Sbjct: 1 MKQLVKFSTSVSIALMMCITATVAHAQ-QVLDRVAVIVDDGVILESQIEQLIKQVKQSEN 59 Query: 69 --------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + L A + LI + L+ Q E+ GI ++ + A++ G+S ++ Sbjct: 60 FSSANAPSDKVLRTQATERLIQQELQLQMAERMGIEVSEAQLDQAISRIAQDRGMSVDEL 119 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ---KMKNITVRE 177 G F++ + + I V + + E+ + Sbjct: 120 RENTINSGQSWPAFREQIKTEIITSQVERAAVQRRVSVTPQEVENLVNLIEQNDASPTEY 179 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 L + ++ D + Q ++R + + + +S + + G ++ Sbjct: 180 RLRQILIGVDSDAPNEKQEAAKRRAQAVIDRLEEGEDFSQLAIRSSSGSNALDGGDLGWM 239 Query: 238 LESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRD---LGGEIALKAYLSAQNT 293 E+ + F ++K + P + G + + DKR + + ++ + + Sbjct: 240 TENSMPTLFAEVVKGKSKGEIIGPIRSGVGFHILQVADKRGEQVVEVQEVKARHILIKPS 299 Query: 294 PTKIEKHEAEYVKKLRSN 311 + E + + R Sbjct: 300 VILSDNKAKEMLAQFREQ 317 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 16/136 (11%), Positives = 41/136 (30%), Gaps = 3/136 (2%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 + P L + + + E+ ++ ++ G + Sbjct: 292 RHILIKPSVILSDNKAKEMLAQFREQILSGEKTFAELAKEHSADPGSASRGGDLGWSRPD 351 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSAQNTPTKIE 298 +F+ + + + P+ TQ G + + D+R L K K Sbjct: 352 RYAEEFKQRVSTLEKGVISEPFRTQFGWHIVEVTDRRTLDATQESKRDKAYQMLFSRKYR 411 Query: 299 KHEAEYVKKLRSNAII 314 + + +++R A + Sbjct: 412 EEVDTWRQEMRDRAYV 427 >gi|37524613|ref|NP_927957.1| peptidyl-prolyl cis-trans isomerase SurA [Photorhabdus luminescens subsp. laumondii TTO1] gi|81707805|sp|Q7N8V5|SURA_PHOLL RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|36784037|emb|CAE12906.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase surA) (PPIase) (Rotamase C) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 433 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 105/304 (34%), Gaps = 16/304 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--------NGEL 72 ++ ++ + +I +N V+ + DI+ R+ +K L Sbjct: 7 LIFGLMFSVSTAFAAPQQMDKIAAVVNNGVVLESDINNRLQSVKRDAQHAGQQIPDEQTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q ++ GIT ++ A ++ + + G+ + Sbjct: 67 RHQILERLIIDNILLQMAKQMGITIPDQALDSTIANIAAQNHITVDQMKHRIAADGMNFD 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L EI A +++ N + + IP + Sbjct: 127 TYRDQIRKEMLIAEVRNNEVRRRVTILPQEIDALVKQISNQNTNDTELNISHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLRLP---KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 +Q ++K + ++ L +++ + G + +L F + Sbjct: 187 PDQAQMEKAMTVVQKIMSELKHGVDFGKLAIAYSADPQALKGGNMGWSRLQELPTLFAEQ 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 L + P + G + + D R + ++ + +P + Sbjct: 247 LQLAQKGAVVGPIRSGVGFHILKVNDIRGGNPTIAVTEVHARHILLRTSPVMTDDQARTK 306 Query: 305 VKKL 308 ++++ Sbjct: 307 LQQI 310 Score = 85.9 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 36/294 (12%), Positives = 87/294 (29%), Gaps = 26/294 (8%) Query: 43 RTTI-NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 + N EV I +I + + Q N I+ + E Sbjct: 138 IAEVRNNEVRRRVTILPQEIDALVKQISNQNTNDTELNIS-----HILIPLPENPDQAQM 192 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND----- 151 + TV + ++ + ++ + +Q + + Sbjct: 193 EKAMTVVQKIMSELKHGVDFGKLAIAYSADPQALKGGNMGWSRLQELPTLFAEQLQLAQK 252 Query: 152 ------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 G +++ + I V E R +L +Q K + A Sbjct: 253 GAVVGPIRSGVGFHILKVNDIRGGNPTIAVTEVHARHILLRTSPVMTDDQART-KLQQIA 311 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVT 263 + R + ++F+ + G + P F++ ++ ++ + P + Sbjct: 312 SDIRSGKTDFADAAKEFSDDPGSALRGGDLGWTAPDIYDPAFRDALMRLNKGEISQPVHS 371 Query: 264 QKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + D R + ++A K K + ++++ R++A + Sbjct: 372 SFGWHLIQLLDTRKVDKTDVAQKDRAYRMLFNRKFTEEAQSWMQEQRASAYVKI 425 >gi|118581988|ref|YP_903238.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelobacter propionicus DSM 2379] gi|118504698|gb|ABL01181.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelobacter propionicus DSM 2379] Length = 321 Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 95/297 (31%), Gaps = 16/297 (5%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN---------GELEKIAVQELIVETL 85 + + + +N E+IT +++ L + + + A+ L+ + L Sbjct: 17 PGKLLNAVAAIVNDEIITLYEVNHEAQPLIREGEKKGSMNDEERKRIRRAALDGLVEKKL 76 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 +Q+I++ I + +N R L E L QG+ + +K L Q Sbjct: 77 VEQKIKELNIKIGDDEINQAIDDVKRQNNLDQEGLVKALASQGLSYDQYKSQLREQLERL 136 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK-- 203 +V + + E E+ A + + R N+ +++ + Sbjct: 137 RLVSMEVRSRIQVGESEVRAYYNENLATYSEDETFRARHIFFKTNEKAPAEEIKRTMNTA 196 Query: 204 -DAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLL-KKSQNNTTNP 260 ++ G + D+ P+ + + Q + Sbjct: 197 LMVLAEAKSGKDFAELARTYSEDPAAKKDGGDLGSFKKGDMQPELEQAILGMKQGEVSEL 256 Query: 261 YVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T G I + + + ++K+ + K E+ ++ ++R+ A I Sbjct: 257 VYTPLGFHLIKLEARTPGTPKPLESVKSEIEETIYRKKSEERFKKWATEMRAKASIE 313 >gi|78222035|ref|YP_383782.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter metallireducens GS-15] gi|78193290|gb|ABB31057.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter metallireducens GS-15] Length = 339 Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 111/337 (32%), Gaps = 30/337 (8%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI-------------RTTINGEVITDGD 55 ++ F L ++ + + A +++ +NG IT + Sbjct: 1 MNVFKTARRQIIALSAIALLAGTAGANAAPTAKADAKAGEAPSATTAVARVNGVDITRAE 60 Query: 56 ISKRIALLKLQKI----------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 + + ++ + + ++E+ A+ +LI + L Q +K I + Sbjct: 61 LERAKKIILSRNQMASAAMNDEMSKKVEEAALNQLIAKELLFQAGKKQEIKDLDKKIQEK 120 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 +H A+ + L + + + + + + ++++ + + E Sbjct: 121 VAEHKARFKSQAD-YEKALKEMDMTEKEVETFTREDMVIGNLIETKIVANTKITDDEAKK 179 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR---LPKDCNKLEKF 222 K+ RE +R + ++ + +K + AE + +K Sbjct: 180 FYNDNKDKFRREEAVRASHILVSADQKASPEEKKKAKEKAEALLKQLKGGADFAELAKKE 239 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-- 279 +S G + + + P+F+ ++ TQ G I + +K+D Sbjct: 240 SSCPSSAQGGDLGFFGKGQMVPEFEKTAFNLKPGEVSDVVETQFGYHIIKLAEKKDAETV 299 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + T K++ EYV +LR + Sbjct: 300 PFEEAKERIVQFLTQQKVQAGIGEYVDELRKKGKVEI 336 >gi|309750126|gb|ADO80110.1| Putative survival protein SurA-like protein [Haemophilus influenzae R2866] Length = 313 Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 52/318 (16%), Positives = 112/318 (35%), Gaps = 20/318 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K+ + + V++ S A R+ T++G + + + + Sbjct: 1 MKMKKFVLRSFLLAALGCVAFVSMAQAEERVVATVDGIPVLESQV-------RANMGKKG 53 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI Sbjct: 54 DRQSAIDKIIDDILVQKAVQESGVKIDPREIDHVVEDTAARNGLTYGQFLDALDYQGISL 113 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI---------PANKQKMKNITVREYLIRT 182 N F+Q +A Q + V E+ A ++ + Sbjct: 114 NAFRQQIANQMMMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVTGKEYEVR 173 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY-LLES 240 + + L + ++ K + + K++ + G Y E+ Sbjct: 174 HILLKLNPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 233 Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEK 299 Q ++K Q + P+ T+ G + + RD + T+++ Sbjct: 234 YAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGTRDGDLTSEAYTQKAYERLVNTQLQD 293 Query: 300 HEAEYVKKLRSNAIIHYY 317 ++VK LR A I Y+ Sbjct: 294 ATNDWVKALRKRANIQYF 311 >gi|90580797|ref|ZP_01236600.1| putative survival protein SurA [Vibrio angustum S14] gi|90438065|gb|EAS63253.1| putative survival protein SurA [Vibrio angustum S14] Length = 433 Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 119/314 (37%), Gaps = 15/314 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK----- 67 +K + ++ + S + ++ T+N VI D+S + ++L Sbjct: 1 MKTWKYSVLSLMMMGMSATSMAAPQELDQVVMTVNDGVILQSDVSAMLKTVRLNAAEEHQ 60 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 N L + + +LI+E L+ Q+ ++ GI D + ++ A+ +S + L Sbjct: 61 QLPPNNILRQQVMDQLILENLQIQQAQQLGIRIDDSQLDQAIADVAKQRNMSVDQLRQSL 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 K G+ + F++ + + + + L E+ + ++M T + Sbjct: 121 AKAGVSYSMFREQMRNDMLASEARTIIVRKRVNVLPQEVESLAKQMAEQTQQNVQYNISQ 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I ++ ++ K ++AE+ + +++ + G+ ++ +++ Sbjct: 181 IQIRVDEDADKAERDKAKQEAEDIVAQLKKGANFSQLAYRYSKGPKALKGGEWGWMSKAE 240 Query: 242 LHPQFQNLLKKSQNN-TTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297 + F + ++ + + P+ + G + I D + + ++ + + Sbjct: 241 MPTVFADQIQNNGKDAIIGPFRSGVGYHILKINDVKGMPSVSVVEVKARHILIKPSMILS 300 Query: 298 EKHEAEYVKKLRSN 311 + ++K+R + Sbjct: 301 DAAAKAELEKIRQS 314 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 25/264 (9%), Positives = 83/264 (31%), Gaps = 4/264 (1%) Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 ++K++A Q + + +I ++ +++ K + Sbjct: 162 LAKQMAEQTQQNVQYNISQIQIRVDEDADKAERDKAKQEAEDIVAQLKKGANFSQLAYRY 221 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 S + + G + I + + I +V Sbjct: 222 SKGPKALKGGEWGWMSKAEMPTVFADQIQNNGKDAIIGPFRSGVGYHILKINDVKGMPSV 281 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK-DCNKLEKFASKI-HDVSIGK 233 ++ I + + + + ++ +S + + + ++ + G+ Sbjct: 282 SVVEVKARHILIKPSMILSDAAAKAELEKIRQSIISGKQTFAAAAKAYSEDPGSAANGGQ 341 Query: 234 AQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQ 291 + + P F++ ++ + + P+ + G + + +R + + A+K + Sbjct: 342 LGWQVPDMYAPAFKDKVETLPVDKISEPFKSTFGWHIVEVEGRRKVDRTDAAMKNRAAQI 401 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIH 315 K + ++++LR+ A I Sbjct: 402 IFNRKFNEEAQTWLQELRAGAYIE 425 >gi|49474098|ref|YP_032140.1| hypothetical protein BQ04600 [Bartonella quintana str. Toulouse] gi|49239602|emb|CAF25959.1| hypothetical protein BQ04600 [Bartonella quintana str. Toulouse] Length = 324 Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 75/317 (23%), Positives = 125/317 (39%), Gaps = 9/317 (2%) Query: 7 TSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL 62 T ++ F K + F + +V + I T+NG IT+ DI +R A Sbjct: 5 TYMNKFKKRILALFCIAPLSVSNLLVSGFLISPVFAQTVIVVTVNGNPITNYDIQRRTAF 64 Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 LKLQ+ G L A ELI E +K EI++ I N V F A ++ + + Sbjct: 65 LKLQQKQGNLAAQAKNELINEIVKNTEIKRRNIEVSDNEVESAFENFAMQNNMTVDQLNQ 124 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 L + I HFK Y+ Q W +V + + G + + + T Sbjct: 125 ILMQNDITVQHFKDYIRGQIGWGRLVNARYQAEIGMVSEQEAVRRILKNGGVKPSTNEYT 184 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + I + + +R + +S + C +K A I DV+I LE L Sbjct: 185 LQQIIFVIPEHRRSEILERRQREAKSFRAHFQGCANAQKQARGILDVTIRHLGKFLEPQL 244 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS----AQNTPTKI 297 ++ Q + T T G+E +A+C + + + + S + +P K+ Sbjct: 245 PREWGQAVRATPVGKMTQLRETTDGIEALAVCKIKRVSDDYVARLIFSLQDNKEKSPQKL 304 Query: 298 EKHEAEYVKKLRSNAII 314 E +Y+K+LR A I Sbjct: 305 EILSEKYLKELRQAAHI 321 >gi|122070641|sp|Q145L3|SURA_BURXL RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor Length = 450 Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 99/314 (31%), Gaps = 22/314 (7%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-------- 71 F+ + +S I +N VIT ++ +R+ L+ + Sbjct: 19 FLSVAPVQAQALSGSGGQTVDTIAAVVNNGVITRRELDERMGLITRRLNQQNAPVPPMDQ 78 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L + + ++++E ++ Q+ ++ GIT D TV + A L+ + + S ++ QG+ Sbjct: 79 LRQQVLNQMVLERIQLQKAKEDGITIDDATVQKTLERLAAANNLTLDVYRSRIEAQGVPW 138 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 F + + + + K + E+ + + Sbjct: 139 TTFTSDARTELTLSRLREKEVDSKVTVSDAEVANYIASQRGPNAGLTSDLHLQHIFLKAP 198 Query: 192 ----LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + Q++ + + + G ++ S L P+F Sbjct: 199 LNASETDIEAAQRKAQALLAEAKGGANFEKLAKSNSQAPDASKGGDTGFVSPSKLPPEFV 258 Query: 248 NLLKKSQNNTTNP--YVTQKGVEYIAICDKRDLGGE--------IALKAYLSAQNTPTKI 297 + NP T G E + + D+R G ++ + Sbjct: 259 KAASALRPGEVNPDLIRTSDGFEIVRLVDRRAGQGTSSDAPKLVQTHVRHILLRVGDGMS 318 Query: 298 EKHEAEYVKKLRSN 311 E + + ++++ Sbjct: 319 EPQARQKLLEIKNE 332 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 15/145 (10%), Positives = 49/145 (33%), Gaps = 2/145 (1%) Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + + ++ ++++ + + ++ G Sbjct: 297 DAPKLVQTHVRHILLRVGDGMSEPQARQKLLEIKNEIAAGGDFAKFAHTYSQDGSSSQGG 356 Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSA 290 ++ + P+F+ + ++P ++ G I + +R+ G +A + Sbjct: 357 DLGWISPGETVPEFERAMNSLQDGQISDPVRSEYGYHLIQVLGRRESEGSVAQQMDLARQ 416 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIH 315 K E+ A+++++LR A + Sbjct: 417 AIGQRKAEQAYADWLRELRDTAYVE 441 >gi|315635080|ref|ZP_07890360.1| peptidyl-prolyl cis-trans isomerase [Aggregatibacter segnis ATCC 33393] gi|315476201|gb|EFU66953.1| peptidyl-prolyl cis-trans isomerase [Aggregatibacter segnis ATCC 33393] Length = 307 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 103/310 (33%), Gaps = 20/310 (6%) Query: 20 FVLIIFCIVPIVSY-KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78 ++F + +++ + ++ T+NG + + + + + A+ Sbjct: 3 LKSVLFVALGFLAFIANAQAEEKVVATVNGVPVLESQVKSAL-------TKKSNRQAALD 55 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 ++I + L Q +++SG++ ++ V+ A GL+ LD QGI ++Q + Sbjct: 56 KVIDDILVAQAVKESGVSVNNAQVDQIIEGIAAQNGLTFGQLLDALDYQGISYAAYRQQI 115 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPA---------NKQKMKNITVREYLIRTVLFSIPD 189 A Q + +V ++ A + + + Sbjct: 116 AQQLMMSEVRNRAISQSVDVSREQVEALAKKMLAEAKAKGNVAKLTDTQYEVRHILLKLN 175 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY-LLESDLHPQFQ 247 L + + + + + K++ + G Y E + P + Sbjct: 176 PLLNDAQAKAQLEQIRADILAGKTTFADAALKYSKDYLSGANGGSLGYAFPEMYVGPFNK 235 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVK 306 + Q + P+ T+ G + + + R Q +++ ++V+ Sbjct: 236 AVRTTKQGVISAPFKTEFGWHILEVTNTRQADRTEDAYRQKAYEQIVNQQLQDSARDWVQ 295 Query: 307 KLRSNAIIHY 316 LR A I Y Sbjct: 296 ALRKRANIKY 305 >gi|107099580|ref|ZP_01363498.1| hypothetical protein PaerPA_01000593 [Pseudomonas aeruginosa PACS2] gi|313111760|ref|ZP_07797553.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa 39016] gi|310884055|gb|EFQ42649.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa 39016] Length = 404 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 36/289 (12%), Positives = 98/289 (33%), Gaps = 15/289 (5%) Query: 40 SRIRTTINGEVITDGDISKRIALLKL--------QKINGELEKIAVQELIVETLKKQEIE 91 R+ ++ +VI + +R+ + L + ++ LI+E +++Q + Sbjct: 5 DRVVAIVDNDVIMQSQLDQRLREVHQTLLKRGAPLPPEHVLTQQVLERLIIENIQQQIGD 64 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 +SGI +N A+ G+S E F + L + G+ ++ + + + V + Sbjct: 65 RSGIRISDEELNQAMGTIAQRNGMSLEQFQAALTRDGLSYADAREQVRREMVISRVRQRR 124 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIR---TVLFSIPDNKLQNQGFVQKRIKDAEES 208 + E E+ R ++ ++ ++ + Sbjct: 125 VAERIQVSEQEVKNFLASDMGKIQLSEEYRLANILIPVPEAASSDVIQAAARQAQELYQQ 184 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 + ++ + + G+ + + L F +++ + + T P T G Sbjct: 185 LKQGADFGQLAISRSAGDNALEGGEIGWRKAAQLPQPFDSMIGSLAVGDVTEPVRTPGGF 244 Query: 268 EYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + +KR + ++ + + + E + +KL Sbjct: 245 IILKLEEKRGGSKMVRDEVHVRHILLKPSEIRSEAETEKLAQKLYERIQ 293 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 15/139 (10%), Positives = 49/139 (35%), Gaps = 3/139 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 + ++++++ +K + E + F+ ++ G ++ Sbjct: 264 HVRHILLKPSEIRSEAETEKLAQKLYERIQSGEDFGELAKSFSEDPGSALNGGDLNWIDP 323 Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKI 297 L P+F+ + Q + P+ +Q G + + +R + + K Sbjct: 324 EALVPEFRQVMNDTPQGELSKPFRSQFGWHILQVLGRRATDSSEKFREQQAVSVLRNRKY 383 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ +++++R A + Sbjct: 384 DEELQAWLRQIRDEAYVEI 402 >gi|319775614|ref|YP_004138102.1| survival protein SurA [Haemophilus influenzae F3047] gi|317450205|emb|CBY86421.1| survival protein SurA homolog [Haemophilus influenzae F3047] Length = 311 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 114/316 (36%), Gaps = 20/316 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 + + + V++ S A + R+ T++G I + + + Sbjct: 1 MKKFVLRSFLLAALGCVAFASMAQAGERVVATVDGIPILESQV-------RANMGKKGDR 53 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNT 113 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEI----------PANKQKMKNITVREYLIRTV 183 F+Q +A Q + V E+ K + + +EY +R + Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY-LLESDL 242 L + Q Q ++ + L+ + + G Y E+ Sbjct: 174 LLKLNPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPETYA 233 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHE 301 Q ++K Q + P+ T+ G + + RD + T+++ Sbjct: 234 PQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRDGDLTAEAYTQKAYERLVNTQLQDAT 293 Query: 302 AEYVKKLRSNAIIHYY 317 ++VK LR A I Y+ Sbjct: 294 NDWVKALRKRANIQYF 309 >gi|218665253|ref|YP_002427402.1| survival protein SurA [Acidithiobacillus ferrooxidans ATCC 23270] gi|218517466|gb|ACK78052.1| survival protein SurA [Acidithiobacillus ferrooxidans ATCC 23270] Length = 436 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 35/290 (12%), Positives = 101/290 (34%), Gaps = 13/290 (4%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---------LEKIAVQELIVET 84 ++ ++ +N +IT + +R+ ++ + L + +Q++I++ Sbjct: 25 QNTQNLDKVVAVVNDNIITSMQLEQRVGAVRARLQTQNPNAMPPEDILRRQVLQQMILQD 84 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 ++ Q ++GI D T++ A+ L+ + L QG F L + + Sbjct: 85 IELQIAHRAGIKVDKATLDQAISNLAQANHLTPDQLRQALANQGQSWERFTHDLEDRILV 144 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 +++ + + E+ Q++K + + ++ + +PDN + +R + Sbjct: 145 DRLMQQEVENRVHIGPDEVKTFAQQLKEMGGVSFDLQQIFIPLPDNPTPDAVGAARRDAE 204 Query: 205 A-EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYV 262 + L + + +S + G+ ++ +L P L+ + Sbjct: 205 QARDHVLAGERFGRVATQVSSGRDALQGGRLGWIKAGELPPAVAQTLLQLKVGEISPVIP 264 Query: 263 TQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 G + D + A + + + + + ++ Sbjct: 265 GPTGFHIFKLLDVKHGQPTVTEVKTAMIVLRAGNSLQLQEAEARAQDIQQ 314 Score = 68.9 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 13/123 (10%), Positives = 39/123 (31%), Gaps = 3/123 (2%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKS 253 + R +D +++ + ++ + G+ ++ L + L Sbjct: 303 QEAEARAQDIQQALQSGTRFSELARSYSQDPRTAANGGEMGWVAPGQLPDSLERTLLTLQ 362 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEI-ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 ++P + + +R E + A Q + + E+ +++R A Sbjct: 363 PGGVSSPIRVGNAIYILHSQAQRQQAVEEKQIMAAARMQLYNRIVHERMDEWQRRIRDGA 422 Query: 313 IIH 315 + Sbjct: 423 YVE 425 >gi|85858737|ref|YP_460939.1| peptidyl-prolyl cis-trans isomerase [Syntrophus aciditrophicus SB] gi|85721828|gb|ABC76771.1| peptidyl-prolyl cis-trans isomerase [Syntrophus aciditrophicus SB] Length = 322 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 114/321 (35%), Gaps = 18/321 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 +K L + L++ ++ + + RI +N E+IT +++ + + + Sbjct: 1 MKKLQIFTFLLLSVLMATL-QARAEIVDRIVAFVNDEIITLHELNTAFEPYRKKIDDSYK 59 Query: 71 ---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 E + +I L +QE +KS I V + + + F Sbjct: 60 GTDKDRIMSETRLTLLNRMIDNLLIEQEAKKSAIAVSDEEVMASIRDNLARRKTTMDAFQ 119 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK--QKMKNITVREYL 179 L ++G +K+ + + +++ + K + EI + + Sbjct: 120 QSLAREGTNFEDYKKEMRDSMVRTRLLRREVRSKVTVNDEEIGEYYRLHREEYEGKDAVK 179 Query: 180 IRTVLFSIPDNKLQN-QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 ++ +L P N +N + +Q + + + +F+ G ++ Sbjct: 180 LKHILLLFPGNMDENAKAKLQADAMEILKRLRMGESFDSLAARFSQGPAASDGGNVGFVE 239 Query: 239 ES-DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPT 295 + L + ++ ++ + G I + D+R ++A + ++ Sbjct: 240 KGAMLPEVEKAAFSLDRDKISDLIESPVGFHIIKVIDRRGPGLKPIEEVRAEIKSRLEDG 299 Query: 296 KIEKHEAEYVKKLRSNAIIHY 316 KIEK ++ +LR+ +++ Sbjct: 300 KIEKKFDSWISELRAKSLVEI 320 >gi|296161011|ref|ZP_06843822.1| SurA domain protein [Burkholderia sp. Ch1-1] gi|295888710|gb|EFG68517.1| SurA domain protein [Burkholderia sp. Ch1-1] Length = 453 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 100/314 (31%), Gaps = 22/314 (7%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-------- 71 F+ + +S S I +N VIT ++ +R+ L+ + Sbjct: 22 FLSVAPVQAQALSGSSGQTVDTIAAVVNNGVITRRELDERMGLITRRLNQQNAPVPPMDQ 81 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L + + ++++E ++ Q+ ++ GI D TV + A L+ + + S ++ QG+ Sbjct: 82 LRQQVLNQMVLERIQLQKAKEDGINIDDATVQKTLERLAAANNLTLDVYRSRIEAQGVPW 141 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + F + + + + K + E+ + + Sbjct: 142 STFTSDARTELTLSRLREKEVDSKVTVSDAEVANYIASQRGPNAGLTSDLHLQHIFLKAP 201 Query: 192 ----LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + Q++ + + + G ++ S L P+F Sbjct: 202 LNASETDIEAAQRKAQALLAEAKGGANFEKLAKSNSQAPDASKGGDTGFVSPSKLPPEFV 261 Query: 248 NLLKKSQNNTTNP--YVTQKGVEYIAICDKRDLGGE--------IALKAYLSAQNTPTKI 297 + NP T G E + + D+R G ++ + Sbjct: 262 KAASTLRPGEINPDLIRTNDGFEIVRLVDRRTGQGTSSDAPKLVQTHVRHILLRVGDGMS 321 Query: 298 EKHEAEYVKKLRSN 311 E + + ++++ Sbjct: 322 EPQARQKLLEIKNE 335 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 15/145 (10%), Positives = 49/145 (33%), Gaps = 2/145 (1%) Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + + ++ ++++ + + ++ G Sbjct: 300 DAPKLVQTHVRHILLRVGDGMSEPQARQKLLEIKNEIAAGGDFAKFAHTYSQDGSSSQGG 359 Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSA 290 ++ + P+F+ + ++P ++ G I + +R+ G +A + Sbjct: 360 DLGWISPGETVPEFERAMNSLQDGQISDPVRSEYGYHLIQVLGRRESEGSVAQQMDLARQ 419 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIH 315 K E+ A+++++LR A + Sbjct: 420 AIGQRKAEQAYADWLRELRDTAYVE 444 >gi|108760198|ref|YP_628739.1| putative foldase protein PrsA [Myxococcus xanthus DK 1622] gi|108464078|gb|ABF89263.1| putative foldase protein PrsA [Myxococcus xanthus DK 1622] Length = 349 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 33/314 (10%), Positives = 97/314 (30%), Gaps = 25/314 (7%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSR---IRTTINGEVITDGDISKRI--------ALLK 64 + + V + + M + + ++NGEV++ D + + + Sbjct: 26 FLVPLAIALAAGVGMPACTKPVMETPEALVVASVNGEVLSRADFEQELWRELALTDVSQR 85 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + ++ + I L QE K +T V+ ++ + A +F+ L Sbjct: 86 TLEDVEPFKRALLDTYIHRMLLLQEARKHNVTVTPEEVDRGVLRL--SGDYPAGNFNEVL 143 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + + + A + + + + E E+ A + + Sbjct: 144 AQGQLSMAELRSREASRLTIEKLFASHVYSRVAVTEEELRAWYGAHEKDFHEPEQVHAAQ 203 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + Q + K + +++ G + + P Sbjct: 204 IVVKGLDEARRLQTQLK---------SGKKFADLARRYSLSADAKVGGDLGFFPRGQMPP 254 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHE 301 F + + K ++ T+ G + +++ + +++ + + K + + Sbjct: 255 AFDEVVFKLGVGQVSDVVSTEYGFHLFRVLERKPARKREFVEVRSLVEGKLLEQKRSQAQ 314 Query: 302 AEYVKKLRSNAIIH 315 + ++LR A + Sbjct: 315 ETFEQELRQKAQVQ 328 >gi|301169179|emb|CBW28776.1| survival protein SurA homolog [Haemophilus influenzae 10810] Length = 311 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 114/316 (36%), Gaps = 20/316 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 + + + V++ S A + R+ T++G I + + + Sbjct: 1 MKKFVLRSFLLAALGCVAFASMAQAGERVVATVDGIPILESQV-------RANMGKKGDR 53 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNT 113 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEI----------PANKQKMKNITVREYLIRTV 183 F+Q +A Q + V E+ K + + +EY +R + Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY-LLESDL 242 L + Q Q ++ + L+ + + G Y E+ Sbjct: 174 LLKLNPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPETYA 233 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHE 301 Q ++K Q + P+ T+ G + + RD + T+++ Sbjct: 234 PQFAQTVMKSKQGVISAPFKTEFGWHILEVTGVRDGDLTAEAYTQKAYERLVNTQLQDAT 293 Query: 302 AEYVKKLRSNAIIHYY 317 ++VK LR A I Y+ Sbjct: 294 NDWVKALRKRANIQYF 309 >gi|91781822|ref|YP_557028.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia xenovorans LB400] gi|91685776|gb|ABE28976.1| Putative peptidyl-prolyl cis-trans isomerase [Burkholderia xenovorans LB400] Length = 453 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 99/314 (31%), Gaps = 22/314 (7%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-------- 71 F+ + +S I +N VIT ++ +R+ L+ + Sbjct: 22 FLSVAPVQAQALSGSGGQTVDTIAAVVNNGVITRRELDERMGLITRRLNQQNAPVPPMDQ 81 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L + + ++++E ++ Q+ ++ GIT D TV + A L+ + + S ++ QG+ Sbjct: 82 LRQQVLNQMVLERIQLQKAKEDGITIDDATVQKTLERLAAANNLTLDVYRSRIEAQGVPW 141 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 F + + + + K + E+ + + Sbjct: 142 TTFTSDARTELTLSRLREKEVDSKVTVSDAEVANYIASQRGPNAGLTSDLHLQHIFLKAP 201 Query: 192 ----LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + Q++ + + + G ++ S L P+F Sbjct: 202 LNASETDIEAAQRKAQALLAEAKGGANFEKLAKSNSQAPDASKGGDTGFVSPSKLPPEFV 261 Query: 248 NLLKKSQNNTTNP--YVTQKGVEYIAICDKRDLGGE--------IALKAYLSAQNTPTKI 297 + NP T G E + + D+R G ++ + Sbjct: 262 KAASALRPGEVNPDLIRTSDGFEIVRLVDRRAGQGTSSDAPKLVQTHVRHILLRVGDGMS 321 Query: 298 EKHEAEYVKKLRSN 311 E + + ++++ Sbjct: 322 EPQARQKLLEIKNE 335 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 15/145 (10%), Positives = 49/145 (33%), Gaps = 2/145 (1%) Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + + ++ ++++ + + ++ G Sbjct: 300 DAPKLVQTHVRHILLRVGDGMSEPQARQKLLEIKNEIAAGGDFAKFAHTYSQDGSSSQGG 359 Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSA 290 ++ + P+F+ + ++P ++ G I + +R+ G +A + Sbjct: 360 DLGWISPGETVPEFERAMNSLQDGQISDPVRSEYGYHLIQVLGRRESEGSVAQQMDLARQ 419 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIH 315 K E+ A+++++LR A + Sbjct: 420 AIGQRKAEQAYADWLRELRDTAYVE 444 >gi|260912727|ref|ZP_05919213.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Pasteurella dagmatis ATCC 43325] gi|260633105|gb|EEX51270.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Pasteurella dagmatis ATCC 43325] Length = 311 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 121/318 (38%), Gaps = 20/318 (6%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K L + + +S + A + R+ T+NG + + + K Sbjct: 1 MMKTLNIKSIFFALVGLFAISTTTQA-AERVVATVNGIPVLESQV-------KANSGKKG 52 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + A+ + I + L +Q I+ SG+ + V+ A GL+ F LD QGI Sbjct: 53 NRQAALDKAIDDILVQQAIQNSGVKVNYAQVDQIIEGIAAQNGLTYGQFLDALDYQGISY 112 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP----------ANKQKMKNITVREYLIR 181 N ++Q +A Q + +V ++ K K ++ ++Y +R Sbjct: 113 NTYRQQIANQLLMTEVRNQAIGQSIDVTREQVEALGKQLLQEAKEKGTEKKVSGKQYEVR 172 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY-LLES 240 +L + Q Q A+ ++ L+ + + G + E+ Sbjct: 173 HILLKLNPLLNDTQAKAQLSQIRADIMAGKMTFADAALKYSKDYLSGANGGSLGFAFPET 232 Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK 299 + P + ++ Q + P+ T+ G + + + RD + + Q ++++ Sbjct: 233 YVGPFQKTVITSKQGVISAPFKTEFGWHILEVTNTRDGDRTLDAYRQQAYEQLINSQVKD 292 Query: 300 HEAEYVKKLRSNAIIHYY 317 E ++VK LR NA I Y+ Sbjct: 293 AEKDWVKALRKNADIQYF 310 >gi|319408317|emb|CBI81970.1| conserved exported hypothetical protein [Bartonella schoenbuchensis R1] Length = 308 Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 71/301 (23%), Positives = 127/301 (42%), Gaps = 5/301 (1%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 +L + S + + T+NG IT+ DI +RIA LKLQ+ G+L A EL Sbjct: 1 MLGVSSFTGAFFISSVFAQTTVAITVNGNPITNYDIQRRIAFLKLQQKQGDLSAQARNEL 60 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I E LK EI++ I N +N F A ++ + S L++ + + HFK Y++ Sbjct: 61 IDEMLKNIEIQRLNIDVSDNEINSAFANFAEQNNMTVDQLSEMLNQTEVTEEHFKAYISG 120 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q W +V + + G L + A++ T+ I + + Sbjct: 121 QMGWGRLVNARYQSEDGYLSEQEAAHRILKNGGIKPSTNEYTLQQIIFVIPAHRRAELLT 180 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN 259 + + + C+ +K I DV++ LE L ++ ++ + T Sbjct: 181 KRTQEINNFRAHFRGCDNTKKQTRGILDVTVRNLGKFLEPQLPTDWEQAIRATPAGKMTQ 240 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP----TKIEKHEAEYVKKLRSNAIIH 315 P+ T G+E +A+C + + + + S Q++ K+E +Y+K+LR A I Sbjct: 241 PHETPYGIEALAVCQIKKVSDDRVAQLMFSIQDSQKRTPQKLEALSEKYLKELRQRAHIQ 300 Query: 316 Y 316 Sbjct: 301 N 301 >gi|239906716|ref|YP_002953457.1| putative peptidyl-prolyl cis-trans isomerase [Desulfovibrio magneticus RS-1] gi|239796582|dbj|BAH75571.1| putative peptidyl-prolyl cis-trans isomerase [Desulfovibrio magneticus RS-1] Length = 371 Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 112/335 (33%), Gaps = 32/335 (9%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + D + + +F ++ + + R+ +NG++IT D++ R+A + Q Sbjct: 38 MEDTLPQIAKFFGVLALLASLATPAGAAELVDRVVAVVNGKLITLFDVNTRVADMVKQTQ 97 Query: 69 N----------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 +L + ++ +I + L + E K +T ++ + + LS + Sbjct: 98 GVALKPDDPRLDDLRRQVLESMITDMLIESEANKLKVTVSDTEIDSQIEEIKKKNNLSQQ 157 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV--R 176 F + L K+G+ F+ + + SI ++ K + EI +K K + Sbjct: 158 QFVTELAKEGLTLKQFRDKMRLDSIKKRLLGFMVHRKVLVTDDEIRDYYEKNKGSLSAAK 217 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 L V + + N+ ++ + + +KF+ G Sbjct: 218 SVLGPKVSGGLGFIMVPNKKQAEELRDRINSGSMSF---ADAAKKFSIGPGRDQGGDLGD 274 Query: 237 LLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL---------------GG 280 + DL P L + P + G + + Sbjct: 275 VQIKDLAPPLRSALTAVPPGQVSEPVLLD-GKAVLLVQRTASAPAEKPAAPAAAAGSNPS 333 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 A K + K +K EY+ LRS A++ Sbjct: 334 YEAAKEQIQELLYKQKFDKLFQEYIDNLRSKAVVE 368 >gi|322434749|ref|YP_004216961.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidobacterium sp. MP5ACTX9] gi|321162476|gb|ADW68181.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidobacterium sp. MP5ACTX9] Length = 672 Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 38/284 (13%), Positives = 99/284 (34%), Gaps = 14/284 (4%) Query: 47 NGEVITDGDISKRIALLKLQKINGEL--------EKIAVQELIVETLKKQEIEKSGITFD 98 N ++I+ D+ + L+ + L +K ++++I + L + ++ G+ D Sbjct: 79 NDQIISRSDVDRSEEQLEQESAQQNLSPADLASRQKDMLRDMIDQQLLLSKAKELGLNAD 138 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 + + +N S +D +QG+ FK + Q + VV+++ + Sbjct: 139 AEVIRRLDDIRKQNKLDSMDDLEKAARQQGVSFEDFKAQIRNQILTQQVVRDEVGRRLQT 198 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE---ESRLRLPKD 215 + E + K + +R +P + +++ A ++ Sbjct: 199 TQAEQAKYYEAHKKDFEQPEQVRLSEILVPLPDTASPAEIEQAETKANGLKSELMKGGDF 258 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICD 274 +K + G+ L ++ + +T P T++G + + + Sbjct: 259 AEVAKKNSGGPTAAQGGELGLFKRGALAKVIEDQTFALAPGESTQPIRTRQGFVILKVNE 318 Query: 275 KRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ ++ + ++ Y+ KLR NA + Sbjct: 319 HQEPGAAPMKDVEPQIQEALYMNAMQPALRAYLTKLRENAYVDI 362 >gi|90419499|ref|ZP_01227409.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90336436|gb|EAS50177.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 346 Score = 129 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 5/305 (1%) Query: 14 KLLTTYFVLIIFCIVPIVSYK-SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 + FVL + + S +S I+ +NG IT I +R A L+L+++ G Sbjct: 40 RRAALAFVLAGSAAATLPATTVSVQAASEIKAVVNGMPITSYQIRQRAAFLQLRRVGGNA 99 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + A ELI E LKKQEI + GI V+ F + A L+ E L + G + Sbjct: 100 TQKATDELIDEALKKQEIGRRGIAIPDEAVDEAFGRFAAENKLTREQLGQVLSRAGFSSD 159 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 FK Y+ +Q W V+ + E ++ Sbjct: 160 GFKDYIRVQMGWGQAVQANMRSTERLSEQDVVQRMLAQGGEKPSTTEYTLQQVIFVIPDA 219 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 Q + +R ++AE R R + +FA + DV++ + + +L P+++ ++ Sbjct: 220 QRSALMAQRKREAESMRSRFQSCESTY-EFAKGLRDVTVRDLGRVAQPELPPRWKKDIQA 278 Query: 253 SQNNTTNPYV-TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLR 309 + T P T++GVE+IA+C+ R++ + A A+ E+ E A Y+KKLR Sbjct: 279 TSVGRTTPAQATERGVEFIAVCNTRNISDDKAAALVFQAREMEKLGEQAEPDAAYLKKLR 338 Query: 310 SNAII 314 A I Sbjct: 339 DRAQI 343 >gi|94264357|ref|ZP_01288149.1| PpiC-type peptidyl-prolyl cis-trans isomerase [delta proteobacterium MLMS-1] gi|93455251|gb|EAT05464.1| PpiC-type peptidyl-prolyl cis-trans isomerase [delta proteobacterium MLMS-1] Length = 335 Score = 129 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 109/294 (37%), Gaps = 19/294 (6%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKING-----------ELEKIAVQELIVETLKKQ 88 R+ +NGE+IT ++ + +A ++ Q + E + + +I L +Q Sbjct: 38 DRVVAEVNGEIITMSELEREMAGVEQQVLQQAPAADREQVLAEARQQVLSGMIDRLLARQ 97 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 + ++ GI V+ Q + ++ E+ + + + ++++ L Q + ++ Sbjct: 98 QADRLGIRVGEREVDEAIAQILADNRITMEELEAEIARHHGSMENYRRDLQTQILQSRLL 157 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + E I Q+ +L + + ++ + AEE Sbjct: 158 SLEVRERVVIPERRIKEYYQQHHQEQTSPEEAYHILQIGFNWPPGDDEAREQARRQAEEI 217 Query: 209 RLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQ 264 + + + +++ + G + +L +++ + + T Sbjct: 218 HRQARQGADFRELARRYSDLPSARNDGDLGVFQKDELAGIMLEHIPELEPGEISTILETA 277 Query: 265 KGVEYIAIC----DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 G ++ + + R G LK + + +E+ +++VK+LR NA I Sbjct: 278 AGYQFFKLLSNQGELRATGSYEELKGKIREKLYQQALEEQFSKWVKELRENAYI 331 >gi|323700040|ref|ZP_08111952.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio sp. ND132] gi|323459972|gb|EGB15837.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio desulfuricans ND132] Length = 633 Score = 129 bits (322), Expect = 8e-28, Method: Composition-based stats. Identities = 49/402 (12%), Positives = 102/402 (25%), Gaps = 96/402 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + S +I + ++I+F +S + + T+NG+ IT + Sbjct: 1 MLEVMRENASGWIVKILFAIIIIVFVFAFGMSGLN-SSGDPTVATVNGQAITRAEYEAMY 59 Query: 61 ALL------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF-- 106 Q + E +++ + ELI + L E K GI V Sbjct: 60 QRAAENLRRTNPDLPPAQTRSPEFKQMVLGELISQKLLLGEAAKLGIRASDKEVAAGIGA 119 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN-------------- 150 N + + + L + F++ V Sbjct: 120 VDAFKDANGNFDQQRYQTALRDIRMTPGDFEENYRRDLTMEKVKDAVGVPADLSESQARQ 179 Query: 151 -------------------DFMLKYGNLEMEIPANKQKMKNITV---------------- 175 DF + E EI A Q ++ Sbjct: 180 IFDWLGETAAIDYIEVLPTDFRNEIKIGETEIEAYYQANQDRFQIPAQVTLRTLAFTPAS 239 Query: 176 ------------------------REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + + +Q +K ++ Sbjct: 240 LAKFQTVTDDEIKAYYAANKDSLEEPAQVHARHILVAVKESDSQADQEKAKARIDKLYQE 299 Query: 212 ---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 +K + + G + + + P F+ ++ + P TQ G Sbjct: 300 AKAGADFAELAKKNSDGPSAPNGGDLGWFGKGAMIPDFEKAAFALNKGGVSEPVRTQFGW 359 Query: 268 EYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 I + DK++ K + A+ K + + + Sbjct: 360 HIIMVEDKKEGTTKTFDEAKDEIKARLAEEKASDQANDLLDQ 401 >gi|253998290|ref|YP_003050353.1| SurA domain-containing protein [Methylovorus sp. SIP3-4] gi|253984969|gb|ACT49826.1| SurA domain protein [Methylovorus sp. SIP3-4] Length = 438 Score = 129 bits (322), Expect = 8e-28, Method: Composition-based stats. Identities = 39/321 (12%), Positives = 111/321 (34%), Gaps = 16/321 (4%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 T + + + + +I + S RI ++ V+T+ +++ RI ++ Sbjct: 1 MTIKNCLMAGVFLWLGALIPHVASAAQDGSVNKIDRIVAVVDQGVVTEKELNDRIEIVSA 60 Query: 66 QKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 Q LEK ++ LI + L+ Q ++G+ D + ++ ++ A + Sbjct: 61 QLEKQGNQLPPRNVLEKQILERLINDRLQLQYAAQTGLRVDDDQLDKTIMRIAEQNKMGV 120 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 +F L +GI F++ + + + + + + + E E+ + Sbjct: 121 PEFKEALAAEGIVYKKFREDIRNEILLARLREREVDNRVNVTESEVDNFLTTQSSRQDSS 180 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL---EKFASKIHDVSIGKA 234 I + + +++ + AE++ +L + + + + + GK Sbjct: 181 DEYEISHILIRAPEDGSPEDLKRLREKAEDALKKLQAGEDFGQVSARVSDAPNALEGGKL 240 Query: 235 QYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLS 289 + + + F + L + + G + + D+R + ++ Sbjct: 241 GWKTAAQVPALFLEALKPMQVGQLSGILRSPNGFHILKLTDRRGGNTSTMVQQTHTRHIL 300 Query: 290 AQNTPTKIEKHEAEYVKKLRS 310 + + E + ++ Sbjct: 301 IKTSEVLSETEAKRKIDGIKQ 321 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 16/144 (11%), Positives = 53/144 (36%), Gaps = 2/144 (1%) Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 + T I +++ ++ +++I ++ +++++ + G Sbjct: 288 STMVQQTHTRHILIKTSEVLSETEAKRKIDGIKQLIDNGEDFGEAAKRYSNDGSAANGGD 347 Query: 234 AQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQ 291 ++ D PQF+ + ++ + G I + ++R+ + + Sbjct: 348 LGWVNPGDTVPQFEKAMNALQPGQISDAVRSPFGWHLIQVLERRNQDMTREAERMKARQE 407 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIH 315 K ++ ++V++LR A + Sbjct: 408 IRQRKADEAYQDWVRELRDRAYVE 431 >gi|258593267|emb|CBE69606.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [NC10 bacterium 'Dutch sediment'] Length = 351 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 113/317 (35%), Gaps = 18/317 (5%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL---- 72 + +I+ V S + RI +N +VIT D+ + + + L Sbjct: 32 ASLMTVILLLSVFAASGADAVILDRIVAVVNDDVITLTDVQEEGIQAIRRIVRETLGAER 91 Query: 73 -------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSFL 124 E+ + ELI+ L+ QE K I + + + G S E+ + L Sbjct: 92 ERLLRSTERQILDELILRRLQLQEATKEKIETAPAEIQSAIEELKKRNGLASDEELRAAL 151 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ + + F++ +A Q + +V K L+ E+ ++ ++ + Sbjct: 152 SREQLSEEQFRKGIADQVMLTKLVARRVRAKVVVLDEEVQQYYEQRQDQFREIPQFKIRH 211 Query: 185 FSIPDNKLQNQGF---VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + G +KRI++A+ + + +++A S G+ + + Sbjct: 212 LLVATPPQATPGELSRAKKRIEEAQTLLKKGTQFATVAKQYAEGPLASSSGEVWTMKHGE 271 Query: 242 LHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIE 298 L P+ + + T G I + ++ +K L A K E Sbjct: 272 LAPELEQAALALPIGQPSGIITTPAGFHLIVVEERVPGQTLSFDQVKERLRALLFEQKTE 331 Query: 299 KHEAEYVKKLRSNAIIH 315 E+++ LR+ A + Sbjct: 332 TKFKEWIESLRTKANVE 348 >gi|256823427|ref|YP_003147390.1| SurA domain-containing protein [Kangiella koreensis DSM 16069] gi|256796966|gb|ACV27622.1| SurA domain protein [Kangiella koreensis DSM 16069] Length = 427 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 115/310 (37%), Gaps = 15/310 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK------- 67 +L + C+ + ++ ++ +VI ++ +++ K Q Sbjct: 2 ILKKALIGFTLCLAAFS--LQAEVIDKVIAHVDEDVILQSELDRKVIQAKQQIRSRGGQL 59 Query: 68 -INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 L+K +++LI+++L+ Q +SG+ + + Q A+++G++ ++F L + Sbjct: 60 PPEDVLKKELLEQLIIQSLQYQMAVRSGMQLQPAELQQYAAQVAQSSGMTLDEFRLSLAQ 119 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 QGI F L + + + + + EI + Q M EY + +L + Sbjct: 120 QGIAYELFLDDLRKEILTGQLRDAFVSRRIKVSDKEIESLIQSMNAQNQVEYHLGHILIA 179 Query: 187 IPDNKLQNQGFVQKRIK-DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 + ++ + K+ + + +S G + ES++ Sbjct: 180 VQEDADEETQKQAKQNALKVMKELKAGADFAETAKVVSSSPDAAEGGDFGWRTESNMPTL 239 Query: 246 FQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG---GEIALKAYLSAQNTPTKIEKHE 301 F N++ + + P + G + I DKR + ++ + E + Sbjct: 240 FANVVNFLDTGDISQPIRSPSGFHILKIKDKRGEQQHLVQQTNARHILIRPDAITTESNA 299 Query: 302 AEYVKKLRSN 311 + ++ +R Sbjct: 300 KQQLQNIRQR 309 Score = 78.9 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 22/271 (8%), Positives = 65/271 (23%), Gaps = 5/271 (1%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 ++D +I I + Q + + + ++ + + Sbjct: 150 KVSDKEIESLIQSMNAQNQVEYHLGHILIAVQEDADEETQKQAKQNALKVMKELKAGADF 209 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 A + + + ++ + D + + Sbjct: 210 AETAKVVSSSPDAAEGGDFGWRTESNMPTLFANVVNFLDTGDISQPIRSPSGFHILKIKD 269 Query: 170 MKNITVREYLI--RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI- 226 + + PD Q+ + ++ +K + Sbjct: 270 KRGEQQHLVQQTNARHILIRPDAITTESNAKQQLQNIRQRVLAGEADFGDEAKKHSDDPG 329 Query: 227 HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIAL 284 G + P F+ N + P+ + G + + +R D + Sbjct: 330 SAKLGGNLGWNNLGVYDPVFEQTLTDLDVNEISEPFQSNFGWHIVQLLGRRTDDQTDAMK 389 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + K + ++++LR A + Sbjct: 390 RQQAMRILQQRKFGEEVENWIRELRDEAYVK 420 >gi|62178657|ref|YP_215074.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|75505914|sp|Q57TG8|SURA_SALCH RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|62126290|gb|AAX63993.1| peptidyl-prolyl cis-trans isomerase, survival protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] Length = 428 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 113/311 (36%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAIVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ + Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190 ++ + + I +V N+ + L E+ A + +N E +R +L ++P+N Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDASTELNLRHILIALPEN 186 Query: 191 KLQNQGFVQKRIKDAE-ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 Q +R ++ E +++ + G+ + +L F Sbjct: 187 PTSEQVNDAQRQAESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R + ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMNDQQARLK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEEI--AADIK 315 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 89/287 (31%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q + L + E S D+ Sbjct: 143 NNEVRRRITV--LPQEVDALAKQIGTQNDASTELN-LRHILIALPENPTSEQVNDAQRQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V+ ARN + ++ Q + IQ + + Sbjct: 200 ESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + ++I+V E R +L +Q K + A + + Sbjct: 260 RSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMN-DQQARLKLEEIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270 ++++ G + P F++ L K + P + G I Sbjct: 319 TTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R + + A K K + A ++++ R++A + Sbjct: 379 ELLDTRKVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKI 425 >gi|257465500|ref|ZP_05629871.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus minor 202] gi|257451160|gb|EEV25203.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus minor 202] Length = 317 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 105/316 (33%), Gaps = 15/316 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + +L+ F +S A R+ T++G +I + +++ L + Sbjct: 1 MKFTSAKSLLVAFVATLGLSQSLLAAEERVIATVDGNMIMESQVTRA---LGKKANTEAN 57 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 K A++ +I E L ++ I++SG+ D V+ + A GL+ LD QGI N Sbjct: 58 RKAALENIIDEMLVQKAIQQSGVKVDYRRVDQAIEEIAVRNGLTYGQLLDALDYQGITLN 117 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV---------REYLIRTV 183 ++Q +A Q + V ++ A Q + + Sbjct: 118 QYRQQIAQQMMMEAVRHQSIGKSIQVNPEDVRAQAQALMAKDKAAGKLKSVSGTEPRISH 177 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY-LLESD 241 + L + K + + + + G + L+ Sbjct: 178 ILIKTTPVLNDAQAKAKLNSIIADIKAGKTTFEEAAKANSVDYVSAADGGDLGFNFLDIY 237 Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKH 300 K Q T P+ +Q G + + D R A Q + E Sbjct: 238 DPAFANAAAKAKQGQITAPFKSQFGWHILKVTDYRQGDRTEDAYAQKAYEQLANQQAEAA 297 Query: 301 EAEYVKKLRSNAIIHY 316 ++VK LR A I Y Sbjct: 298 SKDWVKALRKTANIQY 313 >gi|89075561|ref|ZP_01161966.1| putative survival protein SurA [Photobacterium sp. SKA34] gi|89048701|gb|EAR54273.1| putative survival protein SurA [Photobacterium sp. SKA34] Length = 433 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 117/314 (37%), Gaps = 15/314 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------K 64 +K + ++ + S + ++ T+N VI D++ + + + Sbjct: 1 MKTWKYSVLSLMMMGMSATSMAAPQELDQVVMTVNDGVILQSDVNAMLKTVHLNAAEEHQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 N L + + +LI+E L+ Q+ ++ GI D + ++ A+ +S + L Sbjct: 61 QLPPNNILRQQVMDKLILENLQLQQAQQLGIRIDDSQLDKAIADVAKQRNMSVDQLRQSL 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 GI F++ + + + + L E+ + ++M T + Sbjct: 121 ANAGISYAMFREQMRNDMLASEARNIIVRKRVNVLPQEVESLAKQMAKQTQQNVQYNISQ 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I ++ ++ K ++AE+ + +++ + G+ ++ +++ Sbjct: 181 IQIRVDEDADKAARDKAKQEAEDIVAQLKKGANFSQLAYRYSKGPKALKGGEWGWMGKAE 240 Query: 242 LHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297 + F + ++ + +N P+ + G + I D + + ++ + + Sbjct: 241 MPTVFADQIQNNGKNAIIGPFRSGVGFHILKINDVKGMPSVSVVEVKARHILIKPSMILS 300 Query: 298 EKHEAEYVKKLRSN 311 + ++K+R + Sbjct: 301 DAAAKAELEKIRQS 314 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 26/272 (9%), Positives = 83/272 (30%), Gaps = 7/272 (2%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQEL-IVETLKKQEIEKSGITFDSNTVNYFFVQH 109 + ++ + Q I+ ++ + E K +K+ + + Sbjct: 154 VLPQEVESLAKQMAKQTQQNVQYNISQIQIRVDEDADKAARDKAKQEAEDIVAQLKKGAN 213 Query: 110 ARNTGLSAEDFSSFLD--KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 L + G + I + + I Sbjct: 214 FSQLAYRYSKGPKALKGGEWGWMGKAEMPTVFADQIQNNGKNAIIGPFRSGVGFHILKIN 273 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK-DCNKLEKFASKI 226 +V ++ I + + + + ++ +S + + + ++ Sbjct: 274 DVKGMPSVSVVEVKARHILIKPSMILSDAAAKAELEKIRQSIISGKQTFSAAAKAYSEDP 333 Query: 227 -HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIA 283 V+ G+ + + + P F++ ++ + + P+ + G + + +R + + A Sbjct: 334 GSAVNGGQLGWQVPNMYAPAFKDKVETLPVDKISEPFKSSFGWHIVEVEGRRKVDRTDAA 393 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 +K + K + ++++LR+ A I Sbjct: 394 MKNRAAQIIFNRKFNEEAQTWLQELRAGAYIE 425 >gi|117617860|ref|YP_855486.1| peptidylprolyl cis-trans isomerase SurA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559267|gb|ABK36215.1| peptidylprolyl cis-trans isomerase SurA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 432 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 31/310 (10%), Positives = 100/310 (32%), Gaps = 15/310 (4%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--- 70 K L + +F + ++ + + ++ +N +V+ + +K Sbjct: 3 KTLISLLTAGLFGAMSQGAFAAPELMDKVLAVVNKDVVLASQQEALVQKVKASAQESGQS 62 Query: 71 -----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 L K A+ LI E+L+ Q ++ G+ + A + ++ + + L Sbjct: 63 LPDDATLRKQALDRLIQESLQLQLADRQGLKISDTQLEQAIQSIAADNKMTLDQLRAQLA 122 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 ++G+ +++ + + + +V +N + E E+ + ++ Sbjct: 123 REGLTYAQYREEVRREILMNEVRRNQVRRRINISEQEVKQVVDILAKQGQQQQQYHVGHI 182 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDL 242 + + + E L + + +S + G ++ ++ Sbjct: 183 QVALPDNPSAEQLNAAKSKIERILAALKQGADFRKMAIAESSGPKALEGGDWGWMSPQEM 242 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIE 298 + + + + P + G+ I + D + + ++ + + E Sbjct: 243 PTLMAEAVQGTKKGDIVGPLRSGAGLHIIKVFDTKGQQQVVQTEVRARHILIKPSIILSE 302 Query: 299 KHEAEYVKKL 308 + + + Sbjct: 303 EKAKGMLDGI 312 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 82/291 (28%), Gaps = 25/291 (8%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF------------ 97 I ++ +R + + I+ + K V L + ++Q+ I Sbjct: 138 EILMNEV-RRNQVRRRINISEQEVKQVVDILAKQGQQQQQYHVGHIQVALPDNPSAEQLN 196 Query: 98 ----DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + Q A ++ + S +G + V Sbjct: 197 AAKSKIERILAALKQGADFRKMAIAESSGPKALEGGDWGWMSPQEMPTLMAEAVQGTKKG 256 Query: 154 LKYGNLEM-----EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 G L I K + V+ + + P L + + Sbjct: 257 DIVGPLRSGAGLHIIKVFDTKGQQQVVQTEVRARHILIKPSIILSEEKAKGMLDGILHDI 316 Query: 209 RLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKG 266 + + EK++ V G+ + + P+F++++ + + P+ T G Sbjct: 317 KSGKASFASLAEKYSEDPGSAVQGGELGWSDPNVYVPEFRDMVNRLQPGQISEPFRTTHG 376 Query: 267 VEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + ++R + + + ++ +LR A I Sbjct: 377 WHIVQLEERRSQDATNKAQEQRAYQLIYNRRFTEESQAWLDELRDEAYIQI 427 >gi|30248886|ref|NP_840956.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas europaea ATCC 19718] gi|81722212|sp|Q82W17|SURA_NITEU RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|30138503|emb|CAD84793.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas europaea ATCC 19718] Length = 448 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 51/323 (15%), Positives = 118/323 (36%), Gaps = 22/323 (6%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSS-----RIRTTINGEVITDGDISKRIALLKL 65 F K Y V + + S++ RI +N EVIT +I++ + Sbjct: 11 KFRKYWLIYAVFATMLAADVFAQSSYSREDIKPIDRIVAVVNEEVITQQEINEVLQNTVQ 70 Query: 66 QKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 Q LEK ++ LI++ ++ Q ++ G+T N ++ + ++ L+ Sbjct: 71 QLQRQNTQLPRMEILEKQLLERLILKRIQLQRAKEIGLTVSDNDLDQTLRRIIQDNHLTM 130 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 ++F L ++G N F++ + + + + + + + E EI Q N Sbjct: 131 DEFRQVLLQEGTDMNRFREEIRGEILMSRLKEQEVNSRVNVTENEIDNFLQNQANSPAGN 190 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKA 234 R + ++ ++ ++ R K AE + L + + +F+ + G+ Sbjct: 191 EEYRIAHILVQISEQMDEAQIEARHKRAETAYESLRQGADFVRVSAEFSDAPDAMQGGEL 250 Query: 235 QYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG-----GEIALKAYL 288 + L P + L+ T + G + + ++R E ++ Sbjct: 251 GWRPLGQLGSPFTEMLVNMQPGEVTPVVRSPVGFHILKLLERRQQEQKVTIIEQTHAQHI 310 Query: 289 SAQNTPTKIEKHEAEYVKKLRSN 311 + + E+ + + +L Sbjct: 311 LIKVSELVSEEDAHQLINQLMER 333 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 36/280 (12%), Positives = 81/280 (28%), Gaps = 10/280 (3%) Query: 46 INGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 +N V +T+ +I + + G E L+ + + E + + T Sbjct: 165 VNSRVNVTENEIDNFLQN-QANSPAGNEEYRIAHILVQISEQMDEAQIEARHKRAETAYE 223 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND------FMLKYGN 158 Q A +SAE + QG +V + Sbjct: 224 SLRQGADFVRVSAEFSDAPDAMQGGELGWRPLGQLGSPFTEMLVNMQPGEVTPVVRSPVG 283 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + +++ + I ++L ++ + I E + Sbjct: 284 FHILKLLERRQQEQKVTIIEQTHAQHILIKVSELVSEEDAHQLINQLMERIHNGADFMDV 343 Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRD 277 + + + G ++ D P+F+ + + P T G I + ++R Sbjct: 344 AKAHSEDASASAGGDLGWVSPGDTVPEFEQAMNALLPGQVSPPVRTPFGWHLIKVIERRS 403 Query: 278 LGGEIALKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K + E++++LR A + Y Sbjct: 404 QDVSERQQREAARHTIHARKADAIVQEWLQQLRDQAYVEY 443 >gi|253988050|ref|YP_003039406.1| peptidyl-prolyl cis-trans isomerase SurA [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779500|emb|CAQ82661.1| chaperone SurA precursor (peptidyl-prolyl cis-trans isomerase) [Photorhabdus asymbiotica] Length = 433 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 100/304 (32%), Gaps = 16/304 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--------NGEL 72 +++ ++ + +I +N V+ + DI+ + +K L Sbjct: 7 LILGLMFSVSTAFAAPQQMDKIAAVVNNGVVLESDINSLLQSVKRDAQHAGQQIPDEHTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q ++ GIT T++ A ++ + + G+ + Sbjct: 67 RHQILERLIMDNILLQMAKQMGITIPDQTLDSTIANIAAQNHITRDQMKHRIVADGMSFD 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L EI +++ N + + IP + Sbjct: 127 TYRNQIRKEMLIAEVRNNEVRRRVTILPQEIDTLAKQISNQNANDSELNISHILIPLPEN 186 Query: 193 QNQGFVQKRI---KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 +Q ++K +++ + G + +L F Sbjct: 187 PDQTQMEKATAVVHKIMSELKNGVDFGKLAIAYSADPQALKGGNMGWSKLQELPTLFAAQ 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + P + G + + D R + ++ + +P ++ Sbjct: 247 LQSAQKGAIVGPIRSGVGFHILKVNDIRGGNATIAVTEVHARHILLRISPVMTDEQARAK 306 Query: 305 VKKL 308 ++++ Sbjct: 307 LQQI 310 Score = 84.7 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 89/305 (29%), Gaps = 18/305 (5%) Query: 28 VPIVSYKSWAMSSRIRTTI-NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELI 81 + +Y++ + + N EV I +I + Q N I+ LI Sbjct: 123 MSFDTYRNQIRKEMLIAEVRNNEVRRRVTILPQEIDTLAKQISNQNANDSELNIS-HILI 181 Query: 82 V-----ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + + ++ S N + + Sbjct: 182 PLPENPDQTQMEKATAVVHKIMSELKNGVDFGKLAIAYSADPQALKGGNMGWSKLQELPT 241 Query: 137 YLAIQSIWPD--VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 A Q + G +++ + I V E R +L I Sbjct: 242 LFAAQLQSAQKGAIVGPIRSGVGFHILKVNDIRGGNATIAVTEVHARHILLRISPVMTDE 301 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKK 252 Q K + A + R + ++F+ + G + P F++ ++ Sbjct: 302 QA-RAKLQQIAGDIRSGKTDFADAAKEFSEDPGSALRGGDLGWSTPDIFDPAFRDALMRL 360 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ + P + G I + D R + ++A K K + ++++ R++ Sbjct: 361 NKGEISQPIHSSFGWHLIQLLDTRKVDKTDVAQKDRAYRMLFNRKFTEEAQSWMQEQRAS 420 Query: 312 AIIHY 316 A + Sbjct: 421 AYVKI 425 >gi|296134602|ref|YP_003641844.1| SurA domain protein [Thiomonas intermedia K12] gi|295794724|gb|ADG29514.1| SurA domain protein [Thiomonas intermedia K12] Length = 459 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 93/297 (31%), Gaps = 21/297 (7%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQELIV 82 ++ S S I + +VITD D+ R+ + Q +L + ++I Sbjct: 45 STFSSARTSDGIAAIVGNQVITDYDLQLRVEATRQQAQAAGATLPSAAQLRSQVLNQMID 104 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E Q E+ G+ + +T++ Q A N L+ + S ++K+G+G + ++ L + Sbjct: 105 EVALAQYAEQIGMGVNQDTLDRAIAQVASNNKLTVPELRSAIEKEGMGWSTYRDQLKREI 164 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV----LFSIPDNKLQNQGFV 198 + + + E EI K + L + V Sbjct: 165 LISRLRERSMAQLPTVSESEIDEFLSKQDAAAASPQAAYDIAQIFLPVAQNATEAQVAAV 224 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +++I + + + G + L F + Sbjct: 225 KQKIDAIDAKLKAGADFAQLATQDSQGEGAKRGGDLGMRPANRLPTLFVDTVRNLQPGQI 284 Query: 258 TNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + G + + A+++ + + +++R+ A Sbjct: 285 SPVIRSAAGFHILKLLQVSGETAAPTTAMQSEVREIVLSASTDA------QRIRAKA 335 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 41/129 (31%), Gaps = 3/129 (2%) Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QN 248 Q + A+ + + K + + G ++L L P Sbjct: 327 DAQRIRAKAELDSIAQAVQNGKVQFSEKARELSQDPATAAKGGALGWVLPGQLDPVLDAA 386 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKK 307 L + + + + P V V + + D+ E + K L K + E V+ Sbjct: 387 LQRLNPGDVSAPIVMGNKVVLLQLVDRAVRPLEASQKRALAREVLQRQKAAEDFDELVRD 446 Query: 308 LRSNAIIHY 316 +R+ +H Sbjct: 447 VRARTYVHI 455 >gi|254491890|ref|ZP_05105069.1| SurA N-terminal domain family [Methylophaga thiooxidans DMS010] gi|224463368|gb|EEF79638.1| SurA N-terminal domain family [Methylophaga thiooxydans DMS010] Length = 421 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 111/318 (34%), Gaps = 20/318 (6%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71 + Y + + +++ RI +N EVI + ++ + ++ Q + Sbjct: 1 MIKYLMAALLLTTNVLA----QPLDRITAVVNDEVILESELMEMQQTVRQQLRQRDAAIP 56 Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L K ++ LI++ L+ Q E+ G+ + +N Q A N ++ F L+ Sbjct: 57 PSEVLNKQVLERLIMQRLQLQRAEQVGVRVGDDALNAALKQIANNNNMNLRQFRDVLEDD 116 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 G ++F+ + + I + K+ + E E+ E + + Sbjct: 117 GYNFSNFRNTIREEMIITRLRKSQVEDRVVVSEREVDNFLTTQTIQEGGEVEYQLQHILV 176 Query: 188 PDNKLQNQGFV---QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + V +++++ + + ++ + + G+ + +L Sbjct: 177 SMPEAASPEQVQEAEQQLQKVQALLDEGGEFSEVAAGYSDGQNALEGGELGWRKHGELPS 236 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG---GEIALKAYLSAQNTPTKIEKH 300 F + + + + G + + DK+ + L +++ + + Sbjct: 237 LFAEVVPDLEVGEVSQALRSGSGFHLVRVKDKKSQELHLVKQTLASHILIRANELTSAEQ 296 Query: 301 EAEYVKKLRSN-AIIHYY 317 E +++LR A + Sbjct: 297 AEERLQQLRQRIAKGENF 314 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 50/137 (36%), Gaps = 3/137 (2%) Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD 241 I N+L + ++R++ + + + + G + Sbjct: 282 SHILIRANELTSAEQAEERLQQLRQRIAKGENFAELARAHSDDTGSAIDGGSLGWTSPGV 341 Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEK 299 + P+F+ + + ++ + ++ G I + D+R+ + + Q KI++ Sbjct: 342 MVPEFEEKMNALAIGEMSDVFESRFGWHLIKVYDRREQNMADEFKRNKAREQIRQRKIDE 401 Query: 300 HEAEYVKKLRSNAIIHY 316 +++ +R A + Y Sbjct: 402 ELESWLRAMRDEAYVEY 418 >gi|149907522|ref|ZP_01896269.1| survival protein surA [Moritella sp. PE36] gi|149809192|gb|EDM69121.1| survival protein surA [Moritella sp. PE36] Length = 428 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 34/314 (10%), Positives = 104/314 (33%), Gaps = 19/314 (6%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--------KRIALLKLQK 67 + + + + + + +N EVI D++ + + Sbjct: 1 MLKTLLSGVIVVTSWQAQAELTKLDEVIAIVNEEVILASDVNTLTRSVTARATKAGQTLP 60 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L + A+ +LI+++L+ Q +K G+ + + A+ + E + Sbjct: 61 SQEVLTQQALDKLIIDSLQLQMAKKMGMRISNAQLEDTLNNIAKGDNQTVEQLRQSVVAD 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 G N +K+ + Q + +V + + + ++ + + R + Sbjct: 121 GGDFNDYKEEIRTQILTNEVQRMQMRRRITISDQDVDNLIAIIDEQGQKNRQYRVNHIML 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPK---DCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + ++ + + +L N ++ + G ++ +++ Sbjct: 181 RVPNEADNATMEALQTKIADIQTQLNAGEPFANLALALSAGPKALDGGDWGWMNINEMPT 240 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG---GEIALKAYLSAQ----NTPTK 296 F + + + + P + G+ I + D R + + ++ + + K Sbjct: 241 LFAEAVTNAKKGDIIGPIRSGAGLHIIQVSDMRGVETVLTKEVNARHILIKPSVILSDDK 300 Query: 297 IEKHEAEYVKKLRS 310 + EY+ +++S Sbjct: 301 AQSLLNEYLTRIKS 314 Score = 75.9 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 25/275 (9%), Positives = 71/275 (25%), Gaps = 11/275 (4%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI-TFDSNTVNYFFVQH 109 I+D D+ IA++ Q + V +++ + + + Sbjct: 151 ISDQDVDNLIAIIDEQGQKN--RQYRVNHIMLRVPNEADNATMEALQTKIADIQTQLNAG 208 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM-----EIP 164 L+ + G V G + I Sbjct: 209 EPFANLALALSAGPKALDGGDWGWMNINEMPTLFAEAVTNAKKGDIIGPIRSGAGLHIIQ 268 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + + + + + + P L + + + + + ++ Sbjct: 269 VSDMRGVETVLTKEVNARHILIKPSVILSDDKAQSLLNEYLTRIKSGDAEFAELAKAYSD 328 Query: 225 KI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGE 281 V G+ + + P F+ + + + + G + + D+R + Sbjct: 329 DTGSAVKGGELGWADPNIYVPAFKLALQDLKKGEISPTFRSSHGWHIVQLIDRRTQDTTD 388 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A + + + ++ +L+ A I Sbjct: 389 KANRQKAWQLLYNRRAAEESQSWLNELKQEAYIRI 423 >gi|322420756|ref|YP_004199979.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18] gi|320127143|gb|ADW14703.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18] Length = 323 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 110/324 (33%), Gaps = 20/324 (6%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK- 67 +S KL+ + C +P S K + +NG VIT ++ + + L Q Sbjct: 1 MSALKKLIPVTVAALALCALPGCSDKGQTGAP--VVKVNGSVITKPELDRAVKALLAQNK 58 Query: 68 -----INGELEKI---AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 +++K A+++L L QE +K I D Q R + + E+ Sbjct: 59 VTQALPPEQMKKAADSALEQLTSAELLYQEGKKLEI-KDLEQQVEQKYQKNRTSFPTKEE 117 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI-TVREY 178 + L G+ + ++ + + + + V F K + E K + Sbjct: 118 YEKALKATGMTEAEVREMMRKEIVVNNFVDKQFSSKATCSDAEARKFYDDNKAKLFEKGE 177 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESR---LRLPKDCNKLEKFASKIHDVSIGKAQ 235 +R + ++ +K + AE + + ++ + G+ Sbjct: 178 RLRARHILVSVDQKGGPEEKKKAREKAEALLKRVQKGEDFAAVAKVESTCPSRANGGELG 237 Query: 236 YLLESDLHPQFQNLLKKS--QNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQ 291 + + P F+ + + T+ G I + ++ + +K ++ Sbjct: 238 VFGKGQMTPPFEKAAFALKGKGELSKVVETEFGYHIIKLEERIAPSNDRFEDVKFQIAQY 297 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIH 315 + K A ++ +LR A I Sbjct: 298 LKKEQTRKAVAAFLAELRHKAKIE 321 >gi|145638627|ref|ZP_01794236.1| stationary-phase survival protein SurA [Haemophilus influenzae PittII] gi|145272222|gb|EDK12130.1| stationary-phase survival protein SurA [Haemophilus influenzae PittII] Length = 311 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 51/321 (15%), Positives = 113/321 (35%), Gaps = 24/321 (7%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + F+ L ++ + + C+ + R+ T++G + + + + Sbjct: 1 MKKFV--LRSFLLAALGCVAFV---SMAQAEERVVATVDGIPVLESQV-------RANMG 48 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QG Sbjct: 49 KKGDRQSAIDKIIDDILVQKAVQESGVKIDPREIDHVVEDTAARNGLTYGQFLDALDYQG 108 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI---------PANKQKMKNITVREYL 179 I N F+Q +A Q + V E+ A ++ + Sbjct: 109 ISLNAFRQQIANQMMMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVTGKEY 168 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY-L 237 + + L + ++ K + + K++ + G Y Sbjct: 169 EVRHILLKLNPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAF 228 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTK 296 E+ Q ++K Q + P+ T+ G + + RD + T+ Sbjct: 229 PETYAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGTRDGDLTSEAYTQKAYERLVNTQ 288 Query: 297 IEKHEAEYVKKLRSNAIIHYY 317 ++ ++VK LR A I Y+ Sbjct: 289 LQDATNDWVKALRKRANIQYF 309 >gi|148827655|ref|YP_001292408.1| thymidylate kinase [Haemophilus influenzae PittGG] gi|148718897|gb|ABR00025.1| thymidylate kinase [Haemophilus influenzae PittGG] Length = 311 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 115/316 (36%), Gaps = 20/316 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 + + + V++ S A + R+ T++G I + + + Sbjct: 1 MKKFVLRSFLLATLGCVAFTSMAQAAERVVATVDGIPILESQV-------RANMGKKGDR 53 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNT 113 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEI----------PANKQKMKNITVREYLIRTV 183 F+Q +A Q + V G E+ K + + +EY +R + Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIGVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY-LLESDL 242 L + Q Q ++ + L+ + + G Y E+ Sbjct: 174 LLKLNPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPETYA 233 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHE 301 Q ++K Q + P+ T+ G + + RD + T+++ Sbjct: 234 PQFAQIVVKSKQGVISAPFKTEFGWHILEVTGVRDGDLTAEAYTQKAYERLVNTQLQDAT 293 Query: 302 AEYVKKLRSNAIIHYY 317 ++VK LR A I Y+ Sbjct: 294 KDWVKALRKRANIQYF 309 >gi|197118895|ref|YP_002139322.1| PpiC-type peptidylprolyl cis-trans isomerase [Geobacter bemidjiensis Bem] gi|197088255|gb|ACH39526.1| peptidylprolyl cis-trans isomerase, PpiC-type [Geobacter bemidjiensis Bem] Length = 351 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 43/298 (14%), Positives = 95/298 (31%), Gaps = 17/298 (5%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---------NGELEKIAVQELIVET 84 + A S +NG IT D+ + + ++ Q + E A+++L Sbjct: 51 PAAAQKSPAVVRVNGTPITKLDVERAVKVMLAQNKVDQPIPPELQKQAESAALEQLTSAE 110 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 L QE KS I + Q+ + AE + + +++ + + Sbjct: 111 LLYQEASKSKIPDLDKMIEQKVSQNRQKFKTEAELVEALSALEMTLP-DLEEFTRKEIVL 169 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNI-TVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + F K + E+ N + ++ + ++ +K + Sbjct: 170 STYIAEHFQNKASVSDEEVKKFYDDNLNQYFKKPESVKASHILVGTDEKSTPEDKKKAKE 229 Query: 204 DAEESRLRLPKDCNKLEK---FASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 AE RL + ++ G + P+F+ K + Sbjct: 230 KAEALLKRLQAGEDFAAVAKGESTCPSASEGGDLGEFGRGQMVPEFEEAAFKLKPGEMSG 289 Query: 260 PYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T+ G I + K++ E +K + K ++ + ++ +L+ A I Sbjct: 290 VVETKFGYHIIKVTGKQEAAAEKLENVKETIVEFLKKQKEQQELSNFIDELKKKAKIE 347 >gi|319940878|ref|ZP_08015217.1| hypothetical protein HMPREF9464_00436 [Sutterella wadsworthensis 3_1_45B] gi|319805760|gb|EFW02541.1| hypothetical protein HMPREF9464_00436 [Sutterella wadsworthensis 3_1_45B] Length = 460 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 98/298 (32%), Gaps = 18/298 (6%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVE 83 + + RI +N ++IT+ ++ +R+ + + L ++ LI E Sbjct: 40 APAASGELDRIVAVVNNDIITEHELEQRVHTVAINLRRQNIQLPAMELLRAQVLERLISE 99 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 Q ++GI D VN Q AR LS E+ L G+ F+ + + Sbjct: 100 RAILQRARQTGIRVDDQMVNASVEQIARQNNLSIEELRQRLAADGVNFASFRNEIRDEIT 159 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + + + K E EI A + I + + V + + + K Sbjct: 160 TQRLREREVNEKIDISESEIDAYLAEQAGIKGDDKMEYHVEHILLPVETPAENDSVKTAA 219 Query: 204 DAEESRLR-LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPY 261 ++ R R + F+ + G + +DL F + L S + Sbjct: 220 ESLAKRARDGENFSSLAASFSRADDAMKGGDLGWRSLNDLPATFAEALRANSTPGSVYVV 279 Query: 262 VTQKGVEYIAICDKRD--------LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 +Q+ + DKRD E ++ + E + +++ Sbjct: 280 SSQRAWHVFKLEDKRDGVQAKLGGGPVEQTHARHILMFVSDITPEGDVIRRLNDIKNR 337 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 30/282 (10%), Positives = 79/282 (28%), Gaps = 11/282 (3%) Query: 46 INGEV-ITDGDISKRIALLKLQKINGELEKIAVQELI-------VETLKKQEIEKSGITF 97 +N ++ I++ +I +A K + ++E L+ +++K + Sbjct: 168 VNEKIDISESEIDAYLAEQAGIKGDDKMEYHVEHILLPVETPAENDSVKTAAESLAKRAR 227 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 D + +R + + + A + V + + Sbjct: 228 DGENFSSLAASFSRADDAMKGGDLGWRSLNDLPATFAEALRANSTPGSVYVVSSQRAWHV 287 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + Q E + + +++ + Sbjct: 288 FKLEDKRDGVQAKLGGGPVEQTHARHILMFVSDITPEGDVIRRLNDIKNRVQSGEADFAT 347 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276 + G +L D P+F+ ++ K ++P T G I + ++R Sbjct: 348 MARLHSVDSTATRGGDLGWLQPGDTVPEFEGVMNKLKPGQISDPIRTPYGYHLIQVVERR 407 Query: 277 DLGGEIALKAYL--SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + K+ + E+ ++LR A + Sbjct: 408 TEKDGNPERMRVAARQAIRQKKLAEASYEWERELRDQAFVEI 449 >gi|294338549|emb|CAZ86878.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase, surA [Thiomonas sp. 3As] Length = 472 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 93/297 (31%), Gaps = 21/297 (7%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQELIV 82 ++ S S I + +VITD D+ R+ + Q +L + ++I Sbjct: 58 STFSSARTSDGIAAIVGNQVITDYDLQLRVEATRQQAQAAGATLPSAAQLRSQVLNQMID 117 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E Q E+ G+ + +T++ Q A N L+ + S ++K+G+G + ++ L + Sbjct: 118 EVALAQYAEQIGMGVNQDTLDRAIAQVASNNKLTVPELRSAIEKEGMGWSTYRDQLKREI 177 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV----LFSIPDNKLQNQGFV 198 + + + E EI K + L + V Sbjct: 178 LISRLRERSMAQLPTVSESEIDEFLSKQDAAAASPQAAYDIAQIFLPVAQNATEAQVAAV 237 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +++I + + + G + L F + Sbjct: 238 KQKIDAIDAKLKAGAAFAQLATQDSQGEGAKRGGDLGMRPANRLPTLFVDTVRNLQPGQI 297 Query: 258 TNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + G + + A+++ + + +++R+ A Sbjct: 298 SPVIRSAAGFHILKLLQVSGETAAPTTAMQSEVREIVLSASTDA------QRIRAKA 348 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 41/129 (31%), Gaps = 3/129 (2%) Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QN 248 Q + A+ + + K + + G ++L L P Sbjct: 340 DAQRIRAKAELDSIAQAVQNGKVQFSEKARELSQDPATAAKGGALGWVLPGQLDPVLDAA 399 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKK 307 L + + + + P V V + + D+ E + K L K + E V+ Sbjct: 400 LQRLNPGDVSAPIVMGNKVVLLQLVDRAVRPLEASQKRALAREVLQRQKAAEDFDELVRD 459 Query: 308 LRSNAIIHY 316 +R+ +H Sbjct: 460 VRARTYVHI 468 >gi|114569774|ref|YP_756454.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Maricaulis maris MCS10] gi|114340236|gb|ABI65516.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Maricaulis maris MCS10] Length = 435 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 38/293 (12%), Positives = 95/293 (32%), Gaps = 19/293 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLK 64 T++ + + ++ + P+ + + A + + +N E IT D+ R+ L+ Sbjct: 7 RTNMRLLMTCAKRIVLSLLAFVAPMCATNAHAQTTEGVAALVNDEPITTVDVRNRMRLII 66 Query: 65 LQKINGELEK--------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 ++++ A++ L+ E L+ Q + I + + A + Sbjct: 67 ASTGMSQIDEGTLSRIQDQAMRGLVDEHLQLQAASEYDIEVSDAEITNSLLDLADRNNTT 126 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + L G+ + + L + W +V + + E +I +++ + Sbjct: 127 IDVIIQDLQSSGVDVSTLRHQLEAEIAWQIIVNGRYGSRIRISEQQIELALERLAASASQ 186 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 R + +R+ + +F+ + G + Sbjct: 187 -PQFRIFEMLFEVPGPGQEEQTIQRVITVMNQLQQGATFPELARQFSDAPSAANGGDIGW 245 Query: 237 LLESDLHPQFQNLLKKSQNN---------TTNPYVTQKGVEYIAICDKRDLGG 280 + S L P+ ++ + + +NP G IA+ RD Sbjct: 246 ITASQLQPEVAAIMPQMRGQYDQSGGRGALSNPIEVPGGFMVIALVGARDGTT 298 >gi|229846544|ref|ZP_04466652.1| stationary-phase survival protein SurA [Haemophilus influenzae 7P49H1] gi|229810637|gb|EEP46355.1| stationary-phase survival protein SurA [Haemophilus influenzae 7P49H1] Length = 311 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 113/316 (35%), Gaps = 20/316 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 + + + V++ S A R+ T++G + + + + Sbjct: 1 MKKFILKSFLLATLGCVAFASMAQAEERVVATVDGIPVLESQV-------RANMGKKGDR 53 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNT 113 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEI----------PANKQKMKNITVREYLIRTV 183 F+Q +A Q + V E+ K + + +EY +R + Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY-LLESDL 242 L + Q Q ++ + L+ + + G Y E+ Sbjct: 174 LLKLNPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPETYA 233 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHE 301 Q ++K Q + P+ T+ G + + RD + T+++ Sbjct: 234 PQFAQTVVKSKQGVVSAPFKTEFGWHILEVTGVRDGDLTAEAYTQKAYERLVNTQLQDAT 293 Query: 302 AEYVKKLRSNAIIHYY 317 ++VK LR A I Y+ Sbjct: 294 NDWVKALRKRANIQYF 309 >gi|220919568|ref|YP_002494872.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-1] gi|219957422|gb|ACL67806.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-1] Length = 317 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 88/310 (28%), Gaps = 19/310 (6%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKIN 69 + L C + + +NGE I +++ + + Q Sbjct: 8 ILIATALAAGCGRCGGARSGERPAPGAVAVVNGEPIAPDAVARELRDAQAGAEGQGQATG 67 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 L + + +L+ L Q+ I + V F++ F L ++ + Sbjct: 68 DVLRRRVLDDLVDRALLLQQARARSIVVGQDQVERAFLRLRAE--YPGTHFDDLLAQERL 125 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 K L Q + + + + ++ E+ + + + + Sbjct: 126 SQAELKARLKDQLTVERLFEQEVFPQVQVVDAEVERYYAEHGAEFQEPERVHVLQIVV-- 183 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQN 248 ++ + E+ R + + S G + F Sbjct: 184 ------ASREEAAQVREKLRRNPQTFAEVARRSSIAPEGKSGGDLGLIGRGAGFPEVFDT 237 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVK 306 N ++ + G + +K+ +A ++ + K +AEY++ Sbjct: 238 CFSLPVNVISDVTPSPYGFHLFKVVEKKPAQRRTLEQARAEIAEKLGREKRAGAQAEYLE 297 Query: 307 KLRSNAIIHY 316 LR A I Sbjct: 298 ALRKRAQIDI 307 >gi|330818272|ref|YP_004361977.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia gladioli BSR3] gi|327370665|gb|AEA62021.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia gladioli BSR3] Length = 451 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 42/338 (12%), Positives = 112/338 (33%), Gaps = 30/338 (8%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVP-----IVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 F +++ ++ V + ++ + +N VIT ++ +R+ Sbjct: 1 MKKSLRFAAIVSGLAAVMSLLSVTPAAAQALGSSGATLADEVVAVVNNGVITARELDQRV 60 Query: 61 ALLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 L+ + EL + +++VE ++ Q+ + GI TV + A Sbjct: 61 GLISRRLQQQKVPVPPPDELRSQVLNQMVVERIQLQKAKDDGIEVSDATVQSTLQRLAAA 120 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 G++ + + + L+ G+ + F + I + + + K + E+ + + Sbjct: 121 NGMTVDQYRAQLEALGVPWSTFSGDARNELILSRLREKEVDSKITVTDAEVASYIASQRG 180 Query: 173 I---TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA--EESRLRLPKDCNKLEKFASKIH 227 + ++ + + + P N Q+Q + ++ D +++ + Sbjct: 181 PNSGSQQDVRLEHIFVAAPQNAPQDQIDIAQKKADGLLKQALASGADFEKLARNSSEAKD 240 Query: 228 DVSIGKAQYLLESDLH-PQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGE---- 281 + G + L Q + + + G E + + D+R G Sbjct: 241 AKTGGDLGFKAPGSLPADVVQAVSQLRPGQVSPNLIRVPDGFEIVRLVDRRPASGTVGAS 300 Query: 282 ----IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++ + K E + + +R+ I Sbjct: 301 PKIVQTHVRHILLRVGEGKSESQARQQLIDIRNQ--IE 336 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 17/145 (11%), Positives = 53/145 (36%), Gaps = 2/145 (1%) Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 + + + + +++ ++++ D N ++ G Sbjct: 300 SPKIVQTHVRHILLRVGEGKSESQARQQLIDIRNQIEAGGDFANFARTYSQDGSASQGGD 359 Query: 234 AQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQ 291 ++ + P+F+ + + + P T+ G I + +RD G + + + Sbjct: 360 LGWISPGETVPEFERAMSQLQDGQISQPVRTEYGYHLIQVLGRRDAEGSVQKQMDIARQA 419 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHY 316 K E+ A+++++LR ++ + Sbjct: 420 IGQRKAEQAYADWLRELRDSSYVQI 444 >gi|197124850|ref|YP_002136801.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. K] gi|196174699|gb|ACG75672.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. K] Length = 317 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 88/310 (28%), Gaps = 19/310 (6%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKIN 69 + L C + + +NGE I +++ + + Q Sbjct: 8 ILIATALAAGCGRCGAARSGERPAPGAVAVVNGEPIAPDAVARELRDAQAGAEGQGQATG 67 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 L + + +L+ L Q+ I + V F++ F L ++ + Sbjct: 68 DVLRRRVLDDLVDRALLLQQARARSIVVGQDQVERAFLRLRAE--YPGTHFDDLLAQERL 125 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 K L Q + + + + ++ E+ + + + + Sbjct: 126 SQAELKARLKDQLTVERLFEQEVFPQVQVVDAEVERYYAEHGAEFQEPERVHVLQIVV-- 183 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQN 248 ++ + E+ R + + S G + F Sbjct: 184 ------ASREEATQVREKLRRNPQTFAEVARRSSIAPEGKSGGDLGLIGRGAGFPEVFDT 237 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVK 306 N ++ + G + +K+ +A ++ + K +AEY++ Sbjct: 238 CFSLPVNVISDVTPSPYGFHLFKVVEKKPAQRRTLEQARAEIAEKLGREKRAGAQAEYLE 297 Query: 307 KLRSNAIIHY 316 LR A I Sbjct: 298 ALRKRAQIDI 307 >gi|308051066|ref|YP_003914632.1| peptidylprolyl isomerase [Ferrimonas balearica DSM 9799] gi|307633256|gb|ADN77558.1| Peptidylprolyl isomerase [Ferrimonas balearica DSM 9799] Length = 428 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 95/305 (31%), Gaps = 14/305 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--------LQ 66 +L + + ++ + + +N VI +I +R+ +K Sbjct: 2 ILRQLLMGAMAALMFGQALAQPQPLDEVAVLVNDGVILKSEIDERMTSVKRGALQAGQQL 61 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 + L + LI E+L+ Q E+ G+ ++ AR G++ + ++ Sbjct: 62 PSDAALRTQVIDRLIAESLQLQMAERMGLVISDIQLDQTLENMAREQGMTLQGLRQEIES 121 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 G +++ + + V + + EI + + +++ Sbjct: 122 DGTNYAAYREQIRREITIGQVQRIQVQRRVQISPQEINTLVEMINEQGLQDAEFHVGHIL 181 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 I + + R E +S + G ++ +++ F Sbjct: 182 IDFGGDET--AARARADKVLELLEGGADFAQTALAASSGPKALEGGDWGFMNINEMPTLF 239 Query: 247 -QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTKIEKHEA 302 + + + + P + G I I D R + + ++ + +P E Sbjct: 240 AEVVKDAKKGDIIGPIKSGAGFHIITIYDTRGQEVQEVAEVNARHILLKPSPILSEDMAK 299 Query: 303 EYVKK 307 + + Sbjct: 300 TLLDE 304 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 30/286 (10%), Positives = 71/286 (24%), Gaps = 22/286 (7%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS---------- 99 IT G + + ++Q E+ + E+I E + G Sbjct: 136 EITIGQVQRIQVQRRVQISPQEINTLV--EMINEQGLQDAEFHVGHILIDFGGDETAARA 193 Query: 100 --NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + V A + S +G V G Sbjct: 194 RADKVLELLEGGADFAQTALAASSGPKALEGGDWGFMNINEMPTLFAEVVKDAKKGDIIG 253 Query: 158 NLEM-----EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 ++ I + + + + + P L + + + Sbjct: 254 PIKSGAGFHIITIYDTRGQEVQEVAEVNARHILLKPSPILSEDMAKTLLDEFMADVKDGK 313 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 + + G + + P F++ + + P+ + G + Sbjct: 314 ADFGELAREHSDDPGSAARGGDLGWADPNMYVPAFRDTLARLKVGEYSEPFRSSHGWHVV 373 Query: 271 AICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + D+R + A K + + +++R+ A I Sbjct: 374 QLLDRRVTDATDQANSDRAYQLLFRRKFGEQVNAWQEEMRAAAYIE 419 >gi|253700324|ref|YP_003021513.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21] gi|251775174|gb|ACT17755.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21] Length = 355 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 43/298 (14%), Positives = 96/298 (32%), Gaps = 17/298 (5%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---------NGELEKIAVQELIVET 84 + A S +NG IT D+ + + ++ Q + E A+++L Sbjct: 55 PAAAQKSPAVVRVNGTPITQLDVERAVKVMLAQNKIDQPLPPELQKQAESAALEQLTAAE 114 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 L QE KS I + Q+ + AE + + +++ + + Sbjct: 115 LLYQEASKSKIPDLDKMIEQKVSQNRQKFKTEAELVEALSALEMTLP-DLEEFTRKEIVL 173 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + F K + E+ + ++ + ++ +K + Sbjct: 174 STYIAEHFQTKASVSDEEVKKFYDDNLNTYFKKPESVKASHILVGTDEKATPEDRKKAKE 233 Query: 204 DAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 AE R + + ++ G ++ PQF+ K + Sbjct: 234 KAEALLKRLQAGEEFAALAKDESTCPSATQGGNLGEFGREEMVPQFEEAAFKLKPGEMSG 293 Query: 260 PYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T+ G I + K++ E ++K + K ++ + ++ KL+ A I Sbjct: 294 VVETKFGYHIIKVTGKQEAAAEKLESVKETIVEFLKKQKAQQELSSFIDKLKKEAKIE 351 >gi|307728470|ref|YP_003905694.1| SurA domain-containing protein [Burkholderia sp. CCGE1003] gi|307583005|gb|ADN56403.1| SurA domain protein [Burkholderia sp. CCGE1003] Length = 468 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 100/314 (31%), Gaps = 22/314 (7%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-------- 71 FV + ++ I +N VIT ++ +R+ L+ + Sbjct: 37 FVSVAPVQAQALAGNRGQTVDTIAAVVNNGVITRRELDERVGLIARRLNQQNAPVPPADQ 96 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L + + ++++E ++ Q+ ++ GI D V + A+ +S + + + ++ QG+ Sbjct: 97 LRQQVLNQMVLERIQLQKAKEVGINIDDAAVQKTLERLAQANNMSLDTYRARIEAQGVPW 156 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN----KQKMKNITVREYLIRTVLFSI 187 F + + + + K + E+ + T ++ L + Sbjct: 157 ATFTSDARTELTLSRLREKEVDSKVTVSDAEVANYIASQRGPNAGATSDLHMQHIFLKAP 216 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + + QK+ + + + G Y S L P+F Sbjct: 217 LNAPQTDIEAAQKKAEALLAEAKGGANFEKLAKSNSQAPDAGKGGDMGYASPSKLPPEFV 276 Query: 248 NLLKKSQNNTTNP--YVTQKGVEYIAICDKRD--------LGGEIALKAYLSAQNTPTKI 297 + NP T G E + + D+R ++ + Sbjct: 277 KAASSLRPGQVNPEVIRTNDGFEIVRLVDRRTGQGTSSDAPKLMQTHVRHILLRVGDGMS 336 Query: 298 EKHEAEYVKKLRSN 311 E + + +++ Sbjct: 337 EPQARQKLLEIKRE 350 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 16/145 (11%), Positives = 50/145 (34%), Gaps = 2/145 (1%) Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + + ++ ++++ + + ++ G Sbjct: 315 DAPKLMQTHVRHILLRVGDGMSEPQARQKLLEIKREIAAGGDFAKFAHTYSQDGSSSQGG 374 Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSA 290 ++ + P+F+ + ++P ++ G I + ++R+ G IA + Sbjct: 375 DLGWISPGETVPEFERAMNTLQDGQISDPVRSEYGYHLIQVLERREAQGSIAQQMDLARQ 434 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIH 315 K E+ A+++++LR A + Sbjct: 435 AIGQRKAEQAYADWLRELRDTAYVE 459 >gi|187922682|ref|YP_001894324.1| SurA domain [Burkholderia phytofirmans PsJN] gi|187713876|gb|ACD15100.1| SurA domain [Burkholderia phytofirmans PsJN] Length = 453 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 99/314 (31%), Gaps = 22/314 (7%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-------- 71 F+ + + S I +N VIT ++ +R++L+ + Sbjct: 22 FLSVAPVQAQALGGSSGQTVDTIAAVVNNGVITRRELDERMSLITRRLNQQNAPVPPLDQ 81 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L + + ++++E ++ Q+ ++ I D TV + A LS + + S ++ QG+ Sbjct: 82 LRQQVLNQMVLERIQLQKAKEDNINIDDATVQKTLERLAAANNLSLDVYRSRIEAQGVPW 141 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI---- 187 + F + + + + K + E+ + + Sbjct: 142 STFTSDARTELTLSRLREKEVDSKVTVSDAEVANYIASQRGPNAGATSDLHLQHIFLKAP 201 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + + Q++ + + + G ++ S L P+ Sbjct: 202 LNAPETDIEAAQQKAQALLAEAKGGANFDKLAKSNSQAPDASKGGDTGFVAPSKLPPEVV 261 Query: 248 NLLKKSQNNTTNP--YVTQKGVEYIAICDKRDLGGE--------IALKAYLSAQNTPTKI 297 + + NP T G E + + D+R G ++ + Sbjct: 262 KAVSTMRPGEVNPDLIRTNDGFEIVRLVDRRAGQGTSSDAPKLVQTHVRHILLRVGDGMS 321 Query: 298 EKHEAEYVKKLRSN 311 E + + +++ Sbjct: 322 EPQARQKLLEIKKE 335 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 14/145 (9%), Positives = 50/145 (34%), Gaps = 2/145 (1%) Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + + ++ ++++ + ++ ++ G Sbjct: 300 DAPKLVQTHVRHILLRVGDGMSEPQARQKLLEIKKEIAAGGDFAKFAHTYSQDGSSSQGG 359 Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSA 290 ++ + P+F+ + ++P ++ G I + +R+ G ++ + Sbjct: 360 DLGWISPGETVPEFERAMNNLQDGQISDPVRSEYGYHLIQVLGRRESEGSVSQQMDLARQ 419 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIH 315 K E+ A+++++LR A + Sbjct: 420 AIGQRKAEQAYADWLRELRDTAYVE 444 >gi|157368971|ref|YP_001476960.1| peptidyl-prolyl cis-trans isomerase SurA [Serratia proteamaculans 568] gi|157320735|gb|ABV39832.1| SurA domain [Serratia proteamaculans 568] Length = 432 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 105/309 (33%), Gaps = 16/309 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ + ++ + ++ ++ V+ + D+S + +KL L Sbjct: 7 LILGLVVCANTAFAAPQEVDKVAAVVDNGVVLESDVSTLLQSVKLNAQQAGQQLPDDKTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ ++ Q +K GI ++ A +S + S L +G+ N Sbjct: 67 RHQILERLIMDNIQLQMAKKMGINVSDADLDKAIGNIAAQNKMSIDQMRSRLAYEGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L E+ + ++ + + IP + Sbjct: 127 TYRSQIRKEMLISEVRNNEVRRRVTILPQEVDSLAAQVGAQNGSDTEMNISHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 +Q V A++ +++ + G + ++ F + Sbjct: 187 PSQAQVDDAEALAKKLMGEINGGADFGKLAISYSADSQALKGGNMGWGKLQEIPTLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 L+ + + P + G + + D R + ++ + + + Sbjct: 247 LVNAKKGDVVGPIRSGVGFHILKVNDIRGANQSVSVTEVHARHILLKPSVVLTDDQARAK 306 Query: 305 VKKLRSNAI 313 ++++ Sbjct: 307 LQEVAEAIK 315 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 87/285 (30%), Gaps = 17/285 (5%) Query: 47 NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 N EV I ++ A + Q + I+ LI + + + Sbjct: 143 NNEVRRRVTILPQEVDSLAAQVGAQNGSDTEMNIS-HILIPLPENPSQAQVDDAEALAKK 201 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-------FML 154 + A L+ + +G K +V Sbjct: 202 LMGEINGGADFGKLAISYSADSQALKGGNMGWGKLQEIPTLFAERLVNAKKGDVVGPIRS 261 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 G +++ + ++++V E R +L +Q K + AE + K Sbjct: 262 GVGFHILKVNDIRGANQSVSVTEVHARHILLKPSVVLTDDQA-RAKLQEVAEAIKSGRAK 320 Query: 215 DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAI 272 ++ ++ + + G + P F++ +K S+ + P + G I + Sbjct: 321 FADEAKQLSQDPGSALQGGDLGWASPDIYDPAFRDALMKLSKGEVSQPVHSSFGWHLIQL 380 Query: 273 CDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 D R + + A K K + ++++ R+ A + Sbjct: 381 LDTRQVDKTDAAQKDRAYRMLFNRKFAEEAQTWMQEQRAQAYVKI 425 >gi|298291093|ref|YP_003693032.1| SurA domain protein [Starkeya novella DSM 506] gi|296927604|gb|ADH88413.1| SurA domain protein [Starkeya novella DSM 506] Length = 326 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 58/301 (19%), Positives = 117/301 (38%), Gaps = 5/301 (1%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79 V + + ++ A + I + G+ IT D+++RI L +L + +K A+++ Sbjct: 26 LVAGMVAACALAAFPGAASAQGILVMVQGQPITSFDVAQRIKLAQLTERLSLSQKQALED 85 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 LI E LK E+ G+T D + + F + A +G + + + L + G+ K + Sbjct: 86 LIDERLKIITAERGGVTADKDEIEKMFARMANRSGRTPDQLTQALTQSGLDARMLKTKMR 145 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN---ITVREYLIRTVLFSIPDNKLQNQG 196 +W V+ + + ++ A Q R + + N Sbjct: 146 ADYVWNSYVRGRYSSAATVRDSDVFAALQTKGEDLTKAQRTTEYTIRQVVLVVGRTANPA 205 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 +R+ +A R + + + +D+ + ++ + Sbjct: 206 QRSQRMAEANSLRKSFTSCDG-GVATVRGMREAVVRDPVIRTSADMSEGVRKVMDSTPVG 264 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T P VT+ G+E +AIC +R++ GE A K + A + E + + R A+I Sbjct: 265 QLTPPEVTRAGIEMVAICARREVVGESAQKREVRADLETKQFEAVSKRLLAEARKGAMIQ 324 Query: 316 Y 316 Y Sbjct: 325 Y 325 >gi|116750899|ref|YP_847586.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophobacter fumaroxidans MPOB] gi|116699963|gb|ABK19151.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophobacter fumaroxidans MPOB] Length = 326 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 109/323 (33%), Gaps = 21/323 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI------ 68 + +L++FC++ + RI +NGE+I ++ +R+ L++ Sbjct: 2 RMAGCVLLVLFCVIAASGRCAADSLDRIVAVVNGEIILYSELQERLQLVQKSLPETRTND 61 Query: 69 ---NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 +E+ +Q++ E L +QE ++ IT V+ + +S + L Sbjct: 62 PARKAAIERELLQQMTREKLTEQEAKRLKITVTKKDVDEAIAFVMADHNVSQAQMEARLK 121 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN----ITVREYLIR 181 + G F++ L +++ K E +I A + + R Sbjct: 122 ESGQSMEEFRKVLTKDLERDRLLERVLKSKILISEKQIDAFLSQSPPEVRVEPRGKEEYR 181 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + +P + +KR ++ E +++ G ++ + Sbjct: 182 LGIIFLPASDGAEGKQAEKRAREIREKLKAGEDFAAMARQYSKGPAAQDGGDVGFVSLDE 241 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR-------DLGGEIALKAYLSAQNT 293 L P +N+ N ++ G + D R ++ Q Sbjct: 242 LAPFIAKNVKDLKINQPSDVVKGGDGYYIFLVTDVRRAEMQAAQNSPATNMRERARRQLY 301 Query: 294 PTKIEKHEAEYVKKLRSNAIIHY 316 ++ + E++K L S + + Sbjct: 302 QQEMARRFDEWIKDLESRSFVKI 324 >gi|145630363|ref|ZP_01786144.1| stationary-phase survival protein SurA [Haemophilus influenzae R3021] gi|144984098|gb|EDJ91535.1| stationary-phase survival protein SurA [Haemophilus influenzae R3021] Length = 311 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 113/316 (35%), Gaps = 20/316 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 + + + V++ S A R+ T++G + + + + Sbjct: 1 MKKFVLRSFLLATLGCVAFTSMAQAEERVVATVDGIPVLESQV-------RANMGKKGDR 53 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNT 113 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEI----------PANKQKMKNITVREYLIRTV 183 F+Q +A Q + V E+ K + + +EY +R + Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY-LLESDL 242 L + Q Q ++ + L+ + + G Y E+ Sbjct: 174 LLKLNPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPETYA 233 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHE 301 Q ++K Q + P+ T+ G + + RD + T+++ Sbjct: 234 PQFAQTVMKSKQGVISAPFKTEFGWHILEVTGVRDGDLTAEAYTQKAYERLVNTQLQDAT 293 Query: 302 AEYVKKLRSNAIIHYY 317 ++VK LR A I Y+ Sbjct: 294 NDWVKALRKRANIQYF 309 >gi|114319362|ref|YP_741045.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkalilimnicola ehrlichii MLHE-1] gi|122070615|sp|Q0AC82|SURA_ALHEH RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|114225756|gb|ABI55555.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkalilimnicola ehrlichii MLHE-1] Length = 433 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 36/272 (13%), Positives = 92/272 (33%), Gaps = 11/272 (4%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEKIAVQELIVETL 85 RI ++ +V+ ++ + +A + Q ++ ++ LI + + Sbjct: 26 ARAETLDRIVAVVDDQVVLASELERELATIANQLRSRGQRLPPRDVFQRQVLERLITQRV 85 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + ++ GIT D T++ + AR ++ F ++++G N+F++ + + Sbjct: 86 QLSRAQRVGITVDDATLDAAMQRMARQNNMTLGQFRQAVEQEGFEYNYFREGIREEIAIS 145 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + + + E+ + + + L ++ + ++RI+ Sbjct: 146 RLRQAQVEEQVTVTPQEVEEVLETLDDENQEYRLGHILVATPEAASTAQLEEARERIEQL 205 Query: 206 EESRLRLPKDCN-KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK--SQNNTTNPYV 262 E + D F+ + G + L S L F + + + Sbjct: 206 REQIIAGETDFEGAATAFSDAASAMEGGDLGWRLHSQLPSLFAEAIDEGLQAGEVSGVLQ 265 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 G + + D+R GGE + Sbjct: 266 NSSGFHLVKLMDQRTQGGERVTETRARHILIR 297 Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 53/155 (34%), Gaps = 3/155 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q+ + + D + + R++ E E + Sbjct: 273 VKLMDQRTQGGERVTETRARHILIRTDGDVITDEDARLRLRSLLERIEAGESFAELAEAY 332 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + G + L P+FQ + + + P+ + G + + D+R+ Sbjct: 333 SEDPGSAARGGDLGWTQPGQLVPEFQGAMDALEEGQISAPFASPFGWHIVQVTDRRERDV 392 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 L+ L+ Q K+E+ +++++LR A + Sbjct: 393 SRERLRDQLAQQIHQRKVEEAFEQWIRRLRDEAYV 427 >gi|330448801|ref|ZP_08312448.1| peptidyl-prolyl cis-trans isomerase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492992|dbj|GAA06945.1| peptidyl-prolyl cis-trans isomerase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 433 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 116/314 (36%), Gaps = 15/314 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------K 64 +K + ++ + S + ++ T+N VI D++ + + + Sbjct: 1 MKKWKYSVLSLMMMGMSATSMAAPQELDQVVMTVNDGVILQSDVNAMLKTVHLNAAEEHQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 N L + + +LI+E L+ Q+ ++ GI D + ++ A+ G++ + L Sbjct: 61 QLPPNDILRQQVMDKLIMENLQIQQAKQLGIRIDDSQLDQAIADVAKQRGITVDQLRQTL 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 K GI F++ + + + + L E+ A ++M T + Sbjct: 121 AKAGISYPMFREQMRNDMLASEARTVIVRKRVNILPQEVDALAKQMAKQTQQNVQYNISQ 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I ++ + K ++AE+ + +++ + G+ ++ + + Sbjct: 181 IQIRVDEDAEKAARDKAKQEAEDIVAQLKKGADFSQLAYRYSKGPKALKGGEWGWMSKEE 240 Query: 242 LHPQFQNLLKKSQNN-TTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297 + F + ++ + + P+ + G + I D + + ++ + + Sbjct: 241 MPTIFADQIQNNGKDAIIGPFRSGVGYHILKINDVKGMPSVSVVEVKARHILIKPSVILS 300 Query: 298 EKHEAEYVKKLRSN 311 + + ++++R Sbjct: 301 DAAAKKELEQIRQR 314 Score = 84.0 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 28/286 (9%), Positives = 84/286 (29%), Gaps = 7/286 (2%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL-IVETLKKQEIEKSGI 95 A +R I ++ + Q I+ ++ + E +K +K+ Sbjct: 140 ASEARTVIVRKRVNILPQEVDALAKQMAKQTQQNVQYNISQIQIRVDEDAEKAARDKAKQ 199 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLD--KQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + L + G + I + Sbjct: 200 EAEDIVAQLKKGADFSQLAYRYSKGPKALKGGEWGWMSKEEMPTIFADQIQNNGKDAIIG 259 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + I +V ++ I + + + +K ++ + + Sbjct: 260 PFRSGVGYHILKINDVKGMPSVSVVEVKARHILIKPSVILSDAAAKKELEQIRQRIISGK 319 Query: 214 K-DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270 + + ++ + G+ + + P F++ ++ + + P+ + G + Sbjct: 320 QSFAAAAKAYSQDPGSAANGGELGWQVPDMYAPAFKDKVETLPVDKISEPFKSAFGWHIV 379 Query: 271 AICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +R + + A+K + K + ++++LR+ A I Sbjct: 380 EVEGRRKVDRTDAAMKNRAAQILFNRKFNEEAQTWLQELRAGAYIE 425 >gi|148825262|ref|YP_001290015.1| stationary-phase survival protein SurA [Haemophilus influenzae PittEE] gi|148715422|gb|ABQ97632.1| stationary-phase survival protein SurA [Haemophilus influenzae PittEE] Length = 311 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 113/316 (35%), Gaps = 20/316 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 + + + V++ S A R+ T++G + + + + Sbjct: 1 MKKFILKSFLLATLGCVAFTSMAQAEERVVATVDGIPVLESQV-------RANMGKKGDR 53 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNA 113 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEI----------PANKQKMKNITVREYLIRTV 183 F+Q +A Q + V E+ K + + +EY +R + Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY-LLESDL 242 L + Q Q ++ + L+ + + G Y E+ Sbjct: 174 LLKLNPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPETYA 233 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHE 301 Q ++K Q + P+ T+ G + + RD + T+++ Sbjct: 234 PQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRDGDLTAEAYTQKAYERLVNTQLQDAT 293 Query: 302 AEYVKKLRSNAIIHYY 317 ++VK LR A I Y+ Sbjct: 294 NDWVKALRKRANIQYF 309 >gi|83648743|ref|YP_437178.1| parvulin-like peptidyl-prolyl isomerase [Hahella chejuensis KCTC 2396] gi|122070647|sp|Q2S9C1|SURA_HAHCH RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|83636786|gb|ABC32753.1| Parvulin-like peptidyl-prolyl isomerase [Hahella chejuensis KCTC 2396] Length = 434 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 36/290 (12%), Positives = 105/290 (36%), Gaps = 15/290 (5%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVETL 85 R+ +N +++ ++ R + +K + + L + + +L++E++ Sbjct: 29 AQVQELDRVVAVVNDDIVLYSELQDRASRIKDKLRQQKTPLPPEAVLHEKVLDQLVLESI 88 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + Q ++ GI + +N A+ G++ + F L ++G+ ++ + + I Sbjct: 89 QMQMADRGGIRVSDSQLNQTMQNIAKQNGMTLDQFQQALSEEGVTYQSAREQIRREMIIS 148 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 V + + E E+ + R I + + ++ Sbjct: 149 RVQQRSVDSRVRVTEKEVNDFLKSASAKEQRAEEYHLAHILIALPENPSDAQRKEAESKV 208 Query: 206 EESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPY 261 E+ R +L + + ++ G + + F ++ K + T+ P Sbjct: 209 EKIRSQLDQGVDFKQLAITYSDASTATQGGDLGWRKPDQVPSLFADVAPKLAPGQTSEPI 268 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT---KIEKHEAEYVKKL 308 GV ++A+ +KR ++ ++ + + E + ++++ Sbjct: 269 RNSSGVHFVAMLEKRGGVSKVVEQSKVRHILVQQNELRDEIAAKKLIEEI 318 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 17/145 (11%), Positives = 56/145 (38%), Gaps = 3/145 (2%) Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIG 232 + + + N+L+++ +K I++ + ++ + G Sbjct: 287 SKVVEQSKVRHILVQQNELRDEIAAKKLIEEIYGKVQAGEDFAELAKAYSDDAVSAAAGG 346 Query: 233 KAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSA 290 ++ D+ P+F +++++ + P+ + G + + D+R+ G+ + + Sbjct: 347 SLDWVNPGDMVPEFDQMMRETPVGAVSKPFQSTFGWHILQVQDRREADIGDRLMASQARQ 406 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIH 315 K E+ ++ ++R A + Sbjct: 407 VLHRRKYEEELQNWLSEIRDEAFVQ 431 >gi|255066985|ref|ZP_05318840.1| SurA/PPIASE domain protein [Neisseria sicca ATCC 29256] gi|255048810|gb|EET44274.1| SurA/PPIASE domain protein [Neisseria sicca ATCC 29256] Length = 331 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 86/286 (30%), Gaps = 17/286 (5%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIEK 92 S I + EVIT ++ IA + Q EL + + +L+ ++L Q ++ Sbjct: 54 SDGIAAIADNEVITQRQLAHAIAEARQHLPKGTQISEDELRQQVLAQLVNQSLIIQAGKR 113 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ Q SA+ D + + Q++ + Sbjct: 114 RNIQATDAEIDAVIAQTPSLKNPSAQTRREIADT------IIMEKVRQQAVMQ---NSRV 164 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 N +E + I + + I+ Sbjct: 165 SDAEVNSFIERARQQGVALPEGEPMRQYSAQHILIKADNDNAAAGAESTIRKIYAQARSG 224 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 +++ S G + + + F+ + K + P TQ G I Sbjct: 225 ADFAGLARQYSQDGSANSGGDLGWFADGMMVAPFEEAVHKLKPGQISPPVRTQFGWHIIK 284 Query: 272 ICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D RD E + + + K ++ A ++ L S A ++ Sbjct: 285 LNDVRDAGTPEERQRNAVRQYMSGQKAQQATANLLRDLHSGAYVNI 330 >gi|209519024|ref|ZP_03267832.1| SurA domain protein [Burkholderia sp. H160] gi|209500536|gb|EEA00584.1| SurA domain protein [Burkholderia sp. H160] Length = 478 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 43/341 (12%), Positives = 108/341 (31%), Gaps = 38/341 (11%) Query: 9 LSDFIKLLTTYFVLIIFC-------IVPIVSYKSWA--------MSSRIRTTINGEVITD 53 + F+ ++ + + +P+ S ++ A I +N VIT Sbjct: 20 IGVFVAIMKQLRLATLAAGLVAAASFLPVASVQAQALGGNGGGQTVDTIAAVVNNGVITQ 79 Query: 54 GDISKRIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 ++ +R L+ + L + + ++++E ++ Q+ ++ GIT D V Sbjct: 80 RELDERAGLIAHRLNQQNAPVPPMDQLRQQVLTQMVLERIQLQKAKEDGITIDDTAVERT 139 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + A+ ++ + + ++ QG+ F + + + + K + E+ Sbjct: 140 LERLAQANNMTLAMYRARIEAQGVPWTTFTNDARTELTLSRLREKEVDSKITVTDAEVAN 199 Query: 166 NKQKMKNITVREYLIRTVLFSIP----DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + + + + + QK+ + + Sbjct: 200 YIASQRGPGAGQTNDLHMQHIFVKAPLNAPETDIEAAQKKAEGLLAEAKGGADFEKLAKN 259 Query: 222 FASKIHD-VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKRDL 278 + + G +L S L P+F + NP T G E + + ++R Sbjct: 260 NSQAPDASKNGGDLGFLAPSKLPPEFVKAASGLRPGEINPDLIRTNDGFEIVRLVERRAG 319 Query: 279 GGE--------IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 G ++ + E + + +RS Sbjct: 320 QGNSSDAPKLVQTHVRHILLRVGDGLSEPQARQKLLDIRSQ 360 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 52/155 (33%), Gaps = 2/155 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 Q + + + ++ ++++ D + + Sbjct: 315 ERRAGQGNSSDAPKLVQTHVRHILLRVGDGLSEPQARQKLLDIRSQIAAGGEFEKFARTY 374 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G ++ + P+F+ + N ++P ++ G I + +RD G Sbjct: 375 SQDGSSSQGGDLGWISPGETVPEFERAMNSLQDNQISDPVRSEYGYHLIQVLGRRDAEGS 434 Query: 282 IALK-AYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 IA + K E+ A+++++LR A + Sbjct: 435 IAQQMDLARQAIGQRKAEQAYADWLRELRDTAYVE 469 >gi|145632724|ref|ZP_01788458.1| thymidylate kinase [Haemophilus influenzae 3655] gi|145634545|ref|ZP_01790254.1| stationary-phase survival protein SurA [Haemophilus influenzae PittAA] gi|229844382|ref|ZP_04464522.1| stationary-phase survival protein SurA [Haemophilus influenzae 6P18H1] gi|144986919|gb|EDJ93471.1| thymidylate kinase [Haemophilus influenzae 3655] gi|145268090|gb|EDK08085.1| stationary-phase survival protein SurA [Haemophilus influenzae PittAA] gi|229812631|gb|EEP48320.1| stationary-phase survival protein SurA [Haemophilus influenzae 6P18H1] Length = 311 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 113/316 (35%), Gaps = 20/316 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 + + + V++ S A R+ T++G + + + + Sbjct: 1 MKKFILKSFLLATLGCVAFASMAQAEERVVATVDGIPVLESQV-------RANMGKKGDR 53 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNA 113 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEI----------PANKQKMKNITVREYLIRTV 183 F+Q +A Q + V E+ K + + +EY +R + Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY-LLESDL 242 L + Q Q ++ + L+ + + G Y E+ Sbjct: 174 LLKLNPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPETYA 233 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHE 301 Q ++K Q + P+ T+ G + + RD + T+++ Sbjct: 234 PQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRDGDLTAEAYTQKAYERLVNTQLQDAT 293 Query: 302 AEYVKKLRSNAIIHYY 317 ++VK LR A I Y+ Sbjct: 294 NDWVKALRKRANIQYF 309 >gi|261867180|ref|YP_003255102.1| SurA [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412512|gb|ACX81883.1| SurA [Aggregatibacter actinomycetemcomitans D11S-1] Length = 310 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 99/314 (31%), Gaps = 19/314 (6%) Query: 16 LTTYFVLIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + ++F + + ++ T+NG I + + I + Sbjct: 1 MKMNLKSVLFAAIGFFVLAAHVHAEEKVVATVNGIPILESQVQSAI------NKKTNDRQ 54 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A+ ++I + L Q +++S + ++ ++ A GL+ LD QGI + Sbjct: 55 AALNKVIDDILVDQAVKESDVKVNNAQIDQIIEGIAAQNGLTFGQLLDALDYQGISYRAY 114 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA---------NKQKMKNITVREYLIRTVLF 185 +Q +A Q + +V + ++ + + Sbjct: 115 RQQIAQQVMMSEVRNHAISQSVDVSREQVEVLAKKMLDEAKAKGSVAQISDTQYEVRHIL 174 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY-LLESDLH 243 + L + + + + + + K++ + G Y E + Sbjct: 175 LKLNPLLNDAQAKAQLEQIRADIIVGKTTFADAALKYSKDYLSGANGGSLGYAFPEMYVG 234 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEA 302 P Q + + P+ T+ G + + + R Q +++ Sbjct: 235 PFNQAVRTTKPGVISAPFKTEFGWHILEVTNTRQADRTEDAYRQKAYEQIVNQQLQDSAL 294 Query: 303 EYVKKLRSNAIIHY 316 ++V+ LR A I Y Sbjct: 295 DWVQALRKRADIKY 308 >gi|88859123|ref|ZP_01133764.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Pseudoalteromonas tunicata D2] gi|88819349|gb|EAR29163.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Pseudoalteromonas tunicata D2] Length = 430 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 42/317 (13%), Positives = 106/317 (33%), Gaps = 19/317 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK----- 67 +KL T F ++ + + + ++ T+N V+ +I I +K + Sbjct: 1 MKLKTLVFTVLCTLGLNLPAVAKEVQIDKVVATVNEGVVLQSEIDTIINRVKSRALTDGQ 60 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + L A++ LI + L Q E+ G+ ++ + A+ G + D + Sbjct: 61 SLPTDDALRLQAIERLINQELLMQMSERMGLQISDAQLDQTLMMMAKEQGGTLADLRKTI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI---R 181 + G +++ + ++ V++++ + EI ++ Sbjct: 121 ESSGESYQAYREEMRVEMTTQQVLRSNVERRIYISLQEIENLLTILEQQGQTNEEYDIGH 180 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 ++ D Q + R + + + + + G+ ++ ++ Sbjct: 181 ILIDLPADGNAQEIEDAKVRAEKVIKLLNEGSEFKRIAIASSGGSKALEGGQLGWMSINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQ----NT 293 + F + + K P + G I + D R ++ ++ Q + Sbjct: 241 MPTLFAEAVKGKKAGEIVGPLRSGAGFHIIKVQDIRGRQVVETVEVRSRHILIQPSIILS 300 Query: 294 PTKIEKHEAEYVKKLRS 310 K A +VK L+ Sbjct: 301 EEKARSMLAGFVKDLKE 317 Score = 75.5 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 33/274 (12%), Positives = 77/274 (28%), Gaps = 9/274 (3%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I+ +I + +L+ Q E E LI E + V + + Sbjct: 154 ISLQEIENLLTILEQQGQTNE-EYDIGHILIDLPADGNAQEIEDAKVRAEKVIKLLNEGS 212 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM-----EIPA 165 ++ +G V G L I Sbjct: 213 EFKRIAIASSGGSKALEGGQLGWMSINEMPTLFAEAVKGKKAGEIVGPLRSGAGFHIIKV 272 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + + + + P L + ++ + ++++ Sbjct: 273 QDIRGRQVVETVEVRSRHILIQPSIILSEEKARSMLAGFVKDLKEGKADFATLAKEYSED 332 Query: 226 I-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL-GGEI 282 + G+ + S P F++ L ++ + P+ + G + + DKR E+ Sbjct: 333 QGSALKGGEYDWTDPSTYVPAFRDTLLSLEKDQLSEPFRSNYGWHIVQLLDKRIADKTEL 392 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A + K ++ + +++R A I Sbjct: 393 AKRNRAQQMLFNRKFKEESFAWQREMREQAHIEI 426 >gi|319898023|ref|YP_004136220.1| survival protein sura homolog [Haemophilus influenzae F3031] gi|317433529|emb|CBY81912.1| survival protein SurA homolog [Haemophilus influenzae F3031] Length = 311 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 113/316 (35%), Gaps = 20/316 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 + + + V++ S A R+ T++G + + + + Sbjct: 1 MKKFILKSFLLATLGCVAFASMAQAEERVVATVDGIPVLESQV-------RANMGKKGDR 53 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNA 113 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEI----------PANKQKMKNITVREYLIRTV 183 F+Q +A Q + V E+ K + + +EY +R + Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY-LLESDL 242 L + Q Q ++ + L+ + + G Y E+ Sbjct: 174 LLKLNPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPETYA 233 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHE 301 Q ++K Q + P+ T+ G + + RD + T+++ Sbjct: 234 PQFAQTVMKSKQGVISAPFKTEFGWHILEVTGVRDGDLTAEAYTQKAYERLVNTQLQDAT 293 Query: 302 AEYVKKLRSNAIIHYY 317 ++VK LR A I Y+ Sbjct: 294 KDWVKALRKRANIQYF 309 >gi|313669248|ref|YP_004049532.1| peptidyl-prolyl cis-trans isomerase [Neisseria lactamica ST-640] gi|313006710|emb|CBN88180.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria lactamica 020-06] Length = 359 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 37/286 (12%), Positives = 78/286 (27%), Gaps = 17/286 (5%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K G L + + +L+ ++L Q ++ Sbjct: 82 SDGIAAVADNEVITRRRLAQAVADAKANLPKGVQISDTALTEQVLMQLVNQSLIVQAGKR 141 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 + + + K V + + Sbjct: 142 R----NIQATEAEIDAVVAQNPALKNLSPAQRRELADNIIAEKVREQAVMQNSRVSEAEV 197 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 E + R I + + I+ + Sbjct: 198 DRFI-----EQAQKQGITLPEGEPLRQYRAQHILIKADGENAAVGAESTIRKIYDQARNG 252 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 +++ + G + + + F+ + + P TQ G I Sbjct: 253 TDFSGLARQYSQDAGAGNGGDLGWFSDGVMVAPFEAAVHALKPGQVSAPVRTQFGWHIIK 312 Query: 272 ICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + RD E ++ + K E+ AE ++ L S A I Sbjct: 313 LNEVRDAGTPEERIRNSVRQYIFQQKAEQATAELLRDLHSGAYIDI 358 >gi|328952685|ref|YP_004370019.1| SurA domain protein [Desulfobacca acetoxidans DSM 11109] gi|328453009|gb|AEB08838.1| SurA domain protein [Desulfobacca acetoxidans DSM 11109] Length = 316 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 109/313 (34%), Gaps = 11/313 (3%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-------K 67 L + + + + I +N EVIT ++ + + ++ K Sbjct: 2 RLIASLLFCACLAILPDGMAAAKIVDEIVAQVNDEVITLSELEQAMKYIQANPAAGAKVK 61 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF-SSFLDK 126 N + A++ LI L K+E ++ GIT + + G + ++ S L K Sbjct: 62 NNQAFRRQALEMLIDRKLAKEEAKRYGITVPEKEIKKTVDDIKQKYGFTDDETLSKALAK 121 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV-LF 185 G+ +Q L Q ++ + K + EI ++ I+ + L Sbjct: 122 DGMTMEQLRQQLIEQIQQDRLMLSTVRSKVKVSDAEIQQFYEQRYRQADNRVHIKIINLP 181 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 + + Q V+ + R +E ++ +V G Y+ +SD+ P+ Sbjct: 182 VAAGSSAEEQEEVRALAERILIQARRGESFDKLMETYSKSTPNVPGGDLGYIRQSDIDPR 241 Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAE 303 F L + P G + I + D + + + ++ K +E Sbjct: 242 FFEFLSNLRPGEIVPLRAPFGFQIIKMVDAKVGKAKSLSEARGEIEQILIREQMAKLFSE 301 Query: 304 YVKKLRSNAIIHY 316 Y++ +R A I Sbjct: 302 YLQSIRQKAHIKI 314 >gi|313200363|ref|YP_004039021.1| sura domain-containing protein [Methylovorus sp. MP688] gi|312439679|gb|ADQ83785.1| SurA domain protein [Methylovorus sp. MP688] Length = 438 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 40/315 (12%), Positives = 110/315 (34%), Gaps = 20/315 (6%) Query: 16 LTTYFVLIIFCIVPIVSYKSW----AMSSRIRTTINGEVITDGDISKRIALLKLQKING- 70 L L ++P V+ + RI ++ V+T+ +++ RI ++ Q Sbjct: 7 LMAGLFLWAGALLPHVAIAAQDGSVNKIDRIVAVVDQGVVTEKELNDRIEIVSAQLEKQG 66 Query: 71 -------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 LEK ++ LI + L+ Q ++G+ D + ++ ++ A + +F Sbjct: 67 NQLPPRNVLEKQILERLINDRLQLQYAAQTGLRVDDDQLDKTIMRIAEQNKMGVPEFKEA 126 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 L +GI F++ + + + + + + + E E+ + Sbjct: 127 LAAEGIVYKKFREDIRNEILLARLREREVDNRVNVTESEVDNFLTTQSSRQDSSDEYEIS 186 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL---EKFASKIHDVSIGKAQYLLES 240 I + + +++ + AE++ +L + + + + + GK + + Sbjct: 187 HILIRAPEDGSPEDLKRLREKAEDALKKLQAGEDFGQVSARVSDAPNALEGGKLGWKTAA 246 Query: 241 DLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPT 295 + F + L + + G + + D+R + ++ + + Sbjct: 247 QVPALFLEALKPMQVGQLSGILRSPNGFHILKLTDRRGGNTSTMVQQTHTRHILIKTSEV 306 Query: 296 KIEKHEAEYVKKLRS 310 E + ++ Sbjct: 307 LSETEAKRKIDGIKQ 321 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 16/144 (11%), Positives = 53/144 (36%), Gaps = 2/144 (1%) Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 + T I +++ ++ +++I ++ +++++ + G Sbjct: 288 STMVQQTHTRHILIKTSEVLSETEAKRKIDGIKQLIDNGEDFGEAAKRYSNDGSAANGGD 347 Query: 234 AQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQ 291 ++ D PQF+ + ++ + G I + ++R+ + + Sbjct: 348 LGWVNPGDTVPQFEKAMNALQPGQISDAVRSPFGWHLIQVLERRNQDMTREAERMKARQE 407 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIH 315 K ++ ++V++LR A + Sbjct: 408 IRQRKADEAYQDWVRELRDRAYVE 431 >gi|254251452|ref|ZP_04944770.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia dolosa AUO158] gi|124894061|gb|EAY67941.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia dolosa AUO158] Length = 454 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 99/306 (32%), Gaps = 24/306 (7%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVE 83 + ++ + +N +VIT ++ +R++L+ + L + ++++E Sbjct: 34 GSQGAQLADEVVAVVNNDVITGRELDQRVSLIARRLQQQNAPVPPADQLRAQVLNQMVLE 93 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 ++ Q+ + GI D TV + A+ G++ + + + L+ QG+ N F + + Sbjct: 94 RIQVQKAKDDGIRIDDATVQATLQRLAQANGMTLDQYRARLEAQGVPWNIFTNDARTELM 153 Query: 144 WPDVVKNDFMLKYGNLEMEIPAN----KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + K + E+ + + + + Q Sbjct: 154 LSKLREREVDSKITVSDAEVANYIASQRGPNAAQQQDLRFQHIFIKAPTNAPQTEIEAAQ 213 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 K+ + + + + G + L P K + N Sbjct: 214 KKAEALLQQAMSGADFEKLARNNSEANDAKKGGDLGFKSPGALPPDVVQAASKLRPGQVN 273 Query: 260 P--YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLR 309 P G E + + D+R G A ++ + K E + + +R Sbjct: 274 PTLIRVPDGFEIVRLVDRRPSQGATAAAPKIVQTHVRHILIRVGEGKSEGQARQELLDIR 333 Query: 310 SNAIIH 315 I Sbjct: 334 KQ--IE 337 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 31/285 (10%), Positives = 87/285 (30%), Gaps = 18/285 (6%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 IT D ++ + Q+ ++ + +K + + Sbjct: 163 DSKITVSD-AEVANYIASQRGPNAAQQQDL-RFQHIFIKAPTNAPQTEIEAAQKKAEALL 220 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN--------------DFM 153 Q A + + + + + + ++ PDVV+ Sbjct: 221 QQAMSGADFEKLARNNSEANDAKKGGDLGFKSPGALPPDVVQAASKLRPGQVNPTLIRVP 280 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + + + Q + I + +++G ++ + D + Sbjct: 281 DGFEIVRLVDRRPSQGATAAAPKIVQTHVRHILIRVGEGKSEGQARQELLDIRKQIEAGG 340 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 ++ G ++ + P+F+ + + P T+ G I + Sbjct: 341 DFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNSLQDGQISQPVRTEYGYHLIQV 400 Query: 273 CDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 D+R+ G + + + K E+ A+++++LR ++ + Y Sbjct: 401 LDRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSYVQY 445 >gi|323493622|ref|ZP_08098743.1| survival protein SurA [Vibrio brasiliensis LMG 20546] gi|323312145|gb|EGA65288.1| survival protein SurA [Vibrio brasiliensis LMG 20546] Length = 432 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 110/313 (35%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69 ++ + + ++ I +N V+ DI + LK Sbjct: 1 MRFWKHALLALCATSTLNTAHAEPVALDNIAVIVNSGVVLQSDIDTSLKTLKANAKKSGQ 60 Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + ++LIV+T+++QE ++ G+ D N +N + ARN + E S+ + Sbjct: 61 SLPSEQVLREQVTEKLIVDTIQQQEAQRIGVRIDDNRLNEAIEEIARNNQQTVEQLSASI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ F++ + + + + L E+ + T + Sbjct: 121 AQEGLSYAEFREQVRKEIAASEARNALVRRRINILPAEVDNLANILAKETNATVQYKIGH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + N ++ ++K+ + E ++ + G ++ + ++ Sbjct: 181 IQLRVNDGDDKSAIEKQAQQLVEKLKEGADFSTMAYTYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + + +++ + P+ + G + I D + + ++ + T ++ Sbjct: 241 IFADQINLQNKGSIIGPFRSGVGFHILKIEDVKGLETVAVTEVNARHILIKPTVILSDEG 300 Query: 301 EAEYVKKLRSNAI 313 + +K++ Sbjct: 301 VQKDLKEITQRIK 313 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 32/269 (11%), Positives = 79/269 (29%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ +L + KI +L V + + + Sbjct: 154 ILPAEVDNLANILAKETNATVQYKIGHIQLRVNDGDDKSAIEKQAQQLVEKLKEGADFST 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I + Sbjct: 214 MAYTYSKGPKALQGGDWGWMRKEEMPTIFADQINLQNKGSIIGPFRSGVGFHILKIEDVK 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKI-HD 228 TV + I + + VQK +K+ + + ++++ Sbjct: 274 GLETVAVTEVNARHILIKPTVILSDEGVQKDLKEITQRIKSGKATFAEMAQQYSQDPGSA 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ + + P+ T G + + D+R++ + ALK Sbjct: 334 AQDGELGYQTSEIYVPEFKHQVDTLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKN 393 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + + +++++R++A + Sbjct: 394 KAYRILFNRKFNEEASAWLQEIRASAYVE 422 >gi|27379215|ref|NP_770744.1| hypothetical protein bll4104 [Bradyrhizobium japonicum USDA 110] gi|27352366|dbj|BAC49369.1| bll4104 [Bradyrhizobium japonicum USDA 110] Length = 313 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 112/283 (39%), Gaps = 2/283 (0%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 + + I +NG+ ITD DI +R L L + + ELI + +K +E +K G+ Sbjct: 28 PSRAQNIVVMVNGDPITDFDIDQRSKLDLLTTQKTPSRQEVINELIDDRVKLKEGKKYGV 87 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + +N F A+ ++ + + L+ +G+ K + + +W +V+ F K Sbjct: 88 DPGVSDINQSFEGMAQRMRITTDQLTKSLEVKGVRPETLKARMKSEMVWTSLVRGRFKEK 147 Query: 156 YGNLEMEIPANKQKMKNITVREY-LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 E ++ Q ++ + + + Q+ E Sbjct: 148 LMVGERDVAQAVQAQAGDKLQIEGTEYKMQPIVLIVPRGSSPAFQETRMKEAEQYRSRVA 207 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAIC 273 C + + +I ++ ++L + +L + + T P VT+ G+E + +C Sbjct: 208 SCEEANSLFRSTPNATIRESVTKTTAELPEALRKVLDDTPIGHLTAPEVTKAGIEMVVLC 267 Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ + K + + K EK + Y+ +LR A+I Y Sbjct: 268 SRKPTMIDTPKKREVREKMYQEKYEKTQKAYLDELRKAAMIEY 310 >gi|315648234|ref|ZP_07901335.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus vortex V453] gi|315276880|gb|EFU40223.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus vortex V453] Length = 399 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 95/303 (31%), Gaps = 25/303 (8%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 ++ + + +V IV + + +N IT + + K Sbjct: 96 MIASLVLAAALIVVLIVPPFAKGSGNEAVAKVNDVKITKDTLYNELV--------EAGGK 147 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 V +I E L KQE+ K IT VN + S + F+ L + G+ Sbjct: 148 QTVNSMITEELIKQELAKQSITVTDAEVNEEVDALKASF-PSEDQFNMALQQSGMTLEDL 206 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 K Q ++ K + EI + K +R Sbjct: 207 KGQTKTQVELKKLM----GDKIKVTDEEIKTIYDQNKESFATPEQVRASHIL-------- 254 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-S 253 ++ + + ++ + G + ++ P F+ K Sbjct: 255 -VETKEEADEIVKQLKDGADFAAIAKEKNQDATKDTGGDLDFFGRGEMDPAFEEAAFKLK 313 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ ++P + G I + D+++ K + Q K+ + + Y+++L+ Sbjct: 314 KDEISDPVKSSFGYHIIKLTDRKEATNPTLEDKKVEIRKQLENQKVYQESSAYIQELKDK 373 Query: 312 AII 314 A I Sbjct: 374 ATI 376 >gi|239831518|ref|ZP_04679847.1| Chaperone surA precursor [Ochrobactrum intermedium LMG 3301] gi|239823785|gb|EEQ95353.1| Chaperone surA precursor [Ochrobactrum intermedium LMG 3301] Length = 336 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 131/318 (41%), Gaps = 8/318 (2%) Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63 K+ + F +L+ L V + S ++ ++G IT+ DI R+A L Sbjct: 17 KMMIARPLFASMLSAAVCLTTLGTVA-APAFAAGAGSEVKVIVSGNAITNSDIQHRVAFL 75 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 KLQ+ G L ++A QEL E LK+ E++ GI V+ + A +S + Sbjct: 76 KLQRKGGNLAQVAKQELTDEMLKRIEMKSRGIDISDRQVDEAYAGFATRNKMSLAQLNQL 135 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 +++ G+ +HFK+Y+ +Q W +V F E E K R Sbjct: 136 MNQSGVTPDHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKDGGKKPVATEYRLQ 195 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 + + + K + ++C+ + A I DV++ ++E L Sbjct: 196 QVIFVVPASKRSPALLAKRKQEANALRSRFQNCDATRQQAKGILDVTVRDLGRIIEQQLP 255 Query: 244 PQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ------NTPTK 296 ++ + + S TT P T+KGVE++A+C R + + + S + K Sbjct: 256 NEWSKAIKSTSVGGTTPPQETEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKK 315 Query: 297 IEKHEAEYVKKLRSNAII 314 E+ +Y+ +LR A I Sbjct: 316 AEQLSEKYLGELREKAKI 333 >gi|307249622|ref|ZP_07531608.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858320|gb|EFM90390.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 316 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 105/316 (33%), Gaps = 15/316 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +KL++ +L+ +S + A+ R+ ++G + + + + L + + Sbjct: 1 MKLISAKSLLVALVTAIGISQTATAIEERVVALVDGVPVMESQVQRA---LGKKANSEAN 57 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 K A++++I + L ++ ++++G+ + V+ A G++ LD QGI Sbjct: 58 HKAALEQIIDDLLVQKAVKEAGVKVNYAKVDQVIEDIAARNGITYGQLLDALDYQGITLE 117 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--------YLIRTVL 184 ++Q +A Q V ++ A +++ R Sbjct: 118 QYRQQIAQQMAMEQVRHISIGKSIQVDPKDVHAYAKELLEKDKANGKLKNVTGVQHRVSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK--FASKIHDVSIGKAQYLLESDL 242 I + N + ++ + K + G Y Sbjct: 178 ILIKTTPVLNDIQAKAKLAQIVADIKAGKTTFEEAAKANSVDYLSAADGGDLGYNFLDIY 237 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKH 300 P F + Q T P+ +Q G + + + Q + ++ Sbjct: 238 DPAFAKAASTAKQEQITAPFKSQFGWHILKVTGTQQGDRTEDAYNQRAYEQLVDKQAQEA 297 Query: 301 EAEYVKKLRSNAIIHY 316 ++VK LR A + Y Sbjct: 298 AKDWVKALRKTADVQY 313 >gi|34499685|ref|NP_903900.1| survival protein surA [Chromobacterium violaceum ATCC 12472] gi|81711632|sp|Q7NQB0|SURA_CHRVO RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|34105536|gb|AAQ61890.1| survival protein surA precursor [Chromobacterium violaceum ATCC 12472] Length = 429 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 109/314 (34%), Gaps = 15/314 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQK---- 67 +K ++ + + + RI +N VIT ++ R+ Q Sbjct: 1 MKKTLLALLIASVMQSALAAPATPVREVDRIVAVVNKNVITWQELQARVNEAIKQLEAQK 60 Query: 68 ----INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 LE+ ++++I E ++ Q G+ + V+ A+ LS + Sbjct: 61 VAPPPREVLERQVLEQMITEEVQLQYAASGGLRIEDAAVDQAVANLAKQNKLSEAGLKAQ 120 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 L K GI + + + + + ++ + + E+ + ++ EY + ++ Sbjct: 121 LAKDGITLDRLRADIRRELTISRLRDSEVASRVNVSDSEVDQAMKSAQSANRTEYHLASI 180 Query: 184 LFSIPDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 L ++P+ Q + +++ A+ ++ + + G + + L Sbjct: 181 LVAVPERADAKQIDQLSQKVHKAQADLAAGQPFAKVSAAYSDAPNALKGGDMGWRSATSL 240 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKI 297 +F Q L + T+ TQ+G + DKR + E ++ + Sbjct: 241 PQEFVQLLEQMKVGADTDVIRTQQGFFIFKLVDKRSGGAPMMVEQYHPRHILIRTNEAVS 300 Query: 298 EKHEAEYVKKLRSN 311 E + ++R Sbjct: 301 EADAKARIDQVRDR 314 Score = 107 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 34/286 (11%), Positives = 87/286 (30%), Gaps = 19/286 (6%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQELIVETLKKQEIE 91 S + + +N ++D ++ + + + + + A + I + +K Sbjct: 147 SEVASRVN---VSDSEVDQAMKSAQSANRTEYHLASILVAVPERADAKQIDQLSQKVHKA 203 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 ++ + L D + DV++ Sbjct: 204 QADLAAGQPFAKVSAAYSDAPNALKGGDMGWRSATSLPQEFVQLLEQMKVGADTDVIRTQ 263 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 ++ + I N+ ++ + RI + +R Sbjct: 264 QGFFI------FKLVDKRSGGAPMMVEQYHPRHILIRTNEAVSEADAKARIDQVRDRIMR 317 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270 K + + ++ + G ++ DL P+F+ + + P T G I Sbjct: 318 GAKFADMAKLYSEDGSNAKGGDLGWVNMGDLVPEFEKAMVSLPIGQVSQPVRTPFGWHLI 377 Query: 271 AICDKRDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + KR+ + + Q K+E+ ++V++LR +A + Sbjct: 378 LVEGKRNQDVSSDHEKMAVKQQIRARKMEQAYTDWVRQLRDSAFVE 423 >gi|261364046|ref|ZP_05976929.1| SurA/PPIASE domain protein [Neisseria mucosa ATCC 25996] gi|288568080|gb|EFC89640.1| SurA/PPIASE domain protein [Neisseria mucosa ATCC 25996] Length = 328 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 79/286 (27%), Gaps = 17/286 (5%) Query: 39 SSRIRTTINGEVITDGDISKRIALLK------LQKINGELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ + + Q + EL + + +LI ++L Q ++ Sbjct: 51 SDGIAAIADNEVITRRQLAQAVERARRTIPKGTQIGDNELREQVLAQLINQSLIVQAGKR 110 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 + N +S + K V + Sbjct: 111 ----KNIQADNAEIEAVIAANPSLKTPSASIRREIADSIIAEKVRQQAVMQHSRVSDAEV 166 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 E + I + + I+ Sbjct: 167 ARAI-----EQAKQQGIALPEGEPLRQYNAQHILIKADNENAAAGAESTIRKIYAQARSG 221 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 +++ S G + + + P F+ + K + P TQ G I Sbjct: 222 ADFAGLARQYSQDGSASSGGNLGWFADGMMVPPFEEAVHKLKPGQVSPPVRTQFGWHIIK 281 Query: 272 ICDKRDLGGEIALK-AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D RD G + + + K E+ E +++L A I Sbjct: 282 LNDVRDAGTPEERQHNTIRQYLSRQKAEQAEINLLRELHEGAHIDI 327 >gi|186475166|ref|YP_001856636.1| SurA domain-containing protein [Burkholderia phymatum STM815] gi|184191625|gb|ACC69590.1| SurA domain protein [Burkholderia phymatum STM815] Length = 463 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 103/321 (32%), Gaps = 25/321 (7%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING------- 70 + + + S I +N VIT ++ R+ L+ + Sbjct: 21 SILLAGPAHAQALNGSGSAQTVDTIAAVVNNGVITQRELDMRVGLITKRLNQQHAPIPPA 80 Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 +L + + ++++E ++ Q+ + GIT D TV + A+ L + + + ++ QG+ Sbjct: 81 DQLRQQVLNQMVLERIQLQKAREDGITVDDATVQRTLERLAQANNLQLDMYRARIEAQGV 140 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT----VREYLIRTVLF 185 F + I + + + K + E+ + T +L L Sbjct: 141 PWTTFMGDAKTELILSRLREKEVDSKVTVSDAEVANYIASQRGPTAGLASDLHLEHIFLK 200 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 + + + Q + + L+ + + G + S L + Sbjct: 201 APLNASQTDIEAAQAKANALLQEALKGDNFGKLAKSNSQAPDASKGGDLGFQAPSRLPAE 260 Query: 246 FQNLLKKSQNNTTNP--YVTQKGVEYIAICDKRDLGGEIALK---------AYLSAQNTP 294 F + NP T G E + + ++R G + ++ + Sbjct: 261 FVTAAATLRPGQVNPSVIRTNDGFEIVRLVERRSGQGSASADSTKLVQTHVRHILLRVGD 320 Query: 295 TKIEKHEAEYVKKLRSNAIIH 315 E + + ++R I Sbjct: 321 GMSEPQARQKLLEIRQE--IE 339 Score = 102 bits (252), Expect = 9e-20, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 49/139 (35%), Gaps = 2/139 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + + + QK ++ +E ++ G ++ Sbjct: 310 HVRHILLRVGDGMSEPQARQKLLEIRQEIEAGQGDFDKFARTYSQDGSASQGGDLGWISP 369 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSAQNTPTKI 297 + P+F+ + N + P ++ G I + +R+ G ++ + K Sbjct: 370 GETVPEFERAMNSLQDNQISQPVRSEYGYHLIQVLGRREAEGSVSQQMDLARQAIGQRKA 429 Query: 298 EKHEAEYVKKLRSNAIIHY 316 E+ A+++++LR A + Y Sbjct: 430 EQAYADWLRELRDTAYVDY 448 >gi|307132630|ref|YP_003884646.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Dickeya dadantii 3937] gi|306530159|gb|ADN00090.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Dickeya dadantii 3937] Length = 430 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 105/309 (33%), Gaps = 16/309 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ + +++ + ++I ++ V+ + DI+ + +KL L Sbjct: 7 LVLGLALSANMAFAAPQEVNKIAAVVDNSVVLESDINSLLQSVKLNAQEAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A +S + S L +G+ + Sbjct: 67 RHQILERLIMDNIILQMAQKMGVQVTDEQLDRSIANIAAQNRMSVDQLRSRLAAEGVSFD 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + I +V ++ + L E+ + Q++ + + IP + Sbjct: 127 TYRSQIRKDMIIAEVRNSEVRRRVTVLPQEVDSLAQQIASQGASGPEVNLSQILIPLPEN 186 Query: 193 QNQGFVQKRIKDAE---ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 Q V K A + + +++ + G+ + +L F + Sbjct: 187 PTQDQVDKAESLANRLVKEASQGADFGKLAITYSADPQALKGGQMGWGRPQELPSLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 L + P + G + + D R + ++ + + + Sbjct: 247 LTNPQKGQVIGPIRSGVGFHILRVNDTRGGDQSVSVTEVHARHILLRTSVVMNDAQARAR 306 Query: 305 VKKLRSNAI 313 ++ + S Sbjct: 307 LEDIASQIK 315 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 86/309 (27%), Gaps = 26/309 (8%) Query: 28 VPIVSYKSWAMSSRIRTTI-NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELI 81 V +Y+S I + N EV + ++ + Q +G L Sbjct: 123 VSFDTYRSQIRKDMIIAEVRNSEVRRRVTVLPQEVDSLAQQIASQGASGPEVN-----LS 177 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + E + ++ V+ A + ++ + Q Sbjct: 178 QILIPLPENPTQDQVDKAESLANRLVKEASQGADFGKLAITYSADPQALKGGQMGWGRPQ 237 Query: 142 SIWPDVVKND-----------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + + G + + + ++++V E R +L Sbjct: 238 ELPSLFAERLTNPQKGQVIGPIRSGVGFHILRVNDTRGGDQSVSVTEVHARHILLRTSVV 297 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL 249 Q + ++ +L N ++ + G + P F++ Sbjct: 298 MNDAQARARLEDIASQIKSGKLSFT-NAAKQLSQDPGTANQGGDLGWSSPDMYDPSFRDA 356 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + + P + G I + D R + + A K K + ++++ Sbjct: 357 LTQLKKGEISAPVHSSFGWHLIQLLDTRQVDKTDAAQKDRAYRMLFNRKFAEEAQTWMQE 416 Query: 308 LRSNAIIHY 316 R+ A + Sbjct: 417 KRAAAYVKI 425 >gi|209693973|ref|YP_002261901.1| chaperone SurA precursor [Aliivibrio salmonicida LFI1238] gi|208007924|emb|CAQ78055.1| chaperone SurA precursor [Aliivibrio salmonicida LFI1238] Length = 436 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 107/317 (33%), Gaps = 16/317 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +K F+ + ++ I + + R+ ++ V+ DI + +K+ Sbjct: 1 MKNWKIPFISSLLLMLTINVHAAPVELDRVIAIVDEGVVLQSDIETSLKTVKINAQEKGQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LI++T++ Q+ EK GI D + A++ ++ Sbjct: 61 PLPEENVLREQVLEKLILDTIQSQQAEKMGIRIDDTRLEEALNNIAKDNKMTLAQLQQKA 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 QG+ F++ + + + + L E+ + + T + Sbjct: 121 ASQGLAYADFREQIRKEIAASEARNAQVRRRINILPQEVESLALLLSEETQATVQYKISH 180 Query: 185 FSIPDN--KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + + + ++K+ + E + ++ + G ++ + ++ Sbjct: 181 IQLRTDGATQAEKEALEKQALELTERLKQGADFATMAYTYSKGPKALQGGDWGWMRKEEM 240 Query: 243 HPQFQNLLKKSQN-NTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIE 298 F + + + P+ + G I I D + + ++ + + + Sbjct: 241 PTIFADQITGQGKSSIIGPFRSGVGFHIIKIDDVKGLETVAVTEVNARHILVKTSVIMSD 300 Query: 299 KHEAEYVKKLRSNAIIH 315 + + ++ + I Sbjct: 301 EGAERLLNQI--TSDIE 315 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 14/142 (9%), Positives = 46/142 (32%), Gaps = 4/142 (2%) Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY 236 R +L + + ++++ + G+ + Sbjct: 285 VNARHILVKTSVIMSDEGAER-LLNQITSDIESGKETFAAMAQRYSQDPGSAAANGELGF 343 Query: 237 LLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTP 294 P+F++ ++ + P+ T G + ++R + + A+K Sbjct: 344 QTPDLYVPEFKHQVEILPVGQISKPFKTVHGWHIAEVLERRQVDRTDAAMKNKAYRILMN 403 Query: 295 TKIEKHEAEYVKKLRSNAIIHY 316 K + +++++R++A + Sbjct: 404 RKFNEESGAWLQEIRASAYVEI 425 >gi|260775523|ref|ZP_05884420.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio coralliilyticus ATCC BAA-450] gi|260608704|gb|EEX34869.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio coralliilyticus ATCC BAA-450] Length = 431 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 109/313 (34%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +KL + +I ++ +N V+ DI + ++ Sbjct: 1 MKLWKQTLLGLIAASQLSFVQAEPVELDKVAVIVNSGVVLQSDIETSLKTIRANAKKNNQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + ++LIV+T+++QE E+ G+ D N +N + A+N + + ++ + Sbjct: 61 SLPDEATLREQVTEKLIVDTIQQQEAERIGVRIDDNRLNEAIDEIAKNNNQTLQQLNTSI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ F++ + + + + L E+ + T + Sbjct: 121 AEEGLSYAQFREQVRKEIAANEARNALVRRRINILPAEVDNLANILAKETNATVQYKIGH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + N ++ ++++ + + ++ + G ++ + ++ Sbjct: 181 IQLRVNDGDDKAAIEEKANQIVKELNQGSDFSTMAYTYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + + +++ + P+ + G + I D + + ++ + T ++ Sbjct: 241 IFADQINLQNKGSIIGPFRSGVGFHILKIEDVKGLETVAVTEVNARHILIKPTVILSDEG 300 Query: 301 EAEYVKKLRSNAI 313 + + + Sbjct: 301 VQKELLDITRRIQ 313 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 78/269 (28%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ +L + KI +L V + + +N Sbjct: 154 ILPAEVDNLANILAKETNATVQYKIGHIQLRVNDGDDKAAIEEKANQIVKELNQGSDFST 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I + Sbjct: 214 MAYTYSKGPKALQGGDWGWMRKEEMPTIFADQINLQNKGSIIGPFRSGVGFHILKIEDVK 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKI-HD 228 TV + I + + VQK + D + ++++ Sbjct: 274 GLETVAVTEVNARHILIKPTVILSDEGVQKELLDITRRIQSGKATFAEMAQQYSQDPGSA 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ + + P+ T G + + D+R++ + ALK Sbjct: 334 AQQGELGYQTSDLYVPEFKHQVDTLPVGQISEPFKTVHGWHIVEVMDRREVDRTDSALKN 393 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + + +++++R++A + Sbjct: 394 KAYRIIFNRKFNEEASAWLQEIRASAFVE 422 >gi|78222152|ref|YP_383899.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter metallireducens GS-15] gi|78193407|gb|ABB31174.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter metallireducens GS-15] Length = 330 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 104/327 (31%), Gaps = 17/327 (5%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + + S L + + + VS + ++ +NG I + + +A L Sbjct: 1 MRLNRSLTFGLFLLGVMFTLHLLQTPVSADEVNKTGKVVARVNGVPIYENALQSHLAALA 60 Query: 65 LQKI-----------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 + N +K A+ LI L +Q + +T V+ + Sbjct: 61 NKGRASGFARDPAKMNDYQKKKALYSLIDAELLRQASNQQQVTDLDAKVSKRLQEVKGKF 120 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 + + G + F L + + + + ++ + EI + Sbjct: 121 PDEEAFLKNLQAR-GKTLDIFVAELRDGIRYDEYLTSKKVIGVPVPDEEIQKFYRDNPTS 179 Query: 174 T--VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 + +R +L + + +K+ + +R ++ ++ S Sbjct: 180 FSVPEQIKVRHILIEPDGSTAEAVAKAEKKAGEIRNRVVRDKDFAAVAKEVSACSTASSG 239 Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYL 288 G Y+ + +F + N + P T+ G + + DK+ + ++ ++ Sbjct: 240 GDLGYVSRGTMPAEFDKVAFSLKLNEVSEPVRTKFGFHIMEVLDKKPVTVRPYSEVREFI 299 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIH 315 S EK + +LR A I Sbjct: 300 SRYLQRFDDEKRLNAHTLELRKKATIE 326 >gi|170699177|ref|ZP_02890230.1| SurA domain [Burkholderia ambifaria IOP40-10] gi|170135902|gb|EDT04177.1| SurA domain [Burkholderia ambifaria IOP40-10] Length = 452 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 100/299 (33%), Gaps = 22/299 (7%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVETLK 86 ++ + +N +VIT ++ +R+ L+ + L + ++++E ++ Sbjct: 35 GAQLADEVVAVVNNDVITGRELDQRVGLIARRLQQQNAPVPPADQLRAQVLNQMVLERIQ 94 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 Q+ + GI D TV + A+ G++ E + + L+ QG+ + F + + Sbjct: 95 VQKAKDDGIRIDDATVQSTLQRLAQANGMTLEQYRARLEAQGVPWSVFTSDARTELMLSK 154 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMK----NITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + K + E+ + + + + + QK+ Sbjct: 155 LREREVDGKITVSDAEVVNYIASQRGPSASQQQDLRFQHIFIKAPTNAPQAEIEVAQKKA 214 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP-- 260 + + + + G + L P+ + K + NP Sbjct: 215 EALLQQATFGADFEKLAKNNSEANDAKKGGDLGFKAPGALPPEVVDAASKLRPGQVNPTL 274 Query: 261 YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLRSN 311 G E + + D+R G A ++ + K E + ++ +R Sbjct: 275 IRVPDGFEIVRLVDRRQSQGTSAAAPKIVQTHVRHILLRVGEGKSEGQARQQLQDIRRQ 333 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 31/287 (10%), Positives = 91/287 (31%), Gaps = 19/287 (6%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 ++G+ IT D ++ + + Q+ ++ + +K + Sbjct: 160 VDGK-ITVSD-AEVVNYIASQRGPSASQQQDL-RFQHIFIKAPTNAPQAEIEVAQKKAEA 216 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN--------------D 151 +Q A + + + + A ++ P+VV Sbjct: 217 LLQQATFGADFEKLAKNNSEANDAKKGGDLGFKAPGALPPEVVDAASKLRPGQVNPTLIR 276 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + + Q + + + +++G +++++D Sbjct: 277 VPDGFEIVRLVDRRQSQGTSAAAPKIVQTHVRHILLRVGEGKSEGQARQQLQDIRRQVEA 336 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 ++ G ++ + P+F+ + + P T+ G I Sbjct: 337 GGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQDGQISQPVRTEYGYHLI 396 Query: 271 AICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D+R+ G + + + K E+ A+++++LR ++ + Y Sbjct: 397 QVIDRRESEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSYVQY 443 >gi|303245475|ref|ZP_07331759.1| SurA domain protein [Desulfovibrio fructosovorans JJ] gi|302493324|gb|EFL53186.1| SurA domain protein [Desulfovibrio fructosovorans JJ] Length = 339 Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 102/305 (33%), Gaps = 25/305 (8%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN----------GELEKIAVQELIVET 84 + + R+ +NG++IT D+ R+A L + EL + ++ +I + Sbjct: 33 ATQLVDRVVAVVNGKLITLFDLDSRVAELVQRTQGISFAPGDPRAEELRRQVLESMINDI 92 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 L +QE + I ++ + + L+ F + L K+G+ F++ + ++ Sbjct: 93 LIEQEAARLKINVSETELDSQIDELKKKNNLTQAQFQAELAKEGLTLKEFRKRMREDNMK 152 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 ++ K + EI +K K I S + + ++ + Sbjct: 153 KRLLGFMVHRKVLVTDDEIRDYYEKHKATLSTTKSILGPKVSGNISFIMVP-TKKQAEEL 211 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVT 263 ++ + KF+ G + DL P L + P + Sbjct: 212 RQKIGAGTITFADAARKFSIGPGRDQGGDLGDVQVKDLAPPLRDALTAVPAGQVSQPVML 271 Query: 264 QKGVEYIAICDKRDL-------------GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + + ++ +++ + K +K +Y+ LRS Sbjct: 272 DGKAVLLKLRTGKNAAPAKTPQPAPSAGPSFESVRNQIQEMLYKQKFDKLFQDYMDNLRS 331 Query: 311 NAIIH 315 A+I Sbjct: 332 KAVIE 336 >gi|323524758|ref|YP_004226911.1| SurA domain-containing protein [Burkholderia sp. CCGE1001] gi|323381760|gb|ADX53851.1| SurA domain protein [Burkholderia sp. CCGE1001] Length = 468 Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats. Identities = 43/316 (13%), Positives = 101/316 (31%), Gaps = 22/316 (6%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-------- 71 FV + ++ I +N VIT ++ +R+ L+ + Sbjct: 37 FVSVAPVQAQALAGNRGQTVDTIAAVVNNGVITRRELDERVNLITRRLNQQNAPIPPADQ 96 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L + + ++++E ++ Q+ ++ GI D V + A+ LS + + + ++ QG+ Sbjct: 97 LRQQVLNQMVLERIQLQKAKEDGINVDDAAVQKTLERLAQANNLSLDVYRARIEAQGVPW 156 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN----KQKMKNITVREYLIRTVLFSI 187 F + + + + K + E+ + T ++ L + Sbjct: 157 ATFTSDARTELTLSRLREKEVDSKVTVSDAEVANYIASQRGPNAGATSDLHMEHIFLKAP 216 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + + QK+ + + + G Y S L P+F Sbjct: 217 LNAPQTDIEAAQKKAEALLAEAKGGANFGKLAKSNSQAPDAAKGGDMGYAAPSKLPPEFV 276 Query: 248 NLLKKSQNNTTNP--YVTQKGVEYIAICDKRDLGGE--------IALKAYLSAQNTPTKI 297 + NP T G E + + D+R G ++ + Sbjct: 277 KAASALRPGEVNPEVIRTNDGFEVVRLVDRRAGQGTSSDAPKLVQTHVRHILLRVGDGMS 336 Query: 298 EKHEAEYVKKLRSNAI 313 E + + +++ Sbjct: 337 EPQARQKLLEIKKEIQ 352 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 16/145 (11%), Positives = 51/145 (35%), Gaps = 2/145 (1%) Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + + ++ ++++ + ++ ++ G Sbjct: 315 DAPKLVQTHVRHILLRVGDGMSEPQARQKLLEIKKEIQAGGDFAKFAHTYSQDGSSSQGG 374 Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSA 290 ++ + P+F+ + ++P ++ G I + ++R+ G IA + Sbjct: 375 DLGWISPGETVPEFERAMNTLQDGQISDPVRSEYGYHLIQVLERREAQGSIAQQMDLARQ 434 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIH 315 K E+ A+++++LR A + Sbjct: 435 AIGQRKAEQAYADWLRELRDTAYVE 459 >gi|94266120|ref|ZP_01289835.1| PpiC-type peptidyl-prolyl cis-trans isomerase [delta proteobacterium MLMS-1] gi|93453317|gb|EAT03757.1| PpiC-type peptidyl-prolyl cis-trans isomerase [delta proteobacterium MLMS-1] Length = 335 Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 108/294 (36%), Gaps = 19/294 (6%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKING-----------ELEKIAVQELIVETLKKQ 88 R+ +NGE+IT ++ + +A ++ Q + E + + +I L +Q Sbjct: 38 DRVVAEVNGEIITMSELEREMAGVEQQVLQQAPAADREQALTEARQQVLSGMIDRLLARQ 97 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 + ++ GI V+ Q + ++ E+ + + + ++++ L Q + ++ Sbjct: 98 QADRLGIRVGEREVDEAIAQILADNRITMEELEAEIARHHGSMENYRRDLQTQILQSRLL 157 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + E I Q+ +L + + ++ + AEE Sbjct: 158 SQEVRERVVIPERRIKEYYQQHHQEQTSPEEAYHILQIGFNWPPGDDEAREQARRQAEEI 217 Query: 209 RLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQ 264 + + + +++ + G + +L +++ + + T Sbjct: 218 HRQARQGADFRELARRYSDLPSARNDGDLGVFQKDELAGIMLEHIPELEPGEISTILETA 277 Query: 265 KGVEYIAIC----DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 G ++ + + R G LK + + +E+ +++VK+LR N I Sbjct: 278 AGYQFFKLLSNQGELRATGSYEELKGKIREKLYQQALEEQFSKWVKELRENDYI 331 >gi|219870954|ref|YP_002475329.1| peptidyl-prolyl cis-trans isomerase SurA [Haemophilus parasuis SH0165] gi|219691158|gb|ACL32381.1| peptidyl-prolyl cis-trans isomerase SurA [Haemophilus parasuis SH0165] Length = 312 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 110/315 (34%), Gaps = 15/315 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + T + + ++ S R+ T++G I + + L + K Sbjct: 1 MKFTQVKSLFIAGFALFAFSSANAEERVVATVDGYPIMQSQVKQA---LGKKANTEANRK 57 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A++ +I + + ++ I++SGI D V+ A G++ LD QGI + + Sbjct: 58 AALETIIDDFVVQRAIKESGIKVDYAYVDQMMEDVAAQNGITYGQLLDALDYQGISLSQY 117 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE----------YLIRTVL 184 +Q LA Q + V + ++ + + M + Y I +L Sbjct: 118 RQQLAHQLLMEQVRQQSIGNSIQVDPKDVQSLAKDMLDKAKTNGTLETVSATEYRISHIL 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 Q + A+ ++ + I + G + Sbjct: 178 IKTTPILNDMQAKAKLLSITADIKSGKITFEEAAKINSVDYISGIDGGDLGFNFLDAYDS 237 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICD-KRDLGGEIALKAYLSAQNTPTKIEKHEA 302 F N+ K + ++P+ +Q G + + D +R E A Q +++ Sbjct: 238 TFANIASKSKIDVISSPFKSQFGWHILKVTDTRRGDRTEDAYLQKAYEQLIDKQVQVASK 297 Query: 303 EYVKKLRSNAIIHYY 317 +++K LRS I Y+ Sbjct: 298 DWIKVLRSKLDIKYF 312 >gi|270263924|ref|ZP_06192192.1| chaperone SurA, precursor [Serratia odorifera 4Rx13] gi|270042117|gb|EFA15213.1| chaperone SurA, precursor [Serratia odorifera 4Rx13] Length = 432 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 105/309 (33%), Gaps = 16/309 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ + ++ + ++ ++ V+ + D++ + +KL L Sbjct: 7 LILGLVVCANTAFAAPQEVDKVAAVVDNGVVLESDVNSLLQSVKLNAQQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ ++ Q +K GI ++ A +S + S L +G+ N Sbjct: 67 RHQILERLIMDNIQLQMAKKMGIAVSDADLDKAIGNIAAQNKMSIDQMRSRLAYEGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L E+ A +++ + + IP + Sbjct: 127 TYRSQIRKEMLISEVRNNEVRRRVTILPQEVDALAKQVGAQNGSDTEMNISHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 +Q V + A++ +++ + G + ++ F + Sbjct: 187 PSQQQVDEAEALAKKLMGEINGGADFGKLAISYSADSQALKGGNMGWGKLQEIPTLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 L + + P + G + + D R + ++ + + + Sbjct: 247 LASAKKGDVVGPIRSGVGFHILKVNDIRGANQSVSVTEVHARHILLKPSVVLTDDQARAK 306 Query: 305 VKKLRSNAI 313 ++ + Sbjct: 307 LQAVAEAIK 315 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 84/285 (29%), Gaps = 17/285 (5%) Query: 47 NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 N EV I ++ + Q + I+ LI + + + Sbjct: 143 NNEVRRRVTILPQEVDALAKQVGAQNGSDTEMNIS-HILIPLPENPSQQQVDEAEALAKK 201 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-------FML 154 + A L+ + +G K + Sbjct: 202 LMGEINGGADFGKLAISYSADSQALKGGNMGWGKLQEIPTLFAERLASAKKGDVVGPIRS 261 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 G +++ + ++++V E R +L +Q K AE + K Sbjct: 262 GVGFHILKVNDIRGANQSVSVTEVHARHILLKPSVVLTDDQA-RAKLQAVAEAIKSGNAK 320 Query: 215 DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAI 272 ++ ++ + + G + P F++ +K ++ + P + G I + Sbjct: 321 FADEAKQLSQDPGSALQGGDLGWASPDIYDPAFRDALMKLNKGEVSKPVHSSFGWHLIQL 380 Query: 273 CDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 D R + + A K K + ++++ R+ A + Sbjct: 381 LDTRQVDKTDAAQKDRAYRMLFNRKFAEEAQTWMQEQRAQAYVKI 425 >gi|293391019|ref|ZP_06635353.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951553|gb|EFE01672.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Aggregatibacter actinomycetemcomitans D7S-1] Length = 310 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 98/314 (31%), Gaps = 19/314 (6%) Query: 16 LTTYFVLIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + ++F + + ++ T+NG I + + I + Sbjct: 1 MKMNLKFVLFAAIGFFVLAAHVHAEEKVVATVNGIPILESQVQSAI------NKKTNDRQ 54 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A+ ++I + L Q +++S + ++ ++ A GL+ LD QGI + Sbjct: 55 AALNKVIDDILVDQAVKESDVKVNNAQIDQIIEGIAAQNGLTFGQLLDALDYQGISYRAY 114 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEI---------PANKQKMKNITVREYLIRTVLF 185 +Q +A Q + +V + ++ A + + Sbjct: 115 RQQIAQQVMMSEVRNHAISQSVDVSREQVEALAKKMLDEAKAKGSVAQISDTQYEVRHIL 174 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY-LLESDLH 243 + L + + + + + K++ + G Y E + Sbjct: 175 LKLNPLLNDAQAKAQLEQIRADIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPEMYVG 234 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEA 302 P Q + + P+ T+ G + + + R Q +++ Sbjct: 235 PFNQAVRTTKPGVISAPFRTEFGWHILEVTNTRQADRTEDAYRQKAYEQIVNQQLQDSAR 294 Query: 303 EYVKKLRSNAIIHY 316 ++V+ LR I Y Sbjct: 295 DWVQALRKRVDIKY 308 >gi|261400512|ref|ZP_05986637.1| SurA/PPIASE domain protein [Neisseria lactamica ATCC 23970] gi|269209772|gb|EEZ76227.1| SurA/PPIASE domain protein [Neisseria lactamica ATCC 23970] Length = 358 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 78/286 (27%), Gaps = 17/286 (5%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKIN------GELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + +L+ ++L Q ++ Sbjct: 81 SDGIAAVADNEVITRRRLAQAVADAKANLPKDVQIGDEELTGQVLMQLVNQSLIVQAGKR 140 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 + A + + K V + + Sbjct: 141 R----NIQASEAEIDAAAAQNPQLKHLSAEQRRELADSIIAEKVRQQAVMQNSRVSEAEV 196 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 E + R I + + I+ + Sbjct: 197 DRFI-----EQAQKQGITLPEGEPLRQYRAQHILIKADGENAAVGAESTIRKIYDQARNG 251 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 +++ + G + + + F+ + + P TQ G I Sbjct: 252 TDFSGLARQYSQDAGAGNGGDLGWFSDGVMVAPFEAAVHALKPGQVSAPVRTQFGWHIIK 311 Query: 272 ICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + RD E ++ + K E+ AE ++ L S A I Sbjct: 312 LNEVRDAGTPEERIRNSVRQYIFQQKAEQATAELLRDLHSGAYIDI 357 >gi|226946688|ref|YP_002801761.1| peptidyl-prolyl cis-trans isomerase SurA [Azotobacter vinelandii DJ] gi|226721615|gb|ACO80786.1| Peptidyl-prolyl cis-trans isomerase SurA [Azotobacter vinelandii DJ] Length = 432 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 100/287 (34%), Gaps = 15/287 (5%) Query: 40 SRIRTTINGEVITDGDISKRIALLKL--------QKINGELEKIAVQELIVETLKKQEIE 91 RI I+ +V+ + +R+ ++ +L ++ LI+E+++ Q Sbjct: 33 DRIVAIIDNDVVMQTQLDRRLREVEQTIAKRGAQLPPRDQLVSQVLERLILESIQLQMGS 92 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 ++GI + A+ GL+ E F + L + G+ + ++ + + I V + Sbjct: 93 RAGIRIGDEELAQAMATIAQRNGLTLEQFQAALARDGLSFDEAREQVRREMIISRVRQRV 152 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + E+ R +IP +Q + E + Sbjct: 153 VADRIQISDHEVQNFLASDLGKLQLSEEFRLANITIPLPDGAPPEQIQAAEQQVLEIYRQ 212 Query: 212 LPKDCNKLE---KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGV 267 L + + ++ + G+ + + L P F NL+ + T P T G Sbjct: 213 LSDGADFAQLAITRSAGETALEGGEIGWRRAAQLPPPFDNLVSQLPVGGVTEPVRTPGGY 272 Query: 268 EYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 I + +KR + ++ + + + + ++++ Sbjct: 273 IIIKLLEKRGGSAQIRDEVHVRHILIKPSEIRTDIDARRLIERIHER 319 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 51/138 (36%), Gaps = 3/138 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 I ++++ ++ I+ E L + F+ ++ G ++ Sbjct: 292 HVRHILIKPSEIRTDIDARRLIERIHERILNGEDFAELAKSFSEDPGSALNGGDLNWIDP 351 Query: 240 SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKI 297 + L P+F+ ++ K+ + P+ + G + + +R ++ K Sbjct: 352 NALVPEFREMMAKTPAGELSPPFKSPFGWHVLEVLGRRATDSSTQVREQQAMNVLRNRKY 411 Query: 298 EKHEAEYVKKLRSNAIIH 315 ++ +++++R A + Sbjct: 412 DEELQSWLRQIRDEAYVE 429 >gi|238028597|ref|YP_002912828.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia glumae BGR1] gi|237877791|gb|ACR30124.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia glumae BGR1] Length = 451 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 39/334 (11%), Positives = 103/334 (30%), Gaps = 28/334 (8%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVP-----IVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 F +++ + V + ++ + +N +VIT ++ +R+ Sbjct: 1 MKKTLRFAAIVSGLVAAMSLLSVTPAVAQALGSNGATLADEVVAVVNNDVITGRELDQRV 60 Query: 61 ALLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 L+ + EL + ++++E ++ Q+ ++ GI D V + A Sbjct: 61 DLIARRLRQQKAPVPPIDELRMQVLNQMVLERIQVQKAKEDGIVVDDAMVQATLQRLAAA 120 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 +S + + + L+ +G+ N F + + + + + K + E+ + + Sbjct: 121 NNMSLDQYRARLEAEGVPWNIFVSDARTELMLSRLREKEVDSKITVSDAEVASYIASQRG 180 Query: 173 ITVREYLIRTVLFSIPDNKLQNQG-----FVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + +K +++ + + Sbjct: 181 PNAGSQQDLRLEHIFVAAPQNAPETQIDAARKKAEGLLKQALAPGADFERLAKNNSEAKD 240 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKRDLGGEIALK 285 S G + L + + + NP G E + + D+R G A Sbjct: 241 AKSGGDLGFKPPGSLPADVVQAVAQLRPGQVNPALIRVPDGFEIVRLVDRRPAQGTSAAS 300 Query: 286 --------AYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ + K E + + +R+ Sbjct: 301 PKIVQTHVRHILLRVGEGKSEAQARQQLIDIRNK 334 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 19/168 (11%), Positives = 57/168 (33%), Gaps = 2/168 (1%) Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + + Q + + + + +++ ++++ D Sbjct: 277 RVPDGFEIVRLVDRRPAQGTSAASPKIVQTHVRHILLRVGEGKSEAQARQQLIDIRNKVE 336 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269 + ++ G ++ + P+F+ + +NP T+ G Sbjct: 337 AGGDFASFARTYSQDGSASQGGDLGWISPGETVPEFERAMNSLQDGQISNPVRTEYGYHL 396 Query: 270 IAICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + +RD G I + + K E+ A+++++LR ++ + Sbjct: 397 IQVLGRRDAEGSIQQQMDIARQAIGQRKAEQAYADWLRELRDSSYVQI 444 >gi|134296902|ref|YP_001120637.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia vietnamiensis G4] gi|134140059|gb|ABO55802.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia vietnamiensis G4] Length = 452 Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 99/302 (32%), Gaps = 22/302 (7%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVE 83 + ++ + +N +VIT ++ +R+ L+ + L + ++++E Sbjct: 32 GSQGAQLTDEVVAVVNNDVITGRELDQRVGLIARRLQQQNAPVPPAEQLRAQVLNQMVLE 91 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 ++ Q+ + GI D TV + A+ G++ + + + L+ QG+ + F + + Sbjct: 92 RIQVQKAKDDGIRIDDATVQSTLQRLAQANGMTLDQYRARLEAQGVPWSVFTSDARTELM 151 Query: 144 WPDVVKNDFMLKYGNLEMEIPAN----KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + K + E+ + + + + + + Q Sbjct: 152 LSKLREREVDGKITVSDAEVANYIASQRGPNASQQQDLRFQHIFIKAPTNAPQADIEAAQ 211 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 K+ + + + G + S L P K + N Sbjct: 212 KKAEALLQQATSGADFEKLARNNSEANDAKKGGDLGFKAPSTLPPDVVAAASKLRPGQVN 271 Query: 260 P--YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLR 309 P G E I + D+R G A ++ + K E + + +R Sbjct: 272 PTLIRVPDGFEIIRLVDRRQSQGASAAAPKIVQTHVRHILLRVGEGKSENQARQQLLDIR 331 Query: 310 SN 311 Sbjct: 332 KQ 333 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 31/287 (10%), Positives = 90/287 (31%), Gaps = 19/287 (6%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 ++G+ IT D ++ + Q+ ++ + +K + Sbjct: 160 VDGK-ITVSD-AEVANYIASQRGPNASQQQDL-RFQHIFIKAPTNAPQADIEAAQKKAEA 216 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN--------------D 151 +Q A + + + + + A ++ PDVV Sbjct: 217 LLQQATSGADFEKLARNNSEANDAKKGGDLGFKAPSTLPPDVVAAASKLRPGQVNPTLIR 276 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + + Q + + + +++ ++++ D + Sbjct: 277 VPDGFEIIRLVDRRQSQGASAAAPKIVQTHVRHILLRVGEGKSENQARQQLLDIRKQVEA 336 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 ++ G ++ + P+F+ + + P T+ G I Sbjct: 337 GGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQDGQISQPVRTEYGYHLI 396 Query: 271 AICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D+R+ G + + + K E+ A+++++LR ++ + Y Sbjct: 397 QVIDRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSYVQY 443 >gi|148264947|ref|YP_001231653.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter uraniireducens Rf4] gi|146398447|gb|ABQ27080.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter uraniireducens Rf4] Length = 341 Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 93/288 (32%), Gaps = 16/288 (5%) Query: 43 RTTINGEVITDGDISKRIALLKLQKIN---------GELEKIAVQELIVETLKKQEIEKS 93 +N +IT D+ + + +L Q + E+ A+ +LI L Q +K+ Sbjct: 53 VAKVNDTIITRLDLDRAVKVLVSQNRLPQPLPPESLKQAEEAALDQLISAELLYQAGQKT 112 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 I V Q+ SA++F L + + K++ + + ++ + Sbjct: 113 EIRDLEKQVEEKVSQNKAKF-PSADEFEKALKSVEMTEKDLKEFTRKDVVISNFIEKNIA 171 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES---RL 210 K E + + +E ++ +K + AE Sbjct: 172 EKTKVTEADAKKFYDDNPDKFKQEPSVKASHILCGVEASATAEEKKKAKEKAEALLKKIK 231 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269 + ++ G + + + F+ ++ TQ G Sbjct: 232 AGEDFATLAKSESTCPSSKQGGDLGFFSKGQMVAPFEKAAFALKPGEVSDVVETQFGYHI 291 Query: 270 IAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + +K++ G +K + KI+K E + +L+ A I Sbjct: 292 IKLTEKKEGGTIKFDEVKEKIENYLKNLKIQKAIGECLVELKGKAKIE 339 >gi|225874673|ref|YP_002756132.1| peptidylprolyl cis-trans isomerase SurA, putative [Acidobacterium capsulatum ATCC 51196] gi|225793602|gb|ACO33692.1| peptidylprolyl cis-trans isomerase SurA, putative [Acidobacterium capsulatum ATCC 51196] Length = 588 Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 96/296 (32%), Gaps = 14/296 (4%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL--------EKIAVQELIVETLK 86 + +I ++ +VI D + LK Q + +K ++ LI + L Sbjct: 57 PGTVVEQIVARVDDQVIDTSDYERAEQDLKQQAQQQNMSQAELDREKKDLLRNLIDQQLL 116 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 + ++ GIT + V +N S ++ QG+ FKQ + I Sbjct: 117 LAKGKQLGITGEDQLVERLDAIRKQNHLDSMTALQQAVESQGLSWQDFKQQIRNNIITQT 176 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV---LFSIPDNKLQNQGFVQKRIK 203 V++ EI + K R +R + + + +K+ Sbjct: 177 VIRQKVAPTIRISPDEIQKYYDQHKKEFDRPEEVRLSEILIPTPNPDDAAQVAEAKKKAD 236 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYV 262 E + ++ G + L P+ +N + T P Sbjct: 237 GIEAQLKAGGDFAKLAKSDSTGPTAPQGGDLGDFQKGQLAPELENATFPLKKGQFTEPIQ 296 Query: 263 TQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 T++G + + +D G ++ + K++ Y+ KLR+ + I Sbjct: 297 TKQGWIILEVTHHQDAGLAPMNQVETQIENAVGYNKMQPALRAYLTKLRNESYIDI 352 >gi|32034721|ref|ZP_00134852.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207884|ref|YP_001053109.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus pleuropneumoniae L20] gi|126096676|gb|ABN73504.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 316 Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 106/316 (33%), Gaps = 15/316 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +KL++ +L+ +S + A+ R+ ++G + + + + L + + Sbjct: 1 MKLISAKSLLVALVTAIGISQTAIAIEERVVALVDGVPVMESQVQRA---LGKKANSEAN 57 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 K A++++I + L ++ ++++G+ + + V+ A G++ LD QGI Sbjct: 58 HKAALEQIIDDLLVQKAVKEAGVKVNYSKVDQVIEDIAARNGITYGQLLDALDYQGITLE 117 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--------YLIRTVL 184 ++Q +A Q V ++ A +++ R Sbjct: 118 QYRQQIAQQMAMEQVRHISIGKSIQVDPKDVHAYAKELLEKDKANGKLKNVTGVQHRVSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK--FASKIHDVSIGKAQYLLESDL 242 I + N + ++ + K + G Y Sbjct: 178 ILIKTTPVLNDIQAKAKLAQIVADIKAGKTTFEEAAKANSVDYLSAADGGDLGYNFLDIY 237 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKH 300 P F + Q T P+ +Q G + + + Q + ++ Sbjct: 238 DPAFAKAASTAKQEQITAPFKSQFGWHILKVTGTQQGDRTEDAYNQRAYEQLVDKQAQEA 297 Query: 301 EAEYVKKLRSNAIIHY 316 ++VK LR A + Y Sbjct: 298 AKDWVKALRKTADVQY 313 >gi|302039584|ref|YP_003799906.1| putative peptidylprolyl isomerase [Candidatus Nitrospira defluvii] gi|300607648|emb|CBK43981.1| putative Peptidylprolyl isomerase [Candidatus Nitrospira defluvii] Length = 344 Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 86/302 (28%), Gaps = 3/302 (0%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAV 77 + V I + ++ + RI +N ++I ++ + + + + + Sbjct: 41 ALIFCLCLLFVLISNAEAAKLEDRIVAVVNSDLIMLSELKRDLLPEQDRLRKLYKGEDLE 100 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 + L N + + E+ + D + + Sbjct: 101 RRLKTAEAMGVTKMIERKLQLQAAKNKGVDVSDQEVVQAVEEMKKQGEAIDSADPNTARS 160 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 + Q VV + + E+ Q+ ++ + I Sbjct: 161 IREQLTLMRVVDREVRGLIMVADSEMKRYYQEHQDRFAYPEEYQLSQILIKPRTPDGLSA 220 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNN 256 R + + + + +F+ G+ + + +L P + Sbjct: 221 AHGRAEALLATLKQGEPFEDLALRFSDGADASRGGRLGLVRQGELIPALEQALTSVDVGK 280 Query: 257 TTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T T +G+ + + DK+ +KA + + K E ++ L++ A I Sbjct: 281 ITGIVETAEGLHIVRVDDKKPRQFRPFEQVKAEIQSLVFQQKTEDQYQIWMADLKNKAYI 340 Query: 315 HY 316 Sbjct: 341 EI 342 >gi|227821473|ref|YP_002825443.1| putative survival protein SurA, probable peptidyl-prolyl cis-trans isomerase protein [Sinorhizobium fredii NGR234] gi|227340472|gb|ACP24690.1| putative survival protein SurA, probable peptidyl-prolyl cis-trans isomerase protein [Sinorhizobium fredii NGR234] Length = 312 Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 85/311 (27%), Positives = 144/311 (46%), Gaps = 7/311 (2%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + I ++ L + ++ I S + +S ++ +N VIT GDI+KR+A L+LQ+ Sbjct: 1 MGGKISIVRALSALAVAGVLSIASGAAVQAASGVKVIVNSTVITSGDIAKRVAFLRLQRQ 60 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 G + A ++L+ E LK+ EI + + + V+ + + A LS E LD+ G Sbjct: 61 GGGAAE-AEKQLVDEVLKRAEIARVQQSVSTQEVDAAYARFAAGNKLSTEQLGKILDQSG 119 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +G HFKQY+A+Q WP VV + ++ + Sbjct: 120 VGIEHFKQYIAVQMSWPRVVNFRYGSASRLSGGDLVKRMMEGGGNKPVTTEYFLQQVIFV 179 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 + + KR +A SR + P + FA+ DVSI +L L ++ Sbjct: 180 IPESKRGAITAKRQAEANASRSQFPGCETS-KAFAANYRDVSIRSLGRVLAQQLPEDWKP 238 Query: 249 LLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI----EKHEAE 303 L++K+ TT VT+KGVEY+AIC KR + + A + A++ K + + + Sbjct: 239 LVEKAGDGTTTGTRVTEKGVEYLAICKKRQVNDDAAAEVVFRAEDIGKKKAGGEDPNSEK 298 Query: 304 YVKKLRSNAII 314 Y+++LRS A I Sbjct: 299 YLEELRSKAQI 309 >gi|330830997|ref|YP_004393949.1| peptidylprolyl cis-trans isomerase SurA [Aeromonas veronii B565] gi|328806133|gb|AEB51332.1| Peptidylprolyl cis-trans isomerase SurA [Aeromonas veronii B565] Length = 434 Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 32/310 (10%), Positives = 99/310 (31%), Gaps = 15/310 (4%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--- 70 K L +F + + + + ++ +N +V+ + +KL Sbjct: 5 KTLIALLTAGMFGAMSQAALAAPELMDKVLAVVNKDVVLSSQQDALVNKVKLSAQESGQS 64 Query: 71 -----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 L K A+ LI E+L+ Q E+ G+ + A + ++ + + L Sbjct: 65 LPDDATLRKQALDRLIQESLQLQLAERQGLKISDTQLEQAIQGIAADNKMTLDQLRAQLA 124 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 ++G+ +++ + + + +V +N + E E+ + +K ++ Sbjct: 125 REGMTYAQYREEVRREILMNEVRRNQVRRRINISEQEVKQVVEILKKQGQQQNEYHVGHI 184 Query: 186 SIPDNKLQNQGFVQKRIKDAE---ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 I + E + + ++ + G ++ ++ Sbjct: 185 QIALPDNPTAAQLDAAKSKIERILAALKQGADFRKLAIAESNGPKALEGGDWGWMSPQEM 244 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIE 298 + + + + P + G+ + + D + + ++ + + E Sbjct: 245 PTLMAEAVQGAKKGDIVGPLRSGAGLHIVKVFDTKGQQQVMQTEVKARHILIKPSIILSE 304 Query: 299 KHEAEYVKKL 308 + + + Sbjct: 305 EKAKGMLDGI 314 Score = 88.2 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 31/274 (11%), Positives = 84/274 (30%), Gaps = 9/274 (3%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I++ ++ + + +LK Q E I + + Q A Sbjct: 157 ISEQEVKQVVEILKKQGQQQN-EYHVGHIQIALPDNPTAAQLDAAKSKIERILAALKQGA 215 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 L+ + + +G + V G L + K+ Sbjct: 216 DFRKLAIAESNGPKALEGGDWGWMSPQEMPTLMAEAVQGAKKGDIVGPLRSGAGLHIVKV 275 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE-----SRLRLPKDCNKLEKFASK 225 + ++ +++T + + + +++ K + + + EK++ Sbjct: 276 FDTKGQQQVMQTEVKARHILIKPSIILSEEKAKGMLDGILHDIKSGKASFASMAEKYSED 335 Query: 226 I-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 V G+ + + P+F++++ + + P+ T G + + D+R Sbjct: 336 PGSAVQGGELGWSDPNVYVPEFRDMVNRLQPGQISAPFRTSHGWHIVQVEDRRSQDATDK 395 Query: 284 LKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + ++ +LR A I Sbjct: 396 AQEQRAYQLIYNRRFVEESQAWLDELRDEAYIQI 429 >gi|167854677|ref|ZP_02477457.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase [Haemophilus parasuis 29755] gi|167854214|gb|EDS25448.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase [Haemophilus parasuis 29755] Length = 312 Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 54/315 (17%), Positives = 111/315 (35%), Gaps = 15/315 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + T + + ++ S R+ T++G I + + L + K Sbjct: 1 MKFTQVKSLFIAGFALFAFSSANAEERVVATVDGYPIMQSQVKQA---LGKKANTEANRK 57 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A++ +I + + ++ I++SGI D V+ A G++ LD QGI + + Sbjct: 58 AALETIIDDFVVQRAIKESGIKVDYAYVDQMMEDVAAQNGITYGQLLDALDYQGISLSQY 117 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV----------REYLIRTVL 184 +Q LA Q + V + ++ + + M + EY I +L Sbjct: 118 RQQLAHQLLMEQVRQQSIGNSIQVDPKDVQSLAKDMLDKAKINGTLETVSATEYRISHIL 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 Q + A+ ++ + I + G + Sbjct: 178 IKTTPILNDMQAKAKLLSITADIKSGKITFEEAAKINSVDYISGIDGGDLGFNFLDAYDS 237 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICD-KRDLGGEIALKAYLSAQNTPTKIEKHEA 302 F N+ K + ++P+ +Q G + + D +R E A Q +++ Sbjct: 238 TFANIASKSKIDVISSPFKSQFGWHILKVTDTRRGDRTEDAYLQRAYEQLIDKQVQVASK 297 Query: 303 EYVKKLRSNAIIHYY 317 +++K LRS I Y+ Sbjct: 298 DWIKVLRSKLDIKYF 312 >gi|238786686|ref|ZP_04630487.1| Chaperone surA [Yersinia frederiksenii ATCC 33641] gi|238725054|gb|EEQ16693.1| Chaperone surA [Yersinia frederiksenii ATCC 33641] Length = 434 Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 107/296 (36%), Gaps = 16/296 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ + ++ + ++ ++ V+ D+ + +KL G L Sbjct: 7 LILGLVVCANTAFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQAGQQVPDDGTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K GIT ++ A ++ + S L G+ N Sbjct: 67 RHQVLERLIMDNILLQMAKKMGITVSDEALDKAIADIAAQNRMTPDQMRSRLAADGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +++ + + + +V N+ + L E+ + +++ N T + + IP + Sbjct: 127 TYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQIGNQTSGDAELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 +Q V + A + + + ++ + G+ + +L F + Sbjct: 187 PSQQQVDQAEDLANKLVSDIKGGADFGKLAIANSADSQALKGGQMGWGKLQELPSLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKH 300 L ++ + P + G + + D R + ++ + +P ++ Sbjct: 247 LQSANKGDVVGPIRSGVGFHILKVNDIRGADKTVSVTEIHARHILLKPSPVMTDEQ 302 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 17/142 (11%), Positives = 45/142 (31%), Gaps = 3/142 (2%) Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY 236 + + P + ++ K A + + ++ + + G + Sbjct: 284 EIHARHILLKPSPVMTDEQARAKLSAAAADIKSGKSSFATIAKEISQDPGSAMQGGDLGW 343 Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTP 294 P F++ + K + + P + G I + D R + + A K Sbjct: 344 ASPDIYDPAFRDAVMKLQKGEISAPVHSSFGWHLIQVIDNRQVDKTDAAQKDRAYRMLFS 403 Query: 295 TKIEKHEAEYVKKLRSNAIIHY 316 K + ++++ R+ A + Sbjct: 404 RKFAEEAQTWMQEQRAAAYVKI 425 >gi|241203946|ref|YP_002975042.1| peptidyl-prolyl cis-trans isomerase protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857836|gb|ACS55503.1| putative peptidyl-prolyl cis-trans isomerase protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 314 Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 10/290 (3%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94 S +S ++ +NG IT GD++KR A L+LQ + K A ++LI E LK+QE+ + Sbjct: 26 SALAASEVKAVVNGTAITSGDVAKRQAFLRLQHTKADA-KAAEEQLIDEALKRQEVTRVH 84 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 ++ V+ F + + LS E S LD+ G+G +HFK ++A+Q WP VV + Sbjct: 85 MSVSQQDVDASFARFSSGNKLSPEQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARYGS 144 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 ++ + + + + KR +AE SR + P Sbjct: 145 TSRLSNYDLVSRMMQNNKQKPVTTEYMLQQVIFVIPQAKRGAITGKRKGEAEASRSKFPG 204 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274 ++ + FA+ + DVS+ +L ++ P ++ L+++++ NTT VT KGVEY+AIC Sbjct: 205 C-DQAKVFAATMRDVSVRDLGRMLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAICS 263 Query: 275 KRDLGGEIALKAYLSAQNTPTKI--------EKHEAEYVKKLRSNAIIHY 316 +R + + A + ++ ++ +Y+ +LR A I Y Sbjct: 264 QRQVSDDQAAEMVFRQEDLDKSKGGKDASPENENSKKYLDELRKKAQIAY 313 >gi|190149693|ref|YP_001968218.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252643|ref|ZP_07338806.1| survival SurA-like protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247402|ref|ZP_07529449.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307256445|ref|ZP_07538227.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307263001|ref|ZP_07544623.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914824|gb|ACE61076.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648611|gb|EFL78804.1| survival SurA-like protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856099|gb|EFM88255.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306865075|gb|EFM96976.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306871627|gb|EFN03349.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 316 Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 105/316 (33%), Gaps = 15/316 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +KL++ +L+ +S + A+ R+ ++G + + + + L + + Sbjct: 1 MKLISAKSLLVALVTAIGISQTAIAIEERVVALVDGVPVMESQVQRA---LGKKANSEAN 57 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 K A++++I + L ++ ++++G+ + V+ A G++ LD QGI Sbjct: 58 HKAALEQIIDDLLVQKAVKEAGVKVNYAKVDQVIEDIAARNGITYGQLLDALDYQGITLE 117 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--------YLIRTVL 184 ++Q +A Q V ++ A +++ R Sbjct: 118 QYRQQIAQQMAMEQVRHISIGKSIQVDPKDVHAYAKELLEKDKANGKLKNVTGVQHRVSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK--FASKIHDVSIGKAQYLLESDL 242 I + N + ++ + K + G Y Sbjct: 178 ILIKTTPVLNDIQAKAKLAQIVADIKAGKTTFEEAAKANSVDYLSAADGGDLGYNFLDIY 237 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKH 300 P F + Q T P+ +Q G + + + Q + ++ Sbjct: 238 DPAFAKAASTAKQEQITAPFKSQFGWHILKVTGTQQGDRTEDAYNQRAYEQLVDKQAQEA 297 Query: 301 EAEYVKKLRSNAIIHY 316 ++VK LR A + Y Sbjct: 298 AKDWVKALRKTADVQY 313 >gi|170691413|ref|ZP_02882578.1| SurA domain [Burkholderia graminis C4D1M] gi|170143618|gb|EDT11781.1| SurA domain [Burkholderia graminis C4D1M] Length = 453 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 100/304 (32%), Gaps = 22/304 (7%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELI 81 ++ I +N VIT ++ +R++L+ + L + + +++ Sbjct: 32 ALAGNRGQTVDTIAAVVNNGVITRRELEERVSLITRRLNQQNAPIPPADQLRQQVLNQMV 91 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 +E ++ Q+ ++ GI D V + A+ LS + + + ++ QG+ F + Sbjct: 92 LERIQLQKAKEDGINIDDAAVQKTLERLAQANNLSLDVYRARIEAQGVPWTTFTSDARTE 151 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPAN----KQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 + + + K + E+ + T +L +L + + + Sbjct: 152 LTLSRLREKEVDSKVTVSDAEVANYIASQRGPNAGATSDLHLEHILLKAPLNAPQPDIEA 211 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257 QK+ + + + G Y S L P+F + Sbjct: 212 AQKKAEALLAEAKGGANFEKLAKSNSQAPDASKGGDMGYAAPSKLPPEFVKAASALRPGQ 271 Query: 258 TNP--YVTQKGVEYIAICDKRDLGGE--------IALKAYLSAQNTPTKIEKHEAEYVKK 307 NP T G E + + D+R G ++ + E + + + Sbjct: 272 VNPEVIRTSDGFEVVRLVDRRAGQGTSSDAPKLVQTHVRHILLRVGDGMSEPQARQKLLE 331 Query: 308 LRSN 311 +R Sbjct: 332 IRKE 335 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 16/145 (11%), Positives = 50/145 (34%), Gaps = 2/145 (1%) Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + + ++ ++++ + + ++ G Sbjct: 300 DAPKLVQTHVRHILLRVGDGMSEPQARQKLLEIRKEIAAGGDFSKFASTYSQDGSSSQGG 359 Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSA 290 ++ + P+F+ + ++P ++ G I + ++R+ G IA + Sbjct: 360 DLGWISPGETVPEFERAMNSLQDGQISDPVRSEYGYHLIQVLERREAQGSIAQQMDLARQ 419 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIH 315 K E+ A+++++LR A + Sbjct: 420 AIGQRKAEQAYADWLRELRDTAYVE 444 >gi|258405810|ref|YP_003198552.1| SurA domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257798037|gb|ACV68974.1| SurA domain protein [Desulfohalobium retbaense DSM 5692] Length = 311 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 111/304 (36%), Gaps = 22/304 (7%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKR----IALLKLQKIN-------GELEKI 75 V + RI +NGE+IT +++++ + + Q+ E++K Sbjct: 14 FCSAVPATGEQVVDRIVAVVNGEIITLFELNQKADPVVERFRSQQPGSLTEDRIEEIKKR 73 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 +Q ++ L +QE E+ + + V + G E L +G+ + F+ Sbjct: 74 VLQTMVDNMLLRQEAERLEMEIEDAEVQDRIEEMKTQRGWDDERLDQMLANEGLDRSSFE 133 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + +V K EI + + +E + L ++P Sbjct: 134 KNIREDLMRRRLVGAMVRRKVVVTNEEIQTFYKDNQEQFAQEKKVDLRLLAVPS------ 187 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQ 254 V K + + ++F+ G ++ +DL PQ++ + S Sbjct: 188 --VDKAKQLRQRITDGDLDFAQAAKQFSQGPAAGQGGDLGWVKWADLAPQWKEVLRSTSP 245 Query: 255 NNTTNPYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + T P+ Q + + D K + A++ ++ K EK Y+++LR A Sbjct: 246 GSMTEPFSLQGQTAILYLEDMQKGQVQPLSAVRDRIADTLRGPKFEKQLETYLQRLRDKA 305 Query: 313 IIHY 316 ++ Sbjct: 306 VVDI 309 >gi|254283287|ref|ZP_04958255.1| chaperone SurA [gamma proteobacterium NOR51-B] gi|219679490|gb|EED35839.1| chaperone SurA [gamma proteobacterium NOR51-B] Length = 435 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 108/323 (33%), Gaps = 12/323 (3%) Query: 1 MTSKVFTSLSD-FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR 59 MT+ T LS I + T + + + + +I ++ ++I ++ +R Sbjct: 1 MTATNITFLSRALITTVLTSGMFLNAITAHAQAGDQVQILEQIVAIVDDDIILASELRER 60 Query: 60 IALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 + LK+ L + + LI+E+++ Q E+ GI ++ + A Sbjct: 61 LDTLKVNIERQGAEMPAEDILVRETLDRLILESIQLQMGERYGIRIPDTQLDEALRRVAS 120 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 N GL+ F L+ +G ++ + + V + + + EI + Sbjct: 121 NNGLTLAQFRGALEAEGRSYAEMRESVRKEMTIQRVQQGNVSRNINISDAEIDNYLETEA 180 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVS 230 + E R IP N ++ + + + + + ++ + Sbjct: 181 GQELTEPQYRVFQALIPVNSTDSEAERASKEAFVDSALSAILDGQAFESAVSVTQPYAFQ 240 Query: 231 IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYL 288 G + SD+ F ++ T + G + + D R+ ++ Sbjct: 241 GGDLGWRKLSDIPSMFTAIVPTLDRGETGKVESGSGFHLVHVADVRGRERVIAQTKVRHI 300 Query: 289 SAQNTPTKIEKHEAEYVKKLRSN 311 + + + E + LR Sbjct: 301 LVKPSEVRTEAETEQLAADLRQR 323 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 26/269 (9%), Positives = 85/269 (31%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I+D +I + Q++ + Q LI E E++ ++ + Sbjct: 167 ISDAEIDNYLETEAGQELTEPQYR-VFQALIPVNSTDSEAERASKEAFVDSALSAILDGQ 225 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + +G ++ + + K + + + Sbjct: 226 AFESAVSVTQPYAFQGGDLGWRKLSDIPSMFTAIVPTLDRGETGKVESGSGFHLVHVADV 285 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + + ++++ + ++ D + L ++++ I Sbjct: 286 RGRERVIAQTKVRHILVKPSEVRTEAETEQLAADLRQRLLDGADFAELAKEYSEDIGSAQ 345 Query: 230 SIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAY 287 G + + P+F+ + + ++ P +Q G + + +RD + + Sbjct: 346 EGGDLGWTSAGQMVPEFEQAMAETEVDDIAPPVRSQFGWHVLEVTGRRDKDVSDEMRRNQ 405 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ K ++ +++K+R+ A + Sbjct: 406 VANYLHDAKYQEELDAWLRKIRTEAFVDI 434 >gi|149377958|ref|ZP_01895684.1| Parvulin-like peptidyl-prolyl isomerase [Marinobacter algicola DG893] gi|149357732|gb|EDM46228.1| Parvulin-like peptidyl-prolyl isomerase [Marinobacter algicola DG893] Length = 429 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 102/309 (33%), Gaps = 16/309 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGEL 72 + ++ +V + ++ +N +VI ++ RI + + L Sbjct: 2 LALMVVMVSATVQADRKLLDQVVAVVNDDVILQSELEARINTITGRLRAQGTGLPPRDIL 61 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 E+ +++LI E+++ Q +++G+ N +N A+ ++ F L ++G+ Sbjct: 62 EERVLEQLISESIQLQMADRAGMRISDNELNETLASIAQRNNMTLAQFEQQLVQEGVTYR 121 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN---KQKMKNITVREYLIRTVLFSIPD 189 ++ + + I V + + + E+ L ++ Sbjct: 122 EAREQIRNEMITSRVQQRQVGNRVRVTDREVENYLAAMAGQGRSNAEYELAHILIEVNDF 181 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 N + +++++ E + + + + G + E+ L ++ Sbjct: 182 NDEEEVSAAREKVEQLREEIAEGRDFRSVAVAESDASNALDGGNMGWRAENQLPSLVADV 241 Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKRDLG----GEIALKAYLSAQNTPTKIEKHEAEY 304 + + G + + D+R E + ++ + + T E Sbjct: 242 VPDLETGTVSPVLRNSSGFHLVMVMDRRGGDKAQFIEQSKVRHILVRTSETVSEAQAEAT 301 Query: 305 VKKLRSNAI 313 ++ L Sbjct: 302 IRDLYQQID 310 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 27/280 (9%), Positives = 84/280 (30%), Gaps = 10/280 (3%) Query: 46 INGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + V +TD ++ +A + Q + ++A LI E E S + Sbjct: 141 VGNRVRVTDREVENYLAAMAGQGRSNAEYELA-HILIEVNDFNDEEEVSAAREKVEQLRE 199 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML-----KYGNL 159 + ++ + + G + + V + + + Sbjct: 200 EIAEGRDFRSVAVAESDASNALDGGNMGWRAENQLPSLVADVVPDLETGTVSPVLRNSSG 259 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + ++ + + + ++ ++ + I+D + Sbjct: 260 FHLVMVMDRRGGDKAQFIEQSKVRHILVRTSETVSEAQAEATIRDLYQQIDNGADFAVIA 319 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277 + + G ++ + P+F+ + ++ P+ +Q G + + D+R Sbjct: 320 REHSDDPVSGSDGGNLGWVSPGQMVPEFEQAMMEADVGELKGPFRSQFGWHILQVQDRRQ 379 Query: 278 LGGEIALKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ K + +++++R A I + Sbjct: 380 QDISGDVRESEARQAIYRRKFDTELQNWLREIRDEAFIEF 419 >gi|322514871|ref|ZP_08067889.1| peptidyl-prolyl cis-trans isomerase [Actinobacillus ureae ATCC 25976] gi|322119175|gb|EFX91320.1| peptidyl-prolyl cis-trans isomerase [Actinobacillus ureae ATCC 25976] Length = 314 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 107/316 (33%), Gaps = 16/316 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +KL++ +L+ +S + A R+ T++G + + D+ + L + Sbjct: 1 MKLISAKSLLLTLVAAVGISQSAMAWEERVVATVDGVPVMESDVQR----LLGKNATAAQ 56 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 K AV++ I + L ++ ++++G+ + V+ Q A G++ LD QGI N Sbjct: 57 HKSAVEQAIDDVLIQKAVKEAGVKVNYAHVDQAIEQIAARNGITYGQLLDALDYQGITLN 116 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV--------REYLIRTVL 184 ++Q +A Q V ++ A Q++ R Sbjct: 117 QYRQQIAQQMAMEQVRNISIGKSIQVQPQDVQARAQELLAQDKAIGKLKTVTGNQYRISH 176 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF--ASKIHDVSIGKAQYLLESDL 242 + + N + ++ + K + G Y Sbjct: 177 ILLKTTPVLNDVQAKAKLTQITADINAGKTTFEQAAKLNSVDYVSAADGGDLGYNFLDIY 236 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKH 300 P F + Q+ T P+ +Q G + + + Q + ++ Sbjct: 237 DPAFAKAASMAKQDQITAPFKSQFGWHILKVTGSQQGDRTEDAYHQRAYEQLVDKQAQEA 296 Query: 301 EAEYVKKLRSNAIIHY 316 ++VK LR A + Y Sbjct: 297 SRDWVKALRKTANVQY 312 >gi|303249762|ref|ZP_07335966.1| survival SurA-like protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307245230|ref|ZP_07527321.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307251950|ref|ZP_07533851.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307254177|ref|ZP_07536022.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258641|ref|ZP_07540376.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260875|ref|ZP_07542561.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|302651329|gb|EFL81481.1| survival SurA-like protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306853874|gb|EFM86088.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306860642|gb|EFM92654.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306862877|gb|EFM94826.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867298|gb|EFM99151.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869442|gb|EFN01233.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 316 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 105/316 (33%), Gaps = 15/316 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +KL++ +L+ +S + A+ R+ ++G + + + + L + + Sbjct: 1 MKLISAKSLLVALVTAIGISQTAIAIEERVVALVDGVPVMESQVQRA---LGKKANSEAN 57 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 K A++++I + L ++ ++++G+ + V+ A G++ LD QGI Sbjct: 58 HKAALEQIIDDLLVQKAVKEAGVKVNYAKVDQVIEDIAARNGITYGQLLDALDYQGITLE 117 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--------YLIRTVL 184 ++Q +A Q V ++ A +++ R Sbjct: 118 QYRQQIAQQMAMEQVRHISIGKSIQVDPKDVHAYAKELLEKDKANGKLKNVTGVQHRVSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK--FASKIHDVSIGKAQYLLESDL 242 I + N + ++ + K + G Y Sbjct: 178 ILIKTTPVLNDIQAKAKLAQIVADIKAGKTTFEEAAKANSVDYLSAADGGDLGYNFLDIY 237 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKH 300 P F + Q T P+ +Q G + + + Q + ++ Sbjct: 238 DPAFAKAASTAKQEQITAPFKSQFGWHILKVTGTQQGDRTEDAYNQRAYEQLVDKQAQEA 297 Query: 301 EAEYVKKLRSNAIIHY 316 ++VK LR A + Y Sbjct: 298 AKDWVKALRKTANVQY 313 >gi|322421262|ref|YP_004200485.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18] gi|320127649|gb|ADW15209.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18] Length = 342 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 100/286 (34%), Gaps = 16/286 (5%) Query: 45 TINGEVITDGDISKRIALLKLQKINGE---------LEKIAVQELIVETLKKQEIEKSGI 95 +NG+VIT ++ + + L QK + ++K A+++L+ L Q +K+ I Sbjct: 50 KVNGKVITRAEVDRAVKALLDQKQLRQPVALEELRAVKKEAMEQLVSSELLYQAAQKTDI 109 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 V + S E F+ + + G+ +Q + + D ++ F + Sbjct: 110 GDVEQKVAQVIARDRARY-PSDEAFARSVKEAGLTLPMLQQLIRKEMAVSDFIETMFGAR 168 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 E E + + ++ +R + ++ + AE R+ + Sbjct: 169 INVGEDEARSFYEANRDRFKTGSSVRASQILVMVPGPSQDRDRERARERAEILLHRVKEG 228 Query: 216 CNK---LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 N + + G + + L P + + ++ T G + Sbjct: 229 ENFGILAQSHSDCPSKARGGDLGFFNKGKLDPGLEQAVFALKPGEISDIVQTSFGFHILK 288 Query: 272 ICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +KR + + + K+ + AEYV KLR A + Sbjct: 289 LTEKRGPRLETYEEARPEIYSYLKREKMLRLVAEYVAKLRGKAKVE 334 >gi|172061669|ref|YP_001809321.1| SurA domain-containing protein [Burkholderia ambifaria MC40-6] gi|171994186|gb|ACB65105.1| SurA domain protein [Burkholderia ambifaria MC40-6] Length = 452 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 99/299 (33%), Gaps = 22/299 (7%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVETLK 86 ++ + +N +VIT ++ +R+ L+ + L + ++++E ++ Sbjct: 35 GAQLADEVVAVVNNDVITGRELDQRVGLIARRLQQQNAPVPPADQLRAQVLNQMVLERIQ 94 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 Q+ + GI D TV + A+ G++ E + + L+ QG+ + F + + Sbjct: 95 VQKAKDDGIRIDDATVQSTLQRLAQANGMTLEQYRARLEAQGVPWSVFTSDARTELMLSK 154 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMK----NITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + K + E+ + + + + + QK+ Sbjct: 155 LREREVDGKITVSDAEVVNYIASQRGPSASQQQDLRFQHIFIKAPTNAPQAEIEVAQKKA 214 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP-- 260 + + + + G + L + + K + NP Sbjct: 215 EALLQQATSGADFEKLAKNNSEANDAKKGGDLGFKAPGALPAEVVDAASKLRPGQVNPTL 274 Query: 261 YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLRSN 311 G E + + D+R G A ++ + K E + ++ +R Sbjct: 275 IRVPDGFEIVRLVDRRQSQGTSAAAPKIVQTHVRHILLRVGEGKSEGQARQQLQDIRRQ 333 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 30/287 (10%), Positives = 91/287 (31%), Gaps = 19/287 (6%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 ++G+ IT D ++ + + Q+ ++ + +K + Sbjct: 160 VDGK-ITVSD-AEVVNYIASQRGPSASQQQDL-RFQHIFIKAPTNAPQAEIEVAQKKAEA 216 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN--------------D 151 +Q A + + + + + A ++ +VV Sbjct: 217 LLQQATSGADFEKLAKNNSEANDAKKGGDLGFKAPGALPAEVVDAASKLRPGQVNPTLIR 276 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + + Q + + + +++G +++++D Sbjct: 277 VPDGFEIVRLVDRRQSQGTSAAAPKIVQTHVRHILLRVGEGKSEGQARQQLQDIRRQVEA 336 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 ++ G ++ + P+F+ + + P T+ G I Sbjct: 337 GGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQDGQISQPVRTEYGYHLI 396 Query: 271 AICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D+R+ G + + + K E+ A+++++LR ++ + Y Sbjct: 397 QVIDRRESEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSYVQY 443 >gi|165975861|ref|YP_001651454.1| survival SurA-like protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165875962|gb|ABY69010.1| survival SurA-like protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 316 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 105/316 (33%), Gaps = 15/316 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +KL++ +L+ +S + A+ R+ ++G + + + + L + + Sbjct: 1 MKLISAKSLLVALVTAIGISQTAIAIEERVVALVDGVPVMESQVQRA---LGKKANSEAN 57 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 K A++++I + L ++ ++++GI + V+ A G++ LD QGI Sbjct: 58 HKAALEQIIDDLLVQKAVKEAGIKVNYAKVDQVIEDIAARNGITYGQLLDALDYQGITLE 117 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--------YLIRTVL 184 ++Q +A Q V ++ A +++ R Sbjct: 118 QYRQQIAQQMAMEQVRHISIGKSIQVDPKDVHAYAKELLEKDKANGKLKNVTGVQHRVSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK--FASKIHDVSIGKAQYLLESDL 242 I + N + ++ + K + G Y Sbjct: 178 ILIKTTPVLNDIQAKAKLAQIVADIKAGKTTFEEAAKANSVDYLSAADGGDLGYNFLDIY 237 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKH 300 P F + Q T P+ +Q G + + + Q + ++ Sbjct: 238 DPAFAKAASTAKQEQITAPFKSQFGWHILKVTGTQQGDRTEDAYNQRAYEQLVDKQAQEA 297 Query: 301 EAEYVKKLRSNAIIHY 316 ++VK LR A + Y Sbjct: 298 AKDWVKALRKTADVQY 313 >gi|222056577|ref|YP_002538939.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. FRC-32] gi|221565866|gb|ACM21838.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. FRC-32] Length = 340 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 96/288 (33%), Gaps = 16/288 (5%) Query: 43 RTTINGEVITDGDISKRIALLKLQK---------INGELEKIAVQELIVETLKKQEIEKS 93 ING +IT ++ + + +L Q + E+ A+ +LI L Q +K+ Sbjct: 52 VAKINGTIITRKELDRAVKVLVAQNRLPQALPPEQQKQAEEAALDQLISAELMYQAGQKT 111 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 I + + + E+F L + + K++ + ++ + + Sbjct: 112 EIKDIDKQIEEKIALNRAKF-PNPEEFDKALKSVEMSEKDLKEFTRKDIVITAFIEKNII 170 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR-- 211 E + ++ IR I + + +K + AE + Sbjct: 171 SNINVAEADAKKFYDDNTEKFKQDESIRASHILIGVDAKAGEEDKKKAREKAEGILKKIK 230 Query: 212 -LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269 + ++ G + + F+N ++ TQ G Sbjct: 231 AGEDFATLAKAESTCPSSKQGGDLGTFPKGQMVAPFENAAFALKPGEVSDVVETQFGYHI 290 Query: 270 IAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + +K++ G +K + KI+K +Y+++L+S A Sbjct: 291 IKLAEKKEAGMVKFDEVKTKIVDYLKSQKIQKGVGDYLEELKSKAKTE 338 >gi|134093645|ref|YP_001098720.1| periplasmic peptidyl-prolyl cis-trans isomerase (PPIase), involved in maturation of outer membrane proteins [Herminiimonas arsenicoxydans] gi|133737548|emb|CAL60591.1| Chaperone SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (PPIase SurA) (Rotamase SurA) [Herminiimonas arsenicoxydans] Length = 469 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 101/311 (32%), Gaps = 28/311 (9%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQEL 80 S ++ I +N EVIT + +R+ +++ + +L++ ++ + Sbjct: 43 ASTSRLQPRLADAILVVVNNEVITRYEFIERLKVIENRLKGQGGQMPPMEQLQRQLLERM 102 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 IVE + Q+ ++SGI D ++ + A L+ +F L++ G+ F++ + Sbjct: 103 IVERAQLQQAKESGIKVDDAMLDRAVARIADQNQLTMPEFRKRLEQDGMVYFQFREEIRS 162 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI----RTVLFSIPDNKLQNQG 196 + I + + + K + E+ A + + ++ + Q Sbjct: 163 EMILQRLREREVDNKIQVSDAEVDAYMAEHSGTNANAPQELNLGQILIRVPENATPQQLA 222 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +KR ++ ++ ++ G+ + + L F Q Sbjct: 223 DSRKRAEEVLAQLNAGGDFAKLAAAYSDGTDGLTGGELGWRTQDRLPQLFVDATASLQQG 282 Query: 256 NTTNPYVTQKGVEYIAICDKRDL---------------GGEIALKAYLSAQNTPTKIEKH 300 + G + + KR + +++ + Sbjct: 283 QIAPLVKSGNGFHILKVLGKRTQSVLRAAPGANPAAANTVKQTHASHILIKVNQVVSAAD 342 Query: 301 EAEYVKKLRSN 311 + +L+ Sbjct: 343 ARRKLTELKQR 353 Score = 95.9 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 13/139 (9%), Positives = 45/139 (32%), Gaps = 2/139 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + + + + +K + + + ++ G ++ Sbjct: 326 HASHILIKVNQVVSAADARRKLTELKQRLDNKAATFEELARLHSNDFSASKGGDLGWIYP 385 Query: 240 SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKI 297 D P+F+ + + P + G I + +++ + + K+ Sbjct: 386 GDTVPEFERAMDALPVGEVSEPIESPFGYHLILVKERKSDDVSQERQRLVVRQALRAQKV 445 Query: 298 EKHEAEYVKKLRSNAIIHY 316 E+ ++++++R A + Y Sbjct: 446 EEATQDWLRQVRDRAYVEY 464 >gi|171317315|ref|ZP_02906511.1| SurA domain [Burkholderia ambifaria MEX-5] gi|171097514|gb|EDT42352.1| SurA domain [Burkholderia ambifaria MEX-5] Length = 452 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 99/299 (33%), Gaps = 22/299 (7%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVETLK 86 ++ + +N +VIT ++ +R+ L+ + L + ++++E ++ Sbjct: 35 GAQLADEVVAVVNNDVITGRELDQRVGLIARRLQQQNAPVPPADQLRAQVLNQMVLERIQ 94 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 Q+ + GI D TV + A+ G++ E + + L+ QG+ + F + + Sbjct: 95 VQKAKDDGIRIDDATVQSTLQRLAQANGMTLEQYRARLEAQGVPWSVFTSDARTELMLSK 154 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMK----NITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + K + E+ + + + + + QK+ Sbjct: 155 LREREVDGKITVSDAEVVNYIASQRGPSASQQQDLRFQHIFIKAPTNAPQAEIEVAQKKA 214 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP-- 260 + + + + G + L + + K + NP Sbjct: 215 EALLQQATSGADFEKLAKNNSEANDAKKGGDLGFKAPGALPAEVVDAASKLRPGQVNPTL 274 Query: 261 YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLRSN 311 G E + + D+R G A ++ + K E + ++ +R Sbjct: 275 IRVPDGFEIVRLVDRRQSQGTSAAAPKIVQTHVRHILLRVGEGKSEGQARQQLQDIRRQ 333 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 30/287 (10%), Positives = 91/287 (31%), Gaps = 19/287 (6%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 ++G+ IT D ++ + + Q+ ++ + +K + Sbjct: 160 VDGK-ITVSD-AEVVNYIASQRGPSASQQQDL-RFQHIFIKAPTNAPQAEIEVAQKKAEA 216 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN--------------D 151 +Q A + + + + + A ++ +VV Sbjct: 217 LLQQATSGADFEKLAKNNSEANDAKKGGDLGFKAPGALPAEVVDAASKLRPGQVNPTLIR 276 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + + Q + + + +++G +++++D Sbjct: 277 VPDGFEIVRLVDRRQSQGTSAAAPKIVQTHVRHILLRVGEGKSEGQARQQLQDIRRQVEA 336 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 ++ G ++ + P+F+ + + P T+ G I Sbjct: 337 GGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQDGQISQPVRTEYGYHLI 396 Query: 271 AICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D+R+ G + + + K E+ A+++++LR ++ + Y Sbjct: 397 QVIDRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSYVQY 443 >gi|293392898|ref|ZP_06637215.1| peptidylprolyl cis-trans isomerase SurA [Serratia odorifera DSM 4582] gi|291424432|gb|EFE97644.1| peptidylprolyl cis-trans isomerase SurA [Serratia odorifera DSM 4582] Length = 433 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 106/303 (34%), Gaps = 16/303 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ + ++ + ++ ++ V+ + D++ + +KL L Sbjct: 7 LILGLVVCANAAFAAPQEVDKVAAVVDNGVVLESDVNGLLQSVKLNAQQAGQQLPDDKTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ ++ Q +K GI ++ A +S + S L +G+ N Sbjct: 67 RHQILERLIMDNIQLQMAKKMGINVTDADLDKAIGNIAAQNRMSIDQLRSRLAYEGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L E+ A +++ + + IP + Sbjct: 127 TYRSQIRKEMLITEVRNNEVRRRVTILPQEVDALAKQVGAQNGSDTEMNISHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 +Q V + A+ + + +++ + G + ++ F + Sbjct: 187 PSQQQVDEAETLAKRLIGEINSGADFGKLAITYSADSQALKGGNMGWGKLQEIPTLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDL----GGEIALKAYLSAQNTPTKIEKHEAEY 304 L+ + + P + G + + D R ++ + + + Sbjct: 247 LVSAKKGDVVGPIRSGVGFHILKVNDLRGASQSISVTEVHARHILLKPSVVMTDDQARAK 306 Query: 305 VKK 307 +++ Sbjct: 307 LEE 309 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 38/285 (13%), Positives = 84/285 (29%), Gaps = 17/285 (5%) Query: 47 NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 N EV I ++ + Q + I+ LI + + + Sbjct: 143 NNEVRRRVTILPQEVDALAKQVGAQNGSDTEMNIS-HILIPLPENPSQQQVDEAETLAKR 201 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-------FML 154 + A L+ + +G K +V Sbjct: 202 LIGEINSGADFGKLAITYSADSQALKGGNMGWGKLQEIPTLFAERLVSAKKGDVVGPIRS 261 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 G +++ + ++I+V E R +L +Q K + A + K Sbjct: 262 GVGFHILKVNDLRGASQSISVTEVHARHILLKPSVVMTDDQA-RAKLEEVAAAVKSGKAK 320 Query: 215 DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAI 272 ++ ++ + + G + P F++ L K + + P + G I + Sbjct: 321 FADEAKQLSQDPGSALQGGDLGWASPDIYDPAFRDALLKLQKGEVSQPVHSAFGWHLIQL 380 Query: 273 CDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 D R + + A K K + ++++ R+ A + Sbjct: 381 LDTRQVDKTDAAQKERAYRMLFNRKFAEEAQTWMQEQRAAAYVKI 425 >gi|115352813|ref|YP_774652.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria AMMD] gi|115282801|gb|ABI88318.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria AMMD] Length = 452 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 98/299 (32%), Gaps = 22/299 (7%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVETLK 86 ++ + +N +VIT ++ +R+ L+ + L + ++++E ++ Sbjct: 35 GAQLADEVVAVVNNDVITGRELDQRVGLIARRLQQQNAPVPPADQLRAQVLNQMVLERIQ 94 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 Q+ + GI D TV + A+ G++ E + + L+ QG+ + F + + Sbjct: 95 VQKAKDDGIRIDDATVQSTLQRLAQANGMTLEQYRARLEAQGVPWSVFTSDARTELMLSK 154 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMK----NITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + K + E+ + + + + QK+ Sbjct: 155 LREREVDGKITVSDAEVVNYIASQRGPSAAQQQDLRFQHIFIKAPTNAPQAEIEVAQKKA 214 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP-- 260 + + + + G + L + + K + NP Sbjct: 215 EALLQQATSGADFEKLAKNNSEANDAKKGGDLGFKAPGALPAEVVDAASKLRPGQVNPTL 274 Query: 261 YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLRSN 311 G E + + D+R G A ++ + K E + ++ +R Sbjct: 275 IRVPDGFEIVRLVDRRQSQGTSAAAPKIVQTHVRHILLRVGEGKSEGQARQQLQDIRRQ 333 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 30/287 (10%), Positives = 91/287 (31%), Gaps = 19/287 (6%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 ++G+ IT D ++ + + Q+ ++ + +K + Sbjct: 160 VDGK-ITVSD-AEVVNYIASQRGPSAAQQQDL-RFQHIFIKAPTNAPQAEIEVAQKKAEA 216 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN--------------D 151 +Q A + + + + + A ++ +VV Sbjct: 217 LLQQATSGADFEKLAKNNSEANDAKKGGDLGFKAPGALPAEVVDAASKLRPGQVNPTLIR 276 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + + Q + + + +++G +++++D Sbjct: 277 VPDGFEIVRLVDRRQSQGTSAAAPKIVQTHVRHILLRVGEGKSEGQARQQLQDIRRQVEA 336 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 ++ G ++ + P+F+ + + P T+ G I Sbjct: 337 GGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQDGQISQPVRTEYGYHLI 396 Query: 271 AICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D+R+ G + + + K E+ A+++++LR ++ + Y Sbjct: 397 QVIDRRESEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSYVQY 443 >gi|78067506|ref|YP_370275.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. 383] gi|122070639|sp|Q39D35|SURA_BURS3 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|77968251|gb|ABB09631.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. 383] Length = 452 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 98/302 (32%), Gaps = 22/302 (7%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVE 83 + ++ + +N +VIT ++ +R L+ + L + ++++E Sbjct: 32 GSQGAQLADEVVAVVNNDVITGRELDQRAGLIARRLQQQNAPVPPTDQLRAQVLNQMVLE 91 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 ++ Q+ + GI D TV + A+ G++ E + L+ QG+ + F + + Sbjct: 92 RIQVQKAKDDGIRIDDATVQSTLQRLAQANGMTLEQYRGRLEAQGVPWSVFTSDARTELM 151 Query: 144 WPDVVKNDFMLKYGNLEMEIPAN----KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + K + E+ + + + + + + Q Sbjct: 152 LSKLREREVDGKITVSDAEVANYIASQRGPNASQQQDLRFQHIFIKAPTNAPQADIEAAQ 211 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 K+ + + + G + S L + K + N Sbjct: 212 KKADALLQQAKSGADFEKLAKNNSEANDAKKGGDLGFKAPSALPADVVDAASKLRPGQVN 271 Query: 260 P--YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLR 309 P G E + + D+R G A ++ + K E + + +R Sbjct: 272 PTLIRVPDGFEIVRLVDRRQSQGATAAAPKIVQTHVRHILLRVGEGKSEGQARQQLADIR 331 Query: 310 SN 311 + Sbjct: 332 NQ 333 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 30/287 (10%), Positives = 89/287 (31%), Gaps = 19/287 (6%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 ++G+ IT D ++ + Q+ ++ + +K + Sbjct: 160 VDGK-ITVSD-AEVANYIASQRGPNASQQQDL-RFQHIFIKAPTNAPQADIEAAQKKADA 216 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN--------------D 151 +Q A++ + + + + A ++ DVV Sbjct: 217 LLQQAKSGADFEKLAKNNSEANDAKKGGDLGFKAPSALPADVVDAASKLRPGQVNPTLIR 276 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + + Q + + + +++G ++++ D Sbjct: 277 VPDGFEIVRLVDRRQSQGATAAAPKIVQTHVRHILLRVGEGKSEGQARQQLADIRNQVEA 336 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 ++ G ++ + P+F+ + + P T+ G I Sbjct: 337 GGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQDGQISQPIRTEYGYHLI 396 Query: 271 AICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +R+ G + + + K E+ A+++++LR ++ + Y Sbjct: 397 QVLSRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSYVQY 443 >gi|253701697|ref|YP_003022886.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21] gi|251776547|gb|ACT19128.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21] Length = 341 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 36/287 (12%), Positives = 90/287 (31%), Gaps = 13/287 (4%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKIN------GELEKIAVQELIVETLKKQEIEKSG 94 + +NG+ I ++ + +L + ELEK A+ +L+ L Q Sbjct: 52 EVVARVNGKEIHRNELERSKKILMAGQPGIPPYLLKELEKQALDQLVGAELMYQAGL-GL 110 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 D + + + ++ + + L G+ + ++Y + ++V Sbjct: 111 QIKDLDRMADAKLVQIKSGFKDQQVYEKELANIGMTEQMLREYSRRDLVIANLVNTKLAA 170 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 ++EI ++ +R I + +K AE + + Sbjct: 171 DLQVTDLEIEKFYADNPERFEQKEQVRASHILIGCDSKGTAEEKKKARDKAERLLKEVKE 230 Query: 215 DCNKLE---KFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + + + ++ + G Y + P F+ ++ T G + Sbjct: 231 GADFAKLARENSTCPSATNGGDLGYFPRGKMVPPFEEAAFALKSGEVSDVVETGFGFHLV 290 Query: 271 AICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 D+ + + A K + A ++ + + +A I Sbjct: 291 KQTDRIKAEKVSLATAREKIVAYLKSQKTGEVVASFIGRAKQDAKIE 337 >gi|306838742|ref|ZP_07471576.1| Chaperone surA precursor [Brucella sp. NF 2653] gi|306406144|gb|EFM62389.1| Chaperone surA precursor [Brucella sp. NF 2653] Length = 317 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 69/314 (21%), Positives = 132/314 (42%), Gaps = 10/314 (3%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWA---MSSRIRTTINGEVITDGDISKRIALLKLQK 67 F + L + C+ + + + A S ++ ++G IT+ DI R+A LKLQ+ Sbjct: 1 MFARPLIASLLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQR 60 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 +G L ++A EL E LK+ E++ GI V+ + A ++ + +++ Sbjct: 61 KSGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQS 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 G+ HFK+Y+ +Q W +V F E E K Sbjct: 121 GVTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVIF 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF- 246 + + + + + ++C+ + A I DV++ ++E L ++ Sbjct: 181 VVPASKRSPALLAKRRQEANALRARFQNCDSTRQQAKGILDVTVRDLGRIIEPQLPGEWS 240 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ------NTPTKIEKH 300 +++ N TT P+ T+KGVE++A+C R + + + S + K E+ Sbjct: 241 KDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKAEEL 300 Query: 301 EAEYVKKLRSNAII 314 +YV++LR A I Sbjct: 301 SKKYVQELREKATI 314 >gi|254480950|ref|ZP_05094196.1| SurA N-terminal domain family protein [marine gamma proteobacterium HTCC2148] gi|214038745|gb|EEB79406.1| SurA N-terminal domain family protein [marine gamma proteobacterium HTCC2148] Length = 425 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 105/312 (33%), Gaps = 12/312 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK----- 67 IK + L + ++ M ++ + ++I ++ +R+ + Sbjct: 3 IKAMLLGTCLTASALATGLARAETQMLDQVIAVVEDDIIMASELRERMTSVTENISTRGV 62 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + + LI+E+++ Q+ + G+ +N + A GLS + F L Sbjct: 63 EMPPEDVLIRETLDRLILESIQMQKGARVGVRISDTQLNGAMQRVAAQNGLSLDQFRMAL 122 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++QG ++ + + I V + + + E E+ + + + + + Sbjct: 123 EQQGQSYQVMREQIRKELIIQRVQQGNVNQRIEITEQEVENFLATEEGQKLTQPEYQIMH 182 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLH 243 + + V++ + E ++ ++ + G + DL Sbjct: 183 ALLAVSPGAPAAEVERAEAYVTRLLEEISAGAPFDEVVSAPGPYNFTGGNLGWRKLDDLP 242 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F ++ T + G + + D+R ++ ++ + + + Sbjct: 243 SLFSDVAPGLSKGKTTLVKSDSGFHLVHMADRRGGENMMVSQTKVRHILVKPSEIMTDGQ 302 Query: 301 EAEYVKKLRSNA 312 V L++ A Sbjct: 303 AKALVTSLKARA 314 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 29/281 (10%), Positives = 85/281 (30%), Gaps = 16/281 (5%) Query: 46 INGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 +N + IT+ ++ +A + QK+ + I+ L + Sbjct: 150 VNQRIEITEQEVENFLATEEGQKLTQPEYQ------IMHALLAVSPGAPAAEVERAEAYV 203 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS------IWPDVVKNDFMLKYGN 158 + + G ++ S + + P + K L + Sbjct: 204 TRLLEEISAGAPFDEVVSAPGPYNFTGGNLGWRKLDDLPSLFSDVAPGLSKGKTTLVKSD 263 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + + + + + +++ G + + + + Sbjct: 264 SGFHLVHMADRRGGENMMVSQTKVRHILVKPSEIMTDGQAKALVTSLKARAEDGEDFADL 323 Query: 219 LEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276 +++ I G + + P+F+ ++ + ++P +Q G + + D+R Sbjct: 324 AREYSEDIGSAQEGGDLGWTDPGQMVPEFEQTMQITAVGEISDPVKSQFGWHVLEVLDRR 383 Query: 277 DLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 D + A K K ++ +++++R A + Sbjct: 384 DEDMTDTATKNMAMNYLHNRKYQEELDAWLRQIRDEAFVDI 424 >gi|238752276|ref|ZP_04613756.1| Chaperone surA [Yersinia rohdei ATCC 43380] gi|238709544|gb|EEQ01782.1| Chaperone surA [Yersinia rohdei ATCC 43380] Length = 434 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 106/296 (35%), Gaps = 16/296 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ + ++ + ++ ++ V+ D+ + +KL G L Sbjct: 7 LILGLVVCANTAFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQAGQQVPDDGTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K GIT ++ A ++ S L G+ + Sbjct: 67 RHQVLERLIMDNILLQMAKKMGITVSDEALDKAIADIAAQNRMTPAQMRSRLAADGLNYD 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +++ + + + +V N+ + L E+ + +++ N T + + IP + Sbjct: 127 TYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQIGNQTSGDAELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 +Q V + + A++ + + ++ + G+ + +L F + Sbjct: 187 PSQQQVDQAEELAKKLASDIKAGADFGKLAIANSADSQALKGGQMGWGKLQELPSLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKH 300 L + + P + G + + D R + ++ + +P + Sbjct: 247 LQSAKKGDIVGPIRSGVGFHILKVNDIRGADKTVSVTELHARHILLKPSPVMTDDQ 302 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 17/140 (12%), Positives = 43/140 (30%), Gaps = 3/140 (2%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238 + P + + K A + + ++ + + G + Sbjct: 286 HARHILLKPSPVMTDDQARAKLSAAAADIKSGKASFATIAKEISQDPGSAMQGGDLGWAS 345 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTK 296 P F++ + K + + P + G I + D R + + A K K Sbjct: 346 PDIYDPAFRDAVMKLQKGEISAPVHSSFGWHLIQLVDSRQVDKTDAAQKDRAYRMLFSRK 405 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 + ++++ R+ A + Sbjct: 406 FAEEAQTWMQEQRAAAYVKI 425 >gi|83591773|ref|YP_425525.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodospirillum rubrum ATCC 11170] gi|83574687|gb|ABC21238.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodospirillum rubrum ATCC 11170] Length = 444 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 116/313 (37%), Gaps = 10/313 (3%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL---- 63 +L + + +V ++ C P+ + ++ + RI +N + ++ D++ RI ++ Sbjct: 26 ALGRLLGIALLAWVAVLGCGWPVHTAQAAVPTQRIAAVVNEDAVSLYDLNARIDIVMATG 85 Query: 64 ---KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 ++ L ++ LI ETLK QE +++ +T + +N + R L Sbjct: 86 GMPNSPEVRQRLAPQILRALIDETLKIQEAKRANVTVSTEDINGGIERLERQNKLPPGGL 145 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 G+ + + W V++ + E EI +Q ++ + + Sbjct: 146 EKAFKAAGLDQQSLIHQIRAELGWIKAVQSTLGPRVNVSEDEISLYQQNLQRNLGKPEYL 205 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 +F DN Q+ + + E+ RL ++F+ G ++ Sbjct: 206 VADIFLPVDNAAQDAEVLTAAQRMIEQMRL-GANFAALAQQFSRGPAAQRGGDLGWVGPG 264 Query: 241 DLHPQ-FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI-E 298 ++ + Q L + N + P T G + + D+R G + +S P + Sbjct: 265 EIDAEVLQALGAMAPGNLSQPIRTFGGYHILLLRDQRIASGGASSLLKMSRIVIPLRGPR 324 Query: 299 KHEAEYVKKLRSN 311 E + LR Sbjct: 325 MPTPERLADLRQR 337 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 3/86 (3%) Query: 232 GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 G + + L + QN+++ + P + ICD+ G + + L Sbjct: 359 GSMGSIDPARLPAEAQNVIRDLPAGQPSTPLTMDNAEIRLMICDR--PTGGLPGRDILRE 416 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K++ ++ LR AII Sbjct: 417 RLIEQKLQNLAQRRLRDLRQQAIIDI 442 >gi|220932946|ref|YP_002509854.1| peptidil-prolyl cis-trans isomerase [Halothermothrix orenii H 168] gi|219994256|gb|ACL70859.1| peptidil-prolyl cis-trans isomerase [Halothermothrix orenii H 168] Length = 332 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 99/338 (29%), Gaps = 41/338 (12%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI-- 68 F + + + L++ +++ + I ++G+ IT ++ + + Sbjct: 2 RFRRSVFLFLALVLVISFSVLAEDKVEKTDNIAAVVDGKEITISEVDEYARTRDVIMQLY 61 Query: 69 -------------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTV----NYF 105 E K+ + ELI L +E + GI + N Sbjct: 62 QANGEFTQLILSTEAGNELINEYRKLKLDELITRELLIKEAKNQGINVSKEEMDKIFNEQ 121 Query: 106 FVQHARNTGLSAEDFSSFLDKQG----IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 + ++ E L++QG + + + ++ M E Sbjct: 122 IEMVKQKNNINEEQLLQALNQQGIESLDQYKNLFFEQNGDLLLINKLREKVMEDVSVEES 181 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + K I+ +K ++ ++ Sbjct: 182 AVREYYDNNKENFKHGTQIKARHIL---------VETEKEAREILNELENGADFGEMAKE 232 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK--RDL 278 +++ + G Y + + P+F+ ++P TQ G I + DK + Sbjct: 233 YSTGPSSKNGGDLGYFGKGRMVPEFEEAAFALKVGQISDPVKTQYGYHIIKVEDKVEEGI 292 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +K + K + ++K+LR A I Sbjct: 293 TPFDEVKDKIKNNLLQQKQQTAWNNFLKELRDKAEIEI 330 >gi|261493819|ref|ZP_05990333.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495044|ref|ZP_05991511.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309286|gb|EEY10522.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310522|gb|EEY11711.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 314 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 107/316 (33%), Gaps = 17/316 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +KL+ + F + + + ++ + A R+ +N I + + +L +K Sbjct: 1 MKLVKSLFAVAVATMS--LTQTAHAFEERVVALVNDTPIMQSQVQR---VLGKKKATETA 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ A+ ++I + L +Q ++++G+ VN A G++ LD QGI Sbjct: 56 QRAAIDQVIDDMLVQQAMKEAGVKVSPAAVNQAVENVAIQNGITYGQLLDALDYQGITLE 115 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV---------REYLIRTV 183 FK+ +A Q V ++ A +++ + + Sbjct: 116 QFKRNIAQQMAMEQVRHISISKSIQVAPQQVQALAKELMAKDKAAGKLKTVSGKEHRISH 175 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 + + L + K + + + G + Sbjct: 176 ILLKTNPILNDAQAKAKLSSLTADINSGKISFEEAAKAHSVDYASGTDGGDLGFNFLEIY 235 Query: 243 HPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKH 300 P F N+ K N + P+ +Q G + + D R+ Q + E+ Sbjct: 236 DPAFANVASKIKPNQISAPFKSQFGWHILKVTDTRNGDRTEDAYHQRAYQQLVNKQAEEA 295 Query: 301 EAEYVKKLRSNAIIHY 316 ++VK LR A I Y Sbjct: 296 SKDWVKALRKTANIQY 311 >gi|158521718|ref|YP_001529588.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfococcus oleovorans Hxd3] gi|158510544|gb|ABW67511.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfococcus oleovorans Hxd3] Length = 316 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 103/307 (33%), Gaps = 18/307 (5%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL------------EK 74 + + + RI +N E+I ++ K +AL + +L + Sbjct: 7 LTSCRADTEAEVVDRIVAFVNQEIILLSELEKAMALYETAIRERQLPADTEKEMLYRARQ 66 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + LI L +Q ++ G+T D V+ + R+ + ED L ++G + Sbjct: 67 EMIDHLIDRRLIQQRADELGVTVDDREVDDAMERMKRSMLFTDEDLRQSLAEKGYTLEGY 126 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR---TVLFSIPDNK 191 + L Q + V+ + K ++I A + ++ D Sbjct: 127 RNELREQILRQRVLTLEVKSKVVVTPVDIQAYYETHPEEYSAGRQYHLRNIIMRVDKDMP 186 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 +++ + + ++ + +++ G + DL PQ + ++ Sbjct: 187 DESKKTISEMMQKIHDRLQAGESFETLASQYSQSSFAEKGGDLGFFALEDLAPQLREAIE 246 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + T T G + + + + + + + +E+ ++V +L Sbjct: 247 ELQAGEFTPVLDTPLGYQILYLEEIQEKPAVSLEKATDEIREKLYEDLLEERFEKWVTEL 306 Query: 309 RSNAIIH 315 R + I Sbjct: 307 REKSHIK 313 >gi|271502081|ref|YP_003335107.1| Peptidylprolyl isomerase [Dickeya dadantii Ech586] gi|270345636|gb|ACZ78401.1| Peptidylprolyl isomerase [Dickeya dadantii Ech586] Length = 430 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 103/303 (33%), Gaps = 16/303 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ + +++ + ++I ++ V+ + DI+ + +KL L Sbjct: 7 LVLGLALSANMAFAAPQEVNKIAAVVDNSVVLESDINSLLQSVKLNAQEAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A +S + S L +G+ + Sbjct: 67 RHQILERLIMDNIIMQMAQKMGVQVTDEQLDRSITNIAAQNHMSLDQLRSRLAAEGVSFD 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + DV ++ + L E+ A Q++ + + IP + Sbjct: 127 TYRSQIRKDMMIADVRNSEVRRRVTVLPQEVDALAQQLASQGANGPEVNLSQILIPLPEN 186 Query: 193 QNQGFVQKRIKDAE---ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 Q V K A + + +++ + G+ + +L F + Sbjct: 187 PTQDQVDKAESLANRLVKEASQGADFGKLAITYSADPQALKGGQMGWGRPQELPSLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRD----LGGEIALKAYLSAQNTPTKIEKHEAEY 304 L + P + G + + D R + ++ + + Sbjct: 247 LANPQKGQIIGPIRSGVGFHILRVNDTRGGSQAVSVTEVHARHILLTTSVVMNDAQAKAK 306 Query: 305 VKK 307 +++ Sbjct: 307 LEE 309 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 16/140 (11%), Positives = 41/140 (29%), Gaps = 3/140 (2%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238 + + + K + A + R ++ + G + Sbjct: 286 HARHILLTTSVVMNDAQAKAKLEEVASQIRSGKLSFAAAAKQLSQDPGSANQGGDLGWAS 345 Query: 239 ESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTK 296 P F++ + + + P + G I + D R + + A K K Sbjct: 346 PDMYDPAFRDALMDLKKGEISAPVHSSFGWHLIQLLDTRQVDKTDAAQKDRAYRMLFNRK 405 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 + ++++ R+ A + Sbjct: 406 FAEEAQTWMQEKRAAAYVKI 425 >gi|85713800|ref|ZP_01044790.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter sp. Nb-311A] gi|85699704|gb|EAQ37571.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter sp. Nb-311A] Length = 305 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 92/313 (29%), Gaps = 47/313 (15%) Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---SKRIALL 63 T S ++L ++ + ++ + + A + + +NG I D+ + + Sbjct: 8 TKHSLRVRLASSALGGCLAAVLFVGTPVHAADADPVLAKVNGTEIHQSDVNLAEQELGPS 67 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 Q ++ + LI + + E+ I Sbjct: 68 LAQMDPAAKQENILSFLIDMKIITKAAEEKKIENSEEFKKRL------------------ 109 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + + + ++ + + M+ + + +E R + Sbjct: 110 ------------AFARDRLLMDRLLASQGKAAITDDAMKTVYADASKQITSEQEVHARHI 157 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 L D + +G ++K +K + G + + + Sbjct: 158 LVPTEDEAKKIEGELKK-----------GADFAELAKKESKDPGASDGGDLGFFTKEQMV 206 Query: 244 PQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 P+F + ++P TQ G I + +KR + Q K +A Sbjct: 207 PEFSKVAFALEPGKISDPVKTQFGWHIIKVEEKRARKA--PDFDQVKPQIEQFVTRKAQA 264 Query: 303 EYVKKLRSNAIIH 315 EYV KLR A I Sbjct: 265 EYVAKLRETAKIE 277 >gi|238795196|ref|ZP_04638783.1| Chaperone surA [Yersinia intermedia ATCC 29909] gi|238725483|gb|EEQ17050.1| Chaperone surA [Yersinia intermedia ATCC 29909] Length = 434 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 108/301 (35%), Gaps = 16/301 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72 +++ + ++ + ++ ++ V+ D+ + +KL L Sbjct: 7 LILGLVVCANTAFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQSGQQVPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ ++ Q +K GIT + ++ A ++ S L G+ + Sbjct: 67 RHQILERLIMDNIQLQMAKKMGITINDEALDKAIADIAAQNRMTTAQMRSRLAADGLNYD 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +++ + + + +V N+ + L E+ + +++ N T + + IP + Sbjct: 127 TYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQIGNQTSGDAELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 +Q V + + A + + + ++ + G+ + +L F + Sbjct: 187 PSQQQVDQAEELATKLVSDIKSGADFGKLAIANSADSQALKGGQMGWGKLQELPSLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 L ++ + P + G + + D R + ++ + +P + Sbjct: 247 LQSANKGDVVGPIRSGVGFHILKVNDIRGADKTISVTEVHARHILLKPSPVMTDDQARTK 306 Query: 305 V 305 + Sbjct: 307 L 307 Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 54/168 (32%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + K I+V E R +L +Q K A + + Sbjct: 259 IRSGVGFHILKVNDIRGADKTISVTEVHARHILLKPSPVMTDDQART-KLAAAAADIKSG 317 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269 ++ + V G + P F++ +K + + P + G Sbjct: 318 KSSFATIAKEISQDPGSAVQGGDLGWASPDIYDPAFRDALMKLQKGEISAPVHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R+ A + Sbjct: 378 IQVVDTRQVDKTDAAQKDRAYRMLFSRKFAEEAQTWMQEQRAAAYVKI 425 >gi|90411942|ref|ZP_01219950.1| putative survival protein SurA [Photobacterium profundum 3TCK] gi|90327200|gb|EAS43572.1| putative survival protein SurA [Photobacterium profundum 3TCK] Length = 434 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 112/314 (35%), Gaps = 15/314 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +K + I + S + ++ T +N VI D++ + +++ Sbjct: 1 MKKWKISLLGIAIWSLAASSMAAPKELDKVVTLVNDSVILQSDVNAMLQTVRINAAEQNQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LI+ETL+ Q+ E+ GI D ++ + A+ L+ L Sbjct: 61 PLPDNALLTEQVMEKLIIETLQLQQAEQFGIRIDDTRLDQAVAEIAKERELTIPQLQQEL 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 +K GI + F++ + + + L E+ +++ T++ Sbjct: 121 EKSGISYSIFREQMRRDMTASEARTIQVRRRINILPQEVDMLAEQLNKQTLQTVQFNISH 180 Query: 185 FSIPDNKLQN---QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + + + Q++ + + N ++ + G+ ++ + + Sbjct: 181 IQLRVEEGATKVQREETQQQAQQLVDELKNGADFANLAYSYSKGPKALQGGEWGWMRQEE 240 Query: 242 LHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297 + F + +K + + P+ + G I + D + + ++ + + Sbjct: 241 MPTIFADQIKSNGKGAIIGPFRSGVGYHIIKVNDVKGLETVSVTEVNARHILIKTSVILS 300 Query: 298 EKHEAEYVKKLRSN 311 + ++K R + Sbjct: 301 DDGAKRQLEKARQD 314 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 34/273 (12%), Positives = 83/273 (30%), Gaps = 9/273 (3%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ L Q + I+ +L VE ++++ + + A Sbjct: 154 ILPQEVDMLAEQLNKQTLQTVQFNISHIQLRVEEG-ATKVQREETQQQAQQLVDELKNGA 212 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 L+ QG +Q + N G + + K+ Sbjct: 213 DFANLAYSYSKGPKALQGGEWGWMRQEEMPTIFADQIKSNGKGAIIGPFRSGVGYHIIKV 272 Query: 171 KNITV------REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 ++ E R +L + Q + R + + Sbjct: 273 NDVKGLETVSVTEVNARHILIKTSVILSDDGAKRQLEKARQDILAGRQTFADEAQKLSSD 332 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEI 282 + G+ + P+F++ ++ + + P+ T G + + ++R++ + Sbjct: 333 PGSAANGGELGWQTPDLYVPEFKDKVETLPKGTISEPFKTVHGWHIVEVLERRNVDRTDA 392 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 A+K K + ++++LR+ A I Sbjct: 393 AVKNRAYRILFSRKFNEEAQAWLQELRAGAYIE 425 >gi|189423767|ref|YP_001950944.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter lovleyi SZ] gi|189420026|gb|ACD94424.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter lovleyi SZ] Length = 355 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 94/300 (31%), Gaps = 17/300 (5%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING---------ELEKIAVQELIVET 84 + + +N ++IT ++ + + L + + LI + Sbjct: 49 AGAKRINGVAAIVNDDIITFREVLRESQAVIQDAQKKGLVDDTARHNLRVMVLDRLIEKL 108 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHA-RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 L +Q+I++ GI + + +N ++ + L QG ++ L Q Sbjct: 109 LTEQKIKELGIKIGDDEIRQAIDDVKRQNNNMTQSQLEAALKSQGYTFAQYEVQLREQLE 168 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 +V + K E E Q + E + I ++ +Q+ + Sbjct: 169 RLRLVSMEVRSKIYVSEKEAEEYYQSHLSSYAEEETFKASHIFIKVDEKAPADQIQQAMN 228 Query: 204 DAEESRL---RLPKDCNKLEKFASKIHDVS-IGKAQYLLESDL-HPQFQNLLKKSQNNTT 258 A + + +++ G ++ + +L Sbjct: 229 KALKVLFEARQGKDFAQLAREYSDDAAAKKDGGSLGTFKRGEMLADLEKAILPLKPGEVG 288 Query: 259 NPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 T G+ + + ++ + +KA +S K + ++K+LR+ A I Sbjct: 289 ELVSTPSGLHIVKLDERSSGKVKPFETVKADISDLLYRQKQDSRFTSWMKELRTKASIEI 348 >gi|254718820|ref|ZP_05180631.1| Chaperone surA precursor [Brucella sp. 83/13] gi|265983805|ref|ZP_06096540.1| SurA domain-containing protein [Brucella sp. 83/13] gi|264662397|gb|EEZ32658.1| SurA domain-containing protein [Brucella sp. 83/13] Length = 318 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 69/314 (21%), Positives = 132/314 (42%), Gaps = 10/314 (3%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWA---MSSRIRTTINGEVITDGDISKRIALLKLQK 67 F + L + C+ + + + A S ++ ++G IT+ DI R+A LKLQ+ Sbjct: 2 MFARPLIASLLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQR 61 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 +G L ++A EL E LK+ E++ GI V+ + A ++ + +++ Sbjct: 62 KSGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQS 121 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 G+ HFK+Y+ +Q W +V F E E K Sbjct: 122 GVTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVIF 181 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF- 246 + + + + + ++C+ + A I DV++ ++E L ++ Sbjct: 182 VVPASKRSPALLAKRRQEANALRARFQNCDSTRQQAKGILDVTVRDLGRIIEPQLPGEWS 241 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ------NTPTKIEKH 300 +++ N TT P+ T+KGVE++A+C R + + + S + K E+ Sbjct: 242 KDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKAEEL 301 Query: 301 EAEYVKKLRSNAII 314 +YV++LR A I Sbjct: 302 SKKYVQELREKATI 315 >gi|251793857|ref|YP_003008589.1| SurA [Aggregatibacter aphrophilus NJ8700] gi|247535256|gb|ACS98502.1| SurA [Aggregatibacter aphrophilus NJ8700] Length = 308 Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 104/310 (33%), Gaps = 19/310 (6%) Query: 20 FVLIIFCIVPIVSY-KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78 + F V I++ + ++ T+NG + + + + A+ Sbjct: 3 LKSVFFSAVGILALVANVQAEEKVVATVNGIPVLESQVQ------SALNKKTNNRQAALN 56 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 ++I + L Q +++SG+ ++ V+ A GL+ LD QGI ++Q + Sbjct: 57 KVIDDILVDQAVQESGVKVNNAQVDKIIEGIAAQNGLTFGQLLDALDYQGISYRAYRQQI 116 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV---------REYLIRTVLFSIPD 189 A Q + +V + ++ A +KM + + + Sbjct: 117 AQQVMMSEVRNHAISQSVDISREQVEALAKKMLDEAKSKGSVAKVSDTQYEVRHILLKLN 176 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY-LLESDLHPQFQ 247 L + + + + + K++ + G Y E + P Q Sbjct: 177 PLLNDAQAKAQLEQIRADIIAGKMTFADAALKYSKDYLSGANGGSLGYAFPEMYVGPFNQ 236 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVK 306 + Q + P+ T+ G + + + R Q +++ ++V+ Sbjct: 237 AIRTTKQGVISAPFKTEFGWHILEVTNTRQGDRTEDAYRQKAYEQIVNQQLQDSARDWVQ 296 Query: 307 KLRSNAIIHY 316 LR A I Y Sbjct: 297 ALRKRADIKY 306 >gi|54307618|ref|YP_128638.1| putative survival protein SurA [Photobacterium profundum SS9] gi|81697526|sp|Q6LV39|SURA_PHOPR RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|46912041|emb|CAG18836.1| putative survival protein SurA [Photobacterium profundum SS9] Length = 434 Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 115/314 (36%), Gaps = 15/314 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +K + + I + S + ++ T +N VI D++ + +++ Sbjct: 1 MKKWKSSLLGIAIWSLAASSMAAPKELDKVVTLVNDSVILQSDVNAMLQTVRINAAEQNQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + +++LI+ETL+ Q+ E+ GI D ++ + A+ L+ L Sbjct: 61 PLPDDALLTEQVMEKLIIETLQLQQAEQFGIRIDDTRLDQAVAEIAKERELTIPQLQKEL 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 +K GI + F++ + + + L E+ +++ T++ Sbjct: 121 EKSGISYSIFREQMRRDMTASEARTIQVRRRINILPQEVEMLAEQLNKQTLQTVQFNISH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLLESD 241 + + + ++ + A++ L + ++ + G+ ++ + + Sbjct: 181 IQLRVEEGATKEQREETQQQAQQIVDELKNGADFANLAYSYSKGPKALQGGEWGWMRQEE 240 Query: 242 LHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297 + F + +K + + P+ + G I + D + + ++ + + Sbjct: 241 MPTIFADQIKSNGKGAIIGPFRSGVGYHIIKVNDVKGLETVSVTEVNARHILIKTSVILS 300 Query: 298 EKHEAEYVKKLRSN 311 + ++K R + Sbjct: 301 DDGAKRQLEKARQD 314 Score = 84.7 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 34/273 (12%), Positives = 87/273 (31%), Gaps = 9/273 (3%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVE----TLKKQEIEKSGITFDSNTVNYFF 106 I ++ L Q + I+ +L VE +++E ++ N Sbjct: 154 ILPQEVEMLAEQLNKQTLQTVQFNISHIQLRVEEGATKEQREETQQQAQQIVDELKNGAD 213 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD--VVKNDFMLKYGNLEMEIP 164 + + + + A Q + F G +++ Sbjct: 214 FANLAYSYSKGPKALQGGEWGWMRQEEMPTIFADQIKSNGKGAIIGPFRSGVGYHIIKV- 272 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + + ++ ++V E R +L + Q + R + + Sbjct: 273 NDVKGLETVSVTEVNARHILIKTSVILSDDGAKRQLEKARQDILAGRQTFADEAQKLSSD 332 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEI 282 + G+ + P+F++ ++ + + P+ T G + + D+R++ + Sbjct: 333 PGSAANGGELGWQTPDLYVPEFKDKIETLPKGTISEPFKTVHGWHIVEVLDRRNVDRTDA 392 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 A+K K + ++++LR+ A I Sbjct: 393 AMKNRAYRILFSRKFNEEAQAWLQELRAGAYIE 425 >gi|109899724|ref|YP_662979.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudoalteromonas atlantica T6c] gi|122070658|sp|Q15QB3|SURA_PSEA6 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|109702005|gb|ABG41925.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudoalteromonas atlantica T6c] Length = 431 Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 101/312 (32%), Gaps = 15/312 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--- 71 + T + + ++ + ++ V+ + I + + +K + Sbjct: 1 MKLTVVTFALLAFISFNTFAKQVRLDNVAVIVDQGVVLESQIEELVNTVKRNALTNNQTL 60 Query: 72 -----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 L A++ LIV++L+ Q E+ GI ++ AR G + ED L Sbjct: 61 PSDRVLRTQAIERLIVDSLQNQMAERMGIQISDPQLDQTIDNIAREDGTTVEDLRKNLAS 120 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 +G+ +++ + + + +V + + + EI + ++ Sbjct: 121 EGVSFEVYREQVRKELVTGEVRRANVRRRIYITPQEISNLVTLIDEQGGQQAEYHLGHIL 180 Query: 187 IPDNKLQNQGFVQKRIK---DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 I V K E + +S + G ++ + + Sbjct: 181 IGFPPEPTDEDVSKAKDTAEKVLELLNNGSEFAKIATASSSGSKALEGGDLGWMNINSMP 240 Query: 244 PQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTKIEK 299 F + + S+++ P + G + I D R + + ++ + + ++ Sbjct: 241 TLFAEAVQGTSKDDLIGPIRSGAGFHVLKIIDFRGIEKVEVAELKSRHILIKPSVILSDE 300 Query: 300 HEAEYVKKLRSN 311 + + + R Sbjct: 301 KAEKMLTEFRKE 312 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 44/137 (32%), Gaps = 3/137 (2%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 + P L ++ + + +E ++ ++ + G + + Sbjct: 287 RHILIKPSVILSDEKAEKMLTEFRKELLAGEADFAELAKEHSADPGSALRGGDLGWADPN 346 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSAQNTPTKIE 298 P F++ L+ + P + G + + DKR K K Sbjct: 347 VYVPAFRDTLQSLEVGEISQPVRSTHGWHLMQLMDKRVQDATEKRKEDKAYQLLFQRKFA 406 Query: 299 KHEAEYVKKLRSNAIIH 315 + ++K++R +A + Sbjct: 407 EETEAWLKEMRDSAYVE 423 >gi|119504985|ref|ZP_01627062.1| Parvulin-like peptidyl-prolyl isomerase [marine gamma proteobacterium HTCC2080] gi|119459271|gb|EAW40369.1| Parvulin-like peptidyl-prolyl isomerase [marine gamma proteobacterium HTCC2080] Length = 436 Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 36/322 (11%), Positives = 109/322 (33%), Gaps = 11/322 (3%) Query: 3 SKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL 62 SK + ++ L + ++ + ++ ++ ++I ++ +R+ L Sbjct: 5 SKAMLMSTLYLPRLAATLATLACIVLAPWANAQIQTLDKVVAIVDDDIILATELQERLLL 64 Query: 63 LKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 ++ + L + + LI+E+++ Q + G+ ++ + A + Sbjct: 65 IQRNIEQRQIDAPPDEVLARETLDRLILESIQLQLANRYGVRIPDAQLDAAMARMASGSN 124 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 + E F + ++ G ++ + + + V + + E E+ Sbjct: 125 YTLEQFRAAVEANGQSYLAMREEIRREMMIQRVQQGNVSRNIEISEQEVDNFLSTEAGAE 184 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGK 233 + + R + + +K ++ QK+ + + + E + + + G Sbjct: 185 MTQPEFRVIQALVEVSKKDSKADRQKKEDFVDGILASILAGKDFPEAVSVIEPYVFKGGD 244 Query: 234 AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQ 291 + + F ++ + T + G + + D+ R+ E ++ + Sbjct: 245 LGWKKLDAIPSMFAAVIPSLKVGDTAKVASGAGFHLVYLADERGRERLVEQTEVRHILIK 304 Query: 292 NTPTKIEKHEAEYVKKLRSNAI 313 T E +LR A+ Sbjct: 305 PTEVLDEDAAIALATELRQRAM 326 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 22/272 (8%), Positives = 78/272 (28%), Gaps = 4/272 (1%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 I++ ++ ++ + + E +Q L+ + K + ++ + + + Sbjct: 165 NIEISEQEVDNFLST-EAGAEMTQPEFRVIQALVEVSKKDSKADRQKKEDFVDGILASIL 223 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + +G ++ + +K K + Sbjct: 224 AGKDFPEAVSVIEPYVFKGGDLGWKKLDAIPSMFAAVIPSLKVGDTAKVASGAGFHLVYL 283 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI- 226 + I ++ ++ + + + ++++ I Sbjct: 284 ADERGRERLVEQTEVRHILIKPTEVLDEDAAIALATELRQRAMDGEDFGALAKEYSDDIG 343 Query: 227 HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG-GEIAL 284 G+ + + P+F + + P +Q G + + +R+ E Sbjct: 344 SAQEGGELGWTSPGQMVPEFDATMATTEVGEISYPVKSQFGWHILEVTGRREENIAEQMR 403 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + K ++ +++K+R A + Sbjct: 404 RQQVMGYLHDQKYDEELEAWLRKIREEAFVDI 435 >gi|283850614|ref|ZP_06367901.1| SurA domain protein [Desulfovibrio sp. FW1012B] gi|283573857|gb|EFC21830.1| SurA domain protein [Desulfovibrio sp. FW1012B] Length = 330 Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 110/329 (33%), Gaps = 26/329 (7%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69 + L ++++ + + + + ++ +NG++IT D++ R+A L + Sbjct: 1 MPRLPKICLMLVLLVALTTTAWATQLVDKVVAVVNGKLITMFDVNARLADLLQRTQGVSM 60 Query: 70 -------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 EL + ++ +I + L +QE + ++ ++ + + L+ + F + Sbjct: 61 RPDDPQAAELRRQVLESMINDILIEQEAARLKVSISETELDSQIDEIKKKNNLTQQQFVA 120 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 L+K+G+ F++ + + S+ ++ K + EI +K K I Sbjct: 121 ELNKEGMTLKDFRERMRLDSVKKRLLGFMVHRKVLVTDDEIRDYYEKNKGALPTAKSILG 180 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 S + ++ + K + +K++ G + DL Sbjct: 181 PKVSGTIGFIM-VATKKQADDLRAQITSGSLKFSDAAKKYSIGPGRDQGGDLGDVQAKDL 239 Query: 243 -HPQFQNLLKKSQNNTTNPYVTQKGVEYIAI--------------CDKRDLGGEIALKAY 287 P L + P + + + + Sbjct: 240 APPLRDALKSVPAGQVSPPVMLDGKAVLLVLRTGAASTPAPAAPAPTPAGGPSFEGARDQ 299 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K +K EY+ LRS A+I Sbjct: 300 IQEMLYKQKFDKLFQEYIDNLRSKAVIEI 328 >gi|309379764|emb|CBX21540.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 327 Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 78/286 (27%), Gaps = 17/286 (5%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKIN------GELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + +L+ ++L Q ++ Sbjct: 50 SDGIAAVADNEVITRRRLAQAVADAKANLPKDVQIGDEELTGQVLMQLVNQSLIVQAGKR 109 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 + A + + K V + + Sbjct: 110 R----NIQASEAEIDAAAAQNPQLKHLSAEQRRELADSIIAEKVRQQAVMQNSRVSEAEV 165 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 E + R I + + I+ + Sbjct: 166 DRFI-----EQAQKQGITLPEGEPLRQYRAQHILIKADGENAAVGAESTIRKIYDQARNG 220 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 +++ + G + + + F+ + + P TQ G I Sbjct: 221 TDFSGLARQYSQDAGAGNGGDLGWFSDGVMVAPFEAAVHALKPGQVSAPVRTQFGWHIIK 280 Query: 272 ICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + RD E ++ + K E+ AE ++ L S A I Sbjct: 281 LNEVRDAGTPEERIRNSVRQYIFQQKAEQATAELLRDLHSGAYIDI 326 >gi|146340301|ref|YP_001205349.1| hypothetical protein BRADO3324 [Bradyrhizobium sp. ORS278] gi|146193107|emb|CAL77118.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278] Length = 287 Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 111/284 (39%), Gaps = 3/284 (1%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 A + I +NG+ ITD DI +R L L + + + ELI + +K +E +K G+ Sbjct: 3 SAHAQSIVVMVNGDPITDYDIEQRSKLNFLSTHKQQSRQEVLNELIDDKVKIKEGKKFGV 62 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 S+ ++ F L+AE + L+ QG+ KQ + + +W +V+ + + Sbjct: 63 EPSSSDIDQSFAGMGSRMRLNAEQLTRSLESQGVRPETLKQRIKAEIVWTSLVRGRYKER 122 Query: 156 --YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + ++ + + + + + + E+ Sbjct: 123 LFVSDKDVAAAVAAAGGDTGQQGQSFEYKMQPVVLIVPNSSNQGAMEIRQKEAEALRGRV 182 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAI 272 + C + + + + +D+ P + LL + + T P T++G++ +A+ Sbjct: 183 QSCADANNISRTTANAVVKEIVVKTSADIPPNLRKLLDDTPIGHLTPPEATKQGIQMVAL 242 Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 C + + + Q K E Y++++R A+I Y Sbjct: 243 CARTPTTVDTPKAREIKEQMYAKKYEATSKAYLQEVRKAAMIEY 286 >gi|153007317|ref|YP_001381642.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. Fw109-5] gi|152030890|gb|ABS28658.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. Fw109-5] Length = 317 Score = 124 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 80/280 (28%), Gaps = 17/280 (6%) Query: 43 RTTINGEVI----TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98 +NGE I ++ + A L + + EL+ TL QE I Sbjct: 37 VALVNGEPIGADVLARELREASAGDARGDGGDVLRRRLLDELVDRTLLLQEARARSIVVG 96 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 + V F++ F L +Q + K LA Q + + + Sbjct: 97 QDQVERAFLRVRAE--YPGTHFDDLLAQQRLSQADLKARLADQLTVERLFEEQVYPQVQV 154 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + EI + + + ++ + E+ R Sbjct: 155 SDAEIQRYFADHAAEFEEPEKVHVLQVVV--------ASKEEALAVREKLRRNPQTFAEV 206 Query: 219 LEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 K + G Y+ F N ++ + G + D+R Sbjct: 207 ARKSSIAPEGKGGGDLGYIGRGSGFPEVFDVTFTLPLNRVSDVTPSPYGFHIFKVVDRRA 266 Query: 278 LG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + ++A+ K + + +YVK LR A I Sbjct: 267 AQRRTLEQARGDIAAKLAREKRAQVQQDYVKGLRERARIE 306 >gi|154253778|ref|YP_001414602.1| SurA domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154157728|gb|ABS64945.1| SurA domain [Parvibaculum lavamentivorans DS-1] Length = 443 Score = 124 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 38/282 (13%), Positives = 102/282 (36%), Gaps = 13/282 (4%) Query: 18 TYFVLIIFCIVPI----VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ------- 66 T F+ + V ++ + + + I +N +I+ D+ +R+ L+ L Sbjct: 25 TAFIFLAGLAVTPADMPLAQNAPSNTQGIAAVVNDRIISSYDLDQRVKLVMLSSGIPDTP 84 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 + + ++ L+ E L++QE + I ++ + A+ +S + +FL Sbjct: 85 ENISRIRGQVLRSLVDEYLQQQEAARLNIEVQQEEIDSALQRIAQRANMSVDQIEAFLKD 144 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 G+ + + W V++ F ++EI ++++ + + + + + Sbjct: 145 GGVSRAALEAQIRSDIAWNRVIQQQFGPSVTVGDVEIDEVLRRLEEESDQPRYLVSEILI 204 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 D+ + + E+ R + +F+ + G+ ++ S L Sbjct: 205 TFDSPQHAEEIAGGAQRLVEQIR-QGAPFEAVAHQFSQSASAANGGEIGWVHASQLPEGV 263 Query: 247 -QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 + K ++P T G + + + G ++ Sbjct: 264 GSVVAKMQPGMVSDPIRTLNGFYIMQLKAMQTGSGADPMRDQ 305 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 31/257 (12%), Positives = 75/257 (29%), Gaps = 10/257 (3%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEK---SGITFDSN 100 T+ I ++ +R+ + + + + + LI + E + + Sbjct: 174 VTVGDVEI--DEVLRRLE-----EESDQPRYLVSEILITFDSPQHAEEIAGGAQRLVEQI 226 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 F A SA + + ++ + + +D + Sbjct: 227 RQGAPFEAVAHQFSQSASAANGGEIGWVHASQLPEGVGSVVAKMQPGMVSDPIRTLNGFY 286 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + Q + +P V +R ++AEE R + + Sbjct: 287 IMQLKAMQTGSGADPMRDQYSLMQVLLPLTPDAEPQAVSRRAREAEEFRRQTNSCDDAAR 346 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + + K + Q L NTT P +++G+E + +C + G Sbjct: 347 NITKYLSGAASPKRDVIAGQLDPRLRQALSGLKAGNTTAPIRSERGIEMVVVCGHKAAEG 406 Query: 281 EIALKAYLSAQNTPTKI 297 E + + + ++ Sbjct: 407 ERPTREQIDSSLYEQQL 423 >gi|49475336|ref|YP_033377.1| hypothetical protein BH05420 [Bartonella henselae str. Houston-1] gi|49238142|emb|CAF27350.1| hypothetical protein BH05420 [Bartonella henselae str. Houston-1] Length = 322 Score = 124 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 73/316 (23%), Positives = 128/316 (40%), Gaps = 7/316 (2%) Query: 7 TSLSDFIKLLTTYFVLIIFCI--VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 ++ K + T F ++ I + + S + I T+NG+ IT+ DI +R A L+ Sbjct: 5 NYMNKLKKHILTLFCIVPLSISNLLVSEIPSTFAQTVIVVTVNGKPITNYDIQRRAAFLR 64 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 LQ+ G L + A ELI E LK EI++ I +N V F A ++ + + L Sbjct: 65 LQQKQGNLSEQAKNELINEVLKNIEIKRRNIEVSNNEVESAFKNFAAQNNMTVDQLNQIL 124 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 I HFK Y+ Q W +V + + G + + + T+ Sbjct: 125 IDNDITVQHFKDYIRGQLGWGRLVNARYQAETGMISEQEAVRRILKNGGVKPSTNEYTLQ 184 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 I + + +R + + + C K A I DV++ LE L Sbjct: 185 RIIFVIPAHRRSEIFERRQREANNFRAHFQGCANTSKQAKGILDVTVRNLGKFLEPQLPR 244 Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK----IEK 299 +++ ++ + T T G+E IA+C + + + + S Q+ K +E Sbjct: 245 EWEQAIRITPAGKMTQLQETADGIEAIAVCKIKRVSDDYVARLIFSLQDNKQKSPQELEI 304 Query: 300 HEAEYVKKLRSNAIIH 315 +Y+K+LR A I Sbjct: 305 LSEKYLKELRQVARIK 320 >gi|254362982|ref|ZP_04979046.1| peptidylprolyl isomerase [Mannheimia haemolytica PHL213] gi|153094638|gb|EDN75442.1| peptidylprolyl isomerase [Mannheimia haemolytica PHL213] Length = 314 Score = 124 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 53/316 (16%), Positives = 111/316 (35%), Gaps = 17/316 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +KL+ + F + + + ++ + A R+ +N I + + +L +K Sbjct: 1 MKLVKSLFAVAVATMS--LTQTAHAFEERVVALVNDTPIMQSQVQR---VLGKKKATETA 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ A+ ++I + L +Q ++++G+ VN A G++ LD QGI Sbjct: 56 QRAAIDQVIDDMLVQQAMKEAGVKVSPAAVNQAVENVAIQNGITYGQLLDALDYQGITLE 115 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI----------TVREYLIRT 182 FK+ +A Q V ++ A +++ + +E+ I Sbjct: 116 QFKRNIAQQMAMEQVRHISISKSIQVAPQQVQALAKELMAKDKAAGKLKTVSGKEHRISH 175 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 +L Q + + + ++ + G + Sbjct: 176 ILLKTNPILNDAQAKAKLSSLTTDINSGKISFEEAAKTHSVDYASGADGGDLGFNFLEIY 235 Query: 243 HPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKH 300 P F N+ K N + P+ +Q G + + D R+ Q + E+ Sbjct: 236 DPAFANVASKIKPNQISAPFKSQFGWHILKVTDTRNGDRTEDAYHQRAYQQLVNKQAEEA 295 Query: 301 EAEYVKKLRSNAIIHY 316 ++VK LR A I Y Sbjct: 296 SKDWVKALRKTANIQY 311 >gi|303256196|ref|ZP_07342212.1| peptidyl-prolyl cis-trans isomerase SurA [Burkholderiales bacterium 1_1_47] gi|331001252|ref|ZP_08324878.1| SurA protein [Parasutterella excrementihominis YIT 11859] gi|302860925|gb|EFL84000.1| peptidyl-prolyl cis-trans isomerase SurA [Burkholderiales bacterium 1_1_47] gi|329568979|gb|EGG50775.1| SurA protein [Parasutterella excrementihominis YIT 11859] Length = 453 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 94/292 (32%), Gaps = 16/292 (5%) Query: 36 WAMSSRIRTTINGEVITDGDISKRI--------ALLKLQKINGELEKIAVQELIVETLKK 87 RI +N +VIT+ + +RI L + +I+E + + Sbjct: 44 PVPVDRIAAVVNHDVITEIQLQQRIHQVATNLRRRNIPLPPMDNLRDQTLDRMILERIIE 103 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 Q+ +GI D N +N Q A N GL+ L GI FK + + + + Sbjct: 104 QKARDTGIRIDDNMLNGAIEQIATNNGLTVPQLEKKLAADGISVPSFKSEIRSELLTQRL 163 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLI--RTVLFSIPDNKLQNQGFVQKRIKDA 205 + D K E EI + R R V+ + Q+ A Sbjct: 164 RERDVDDKIQIPESEIDQYLKDQSGPGKRMEYRLSRIVISFPENPTKAEVEAAQRTASRA 223 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 E R K++ + G ++ L P L+ + P Sbjct: 224 LEQAQRGADFSQLAAKYSVTPEAMEGGVMGWVPAGKLPPFVVQALQNHKAGDIIPLQAGN 283 Query: 266 GVEYIAICDKRDLGGE------IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + + RD G + ++ + + EK + + +++S Sbjct: 284 SFQILKLTGVRDPGEQAQQGVRQTHVRHIMMRPSNVTPEKVVIQRLNEIKSR 335 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 30/281 (10%), Positives = 84/281 (29%), Gaps = 14/281 (4%) Query: 46 INGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 ++ ++ I + +I + LK Q G+ + + +++ + + + + Sbjct: 168 VDDKIQIPESEIDQ---YLKDQSGPGKRMEYRLSRIVISFPENPTKAEVEAAQRTASRAL 224 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY-------G 157 Q + A +S + G + + ++N Sbjct: 225 EQAQRGADFSQLAAKYSVTPEAMEGGVMGWVPAGKLPPFVVQALQNHKAGDIIPLQAGNS 284 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDC 216 +++ + + + + + + V +R+ + + + Sbjct: 285 FQILKLTGVRDPGEQAQQGVRQTHVRHIMMRPSNVTPEKVVIQRLNEIKSRLDKGDGDFQ 344 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK 275 ++ G +L D+ P+ + K S + P T G + D+ Sbjct: 345 TLARLHSADPSGTRGGDLGWLYPGDVPPEMEQQLDKLSVGEISEPIRTPYGWHIFQVLDR 404 Query: 276 R-DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 R G + K+ ++ ++LRS A + Sbjct: 405 RTKSGINERQREQAREALREQKLGDAVLDWERRLRSEAYVE 445 >gi|224827238|ref|ZP_03700332.1| SurA domain protein [Lutiella nitroferrum 2002] gi|224600527|gb|EEG06716.1| SurA domain protein [Lutiella nitroferrum 2002] Length = 428 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 105/301 (34%), Gaps = 16/301 (5%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--------NGELEKIAVQEL 80 RI +N IT+ D+ KRI ++ L + ++++ Sbjct: 17 GTAYAAPVRAVDRIVAVVNKSAITESDLQKRIKETVMELEARKVTPPAPDVLARQVLEQM 76 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I E ++ Q +G+ + + + A L+ E + L K+G+ ++F++ + Sbjct: 77 ITEEVQVQYATSNGVRVSDDELQQTLERLASQNKLTLEAMKAQLAKEGVTFDNFREQIRR 136 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ- 199 Q + + + + + + E+ + + EY + +L S+P+ Q Q Sbjct: 137 QILLSRLKEREVESRVNVSDTEVEQVLKSEQTANRSEYRLANILVSVPERADAKQIDAQS 196 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT 258 ++ A ++ + + G + S L F + L + T Sbjct: 197 QKAHKALAELDAGQPFAKVAAAYSDAPNGLKGGDLGWRPASSLPLDFTKLLETMQPGSHT 256 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALK----AYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +Q+G + +KR + ++ ++ + E + ++R I Sbjct: 257 TVIRSQQGFFIFQLQEKRSADTPLIVEQYHVRHILLRTNEAVSEADAKTRLLQIRDR--I 314 Query: 315 H 315 Sbjct: 315 E 315 Score = 93.2 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 34/280 (12%), Positives = 86/280 (30%), Gaps = 19/280 (6%) Query: 45 TINGEVITDGDISKRIALLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGIT 96 +N ++D ++ + + + + + + A + I +K + + Sbjct: 151 RVN---VSDTEVEQVLKSEQTANRSEYRLANILVSVPERADAKQIDAQSQKAHKALAELD 207 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 GL D D V+++ Sbjct: 208 AGQPFAKVAAAYSDAPNGLKGGDLGWRPASSLPLDFTKLLETMQPGSHTTVIRSQQGFFI 267 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 ++ + + V +Y +R +L N+ ++ + R+ + R Sbjct: 268 ----FQLQEKRSADTPLIVEQYHVRHILL--RTNEAVSEADAKTRLLQIRDRIERGASFE 321 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK 275 + ++ + G ++ D P F+ + N + P + G I + K Sbjct: 322 EMAKLYSEDASNTRGGDLGWVNLGDTVPTFEQAMTSLPLNTVSQPVRSPFGWHLIKVEGK 381 Query: 276 RDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKKLRSNAII 314 R + + Q KI++ ++V++LR +A + Sbjct: 382 RTQDVAQDREKMMVKQQIRARKIDEAYLDWVRQLRDSAFV 421 >gi|74318356|ref|YP_316096.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiobacillus denitrificans ATCC 25259] gi|121956487|sp|Q3SGF9|SURA_THIDA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|74057851|gb|AAZ98291.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiobacillus denitrificans ATCC 25259] Length = 436 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 42/290 (14%), Positives = 90/290 (31%), Gaps = 17/290 (5%) Query: 40 SRIRTTINGEVITDGDISKR----IALLKLQK----INGELEKIAVQELIVETLKKQEIE 91 + I +N EVIT +++KR + L Q LEK ++ ++ E +Q Sbjct: 36 NHIVAVVNDEVITRQELAKRYDEVVRNLSRQNTPLPPRNVLEKQLLERMVTELALQQHAR 95 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 +G+ D V + A L + L+K+G + + + + + + D Sbjct: 96 NTGVRADPTLVERALQRIAAQNKLDMAGLQAALEKEGQTLDGMRNTIRNELLIARARERD 155 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + EI Q + + + +++R AE+ + Sbjct: 156 VDNRISVSDAEIDGYLQTQAQQGAETEYNFSHILVSVPE-NASPEQIRERRARAEDILAQ 214 Query: 212 LPKDCNKL---EKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGV 267 L + + + G + L F + L + + G Sbjct: 215 LAAGADFAQLSASHSDAPDALKGGNFGWRASGKLPALFVEALKPMQPGEISPLLRSGNGF 274 Query: 268 EYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + DKR L ++ + E + +L+ Sbjct: 275 HILKLVDKRGLDATLSVTQTHARHILIKTNEITSEADARNRLLQLKERID 324 Score = 99.0 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 45/139 (32%), Gaps = 2/139 (1%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 I N++ ++ + R+ +E K + G ++ Sbjct: 293 QTHARHILIKTNEITSEADARNRLLQLKERIDNGVKFDELARLHSEDASASKGGDLGWIN 352 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQNTPTK 296 D P F+ + + P + G I + ++RD + + K Sbjct: 353 PGDTVPDFEKAMNALQPGEVSAPVQSPFGWHLIQVLERRDQDVTQERQKLMARQAIRERK 412 Query: 297 IEKHEAEYVKKLRSNAIIH 315 E+ ++V+++R A + Sbjct: 413 AEEAFQDWVRQIRDAAYVE 431 >gi|83720338|ref|YP_441133.1| survival protein SurA [Burkholderia thailandensis E264] gi|257140205|ref|ZP_05588467.1| survival protein SurA, putative [Burkholderia thailandensis E264] gi|122070640|sp|Q2T116|SURA_BURTA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|83654163|gb|ABC38226.1| survival protein SurA, putative [Burkholderia thailandensis E264] Length = 448 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 107/336 (31%), Gaps = 31/336 (9%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAM-------SSRIRTTINGEVITDGDISKRIA 61 + ++ L+ I S + A+ + + +N +VIT ++ +R+ Sbjct: 1 MKKTLRFAAVAAGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVG 60 Query: 62 LLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 L+ + +L + ++++E ++ Q + GI D+ TV + A+ Sbjct: 61 LIARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQAN 120 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 G+ + + + ++ QG+ + F + + + + + + K + E+ + + Sbjct: 121 GMPLDQYKARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGP 180 Query: 174 TVREYLIRTVLFSIPDNKLQNQ-----GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + +K +++ + + Sbjct: 181 NAGAQQDLRLEHIFVKAPTNAPQADIDAAQKKAEGLLQQALASGTNFERLAKSQSEADDA 240 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKR----DLGGEI 282 G + S L + + K + NP G E + + D+R Sbjct: 241 KKGGDLGFKAPSSLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVDRRASQNPAASPK 300 Query: 283 ALKAYLSAQNT---PTKIEKHEAEYVKKLRSNAIIH 315 ++ ++ K E + + +R I Sbjct: 301 IVQTHVRHILLRVGEGKSESQARQQLIDIRRQ--IE 334 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 16/156 (10%), Positives = 54/156 (34%), Gaps = 2/156 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + + + + +++ ++++ D + Sbjct: 287 VDRRASQNPAASPKIVQTHVRHILLRVGEGKSESQARQQLIDIRRQIEAGGDFEKFARTY 346 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G ++ + P+F+ + +NP T+ G I + +RD G Sbjct: 347 SQDGSASQGGDLGWISPGETVPEFERAMNALQDGQVSNPVRTEYGYHLIQVLGRRDAEGS 406 Query: 282 IALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + K E+ ++++++LR ++ + Sbjct: 407 VQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQI 442 >gi|167835488|ref|ZP_02462371.1| survival protein SurA, putative [Burkholderia thailandensis MSMB43] Length = 448 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 37/336 (11%), Positives = 106/336 (31%), Gaps = 35/336 (10%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS-----------SRIRTTINGEVITDGDISKRIA 61 +K + + + +++ A + + +N +VIT ++ +R+ Sbjct: 1 MKKTLRFAAVASGLVASLITVAPPASAQALRAQGASLADEVVAVVNNDVITGRELDQRVG 60 Query: 62 LLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 L+ + +L + ++++E ++ Q + GI D+ TV + A+ Sbjct: 61 LIARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQAN 120 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 G+ + + + ++ QG+ + F + + + + + + K + E+ + + Sbjct: 121 GMPLDQYKARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGP 180 Query: 174 TVREYLIRTVLFSIPDNKLQNQ-----GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + +K +++ + + Sbjct: 181 NAGSQQDLRLEHIFVKAPTNAPQADIDAAQKKADGLLQQALASGANFERLAKSQSEADDA 240 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKR----DLGGEI 282 G + S L + + K + NP G E + + ++R Sbjct: 241 KKGGDLGFKSPSSLPSDVVDAVSKLRPGEVNPALIRVPDGFEIVRLVERRASQNPAASPK 300 Query: 283 ALKAYLSAQNT---PTKIEKHEAEYVKKLRSNAIIH 315 ++ ++ K E + + +R I Sbjct: 301 IVQTHVRHILLRVGEGKSESQARQQLIDIRRQ--IE 334 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 16/156 (10%), Positives = 54/156 (34%), Gaps = 2/156 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + + + + +++ ++++ D + Sbjct: 287 VERRASQNPAASPKIVQTHVRHILLRVGEGKSESQARQQLIDIRRQIEAGGDFEKFARTY 346 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G ++ + P+F+ + +NP T+ G I + +RD G Sbjct: 347 SQDGSASQGGDLGWISPGETVPEFERAMNTLQDGQVSNPVRTEYGYHLIQVLGRRDAEGS 406 Query: 282 IALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + K E+ ++++++LR ++ + Sbjct: 407 VQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQI 442 >gi|288958015|ref|YP_003448356.1| peptidyl-prolyl cis-trans isomerase [Azospirillum sp. B510] gi|288910323|dbj|BAI71812.1| peptidyl-prolyl cis-trans isomerase [Azospirillum sp. B510] Length = 485 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 104/308 (33%), Gaps = 34/308 (11%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETLKKQEIE 91 S I +N EV++ D++ RI + L L ++ LI E L+ QE + Sbjct: 53 SEGIAAVVNDEVVSVSDVNARIRMALLNAGGAANPETIQRLTPQVMRLLIDERLQMQEAK 112 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 + G+T ++ ++ + A ++ + L +Q + + K + W V++ Sbjct: 113 RQGVTVSASEIDDAIKRIAEQNRMNNQQLQEMLKRQNVPVSTLKDQIRALLAWQKVMQRR 172 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + E E+ A +++K + + +F D+ Q+ + + EE + R Sbjct: 173 IRQEVVVGEDEVDAAMERLKANIGKPEYLVAEIFLAVDSPDQDDEVRRNAERLVEEVK-R 231 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYI 270 +F+ S G ++ +L P+ + L + P T G + Sbjct: 232 GGNFAALARQFSQSAGAASGGDLGWVRSGELSPEVDKALSGMRGGQLSAPVRTATGYHIL 291 Query: 271 AICDKRDLGGE-------------------------IALKAYLSAQNTPTKIEKHEAEYV 305 + +R G + + K E Sbjct: 292 LVRGQRPFGSSGGEVPMPAAQPAAPRPQPRPDLAKATVNMKQIILPIESKEQAKEVKEQA 351 Query: 306 KKLRSNAI 313 +KLR + Sbjct: 352 EKLRKSIK 359 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 41/144 (28%), Gaps = 22/144 (15%) Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 K +K+ E + K C + A + G + D+ P QNL Sbjct: 339 ESKEQAKEVKEQAEKLRKSIKSCGDFQARAKETGMPESGDMGTMRVKDMAPGLQNLALGI 398 Query: 254 Q-NNTTNPYVTQKGVEYIAICDK---------------------RDLGGEIALKAYLSAQ 291 + ++ + +C + ++ + + + Sbjct: 399 PLGQASPVLMSPAAAVILIVCKRDVPMIQPPPEAQPAPPPPAPTPIQEAKLPGRDEIERE 458 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIH 315 + E Y++ LR +A + Sbjct: 459 LVNERSELLSRRYLRDLRRSAFVE 482 >gi|307946740|ref|ZP_07662075.1| SurA N- domain family [Roseibium sp. TrichSKD4] gi|307770404|gb|EFO29630.1| SurA N- domain family [Roseibium sp. TrichSKD4] Length = 291 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 119/290 (41%), Gaps = 3/290 (1%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKK 87 + + S+ I+ +NG+ IT DI++R L++L + + + A +ELI + L+ Sbjct: 1 MGGFGLTPASAGIKVVVNGKPITTYDINQRAKLIRLIQRSSVAASRREAEKELIDDRLRL 60 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 +E + G+ VN + ARN L+ ++ L + G+ K L Q + Sbjct: 61 EEASRIGVKISEAEVNNAYANIARNVKLTPAKLTAGLRQSGVNPQTLKDRLKAQLAFQQS 120 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 V+ F + E +I +K + + + I ++ + + Sbjct: 121 VRRRFNSQVDVDESDIINALRKSDDENKNISVEYNLQRVIVVVPKKSSKGFRNKRLAESN 180 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKG 266 S + C+ K +V + LE++L + + K + T+P T+ G Sbjct: 181 SIRKAVTACDSAGAVFGKYSEVVVQPIGRRLETELPEPMRKEISKTTPGKLTSPRKTEVG 240 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 E IA+C KR++ +IA + L + + E Y+ LR A I Y Sbjct: 241 FEMIAVCGKREIASDIAARTELENELRAKEGEALTRRYLMDLRRRASIVY 290 >gi|167579883|ref|ZP_02372757.1| survival protein SurA, putative [Burkholderia thailandensis TXDOH] Length = 448 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 107/336 (31%), Gaps = 31/336 (9%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAM-------SSRIRTTINGEVITDGDISKRIA 61 + ++ L+ I S + A+ + + +N +VIT ++ +R+ Sbjct: 1 MKKTLRFAAVAAGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVG 60 Query: 62 LLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 L+ + +L + ++++E ++ Q + GI D+ TV + A+ Sbjct: 61 LIARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQAN 120 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 G+ + + + ++ QG+ + F + + + + + + K + E+ + + Sbjct: 121 GMPLDQYKARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGP 180 Query: 174 TVREYLIRTVLFSIPDNKLQNQ-----GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + +K +++ + + Sbjct: 181 NAGAQQDLRLEHIFVKAPTNAPQTDIDAAQKKAEGLLQQALASGTNFERLAKSQSEADDA 240 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKR----DLGGEI 282 G + S L + + K + NP G E + + D+R Sbjct: 241 KKGGDLGFKAPSSLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVDRRASQNPAASPK 300 Query: 283 ALKAYLSAQNT---PTKIEKHEAEYVKKLRSNAIIH 315 ++ ++ K E + + +R I Sbjct: 301 IVQTHVRHILLRVGEGKSESQARQQLIDIRRQ--IE 334 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 16/156 (10%), Positives = 55/156 (35%), Gaps = 2/156 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + + + + +++ ++++ D + Sbjct: 287 VDRRASQNPAASPKIVQTHVRHILLRVGEGKSESQARQQLIDIRRQIEAGGDFEKFARTY 346 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G ++ + P+F+ + + +NP T+ G I + +RD G Sbjct: 347 SQDGSASQGGDLGWISPGETVPEFERAMNALQEGQVSNPVRTEYGYHLIQVLGRRDAEGS 406 Query: 282 IALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + K E+ ++++++LR ++ + Sbjct: 407 VQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQI 442 >gi|325526673|gb|EGD04205.1| SurA domain-containing protein [Burkholderia sp. TJI49] Length = 452 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 102/304 (33%), Gaps = 24/304 (7%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVETL 85 + ++ + +N +VIT ++ +R+ L+ + L + ++++E + Sbjct: 34 QGAQLADEVVAVVNNDVITGRELDQRVGLIARRLQQQNAPVPPTDQLRAQVLNQMVLERI 93 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + Q+ + GI D TV + A+ G++ + + + L+ QG+ + F + + Sbjct: 94 QVQKAKDDGIRIDDATVQATLQRLAQANGMTLDQYRARLESQGVPWSIFTADARTELMLS 153 Query: 146 DVVKNDFMLKYGNLEMEIPAN----KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + + + K + E+ + + + + + QK+ Sbjct: 154 KLREREVDGKITVSDAEVANYIASQRGPNASQQQDLRFQHIFIKAPTNAPQTEIEAAQKK 213 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP- 260 + + + + G + S L + + K + NP Sbjct: 214 AEALLQQATSGADFEKLAKNNSEASDAKKGGDLGFKSPSALPAEVVDAASKLRPGQVNPT 273 Query: 261 -YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLRSN 311 G E + + D+R G A ++ + K E + + +R+ Sbjct: 274 LIRVPDGFEIVRLVDRRQSQGATAAAPKIVQTHVRHILLRVGEGKSEGQARQQLLDIRNQ 333 Query: 312 AIIH 315 I Sbjct: 334 --IE 335 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 33/288 (11%), Positives = 95/288 (32%), Gaps = 21/288 (7%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQ-ELIV--------ETLKKQEIEKSGIT 96 ++G+ IT D ++ + Q+ ++ ++ + I +T + +K+ Sbjct: 160 VDGK-ITVSD-AEVANYIASQRGPNASQQQDLRFQHIFIKAPTNAPQTEIEAAQKKAEAL 217 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD------NHFKQYLAIQSIWPDVVKN 150 T F + A+N +++ L + P +++ Sbjct: 218 LQQATSGADFEKLAKNNSEASDAKKGGDLGFKSPSALPAEVVDAASKLRPGQVNPTLIR- 276 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + + Q + + + +++G ++++ D Sbjct: 277 -VPDGFEIVRLVDRRQSQGATAAAPKIVQTHVRHILLRVGEGKSEGQARQQLLDIRNQIE 335 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269 ++ G ++ + P+F+ + + P T+ G Sbjct: 336 AGGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQDGQISQPVRTEYGYHL 395 Query: 270 IAICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + +RD G + + + K E+ A+++++LR ++ + Y Sbjct: 396 IQVIGRRDAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSYVQY 443 >gi|238782669|ref|ZP_04626699.1| Chaperone surA [Yersinia bercovieri ATCC 43970] gi|238716329|gb|EEQ08311.1| Chaperone surA [Yersinia bercovieri ATCC 43970] Length = 434 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 107/296 (36%), Gaps = 16/296 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72 +++ + ++ + ++ ++ V+ D+ + +KL L Sbjct: 7 LILGLVVCANTAFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQAGQQVPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI+++++ Q +K GIT ++ A ++ S L G+ + Sbjct: 67 RHQILERLIMDSIQLQMAKKMGITVSDEALDKAIADIAAQNRMTPAQMRSRLAADGLNYD 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +++ + + + +V N+ + L E+ + +++ N T + + IP + Sbjct: 127 TYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQIGNQTSGDAELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 +Q V + + A + + + ++ + G+ + +L F + Sbjct: 187 PSQQQVDQAEELANKLVSDIKGGADFGKLAIANSADSQALKGGQMGWGKLQELPSLFAEK 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKH 300 L ++ + P + G + + D R + ++ + +P + Sbjct: 247 LQSANKGDVVGPIRSGVGFHILKVNDIRGADKTVSVTEVHARHILLKPSPVMTDDQ 302 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 55/168 (32%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + K ++V E R +L +Q + A+ + Sbjct: 259 IRSGVGFHILKVNDIRGADKTVSVTEVHARHILLKPSPVMTDDQARAKLAAAAADIKSGK 318 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269 N ++ + V G + P F++ +K + + P + G Sbjct: 319 -TTFANIAKEISQDPGSAVQGGDLGWASPDIYDPAFRDALMKLQKGEISAPVHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R+ A + Sbjct: 378 IQVVDTRQVDKTDAAQKDRAYRMLFSRKFAEEAQTWMQEQRAAAYVKI 425 >gi|307825062|ref|ZP_07655283.1| SurA domain protein [Methylobacter tundripaludum SV96] gi|307733810|gb|EFO04666.1| SurA domain protein [Methylobacter tundripaludum SV96] Length = 434 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 107/313 (34%), Gaps = 15/313 (4%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71 + T V ++ ++ + I + +VI + ++ K +A+++ + Sbjct: 6 NIKRTIVVALLCNLLFGSFLVHAEVLDTIIAVVEEDVILERELQKEVAVIEQRIQQSNAA 65 Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 L K ++++IV+ L++Q EK+GIT +N AR + E F + L+ Sbjct: 66 IPPAYVLRKQVLEKMIVDKLQRQLAEKAGITVSEEMLNSSAADIARRNNMDIEQFRAELE 125 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 QGI F + + I + + + + E+ + I Sbjct: 126 GQGISYQSFLDNMRNEIIINQLRGREIGGRIKVTDREVEHYMETQDKIGEESTQYHLGHI 185 Query: 186 SIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 I + + +QK + AE + + + G + S++ Sbjct: 186 LIAVKEGASSTEIQKAMSKAEGIVGSLRGGQDFSQTAISDSDDANALKGGDLGWRTLSEV 245 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI---E 298 F + + Q + + P + G + + + + + K + T + Sbjct: 246 PTLFVNEIRQMKQGDVSEPIRSPSGFHIVKMLELKGTDNHMITKTKVRHILIKTNELVDD 305 Query: 299 KHEAEYVKKLRSN 311 + + L++ Sbjct: 306 AEANKRLLALKAR 318 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 3/140 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLE 239 + I N+L + KR+ + + + G ++ Sbjct: 291 KVRHILIKTNELVDDAEANKRLLALKARIADGDDFAALARAHSDDKGSALKGGSLDWVGP 350 Query: 240 SDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKI 297 DL F+ + K N ++P TQ G I + + + K + KI Sbjct: 351 GDLVKPFEEAMVKLGINEVSDPVQTQFGWHIIQVLGRENKDDSSEFKKNLVREAIRKRKI 410 Query: 298 EKHEAEYVKKLRSNAIIHYY 317 E+ +V++LR A + Y Sbjct: 411 EEETELWVRRLRDEAFVEIY 430 >gi|292492134|ref|YP_003527573.1| SurA domain protein [Nitrosococcus halophilus Nc4] gi|291580729|gb|ADE15186.1| SurA domain protein [Nitrosococcus halophilus Nc4] Length = 425 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 106/312 (33%), Gaps = 16/312 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK-------- 67 + V ++ + S+ + + RI +N EV+ + ++ + + ++ Q Sbjct: 1 MRRLLVAVLAVFWSMGSFGAT-ILDRIVAVVNEEVVLESELEQMVHTVQEQLVAKGTPLP 59 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 + LE+ ++ L+++ L+ Q ++GI T+N + A + GL+ F L++ Sbjct: 60 PDYMLEQQVLERLVMQQLQLQLAARTGIRVGDETLNQALRRIAEDNGLTLSQFRDVLEQD 119 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 G F++ + + I + K + + E EI + ++ + I Sbjct: 120 GYNFPSFRENIRRELIISQLHKREVNDRVTVSEAEIDNFLTTQRKRGNQDVQYQLGHVLI 179 Query: 188 PDNKLQNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + +Q E+ + ++ + G + L Sbjct: 180 AVPEAASPEQLQAARAKGEQLLRQLREGMDFQKAALAYSDGQQALEGGNLGWRKMGQLPT 239 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + K + + G + + D+R ++ + + Sbjct: 240 LFVDVVPKLQVGEISELIRSPSGFHIVKLLDRRGEEQQVVTQTHARHILLRTDELTSNRD 299 Query: 301 EAEYVKKLRSNA 312 + +LR A Sbjct: 300 ARLRLGQLRQRA 311 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 35/283 (12%), Positives = 89/283 (31%), Gaps = 17/283 (6%) Query: 46 INGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 +N V +++ +I L Q+ G + +L + E + Sbjct: 144 VNDRVTVSEAEIDN---FLTTQRKRGN--QDVQYQLGHVLIAVPEAASPEQLQAARAKGE 198 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 ++ R + ++ D Q + + + + V L+ G + I Sbjct: 199 QLLRQLREGMDFQKAALAYSDGQQALEGGNLGWRKMGQLPTLFVDVVPKLQVGEISELIR 258 Query: 165 ANKQKMKNI--------TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + + ++L + + R+ + L+ Sbjct: 259 SPSGFHIVKLLDRRGEEQQVVTQTHARHILLRTDELTSNRDARLRLGQLRQRALQGDDFS 318 Query: 217 NKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICD 274 + + + G ++ + P+F+ +++ + P+ TQ G + I + Sbjct: 319 ELAQAHSDDKASALKGGDLGWISPGQMIPRFEEVMRSLDPGEISKPFQTQFGWHVVQILN 378 Query: 275 KRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R E + + KIE+ ++++LR A + Y Sbjct: 379 RRQQNMTEEFNRNRARMEIRQRKIEEELENWLRQLRDEAYVEY 421 >gi|251788205|ref|YP_003002926.1| peptidyl-prolyl cis-trans isomerase SurA [Dickeya zeae Ech1591] gi|247536826|gb|ACT05447.1| Peptidylprolyl isomerase [Dickeya zeae Ech1591] Length = 430 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 103/303 (33%), Gaps = 16/303 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ + +++ + ++I ++ V+ + DI+ + +KL L Sbjct: 7 LVLGLALSANMAFAAPQEVNKIAAVVDNSVVLESDINSLLQSVKLNAQEAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A +S + S L +G+ + Sbjct: 67 RHQILERLIMDNIILQMAQKMGVQVTDEQLDRSIANIAAQNRMSIDQLRSRLTAEGVSFD 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + I DV ++ + L E+ + Q++ + + +P + Sbjct: 127 TYRGQIRKDMIIADVRNSEVRRRVTVLPQEVDSLAQQLASQGANGPEVNLSQILLPLPEN 186 Query: 193 QNQGFVQKRIKDAE---ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 Q V K A + + +++ + G+ + +L F + Sbjct: 187 PTQDQVDKAESLANRLVKEASQGADFGKLAITYSADPQALKGGQMGWGRPQELPTLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRD----LGGEIALKAYLSAQNTPTKIEKHEAEY 304 L + P + G + + D R + ++ + + Sbjct: 247 LTNPQKGQIVGPIRSGVGFHILRVNDTRGGAQAVSVTEVHARHILLTTSVVMNDAQARAK 306 Query: 305 VKK 307 +++ Sbjct: 307 LEE 309 Score = 85.5 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 86/309 (27%), Gaps = 26/309 (8%) Query: 28 VPIVSYKSWAMSSRIRTTI-NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELI 81 V +Y+ I + N EV + ++ L Q NG L Sbjct: 123 VSFDTYRGQIRKDMIIADVRNSEVRRRVTVLPQEVDSLAQQLASQGANGPEVN-----LS 177 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 L E + ++ V+ A + ++ + Q Sbjct: 178 QILLPLPENPTQDQVDKAESLANRLVKEASQGADFGKLAITYSADPQALKGGQMGWGRPQ 237 Query: 142 SIWPDVVKND-----------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + + G + + + + ++V E R +L + Sbjct: 238 ELPTLFAERLTNPQKGQIVGPIRSGVGFHILRVNDTRGGAQAVSVTEVHARHILLTTSVV 297 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL 249 Q K + A + + N ++ + G + P F++ Sbjct: 298 MNDAQA-RAKLEEVAGQIKSGKLSFANAAKQLSQDPGTANQGGDLGWASPEMYDPAFRDA 356 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + + P + G I + D R++ + A K K + ++++ Sbjct: 357 LTQLKKGEISTPVHSSFGWHLIQLLDTREVDKTDAAQKERAYRMLFNRKFAEEAQTWMQE 416 Query: 308 LRSNAIIHY 316 R+ A + Sbjct: 417 KRAAAYVKI 425 >gi|161618653|ref|YP_001592540.1| chaperone surA precursor [Brucella canis ATCC 23365] gi|260566737|ref|ZP_05837207.1| SurA domain-containing protein [Brucella suis bv. 4 str. 40] gi|161335464|gb|ABX61769.1| Chaperone surA precursor [Brucella canis ATCC 23365] gi|260156255|gb|EEW91335.1| SurA domain-containing protein [Brucella suis bv. 4 str. 40] Length = 318 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 67/317 (21%), Positives = 130/317 (41%), Gaps = 9/317 (2%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + + +L L V ++ + ++ ++G IT+ DI R+A LK Sbjct: 1 MMFARPLIASMLGAAVCLTALGTVTAPAFAAGESEVKVI--VSGNAITNSDIKHRMAFLK 58 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 LQ+ +G L ++A EL E LK+ E++ GI V+ + A ++ + + Sbjct: 59 LQRKSGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVM 118 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ G+ HFK+Y+ +Q W +V F E E K Sbjct: 119 NQSGVTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQ 178 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + + + + ++C+ + A I DV++ ++E L Sbjct: 179 VIFVVPASKRSPALLAKRRQEANALRARFQNCDSTRQQAKGILDVTVRDLGRIIEPQLPG 238 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ------NTPTKI 297 ++ +++ N TT P+ T+KGVE++A+C R + + + S + K Sbjct: 239 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKA 298 Query: 298 EKHEAEYVKKLRSNAII 314 E+ +YV++LR A I Sbjct: 299 EELSKKYVQELREKATI 315 >gi|160872391|ref|ZP_02062523.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Rickettsiella grylli] gi|159121190|gb|EDP46528.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Rickettsiella grylli] Length = 431 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 116/317 (36%), Gaps = 18/317 (5%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 ++K + ++ VL + P + Y + RI +N IT + ++ + + Q ++ Sbjct: 3 YLKKIFSFIVLWTSLVTPSLLY-AIETLDRIEAVVNHHAITAQQLDNQMEVKRQQWLSEN 61 Query: 72 --------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 K + E+I + L+ Q G+ + +T++ + A++ GL+ E Sbjct: 62 KSIPNTTTFRKQVLNEMIDQELQLQLAATIGLKINDDTLDKTILSIAQHNGLTLEQLREK 121 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIR 181 L + + +++ + Q + + +N+ K + EI + I ++ Y + Sbjct: 122 LQQANMPFARYREQIRHQLLINRLQQNEVAAKITVTDQEIKDMLTHLPKIISKKAVYHVE 181 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLES 240 +L +N K + + + + L + A+ S G + + Sbjct: 182 DLLIPFSNNPSSTDIARTKETALSLLQKAKQGTSFSALIEHANASTIPLSGGDLGWRPLN 241 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR-----DLGGEIALKAYLSAQNTP 294 DL FQ ++ P G I + + R ++ + +P Sbjct: 242 DLPDIFQTSVQTLKPGEVAGPIRADNGFHLIRLLELRGIAPAPHDVISTHARHILIKTSP 301 Query: 295 TKIEKHEAEYVKKLRSN 311 + ++++R++ Sbjct: 302 LLNNQQAENRLREIRAD 318 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 49/140 (35%), Gaps = 4/140 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 I + L N + R+++ L + +K++ G + L Sbjct: 291 HARHILIKTSPLLNNQQAENRLREIRADILHGGDFASLAKKYSQDPGSSYKGGDLGWTLP 350 Query: 240 SDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTK 296 P F+ K + N + P+ TQ G + + K+ + L + K Sbjct: 351 GFFDPTFEEHLKKLAVNQISLPFQTQYGWHIVQVLGRAKKLQTAQNTLHKQAAQLVYQKK 410 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 +K ++++LR+ + + Sbjct: 411 FQKALKNWLRQLRNQSYVKI 430 >gi|284008562|emb|CBA75119.1| chaperone SurA protein (peptidyl-prolyl cis-trans isomerase) [Arsenophonus nasoniae] Length = 433 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 32/310 (10%), Positives = 99/310 (31%), Gaps = 16/310 (5%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GE 71 ++ + V + + ++ +N V+ D+ + ++++ N Sbjct: 7 LIIGLLFTVSTTTLAAPQQLDKVTAIVNDGVVLQSDVDGMLDIVRINARNAGQQIPDENA 66 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L ++ LI++ + Q EK I ++ A GL+ L GI Sbjct: 67 LRHQILERLIIDKIIMQIAEKMQIQIPDQAIDATIANIAAQNGLTIGQLQQRLSMDGINL 126 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 +++ + + + +V N+ + L E+ + ++ + ++ + IP + Sbjct: 127 QNYRSDVRREMMIAEVRNNEVRRRITILPQEVDSLAAQLNSQAGQDANVNLSHILIPLPE 186 Query: 192 LQNQGFVQKRI---KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 Q + + +++ + + G+ + +L F Sbjct: 187 NPTNTQSQLAMDTVNKIIAQLKQGADFGKLAITYSADPNALKGGQMGWSKVEELPTVFAQ 246 Query: 249 L-LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAE 303 + + P + G + + D + + ++ + +P + Sbjct: 247 QIQHAKKGDIIGPIRSSVGFHILKLNDIQRGNMPISVTEVKARHILIKLSPIMNNEQAHA 306 Query: 304 YVKKLRSNAI 313 ++++ Sbjct: 307 KIQQIAQQIK 316 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 92/290 (31%), Gaps = 18/290 (6%) Query: 43 RTTI-NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 + N EV I ++ A L Q ++ LI + Sbjct: 139 IAEVRNNEVRRRITILPQEVDSLAAQLNSQAGQDANVNLS-HILIPLPENPTNTQSQLAM 197 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND----- 151 N + Q A L+ + +G K + Sbjct: 198 DTVNKIIAQLKQGADFGKLAITYSADPNALKGGQMGWSKVEELPTVFAQQIQHAKKGDII 257 Query: 152 --FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 G +++ ++ I+V E R +L + Q K + A++ + Sbjct: 258 GPIRSSVGFHILKLNDIQRGNMPISVTEVKARHILIKLSPIMNNEQAH-AKIQQIAQQIK 316 Query: 210 LRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGV 267 +K++ + G+ + + + P F++ ++ S+ T+ P + G Sbjct: 317 TGQITFAEAAKKYSQDPGSALRGGELGWNMPNIYDPAFRDGLMRLSKGETSQPIHSSFGW 376 Query: 268 EYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + ++A K + K + ++++LR++A + Sbjct: 377 HLIQLEDTRQVDKTDVAQKDHAYRLLFNRKFNEEAQIWMQELRASAYVKI 426 >gi|145300233|ref|YP_001143074.1| chaperone surA [Aeromonas salmonicida subsp. salmonicida A449] gi|142853005|gb|ABO91326.1| chaperone surA [Aeromonas salmonicida subsp. salmonicida A449] Length = 432 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 28/310 (9%), Positives = 100/310 (32%), Gaps = 15/310 (4%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--- 70 K L + +F + ++ + + ++ +N +V+ + +K Sbjct: 3 KTLISLLTAGLFGAMSQGAFAAPELMDKVLAVVNKDVVLASQQEALVQKVKSSAQESGQS 62 Query: 71 -----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 L K A+ LI E+L+ Q ++ G+ + A + ++ + + L Sbjct: 63 LPDDATLRKQALDRLIQESLQLQLADRQGLKISDTQLEQAIQSIAADNKMTLDQLRAQLA 122 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 ++G+ +++ + + + +V +N + + E+ + ++ Sbjct: 123 REGLTYAQYREEVRREILMNEVRRNQVRRRINISDQEVKQVVDILAKQGQQQQQYHVGHI 182 Query: 186 SIPDNKLQNQGFVQKRIKDAE---ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 I + + E + + ++ + G ++ ++ Sbjct: 183 QIALPDNPSAEQLNAAKSKIERILAALKQGADFRKLAIAESNGPKALEGGDWSWMSPQEM 242 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIE 298 + + ++ + P + G+ + + D + + ++ + + E Sbjct: 243 PTLMAEAVQGAAKGDIVGPLRSGAGLHIVKVFDAKGQQQVLQTEVKARHILIKPSIILSE 302 Query: 299 KHEAEYVKKL 308 + + + Sbjct: 303 EKAKGMLDGI 312 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 17/150 (11%), Positives = 48/150 (32%), Gaps = 4/150 (2%) Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HD 228 + + E R +L + + + + + EK++ Sbjct: 279 QQQVLQTEVKARHILIKPSIILSEEKAKGMLDGILHDIKSGKATF-ASLAEKYSEDPGSA 337 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 V G+ + + P+F++++ + + P+ T G + + ++R + Sbjct: 338 VQGGELGWSDPNVYVPEFRDMVNRLKPGELSAPFRTTHGWHIVQLEERRSQDATSKAQEQ 397 Query: 288 -LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + ++ +LR A I Sbjct: 398 RAYQLIFNRRFTEESQAWLDELRDEAYIQI 427 >gi|94971251|ref|YP_593299.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Koribacter versatilis Ellin345] gi|94553301|gb|ABF43225.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Koribacter versatilis Ellin345] Length = 369 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 54/319 (16%), Positives = 110/319 (34%), Gaps = 17/319 (5%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING- 70 F+K + L+ VP+ + + I +N ++IT D+ + + Q Sbjct: 10 FMKKILVSSFLVAALAVPMFAGDDTVVEE-IIARVNNQIITRADLRRESEQVLDQLKQQD 68 Query: 71 ---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 + +K +++LI + L + GI+ D+ + + S +D Sbjct: 69 AATADQKFVQRQKDVLRDLIDQQLLVDKGADLGISADAELIKRLDEMRKQMNLASMDDLE 128 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK--QKMKNITVREYL 179 + KQG+ FKQ + Q I V+ + + E K + + Sbjct: 129 NEAKKQGVSFEDFKQNMKNQIITQRVISQEVGSHIQITKDEEQKFYDAHKSEMERPEQVR 188 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLL 238 + +L + K N Q++ + K + + ++ G Y Sbjct: 189 LSEILVPVDAEKDPNATAAQQKAEGIIAELKAGKKFDDVAKAESAGPTAKEQGGDLGYFK 248 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPT 295 L Q ++ + + T P T++G I + + + + ++ L Sbjct: 249 RGVLAKQLEDTVFPLKEGEYTEPIRTKQGFVIIKVTEHQQSGVPPLQQIEPKLQEAVYME 308 Query: 296 KIEKHEAEYVKKLRSNAII 314 K+E Y+ KLR A I Sbjct: 309 KLEPTLRTYLTKLREEAYI 327 >gi|306845285|ref|ZP_07477861.1| Chaperone surA precursor [Brucella sp. BO1] gi|306274444|gb|EFM56251.1| Chaperone surA precursor [Brucella sp. BO1] gi|326538427|gb|ADZ86642.1| chaperone surA precursor [Brucella melitensis M5-90] Length = 317 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 67/308 (21%), Positives = 128/308 (41%), Gaps = 9/308 (2%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 +L L V ++ + ++ ++G IT+ DI R+A LKLQ+ +G L Sbjct: 9 SMLGAAVCLTALGTVAAPAFAAGESEVKVI--VSGNAITNSDIKHRMAFLKLQRKSGNLN 66 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++A EL E LK+ E++ GI V+ + A ++ + +++ G+ H Sbjct: 67 QLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSGVTPEH 126 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 FK+Y+ +Q W +V F E E K + Sbjct: 127 FKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVIFVVPASK 186 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252 + + + + ++C+ + A I DV++ ++E L ++ +++ Sbjct: 187 RSPALLAKRRQEANALRARFQNCDSTRQQAKGILDVTVRDLGRIIEPQLPGEWSKDVKAA 246 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ------NTPTKIEKHEAEYVK 306 N TT P+ T+KGVE++A+C R + + + S + K E+ +YV+ Sbjct: 247 GVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKAEELSKKYVQ 306 Query: 307 KLRSNAII 314 +LR A I Sbjct: 307 ELREKATI 314 >gi|225627181|ref|ZP_03785219.1| Chaperone surA precursor [Brucella ceti str. Cudo] gi|260168435|ref|ZP_05755246.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella sp. F5/99] gi|261757897|ref|ZP_06001606.1| SurA domain-containing protein [Brucella sp. F5/99] gi|225618016|gb|EEH15060.1| Chaperone surA precursor [Brucella ceti str. Cudo] gi|261737881|gb|EEY25877.1| SurA domain-containing protein [Brucella sp. F5/99] Length = 318 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 67/317 (21%), Positives = 130/317 (41%), Gaps = 9/317 (2%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + + +L L V ++ + ++ ++G IT+ DI R+A LK Sbjct: 1 MMFARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVI--VSGNAITNSDIKHRMAFLK 58 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 LQ+ +G L ++A EL E LK+ E++ GI V+ + A ++ + + Sbjct: 59 LQRKSGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVM 118 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ G+ HFK+Y+ +Q W +V F E E K Sbjct: 119 NQSGVTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQ 178 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + + + + ++C+ + A I DV++ ++E L Sbjct: 179 VIFVVPASKRSPALLAKRRQEANALRARFQNCDSTRQQAKGILDVTVRDLGRIIEPQLPG 238 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ------NTPTKI 297 ++ +++ N TT P+ T+KGVE++A+C R + + + S + K Sbjct: 239 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSVEGADSPAGQEKKA 298 Query: 298 EKHEAEYVKKLRSNAII 314 E+ +YV++LR A I Sbjct: 299 EELSKKYVQELREKATI 315 >gi|23501571|ref|NP_697698.1| peptidyl-prolyl cis-trans isomerase [Brucella suis 1330] gi|62289646|ref|YP_221439.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 1 str. 9-941] gi|82699574|ref|YP_414148.1| peptidyl-prolyl cis-trans isomerase [Brucella melitensis biovar Abortus 2308] gi|189023896|ref|YP_001934664.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus S19] gi|225852204|ref|YP_002732437.1| chaperone SurA [Brucella melitensis ATCC 23457] gi|237815137|ref|ZP_04594135.1| Chaperone surA precursor [Brucella abortus str. 2308 A] gi|254697090|ref|ZP_05158918.1| Chaperone surA precursor [Brucella abortus bv. 2 str. 86/8/59] gi|254701467|ref|ZP_05163295.1| Chaperone surA precursor [Brucella suis bv. 5 str. 513] gi|254704014|ref|ZP_05165842.1| Chaperone surA precursor [Brucella suis bv. 3 str. 686] gi|254707612|ref|ZP_05169440.1| Chaperone surA precursor [Brucella pinnipedialis M163/99/10] gi|254709805|ref|ZP_05171616.1| Chaperone surA precursor [Brucella pinnipedialis B2/94] gi|254713809|ref|ZP_05175620.1| Chaperone surA precursor [Brucella ceti M644/93/1] gi|254717133|ref|ZP_05178944.1| Chaperone surA precursor [Brucella ceti M13/05/1] gi|254729986|ref|ZP_05188564.1| Chaperone surA precursor [Brucella abortus bv. 4 str. 292] gi|256031296|ref|ZP_05444910.1| Chaperone surA precursor [Brucella pinnipedialis M292/94/1] gi|256060809|ref|ZP_05450969.1| Chaperone surA precursor [Brucella neotomae 5K33] gi|256113220|ref|ZP_05454088.1| Chaperone surA precursor [Brucella melitensis bv. 3 str. Ether] gi|256159410|ref|ZP_05457188.1| Chaperone surA precursor [Brucella ceti M490/95/1] gi|256254704|ref|ZP_05460240.1| Chaperone surA precursor [Brucella ceti B1/94] gi|256257204|ref|ZP_05462740.1| Chaperone surA precursor [Brucella abortus bv. 9 str. C68] gi|256264288|ref|ZP_05466820.1| SurA domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|256369119|ref|YP_003106627.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella microti CCM 4915] gi|260545602|ref|ZP_05821343.1| SurA domain-containing protein [Brucella abortus NCTC 8038] gi|260757664|ref|ZP_05870012.1| SurA domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260761491|ref|ZP_05873834.1| SurA domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883474|ref|ZP_05895088.1| SurA domain-containing protein [Brucella abortus bv. 9 str. C68] gi|261218948|ref|ZP_05933229.1| SurA domain-containing protein [Brucella ceti M13/05/1] gi|261221884|ref|ZP_05936165.1| SurA domain-containing protein [Brucella ceti B1/94] gi|261315102|ref|ZP_05954299.1| SurA domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261317343|ref|ZP_05956540.1| SurA domain-containing protein [Brucella pinnipedialis B2/94] gi|261321553|ref|ZP_05960750.1| SurA domain-containing protein [Brucella ceti M644/93/1] gi|261324801|ref|ZP_05963998.1| SurA domain-containing protein [Brucella neotomae 5K33] gi|261752010|ref|ZP_05995719.1| SurA domain-containing protein [Brucella suis bv. 5 str. 513] gi|261754669|ref|ZP_05998378.1| SurA domain-containing protein [Brucella suis bv. 3 str. 686] gi|265988381|ref|ZP_06100938.1| SurA domain-containing protein [Brucella pinnipedialis M292/94/1] gi|265994631|ref|ZP_06107188.1| SurA domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|265997847|ref|ZP_06110404.1| SurA domain-containing protein [Brucella ceti M490/95/1] gi|294852046|ref|ZP_06792719.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. NVSL 07-0026] gi|297248054|ref|ZP_06931772.1| peptidyl-prolyl cis-trans isomerase SurA [Brucella abortus bv. 5 str. B3196] gi|306842051|ref|ZP_07474724.1| Chaperone surA precursor [Brucella sp. BO2] gi|23347483|gb|AAN29613.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella suis 1330] gi|62195778|gb|AAX74078.1| peptidyl-prolyl cis-trans isomerase, hypothetical [Brucella abortus bv. 1 str. 9-941] gi|82615675|emb|CAJ10662.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella melitensis biovar Abortus 2308] gi|189019468|gb|ACD72190.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella abortus S19] gi|225640569|gb|ACO00483.1| Chaperone surA precursor [Brucella melitensis ATCC 23457] gi|237789974|gb|EEP64184.1| Chaperone surA precursor [Brucella abortus str. 2308 A] gi|255999279|gb|ACU47678.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella microti CCM 4915] gi|260097009|gb|EEW80884.1| SurA domain-containing protein [Brucella abortus NCTC 8038] gi|260667982|gb|EEX54922.1| SurA domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260671923|gb|EEX58744.1| SurA domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260873002|gb|EEX80071.1| SurA domain-containing protein [Brucella abortus bv. 9 str. C68] gi|260920468|gb|EEX87121.1| SurA domain-containing protein [Brucella ceti B1/94] gi|260924037|gb|EEX90605.1| SurA domain-containing protein [Brucella ceti M13/05/1] gi|261294243|gb|EEX97739.1| SurA domain-containing protein [Brucella ceti M644/93/1] gi|261296566|gb|EEY00063.1| SurA domain-containing protein [Brucella pinnipedialis B2/94] gi|261300781|gb|EEY04278.1| SurA domain-containing protein [Brucella neotomae 5K33] gi|261304128|gb|EEY07625.1| SurA domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261741763|gb|EEY29689.1| SurA domain-containing protein [Brucella suis bv. 5 str. 513] gi|261744422|gb|EEY32348.1| SurA domain-containing protein [Brucella suis bv. 3 str. 686] gi|262552315|gb|EEZ08305.1| SurA domain-containing protein [Brucella ceti M490/95/1] gi|262765744|gb|EEZ11533.1| SurA domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|263094548|gb|EEZ18357.1| SurA domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|264660578|gb|EEZ30839.1| SurA domain-containing protein [Brucella pinnipedialis M292/94/1] gi|294820635|gb|EFG37634.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. NVSL 07-0026] gi|297175223|gb|EFH34570.1| peptidyl-prolyl cis-trans isomerase SurA [Brucella abortus bv. 5 str. B3196] gi|306287892|gb|EFM59312.1| Chaperone surA precursor [Brucella sp. BO2] gi|326408703|gb|ADZ65768.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella melitensis M28] Length = 318 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 67/317 (21%), Positives = 130/317 (41%), Gaps = 9/317 (2%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + + +L L V ++ + ++ ++G IT+ DI R+A LK Sbjct: 1 MMFARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVI--VSGNAITNSDIKHRMAFLK 58 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 LQ+ +G L ++A EL E LK+ E++ GI V+ + A ++ + + Sbjct: 59 LQRKSGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVM 118 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ G+ HFK+Y+ +Q W +V F E E K Sbjct: 119 NQSGVTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQ 178 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + + + + ++C+ + A I DV++ ++E L Sbjct: 179 VIFVVPASKRSPALLAKRRQEANALRARFQNCDSTRQQAKGILDVTVRDLGRIIEPQLPG 238 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ------NTPTKI 297 ++ +++ N TT P+ T+KGVE++A+C R + + + S + K Sbjct: 239 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKA 298 Query: 298 EKHEAEYVKKLRSNAII 314 E+ +YV++LR A I Sbjct: 299 EELSKKYVQELREKATI 315 >gi|107023645|ref|YP_621972.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia AU 1054] gi|116690730|ref|YP_836353.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia HI2424] gi|170734072|ref|YP_001766019.1| SurA domain-containing protein [Burkholderia cenocepacia MC0-3] gi|122070635|sp|Q1BTQ6|SURA_BURCA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|105893834|gb|ABF76999.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia AU 1054] gi|116648819|gb|ABK09460.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia HI2424] gi|169817314|gb|ACA91897.1| SurA domain [Burkholderia cenocepacia MC0-3] Length = 452 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 99/302 (32%), Gaps = 22/302 (7%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVE 83 + ++ + +N +VIT ++ +R+ L+ + L + ++++E Sbjct: 32 GSQGAQLADEVVAVVNNDVITGRELDQRVGLIARRLQQQNAPVPPADQLRAQVLNQMVLE 91 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 ++ Q+ + GI D TV + A+ G++ + + L+ QG+ + F + + Sbjct: 92 RIQVQKAKDDGIRIDDATVQATLQRLAQANGMTLDQYRGRLEAQGVPWSIFTNDARTELM 151 Query: 144 WPDVVKNDFMLKYGNLEMEIPAN----KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + K + E+ + + + + + + Q Sbjct: 152 LSKLREREVDGKITVSDAEVANYIASQRGPNASQQQDLRFQHIFIKAPTNAPQADIEAAQ 211 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 K+ + + + G + S L + K + N Sbjct: 212 KKADALLQQAKSGADFERLAKNNSEANDAKKGGDLGFKSPSALPADVVDAASKLRPGQVN 271 Query: 260 P--YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLR 309 P G E + + D+R G A ++ + K E + + +R Sbjct: 272 PTLIRVPDGFEIVRLVDRRQSQGASAAAPKIVQTHVRHILLRVGEGKSEGQARQQLVDIR 331 Query: 310 SN 311 + Sbjct: 332 NQ 333 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 29/287 (10%), Positives = 89/287 (31%), Gaps = 19/287 (6%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 ++G+ IT D ++ + Q+ ++ + +K + Sbjct: 160 VDGK-ITVSD-AEVANYIASQRGPNASQQQDL-RFQHIFIKAPTNAPQADIEAAQKKADA 216 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN--------------D 151 +Q A++ + + + + ++ DVV Sbjct: 217 LLQQAKSGADFERLAKNNSEANDAKKGGDLGFKSPSALPADVVDAASKLRPGQVNPTLIR 276 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + + Q + + + +++G ++++ D Sbjct: 277 VPDGFEIVRLVDRRQSQGASAAAPKIVQTHVRHILLRVGEGKSEGQARQQLVDIRNQVEA 336 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 ++ G ++ + P+F+ + + P T+ G I Sbjct: 337 GGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQDGQISQPIRTEYGYHLI 396 Query: 271 AICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++R+ G + + + K E+ A+++++LR ++ + Y Sbjct: 397 QVLNRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSYVQY 443 >gi|149912930|ref|ZP_01901464.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseobacter sp. AzwK-3b] gi|149813336|gb|EDM73162.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseobacter sp. AzwK-3b] Length = 285 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 79/306 (25%), Gaps = 53/306 (17%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQK---ING 70 + L I V + S + T+NG IT G + A L Q Sbjct: 6 KLFPALAIVAAVGFAQAPAAQDSPDIDTVLATVNGTDITLGHMIALRASLPAQYGQLPPE 65 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 L + +LI +TL SF + Sbjct: 66 ILFNGILDQLIQQTLL---------------------------------MQSFEGEVSKR 92 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + + +V++ + +++ ++ EY +L Sbjct: 93 SALVLENERRAILATEVIEKVMQGALTDADIQAAYEERYASAGQETEYKAAHIL------ 146 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP-QFQNL 249 ++ +D + ++ + G + + F + Sbjct: 147 -----VETEETARDLIAQLEGGADFATLARENSTGPSGPNGGDLGWFGPGVMVESFFNAV 201 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + P TQ G I + + R E + A+ T ++ +V L Sbjct: 202 ASLEPGQVSEPVQTQFGWHVIKLNETR--LTETPPLEEVRAEIEETLQQEKFDAHVDTLT 259 Query: 310 SNAIIH 315 A I Sbjct: 260 DQATIE 265 >gi|92116105|ref|YP_575834.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter hamburgensis X14] gi|91798999|gb|ABE61374.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter hamburgensis X14] Length = 308 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 88/313 (28%), Gaps = 47/313 (15%) Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---SKRIALL 63 T S ++L + + + + + + + +NG I D+ + + Sbjct: 8 TKHSLRVRLALSALGGCLALTLLVGTPVRADDLNPVLAKVNGSEIRQSDVNVAEEELGPG 67 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 Q ++ + LI + + E I + Sbjct: 68 LAQMDPAAKQENVLSFLIDMKIIAKAAEDKKIENSEDFKKRL------------------ 109 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + + + ++ ++ + M+ + + E R + Sbjct: 110 ------------AFARDRLLMDKLLASEGKAAITDEAMKTVYADASKQITSEEEVHARHI 157 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 L ++ K E+ + +K + G + + + Sbjct: 158 LVP-----------TEEEAKKVEDELKKGADFAELAKKESKDPGASDGGDLGFFTKEQMV 206 Query: 244 PQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 P+F + ++P TQ G I + +KR + Q K +A Sbjct: 207 PEFSKVAFALEPGKISDPVKTQFGWHIIKVEEKRARKA--PAFDQVKPQIEQFVTRKAQA 264 Query: 303 EYVKKLRSNAIIH 315 +YV KLR A I Sbjct: 265 DYVAKLRETAKIE 277 >gi|163737941|ref|ZP_02145357.1| preprotein translocase ATPase subunit [Phaeobacter gallaeciensis BS107] gi|161388557|gb|EDQ12910.1| preprotein translocase ATPase subunit [Phaeobacter gallaeciensis BS107] Length = 283 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 89/299 (29%), Gaps = 50/299 (16%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKIAV 77 + + + +S + ++ + T+NGE IT G + A L Q L + Sbjct: 11 LALTVALTLPISTAAEPHANTVVATVNGEEITIGHMIIARATLPQQYQQLPDDVLYDAIL 70 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 +LI +T KQE + + Sbjct: 71 DQLIQQTSLKQE---------------------------------LNGEVPKYVALSLEN 97 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 A + DV++ + ++ +++ E+ +L ++ + Sbjct: 98 EARSLLAADVIEKVMENAASDEDLRTAYDEKYTDGTGGDEFNASHILVETEEDAADIRAE 157 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNN 256 + + ++ + G+ + + + PQF+ + + Sbjct: 158 LDA-----------GADFATLARERSTGPSGPNGGELGWFSKGRMVPQFEEAVLVMGAGD 206 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++P TQ G I + D+R + + ++ + V L + A I Sbjct: 207 VSDPVQTQFGWHVIKLNDRRTSAA--PTFDEVREELATQMRQEAVEDRVLSLTTAATIE 263 >gi|163842954|ref|YP_001627358.1| chaperone surA precursor [Brucella suis ATCC 23445] gi|163673677|gb|ABY37788.1| Chaperone surA precursor [Brucella suis ATCC 23445] Length = 318 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 67/317 (21%), Positives = 130/317 (41%), Gaps = 9/317 (2%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + + +L L V ++ + ++ ++G IT+ DI R+A LK Sbjct: 1 MMFARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVI--VSGNAITNSDIKHRMAFLK 58 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 LQ+ +G L ++A EL E LK+ E++ GI V+ + A ++ + + Sbjct: 59 LQRKSGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVM 118 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ G+ HFK+Y+ +Q W +V F E E K Sbjct: 119 NQSGVTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQ 178 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + + + + ++C+ + A I DV++ ++E L Sbjct: 179 VIFVLPASKRSPALLAKRRQEANALRARFQNCDSTRQQAKGILDVTVRDLGRIIEPQLPG 238 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ------NTPTKI 297 ++ +++ N TT P+ T+KGVE++A+C R + + + S + K Sbjct: 239 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKA 298 Query: 298 EKHEAEYVKKLRSNAII 314 E+ +YV++LR A I Sbjct: 299 EELSKKYVQELREKATI 315 >gi|17987548|ref|NP_540182.1| survival protein surA precursor (peptidyl-prolyl cis-trans isomerase surA) [Brucella melitensis bv. 1 str. 16M] gi|265990795|ref|ZP_06103352.1| SurA domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|17983251|gb|AAL52446.1| survival protein sura precursor (peptidyl-prolyl cis-trans isomerase sura) [Brucella melitensis bv. 1 str. 16M] gi|263001579|gb|EEZ14154.1| SurA domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] Length = 317 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 68/308 (22%), Positives = 128/308 (41%), Gaps = 9/308 (2%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 +L L V ++ + ++ ++G IT+ DI R+A LKLQ+ +G L Sbjct: 9 SMLGAAVCLTALGTVAAPAFAAGESEVKVI--VSGNAITNSDIKHRMAFLKLQRKSGNLN 66 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++A EL E LK+ E++ GI VN + A ++ + +++ G+ H Sbjct: 67 QLARNELTEEMLKRIEMKSLGINISDKEVNDAYAGFASRNKMTLAQLNQVMNQSGVTPEH 126 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 FK+Y+ +Q W +V F E E K + Sbjct: 127 FKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVIFVVPASK 186 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252 + + + + ++C+ + A I DV++ ++E L ++ +++ Sbjct: 187 RSPALLAKRRQEANALRARFQNCDSTRQQAKGILDVTVRDLGRIIEPQLPGEWSKDVKAA 246 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ------NTPTKIEKHEAEYVK 306 N TT P+ T+KGVE++A+C R + + + S + K E+ +YV+ Sbjct: 247 GVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKAEELSKKYVQ 306 Query: 307 KLRSNAII 314 +LR A I Sbjct: 307 ELREKATI 314 >gi|256044377|ref|ZP_05447281.1| survival protein surA precursor (peptidyl-prolyl cis-trans isomerase surA) [Brucella melitensis bv. 1 str. Rev.1] gi|260563729|ref|ZP_05834215.1| SurA domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|260153745|gb|EEW88837.1| SurA domain-containing protein [Brucella melitensis bv. 1 str. 16M] Length = 318 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 68/317 (21%), Positives = 130/317 (41%), Gaps = 9/317 (2%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + + +L L V ++ + ++ ++G IT+ DI R+A LK Sbjct: 1 MMFARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVI--VSGNAITNSDIKHRMAFLK 58 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 LQ+ +G L ++A EL E LK+ E++ GI VN + A ++ + + Sbjct: 59 LQRKSGNLNQLARNELTEEMLKRIEMKSLGINISDKEVNDAYAGFASRNKMTLAQLNQVM 118 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ G+ HFK+Y+ +Q W +V F E E K Sbjct: 119 NQSGVTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQ 178 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + + + + ++C+ + A I DV++ ++E L Sbjct: 179 VIFVVPASKRSPALLAKRRQEANALRARFQNCDSTRQQAKGILDVTVRDLGRIIEPQLPG 238 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ------NTPTKI 297 ++ +++ N TT P+ T+KGVE++A+C R + + + S + K Sbjct: 239 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKA 298 Query: 298 EKHEAEYVKKLRSNAII 314 E+ +YV++LR A I Sbjct: 299 EELSKKYVQELREKATI 315 >gi|209548668|ref|YP_002280585.1| peptidyl-prolyl cis-trans isomerase protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534424|gb|ACI54359.1| putative peptidyl-prolyl cis-trans isomerase protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 314 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 77/291 (26%), Positives = 139/291 (47%), Gaps = 10/291 (3%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 +S ++ +NG IT GD++KR A ++LQ + K A ++LI ETLK+QE+ + Sbjct: 25 APALAASEVKAVVNGTAITSGDVAKRQAFMRLQHTKADA-KAAEEQLIDETLKRQEVSRV 83 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 ++ V+ F + + LS E S LD+ G+G +HFK ++A+Q WP VV + Sbjct: 84 HMSVSQQDVDASFARFSAGNKLSVEQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARYG 143 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 ++ + + + + KR +AE SR + P Sbjct: 144 STSRLSNYDLVSRMMQNNKQKPVTTEYMLQQIIFVIPQAKRNAITGKRKGEAEASRSKFP 203 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273 ++ + FA+ + DVS+ +L ++ P ++ L+++++ NTT VT KGVEY+AIC Sbjct: 204 GC-DQAKVFAATMRDVSVRDLGRMLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAIC 262 Query: 274 DKRDLGGEIALKAYLSAQNTPTKI--------EKHEAEYVKKLRSNAIIHY 316 +R + + A + ++ ++ +Y+ +LR A I Y Sbjct: 263 SQRQVSDDQAAEMVFRQEDLGKAKGGKDASPENENSKKYLDELRKKAQIAY 313 >gi|115522177|ref|YP_779088.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisA53] gi|115516124|gb|ABJ04108.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisA53] Length = 309 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 47/305 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---SKRIALLKLQKINGE 71 + C++ ++ + +NG I D+ + +A Q Sbjct: 13 RFGLACAAVTGCLLMAAVPVRAQDANPVVAKVNGTEIRQSDLTLAEEELAPNLAQMDPAA 72 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 ++ + LI + + E I ++ + Sbjct: 73 RKENVLAFLIDMRIVAKAAEDKKIADRADFKSRL-------------------------- 106 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + ++ + M+ + E R +L D Sbjct: 107 ----DFARNRILMDQLLAAEGKAAATGDAMKKVYEDAAKQIAGEPEVHARHILVETEDEA 162 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 ++K +K + G + + + P+F Sbjct: 163 KAVVEELKK-----------GADFAELAKKKSKDPGAADGGDLGFFTKDQMVPEFSTAAF 211 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + P +Q G I + +KR+ + Q K +A+YV KLR+ Sbjct: 212 ALEPGKVSEPVKSQFGWHVIKVEEKRNRKA--PDFDQVKGQIETYVARKAQADYVTKLRA 269 Query: 311 NAIIH 315 A I Sbjct: 270 EAKIE 274 >gi|121606958|ref|YP_984287.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas naphthalenivorans CJ2] gi|120595927|gb|ABM39366.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas naphthalenivorans CJ2] Length = 469 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 89/298 (29%), Gaps = 21/298 (7%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQELIVETLK 86 + + I +N E IT+ ++ ++ + Q EL ++ +I + + Sbjct: 56 AQQQADFIVVVVNSEPITNNEVRTKLLRTEQQLKQQSIALPPRSELMPQLLERMISDKAQ 115 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 Q + +G D N V AR ++ ++ L GI F+ + + + Sbjct: 116 LQAAQATGFKIDDNAVEGAVQTVARQNQITVDELRRRLKADGIDYAQFRSEIRDELLISR 175 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV-------LFSIPDNKLQNQGFVQ 199 + + + + EMEI + + + + + +Q Sbjct: 176 LRQREVESRINVSEMEIDDYLRSQEGKPGAAGAAPAALNLAEILVAVPENATPEQVASLQ 235 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT 258 + + E + ++ + G+ P F + Sbjct: 236 AKARQVLERAKAGADFAALATEVSAAASRSNGGQIGLRSADRYPPLFVEATQSLPAGGLA 295 Query: 259 NPYVTQKGVEYIAICDKR-----DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 P + G + + +KR D ++ + TP E E + + Sbjct: 296 GPVRSAAGFHILKVIEKRQGGLPDAVITQTHARHILLRLTPQLTEAAAVEKLAGFKKR 353 Score = 92.8 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 18/167 (10%), Positives = 52/167 (31%), Gaps = 2/167 (1%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ +Q V + +L V+K + Sbjct: 298 VRSAAGFHILKVIEKRQGGLPDAVITQTHARHILLRLTPQLTEAAAVEKLAGFKKRIVAG 357 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + + G ++ P+F+ ++ + N ++P V++ GV + Sbjct: 358 QADFAALARENSQDASAKQGGDLGWVPGGAFVPEFEKVMNALAPNQVSDPLVSRFGVHLV 417 Query: 271 AICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++R+ + + K + + + +R A + + Sbjct: 418 QVLERREAPVSPRDQREMVRGMLREKKQNEAYVRWAEDIRGRAYVEF 464 >gi|163868025|ref|YP_001609229.1| peptidyl-prolyl cis-trans isomerase [Bartonella tribocorum CIP 105476] gi|161017676|emb|CAK01234.1| Peptidyl-prolyl cis-trans isomerase [Bartonella tribocorum CIP 105476] Length = 322 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 71/324 (21%), Positives = 128/324 (39%), Gaps = 11/324 (3%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDI 56 M ++ ++ K L F + ++ S + I T+NG IT+ DI Sbjct: 1 MRKPIY--MNKLKKRLLALFCIASLGVSSLLINEFLISSAFAQTAIVVTVNGNPITNYDI 58 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +R+A L+LQ+ G L A +ELI E LK EI++ I ++ VN F A ++ Sbjct: 59 QRRVAFLRLQQKQGSLAAQAKKELIDEELKNIEIKRRNIEVSNDEVNRAFENFATQNNMT 118 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + + L + I HFK Y+ Q W +V + + G + + + Sbjct: 119 VDQLNQILIQNDITVQHFKDYIRGQIGWGRLVSARYQAQTGMVSEQEAVRRILKNGGVKP 178 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 T+ + + + +R + + + C A I DV+I Sbjct: 179 STNEYTLQRIVFVIPAHRRSEILERRQREASNFRAHFRGCANAHNQARGILDVTIRPLGK 238 Query: 237 LLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP- 294 LE L ++ + + T T G+E IA+C + + + + S Q+ Sbjct: 239 FLEPQLPSAWEQAILATPAGKMTKLQETSDGIEAIAVCKIKRISDDYVARLIFSLQDNKK 298 Query: 295 ---TKIEKHEAEYVKKLRSNAIIH 315 K+E+ +Y+++LR A I Sbjct: 299 RDPKKLEELSEKYLEELRRVARIQ 322 >gi|148559269|ref|YP_001258666.1| putative peptidyl-prolyl cis-trans isomerase [Brucella ovis ATCC 25840] gi|148370526|gb|ABQ60505.1| putative peptidyl-prolyl cis-trans isomerase [Brucella ovis ATCC 25840] Length = 318 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 66/317 (20%), Positives = 129/317 (40%), Gaps = 9/317 (2%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + + +L L V ++ + ++ ++G IT+ DI R+A LK Sbjct: 1 MMFARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVI--VSGNAITNSDIKHRMAFLK 58 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 LQ+ +G L ++A EL E LK+ E++ I V+ + A ++ + + Sbjct: 59 LQRKSGNLNQLARNELTEEMLKRIEMKSRSINISDKEVDDAYAGFASRNKMTLAQLNQVM 118 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ G+ HFK+Y+ +Q W +V F E E K Sbjct: 119 NQSGVTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQ 178 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + + + + ++C+ + A I DV++ ++E L Sbjct: 179 VIFVVPASKRSPALLAKRRQEANALRARFQNCDSTRQQAKGILDVTVRDLGRIIEPQLPG 238 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ------NTPTKI 297 ++ +++ N TT P+ T+KGVE++A+C R + + + S + K Sbjct: 239 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKA 298 Query: 298 EKHEAEYVKKLRSNAII 314 E+ +YV++LR A I Sbjct: 299 EELSKKYVQELREKATI 315 >gi|167561603|ref|ZP_02354519.1| survival protein SurA, putative [Burkholderia oklahomensis EO147] Length = 452 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 39/336 (11%), Positives = 107/336 (31%), Gaps = 25/336 (7%) Query: 1 MTSKVFTSL--SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK 58 M + + S + L T + + + +++ + +N +VIT ++ + Sbjct: 1 MKKTLRFAAVASGLVASLITVAPAASAQALRALRAQGASLADEVVAVVNNDVITGRELDQ 60 Query: 59 RIALLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 R+ L+ + +L + ++++E ++ Q + GI D+ TV + A Sbjct: 61 RVGLIARRLQQQKAPVPPIDQLRAQVLNQMVLERIQIQRAKDDGIVVDNATVQATLGRLA 120 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + G+ + + + ++ QG+ + F + + + + + + K + E+ + Sbjct: 121 QANGMPLDQYKARIEAQGVPWDVFVRDARTELMLSKLREKEVDGKITVSDAEVASYIASQ 180 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQG-----FVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + +K +++ + + Sbjct: 181 RGPNAGSQQDLRLEHIFVKAPTSAPQADIDVAQKKAEGLLQQALASGADFERLAKNNSEA 240 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKR------- 276 G + S L + + K + NP G E + + D+R Sbjct: 241 DDAKKGGDLGFKSPSSLPSDVVDAVSKLRPGQVNPTLVRVPDGFEIVRLVDRRASQSVSA 300 Query: 277 -DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ + K E + + +R Sbjct: 301 ASPKIVQTHVRHILLRVGEGKSESQARQQLIDIRRQ 336 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 17/168 (10%), Positives = 57/168 (33%), Gaps = 2/168 (1%) Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + + Q + + + + + +++ ++++ D Sbjct: 279 RVPDGFEIVRLVDRRASQSVSAASPKIVQTHVRHILLRVGEGKSESQARQQLIDIRRQVE 338 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269 ++ G ++ + P+F+ + +NP T+ G Sbjct: 339 AGGDFEKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNSLQDGQVSNPVRTEYGYHL 398 Query: 270 IAICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + +RD G + + + K E+ ++++++LR ++ + Sbjct: 399 IQVLGRRDAEGSVQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQI 446 >gi|154252183|ref|YP_001413007.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Parvibaculum lavamentivorans DS-1] gi|154156133|gb|ABS63350.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Parvibaculum lavamentivorans DS-1] Length = 287 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 84/304 (27%), Gaps = 47/304 (15%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---SKRIALLKLQKINGELE 73 +++ F P + K + T+NG I+ D+ + + + Sbjct: 7 AALALILSFAAAPAFAQKDEPSADEPIATVNGTPISYSDVALADEEMGAALARLEPDVRF 66 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + + LI + ++ + D ++ Sbjct: 67 QYLLGMLIDRRVVALAAKEKHVDDDPQVKRRQ--------------------------DY 100 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 F + W ++++ + + K +E R +L Sbjct: 101 FNEKALRDVYWVQLMQDKVTDEA----AKAYYEKNIAGAPAEQEAHARHIL--------- 147 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252 + + + ++++ G + ++ P+F + + Sbjct: 148 --VQDKAKAAEIAAEIEGGKGFEEAAKEYSQDPGSADGGDLGWFKRDEMVPEFGEAVFSM 205 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + P TQ G I + + RD+ + + + ++KLR++A Sbjct: 206 KPGEVSAPVQTQFGWHLIQLVELRDVP--KPTYEEAHEEIIRQLARQEGQKLMEKLRTDA 263 Query: 313 IIHY 316 I Sbjct: 264 KIEI 267 >gi|167617958|ref|ZP_02386589.1| survival protein SurA, putative [Burkholderia thailandensis Bt4] Length = 448 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 113/336 (33%), Gaps = 31/336 (9%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAM-------SSRIRTTINGEVITDGDISKRIA 61 + ++ L+ I S + A+ + + +N +VIT ++ +R+ Sbjct: 1 MKKTLRFAAVAAGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVG 60 Query: 62 LLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 L+ + +L + ++++E ++ Q + GI D+ TV + A+ Sbjct: 61 LIARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQAN 120 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-N 172 G+ + + + ++ QG+ + F + + + + + + K + E+ + + Sbjct: 121 GMPLDQYKARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGP 180 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH----D 228 + +R + Q + K AE + E+ A+ Sbjct: 181 NAGAQQDLRLEHIFVKAPTNAPQADIDAAQKKAEGLLQQALASGTNFERLATSQSEADDA 240 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKR----DLGGEI 282 G + S L + + K + NP G E + + D+R Sbjct: 241 KKGGDLGFKAPSSLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVDRRASQNPAASPK 300 Query: 283 ALKAYLSAQNT---PTKIEKHEAEYVKKLRSNAIIH 315 ++ ++ K E + + +R I Sbjct: 301 IVQTHVRHILLRVGEGKSESQARQQLIDIRRQ--IE 334 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 16/156 (10%), Positives = 54/156 (34%), Gaps = 2/156 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + + + + +++ ++++ D + Sbjct: 287 VDRRASQNPAASPKIVQTHVRHILLRVGEGKSESQARQQLIDIRRQIEAGGDFEKFARTY 346 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G ++ + P+F+ + +NP T+ G I + +RD G Sbjct: 347 SQDGSASQGGDLGWISPGETVPEFERAMNALQDGQVSNPVRTEYGYHLIQVLGRRDAEGS 406 Query: 282 IALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + K E+ ++++++LR ++ + Sbjct: 407 VQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQI 442 >gi|149191632|ref|ZP_01869876.1| parvulin-like peptidyl-prolyl isomerase [Vibrio shilonii AK1] gi|148834532|gb|EDL51525.1| parvulin-like peptidyl-prolyl isomerase [Vibrio shilonii AK1] Length = 419 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 34/296 (11%), Positives = 100/296 (33%), Gaps = 12/296 (4%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQE 79 + + + R+R +N VI DI L + +++ + + Sbjct: 1 MALHAIAEPVELDRVRVIVNDGVILQSDIDSATKTLTANARKNDQELPSADIIQEQILDK 60 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 LI+E L+ QE ++ G+ D N + A+N + E + ++G+ F++ + Sbjct: 61 LILEKLQLQEADRIGVRIDDNRLESTLNDIAKNNNQTIEQLRQTVREEGLTWEAFREQIR 120 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + L E+ + + + + + N +++ + Sbjct: 121 DEIAASEARNAMVRQRINILPAEVDNLAELLAKESDATVTYKIRHIQLRFNDGEDKSVQE 180 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT 258 ++ KD ++ + G ++ + ++ F + +++ Sbjct: 181 QQAKDLVARLKSGEDFATMAYTYSKGPKALEGGDWGWMRKEEMPTIFADQIKMQTKGTII 240 Query: 259 NPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 P+ + G + I D + + ++ + T ++ + + + Sbjct: 241 GPFRSGVGFHILKIEDVKGLETVSVTEVNARHILIKPTVILSDEGVQRELNNIIAK 296 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 32/269 (11%), Positives = 79/269 (29%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + KI +L + + +++ + Sbjct: 139 ILPAEVDNLAELLAKESDATVTYKIRHIQLRFNDGEDKSVQEQQAKDLVARLKSGEDFAT 198 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + I + Sbjct: 199 MAYTYSKGPKALEGGDWGWMRKEEMPTIFADQIKMQTKGTIIGPFRSGVGFHILKIEDVK 258 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKI-HD 228 TV + I + + VQ+ + + + E+++ Sbjct: 259 GLETVSVTEVNARHILIKPTVILSDEGVQRELNNIIAKVQSGESTFAEMAEQYSQDPGSA 318 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDL-GGEIALKA 286 V G+ Y P+F++ ++ + P+ T G + + D+RD+ A++ Sbjct: 319 VQGGELGYQTPELYVPEFKHQVETLPIGQISKPFKTVHGWHIVEVLDRRDVDKTGSAMQN 378 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + + ++++LR++A + Sbjct: 379 RAYRILFNRKFNEEASAWIQELRASAFVE 407 >gi|144897576|emb|CAM74440.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Magnetospirillum gryphiswaldense MSR-1] Length = 421 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 94/278 (33%), Gaps = 9/278 (3%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK-- 74 + + S M R+ IN E I+ D+ R+ L + + ++ Sbjct: 5 IVLTCATAALALTLWSGAQAQMLDRVVAVINDEAISYRDVEARVRLALVSSNIPDSQEAR 64 Query: 75 -----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 ++++I E L+ QE ++ I + V+ + + + S L +QG+ Sbjct: 65 QRVVPQVLRKMIDERLQLQEAQRLSIVLSNADVDGAIATIEQQSRMPRGALLSNLARQGV 124 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 ++ + W +V + E E+ Q + + + +F + Sbjct: 125 DPARVREQIRADLTWMRLVTRVIGPQIRIGEEEVNDRLQSLADRQGLREVRAAEIFLPVE 184 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + Q + + +E + + +F+ + G ++ + + + + Sbjct: 185 SPDQE-AEARAMGERLQEGLRQGTSFQSLARQFSRSPTSSNGGLLGWVSQGMVDDEVAAV 243 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286 + T+ T G + + + R +G + + Sbjct: 244 LETLDRGQTSQLVRTSTGFYLLQVLETRIIGQSVNAED 281 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 44/118 (37%), Gaps = 2/118 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNT 257 + + + + R K C + + A+K + + +L P+ + ++ + N Sbjct: 300 KADLMERAFALTRNAKSCAEFDALATKAGAPLPPRQGPVRIGELPPELKGMVAGMAANQV 359 Query: 258 TNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P T +G+ +C ++D + Q + + Y++ LR A I Sbjct: 360 GVPMDTPQGIMVPMVCSRQDAMVVSPPTAEQVRRQIEDERRDMLSRRYLRNLRRAAFI 417 >gi|261378504|ref|ZP_05983077.1| SurA/PPIASE domain protein [Neisseria cinerea ATCC 14685] gi|269145052|gb|EEZ71470.1| SurA/PPIASE domain protein [Neisseria cinerea ATCC 14685] Length = 331 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 34/286 (11%), Positives = 80/286 (27%), Gaps = 17/286 (5%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K G L + + +L+ ++L Q ++ Sbjct: 54 SDGIAAVADNEVITRRRLAQAVADAKANLPKGVQISDTALTEQVLMQLVNQSLIVQAGKR 113 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 + + + K V + + Sbjct: 114 R----NIQAGEAEIAAVVAQNPSLKNLSAEQRRELADSIIAEKVRQQAVMQNSRVSEAEV 169 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 E + R I + + I+ Sbjct: 170 DRFI-----EQAQKQGVTLPEGEPMRQYRAQHILIKADSENAAVGAESTIRKIYGEARSG 224 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + +++ + G + + + P F+ ++ + P TQ G I Sbjct: 225 TDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEETVRSLKPGQVSAPVRTQFGWHIIK 284 Query: 272 ICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + R+ + ++ + K E+ A+ ++ L S A + Sbjct: 285 LNEVREAGTPQERVRNAVRQYIFQQKAERATADLLRDLHSGAYVDI 330 >gi|206559288|ref|YP_002230049.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia J2315] gi|198035326|emb|CAR51201.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia J2315] Length = 442 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 99/302 (32%), Gaps = 22/302 (7%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVE 83 + ++ + +N +VIT ++ +R+ L+ + L + ++++E Sbjct: 22 GSQGAQLADEVVAVVNNDVITGRELDQRVGLIARRLQQQNAPVPPADQLRGQVLNQMVLE 81 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 ++ Q+ + GI D TV + A+ G++ + + + L+ QG+ + F + Sbjct: 82 RIQVQKAKDDGIRVDDATVQATLQRLAQANGMTLDQYRARLEAQGVPWSIFTNDARTELT 141 Query: 144 WPDVVKNDFMLKYGNLEMEIPAN----KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + K + E+ + + + + + + Q Sbjct: 142 LSKLREREVDGKITVSDAEVANYIASQRGPNASQQQDLRFQHIFIKAPTNAPQADIEAAQ 201 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 K+ + + + + G + S L K + N Sbjct: 202 KKAEALLQQAKSGADFERLAKNNSEANDAKKGGDLGFKSPSALPADVVEAASKLRPGQVN 261 Query: 260 P--YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLR 309 P G E + + D+R G A ++ + K E + + +R Sbjct: 262 PTLIRVPDGFEIVRLVDRRQSQGASAAAPKIVQTHVRHILLRVGEGKSEGQARQQLVDIR 321 Query: 310 SN 311 + Sbjct: 322 NQ 323 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 29/287 (10%), Positives = 90/287 (31%), Gaps = 19/287 (6%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 ++G+ IT D ++ + Q+ ++ + +K + Sbjct: 150 VDGK-ITVSD-AEVANYIASQRGPNASQQQDL-RFQHIFIKAPTNAPQADIEAAQKKAEA 206 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN--------------D 151 +Q A++ + + + + ++ DVV+ Sbjct: 207 LLQQAKSGADFERLAKNNSEANDAKKGGDLGFKSPSALPADVVEAASKLRPGQVNPTLIR 266 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + + Q + + + +++G ++++ D Sbjct: 267 VPDGFEIVRLVDRRQSQGASAAAPKIVQTHVRHILLRVGEGKSEGQARQQLVDIRNQVEA 326 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 ++ G ++ + P+F+ + + P T+ G I Sbjct: 327 GGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQDGQISQPIRTEYGYHLI 386 Query: 271 AICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++R+ G + + + K E+ A+++++LR ++ + Y Sbjct: 387 QVLNRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSYVQY 433 >gi|152982039|ref|YP_001352108.1| peptidyl-prolyl cis-trans isomerase SurA [Janthinobacterium sp. Marseille] gi|151282116|gb|ABR90526.1| peptidyl-prolyl cis-trans isomerase SurA [Janthinobacterium sp. Marseille] Length = 469 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 96/312 (30%), Gaps = 32/312 (10%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQELIVE 83 + ++ I +N EVIT D +R +++ + + +L++ ++ +IVE Sbjct: 42 AAVQPRLADAIIVVVNNEVITRYDFLERYKMIEARLQSQGGNLPPREQLQRQLLERMIVE 101 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + Q+ +++GI D ++ + A LS +F L++ G+ + F+ + + Sbjct: 102 RAQLQQAKETGIKIDDTMLDRAMGRIAEQNKLSMPEFRKRLEEDGLVYSKFRNEIRDEMA 161 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV----LFSIPDNKLQNQGFVQ 199 + + + K ++EI A + + + + + Sbjct: 162 IQRLREREVDNKVQVSDVEIDAYMAAHNAPAATAPQELHIAQILIRVPENATQKQLADSK 221 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT 258 +R + ++ ++ G+ + L F Sbjct: 222 RRADEVVAQLAAGADFAKLASAYSDGTDGLTGGELGWRSAERLPQLFVDATANLQDGQIA 281 Query: 259 NPYVTQKGVEYIAICDKRDLG-------------------GEIALKAYLSAQNTPTKIEK 299 + G + + +R + +++ + Sbjct: 282 PIVKSGNGFHILKLLGRRTQSVLRADGGASGATAAAAPAAVKQTHASHILIKVNQVVSAA 341 Query: 300 HEAEYVKKLRSN 311 + +L+ Sbjct: 342 EARRKLLELKQR 353 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 13/139 (9%), Positives = 48/139 (34%), Gaps = 2/139 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + + + + +K ++ + + + +++ G ++ Sbjct: 326 HASHILIKVNQVVSAAEARRKLLELKQRLDNKAATFEELAKLYSNDFSAAKGGDLGWIYP 385 Query: 240 SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQNTPTKI 297 D P+F+ + + P + G I + +++ + + K+ Sbjct: 386 GDTVPEFERAMDALPIGQVSEPIESPFGYHLILVTERKSDDVSQERQRMIARQAIREQKV 445 Query: 298 EKHEAEYVKKLRSNAIIHY 316 E+ ++++++R A + Y Sbjct: 446 EEATQDWLRQVRDRAYVEY 464 >gi|160901465|ref|YP_001567047.1| SurA domain-containing protein [Delftia acidovorans SPH-1] gi|160367049|gb|ABX38662.1| SurA domain [Delftia acidovorans SPH-1] Length = 475 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 100/299 (33%), Gaps = 18/299 (6%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL-------QKINGEL-EKIAVQELIV 82 + + I +N E +T+ ++ R+A + Q L + ++ LIV Sbjct: 61 GAKAGVRSADYIVAVVNSEPVTNNEVRARMARVAQNIAEQGGQMPPEALLAREVLERLIV 120 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E + QE + +G+ D V+ AR GL S L +G+ + F++ L Q Sbjct: 121 EKAQLQEAKDTGLRVDDYAVDQALTNVARQNGLDKAGLQSRLRAEGVNEKQFREELRRQI 180 Query: 143 IWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + D + + +I +Q+ + I + + V + Sbjct: 181 TLQRLRERDVDGRVRVTDADIDRYLAEQRSGGADKAPAAVNLGHILISVPENASPAEVAE 240 Query: 201 RIKDAEESRLRLPKDCNKL---EKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 R A+++ + L ++F+ G F + + + +Q Sbjct: 241 REARAKQAAEAARTQGDFLAVVKEFSDVPDGQGGGAMGMRPLDRYPELFTKAVGQTAQGG 300 Query: 257 TTNPYVTQKGVEYIAICDKRDLG----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 P+ + G + + +K G ++ + E A+ + + Sbjct: 301 IVGPFRSGAGFHVLKVLEKSQAGMPSVVTQNHARHILLRIGDQMTEADAAKRLADYKRR 359 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 39/282 (13%), Positives = 91/282 (32%), Gaps = 12/282 (4%) Query: 46 INGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 ++G V +TD DI + +A + + + + +++ + + Sbjct: 190 VDGRVRVTDADIDRYLAEQRSGGADKAPAAVNLGHILISVPENASPAEVAEREARAKQAA 249 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND--------FMLKY 156 + + ++FS D QG G + ++ V F Sbjct: 250 EAARTQGDFLAVVKEFSDVPDGQGGGAMGMRPLDRYPELFTKAVGQTAQGGIVGPFRSGA 309 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 G +++ Q V + R +L I D + + + Sbjct: 310 GFHVLKVLEKSQAGMPSVVTQNHARHILLRIGDQMTEADAAKRLADYKRRVDSGQASF-E 368 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 + +F+ + G + P+F+ +L ++P V++ GV I + ++ Sbjct: 369 SLAREFSQDGSARNGGDLGWASPGQFVPEFEQVLNALQPGQVSDPLVSRFGVHLIQLIER 428 Query: 276 RDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 R + + K+E ++++LR A + Y Sbjct: 429 RQAALTPREQRDMVRNVVRERKLETDYQAWLQELRGRAYVEY 470 >gi|154706423|ref|YP_001425383.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii Dugway 5J108-111] gi|154355709|gb|ABS77171.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii Dugway 5J108-111] Length = 321 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 62/327 (18%), Positives = 112/327 (34%), Gaps = 19/327 (5%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56 M K+ TS+ + T +P + +I +N E+IT ++ Sbjct: 1 MWKKILTSMVIILS--VTSISAFAQSTLPAPNATHEQSLDQIVAVVNDEIITQSELNHAL 58 Query: 57 ----SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + +K + +LI + L+ Q + + I +N +N + ++ Sbjct: 59 TAAKQQFMQRQISLPDQKTFKKQVLDQLIYQKLQLQVAKHNQIKVTNNEINAAVARISQA 118 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 LS L ++GI F+ L Q I + + +I A +++ Sbjct: 119 NHLSQTALKQKLTQEGISYKEFRSQLQKQLIISKLQHQALQDTISINKSDIAAFQKQHAG 178 Query: 173 IT-VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 EY I T+L +P + Q Q K +L+ K Sbjct: 179 QIASTEYHIATILIPLPASATQAQINHAKGKAALVLKQLQKGSSFETAMK-----MHPGS 233 Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 + +L F + +LK N T P G I + DK + Sbjct: 234 ADLGWRSAKELPQVFVKTVLKMKPNEVTGPIQAPNGFHIIKLLDKE--AKNTVSDQQIQR 291 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHYY 317 K+EK +++ +LRS+A IH Y Sbjct: 292 IVYQQKVEKALQKWLTQLRSSAYIHIY 318 >gi|238758995|ref|ZP_04620166.1| Chaperone surA [Yersinia aldovae ATCC 35236] gi|238702806|gb|EEP95352.1| Chaperone surA [Yersinia aldovae ATCC 35236] Length = 434 Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 106/296 (35%), Gaps = 16/296 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72 +++ + ++ + ++ ++ V+ D+ + +KL L Sbjct: 7 LILGLVVCANTAFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQSGQQVPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ ++ Q +K GIT ++ A ++A S L G+ + Sbjct: 67 RHQILERLIMDNIQLQMAKKMGITISDEALDKAIADIAAQNRMTAAQMRSRLAADGLNYD 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +++ + + + +V N+ + L E+ + +++ N T + + IP + Sbjct: 127 TYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQVGNQTSGDAELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 +Q V + A+ + + ++ + G+ + +L F + Sbjct: 187 PSQQQVDQAEDLAKRLVTEIKGGADFGKLAIANSADSQALKGGQMGWGKLQELPSLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKH 300 L ++ + P + G + + D R + ++ + +P + Sbjct: 247 LQSANKGDVVGPIRSGVGFHILKVNDIRGADKTVSVTEVHARHILLKPSPVMTDDQ 302 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 55/168 (32%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + K ++V E R +L +Q + A+ + Sbjct: 259 IRSGVGFHILKVNDIRGADKTVSVTEVHARHILLKPSPVMTDDQARAKLTAAAADIKSGK 318 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269 ++ + + G + P F++ + K S+ + P + G Sbjct: 319 -SSFATIAKEISQDPGSAMQGGDLGWASPDIYDPAFRDAVMKLSKGEISAPVHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R+ A + Sbjct: 378 IQLVDTRQVDKTDAAQKDKAYRMLFSRKFAEEAQTWMQEQRAAAYVKI 425 >gi|254247257|ref|ZP_04940578.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia PC184] gi|124872033|gb|EAY63749.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia PC184] Length = 454 Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 99/302 (32%), Gaps = 22/302 (7%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVE 83 + ++ + +N +VIT ++ +R+ L+ + L + ++++E Sbjct: 34 GSQGAQLADEVVAVVNNDVITGRELDQRVGLIARRLQQQNAPVPPADQLRAQVLNQMVLE 93 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 ++ Q+ + GI D TV + A+ G++ + + L+ QG+ + F + + Sbjct: 94 RIQVQKAKDDGIRIDDATVQATLQRLAQANGMTLDQYRGRLEAQGVPWSIFTNDARTELM 153 Query: 144 WPDVVKNDFMLKYGNLEMEIPAN----KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + K + E+ + + + + + + Q Sbjct: 154 LSKLREREVDGKITVSDAEVANYIASQRGPNASQQQDLRFQHIFIKAPTNAPQADIEAAQ 213 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 K+ + + + G + S L + K + N Sbjct: 214 KKADALLQQAKSGADFERLAKNNSEANDAKKGGDLGFKSPSALPADVVDAASKLRPGQVN 273 Query: 260 P--YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLR 309 P G E + + D+R G A ++ + K E + + +R Sbjct: 274 PTLIRVPDGFEIVRLVDRRQSQGASAAAPKIVQTHVRHILLRVGEGKSEGQARQQLIDIR 333 Query: 310 SN 311 + Sbjct: 334 NQ 335 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 29/287 (10%), Positives = 89/287 (31%), Gaps = 19/287 (6%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 ++G+ IT D ++ + Q+ ++ + +K + Sbjct: 162 VDGK-ITVSD-AEVANYIASQRGPNASQQQDL-RFQHIFIKAPTNAPQADIEAAQKKADA 218 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN--------------D 151 +Q A++ + + + + ++ DVV Sbjct: 219 LLQQAKSGADFERLAKNNSEANDAKKGGDLGFKSPSALPADVVDAASKLRPGQVNPTLIR 278 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + + Q + + + +++G ++++ D Sbjct: 279 VPDGFEIVRLVDRRQSQGASAAAPKIVQTHVRHILLRVGEGKSEGQARQQLIDIRNQVEA 338 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 ++ G ++ + P+F+ + + P T+ G I Sbjct: 339 GGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQDGQISQPIRTEYGYHLI 398 Query: 271 AICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++R+ G + + + K E+ A+++++LR ++ + Y Sbjct: 399 QVLNRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSYVQY 445 >gi|167590259|ref|ZP_02382647.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ubonensis Bu] Length = 452 Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 34/299 (11%), Positives = 95/299 (31%), Gaps = 22/299 (7%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVETLK 86 ++ + +N +VIT ++ +R+ L+ + + + ++++E ++ Sbjct: 35 GAQLTDEVVAVVNNDVITGRELDQRVGLISRRLKQQNAPVPPLDQMRAQVLNQMVLERIQ 94 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 Q+ + GI D V + A+ G++ + + + ++ QG+ + F + + Sbjct: 95 VQKAKDDGIRIDDAAVQSTLQRLAQANGMTLDQYRARIEAQGVPWSVFTGDARTELMLSK 154 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMK----NITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + K + E+ + + + + + + QK+ Sbjct: 155 LREREVDSKITVSDAEVASYIASQRGPSASQQQDLRFQHIFVKAPTSAPQADIEAAQKKA 214 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP-- 260 + + + G + L + + NP Sbjct: 215 DALLKQAQSGADFERLAKNNSEADDAKKGGDLGFKSPGALPADVVAAASQLRPGQVNPTL 274 Query: 261 YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLRSN 311 G E + + D+R G A ++ + K E + + +R Sbjct: 275 IRVPDGFEIVRLVDRRQSQGASAAAPKIVQTHVRHILLRVGEGKSEGQARQQLIDIRKQ 333 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 30/283 (10%), Positives = 88/283 (31%), Gaps = 16/283 (5%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQ-ELIV--------ETLKKQEIEKSGITFD 98 IT D ++ + + Q+ ++ ++ + I + + +K+ Sbjct: 161 DSKITVSD-AEVASYIASQRGPSASQQQDLRFQHIFVKAPTSAPQADIEAAQKKADALLK 219 Query: 99 SNTVNYFFVQHARNTGLSAEDFS--SFLDKQGIGDNHFKQYLAIQSIWPDVVKN--DFML 154 F + A+N + + K A Q V Sbjct: 220 QAQSGADFERLAKNNSEADDAKKGGDLGFKSPGALPADVVAAASQLRPGQVNPTLIRVPD 279 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + + + Q + + + +++G ++++ D + Sbjct: 280 GFEIVRLVDRRQSQGASAAAPKIVQTHVRHILLRVGEGKSEGQARQQLIDIRKQVEAGGD 339 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC 273 ++ G ++ + P+F+ + + P T+ G I + Sbjct: 340 FAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQDGQVSIPVRTEYGYHLIQVL 399 Query: 274 DKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++R+ G + + + K E+ A+++++LR ++ + Sbjct: 400 ERRESEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSYVQ 442 >gi|300310041|ref|YP_003774133.1| parvulin-like peptidyl-prolyl cis-trans isomerase [Herbaspirillum seropedicae SmR1] gi|124483574|emb|CAM32660.1| Parvulin-like peptidyl-prolyl [Herbaspirillum seropedicae] gi|300072826|gb|ADJ62225.1| parvulin-like peptidyl-prolyl cis-trans isomerase protein [Herbaspirillum seropedicae SmR1] Length = 496 Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 99/292 (33%), Gaps = 20/292 (6%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQK--------INGELEKIAVQELIVETLKKQEIE 91 I +N EVIT +++ R+A + + +L + V+ +IVE + Q + Sbjct: 90 DSIMVVVNNEVITRQEVADRLASVVKRMSAQNVQLPPRDQLVRQLVERMIVERAQAQMAK 149 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 ++GI D ++ + A LS F + L+ +G+ F++ + + + + + + Sbjct: 150 ENGIVVDDAMLDRAMQRIADQNKLSMAQFRTRLEAEGMNYASFREEIRREILSQRLRERE 209 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 K E E+ N + + I + + +R + AE+ + Sbjct: 210 VDNKVVVTESEVDNYLAAEANAGGQRQELDIAQILIRVPENATPDQLAQRRERAEDVLRQ 269 Query: 212 LPKDCNKLEKFASKIHDV---SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGV 267 L + + A+ S G + L F + K + + G Sbjct: 270 LKTGADFAKTAAAYSDASDALSGGDLGWRPADRLPQLFLDGVAKLQDGQVSGLLKSGNGF 329 Query: 268 EYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + +R G A ++ + + +L+ Sbjct: 330 HILKLVGRRTADGAQAAAPAVQQTHVRHILIKVNQVVTAAEAKRKLTELKER 381 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 16/139 (11%), Positives = 48/139 (34%), Gaps = 2/139 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + + + +K + E + +++ + G ++ Sbjct: 354 HVRHILIKVNQVVTAAEAKRKLTELKERLDHGSATFEELAKLYSNDLSASKGGDLGWVYP 413 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKI 297 D P+F+ + + + P T G I + +++ D + + KI Sbjct: 414 GDTVPEFERAMDQLKPGEVSQPIETPFGYHLIQVVERKTDDASKERARQAARQAIRERKI 473 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ ++++++R A + Y Sbjct: 474 DEATEDWMRQIRDRAYVEY 492 >gi|238797487|ref|ZP_04640985.1| Chaperone surA [Yersinia mollaretii ATCC 43969] gi|238718628|gb|EEQ10446.1| Chaperone surA [Yersinia mollaretii ATCC 43969] Length = 434 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 106/296 (35%), Gaps = 16/296 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72 +++ + ++ + ++ ++ V+ D+ + +KL L Sbjct: 7 LILGLVVCANTAFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQAGQQVPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ ++ Q +K GIT ++ A ++ S L G+ + Sbjct: 67 RHQILERLIMDNIQLQMAKKMGITVSDEALDKAIADIAAQNRMTTAQMRSRLAADGLNYD 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +++ + + + +V N+ + L E+ + +++ N T + + IP + Sbjct: 127 TYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQIGNQTSADAELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 +Q V + + A + + + ++ + G+ + +L F + Sbjct: 187 PSQQQVDQAEELANKLVSDIKGGADFGKLAIANSADSQALKGGQMGWGKLQELPSLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKH 300 L ++ + P + G + + D R + ++ + +P + Sbjct: 247 LQSANKGDVVGPIRSGVGFHILKVNDIRGADKTVSVTEVHARHILLKPSPVMTDDQ 302 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 55/168 (32%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + K ++V E R +L +Q + A+ + Sbjct: 259 IRSGVGFHILKVNDIRGADKTVSVTEVHARHILLKPSPVMTDDQARAKLTAAAADIKSGK 318 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269 N ++ + V G + P F++ +K + + P + G Sbjct: 319 ATF-ANIAKEISQDPGSAVQGGDLGWASPDIYDPAFRDALMKLQKGEISAPVHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R+ A + Sbjct: 378 IQVVDTRQVDKTDAAQKDRAYRMLFSRKFAEEAQTWMQEQRAAAYVKI 425 >gi|329894605|ref|ZP_08270411.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) [gamma proteobacterium IMCC3088] gi|328922959|gb|EGG30287.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) [gamma proteobacterium IMCC3088] Length = 421 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 108/311 (34%), Gaps = 12/311 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK----- 67 +K L + + + + ++ ++ +VI + ++ +R+ ++K Sbjct: 1 MKQLVKLAAGLALGCAISGAQAAVEILDKVIAVVDDDVIMESELQERLIVVKNNITSRGL 60 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + + LI+E+++ Q+ + GI + + + A GL+ + F L Sbjct: 61 EAPPEDALVRETLDRLILESIQLQKGVRYGIRIEDQQLAAAVGRLASQNGLTPQQFVDQL 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ G + + I V + + EI A + + + R + Sbjct: 121 EQSGGSYGELLANIEREMIIQRVQGGNVNQRIDITTAEIEAFLDTEEGQQLIQPAYRLIH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + + + ++ R+ ++ N++ ++ + G ESDL Sbjct: 181 ARLDVSDDIDLDA-ARTYVESLAERINAGEEFNEVIGASTDPYQFKGGDLGIRPESDLPS 239 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHE 301 F + Q + P + +I + +KR ++ + + + Sbjct: 240 LFAPIAPTMEQGSFAGPIENGRSFHFIYLLEKRGGTQIIPQTSVRHILIKPSEILTNEQA 299 Query: 302 AEYVKKLRSNA 312 E +LR A Sbjct: 300 QELAAELRQRA 310 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 32/275 (11%), Positives = 84/275 (30%), Gaps = 6/275 (2%) Query: 46 INGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 +N + IT +I + + Q++ ++ L + +++ + +S Sbjct: 148 VNQRIDITTAEIEAFLDTEEGQQLIQPAYRLIHARL--DVSDDIDLDAARTYVESLAERI 205 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + ++ D F I P + + F N Sbjct: 206 NAGEEFNEVIGASTDPYQFKGGDLGIRPESDLPSLFAPIAPTMEQGSFAGPIENGRSFHF 265 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + + T I +++ Q+ + + L + +++ Sbjct: 266 IYLLEKRGGTQIIPQTSVRHILIKPSEILTNEQAQELAAELRQRALDGEDFADLAREYSE 325 Query: 225 KI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEI 282 I G + + P F+ + ++ N T P+ +Q G + + D+RD Sbjct: 326 DIGSAQEGGDLGWASPGQMVPVFEEQMSNAELNAITEPFQSQFGWHILQVMDRRDQDVTQ 385 Query: 283 -ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K ++ +++++R A + Sbjct: 386 IVNRNRAQDYLHNQKYQEELEAWLQQIRDEAFVDI 420 >gi|332160260|ref|YP_004296837.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664490|gb|ADZ41134.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 434 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 106/296 (35%), Gaps = 16/296 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72 +++ + ++ + ++ ++ V+ D+ + +KL L Sbjct: 7 LILGLVVCANTAFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQAGQQVPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ ++ Q +K GIT ++ A ++ S L G+ + Sbjct: 67 RHQILERLIMDNIQLQMAKKMGITISDEALDKAIADIAAQNRMTPAQMRSRLAADGLNYD 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +++ + + + +V N+ + L E+ + +++ N T + + IP + Sbjct: 127 TYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQIGNQTSGDAELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 +Q V + A++ + + ++ + G+ + +L F + Sbjct: 187 PSQQQVDQAEDLAKKLVSDIKGGADFGKLAIANSADSQALKGGQMGWGKLQELPSLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKH 300 L S+ + P + G + + D R + ++ + +P + Sbjct: 247 LQSASKGDVVGPIRSGVGFHILKVNDIRGTDKTISVTEVHARHILLKPSPVMTDDQ 302 Score = 82.4 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 54/168 (32%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + K I+V E R +L +Q + A+ + Sbjct: 259 IRSGVGFHILKVNDIRGTDKTISVTEVHARHILLKPSPVMTDDQARAKLTAAAADIKSGK 318 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269 ++ + + G + P F++ +K + + P + G Sbjct: 319 ANF-ATIAKEISQDPGSAMQGGDLGWASPDIYDPAFRDALMKLQKGEISAPVHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R+ A + Sbjct: 378 IQVVDTRQVDKTDAAQKDRAYRMLFSRKFAEEAQTWMQEQRAAAYVKI 425 >gi|254688956|ref|ZP_05152210.1| Chaperone surA precursor [Brucella abortus bv. 6 str. 870] gi|260754445|ref|ZP_05866793.1| SurA domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260674553|gb|EEX61374.1| SurA domain-containing protein [Brucella abortus bv. 6 str. 870] Length = 318 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 67/317 (21%), Positives = 130/317 (41%), Gaps = 9/317 (2%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + + +L L V ++ + ++ ++G IT+ DI R+A LK Sbjct: 1 MMFARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVI--VSGNAITNSDIKHRMAFLK 58 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 LQ+ +G L ++A EL E LK+ E++ GI V+ + A ++ + + Sbjct: 59 LQRKSGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVM 118 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ G+ HFK+Y+ +Q W +V F E E K Sbjct: 119 NQSGVTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQ 178 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + + + + ++C+ + A I DV++ ++E L Sbjct: 179 VIFVVPASKRSPALLAKRRQEANALRARFQNCDSKRQQAKGILDVTVRDLGRIIEPQLPG 238 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ------NTPTKI 297 ++ +++ N TT P+ T+KGVE++A+C R + + + S + K Sbjct: 239 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKA 298 Query: 298 EKHEAEYVKKLRSNAII 314 E+ +YV++LR A I Sbjct: 299 EELSKKYVQELREKATI 315 >gi|326319525|ref|YP_004237197.1| SurA domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323376361|gb|ADX48630.1| SurA domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 476 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 41/277 (14%), Positives = 98/277 (35%), Gaps = 16/277 (5%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEKIAVQELIVETL 85 ++ + I +N E IT+ ++ R+A ++ Q L + ++ LI E + Sbjct: 64 QAARQADFIVAVVNTEPITNNEVQARLARVEHQLAAQGGERPPRQVLAREVLERLINEKI 123 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + Q +SGI D ++ AR +S + L GI F+ L Q + Sbjct: 124 QVQMAIESGIKVDDYAISQAEQSVARQNSVSIPEMHRRLAADGISPERFRSELRNQMLIQ 183 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNI-----TVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + D + ++++ + + + E + +L ++P+N ++ Sbjct: 184 RLRERDVESRVRVTDLDVDQYMRDQQQSAISDPSKIELNLANILVAVPENATPEVVEQRR 243 Query: 201 RIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT 258 + R+R +D K + + G+ F + + + Sbjct: 244 QRAQQAADRVRAGEDFAKVARELSDAPDAPIGGELGLRPADRYPDLFVRTVQQVPVGGIA 303 Query: 259 NPYVTQKGVEYIAICDK-RDLGGEIALKAYLSAQNTP 294 P + G + + ++ R A++ ++ Sbjct: 304 GPVRSPAGFHVLRVLERSRAGIPSSAVQTHVRHILLR 340 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 14/106 (13%), Positives = 38/106 (35%), Gaps = 2/106 (1%) Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + + G + P+F+ ++ + + P V++ GV I Sbjct: 366 ADFATLAREHSQDGSAKQGGDLGWAGPGRYVPEFEEAVEALKPDEISQPIVSRFGVHLIQ 425 Query: 272 ICDKRDLGGEI-ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++R+ + + K+E+ + ++ R+ A + Y Sbjct: 426 LLERREAKLTQREQRDMVRDAVREKKLEEAFTNWAQEARARAYVEY 471 >gi|238897972|ref|YP_002923652.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465730|gb|ACQ67504.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 322 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 113/311 (36%), Gaps = 13/311 (4%) Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE------- 71 +VL+ + + ++I +N VI D++ R+ +K+ N Sbjct: 6 IYVLVWLLCSHFTVFSAPKEINKIVAIVNDSVILLSDLNHRLKAIKINANNINQSLPDDA 65 Query: 72 -LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 L ++ LIVE+++ Q K G+ ++ AR L+ + S L + I Sbjct: 66 ILRHQILERLIVESIQLQIANKIGLKIPDEDLDKIIADIARKNRLTVDQIRSKLASENIN 125 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 ++ + Q + +V+KN + L E+ + + + N + + IP Sbjct: 126 YGTYRNEIRNQILISEVLKNAVQPRINILPQEVDSLSKLILNEKNQNMELNLSQILIPLT 185 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLLESDLHPQFQ 247 + +Q + K K A + +L K N + +++ G + +L F Sbjct: 186 ENPSQKEIDKAEKKANKLVSQLKKGANFAKLAIAYSADSQAFKGGTMGWKKVQELPTLFS 245 Query: 248 NLLKKSQN-NTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYV 305 LK + P + G + I D + +K K + ++ Sbjct: 246 EKLKVIHKFDIIGPIRSGVGFHILRINDLHTIFENSEDIKNQAYKILFNRKFSEQAETWI 305 Query: 306 KKLRSNAIIHY 316 ++ R++A + Sbjct: 306 QEQRASAYVKI 316 >gi|164685824|ref|ZP_01945801.2| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella burnetii 'MSU Goat Q177'] gi|165918731|ref|ZP_02218817.1| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella burnetii RSA 334] gi|212219488|ref|YP_002306275.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuK_Q154] gi|164601340|gb|EAX33680.2| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella burnetii 'MSU Goat Q177'] gi|165917559|gb|EDR36163.1| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella burnetii RSA 334] gi|212013750|gb|ACJ21130.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuK_Q154] Length = 321 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 112/327 (34%), Gaps = 19/327 (5%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56 M K+ TS+ + T +P + +I +N E+IT ++ Sbjct: 1 MWKKILTSMVIILS--VTSISAFAQSTLPAPNATHEQSLDQIVAVVNDEIITQSELNHAL 58 Query: 57 ----SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + +K + +LI + L+ Q + + I +N +N + ++ Sbjct: 59 TAAKQQFMQRQISLPDQKTFKKQVLDQLIYQKLQLQVAKHNQIKVTNNEINAAVARISQA 118 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 LS L ++GI F+ L Q I + + +I A +++ Sbjct: 119 NHLSQTALKQKLTQEGISYKEFRSQLQKQLIISKLQHQALQDTISINKSDIAAFQKQHAG 178 Query: 173 IT-VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 EY I T+L +P + Q Q K +L+ K Sbjct: 179 QIASTEYHIATILIPLPASATQAQINHAKGKAALVLKQLQKGSSFETAMK-----MHPGS 233 Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 + +L F + +LK N T P G + + DK + Sbjct: 234 ADLGWRSAKELPQVFVKTVLKMKPNEVTGPIQAPNGFHIVKLLDKE--AKNTVSDQQIQR 291 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHYY 317 K+EK +++ +LRS+A IH Y Sbjct: 292 IVYQQKVEKALQKWLTQLRSSAYIHIY 318 >gi|167568839|ref|ZP_02361713.1| survival protein SurA, putative [Burkholderia oklahomensis C6786] Length = 449 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 37/333 (11%), Positives = 105/333 (31%), Gaps = 23/333 (6%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 K + L+ + + + + +++ + +N +VIT ++ +R+ Sbjct: 1 MKKTLRFAAVASGLVASLITVAPAASAQALRAQGASLADEVVAVVNNDVITGRELDQRVG 60 Query: 62 LLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 L+ + +L + ++++E ++ Q + GI D+ TV + A+ Sbjct: 61 LIARRLQQQKAPVPPIDQLRAQVLNQMVLERIQIQRAKDDGIVVDNATVQATLGRLAQAN 120 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 G+ + + + ++ QG+ + F + + + + + + K + E+ + + Sbjct: 121 GMPLDQYKARIEAQGVPWDVFVRDARTELMLSKLREKEVDGKITVSDAEVASYIASQRGP 180 Query: 174 TVREYLIRTVLFSIPDNKLQNQG-----FVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + +K +++ + + Sbjct: 181 NAGSQQDLRLEHIFVKAPTSAPQADIDVAQKKAEGLLQQALASGADFERLAKNNSEADDA 240 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKR--------DL 278 G + S L + + K + NP G E + + D+R Sbjct: 241 KKGGDLGFKSPSSLPSDVVDAVSKLRPGQVNPTLVRVPDGFEIVRLVDRRASQSVSAASP 300 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ + K E + + +R Sbjct: 301 KIVQTHVRHILLRVGEGKSESQARQQLIDIRRQ 333 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 17/168 (10%), Positives = 57/168 (33%), Gaps = 2/168 (1%) Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + + Q + + + + + +++ ++++ D Sbjct: 276 RVPDGFEIVRLVDRRASQSVSAASPKIVQTHVRHILLRVGEGKSESQARQQLIDIRRQVE 335 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269 ++ G ++ + P+F+ + +NP T+ G Sbjct: 336 AGGDFEKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNSLQDGQVSNPVRTEYGYHL 395 Query: 270 IAICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + +RD G + + + K E+ ++++++LR ++ + Sbjct: 396 IQVLGRRDAEGSVQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQI 443 >gi|307300974|ref|ZP_07580743.1| SurA domain protein [Sinorhizobium meliloti BL225C] gi|307317709|ref|ZP_07597147.1| SurA domain protein [Sinorhizobium meliloti AK83] gi|306896471|gb|EFN27219.1| SurA domain protein [Sinorhizobium meliloti AK83] gi|306903929|gb|EFN34515.1| SurA domain protein [Sinorhizobium meliloti BL225C] Length = 315 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 88/307 (28%), Positives = 144/307 (46%), Gaps = 7/307 (2%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 I L + L V + + +S + +N VIT GD++KR+A LKLQ+ +G Sbjct: 8 IVRLLSAVALAGALSVAAGTVTTAMAASTVEVVVNSTVITSGDVAKRVAFLKLQRQSGGA 67 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + A Q+L+ E LK+ EI + + ++ V+ F + A LS E LD+ G+G + Sbjct: 68 AE-AKQQLVDEVLKRAEIARVQQSVSTDEVDAAFARFAAGNKLSPEQLGKILDQAGVGVD 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 HFKQY+A+Q WP VV + ++ + + Sbjct: 127 HFKQYIAVQMSWPRVVNFRYGSASRLSGGDLVKRMMQGGGNKPVTTEYFLQQVIFVIPES 186 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 + KR +A SR + P + + FA+ DVSI +L L ++ L++K Sbjct: 187 KRGAITAKRQAEANASRSQFPGC-DTSKAFAANYRDVSIRSLGRILAQQLPEDWKPLVEK 245 Query: 253 S-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK----HEAEYVKK 307 + TT VT+KGVEY+AIC KR + + A + A++ K + + A+Y+++ Sbjct: 246 AGDGMTTGTRVTEKGVEYLAICKKRQVNDDAAAEIVFRAEDLGKKKSEGEDPNSAKYLEE 305 Query: 308 LRSNAII 314 LRS A I Sbjct: 306 LRSKAQI 312 >gi|254693438|ref|ZP_05155266.1| Chaperone surA precursor [Brucella abortus bv. 3 str. Tulya] gi|261213691|ref|ZP_05927972.1| SurA domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|260915298|gb|EEX82159.1| SurA domain-containing protein [Brucella abortus bv. 3 str. Tulya] Length = 318 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 67/317 (21%), Positives = 130/317 (41%), Gaps = 9/317 (2%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + + +L L V ++ + ++ ++G IT+ DI R+A LK Sbjct: 1 MMFARPLIASMLGAAVFLTALGTVAAPAFAAGESEVKVI--VSGNAITNSDIKHRMAFLK 58 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 LQ+ +G L ++A EL E LK+ E++ GI V+ + A ++ + + Sbjct: 59 LQRKSGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVM 118 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ G+ HFK+Y+ +Q W +V F E E K Sbjct: 119 NQSGVTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQ 178 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + + + + ++C+ + A I DV++ ++E L Sbjct: 179 VIFVVPASKRSPALLAKRRQEANALRARFQNCDSTRQQAKGILDVTVRDLGRIIEPQLPG 238 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ------NTPTKI 297 ++ +++ N TT P+ T+KGVE++A+C R + + + S + K Sbjct: 239 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKA 298 Query: 298 EKHEAEYVKKLRSNAII 314 E+ +YV++LR A I Sbjct: 299 EELSKKYVQELREKATI 315 >gi|123440995|ref|YP_001004984.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087956|emb|CAL10744.1| survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318607170|emb|CBY28668.1| survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) [Yersinia enterocolitica subsp. palearctica Y11] Length = 434 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 106/296 (35%), Gaps = 16/296 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72 +++ + ++ + ++ ++ V+ D+ + +KL L Sbjct: 7 LILGLVVCANTAFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQAGQQVPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ ++ Q +K GIT ++ A ++ S L G+ + Sbjct: 67 RHQILERLIMDNIQLQMAKKMGITISDEALDKAIADIAAQNRMTPAQMRSRLAADGLNYD 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +++ + + + +V N+ + L E+ + +++ N T + + IP + Sbjct: 127 TYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQIGNQTSGDAELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 +Q V + A++ + + ++ + G+ + +L F + Sbjct: 187 PSQQQVDQAEDLAKKLVSDIKGGADFGKLAIANSADSQALKGGQMGWGKLQELPSLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKH 300 L S+ + P + G + + D R + ++ + +P + Sbjct: 247 LQSASKGDVVGPIRSGVGFHILKVNDIRGADKTISVTEVHARHILLKPSPVMTDDQ 302 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 54/168 (32%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + K I+V E R +L +Q + A+ + Sbjct: 259 IRSGVGFHILKVNDIRGADKTISVTEVHARHILLKPSPVMTDDQARAKLTAAAADIKSGK 318 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269 ++ + + G + P F++ +K + + P + G Sbjct: 319 ANF-ATIAKEISQDPGSAMQGGDLGWASPDIYDPAFRDALMKLQKGEISAPVHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R+ A + Sbjct: 378 IQVVDTRQVDKTDAAQKDRAYRMLFSRKFAEEAQTWMQEQRAAAYVKI 425 >gi|215919309|ref|NP_820955.2| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella burnetii RSA 493] gi|206584194|gb|AAO91469.2| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii RSA 493] Length = 321 Score = 122 bits (304), Expect = 8e-26, Method: Composition-based stats. Identities = 62/327 (18%), Positives = 113/327 (34%), Gaps = 19/327 (5%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56 M K+ TS+ + T +P + +I +N E+IT ++ Sbjct: 1 MWKKILTSMVIILS--VTSISAFAQSTLPAPNATHEQSLDQIVAVVNDEIITQSELNHAL 58 Query: 57 ----SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + +K + +LI + L+ Q + + I +N +N + ++ Sbjct: 59 TAAKQQFMQRQISLPDQKTFKKQVLDQLIYQKLQLQVAKHNQIKVTNNEINAAVARISQA 118 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 LS L ++GI F+ L Q I + + +I A +++ Sbjct: 119 NHLSQTALKQKLTQEGISYKEFRSQLQKQLIISKLQHQALQDTISINKSDIAAFQKQHAG 178 Query: 173 IT-VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 +EY I T+L +P + Q Q K +L+ K Sbjct: 179 QIASKEYHIATILIPLPASATQAQINHAKGKAALVLKQLQKGSSFETAMK-----MHPGS 233 Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 + +L F + +LK N T P G I + DK + Sbjct: 234 ADLGWRSAKELPQVFVKTVLKMKPNEVTGPIQAPNGFHIIKLLDKE--AKNTVSDQQIQR 291 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHYY 317 K+EK +++ +LRS+A IH Y Sbjct: 292 IVYQQKVEKALQKWLTQLRSSAYIHIY 318 >gi|167814327|ref|ZP_02446007.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei 91] gi|122070637|sp|Q63X78|SURA_BURPS RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor Length = 448 Score = 122 bits (304), Expect = 8e-26, Method: Composition-based stats. Identities = 38/336 (11%), Positives = 112/336 (33%), Gaps = 35/336 (10%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS-----------SRIRTTINGEVITDGDISKRIA 61 +K + + + + +++ A + + +N +VIT ++ +R+ Sbjct: 1 MKKILRFAAVASGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVG 60 Query: 62 LLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 L+ + +L + ++++E ++ Q + GI D+ TV + A+ Sbjct: 61 LIARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQAN 120 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-N 172 G+ + + + ++ QG+ + F + + + + + + K + E+ + + Sbjct: 121 GMQLDQYKARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGP 180 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFV----QKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + +R + Q + +K +++ + + Sbjct: 181 NAGSQQDLRLEHIFVKAPANAPQADIDVAQKKAEGLLQQALASGANFERLAKNQSEADDA 240 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKR----DLGGEI 282 G + + L + + K + NP G E + + ++R Sbjct: 241 KKGGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVERRASQNPAASPK 300 Query: 283 ALKAYLSAQNT---PTKIEKHEAEYVKKLRSNAIIH 315 ++ ++ K E + + +R I Sbjct: 301 IVQTHVRHILLRVGEGKSESQARQQLIDIRRQ--IE 334 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 16/156 (10%), Positives = 54/156 (34%), Gaps = 2/156 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + + + + +++ ++++ D + Sbjct: 287 VERRASQNPAASPKIVQTHVRHILLRVGEGKSESQARQQLIDIRRQIESGGDFEKFARTY 346 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G ++ + P+F+ + +NP T+ G I + +RD G Sbjct: 347 SQDGSASQGGDLGWISPGETVPEFERAMNTLQDGQVSNPVRTEYGYHLIQVLGRRDAEGS 406 Query: 282 IALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + K E+ ++++++LR ++ + Sbjct: 407 VQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQI 442 >gi|262275062|ref|ZP_06052873.1| peptidyl-prolyl cis-trans isomerase SurA [Grimontia hollisae CIP 101886] gi|262221625|gb|EEY72939.1| peptidyl-prolyl cis-trans isomerase SurA [Grimontia hollisae CIP 101886] Length = 432 Score = 122 bits (304), Expect = 8e-26, Method: Composition-based stats. Identities = 38/289 (13%), Positives = 92/289 (31%), Gaps = 15/289 (5%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGE------LEKIAVQELIVETLKKQEIEKS 93 R+ +N VI DI + L LE+ + +LI+E L+ QE ++ Sbjct: 28 DRVVAVVNDGVILSSDIDALEKTVALNADQANLPPKDVLEQQILDQLILEELQLQEAKRL 87 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 GI D + A+ LS L + GI + ++ + + + Sbjct: 88 GIRIDDTRLEQAINSIAKERNLSVSQLQERLKRNGISWSSYRDQIRREMTISEARNAQVR 147 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN---KLQNQGFVQKRIKDAEESRL 210 + L E+ + ++ + R + N + + + V + + Sbjct: 148 RRISILPQEVESLASQLNAKNLENVEYRLSHIQLRLNEGAEKEEREIVAETANRLVKELK 207 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEY 269 + + G ++ ++ F + +K + + P+ + G Sbjct: 208 DGRDFAALALANSKGPKALQGGDWGWMRLEEMPTIFADQIKNNGKGAIIGPFRSGVGYHI 267 Query: 270 IAICDK---RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + I D + + ++ + + + + ++ A I Sbjct: 268 LKITDVKGLKSVAVTEVKARHILIKPSIVLSDDGAKRQLNQMI--AQIK 314 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 51/137 (37%), Gaps = 3/137 (2%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 + P L + G ++ + + + + +++++ V G + Sbjct: 287 RHILIKPSIVLSDDGAKRQLNQMIAQIKKGEKSFEDLAKQYSADPGSAVKGGDLGWQTSE 346 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIE 298 P+F++ + + + P+ T G + + D+R + A++ K Sbjct: 347 LYVPEFKDKVDTLPEGEISEPFKTVHGWHIVQVLDRRQADRTDTAMQNRAYGMLLNRKFN 406 Query: 299 KHEAEYVKKLRSNAIIH 315 + ++++LR+ A + Sbjct: 407 EEVQAWLQELRAGAYVE 423 >gi|242238056|ref|YP_002986237.1| peptidyl-prolyl cis-trans isomerase SurA [Dickeya dadantii Ech703] gi|242130113|gb|ACS84415.1| Peptidylprolyl isomerase [Dickeya dadantii Ech703] Length = 433 Score = 122 bits (304), Expect = 8e-26, Method: Composition-based stats. Identities = 30/308 (9%), Positives = 102/308 (33%), Gaps = 15/308 (4%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72 +++ + + + + ++ ++ V+ + DI+ + +K+ L Sbjct: 7 LILGLALSANTVFAAPQVMDKVAAVVDNGVVLESDINSLMQSVKMNSQESGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G + ++ A+ ++ + S L +GI + Sbjct: 67 RHQILERLIMDNIVLQMAQKMGAQVSDDQLDRAIANIAQQNHMTLDQLRSRLAAEGINYD 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI--RTVLFSIPDN 190 ++ + DV ++ + L E+ A Q++ + + + + +L + Sbjct: 127 TYRSQIRKDMTIADVRNSEVRRRVTVLPQEVDALAQQIASQGSDKEVNLSQILLPLPENP 186 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNL 249 + + + + +++ + G+ + +L F + L Sbjct: 187 SQEQVDKAESLANRLVKDARQGADFGKLAITYSADPQALKGGQMGWGRPQELPSLFAERL 246 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRD----LGGEIALKAYLSAQNTPTKIEKHEAEYV 305 + P + G + + D R + ++ + + + + Sbjct: 247 ANPEKGQVIGPIRSGVGFHILRVNDTRGGNQAISVTETHARHILLKTSVVMNDAQARTKL 306 Query: 306 KKLRSNAI 313 + + Sbjct: 307 EDVARQIK 314 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 32/273 (11%), Positives = 76/273 (27%), Gaps = 17/273 (6%) Query: 58 KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 + + L Q + +K L L E + ++ V+ AR Sbjct: 155 QEVDALAQQIASQGSDKEV--NLSQILLPLPENPSQEQVDKAESLANRLVKDARQGADFG 212 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------FMLKYGNLEMEIPAN 166 + ++ + Q + + G + + Sbjct: 213 KLAITYSADPQALKGGQMGWGRPQELPSLFAERLANPEKGQVIGPIRSGVGFHILRVNDT 272 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + + I+V E R +L Q K A + + + + + Sbjct: 273 RGGNQAISVTETHARHILLKTSVVMNDAQART-KLEDVARQIKSGSTSFAAQAKLLSQDP 331 Query: 227 -HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIA 283 G + P F++ ++ + + P + G I + D R + + A Sbjct: 332 GSANQGGDLGWASPDMYDPAFRDALMQLKKGEISAPVRSSFGWHLIQLLDTRQVDKTDAA 391 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K K + ++++ R++A + Sbjct: 392 QKERAYRMLFNRKFAEEAQTWMQEKRASAYVKI 424 >gi|209964864|ref|YP_002297779.1| peptidyl-prolyl cis-trans isomerase family protein, putative [Rhodospirillum centenum SW] gi|209958330|gb|ACI98966.1| peptidyl-prolyl cis-trans isomerase family protein, putative [Rhodospirillum centenum SW] Length = 433 Score = 122 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 97/300 (32%), Gaps = 13/300 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSS----RIRTTINGEVITDGDI 56 M + SL + +++ V + + A R +N EVI+ D+ Sbjct: 1 MIRTLRQSLVRHLPTAAALCGVLLCAGVLLAGRPAAAQGQGPVERAAALVNEEVISMSDL 60 Query: 57 SKRIALLKLQKINGELEK-------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 R+ + + + ++ LI E L+ QE + I ++ Sbjct: 61 MNRLQMALSSSGLPDTPETRQRLLPQVLRLLIDEVLQIQEARRLEIRVTEQDIDRALENL 120 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 A+ LS +F LD G+ +Q L W +V+ + E+ A ++ Sbjct: 121 AQQNRLSLGEFQRLLDASGVPVASLRQQLLASVAWSRLVQRRIRPTVSVSDDEVQAQLER 180 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 +K + + + +F + N+ V + E +F+ Sbjct: 181 IKANAGKPEYLVSEIFL-AVDDDANEAEVSRLADRLVEQIAGGANFGAVARQFSQSAGAF 239 Query: 230 SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + G +L + L +++ + P G + + D+R + + Sbjct: 240 TGGDLGWLQQGQLEQALDTAVQQLQPGQFSRPIRGVNGYHILWLRDQRAVAAGNPADIQV 299 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 37/272 (13%), Positives = 85/272 (31%), Gaps = 15/272 (5%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS--NTVNYFFVQ 108 ++D ++ ++ +K + L+ E + + + + + Sbjct: 169 VSDDEVQAQLERIKANAGKP-------EYLVSEIFLAVDDDANEAEVSRLADRLVEQIAG 221 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW---PDVVKNDFMLKYGNLEMEIPA 165 A ++ + S G +Q Q++ + F + Sbjct: 222 GANFGAVARQFSQSAGAFTGGDLGWLQQGQLEQALDTAVQQLQPGQFSRPIRGVNG--YH 279 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 V + ++ L + +A + C+ L A + Sbjct: 280 ILWLRDQRAVAAGNPADIQVAVGQLVLPADPANPEAGLEAARQIAQEAASCDALSAAAQR 339 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 I G+A DL + +++ T P++T +G+ + +CD+ G I Sbjct: 340 IPGAQQGQAPLTRLGDLPAEISSIVGALGVGTPTQPFLTDRGIMILMVCDRMVPEGSIPP 399 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +IE + Y++ LR +A I Y Sbjct: 400 ADQVRDAIAGERIEMLQRRYLRDLRRDATIEY 431 >gi|161830191|ref|YP_001595995.1| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella burnetii RSA 331] gi|161762058|gb|ABX77700.1| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella burnetii RSA 331] Length = 321 Score = 122 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 62/327 (18%), Positives = 113/327 (34%), Gaps = 19/327 (5%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56 M K+ TS+ + T +P + +I +N E+IT ++ Sbjct: 1 MWKKILTSMVIILS--VTSISAFAQSTLPAPNATHEQSLDQIVAVVNDEIITQSELNHAL 58 Query: 57 ----SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + +K + +LI + L+ Q + + I +N +N + ++ Sbjct: 59 TAAKQQFMQRQISLPDQKTFKKQVLDQLIYQKLQLQVAKHNQIKVTNNEINAAVARISQA 118 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 LS L ++GI F+ L Q I + + +I A +++ Sbjct: 119 NHLSQTALKQKLTQEGISYKEFRSQLQKQLIISKLQHQALQDTISINKSDIAAFQKQHAG 178 Query: 173 IT-VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 +EY I T+L +P + Q Q K +L+ K Sbjct: 179 QIASKEYHIATILIPLPASATQAQINHAKGKAALILKQLQKGSSFETAMK-----MHPGS 233 Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 + +L F + +LK N T P G I + DK + Sbjct: 234 ADLGWRSAKELPQVFVKTVLKMKPNEVTGPIQAPNGFHIIKLLDKE--AKNTVSDQQIQR 291 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHYY 317 K+EK +++ +LRS+A IH Y Sbjct: 292 IVYQQKVEKALQKWLTQLRSSAYIHIY 318 >gi|238764654|ref|ZP_04625599.1| Chaperone surA [Yersinia kristensenii ATCC 33638] gi|238697146|gb|EEP89918.1| Chaperone surA [Yersinia kristensenii ATCC 33638] Length = 424 Score = 122 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 37/292 (12%), Positives = 103/292 (35%), Gaps = 16/292 (5%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIA 76 + ++ + ++ ++ V+ D+ + +KL L Sbjct: 1 MVVCANTAFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQAGQEVPDDATLRHQI 60 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 ++ LI++ ++ Q +K GIT ++ A ++ + S L G+ + +++ Sbjct: 61 LERLIMDNIQLQMAKKMGITISDEALDKAIADIAAQNRMTPDQMRSRLAADGLNYDTYRE 120 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + + +V N+ + L E+ A +++ N T + + IP + +Q Sbjct: 121 QIRKEMLTSEVRNNEVRRRITILPQEVEALAKQVGNQTSGDTELNLSHILIPLPENPSQQ 180 Query: 197 FVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252 V + A + + + ++ + G+ + +L F + L Sbjct: 181 QVDQAEDVANKLVSDIKGGADFGKLAIANSADSQALKGGQMGWGKLQELPSLFAERLQSA 240 Query: 253 SQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKH 300 ++ + P + G + + D R + ++ + +P + Sbjct: 241 NKGDVVGPIRSGVGFHILKVNDIRGGDNTVSVTEVHARHILLKPSPVMTDDQ 292 Score = 83.6 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 21/168 (12%), Positives = 53/168 (31%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + ++V E R +L +Q + A+ + Sbjct: 249 IRSGVGFHILKVNDIRGGDNTVSVTEVHARHILLKPSPVMTDDQARAKLAAAAADIKSGK 308 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269 ++ + + G + P F++ +K + + P + G Sbjct: 309 -TDFATIAKEISQDPGSAMQGGDLGWASPDIYDPAFRDALMKLKKGEISTPVHSSFGWHL 367 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R+ A + Sbjct: 368 IQVVDTRQVDKTDAAQKDRAYRMLFSRKFAEEAQTWMQEQRAAAYVKI 415 >gi|332703852|ref|ZP_08423940.1| SurA domain protein [Desulfovibrio africanus str. Walvis Bay] gi|332554001|gb|EGJ51045.1| SurA domain protein [Desulfovibrio africanus str. Walvis Bay] Length = 334 Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 106/312 (33%), Gaps = 22/312 (7%) Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL------ 72 ++ ++ + ++ + RI +NG+VIT D+ + +A +Q +L Sbjct: 29 VLLVTCALMLACLPARATEIVDRIVAVVNGQVITSYDLDRELAPYLMQLSGRKLNAQDEQ 88 Query: 73 -----EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 K + L+ + L E ++ + + V Q ++ ++ ED L ++ Sbjct: 89 QLTVVRKKLLDRLVDDILLLMEAKRLNLEVNDTEVENHIRQFRQSNSMTEEDLGRQLQRE 148 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + +K+ + + V+ K + EI + K+ + + L + Sbjct: 149 NMTREEYKRNIRESMLRHRVLSFMVRRKVLVTDEEILRYYDEHKSDYTQAKEVELGLILL 208 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 P N+ + + K++ S G L S+L Q++ Sbjct: 209 PPNEDSD--------GLVQRLGKAEISFEEAARKYSKGPGAQSGGSIGRLKWSELASQWR 260 Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEY 304 + + P+ + + ++ + + K AEY Sbjct: 261 EALAQIHPGEISEPFSIDGNKAILKLKAIIPGKERSLDEVREEIRQKLYDPKYAVQYAEY 320 Query: 305 VKKLRSNAIIHY 316 ++ L++ AI+ Sbjct: 321 MQDLKTKAIVDI 332 >gi|53718302|ref|YP_107288.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei K96243] gi|52208716|emb|CAH34652.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei K96243] Length = 450 Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 38/336 (11%), Positives = 112/336 (33%), Gaps = 35/336 (10%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS-----------SRIRTTINGEVITDGDISKRIA 61 +K + + + + +++ A + + +N +VIT ++ +R+ Sbjct: 3 MKKILRFAAVASGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVG 62 Query: 62 LLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 L+ + +L + ++++E ++ Q + GI D+ TV + A+ Sbjct: 63 LIARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQAN 122 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-N 172 G+ + + + ++ QG+ + F + + + + + + K + E+ + + Sbjct: 123 GMQLDQYKARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGP 182 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFV----QKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + +R + Q + +K +++ + + Sbjct: 183 NAGSQQDLRLEHIFVKAPANAPQADIDVAQKKAEGLLQQALASGANFERLAKNQSEADDA 242 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKR----DLGGEI 282 G + + L + + K + NP G E + + ++R Sbjct: 243 KKGGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVERRASQNPAASPK 302 Query: 283 ALKAYLSAQNT---PTKIEKHEAEYVKKLRSNAIIH 315 ++ ++ K E + + +R I Sbjct: 303 IVQTHVRHILLRVGEGKSESQARQQLIDIRRQ--IE 336 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 16/156 (10%), Positives = 54/156 (34%), Gaps = 2/156 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + + + + +++ ++++ D + Sbjct: 289 VERRASQNPAASPKIVQTHVRHILLRVGEGKSESQARQQLIDIRRQIESGGDFEKFARTY 348 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G ++ + P+F+ + +NP T+ G I + +RD G Sbjct: 349 SQDGSASQGGDLGWISPGETVPEFERAMNTLQDGQVSNPVRTEYGYHLIQVLGRRDAEGS 408 Query: 282 IALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + K E+ ++++++LR ++ + Sbjct: 409 VQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQI 444 >gi|15964904|ref|NP_385257.1| hypothetical protein SMc00581 [Sinorhizobium meliloti 1021] gi|15074083|emb|CAC45730.1| Hypothetical protein SMc00581 [Sinorhizobium meliloti 1021] Length = 316 Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 88/307 (28%), Positives = 144/307 (46%), Gaps = 7/307 (2%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 I L + L V + + +S + +N VIT GD++KR+A LKLQ+ +G Sbjct: 9 IVRLLSAVALAGALSVAAGTVTTAMAASTVEVVVNSTVITSGDVAKRVAFLKLQRQSGGA 68 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + A Q+L+ E LK+ EI + + ++ V+ F + A LS E LD+ G+G + Sbjct: 69 AE-AKQQLVDEVLKRAEIARVQQSVSTDEVDAAFARFAAGNKLSPEQLGKILDQAGVGVD 127 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 HFKQY+A+Q WP VV + ++ + + Sbjct: 128 HFKQYIAVQMSWPRVVNFRYGSASRLSGGDLVKRMMQGGGNKPVTTEYFLQQVIFVIPES 187 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 + KR +A SR + P + + FA+ DVSI +L L ++ L++K Sbjct: 188 KRGAITAKRQAEANASRSQFPGC-DTSKAFAANYRDVSIRSLGRILAQQLPEDWKPLVEK 246 Query: 253 S-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK----HEAEYVKK 307 + TT VT+KGVEY+AIC KR + + A + A++ K + + A+Y+++ Sbjct: 247 AGDGMTTGTRVTEKGVEYLAICKKRQVNDDAAAEIVFRAEDLGKKKSEGEDPNSAKYLEE 306 Query: 308 LRSNAII 314 LRS A I Sbjct: 307 LRSKAQI 313 >gi|312883922|ref|ZP_07743639.1| survival protein SurA [Vibrio caribbenthicus ATCC BAA-2122] gi|309368380|gb|EFP95915.1| survival protein SurA [Vibrio caribbenthicus ATCC BAA-2122] Length = 428 Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 108/313 (34%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +KL + + + + ++ +N VI DI + LK+ Sbjct: 1 MKLWNYIILAFLSLNINHAVAQQEVALDQVAVIVNDGVILQSDIKTAMKTLKINAKKEGQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 LE+ ++LI++T+++Q+ ++ G+ D +N + A+N + + L Sbjct: 61 TLPSNSVLEEQVTEKLILDTIQQQQADRIGVKVDDGRLNEAIEEIAKNNQQTIAELKEEL 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 K+G+ F+ + + + + L E+ + + + Sbjct: 121 QKEGLNYALFRDQVRKEISVSEARNAIVRRRINILPSEVDHLASLLSQESSATVQYKIGH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + ++ ++++ D + F+ + G ++ + ++ Sbjct: 181 IQLRVEDGDDKAQIKQQAMDIVSELEKGADFKTMAYTFSKGPKALKGGDWGWMRKEEMPT 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +++ + P+++ G + I D + + ++ + + ++ Sbjct: 241 IFADEIKMQNKGSIIGPFMSGSGFHILKIEDVKGLQTVAVTEVNARHILIKPSIILSDEG 300 Query: 301 EAEYVKKLRSNAI 313 + + ++ Sbjct: 301 VKKELIEITKRIK 313 Score = 75.9 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 30/269 (11%), Positives = 78/269 (28%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ +LL + KI +L VE + K + + Sbjct: 154 ILPSEVDHLASLLSQESSATVQYKIGHIQLRVEDGDDKAQIKQQAMDIVSELEKGADFKT 213 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + I + Sbjct: 214 MAYTFSKGPKALKGGDWGWMRKEEMPTIFADEIKMQNKGSIIGPFMSGSGFHILKIEDVK 273 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKI-HD 228 TV + I + + + V+K + + + ++ ++++ Sbjct: 274 GLQTVAVTEVNARHILIKPSIILSDEGVKKELIEITKRIKSGEVTFSQMAKQYSQDTGSG 333 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ + P+F++ L + P+ T G + + ++ + + +LK Sbjct: 334 TQGGELGFHTSDIYVPEFKHQLDTLPIGQISAPFKTVHGWHIVEVTGRKQVDRTDASLKN 393 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + +++++R+ A + Sbjct: 394 KAYRIIFNRKFNEEAGAWLQEIRAGAFVE 422 >gi|152995084|ref|YP_001339919.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinomonas sp. MWYL1] gi|150836008|gb|ABR69984.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinomonas sp. MWYL1] Length = 416 Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 104/305 (34%), Gaps = 11/305 (3%) Query: 15 LLTTYFVLIIFCIVPIVSY-KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI----N 69 L ++F LIIF + + + + I ++ + I + DI R ++K + Sbjct: 2 KLFSFFSLIIFALASVQTLHAAPTKIDGISAIVDSKPILESDIMSRFQIVKDRVPGGVMT 61 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + + ++I E L+ K G+ S+ V+ + A+N L + + L +GI Sbjct: 62 DNIHRQIQNQMIDEALQVNYARKVGMRASSSEVDNAILGVAKNMNLDLQGLKNVLADKGI 121 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 +++ + + + ++ + + E EI +IT + + I Sbjct: 122 NYERYREQIEQEILINNIKREIVKKRIAISEQEIDDYLSSDTSITKEKDQVHLRHIII-- 179 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + N +IK + + + + G + + L P F Sbjct: 180 -RASNPEEAAAKIKTIAGKIHSENDFVQQAIENSDGQFAIEGGDLGWRPLNQLPPLFVRA 238 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVK 306 L+ + P + G + + +KR + ++ + + + Sbjct: 239 LESEKGPLIGPLQSNAGFHLLWVIEKRSPDVTLQQQTKTRHILVRANEIRNMEQTKVLAD 298 Query: 307 KLRSN 311 +L Sbjct: 299 ELYKK 303 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 54/141 (38%), Gaps = 3/141 (2%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 +T + N+++N + + + ++++ + G ++ Sbjct: 274 QTKTRHILVRANEIRNMEQTKVLADELYKKLENGADFAQLAKEYSEDQGSTLQGGDLGWV 333 Query: 238 LESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPT 295 + P+F+ + K + + + P+ TQ G + + +R+ + ++ T Sbjct: 334 TLGAMVPEFEEVMKKTNIGDISKPFRTQFGWHILQVEGRREADISDKVKRSNAERALTAQ 393 Query: 296 KIEKHEAEYVKKLRSNAIIHY 316 K + ++ +LR++A I Sbjct: 394 KQDIVLGNWLDELRADAFIDI 414 >gi|207742369|ref|YP_002258761.1| peptidyl-prolyl cis-trans isomerase (rotamase c) protein [Ralstonia solanacearum IPO1609] gi|206593759|emb|CAQ60686.1| peptidyl-prolyl cis-trans isomerase (rotamase c) protein [Ralstonia solanacearum IPO1609] Length = 473 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 95/303 (31%), Gaps = 20/303 (6%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRI----ALLKLQKINGELEK----IAVQEL 80 + + +N ++IT ++ R L+ Q +++L Sbjct: 55 TASGAARSQLVDEVVAVVNTDIITRRELLDRADLVERTLQAQNRPMPARADLLGEVLEQL 114 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I+E ++ Q ++SGI V+ A+ LS S L + G+ + +++ L Sbjct: 115 ILERVQAQTAKESGIRVSDADVDRAVESVAQRNNLSVPQLKSKLAQSGLAYDKYREDLRQ 174 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKM---KNITVREYLIRTVLFSIPDNKLQNQGF 197 + + + + K + EI + +EY + +L + ++ Q Sbjct: 175 EILLARLRDREVDSKVQVFDGEIDNFLAQQGGGATGEAQEYNVAQILVPVAEDASAEQKA 234 Query: 198 VQKRIKDA-EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 + ++ + +S G+ L QF N + Sbjct: 235 AARGKAESLLKQAQGGADFAKLARDSSSGPEAAQGGELGLRSIGRLPTQFANAVVDLKPG 294 Query: 256 NTTN-PYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKIEKHEAEYVKKL 308 + G + + DKR G + K ++ + PT + L Sbjct: 295 QLAGQVIESPAGFHVLKLVDKRAPGTAASAKVAQTQVRHILIKTGPTMSADDARRQLAGL 354 Query: 309 RSN 311 R Sbjct: 355 RDR 357 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 19/178 (10%), Positives = 61/178 (34%), Gaps = 2/178 (1%) Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + G +++ + + + + I + ++ Sbjct: 290 DLKPGQLAGQVIESPAGFHVLKLVDKRAPGTAASAKVAQTQVRHILIKTGPTMSADDARR 349 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 ++ + + + +++ + G+ ++ L P+F+ + + Sbjct: 350 QLAGLRDRIVHGYDFSDAARRYSQDTSASAGGELGWVSPGQLVPEFEQAMNLLKPGEVSQ 409 Query: 260 PYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P +Q GV I + +RD + + Y + K++ +++++LR +A + Y Sbjct: 410 PVQSQFGVHLIQVEGRRDAEVPVDRQRDYARSVIREQKVQAAYEDWLRQLRDSAHVEY 467 >gi|83749338|ref|ZP_00946335.1| Peptidyl-prolyl cis-trans isomerase [Ralstonia solanacearum UW551] gi|83724016|gb|EAP71197.1| Peptidyl-prolyl cis-trans isomerase [Ralstonia solanacearum UW551] Length = 495 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 95/303 (31%), Gaps = 20/303 (6%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRI----ALLKLQKINGELEK----IAVQEL 80 + + +N ++IT ++ R L+ Q +++L Sbjct: 77 TASGAARSQLVDEVVAVVNTDIITRRELLDRADLVERTLQAQNRPMPARADLLGEVLEQL 136 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I+E ++ Q ++SGI V+ A+ LS S L + G+ + +++ L Sbjct: 137 ILERVQAQTAKESGIRVSDADVDRAVESVAQRNNLSVPQLKSKLAQSGLAYDKYREDLRQ 196 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKM---KNITVREYLIRTVLFSIPDNKLQNQGF 197 + + + + K + EI + +EY + +L + ++ Q Sbjct: 197 EILLARLRDREVDSKVQVFDGEIDNFLAQQGGGATGEAQEYNVAQILVPVAEDASAEQKA 256 Query: 198 VQKRIKDA-EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 + ++ + +S G+ L QF N + Sbjct: 257 AARGKAESLLKQAQGGADFAKLARDSSSGPEAAQGGELGLRSIGRLPTQFANAVVDLKPG 316 Query: 256 NTTN-PYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKIEKHEAEYVKKL 308 + G + + DKR G + K ++ + PT + L Sbjct: 317 QLAGQVIESPAGFHVLKLVDKRAPGTAASAKVAQTQVRHILIKTGPTMSADDARRQLAGL 376 Query: 309 RSN 311 R Sbjct: 377 RDR 379 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 19/178 (10%), Positives = 61/178 (34%), Gaps = 2/178 (1%) Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + G +++ + + + + I + ++ Sbjct: 312 DLKPGQLAGQVIESPAGFHVLKLVDKRAPGTAASAKVAQTQVRHILIKTGPTMSADDARR 371 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 ++ + + + +++ + G+ ++ L P+F+ + + Sbjct: 372 QLAGLRDRIVHGYDFSDAARRYSQDTSASAGGELGWVSPGQLVPEFEQAMNLLKPGEVSQ 431 Query: 260 PYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P +Q GV I + +RD + + Y + K++ +++++LR +A + Y Sbjct: 432 PVQSQFGVHLIQVEGRRDAEVPVDRQRDYARSVIREQKVQAAYEDWLRQLRDSAHVEY 489 >gi|207727966|ref|YP_002256360.1| peptidyl-prolyl cis-trans isomerase (rotamase c) protein [Ralstonia solanacearum MolK2] gi|206591209|emb|CAQ56821.1| peptidyl-prolyl cis-trans isomerase (rotamase c) protein [Ralstonia solanacearum MolK2] Length = 473 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 96/303 (31%), Gaps = 20/303 (6%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRI----ALLKLQKINGELEK----IAVQEL 80 + + +N ++IT ++ R L+ Q +++L Sbjct: 55 TASGAARSQLVDEVVAVVNTDIITRRELLDRADLVERTLQAQNRPMPARADLLGEVLEQL 114 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I+E ++ Q ++SGI V+ A+ LS S L + G+ + +++ L Sbjct: 115 ILERVQAQTAKESGIRVSDADVDRAVESVAQRNNLSVPQLKSKLAQSGLAYDKYREDLRQ 174 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKM---KNITVREYLIRTVLFSIPDNKLQNQGF 197 + + + + K + EI + +EY + +L + ++ Q Sbjct: 175 EILLARLRDREVDSKVQVFDGEIDNFLAQQGGGATGEAQEYNVAQILVPVAEDASAEQKA 234 Query: 198 VQK-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 + + ++ + +S G+ L QF N + Sbjct: 235 AARGKAENLLKQAQGGADFAKLARDNSSGPEAAQGGELGLRSIGRLPTQFANAVVDLKPG 294 Query: 256 NTTN-PYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKIEKHEAEYVKKL 308 + G + + DKR G + K ++ + PT + L Sbjct: 295 QLAGQVIESPAGFHVLKLVDKRAPGTAASAKVAQTQVRHILIKTGPTMSADDARRQLAGL 354 Query: 309 RSN 311 R Sbjct: 355 RDR 357 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 30/272 (11%), Positives = 80/272 (29%), Gaps = 10/272 (3%) Query: 55 DISKRIALLKLQKINGELEKIAVQELI------VETLKKQEIEKSGITFDSNTVNYFFVQ 108 +I +A E Q L+ K K+ F + Sbjct: 196 EIDNFLAQQGGGATGEAQEYNVAQILVPVAEDASAEQKAAARGKAENLLKQAQGGADFAK 255 Query: 109 HARNTGLSAEDFS--SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 AR+ E + + + G +++ Sbjct: 256 LARDNSSGPEAAQGGELGLRSIGRLPTQFANAVVDLKPGQLAGQVIESPAGFHVLKLVDK 315 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + + + + I + ++++ + + + +++ Sbjct: 316 RAPGTAASAKVAQTQVRHILIKTGPTMSADDARRQLAGLRDRIVHGYDFSDAARRYSQDT 375 Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL- 284 + G+ ++ L P+F+ + + P +Q GV I + +RD + Sbjct: 376 SASAGGELGWVSPGQLVPEFEQAMNLLKPGEVSQPVQSQFGVHLIQVEGRRDAEVPVDRQ 435 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + Y + K++ +++++LR +A + Y Sbjct: 436 RDYARSVIREQKVQAAYEDWLRQLRDSAHVEY 467 >gi|327188010|gb|EGE55240.1| putative peptidyl-prolyl cis-trans isomerase protein [Rhizobium etli CNPAF512] Length = 314 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 76/287 (26%), Positives = 138/287 (48%), Gaps = 10/287 (3%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 +S ++ +NG IT GD++KR A L+LQ + K A ++LI ETLK+QE+ + ++ Sbjct: 29 AASEVQAVVNGTAITSGDVAKRQAFLRLQHTAADA-KTAKEQLIDETLKRQEVARVHMSV 87 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 V+ F + + LS S LD+ G+G +HFK ++A+Q WP VV + Sbjct: 88 SQQDVDASFARFSAGNKLSVAQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARYGSTTR 147 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 ++ + + + + KR +AE SR + P + Sbjct: 148 LSNYDLVSRMMQNNKQKPVTTEYMLQQIIFVIPEAKRGAITGKRKGEAEASRSKFPGC-D 206 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + FA+ + DV++ +L ++ P ++ L+++++ NTT VT KGVEY+AIC +R Sbjct: 207 QAKVFAATMRDVAVRDLGRMLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAICSQRQ 266 Query: 278 LGGEIALKAYLSAQNTPTKI--------EKHEAEYVKKLRSNAIIHY 316 + + A + ++ ++ +Y+ +LR A I Y Sbjct: 267 VSDDQAAEMVFRQEDLDKSKAGKNGPPENENSKKYLDELRKKAQIAY 313 >gi|221200089|ref|ZP_03573132.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Burkholderia multivorans CGD2M] gi|221206758|ref|ZP_03579770.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Burkholderia multivorans CGD2] gi|221173413|gb|EEE05848.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Burkholderia multivorans CGD2] gi|221180328|gb|EEE12732.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Burkholderia multivorans CGD2M] Length = 453 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 101/306 (33%), Gaps = 24/306 (7%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVE 83 + ++ + +N +VIT ++ +R+ L+ + L + ++++E Sbjct: 34 GSQGAQLADEVVAVVNNDVITGRELDQRVGLISRRLQQQNAPVPPIDQLRAQVLNQMVLE 93 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 ++ Q+ + GI D TV + A+ G++ + + S L+ QG+ + F + + Sbjct: 94 RIQVQKAKDDGIRVDDATVQATLQRLAQANGMTLDQYRSRLEAQGVPWSIFTADARTELM 153 Query: 144 WPDVVKNDFMLKYGNLEMEIPAN----KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + K + E+ + + + + + + Q Sbjct: 154 LSKLREREVDSKITVSDAEVASYIASQRGPNASQQQDLRFQHIFIKAPTNAPQTQIEAAQ 213 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 K+ + + + + G + S L + K + N Sbjct: 214 KKAEALLQQATSGADFEKLAKNNSEADDAKKGGDLGFKSPSALPADVVDAAAKLRPGQVN 273 Query: 260 P--YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLR 309 P G E I + D+R G A ++ + K E + + +R Sbjct: 274 PTLIRVPDGFEIIRLVDRRQSQGATAAAPKIVQTHVRHILLRVGEGKSEGQARQQLIDIR 333 Query: 310 SNAIIH 315 I Sbjct: 334 RQ--IE 337 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 31/285 (10%), Positives = 86/285 (30%), Gaps = 18/285 (6%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIV--------ETLKKQEIEKSGITFDS 99 IT D + + N ++ + I +T + +K+ Sbjct: 163 DSKITVSDAEVASYIASQRGPNASQQQDLRFQHIFIKAPTNAPQTQIEAAQKKAEALLQQ 222 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD------NHFKQYLAIQSIWPDVVKNDFM 153 T F + A+N + + L + P +++ Sbjct: 223 ATSGADFEKLAKNNSEADDAKKGGDLGFKSPSALPADVVDAAAKLRPGQVNPTLIR--VP 280 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + + + Q + + + +++G ++++ D Sbjct: 281 DGFEIIRLVDRRQSQGATAAAPKIVQTHVRHILLRVGEGKSEGQARQQLIDIRRQIEAGG 340 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 ++ G ++ + P+F+ + + P T+ G I + Sbjct: 341 DFEKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNALQDGQISQPVRTEYGYHLIQV 400 Query: 273 CDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R+ G + + + K E+ A+++++LR ++ + Y Sbjct: 401 VGRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSYVQY 445 >gi|261408078|ref|YP_003244319.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. Y412MC10] gi|261284541|gb|ACX66512.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. Y412MC10] Length = 390 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 97/303 (32%), Gaps = 25/303 (8%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 ++ + + +V IV + + +N IT ++ + + K Sbjct: 87 MIASLVLAAALIVVLIVPPFAKGSGNEAIAKVNDVNITKDNLYDELVSVGG--------K 138 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + +I E L +QE++ IT VN + S E F+ L + G+ ++ Sbjct: 139 QTLNSMITEELIQQELKNKSITVTDADVNKEVDALKASF-PSEEQFNMALQQNGMTLDNL 197 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 K+ Q ++ K + E+ + K +R + + Sbjct: 198 KEQTKTQVELKKLM----ADKIKVTDEEVKEVYDQNKESFATPEQVRASHILVETKEEAE 253 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + ++ + G + ++ P F+ K Sbjct: 254 AI---------VKQLKEGADFATIAKEKNQDATKDTGGDLNFFGRGEMDPAFEEAAFKLK 304 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ + P + G I + D+++ K + +Q K+ Y+++L+ Sbjct: 305 KDEISEPVKSSFGYHIIKVTDRKEATNPTLEDKKEEIRSQLENQKVYAESTAYIQELKDK 364 Query: 312 AII 314 A I Sbjct: 365 ATI 367 >gi|332305313|ref|YP_004433164.1| SurA domain protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172642|gb|AEE21896.1| SurA domain protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 431 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 102/312 (32%), Gaps = 15/312 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--- 71 + T + + ++ + ++ V+ + I + ++ +K I Sbjct: 1 MKLTVVTFALLAFISFSTFAKQTRLDNVAVIVDQGVVLESQIKELVSTVKRNAITNNQTL 60 Query: 72 -----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 L A++ LIV++L+ Q ++ GI ++ AR G + E L Sbjct: 61 PSDRVLRTQAIERLIVDSLQSQMADRMGIQISDPQLDQTIDNIAREDGTTVEQLRQSLAS 120 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 +G+ +++ + + I +V + + + EI + + ++ Sbjct: 121 EGVSFEVYREQVRKELISGEVRRANVRRRIYITPQEISNLVKLIDEQGGQQAEYHLGHIL 180 Query: 187 IPDNKLQNQGFVQKRIK---DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 I V K E + +S + G ++ + + Sbjct: 181 IGFPPEPTDADVSKAKDTAEKVLELLNNGSEFAKIATASSSGSKALEGGDLGWMNINSMP 240 Query: 244 PQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTKIEK 299 F + + S+++ P + G + I D R + + ++ + + ++ Sbjct: 241 TLFAEAVQGTSKDDLIGPIRSGAGFHVLKIIDIRGIEKVEVAELKSRHILIKPSVILSDE 300 Query: 300 HEAEYVKKLRSN 311 + + + R Sbjct: 301 KAEKMLIEFRKQ 312 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 40/138 (28%), Gaps = 4/138 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 R +L + ++ ++ ++ + G + Sbjct: 287 RHILIKPSVILSDEKAEKMLIEF-RKQLLAGEADFAELAKEHSADPGSALRGGDLGWADP 345 Query: 240 SDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSAQNTPTKI 297 + P F++ K + P + G + + DKR K K Sbjct: 346 NVYVPAFRDTLQKLEVGEISQPVRSTHGWHLMQLMDKRVQDATEKRKEDKAYQLLFQRKF 405 Query: 298 EKHEAEYVKKLRSNAIIH 315 + ++K++R +A + Sbjct: 406 AEETEAWLKEMRDSAYVE 423 >gi|161523769|ref|YP_001578781.1| SurA domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189351470|ref|YP_001947098.1| peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans ATCC 17616] gi|160341198|gb|ABX14284.1| SurA domain [Burkholderia multivorans ATCC 17616] gi|189335492|dbj|BAG44562.1| peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans ATCC 17616] Length = 451 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 101/306 (33%), Gaps = 24/306 (7%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVE 83 + ++ + +N +VIT ++ +R+ L+ + L + ++++E Sbjct: 32 GSQGAQLADEVVAVVNNDVITGRELDQRVGLISRRLQQQNAPVPPIDQLRAQVLNQMVLE 91 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 ++ Q+ + GI D TV + A+ G++ + + S L+ QG+ + F + + Sbjct: 92 RIQVQKAKDDGIRVDDATVQATLQRLAQANGMTLDQYRSRLEAQGVPWSIFTADARTELM 151 Query: 144 WPDVVKNDFMLKYGNLEMEIPAN----KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + K + E+ + + + + + + Q Sbjct: 152 LSKLREREVDSKITVSDAEVASYIASQRGPNASQQQDLRFQHIFIKAPTNAPQTQIEAAQ 211 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 K+ + + + + G + S L + K + N Sbjct: 212 KKAEALLQQATSGADFEKLAKNNSEADDAKKGGDLGFKSPSALPADVVDAAAKLRPGQVN 271 Query: 260 P--YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLR 309 P G E I + D+R G A ++ + K E + + +R Sbjct: 272 PTLIRVPDGFEIIRLVDRRQSQGATAAAPKIVQTHVRHILLRVGEGKSEGQARQQLIDIR 331 Query: 310 SNAIIH 315 I Sbjct: 332 RQ--IE 335 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 31/285 (10%), Positives = 86/285 (30%), Gaps = 18/285 (6%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIV--------ETLKKQEIEKSGITFDS 99 IT D + + N ++ + I +T + +K+ Sbjct: 161 DSKITVSDAEVASYIASQRGPNASQQQDLRFQHIFIKAPTNAPQTQIEAAQKKAEALLQQ 220 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD------NHFKQYLAIQSIWPDVVKNDFM 153 T F + A+N + + L + P +++ Sbjct: 221 ATSGADFEKLAKNNSEADDAKKGGDLGFKSPSALPADVVDAAAKLRPGQVNPTLIR--VP 278 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + + + Q + + + +++G ++++ D Sbjct: 279 DGFEIIRLVDRRQSQGATAAAPKIVQTHVRHILLRVGEGKSEGQARQQLIDIRRQIEAGG 338 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 ++ G ++ + P+F+ + + P T+ G I + Sbjct: 339 DFEKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNALQDGQISQPIRTEYGYHLIQV 398 Query: 273 CDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R+ G + + + K E+ A+++++LR ++ + Y Sbjct: 399 VGRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSYVQY 443 >gi|212213438|ref|YP_002304374.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuG_Q212] gi|212011848|gb|ACJ19229.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuG_Q212] Length = 321 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 62/327 (18%), Positives = 112/327 (34%), Gaps = 19/327 (5%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56 M K+ TS+ + T +P + +I +N E+IT ++ Sbjct: 1 MWKKILTSMVVILS--VTSISAFAQSTLPAPNATHEQSLDQIVAVVNDEIITQSELNHAL 58 Query: 57 ----SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + +K + +LI + L+ Q + + I +N +N + ++ Sbjct: 59 TAAKQQFMQRQISLPDQKTFKKKVLDQLIYQKLQLQVAKHNQIKVTNNEINAAVARISQA 118 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 LS L ++GI F+ L Q I + + +I A +++ Sbjct: 119 NHLSQTALKQKLTQEGISYKEFRSQLQKQLIISKLQHQALQDTISINKSDIAAFQKQHAG 178 Query: 173 IT-VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 EY I T+L +P + Q Q K +L+ K Sbjct: 179 QIASTEYHIATILIPLPASATQAQINHAKGKAALVLKQLQKGSSFETAMK-----MHPGS 233 Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 + +L F + +LK N T P G I + DK + Sbjct: 234 ADLGWRSAKELPQVFVKTVLKMKPNEVTGPIQAPNGFHIIKLLDKE--AKNTVSDQQIQR 291 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHYY 317 K+EK +++ +LRS+A IH Y Sbjct: 292 IVYQQKVEKALQKWLTQLRSSAYIHIY 318 >gi|121611714|ref|YP_999521.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verminephrobacter eiseniae EF01-2] gi|121556354|gb|ABM60503.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verminephrobacter eiseniae EF01-2] Length = 482 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 92/297 (30%), Gaps = 19/297 (6%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVETL 85 + + I +N E +T+ ++ R+ + Q L ++ LI+E + Sbjct: 69 SATGWADFIVAVVNSEPVTNNEVRSRLVRAEAQIARQGASMPSREWLAHEVLERLILERV 128 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + Q+ +SGI D + AR G++ E F + L++ GIG F+ L Q + Sbjct: 129 QLQQARESGIRVDDFALAQAEQGVARQNGMTLEQFYARLERDGIGKERFRAELRDQLLEQ 188 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-----RTVLFSIPDNKLQNQGFVQK 200 + + + + E +I + + ++ D + Sbjct: 189 RLREREVDARVQVSEQDIDQYLHAEPPAGAQAKPMEINLGHVLVLVPEDATPAQVAERRA 248 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF-QNLLKKSQNNTT 258 R + A E +F+ G F + + Sbjct: 249 RAQQAAERLRSGADFATVAREFSDAPEGQRAGGMLGLRPVDRYPELFVSSTRGLPVGSLV 308 Query: 259 NPYVTQKGVEYIAICDK----RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 P + G + + + + + ++ + P E AE + R Sbjct: 309 GPVRSPAGFHLLKVEQRVIAGQPATVLQSHARHILLRTGPRMSETAAAERLADYRRR 365 Score = 95.9 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 16/140 (11%), Positives = 41/140 (29%), Gaps = 3/140 (2%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238 + ++ ++ + + G + Sbjct: 338 HARHILLRTGPRMSETAAAERLADYRRRVLAGQADFAALAREHSQDDGSAKKGGDLGWAN 397 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI-ALKAYLSAQNTPTK 296 P+F+ L+ + + P VT+ GV I + ++R + K Sbjct: 398 PGQYVPEFEQALQALQPGDISAPLVTRFGVHLIELLERRQASLTAREQRDMARQAVREKK 457 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 +++ + + LR+ A + Y Sbjct: 458 LDQAYISWTQDLRARAYVEY 477 >gi|299067923|emb|CBJ39137.1| peptidyl-prolyl cis-trans isomerase (PPIase), involved in maturation of outer membrane proteins [Ralstonia solanacearum CMR15] Length = 496 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 96/304 (31%), Gaps = 21/304 (6%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRI----ALLKLQKIN----GELEKIAVQEL 80 S + + +N ++IT ++ R L+ Q +L +++L Sbjct: 77 TASSAARSQLVDEVVAVVNTDIITRRELLDRADLVERTLQSQNRQIPARPDLLGEVLEQL 136 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I+E ++ Q ++SGI V+ A+ LS S L + G+ + +++ L Sbjct: 137 ILERVQAQTAKESGIRVSDADVDRAVESVAQRNNLSVSQLKSKLAQSGLAYDKYREDLRQ 196 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR----EYLIRTVLFSIPDNKLQNQG 196 + + + + K + EI + EY + +L + ++ Q Sbjct: 197 EILLARLRDREVDSKVQVFDGEIDNFLAQQGGSAASGGALEYNVAQILVPVAEDASAEQK 256 Query: 197 FVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + ++ + + G+ L QF N + Sbjct: 257 AAARGKAESLLKQVQGGADFAKLARDSSGAPEAAQGGELGLRPIGRLPAQFANAVVDLKP 316 Query: 255 NNTT-NPYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKIEKHEAEYVKK 307 + G + + DKR G + K ++ + PT + Sbjct: 317 GQVVDQVIESPAGFHVLKLVDKRAQGTAVTAKVAQTQVRHILIKTGPTMSADDARRQLAG 376 Query: 308 LRSN 311 LR Sbjct: 377 LRDR 380 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 20/178 (11%), Positives = 64/178 (35%), Gaps = 2/178 (1%) Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 VV G +++ + + +T + + I + ++ Sbjct: 313 DLKPGQVVDQVIESPAGFHVLKLVDKRAQGTAVTAKVAQTQVRHILIKTGPTMSADDARR 372 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 ++ + + + +++ + G+ ++ L P+F+ + + Sbjct: 373 QLAGLRDRIVHGYDFGDAARRYSQDNSASAGGELGWVSPGQLVPEFEQAMGLLKPGEVSQ 432 Query: 260 PYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P +Q G+ I + +R+ + + Y + K++ +++++LR +A + Y Sbjct: 433 PVQSQFGLHLIQVEGRREAEVPVDRQRDYARSVIREQKVQAAYEDWLRQLRDSAHVEY 490 >gi|221211271|ref|ZP_03584250.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Burkholderia multivorans CGD1] gi|221168632|gb|EEE01100.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Burkholderia multivorans CGD1] Length = 453 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 101/306 (33%), Gaps = 24/306 (7%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVE 83 + ++ + +N +VIT ++ +R+ L+ + L + ++++E Sbjct: 34 GSQGAQLADEVVAVVNNDVITGRELDQRVGLISRRLQQQNAPVPPIDQLRAQVLNQMVLE 93 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 ++ Q+ + GI D TV + A+ G++ + + S L+ QG+ + F + + Sbjct: 94 RIQVQKAKDDGIRVDDATVQATLQRLAQANGMTLDQYRSRLEAQGVPWSIFTADARTELM 153 Query: 144 WPDVVKNDFMLKYGNLEMEIPAN----KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + K + E+ + + + + + + Q Sbjct: 154 LSKLREREVDSKITVSDAEVASYIASQRGPNASQQQDLRFQHIFIKAPTNAPQTQIEAAQ 213 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 K+ + + + + G + S L + K + N Sbjct: 214 KKAEALLQQATSGADFEKLAKNNSEADDAKKGGDLGFKSPSALPADVVDAAAKLRPGQVN 273 Query: 260 P--YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLR 309 P G E I + D+R G A ++ + K E + + +R Sbjct: 274 PTLIRVPDGFEIIRLVDRRQSQGATAAAPKIVQTHVRHILLRVGEGKSEGQARQQLIDIR 333 Query: 310 SNAIIH 315 I Sbjct: 334 RQ--IE 337 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 31/285 (10%), Positives = 86/285 (30%), Gaps = 18/285 (6%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIV--------ETLKKQEIEKSGITFDS 99 IT D + + N ++ + I +T + +K+ Sbjct: 163 DSKITVSDAEVASYIASQRGPNASQQQDLRFQHIFIKAPTNAPQTQIEAAQKKAEALLQQ 222 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD------NHFKQYLAIQSIWPDVVKNDFM 153 T F + A+N + + L + P +++ Sbjct: 223 ATSGADFEKLAKNNSEADDAKKGGDLGFKSPSALPADVVDAAAKLRPGQVNPTLIR--VP 280 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + + + Q + + + +++G ++++ D Sbjct: 281 DGFEIIRLVDRRQSQGATAAAPKIVQTHVRHILLRVGEGKSEGQARQQLIDIRRQIEAGG 340 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 ++ G ++ + P+F+ + + P T+ G I + Sbjct: 341 DFEKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNALQDGQISQPIRTEYGYHLIQV 400 Query: 273 CDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R+ G + + + K E+ A+++++LR ++ + Y Sbjct: 401 VGRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSYVQY 445 >gi|218661101|ref|ZP_03517031.1| peptidyl-prolyl cis-trans isomerase protein [Rhizobium etli IE4771] Length = 295 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 10/295 (3%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + +S ++ +NG IT GD++KR A L+LQ + K A ++LI ETLK+QE Sbjct: 2 MGLAGPALAASEVQAVVNGTAITSGDVAKRQAFLRLQHTKADA-KTAKEQLIDETLKRQE 60 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 + + ++ V+ F + + LS E S LD+ G+G +HFK ++A+Q WP VV Sbjct: 61 VARVRMSVSQQDVDASFARFSAGNKLSVEQMSQILDRAGVGVDHFKGFIAVQMSWPRVVN 120 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + ++ + + + + KR +AE SR Sbjct: 121 ARYGSTSRLSNYDLVSRMMQNNKQKPVTTEYMLQQIIFVIPQAKRAAITGKRKGEAEASR 180 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 + P ++ + FA+ + DV++ +L ++ P ++ L+++++ NTT VT KGVEY Sbjct: 181 SKFPGC-DQSKVFAATMRDVAVRDLGRMLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEY 239 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKI--------EKHEAEYVKKLRSNAIIHY 316 +AIC +R + + A + ++ ++ +Y+ +LR A I Y Sbjct: 240 LAICSQRQVSDDQAAEMVFRQEDLDKSKAGKNGPPENENSKKYLDELRKKAQIAY 294 >gi|251767814|ref|ZP_02268497.2| putative survival protein SurA [Burkholderia mallei PRL-20] gi|254360242|ref|ZP_04976512.1| putative survival protein SurA [Burkholderia mallei 2002721280] gi|148029482|gb|EDK87387.1| putative survival protein SurA [Burkholderia mallei 2002721280] gi|243061646|gb|EES43832.1| putative survival protein SurA [Burkholderia mallei PRL-20] Length = 450 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 113/337 (33%), Gaps = 31/337 (9%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAM-------SSRIRTTINGEVITDGDISKRI 60 ++ ++ L+ I S + A+ + + +N +VIT ++ +R+ Sbjct: 2 AMKKTLRFAAVASGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRV 61 Query: 61 ALLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 L+ + +L + ++++E ++ Q + GI D+ TV + A+ Sbjct: 62 GLIARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQA 121 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK- 171 G+ + + + ++ QG+ + F + + + + + + K + E+ + + Sbjct: 122 NGMQLDQYKARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRG 181 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFV----QKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + +R + Q + +K +++ + + Sbjct: 182 PNAGSQQDLRLEHIFVKAPANAPQADIDVAQKKAEGLLQQALASGANFERLAKNQSEADD 241 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKR----DLGGE 281 G + + L + + K + NP G E + + ++R Sbjct: 242 AKKGGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVERRASQNPAASP 301 Query: 282 IALKAYLSAQNT---PTKIEKHEAEYVKKLRSNAIIH 315 ++ ++ K E + + +R I Sbjct: 302 KIVQTHVRHILLRVGEGKSESQARQQLIDIRRQ--IE 336 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 16/156 (10%), Positives = 54/156 (34%), Gaps = 2/156 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + + + + +++ ++++ D + Sbjct: 289 VERRASQNPAASPKIVQTHVRHILLRVGEGKSESQARQQLIDIRRQIESGGDFEKFARTY 348 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G ++ + P+F+ + +NP T+ G I + +RD G Sbjct: 349 SQDGSASQGGDLGWISPGEPVPEFERAMNTLQDGQVSNPVRTEYGYHLIQVLGRRDAEGS 408 Query: 282 IALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + K E+ ++++++LR ++ + Sbjct: 409 VQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQI 444 >gi|121956451|sp|Q8Y220|SURA_RALSO RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor Length = 496 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 95/304 (31%), Gaps = 21/304 (6%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRI----ALLKLQKINGELEK----IAVQEL 80 + + +N ++IT ++ R L+ Q + +++L Sbjct: 77 TASGAARSQLVDEVVAVVNTDIITRRELLDRADLVERTLQSQNRQVPVRADLLGEVLEQL 136 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I+E ++ Q ++SGI V+ A+ LS S L + G+ + +++ L Sbjct: 137 ILERVQAQTAKESGIRVSDADVDRAVESVAQRNNLSVSQLKSKLAQSGLAYDKYREDLRQ 196 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV----REYLIRTVLFSIPDNKLQNQG 196 + + + + K + EI + +EY + +L + ++ Q Sbjct: 197 EILLARLRDREVDSKVQVFDGEIDNFLAQQGGSAASSGVQEYNVAQILVPVAEDASAEQK 256 Query: 197 FVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + ++ + + G+ L QF N + Sbjct: 257 AAARGKAESLLKQVQGGADFAKLARDSSGAPEAAQGGELGLRPIGRLPAQFANAVVDLKP 316 Query: 255 NNTT-NPYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKIEKHEAEYVKK 307 + G + + DKR G I K ++ + PT + Sbjct: 317 GQVVDQVIESPAGFHVLKLVDKRAQGTAITAKVAQTQVRHILIKTGPTMSADDARRQLAG 376 Query: 308 LRSN 311 LR Sbjct: 377 LRDR 380 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 21/178 (11%), Positives = 64/178 (35%), Gaps = 2/178 (1%) Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 VV G +++ + + IT + + I + ++ Sbjct: 313 DLKPGQVVDQVIESPAGFHVLKLVDKRAQGTAITAKVAQTQVRHILIKTGPTMSADDARR 372 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 ++ + + + +++ + G+ ++ L P+F+ + + Sbjct: 373 QLAGLRDRIVHGYDFGDAARRYSQDTSASAGGELGWVSPGQLVPEFEQAMGLLKPGEVSQ 432 Query: 260 PYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P +Q G+ I + +R+ + + Y + K++ +++++LR +A + Y Sbjct: 433 PVQSQFGLHLIQVEGRREAEVPVDRQRDYARSVIREQKVQAAYEDWLRQLRDSAHVEY 490 >gi|17545235|ref|NP_518637.1| peptidyl-prolyl cis-trans isomerase [Ralstonia solanacearum GMI1000] gi|17427526|emb|CAD14044.1| probable peptidyl-prolyl cis-trans isomerase (rotamase c) protein [Ralstonia solanacearum GMI1000] Length = 498 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 95/304 (31%), Gaps = 21/304 (6%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRI----ALLKLQKINGELEK----IAVQEL 80 + + +N ++IT ++ R L+ Q + +++L Sbjct: 79 TASGAARSQLVDEVVAVVNTDIITRRELLDRADLVERTLQSQNRQVPVRADLLGEVLEQL 138 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I+E ++ Q ++SGI V+ A+ LS S L + G+ + +++ L Sbjct: 139 ILERVQAQTAKESGIRVSDADVDRAVESVAQRNNLSVSQLKSKLAQSGLAYDKYREDLRQ 198 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV----REYLIRTVLFSIPDNKLQNQG 196 + + + + K + EI + +EY + +L + ++ Q Sbjct: 199 EILLARLRDREVDSKVQVFDGEIDNFLAQQGGSAASSGVQEYNVAQILVPVAEDASAEQK 258 Query: 197 FVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + ++ + + G+ L QF N + Sbjct: 259 AAARGKAESLLKQVQGGADFAKLARDSSGAPEAAQGGELGLRPIGRLPAQFANAVVDLKP 318 Query: 255 NNTT-NPYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKIEKHEAEYVKK 307 + G + + DKR G I K ++ + PT + Sbjct: 319 GQVVDQVIESPAGFHVLKLVDKRAQGTAITAKVAQTQVRHILIKTGPTMSADDARRQLAG 378 Query: 308 LRSN 311 LR Sbjct: 379 LRDR 382 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 21/178 (11%), Positives = 64/178 (35%), Gaps = 2/178 (1%) Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 VV G +++ + + IT + + I + ++ Sbjct: 315 DLKPGQVVDQVIESPAGFHVLKLVDKRAQGTAITAKVAQTQVRHILIKTGPTMSADDARR 374 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 ++ + + + +++ + G+ ++ L P+F+ + + Sbjct: 375 QLAGLRDRIVHGYDFGDAARRYSQDTSASAGGELGWVSPGQLVPEFEQAMGLLKPGEVSQ 434 Query: 260 PYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P +Q G+ I + +R+ + + Y + K++ +++++LR +A + Y Sbjct: 435 PVQSQFGLHLIQVEGRREAEVPVDRQRDYARSVIREQKVQAAYEDWLRQLRDSAHVEY 492 >gi|120613390|ref|YP_973068.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli AAC00-1] gi|120591854|gb|ABM35294.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli AAC00-1] Length = 476 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 95/273 (34%), Gaps = 16/273 (5%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEKIAVQELIVETLKKQE 89 + I +N E IT+ ++ R+A ++ Q + + ++ LI E ++ Q Sbjct: 68 QADYIVAVVNTEPITNNEVQARVARVEHQLAAQGGERPPRRVIAREVLERLINEKIQVQM 127 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 +SGI D V+ AR +S + L GI F+ L Q + + + Sbjct: 128 ATESGIKVDDYAVSQAEQSVARQNSVSIPEMHRRLAADGISPERFRSELRNQLLIQRLRE 187 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIR-----TVLFSIPDNKLQNQGFVQKRIKD 204 D + ++++ + + + + +L S+P+N +++ Sbjct: 188 RDVESRVRVSDLDVDQYMRDQQQSAMSDPSKIELNLGHILVSVPENASPEVVEQRRQRAQ 247 Query: 205 AEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYV 262 R+R +D K + + G+ F + + + P Sbjct: 248 QAADRVRAGEDFAKVARDLSDAPEAPTGGELGLRPADRYPDLFLRTVQQVPVGGIAGPVR 307 Query: 263 TQKGVEYIAICDK-RDLGGEIALKAYLSAQNTP 294 + G + + ++ R AL+ ++ Sbjct: 308 SPAGFHVLRVIERSRAGIPATALQNHVRHILLR 340 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 14/106 (13%), Positives = 37/106 (34%), Gaps = 2/106 (1%) Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + + G + P+F+ + + + P V++ GV I Sbjct: 366 ADFATLAREHSQDGSAKQGGDLGWAGPGRYVPEFEEAVDALKPDEISQPVVSRFGVHLIQ 425 Query: 272 ICDKRDLGGEI-ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++R+ + + K+E+ + ++ R+ A + Y Sbjct: 426 LLERREAKLTQREQRDMVRDAVREKKLEEAFTNWAQEARARAYVEY 471 >gi|114328860|ref|YP_746017.1| peptidyl-prolyl cis-trans isomerase [Granulibacter bethesdensis CGDNIH1] gi|114317034|gb|ABI63094.1| peptidyl-prolyl cis-trans isomerase [Granulibacter bethesdensis CGDNIH1] Length = 468 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 94/267 (35%), Gaps = 9/267 (3%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK-------IAVQELIVET 84 + S + I +NG+VI+ GD+ R L + ++ +++L+ E Sbjct: 62 APASSPDETSIVAVVNGDVISKGDVDARRRLFAMSTGLPMSKEVLDRLTPQVLRQLVDEK 121 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 L+ QEI++ GI + + + + G+ + L G+ + +Q W Sbjct: 122 LRLQEIQRRGIVITDSDIAHSIQGMEQRNGMQPDALRHKLAADGVSMRTLIDQIRVQLGW 181 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 V++ + + EI ++ + + + + +F D+ + Q Sbjct: 182 TRVLRQQLGERVRISDKEIQDEEELLASQKGQTEYRVSEIFIPVDDPSRAQAAHDFADT- 240 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVT 263 + +F+ + G ++ + L L + +NP Sbjct: 241 VIQQLRSGAPFPVVAAQFSQSQTALEGGDLGWVQPNQLDPQVVSVLKEMPPGAISNPIDV 300 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSA 290 G+E +A+ KR +G + + Sbjct: 301 AGGIEIVALRGKRIIGNDQGTALSIRQ 327 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 30/255 (11%), Positives = 69/255 (27%), Gaps = 4/255 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I+D +I LL QK E + + + + Q T + Sbjct: 195 ISDKEIQDEEELLASQKGQTEYRVSEIFIPVDDPSRAQAAHDFADTVIQQLRSGAPFPVV 254 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS--IWPDVVKNDFMLKYGNLEMEIPANKQ 168 ++ D + N + + P + N + G + + + Sbjct: 255 AAQFSQSQTALEGGDLGWVQPNQLDPQVVSVLKEMPPGAISNPIDVAGGIEIVALRGKRI 314 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + + Q++ + ++ DC +E + + Sbjct: 315 IGNDQGTALSIRQVFYPFTTPLNPAAPTDQQRKTLEHAKAAAAAMHDCAAVEAASKAMGG 374 Query: 229 VSIGKAQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286 L + L + P V+Q G+ + +C + + K Sbjct: 375 SRPSDPGELRLESINPPQFRALLASLPVGQPSQPIVSQDGIAIMMVCSRTQKNFGLPGKE 434 Query: 287 YLSAQNTPTKIEKHE 301 +S Q ++E Sbjct: 435 DISNQILGERVETAS 449 >gi|53725016|ref|YP_102044.1| survival protein SurA [Burkholderia mallei ATCC 23344] gi|67641452|ref|ZP_00440230.1| chaperone SurA [Burkholderia mallei GB8 horse 4] gi|121598370|ref|YP_994032.1| putative survival protein SurA [Burkholderia mallei SAVP1] gi|124385555|ref|YP_001028304.1| putative survival protein SurA [Burkholderia mallei NCTC 10229] gi|126449043|ref|YP_001081948.1| putative survival protein SurA [Burkholderia mallei NCTC 10247] gi|254176840|ref|ZP_04883497.1| putative survival protein SurA [Burkholderia mallei ATCC 10399] gi|254203730|ref|ZP_04910090.1| putative survival protein SurA [Burkholderia mallei FMH] gi|254208705|ref|ZP_04915053.1| putative survival protein SurA [Burkholderia mallei JHU] gi|81685183|sp|Q62MM4|SURA_BURMA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|52428439|gb|AAU49032.1| survival protein SurA, putative [Burkholderia mallei ATCC 23344] gi|121227180|gb|ABM49698.1| putative survival protein SurA [Burkholderia mallei SAVP1] gi|124293575|gb|ABN02844.1| putative survival protein SurA [Burkholderia mallei NCTC 10229] gi|126241913|gb|ABO05006.1| putative survival protein SurA [Burkholderia mallei NCTC 10247] gi|147745242|gb|EDK52322.1| putative survival protein SurA [Burkholderia mallei FMH] gi|147750581|gb|EDK57650.1| putative survival protein SurA [Burkholderia mallei JHU] gi|160697881|gb|EDP87851.1| putative survival protein SurA [Burkholderia mallei ATCC 10399] gi|238522391|gb|EEP85835.1| chaperone SurA [Burkholderia mallei GB8 horse 4] Length = 448 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 112/336 (33%), Gaps = 31/336 (9%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAM-------SSRIRTTINGEVITDGDISKRIA 61 + ++ L+ I S + A+ + + +N +VIT ++ +R+ Sbjct: 1 MKKTLRFAAVASGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVG 60 Query: 62 LLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 L+ + +L + ++++E ++ Q + GI D+ TV + A+ Sbjct: 61 LIARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQAN 120 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-N 172 G+ + + + ++ QG+ + F + + + + + + K + E+ + + Sbjct: 121 GMQLDQYKARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGP 180 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFV----QKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + +R + Q + +K +++ + + Sbjct: 181 NAGSQQDLRLEHIFVKAPANAPQADIDVAQKKAEGLLQQALASGANFERLAKNQSEADDA 240 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKR----DLGGEI 282 G + + L + + K + NP G E + + ++R Sbjct: 241 KKGGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVERRASQNPAASPK 300 Query: 283 ALKAYLSAQNT---PTKIEKHEAEYVKKLRSNAIIH 315 ++ ++ K E + + +R I Sbjct: 301 IVQTHVRHILLRVGEGKSESQARQQLIDIRRQ--IE 334 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 16/156 (10%), Positives = 54/156 (34%), Gaps = 2/156 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + + + + +++ ++++ D + Sbjct: 287 VERRASQNPAASPKIVQTHVRHILLRVGEGKSESQARQQLIDIRRQIESGGDFEKFARTY 346 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G ++ + P+F+ + +NP T+ G I + +RD G Sbjct: 347 SQDGSASQGGDLGWISPGEPVPEFERAMNTLQDGQVSNPVRTEYGYHLIQVLGRRDAEGS 406 Query: 282 IALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + K E+ ++++++LR ++ + Sbjct: 407 VQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQI 442 >gi|149186120|ref|ZP_01864434.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Erythrobacter sp. SD-21] gi|148830151|gb|EDL48588.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Erythrobacter sp. SD-21] Length = 448 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 88/279 (31%), Gaps = 11/279 (3%) Query: 44 TTINGEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETLKKQEIEKSGIT 96 +NG VIT D+ +R+ALL + ++ LI ETL+ Q E I Sbjct: 59 AVVNGYVITGTDLDQRLALLVNANQTEIPAEELQRVRAQVLRNLIDETLQIQAAEAEEIV 118 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 V F + A ED ++L G K+ + + W +++ Sbjct: 119 ISDAEVEQTFARVAAQNNQRPEDMENYLASIGSSSASLKRQIRGELAWQRLLRQKVSFFV 178 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 E+ ++++ + + +N VQ + E + Sbjct: 179 NVSAEEVNELMERLEAAKGTDEYWLWEI--FMSATPENDAAVQANAQKIMEQLRQGGSFV 236 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274 +F+ G ++ + L + + P G + + D Sbjct: 237 AYARQFSEASTAAVGGDLDWIHLAQLGDPQLETVVAQMEAGQLVGPIKIPGGYWIVYLRD 296 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 KR + A LS + + A V K + +A Sbjct: 297 KRQVLMADPRDAMLSLKQIQIDFDPAAAPEVNKQKLDAF 335 Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 3/83 (3%) Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVT-QKGVEYIAICDKRDLGGEI-ALKAYLSAQNT 293 + L Q QN++ TT P+ + ++GV + +C + D L AQ Sbjct: 365 IRARALPEQLQNIMLSLQIGETTPPFGSLEEGVRVLMLCGRDDPESSEGPNFDELMAQIE 424 Query: 294 PTKIEKHEAEYVKKLRSNAIIHY 316 +I K Y++ LR++A I Y Sbjct: 425 DERINKAAQRYLRDLRNDAYIEY 447 >gi|301059205|ref|ZP_07200143.1| SurA N-terminal domain protein [delta proteobacterium NaphS2] gi|300446695|gb|EFK10522.1| SurA N-terminal domain protein [delta proteobacterium NaphS2] Length = 324 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 121/319 (37%), Gaps = 20/319 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMS----SRIRTTINGEVITDGDISKRIALL------- 63 + + +++F V ++ + +R+ +N +V+T +++ R+ + Sbjct: 1 MRKSTIFVLMFLFVGANAFLQGKANGEIYNRVVAIVNADVVTLYELNTRLTQMTGMAPDA 60 Query: 64 ---KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 K + E+ + ++ LI E + ++I++ I + V+ R ++ ED Sbjct: 61 LKRKSESQYLEMRRKVLEMLIEEKIAIEKIKEMKINVPQSEVDAAIETLKRENDMTQEDL 120 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + L QG+ + +++ L + ++ + K + E+ A K+ + + Sbjct: 121 VAGLKAQGLSLDEYRKRLKTELERRRLINYEVRSKIIITDEEVQAYYDTHKDNYSTKGKV 180 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYL 237 + + N+ + + A++ ++ N +F++ G Sbjct: 181 HLAMIFLKQEDPGNREEARALRRKADQIIGKIKAGENFGTLAAQFSNGPGAKDGGDLGVF 240 Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTP 294 S+L+ + +K S P V G++ I + +K + +K + + Sbjct: 241 NISELNSEMAASIKDLSSGEIGTPIVRPNGIQIIKVVEKDEGGEKSFEKVKNAIRSTLYR 300 Query: 295 TKIEKHEAEYVKKLRSNAI 313 K+ + ++K LR + Sbjct: 301 EKMNQAYDAWIKDLREKSY 319 >gi|126441500|ref|YP_001057745.1| putative survival protein SurA [Burkholderia pseudomallei 668] gi|134279812|ref|ZP_01766524.1| putative survival protein SurA [Burkholderia pseudomallei 305] gi|217419752|ref|ZP_03451258.1| putative chaperone surA [Burkholderia pseudomallei 576] gi|226830776|ref|YP_001064989.2| putative survival protein SurA [Burkholderia pseudomallei 1106a] gi|237810895|ref|YP_002895346.1| chaperone SurA [Burkholderia pseudomallei MSHR346] gi|254258573|ref|ZP_04949627.1| putative chaperone surA [Burkholderia pseudomallei 1710a] gi|126220993|gb|ABN84499.1| putative chaperone surA [Burkholderia pseudomallei 668] gi|134249012|gb|EBA49094.1| putative survival protein SurA [Burkholderia pseudomallei 305] gi|210148311|gb|ABN91359.2| putative chaperone SurA [Burkholderia pseudomallei 1106a] gi|217397056|gb|EEC37072.1| putative chaperone surA [Burkholderia pseudomallei 576] gi|237504702|gb|ACQ97020.1| chaperone SurA [Burkholderia pseudomallei MSHR346] gi|254217262|gb|EET06646.1| putative chaperone surA [Burkholderia pseudomallei 1710a] Length = 450 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 113/337 (33%), Gaps = 31/337 (9%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAM-------SSRIRTTINGEVITDGDISKRI 60 ++ ++ L+ I S + A+ + + +N +VIT ++ +R+ Sbjct: 2 AMKKTLRFAAVASGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRV 61 Query: 61 ALLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 L+ + +L + ++++E ++ Q + GI D+ TV + A+ Sbjct: 62 GLIARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQA 121 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK- 171 G+ + + + ++ QG+ + F + + + + + + K + E+ + + Sbjct: 122 NGMQLDQYKARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRG 181 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFV----QKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + +R + Q + +K +++ + + Sbjct: 182 PNAGSQQDLRLEHIFVKAPANAPQADIDVAQKKAEGLLQQALASGANFERLAKNQSEADD 241 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKR----DLGGE 281 G + + L + + K + NP G E + + ++R Sbjct: 242 AKKGGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVERRASQNPAASP 301 Query: 282 IALKAYLSAQNT---PTKIEKHEAEYVKKLRSNAIIH 315 ++ ++ K E + + +R I Sbjct: 302 KIVQTHVRHILLRVGEGKSESQARQQLIDIRRQ--IE 336 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 16/156 (10%), Positives = 54/156 (34%), Gaps = 2/156 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + + + + +++ ++++ D + Sbjct: 289 VERRASQNPAASPKIVQTHVRHILLRVGEGKSESQARQQLIDIRRQIESGGDFEKFARTY 348 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G ++ + P+F+ + +NP T+ G I + +RD G Sbjct: 349 SQDGSASQGGDLGWISPGETVPEFERAMNTLQDGQVSNPVRTEYGYHLIQVLGRRDAEGS 408 Query: 282 IALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + K E+ ++++++LR ++ + Sbjct: 409 VQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQI 444 >gi|76810003|ref|YP_332285.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei 1710b] gi|167718164|ref|ZP_02401400.1| putative survival protein SurA [Burkholderia pseudomallei DM98] gi|167737195|ref|ZP_02409969.1| putative survival protein SurA [Burkholderia pseudomallei 14] gi|167822803|ref|ZP_02454274.1| putative survival protein SurA [Burkholderia pseudomallei 9] gi|167844378|ref|ZP_02469886.1| putative survival protein SurA [Burkholderia pseudomallei B7210] gi|167901377|ref|ZP_02488582.1| putative survival protein SurA [Burkholderia pseudomallei NCTC 13177] gi|167909606|ref|ZP_02496697.1| putative survival protein SurA [Burkholderia pseudomallei 112] gi|167917621|ref|ZP_02504712.1| putative survival protein SurA [Burkholderia pseudomallei BCC215] gi|226196777|ref|ZP_03792357.1| putative chaperone surA [Burkholderia pseudomallei Pakistan 9] gi|242314929|ref|ZP_04813945.1| putative chaperone surA [Burkholderia pseudomallei 1106b] gi|254181756|ref|ZP_04888353.1| putative survival protein SurA [Burkholderia pseudomallei 1655] gi|254196558|ref|ZP_04902982.1| putative survival protein SurA [Burkholderia pseudomallei S13] gi|254296203|ref|ZP_04963660.1| putative survival protein SurA [Burkholderia pseudomallei 406e] gi|122070636|sp|Q3JVW8|SURA_BURP1 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|76579456|gb|ABA48931.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei 1710b] gi|157805631|gb|EDO82801.1| putative survival protein SurA [Burkholderia pseudomallei 406e] gi|169653301|gb|EDS85994.1| putative survival protein SurA [Burkholderia pseudomallei S13] gi|184212294|gb|EDU09337.1| putative survival protein SurA [Burkholderia pseudomallei 1655] gi|225931308|gb|EEH27315.1| putative chaperone surA [Burkholderia pseudomallei Pakistan 9] gi|242138168|gb|EES24570.1| putative chaperone surA [Burkholderia pseudomallei 1106b] Length = 448 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 112/336 (33%), Gaps = 31/336 (9%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAM-------SSRIRTTINGEVITDGDISKRIA 61 + ++ L+ I S + A+ + + +N +VIT ++ +R+ Sbjct: 1 MKKTLRFAAVASGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVG 60 Query: 62 LLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 L+ + +L + ++++E ++ Q + GI D+ TV + A+ Sbjct: 61 LIARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQAN 120 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-N 172 G+ + + + ++ QG+ + F + + + + + + K + E+ + + Sbjct: 121 GMQLDQYKARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGP 180 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFV----QKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + +R + Q + +K +++ + + Sbjct: 181 NAGSQQDLRLEHIFVKAPANAPQADIDVAQKKAEGLLQQALASGANFERLAKNQSEADDA 240 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKR----DLGGEI 282 G + + L + + K + NP G E + + ++R Sbjct: 241 KKGGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVERRASQNPAASPK 300 Query: 283 ALKAYLSAQNT---PTKIEKHEAEYVKKLRSNAIIH 315 ++ ++ K E + + +R I Sbjct: 301 IVQTHVRHILLRVGEGKSESQARQQLIDIRRQ--IE 334 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 16/156 (10%), Positives = 54/156 (34%), Gaps = 2/156 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + + + + +++ ++++ D + Sbjct: 287 VERRASQNPAASPKIVQTHVRHILLRVGEGKSESQARQQLIDIRRQIESGGDFEKFARTY 346 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G ++ + P+F+ + +NP T+ G I + +RD G Sbjct: 347 SQDGSASQGGDLGWISPGETVPEFERAMNTLQDGQVSNPVRTEYGYHLIQVLGRRDAEGS 406 Query: 282 IALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + K E+ ++++++LR ++ + Sbjct: 407 VQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQI 442 >gi|167892891|ref|ZP_02480293.1| putative survival protein SurA [Burkholderia pseudomallei 7894] gi|254187685|ref|ZP_04894197.1| putative survival protein SurA [Burkholderia pseudomallei Pasteur 52237] gi|157935365|gb|EDO91035.1| putative survival protein SurA [Burkholderia pseudomallei Pasteur 52237] Length = 448 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 112/336 (33%), Gaps = 31/336 (9%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAM-------SSRIRTTINGEVITDGDISKRIA 61 + ++ L+ I S + A+ + + +N +VIT ++ +R+ Sbjct: 1 MKKTLRFAAAASGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVG 60 Query: 62 LLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 L+ + +L + ++++E ++ Q + GI D+ TV + A+ Sbjct: 61 LIARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQAN 120 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-N 172 G+ + + + ++ QG+ + F + + + + + + K + E+ + + Sbjct: 121 GMQLDQYKARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGP 180 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFV----QKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + +R + Q + +K +++ + + Sbjct: 181 NAGSQQDLRLEHIFVKAPANAPQADIDVAQKKAEGLLQQALASGANFERLAKNQSEADDA 240 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKR----DLGGEI 282 G + + L + + K + NP G E + + ++R Sbjct: 241 KKGGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVERRASQNPAASPK 300 Query: 283 ALKAYLSAQNT---PTKIEKHEAEYVKKLRSNAIIH 315 ++ ++ K E + + +R I Sbjct: 301 IVQTHVRHILLRVGEGKSESQARQQLIDIRRQ--IE 334 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 16/156 (10%), Positives = 54/156 (34%), Gaps = 2/156 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + + + + +++ ++++ D + Sbjct: 287 VERRASQNPAASPKIVQTHVRHILLRVGEGKSESQARQQLIDIRRQIESGGDFEKFARTY 346 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G ++ + P+F+ + +NP T+ G I + +RD G Sbjct: 347 SQDGSASQGGDLGWISPGETVPEFERAMNTLQDGQVSNPVRTEYGYHLIQVLGRRDAEGS 406 Query: 282 IALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + K E+ ++++++LR ++ + Sbjct: 407 VQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQI 442 >gi|148264649|ref|YP_001231355.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter uraniireducens Rf4] gi|146398149|gb|ABQ26782.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter uraniireducens Rf4] Length = 326 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 84/286 (29%), Gaps = 14/286 (4%) Query: 44 TTINGEVITDGDISKRIALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGI 95 +NG I+ + + + LK + E+++ A+ LI L QE K GI Sbjct: 37 AVVNGAPISREECNGELERLKRSRSVRLFSPALLKEIQQEALDNLIRRELIYQESRKGGI 96 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + V+ + E S+ + + F + Sbjct: 97 GVAATAVDEELARLKTRFANEMEFSSALSSLHVSEASLRNIVER-GIAVRTYIDRQFAGQ 155 Query: 156 YGNLEMEIPANKQKMKNITVREYLIR--TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E + + R +R +L + + +K+I+ E + Sbjct: 156 STVTDEEKKGYYRSHPDTFKRPLQVRISHILVRTGGMTGKARAEAEKKIEGIREKVGKGE 215 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 ++ G + ++ ++ + T+ + G+ I + Sbjct: 216 SFDALARAYSECGSKEQGGDLGFFRRGEMARVVEDAVMDLKVGETSGIVEDRFGLHLIRL 275 Query: 273 CDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 D++ A + +S K + Y LR A + Sbjct: 276 TDRKPEQVIAYEAAEGKISEYLKQEKAMEKANRYAGDLRKKARVEI 321 >gi|190891133|ref|YP_001977675.1| peptidyl-prolyl cis-trans isomerase [Rhizobium etli CIAT 652] gi|218517103|ref|ZP_03513943.1| probable peptidyl-prolyl cis-trans isomerase protein [Rhizobium etli 8C-3] gi|190696412|gb|ACE90497.1| probable peptidyl-prolyl cis-trans isomerase protein [Rhizobium etli CIAT 652] Length = 314 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 76/287 (26%), Positives = 137/287 (47%), Gaps = 10/287 (3%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 +S ++ +NG IT GD++KR A L+LQ + K A ++LI ETLK+QE+ + ++ Sbjct: 29 AASEVQAVVNGTAITSGDVAKRQAFLRLQHTAADA-KTAKEQLIDETLKRQEVARVHMSV 87 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 V+ F + + LS S LD+ G+G +HFK ++A+Q WP VV + Sbjct: 88 SQQDVDASFARFSAGNKLSVAQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARYGSTSR 147 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 ++ + + + + KR +AE SR + P + Sbjct: 148 LSNYDLVSRMMQNNKQKPVTTEYMLQQIIFVIPEAKRGAITGKRKGEAEASRSKFPGC-D 206 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + FA+ + DV++ +L ++ P ++ L+++++ NTT VT KGVEY+AIC +R Sbjct: 207 QAKVFAATMRDVAVRDLGRMLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAICSQRQ 266 Query: 278 LGGEIALKAYLSAQNTPTKI--------EKHEAEYVKKLRSNAIIHY 316 + + A + ++ + +Y+ +LR A I Y Sbjct: 267 VSDDQAAEMVFRQEDLDKSKAGKNGPPENDNSKKYLDELRKKAQIAY 313 >gi|218671035|ref|ZP_03520706.1| probable peptidyl-prolyl cis-trans isomerase protein [Rhizobium etli GR56] Length = 314 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 77/287 (26%), Positives = 139/287 (48%), Gaps = 10/287 (3%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 +S ++ +NG IT GD++KR A L+LQ + K A ++LI ETLK+QE+ + ++ Sbjct: 29 AASEVQAVVNGTAITSGDVAKRQAFLRLQHTKADA-KTAKEQLIDETLKRQEVARVRMSV 87 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 V+ F + + LS E S LD+ G+G +HFK ++A+Q WP VV + Sbjct: 88 SQQDVDASFARFSAGNKLSVEQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARYGSTSR 147 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 ++ + + + + KR +AE SR + P + Sbjct: 148 LSNYDLVSRMMQNNKQKPVTTEYMLQQIIFVIPQAKRAAITGKRKGEAEASRSKFPGC-D 206 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + FA+ + DV++ +L ++ P ++ L+++++ NTT VT KGVEY+AIC +R Sbjct: 207 QAKVFAATMRDVAVRDLGRMLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAICSQRQ 266 Query: 278 LGGEIALKAYLSAQNTPTKI--------EKHEAEYVKKLRSNAIIHY 316 + + A + ++ ++ +Y+ +LR A I Y Sbjct: 267 VSDDQAAEMVFRQEDLDKSKAAKNGPPENENSKKYLDELRKKAQIAY 313 >gi|300692473|ref|YP_003753468.1| peptidyl-prolyl cis-trans isomerase (PPIase), involved in maturation of outer membrane proteins [Ralstonia solanacearum PSI07] gi|299079533|emb|CBJ52211.1| peptidyl-prolyl cis-trans isomerase (PPIase), involved in maturation of outer membrane proteins [Ralstonia solanacearum PSI07] Length = 475 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 93/304 (30%), Gaps = 21/304 (6%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRI----ALLKLQKINGELEK----IAVQEL 80 + + +N ++IT ++ R L+ Q +++L Sbjct: 56 TASGAARSQLVDEVVAVVNTDIITRRELLDRADLVERTLQSQNRPMPARADLLGEVLEQL 115 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I+E ++ Q ++SGI V+ A+ LS S L + G+ + +++ L Sbjct: 116 ILERVQAQTAKESGIRVSDADVDRAVESVAQRNNLSVSQLKSKLVQSGLAYDKYREDLRQ 175 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT----VREYLIRTVLFSIPDNKLQNQG 196 + + + + K + EI + +EY + +L + ++ Q Sbjct: 176 EILLARLRDREVDSKVQVFDGEIDNFLAQQGGAAASGGSQEYNVAQILVPVAEDASAEQK 235 Query: 197 FVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + + + + G+ L QF N + Sbjct: 236 AAARGKAEGLLKQVQGGADFAKLARDHSGAPEAAQGGELGLRPIGRLPAQFANAVVDLKP 295 Query: 255 NNTTN-PYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKIEKHEAEYVKK 307 + G + + DKR G I K ++ + PT + Sbjct: 296 GQVVGQVIESPAGFHVLKLVDKRVQGTAITAKVAQTQVRHILIKTGPTMPADDARRQLAG 355 Query: 308 LRSN 311 LR Sbjct: 356 LRDR 359 Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 63/178 (35%), Gaps = 2/178 (1%) Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 VV G +++ + + IT + + I ++ Sbjct: 292 DLKPGQVVGQVIESPAGFHVLKLVDKRVQGTAITAKVAQTQVRHILIKTGPTMPADDARR 351 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 ++ + + + +++ + G+ ++ L P+F+ + + Sbjct: 352 QLAGLRDRIVHGYDFGDAARRYSQDASASAGGELGWVSPGQLVPEFEQAMNLLKPGEVSQ 411 Query: 260 PYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P +Q GV I + +R+ + + Y + KI+ +++++LR +A + Y Sbjct: 412 PVQSQFGVHLIQVEGRREAEVPVDRQRDYARSAIREQKIQAAYEDWLRQLRDSAHVEY 469 >gi|118581987|ref|YP_903237.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelobacter propionicus DSM 2379] gi|118504697|gb|ABL01180.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelobacter propionicus DSM 2379] Length = 300 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 88/315 (27%), Gaps = 53/315 (16%) Query: 14 KLLTTYFVLIIFCIVPIV-------SYKSWAMSSRIRTTINGEVITDGDISKRIA----L 62 + T + + C V + S + ++ +NG+ IT GD S+ + Sbjct: 3 SITRTKCIAVALCSVALFACQGTPGSSTATKQEGQVLAEVNGKKITSGDFSREVKNLPEY 62 Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 L+ + K + +++ L Q+ K G+ Sbjct: 63 LRAMATTPQGRKEMLDTMVIRELILQKASKDGLDKGPEIE-------------------- 102 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 Q L + I +K + ++ + + IR Sbjct: 103 ----------EKLQELKKRLIVEAFLKKKVETDAQISDADLKKFYDQNIDKFKAGEQIRA 152 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 +K K+ K + G + + + Sbjct: 153 SHIL---------VKTEKEAKEILAQLKGGAAFEELARKHSVDSSSAKGGDLGWFGKGAM 203 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEK 299 P F+ + ++ + G I + KR G +K + A P+K ++ Sbjct: 204 VPAFERAALALKEGQVSDVVKSDFGFHIIKLTGKRPAGTRPFDEVKDQIKAALMPSKQQE 263 Query: 300 HEAEYVKKLRSNAII 314 + +L+ +A I Sbjct: 264 IFQKIKDELKKSAKI 278 >gi|261250209|ref|ZP_05942785.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio orientalis CIP 102891] gi|260939325|gb|EEX95311.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio orientalis CIP 102891] Length = 432 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 107/313 (34%), Gaps = 12/313 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69 +K + ++ + + +N V+ DI I LK Sbjct: 1 MKFWKQTLLALMIASPINLVQAEPVALDTVAVIVNTSVVLQSDIDTSIKTLKANAKKKGQ 60 Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + ++LIV+T+++QE E+ G+ D N +N + A+N + E + + Sbjct: 61 SLPSEEILTEQVTEKLIVDTIQQQEAERLGVRIDDNRLNEAISEIAKNNQQTVEQLRASI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 +G+ F++ + + + + L E+ + + T + Sbjct: 121 ASEGLNYAEFREQIRKEIAASEARNALVRRRINILPAEVDNLSELLAQETNATVQYKIGH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + N ++ ++ + K+ + ++ + G ++ + ++ Sbjct: 181 IQLRVNDGDDKSEIEAQAKELVKELNNGADFSTMAYTYSKGPKALQGGDWGWMRKEEMPT 240 Query: 245 QFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F + +K +++ + P+ + G + I D + + ++ + T ++ Sbjct: 241 IFADQIKLQNKGSVIGPFRSGVGFHILKIEDVKGLETVAVTEVNARHILIKPTVILSDEG 300 Query: 301 EAEYVKKLRSNAI 313 + + Sbjct: 301 VKNTLNNIIRQIK 313 Score = 76.6 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 44/112 (39%), Gaps = 3/112 (2%) Query: 207 ESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQ 264 + + ++++ G+ Y P+F++ + + P+ T Sbjct: 311 QIKAGDATFGELAQQYSQDPGSAAQNGELGYQTSDLYVPEFKHQIDTLPVGQISEPFKTV 370 Query: 265 KGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 G + I D+R++ + ALK K + + +++++R++A + Sbjct: 371 HGWHIVEILDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQEIRASAYVE 422 >gi|329923149|ref|ZP_08278648.1| putative foldase protein PrsA [Paenibacillus sp. HGF5] gi|328941591|gb|EGG37877.1| putative foldase protein PrsA [Paenibacillus sp. HGF5] Length = 398 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 96/303 (31%), Gaps = 25/303 (8%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 ++ + + +V IV + + +N IT ++ + + K Sbjct: 87 MIASLVLAAALIVVLIVPPFAKGSGNEAIAKVNDVNITKDNLYDELVSVGG--------K 138 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + +I E L +QE++ IT VN + S E F+ L + G+ ++ Sbjct: 139 QTLNSMITEELIQQELKNKSITVTDADVNKEVDALKASF-PSEEQFNMALQQNGMTLDNL 197 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 K+ Q ++ K E+ + K +R + + Sbjct: 198 KEQTKTQVELKKLM----ADKIKVTGEEVKEVYDQNKESFATPEQVRASHILVETKEEAE 253 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + ++ + G + ++ P F+ K Sbjct: 254 AI---------VKQLKEGADFATIAKEKNQDATKDTGGDLNFFGRGEMDPAFEEAAFKLK 304 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ + P + G I + D+++ K + +Q K+ Y+++L+ Sbjct: 305 KDEISEPVKSSFGYHIIKVTDRKEATNPTLEDKKEEIRSQLENQKVYAESTAYIQELKDK 364 Query: 312 AII 314 A I Sbjct: 365 ATI 367 >gi|116251332|ref|YP_767170.1| hypothetical protein RL1566 [Rhizobium leguminosarum bv. viciae 3841] gi|115255980|emb|CAK07061.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 314 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 78/285 (27%), Positives = 137/285 (48%), Gaps = 10/285 (3%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 S ++ +NG IT GD++KR A L+LQ + K A ++LI E LK+QE+ + ++ Sbjct: 31 SEVKAVVNGTAITSGDVAKRQAFLRLQHTKADA-KTAEEQLIDEALKRQEVARVRMSVSQ 89 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 V+ F + + LS E S LD+ G+G +HFK ++A+Q WP VV + Sbjct: 90 QDVDASFARFSSGNKLSPEQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARYGSTSRLS 149 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 ++ + + + + KR +AE SR + P ++ Sbjct: 150 NYDLVSRMMQNNKQKPVTTEYMLQQIIFVIPQAKRGAITGKRKGEAEASRSKFPGC-DQA 208 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + FA+ + DVS+ LL ++ P ++ L+++++ NTT VT KGVEY+AIC +R + Sbjct: 209 KVFAATMRDVSVRDLGRLLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAICSQRQVS 268 Query: 280 GEIALKAYLSAQNTPTKI--------EKHEAEYVKKLRSNAIIHY 316 + A + ++ ++ +Y+ +LR A I Y Sbjct: 269 DDQAAEMVFRQEDLDKSKAGKDASPENENSKKYLDELRKKAQIAY 313 >gi|304405097|ref|ZP_07386757.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus curdlanolyticus YK9] gi|304345976|gb|EFM11810.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus curdlanolyticus YK9] Length = 365 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 104/321 (32%), Gaps = 20/321 (6%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 K +S S + + + +L+I +V +SY ++NG IT+ + + Sbjct: 28 KEKPKSSGSGALGWVVSAALLVILILVATLSYAGDDKGEN-VASVNGVAITEKQLYDALL 86 Query: 62 LLKL--QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 L+K Q ++ ++ + +LI L QE++K G+ ++ + GL E Sbjct: 87 LIKGGGQNGQQKMSEVTLDDLINVELMNQELQKQGLVVAEADIDKELDALKKAYGLDDEK 146 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 L + L ++ K + +I + K Sbjct: 147 LKQTLAQS----GMTVADLRPDLEKQAKLRKLLSSKATVTDKDIQDYYDQNKESFSTPEQ 202 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLL 238 +R + + + + ++ + + G Y Sbjct: 203 VRASHILVKTKEEADAI---------LKQLKDGADFATIAKEKSLDTGTKDAGGDLNYFG 253 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPT 295 + + P F+ + T+ P + G I + D + K + + Sbjct: 254 KGQMDPAFEKAAFELKVGETSQPVQSAYGFHIIKVTDHKQAASPTFEEKKEDIKNILMMS 313 Query: 296 KIEKHEAEYVKKLRSNAIIHY 316 KI + ++++L+S A I Sbjct: 314 KINELAQPFIEELKSKAKIEN 334 >gi|23015619|ref|ZP_00055390.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Magnetospirillum magnetotacticum MS-1] Length = 421 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 99/276 (35%), Gaps = 10/276 (3%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL-LKLQKING 70 + ++F VP+ S+ S RI +N E+I+ D+ R+ L + + + Sbjct: 1 MLARAAIVLNALLFACVPL-SWASAQDVDRIAAVVNDEIISIRDLDARLKLAITVSGLPD 59 Query: 71 ELEK------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 +E +++++ E ++ QE + ++ + V + + L Sbjct: 60 NIESRRRAVPQVLRKMVDERIQAQEAARLKVSAGTEDVARGLANVENQNRMPPGSLLTSL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 K G+ + K + IW ++ E EI + ++ + + + Sbjct: 120 AKAGVDPDAVKDQIRADIIWVKLIMRSLQPTIKVGEDEITERLETIRQQFGQPEFMLAEI 179 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 F D+ Q ++ + E +F+ + G +L S L Sbjct: 180 FLPVDSPRQE-EESKRLGERLIEQLRAGAPFQALARQFSQSGSASNGGVLGWLSPSTLED 238 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + ++ + ++ ++ T G +A+ DKR G Sbjct: 239 EVRDTVMSMNKGQVSSLIRTGSGYAILALIDKRVAG 274 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 29/276 (10%), Positives = 79/276 (28%), Gaps = 10/276 (3%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + + IT+ R+ ++ Q E + + +++E ++ G Sbjct: 151 IKVGEDEITE-----RLETIRQQFGQPEFMLAEIFLPVDSPRQEEESKRLGERLIEQLRA 205 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 Q + S+ + + + + + + K Sbjct: 206 GAPFQALARQFSQSGSASNGGVLGWLSPSTLEDEVRDTVMSMN--KGQVSSLIRTGSGYA 263 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + + ++ + K C +LE Sbjct: 264 ILALIDKRVAGETFVGDPLLSIVQVFFPIPPGAPPISQLIEKAAELTAPLKSCPELEDMG 323 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD--LGG 280 K++ G+ + S + ++L+ N + P T + + +C + + G Sbjct: 324 RKLNSEQSGRRDGVTLSVMPQNLRSLVTNLPINKASPPVSTGNALMVVMVCSRDENATKG 383 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + ++E Y++ LR A I + Sbjct: 384 GLPSRDAMRRMIEDERLELLSKRYLRDLRRAAFIDF 419 >gi|329903502|ref|ZP_08273518.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) [Oxalobacteraceae bacterium IMCC9480] gi|327548325|gb|EGF33013.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) [Oxalobacteraceae bacterium IMCC9480] Length = 475 Score = 120 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 99/302 (32%), Gaps = 24/302 (7%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVETL 85 + I +N +VIT D++ R+AL++ + LEK ++ +IV+ Sbjct: 58 SEPQVIDSIVAVVNSDVITRLDLNSRVALVETRMKQQGSQLPQRALLEKQILERMIVDRA 117 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + Q SGI D ++ + A LS +DF + L+++G + F++ + + Sbjct: 118 QLQLAADSGIKIDDVMLDRAMARLAEQNKLSMQDFRNQLEREGTPFSRFREEIREEIAMQ 177 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + + + K E E+ KN + I + + R A Sbjct: 178 RIREREVDNKLQITESEVDNYLDAEKNAPQIQPEYNLAQILIRIPENATAEQIAARRARA 237 Query: 206 EESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPY 261 ++ + ++ I + G+ + L F + + ++ + Sbjct: 238 DDVARQLRSGADFAKLAASYSDSIEALKGGELGWRTADRLPQLFVDAVARLNEGELSAVI 297 Query: 262 VTQKGVEYIAICDKRD------------LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + G + + KR + ++ + + L+ Sbjct: 298 KSASGFHILKVAGKRTRSADSSTASAAAPAVQQTRARHILIKVNTIVTAAEALRKLTDLK 357 Query: 310 SN 311 Sbjct: 358 QR 359 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 32/288 (11%), Positives = 80/288 (27%), Gaps = 18/288 (6%) Query: 46 INGE-VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 ++ + IT+ ++ + K +A Q LI + + ++ V Sbjct: 184 VDNKLQITESEVDNYLDAEKNAPQIQPEYNLA-QILIRIPENATAEQIAARRARADDVAR 242 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML---------- 154 A L+A S +G Q V + + Sbjct: 243 QLRSGADFAKLAASYSDSIEALKGGELGWRTADRLPQLFVDAVARLNEGELSAVIKSASG 302 Query: 155 ----KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 K + + + + + ++K + Sbjct: 303 FHILKVAGKRTRSADSSTASAAAPAVQQTRARHILIKVNTIVTAAEALRKLTDLKQRLDN 362 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269 + + +++ + G ++ D P+F+ + + P T G Sbjct: 363 KAATFEELAKLYSNDLSASKGGDLGWIYPGDTVPEFERAMNLLKPGEVSAPIETPFGYHL 422 Query: 270 IAICDKRDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + +++ K K+E+ +++++LR A + Y Sbjct: 423 IEVIERKSQDVSQERKRLSARQALRERKLEEATQDWIRQLRDRAYVEY 470 >gi|21675072|ref|NP_663137.1| peptidyl-prolyl cis-trans isomerase SurA [Chlorobium tepidum TLS] gi|21648311|gb|AAM73479.1| peptidyl-prolyl cis-trans isomerase SurA [Chlorobium tepidum TLS] Length = 438 Score = 120 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 101/310 (32%), Gaps = 15/310 (4%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN---- 69 K+L ++ + + RI + E+I D++++ +L LQ Sbjct: 3 KVLFAVLAALMIAMNGFADAAASTGLDRIVAIVGNEIILASDVNEQELMLHLQYPETRKD 62 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 +L K ++ +I + + + + + D +V+ + S+ + G+ Sbjct: 63 PQLRKRILENMINQKIILTKAKIDTVKVDEKSVDDQAAARYSSLRAGFPSVSAMESRFGM 122 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLK-----YGNLEMEIPANKQKMKNITVREYLIRTVL 184 N KQ++ +++ E N++K E + + + Sbjct: 123 PVNRLKQHIREDIRDQQMIEAFRRKNFHEVTVSYDETMAFYNQEKGALPEAPETVSVSQI 182 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLH 243 +P + +IK ++ +++ G + + +L Sbjct: 183 IKMPLVSEAARQAALDKIKAVQQQLEAGGSFATLAREYSDDPGSREKGGDLGFTRKGELV 242 Query: 244 PQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK-HE 301 P F+ + T+ G I + DK G+ ++ A +K + Sbjct: 243 PSFEEAASVLKPGQISGIVETRFGYHIIQLIDK---EGDRIHTRHILALFDRSKTDIPAT 299 Query: 302 AEYVKKLRSN 311 +K +R + Sbjct: 300 IALLKSIRKD 309 Score = 37.0 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 9/160 (5%), Positives = 37/160 (23%), Gaps = 20/160 (12%) Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + ++ + R +L +K + ++ +K++ Sbjct: 267 YHIIQLIDKEGDRIHTRHILALFDRSKTDIPATIALLKSIRKDVLSGKATFAEMAKKYSD 326 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-----------NNTTNP--YVTQKG---VE 268 + G + +P + + + + P + K Sbjct: 327 DPASATNG--GLITSGSGNPDLEVATLRPDLRKIIDGLKSKGDISQPEKIESDKSAPFYA 384 Query: 269 YIAICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEYVK 306 + + + K ++ +++ Sbjct: 385 LFMLNSRTPAHVLTPEHDFAQIQELALNHKSQELFNAWIE 424 >gi|108810078|ref|YP_653994.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pestis Antiqua] gi|167401555|ref|ZP_02307049.1| chaperone SurA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|121956548|sp|Q1C0H3|SURA_YERPA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|108781991|gb|ABG16049.1| survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) [Yersinia pestis Antiqua] gi|167048937|gb|EDR60345.1| chaperone SurA [Yersinia pestis biovar Antiqua str. UG05-0454] Length = 434 Score = 120 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 102/296 (34%), Gaps = 16/296 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ I ++ + ++ ++ V+ DI + +K+ L Sbjct: 7 LILGLVICANTAFAAPQEVDKVAAVVDNGVVLQSDIDGLLQSVKMNAQQSGLQVPDDSTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ ++ Q +K GIT ++ A ++ S L G+ + Sbjct: 67 RHQILERLIMDNIQLQMAKKMGITITDQALDKAIADIAAQNRMTLAQMRSRLAADGLSYD 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +++ + + + +V N+ + L E+ + ++M N + + IP + Sbjct: 127 TYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQMGNQVSGDTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 Q V + A + + + ++ + G+ + +L F + Sbjct: 187 PTQQQVDQAEDLANKLVADIKGGADFGKLAIANSADSQALKGGQMGWGKLQELPSLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKH 300 L + P + G + + D R + ++ + +P ++ Sbjct: 247 LQSAHKGEIVGPIRSGVGFHILKVNDMRGADQTISVTEVNARHILLKPSPMMTDEQ 302 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 54/168 (32%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + + I+V E R +L Q + AE + Sbjct: 259 IRSGVGFHILKVNDMRGADQTISVTEVNARHILLKPSPMMTDEQARAKLEAAAAEIKSGK 318 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269 ++ + + G+ + P F++ +K + + P + G Sbjct: 319 -TSFATIAKEISQDPGSAMQGGELGWASPDIYDPAFRDALMKLKKGEISAPVHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R+ A + Sbjct: 378 IQLVDTRQVDKTDAAQKERAYRMLFNRKFAEEAQTWMQEQRAAAYVKI 425 >gi|103486961|ref|YP_616522.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingopyxis alaskensis RB2256] gi|98977038|gb|ABF53189.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingopyxis alaskensis RB2256] Length = 446 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 95/257 (36%), Gaps = 11/257 (4%) Query: 44 TTINGEVITDGDISKRIALLKLQKIN--------GELEKIAVQELIVETLKKQEIEKSGI 95 T+NGE+IT DI +R+AL+++ N L LI E L+ QE + I Sbjct: 57 ATVNGEIITATDIEQRMALIRIANNNVELPPEEEQRLRNQVFSNLIDEKLQIQEARAADI 116 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 T D N VN F + A + E F+++L +G KQ + + W ++ + Sbjct: 117 TIDENVVNEQFARLAARFKQTPEQFAAYLASKGSSAAAVKQQIRGEFAWDRLLSRNIQST 176 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 E+ ++M+ ++ ++ N V + + ++ Sbjct: 177 TNVSTEEVDLIVKQMEAAKGQDEFHLGEIYLSATP--DNIAAVTENARKIIQALQAGGSF 234 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICD 274 +F+ V G ++ + L + ++ P G+ + + D Sbjct: 235 AAYARQFSEASTAVVGGDLGWVKGAQLPASMAEAAMQMQPGQLVGPIEVPGGISIMLLID 294 Query: 275 KRDLGGEIALKAYLSAQ 291 +R + A LS + Sbjct: 295 RRQVLTADPRDAILSLK 311 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 2/75 (2%) Query: 244 PQFQNLLKKSQNNTTNPYVTQK-GVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKHE 301 P L+ TT P+ G+ + +C + + + K+ K Sbjct: 371 PLQATLVDLQVGQTTQPFGAANEGISVLVLCGRDMPETATAPNLEQIEQKLLEEKVNKRA 430 Query: 302 AEYVKKLRSNAIIHY 316 Y++ LR +A+I Y Sbjct: 431 QRYLRDLRRDAVIEY 445 >gi|254476741|ref|ZP_05090127.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ruegeria sp. R11] gi|214030984|gb|EEB71819.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ruegeria sp. R11] Length = 283 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 89/304 (29%), Gaps = 51/304 (16%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN---GEL 72 + L +P+ + + + I T+NGE IT G + A L Q L Sbjct: 7 FLSGLALATALTLPLQATAAP-HADTIVATVNGEEITIGHMIIARATLPQQYQQLPDDVL 65 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + +LI +T K + Sbjct: 66 FDAILDQLIQQTALK---------------------------------QQLNGEVPKYVE 92 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + + DV++ E+ +Q E+ +L ++ Sbjct: 93 LSLENESRSLLAADVIEKVMENAATEEEVRAAYEEQYSDGNGGDEFNASHILVESEEDAE 152 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 + + +++ + ++ + G+ + + + P+F+ + Sbjct: 153 EIRAELEE-----------GADFATTARERSTGPSGPNGGELGWFTKGRMVPEFEEAVIA 201 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 S + P TQ G I + ++R A + Q E+ E V+ L + Sbjct: 202 LSAGEISAPVQTQFGWHVIKLNERRKSAA--PEFAEIRDQLAAQIREEAVEESVRTLTTE 259 Query: 312 AIIH 315 A I Sbjct: 260 AEIE 263 >gi|311696171|gb|ADP99044.1| survival protein surA [marine bacterium HP15] Length = 446 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 38/293 (12%), Positives = 105/293 (35%), Gaps = 20/293 (6%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQK--------INGELEKIAVQELIVETLKKQEIE 91 ++ ++ +VI ++ RI + + LE+ + +LI E+++ Q + Sbjct: 32 DQVVAIVDEDVILQTELEARINTITSRLGAQGTALPPRQVLEERVLDQLITESIQMQMAD 91 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 ++G+ N +N A G+S F + L+ +G+ N ++ + + + V + Sbjct: 92 RAGMRISDNELNETMANIAERNGMSLPQFENQLEAEGVTYNQAREQIRKEMLTSRVQQRQ 151 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + E+ + ++ R + + ++ V + AE R Sbjct: 152 VGNRVRVTDREVENYLESLEARGGNNAQYRLAYIFVSVDDPSDEAEVDAAREKAERLRSE 211 Query: 212 LPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGV 267 + + + + + G + E L ++ + ++ G Sbjct: 212 IANGRDFREVAVAESDASNALEGGDMGWRAEGQLPSLVAPVVPELPVGEPSDVLENNSGF 271 Query: 268 EYIAICDKRDLGGEIALKAY-LSAQN-------TPTKIEKHEAEYVKKLRSNA 312 + + DKR + ++ + + T ++ E + ++L++ A Sbjct: 272 HLVMVMDKRGGEQQQMIQQHRVRHILVRPSEATTDSQAETVIRDLYQQLQNGA 324 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 25/285 (8%), Positives = 73/285 (25%), Gaps = 20/285 (7%) Query: 46 INGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + V +TD ++ + L+ + N ++A + D+ Sbjct: 152 VGNRVRVTDREVENYLESLEARGGNNAQYRLA------YIFVSVDDPSDEAEVDAAREKA 205 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 ++ G + + + P +V ++ Sbjct: 206 ERLRSEIANGRDFREVAVAESDASNALEGGDMGWRAEGQLPSLVAPVVPELPVGEPSDVL 265 Query: 165 ANKQKMK----------NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 N R + ++ + I+D + Sbjct: 266 ENNSGFHLVMVMDKRGGEQQQMIQQHRVRHILVRPSEATTDSQAETVIRDLYQQLQNGAS 325 Query: 215 DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAI 272 +++ G ++ + P F+ + P+ +Q G + + Sbjct: 326 FSALAREYSDDPVSGSDGGNLGWVSPGQMVPAFEQAMLDADIGELRGPFRSQFGWHILQV 385 Query: 273 CDKRDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++R ++ K E +++++R A + + Sbjct: 386 QERRQKDISGDVRDAEARQAIYRRKFETELQNWLQEIRDEAFVEF 430 >gi|126664692|ref|ZP_01735676.1| Parvulin-like peptidyl-prolyl isomerase [Marinobacter sp. ELB17] gi|126631018|gb|EBA01632.1| Parvulin-like peptidyl-prolyl isomerase [Marinobacter sp. ELB17] Length = 481 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 102/297 (34%), Gaps = 20/297 (6%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVETLKKQ 88 + ++ ++ +VI ++ RI + + + E L++ + +LI E+++ Q Sbjct: 60 QLLDQVVAIVDDDVILATELDARINSIVTRLQSQETTLPPRSLLQERVLDQLITESVQLQ 119 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 K G+ N +N V A G+S E F L +G+ ++ + + + V Sbjct: 120 MAGKMGMRISDNELNETMVSIAGRNGMSLEQFEQQLANEGVSYRDAREQIRNELLTSRVQ 179 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + + E+ +Q + R I + VQ AE Sbjct: 180 QRQVGSRIRVTDREVENYQQAQQAGGGNTAEYRLAYIFIETEDPSSDASVQTARSKAEAL 239 Query: 209 RLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQ 264 R ++ + + + + + G + +ES L ++ + Sbjct: 240 RQQIVEGRDFRAVAVAESDASNALEGGDMGWRVESQLPSLVAPVVPDLVVGQPSEVLQNS 299 Query: 265 KGVEYIAICDKR----DLGGEIALKAYLS----AQNTPTKIEKHEAEYVKKLRSNAI 313 G + + ++R + ++ T + E + +KL++ A Sbjct: 300 SGFHLVMVMEQRGGEQQKLVQQNRVRHILVQPSDAITEAEAEDKVRDLFEKLQNGAD 356 Score = 97.1 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 15/157 (9%), Positives = 50/157 (31%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + +Q+ R + + + + +++D E + Sbjct: 305 VMVMEQRGGEQQKLVQQNRVRHILVQPSDAITEAEAEDKVRDLFEKLQNGADFAELAKAE 364 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG- 279 + G ++ + P+F+ ++ + P +Q G + + ++R Sbjct: 365 SDDTVSGSDGGNLGWVNPGQMVPEFEQAMQNATVGQIEGPVRSQFGWHLLQVQERRQKDM 424 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++ K E +++++R A + + Sbjct: 425 SDEFRESETRQTLYQRKFENELQNWLREIRDEAFVEF 461 >gi|124265396|ref|YP_001019400.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylibium petroleiphilum PM1] gi|124258171|gb|ABM93165.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylibium petroleiphilum PM1] Length = 437 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 93/300 (31%), Gaps = 13/300 (4%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--------LQKINGELEKIA 76 F + + I ++ E++T+ ++ +R+A L+ + EL + Sbjct: 22 FVANAVAQPSPVRSADYIVAIVDRELVTNAEVQQRLAALRREAAQSGQALPPDDELRRRM 81 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + LI E + +SG+ D ++ A ++ L + GI + F+ Sbjct: 82 LDTLIDERAQLSAARESGVRIDEAELDRTVGNVAAQNRITLAQLRERLQRDGIEFSRFRS 141 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 L Q + V + + + + E+ + L Sbjct: 142 NLRDQLLLERVREREVQSRIKISDSEVETLLASRASGVAPPQFNVAQLLIGVPEGAGEAE 201 Query: 197 FVQKRI-KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 Q+R+ + R R +D +L S G L F + ++ + Sbjct: 202 LAQRRVLAEQALQRARGGEDFARLVNELSTGSKEQGGALGLRTLDRLPDLFADAVRDLRG 261 Query: 256 N--TTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + G + + ++RD G ++ + + + + + + Sbjct: 262 GAIVPQVLQSGAGFHVLKVVERRDGGMMVPQTRARHILLRTSAQLTQSAAVARLAEFKQQ 321 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 44/122 (36%), Gaps = 2/122 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-Q 254 V + + ++ + + G+ + P+F+ +K Sbjct: 310 AAVARLAEFKQQVDSGKASFAQLARENSEDGSAAQGGELGWASPGQFVPEFEEAMKALGI 369 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAI 313 N ++P V++ GV I + ++R + + + + K E E+ + +R+ A Sbjct: 370 NQVSDPVVSRFGVHLIQVLERRSVPVDRKQQREIARNVLREQKFESAYQEWARDVRARAY 429 Query: 314 IH 315 + Sbjct: 430 VE 431 >gi|22127555|ref|NP_670978.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pestis KIM 10] gi|45443417|ref|NP_994956.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pestis biovar Microtus str. 91001] gi|51594986|ref|YP_069177.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pseudotuberculosis IP 32953] gi|108810533|ref|YP_646300.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pestis Nepal516] gi|145600395|ref|YP_001164471.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pestis Pestoides F] gi|150260469|ref|ZP_01917197.1| survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) [Yersinia pestis CA88-4125] gi|153949109|ref|YP_001402397.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pseudotuberculosis IP 31758] gi|165928093|ref|ZP_02223925.1| chaperone SurA [Yersinia pestis biovar Orientalis str. F1991016] gi|165937810|ref|ZP_02226371.1| chaperone SurA [Yersinia pestis biovar Orientalis str. IP275] gi|166008803|ref|ZP_02229701.1| chaperone SurA [Yersinia pestis biovar Antiqua str. E1979001] gi|166212220|ref|ZP_02238255.1| chaperone SurA [Yersinia pestis biovar Antiqua str. B42003004] gi|167422012|ref|ZP_02313765.1| chaperone SurA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426071|ref|ZP_02317824.1| chaperone SurA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470553|ref|ZP_02335257.1| chaperone SurA [Yersinia pestis FV-1] gi|170025786|ref|YP_001722291.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pseudotuberculosis YPIII] gi|186893987|ref|YP_001871099.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pseudotuberculosis PB1/+] gi|218927692|ref|YP_002345567.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pestis CO92] gi|229836923|ref|ZP_04457088.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Yersinia pestis Pestoides A] gi|229840382|ref|ZP_04460541.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842462|ref|ZP_04462617.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Yersinia pestis biovar Orientalis str. India 195] gi|229900721|ref|ZP_04515845.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Yersinia pestis Nepal516] gi|270487908|ref|ZP_06204982.1| PPIC-type PPIASE domain protein [Yersinia pestis KIM D27] gi|294502589|ref|YP_003566651.1| survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) [Yersinia pestis Z176003] gi|81691900|sp|Q66EQ7|SURA_YERPS RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|121956556|sp|Q7CG87|SURA_YERPE RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|121956562|sp|Q1CMT0|SURA_YERPN RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|21960659|gb|AAM87229.1|AE013971_5 survival protein [Yersinia pestis KIM 10] gi|45438286|gb|AAS63833.1| survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) [Yersinia pestis biovar Microtus str. 91001] gi|51588268|emb|CAH19875.1| peptidyl-prolyl cis-trans isomerase, survival protein [Yersinia pseudotuberculosis IP 32953] gi|108774181|gb|ABG16700.1| survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) [Yersinia pestis Nepal516] gi|115346303|emb|CAL19174.1| survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) [Yersinia pestis CO92] gi|145212091|gb|ABP41498.1| survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) [Yersinia pestis Pestoides F] gi|149289877|gb|EDM39954.1| survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) [Yersinia pestis CA88-4125] gi|152960604|gb|ABS48065.1| chaperone SurA [Yersinia pseudotuberculosis IP 31758] gi|165914222|gb|EDR32838.1| chaperone SurA [Yersinia pestis biovar Orientalis str. IP275] gi|165919954|gb|EDR37255.1| chaperone SurA [Yersinia pestis biovar Orientalis str. F1991016] gi|165992142|gb|EDR44443.1| chaperone SurA [Yersinia pestis biovar Antiqua str. E1979001] gi|166206966|gb|EDR51446.1| chaperone SurA [Yersinia pestis biovar Antiqua str. B42003004] gi|166960149|gb|EDR56170.1| chaperone SurA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167054994|gb|EDR64794.1| chaperone SurA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752320|gb|ACA69838.1| SurA domain [Yersinia pseudotuberculosis YPIII] gi|186697013|gb|ACC87642.1| SurA domain protein [Yersinia pseudotuberculosis PB1/+] gi|229682060|gb|EEO78152.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Yersinia pestis Nepal516] gi|229690772|gb|EEO82826.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Yersinia pestis biovar Orientalis str. India 195] gi|229696748|gb|EEO86795.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705866|gb|EEO91875.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Yersinia pestis Pestoides A] gi|262360619|gb|ACY57340.1| survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) [Yersinia pestis D106004] gi|262364565|gb|ACY61122.1| survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) [Yersinia pestis D182038] gi|270336412|gb|EFA47189.1| PPIC-type PPIASE domain protein [Yersinia pestis KIM D27] gi|294353048|gb|ADE63389.1| survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) [Yersinia pestis Z176003] gi|320016865|gb|ADW00437.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 434 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 102/296 (34%), Gaps = 16/296 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72 +++ I ++ + ++ ++ V+ DI + +K+ L Sbjct: 7 LILGLVICANTAFAAPQEVDKVAAVVDNGVVLQSDIDGLLQSVKMNAQQSGQQVPDDSTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ ++ Q +K GIT ++ A ++ S L G+ + Sbjct: 67 RHQILERLIMDNIQLQMAKKMGITITDQALDKAIADIAAQNRMTLAQMRSRLAADGLSYD 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +++ + + + +V N+ + L E+ + ++M N + + IP + Sbjct: 127 TYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQMGNQVSGDTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 Q V + A + + + ++ + G+ + +L F Sbjct: 187 PTQQQVDQAEDLANKLVADIKGGADFGKLAIANSADSQALKGGQMGWGKLQELPSLFAER 246 Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKH 300 L+ + P + G + + D R + ++ + +P ++ Sbjct: 247 LQSAHKGEIVGPIRSGVGFHILKVNDMRGADQTISVTEVNARHILLKPSPMMTDEQ 302 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 54/168 (32%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + + I+V E R +L Q + AE + Sbjct: 259 IRSGVGFHILKVNDMRGADQTISVTEVNARHILLKPSPMMTDEQARAKLEAAAAEIKSGK 318 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269 ++ + + G+ + P F++ +K + + P + G Sbjct: 319 -TSFATIAKEISQDPGSAMQGGELGWASPDIYDPAFRDALMKLKKGEISAPVHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R+ A + Sbjct: 378 IQLVDTRQVDKTDAAQKERAYRMLFNRKFAEEAQTWMQEQRAAAYVKI 425 >gi|330863030|emb|CBX73162.1| chaperone surA [Yersinia enterocolitica W22703] Length = 424 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 37/292 (12%), Positives = 103/292 (35%), Gaps = 16/292 (5%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIA 76 + ++ + ++ ++ V+ D+ + +KL L Sbjct: 1 MVVCANTAFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQAGQQVPDDATLRHQI 60 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 ++ LI++ ++ Q +K GIT ++ A ++ S L G+ + +++ Sbjct: 61 LERLIMDNIQLQMAKKMGITISDEALDKAIADIAAQNRMTPAQMRSRLAADGLNYDTYRE 120 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + + +V N+ + L E+ + +++ N T + + IP + +Q Sbjct: 121 QIRKEMLTSEVRNNEVRRRITILPQEVESLAKQIGNQTSGDAELNLSHILIPLPENPSQQ 180 Query: 197 FVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252 V + A++ + + ++ + G+ + +L F + L Sbjct: 181 QVDQAEDLAKKLVSDIKGGADFGKLAIANSADSQALKGGQMGWGKLQELPSLFAERLQSA 240 Query: 253 SQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKH 300 S+ + P + G + + D R + ++ + +P + Sbjct: 241 SKGDVVGPIRSGVGFHILKVNDIRGTDKTISVTEVHARHILLKPSPVMTDDQ 292 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 54/168 (32%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + K I+V E R +L +Q + A+ + Sbjct: 249 IRSGVGFHILKVNDIRGTDKTISVTEVHARHILLKPSPVMTDDQARAKLTAAAADIKSGK 308 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269 ++ + + G + P F++ +K + + P + G Sbjct: 309 ANF-ATIAKEISQDPGSAMQGGDLGWASPDIYDPAFRDALMKLQKGEISAPVHSSFGWHL 367 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R+ A + Sbjct: 368 IQVVDTRQVDKTDAAQKDRAYRMLFSRKFAEEAQTWMQEQRAAAYVKI 415 >gi|315500015|ref|YP_004088818.1| ppic-type peptidyl-prolyl cis-trans isomerase [Asticcacaulis excentricus CB 48] gi|315418027|gb|ADU14667.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Asticcacaulis excentricus CB 48] Length = 423 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 105/263 (39%), Gaps = 8/263 (3%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL-------QKINGELEKIAVQELIVE 83 + ++ + + +N ++I+ D+ +R+ LL + Q+ ++ A++ LI E Sbjct: 32 PAAQARPLGEGVVALVNDKLISSYDLKQRMLLLIITSGVQVTQQNYAAFQQQALRALIDE 91 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 L+ E + + ++ A+ +GLS + + L + GI + + + Sbjct: 92 HLQLAEADHFKLNVSDEEIDEEIANMAQQSGLSKDQLLAELKRAGIEAQTLRDQIKAEIA 151 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 W +V F K + ++ A K+ + + + + P+ + + Sbjct: 152 WGQLVNGRFRPKARVGKDQVDAFMTKLTEDSQKPQYLVAEILIDPEVAGGQKEAEAGAQQ 211 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYV 262 ++ + + +F++ + G A +L+ + P+ + + + T P V Sbjct: 212 LFDQIAQGVAPFQSVARQFSNAPSAANGGDAGWLVSGTIDPKIETVLKGMNPGQMTRPIV 271 Query: 263 TQKGVEYIAICDKRDLGGEIALK 285 T +GV + +K++ + ++ Sbjct: 272 TDEGVYIYYLREKKEGKADAKVR 294 Score = 63.2 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 37/107 (34%), Gaps = 1/107 (0%) Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVE 268 R VS+ + SDL P++ + +T P + Sbjct: 315 FRAKYPTCDALNNEKGNGQVSVADLGFTALSDLKPEYASALQPLKVGQSTEPMKNTMNIN 374 Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +CDK G ++ + + + T K+ Y++ +R A I Sbjct: 375 VVYVCDKTAAGDDVPSREQVEQRLTQQKVAMLGRRYLRDIRDGATIE 421 >gi|162420091|ref|YP_001605345.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pestis Angola] gi|162352906|gb|ABX86854.1| chaperone SurA [Yersinia pestis Angola] Length = 434 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 102/296 (34%), Gaps = 16/296 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72 +++ I ++ + ++ ++ V+ DI + +K+ L Sbjct: 7 LILGLVICANTAFAAPQEVDKVAAVVDNGVVLQSDIDGLLQSVKMNAQQSGQQVPDDSTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ ++ Q +K GIT ++ A ++ S L G+ + Sbjct: 67 RHQILERLIMDNIQLQMAKKMGITITDQALDKAIADIAAQNRMTLAQMRSRLAADGLSYD 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +++ + + + +V N+ + L E+ + ++M N + + IP + Sbjct: 127 TYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQMGNQVSGDTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 Q V + A + + + ++ + G+ + +L F Sbjct: 187 PTQQQVDQAEDLANKLVADIKGGADFGKLAIANSADSQALKGGQMGWGKLQELPSLFAER 246 Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKH 300 L+ + P + G + + D R + ++ + +P ++ Sbjct: 247 LQSAHKGEIVGPIRSGVGFHILKVNDMRGADQTISVTEVNARHILLKPSPMMTDEQ 302 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 54/168 (32%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + + I+V E R +L Q + AE + Sbjct: 259 IRSGVGFHILKVNDMRGADQTISVTEVNARHILLKPSPMMTDEQARAKLEAAAAEIKSGK 318 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269 ++ + + G+ + P F++ +K + + P + G Sbjct: 319 -TNFATIAKEISQDPGSAMQGGELGWASPDIYDPAFRDALMKLKKGEISAPVHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R+ A + Sbjct: 378 IQLVDTRQVDKTDAAQKERAYRMLFNRKFAEEAQTWMQEQRAAAYVKI 425 >gi|51246936|ref|YP_066820.1| hypothetical protein DP3084 [Desulfotalea psychrophila LSv54] gi|50877973|emb|CAG37813.1| hypothetical protein DP3084 [Desulfotalea psychrophila LSv54] Length = 333 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 118/333 (35%), Gaps = 21/333 (6%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + L F+ L T+Y L + ++S + ++ +N EVIT +++ A Sbjct: 1 MHNLPKLLKKFMSLRTSY--LSCIFTLILLSPLQAQVIDKVVAVVNNEVITLSELNAETA 58 Query: 62 LLK-----------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 +K ++ E + A+ +I + L Q+ +++ + V Sbjct: 59 EIKHKITETAPADQQEEAMAEAREGALNSIIDKKLIAQKAKEARVFVSDEEVEGTIAGIQ 118 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + LS E F L K G+ N ++ + Q + V+ D K E +I +K Sbjct: 119 KRASLSREQFIEELKKSGLSFNTYQNNIRSQLLQRKVINYDIRSKIVIPESQIREYYEKE 178 Query: 171 KNITVREYLIRTVLFSIPDNKLQ--NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 I ++ + +K + ++ + K ++ EK+++ Sbjct: 179 YTINAQDGEYYLLQIGFDWDKEEAGSKEKTLQFAKRIHAIAVKGQDFGALAEKYSTLPSA 238 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD-----LGGEI 282 G + D+ + +N + G ++ + Sbjct: 239 KDRGDIGFFAIDDMSENMARAISPLKPGEVSNIIESPAGYQFFKVLSGDQNNSISKAPYA 298 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 +K + A+ +++K + +VK+L+ NA I Sbjct: 299 TVKEVIQAKLFEIQMQKDFSSWVKELKENAYIQ 331 >gi|256828792|ref|YP_003157520.1| SurA domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256577968|gb|ACU89104.1| SurA domain protein [Desulfomicrobium baculatum DSM 4028] Length = 305 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 111/305 (36%), Gaps = 18/305 (5%) Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK---- 74 + V ++ + RI +NGE+IT D+ ++I L Q + + Sbjct: 8 AVLTFSLFFVLAGLGQAAQLVDRIVAVVNGEIITFQDLQQQIRLSVGQTPDPATAEKIAP 67 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + +I + + +QE ++ I + V+ Q LS EDF L QG+ F Sbjct: 68 QVLDGMIDDVILRQEAQRLKIEVSDSEVDNEIRQFKARRRLSEEDFERTLRLQGLTPEQF 127 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 K+ ++ K + EI A ++ ++ E ++ + + D Sbjct: 128 KERSREDITKHKMLGYMVRRKVVVTQEEIDAYMEQNRSELTTERIVDVQMLVLVDE---- 183 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQNLLKK 252 ++ + +E+++ + + ++ P L Sbjct: 184 ----ERANSLWKSLSEGEVSLEEAVERYSIGPKAENGVMRDVSWRELAE--PWRDGLRNL 237 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 S + P++ Q + + D+RD + A++ + K+E+ EY+ LRS Sbjct: 238 SAGELSKPFLVQDKWVILKLLDRRDGVRQEDAAVEEEVREAIMRPKLEERFKEYMNGLRS 297 Query: 311 NAIIH 315 AII Sbjct: 298 KAIIQ 302 >gi|145636275|ref|ZP_01791944.1| stationary-phase survival protein SurA [Haemophilus influenzae PittHH] gi|145270440|gb|EDK10374.1| stationary-phase survival protein SurA [Haemophilus influenzae PittHH] Length = 290 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 105/294 (35%), Gaps = 19/294 (6%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 R+ T++G + + + + + A+ ++I + L ++ +++SG+ Sbjct: 2 AQAEERVVATVDGIPVLESQV-------RANMGKKGDRQSAIDKIIDDILVQKAVQESGV 54 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 D +++ A GL+ F LD QGI N F+Q +A Q + V Sbjct: 55 KIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNTFRQQIANQMVMGAVRNKAIQES 114 Query: 156 YGNLEMEI----------PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 E+ K + + +EY +R +L + Q Q + Sbjct: 115 IDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHILLKLNPLLNDAQAKKQLAKIRS 174 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQY-LLESDLHPQFQNLLKKSQNNTTNPYVTQ 264 + + L+ + + G Y E+ Q ++K Q + P+ T+ Sbjct: 175 DIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPETYAPQFAQTVVKSKQGVISAPFKTE 234 Query: 265 KGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + + RD + T+++ ++VK LR A I Y+ Sbjct: 235 FGWHILEVTGVRDGDLTAEAYTQKAYERLVNTQLQDATNDWVKALRKRANIQYF 288 >gi|226942107|ref|YP_002797181.1| SurA [Laribacter hongkongensis HLHK9] gi|226717034|gb|ACO76172.1| SurA [Laribacter hongkongensis HLHK9] Length = 434 Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 102/286 (35%), Gaps = 14/286 (4%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVETLKKQEIE 91 RI +N + IT + R+ + Q + L++ ++ +I E ++ Q Sbjct: 34 DRIVAVVNKQAITQQALDTRVREAEAQLTRQKVPLPPAGVLQQQMLERMINEEVQLQYAG 93 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 +GI DS ++ + A L+ E F + L GI + F+ L+ Q I + + + Sbjct: 94 NNGIALDSAELDRIMDRLAEQNRLTPEQFRARLKADGINEAAFRADLSRQVILDRLRERE 153 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTV-LFSIPDNKLQNQGFVQKRIKDAEESRL 210 K + E+ A + + E+ + + + Q Q+R DA Sbjct: 154 VDSKVNVSDSEVDAVLRSAVSANRTEFRLSHILITLPEQASPQEVAKRQQRASDAAAKLA 213 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEY 269 ++ +S G + + L P F L + +T + G+ Sbjct: 214 AGAPFAQVAASYSDAQDALSGGDLGWRSATRLPPVFVAALEQLKPGQSTQVLRSANGLHI 273 Query: 270 IAICDKRDLGGEIALK----AYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + +R G ++ ++ + +K + ++R Sbjct: 274 LKLEARRSRGDAQMVEQRQVRHILVRANEITSDKDAQTRILQIRDR 319 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 30/280 (10%), Positives = 82/280 (29%), Gaps = 19/280 (6%) Query: 45 TINGEVITDGDISKRIALLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGIT 96 +N ++D ++ + L + A + + + ++ + + Sbjct: 157 KVN---VSDSEVDAVLRSAVSANRTEFRLSHILITLPEQASPQEVAKRQQRASDAAAKLA 213 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 + LS D + V+++ L Sbjct: 214 AGAPFAQVAASYSDAQDALSGGDLGWRSATRLPPVFVAALEQLKPGQSTQVLRSANGLHI 273 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + ++ + + + N++ + Q RI + Sbjct: 274 ------LKLEARRSRGDAQMVEQRQVRHILVRANEITSDKDAQTRILQIRDRIANGMPFA 327 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK 275 + ++ G ++ D+ P+F+ + P + G I + Sbjct: 328 EAAKLYSEDGSAPKGGDLGWVNPGDMVPEFERAYLALPVGQLSQPVRSPFGWHLILVDGT 387 Query: 276 RDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 R G+ +A + + K E+ AE++++LR++A + Sbjct: 388 RQQDIGDARQRAEIRQELRARKSEQVYAEWLQQLRASAYV 427 >gi|241662025|ref|YP_002980385.1| SurA domain-containing protein [Ralstonia pickettii 12D] gi|240864052|gb|ACS61713.1| SurA domain protein [Ralstonia pickettii 12D] Length = 500 Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 91/304 (29%), Gaps = 21/304 (6%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRI----ALLKLQKINGELEK----IAVQEL 80 + + +N +VIT ++ R + Q +++L Sbjct: 81 TAPGAPRSQLVDEVVAVVNTDVITRRELLNRADLVERTFRAQNRPLPPRADLLGEVLEQL 140 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I+E ++ Q ++SGI V+ A+ LS S L G+ + ++ L Sbjct: 141 ILERVQAQTAKESGIRVSDADVDRAVESVAQRNNLSVPQLKSKLKDAGMTYDKYRDDLRQ 200 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKM-----KNITVREYLIRTVLFSIPDNKLQNQ 195 + + + + + K + EI + + + + ++ + Sbjct: 201 EILLARLREREVDSKVQVYDGEIDNYLAQQGGGTAPAGEQQYNVAQILVPVAEGATDAEK 260 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQ 254 +K+ + + + G+ L F N ++ Sbjct: 261 AAARKKAEGLLKQAQGGADFAKLARDNSGAQDAAQGGELGLRPIGRLPAVFANAVVDMKA 320 Query: 255 NNT-TNPYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKIEKHEAEYVKK 307 + + G I + DKR G IA K ++ + PT + Sbjct: 321 GQVASQVVESPAGYHVIKLLDKRAPGTAIAAKVQQTQVRHILIKTGPTMSADDARRQLVG 380 Query: 308 LRSN 311 LR Sbjct: 381 LRDR 384 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 20/178 (11%), Positives = 62/178 (34%), Gaps = 2/178 (1%) Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 V G +++ + I + + I + ++ Sbjct: 317 DMKAGQVASQVVESPAGYHVIKLLDKRAPGTAIAAKVQQTQVRHILIKTGPTMSADDARR 376 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 ++ + + + +++ + G+ ++ L P+F+ + + + + Sbjct: 377 QLVGLRDRIVHGYDFGDAARRYSQDGSAGAGGELGWVSPGQLVPEFEQAMNQLKPGDVSQ 436 Query: 260 PYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P +Q GV I + +R+ + Y + K++ +++++LR +A + Y Sbjct: 437 PVQSQFGVHLIQVEGRREAEVSGDRQRDYARSVIREQKVQAAYEDWLRELRDSAHVEY 494 >gi|59710895|ref|YP_203671.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Vibrio fischeri ES114] gi|75507097|sp|Q5E863|SURA_VIBF1 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|59478996|gb|AAW84783.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Vibrio fischeri ES114] Length = 437 Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 37/295 (12%), Positives = 100/295 (33%), Gaps = 15/295 (5%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVETL 85 + R+ ++ V+ DI + +K+ L + +++LIV+T+ Sbjct: 22 AAPVELDRVVAIVDEGVVLQSDIDTSLKTVKINAQEKGQPLPDEAVLREQVLEKLIVDTI 81 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + Q+ EK GI D + A+ ++ QG+ +F++ + + Sbjct: 82 QSQQAEKMGIRIDDTRLEAALNDIAKENNMTLAQLQQKTAAQGLPYANFREQIRKEIAAS 141 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + + L E+ + Q + T + + Q + K A Sbjct: 142 EARNAQVRRRINILPQEVESLAQLLAEETQATVQYKISHIQLRVEDGATQADKEALEKQA 201 Query: 206 EESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPY 261 E+ RL + + ++ + G ++ + ++ F + + +N+ P+ Sbjct: 202 EDLTERLKQGADFATMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQITGQGKNSIIGPF 261 Query: 262 VTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + G + I D + + ++ + + ++ + + + Sbjct: 262 RSGVGFHILKIDDVKGLETVAVTEVNARHILIKTSVIMSDEGAQRLLNTIIDDIK 316 Score = 75.9 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 31/275 (11%), Positives = 84/275 (30%), Gaps = 11/275 (4%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + KI+ +L VE Q +K + + + Q A Sbjct: 154 ILPQEVESLAQLLAEETQATVQYKISHIQLRVEDGATQA-DKEALEKQAEDLTERLKQGA 212 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 ++ QG ++ + G + + K+ Sbjct: 213 DFATMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQITGQGKNSIIGPFRSGVGFHILKI 272 Query: 171 KNITV------REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 ++ E R +L ++ + + ++++ Sbjct: 273 DDVKGLETVAVTEVNARHILIKTSVIMSDEGAQR-LLNTIIDDIKSGKETFADMAQRYSQ 331 Query: 225 KI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GE 281 + G+ + P+F++ ++ + P+ T G + ++R + + Sbjct: 332 DPGSAANDGELGFQTPDLYVPEFKHQVETLPVGQISAPFKTVHGWHIAEVLERRQVDRTD 391 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A+K K + +++++R++A + Sbjct: 392 AAMKNKAYRILLNRKFNEEAGAWLQEIRASAYVEI 426 >gi|237746912|ref|ZP_04577392.1| chaperone SurA [Oxalobacter formigenes HOxBLS] gi|229378263|gb|EEO28354.1| chaperone SurA [Oxalobacter formigenes HOxBLS] Length = 468 Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 34/292 (11%), Positives = 96/292 (32%), Gaps = 25/292 (8%) Query: 47 NGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFD 98 N +VIT G++++RI +++ Q L+K ++ +IVE+ + Q ++ G+ D Sbjct: 59 NNDVITMGELNERIQMIESQLQKQNVNLPPRAELQKQVLEHMIVESAQMQLAKEMGLRID 118 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 ++ + A + ++ F ++++ G ++ + + + + + K Sbjct: 119 DTQLDRTIARIAESKHMTVPQFQQYIERDGTSFESHREKIRSEITMQRLRDREVVNKIQI 178 Query: 159 LEMEIPAN--KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + E+ + + L ++ + + ++R + + Sbjct: 179 NDAEVDHLLGADSQMQMPEQVRLGHILIRIPENASPEQIAEKRERAEKVLQILQSGGDFQ 238 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK 275 ++ +S G + L F + + N T + G + + DK Sbjct: 239 QNAASYSDADEGLSGGDIGWRSTDRLPKIFADALVGVKPGNITGIIKSPNGFHILKVLDK 298 Query: 276 RDLG--------------GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 R + + ++ + + L+ Sbjct: 299 RSMSTGPEPVAGAADGNAVQQIHARHILIKVNQLVSADEAKRKLLDLKQRIQ 350 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 46/139 (33%), Gaps = 2/139 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + + + +K + + + + +++ G ++ Sbjct: 321 HARHILIKVNQLVSADEAKRKLLDLKQRIQNDSASFEELAKTYSNDTSASRGGDLGWIYP 380 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKI 297 D P+F+ L + P TQ G I + DK+ + K KI Sbjct: 381 GDTVPEFEKALVSLQPGEISEPVETQFGFHLIQVLDKKTDDVSLERKRIAAKQALRERKI 440 Query: 298 EKHEAEYVKKLRSNAIIHY 316 + E++++LR A + Y Sbjct: 441 AEATEEWLRQLRDRAYVEY 459 >gi|264680840|ref|YP_003280750.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas testosteroni CNB-2] gi|262211356|gb|ACY35454.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas testosteroni CNB-2] Length = 475 Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 99/298 (33%), Gaps = 18/298 (6%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--------QKINGELEKIAVQELIVE 83 + + + I +N E IT+ ++ R+ + EL + ++ LIVE Sbjct: 62 AAQGVRSADYIVAVVNSEPITNNEVRARMERVAQNVTEQGGQLPSQSELARQVLERLIVE 121 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 ++ QE + +GI D+ TV+ AR S L +GI + F+ + Q + Sbjct: 122 RVQLQEAKDTGINIDNMTVDQAVANVARQNNTDKAGLVSRLKAEGISEAQFRSEIRNQML 181 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-----RTVLFSIPDNKLQNQGFV 198 V + D + E +I + K ++ + Sbjct: 182 MQRVRERDVDGRVKVGEADIDRYLKDQKRPGDAAAGAAANLGHILITVPENASPAVVAER 241 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 + + K A E+ + P + +F+ + G SD F Q + + Sbjct: 242 EAKAKQAAEAARKNPDFIAAVREFSDVPNGQGGGAMGMRPMSDYPELFSQQVGNSAVGAI 301 Query: 258 TNPYVTQKGVEYIAICDKRDLGG----EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 P+ + G + + +K G ++ E A+ ++ + Sbjct: 302 VGPFRSGAGFHVLKVLEKSQAGAPVYITQNHARHILLTVGDGMTEAQAAKRLEDYKRR 359 Score = 99.7 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 3/167 (1%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 F G +++ Q + + + R +L ++ D + Q + + Sbjct: 305 FRSGAGFHVLKVLEKSQAGAPVYITQNHARHILLTVGDGMTEAQAAKRLEDYKRRVEAGQ 364 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ + G + P+F+ + +NP V++ GV I Sbjct: 365 ATFQ-QLAQEFSKDGSARNGGDLGWSSPGQFVPEFERVLDNLQPGQISNPVVSRFGVHLI 423 Query: 271 AICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++R + + K E+ ++K+LR A + Y Sbjct: 424 QLIERRQEKLTEREQREMVRNVVRERKAEQDYETWLKELRGKAFVEY 470 >gi|300705125|ref|YP_003746728.1| peptidyl-prolyl cis-trans isomerase (ppiase), involved in maturation of outer membrane proteins [Ralstonia solanacearum CFBP2957] gi|299072789|emb|CBJ44144.1| peptidyl-prolyl cis-trans isomerase (PPIase), involved in maturation of outer membrane proteins [Ralstonia solanacearum CFBP2957] Length = 474 Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 92/303 (30%), Gaps = 20/303 (6%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRI----ALLKLQKINGELEK----IAVQEL 80 + + +N ++IT ++ R L+ Q +++L Sbjct: 56 TASGAARSQLVDEVVAVVNTDIITRRELLDRADLVERTLQAQNRPMPARADLLGEVLEQL 115 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I+E ++ Q ++SGI V+ A+ LS S L + G+ + +++ L Sbjct: 116 ILERVQAQTAKESGIRVSDADVDRAVESVAQRNNLSVPQLKSKLVQSGLAYDKYREDLRQ 175 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + + K + EI Q+ T +P + + Sbjct: 176 EILLARLRDREVDSKVQVFDGEIDNFLAQQGGGATGEAQEYNVAQILVPVAEDASAEQKA 235 Query: 200 KRIKDAEESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 AE + + + +S G+ L QF N + Sbjct: 236 AARGKAENLLKQAQGGADFAKLVRDNSSGPEAAQGGELGLRSIGRLPTQFANAVVDLKPG 295 Query: 256 NTTN-PYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKIEKHEAEYVKKL 308 + G + + DKR G + K ++ + PT + L Sbjct: 296 QLAGQVIESPAGFHVLKLVDKRAPGTAASAKVAQTQVRHILIKTGPTMSADDARRQLAGL 355 Query: 309 RSN 311 R Sbjct: 356 RDR 358 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 19/178 (10%), Positives = 61/178 (34%), Gaps = 2/178 (1%) Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + G +++ + + + + I + ++ Sbjct: 291 DLKPGQLAGQVIESPAGFHVLKLVDKRAPGTAASAKVAQTQVRHILIKTGPTMSADDARR 350 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 ++ + + + +++ + G+ ++ L P+F+ + + Sbjct: 351 QLAGLRDRIVHGYDFSDAARRYSQDTSASAGGELGWVSPGQLVPEFEQAMNLLKPGEVSQ 410 Query: 260 PYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P +Q GV I + +RD + + Y + K++ +++++LR +A + Y Sbjct: 411 PVQSQFGVHLIQVEGRRDAEVPVDRQRDYARSVIREQKVQAAYEDWLRQLRDSAHVEY 468 >gi|163797530|ref|ZP_02191481.1| Parvulin-like peptidyl-prolyl isomerase [alpha proteobacterium BAL199] gi|159177279|gb|EDP61838.1| Parvulin-like peptidyl-prolyl isomerase [alpha proteobacterium BAL199] Length = 406 Score = 119 bits (296), Expect = 7e-25, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 92/263 (34%), Gaps = 9/263 (3%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK-------IAVQELIVETLK 86 + RI +N E+++ D+ R+ ++ + ++ ++ L+ E ++ Sbjct: 7 AAAQEQQRIAAVVNDEILSMRDLRSRLRMVIVSSRLPATDETAQRLAPQVLRSLVDEQIQ 66 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 QE ++ + + + + L F F+ G+ + L Q W Sbjct: 67 LQEAKRLNVAVTDQDLARARSEVEQRNNLKPGQFEEFVRSLGVDPETVIRQLKSQVAWTK 126 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 +V+ F + E+ Q+M+ + R + + N+ V++ + Sbjct: 127 LVRRRFGNDVTISQEEVTDVLQRMEADAGKT-QKRVSEIVLTVDDPANEEQVRQLAERIV 185 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQK 265 E +F++ + G ++L + P+ + + K + P T Sbjct: 186 EQLKAGANFGAVARQFSASANAAVGGDVGWVLAERMAPEIAEAVAKLETGQISAPVRTLF 245 Query: 266 GVEYIAICDKRDLGGEIALKAYL 288 G + + D R + L A + Sbjct: 246 GYHIVQVADSRVIAAVDPLTATV 268 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 23/270 (8%), Positives = 75/270 (27%), Gaps = 1/270 (0%) Query: 47 NGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 N I+ +++ + ++ + + + + ++++ + Sbjct: 134 NDVTISQEEVTDVLQRMEADAGKTQKRVSEIVLTVDDPANEEQVRQLAERIVEQLKAGAN 193 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 ++ + + D + +A + + ++ + Sbjct: 194 FGAVARQFSASANAAVGGDVGWVLAERMAPEIAEAVAKLETGQISAPVRTLFGYHIVQVA 253 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 ++ + V+ + E+ ++C + A +I Sbjct: 254 DSRVIAAVDPLTATVDLKQVFLPVPPNAGKDVRPSQQALAEALSGSAQNCTDFVELAKEI 313 Query: 227 HDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 + +L P + + TT GV + +C ++ + Sbjct: 314 KSPVSPDLGEMKVGELAPPLRERVAGLKVGETTGAVDLPNGVMVVMVCSRQAPPSNLPSP 373 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +Q + E Y++ LR NA + Sbjct: 374 EQIRSQLEAQRFEILAQRYLRDLRRNAFVE 403 >gi|299531915|ref|ZP_07045315.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas testosteroni S44] gi|298720090|gb|EFI61047.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas testosteroni S44] Length = 475 Score = 119 bits (296), Expect = 7e-25, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 99/298 (33%), Gaps = 18/298 (6%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--------QKINGELEKIAVQELIVE 83 + + + I +N E IT+ ++ R+ + EL + ++ LIVE Sbjct: 62 AAQGVRSADYIVAVVNSEPITNNEVRARMERVAQNVTEQGGQLPSQSELARQVLERLIVE 121 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 ++ QE + +GI D+ TV+ AR S L +GI + F+ + Q + Sbjct: 122 RVQLQEAKDTGINIDNMTVDQAVANVARQNNTDKAGLVSRLKAEGISEAQFRSEIRNQML 181 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-----RTVLFSIPDNKLQNQGFV 198 V + D + E +I + K ++ + Sbjct: 182 MQRVRERDVDGRVKVGEADIDRYLKDQKRPGDAAAGAAANLGHILITVPENASPAVVAER 241 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 + + K A E+ + P + +F+ + G SD F Q + + Sbjct: 242 EAKAKQAAEAARKNPDFIAAVREFSDVPNGQGGGAMGMRPMSDYPELFSQQVGNSAVGAI 301 Query: 258 TNPYVTQKGVEYIAICDKRDLGG----EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 P+ + G + + +K G ++ E A+ ++ + Sbjct: 302 VGPFRSGAGFHVLKVLEKSQAGAPVYITQNHARHILLTVGDGMTEAQAAKRLEDYKRR 359 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 3/167 (1%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 F G +++ Q + + + R +L ++ D + Q + + Sbjct: 305 FRSGAGFHVLKVLEKSQAGAPVYITQNHARHILLTVGDGMTEAQAAKRLEDYKRRVEAGQ 364 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ + G + P+F+ + +NP V++ GV I Sbjct: 365 ATFQ-QLAQEFSKDGSARNGGDLGWSSPGQFVPEFERVLENLQPGQISNPVVSRFGVHLI 423 Query: 271 AICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++R + + K E+ ++K+LR A + Y Sbjct: 424 QLIERRQEKLTEREQREMVRNVVRERKAEQDYETWLKELRGKAFVEY 470 >gi|114797858|ref|YP_760847.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Hyphomonas neptunium ATCC 15444] gi|114738032|gb|ABI76157.1| PPIC-type PPIASE domain protein [Hyphomonas neptunium ATCC 15444] Length = 415 Score = 119 bits (296), Expect = 7e-25, Method: Composition-based stats. Identities = 35/290 (12%), Positives = 95/290 (32%), Gaps = 16/290 (5%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS------SRIRTTINGEVITDGDISKRIALLKL 65 ++++ + + A I +N + I+ D+ +R LL L Sbjct: 1 MVRVVFLAAAFAAISVFGAPVSPASAQEADRQTLEGIAAIVNDKPISYSDVRQRARLLLL 60 Query: 66 --------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 Q+ ++ A+++LI E L+ + + + D ++ A G++ Sbjct: 61 TIGASQPTQEQVQQITGQALEQLIDEKLQLDRVSEFEVEVDPVEIDAAVQNMASEAGVTG 120 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 E L G+ ++ + + W ++ + + E ++ +++ + + Sbjct: 121 EVLREQLTSSGVNPASLEEQMRAEIAWNRLMSGLYGNRIRISENQVDDQMSRLRTASQKT 180 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 +F ++ + + ++ +S + G ++ Sbjct: 181 QYRIGEIFLYAPDEATKTEALTAAESI-ISQLQQGADFRVAAQRISSAPTAAAGGDMGWV 239 Query: 238 LESDLHPQFQNLLKKSQN-NTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286 D+ P ++ S P T+ G+ I + KR+ + Sbjct: 240 TIEDIDPTIAEAVRNSSGNGLLEPIQTENGIYIILLGGKREPAEPVTRVD 289 >gi|218461597|ref|ZP_03501688.1| probable peptidyl-prolyl cis-trans isomerase protein [Rhizobium etli Kim 5] Length = 313 Score = 119 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 77/287 (26%), Positives = 139/287 (48%), Gaps = 10/287 (3%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 +S ++ +NG IT GD++KR A L+LQ + K A ++LI ETLK+QE+ + ++ Sbjct: 28 AASEVQAVVNGTAITSGDVAKRQAFLRLQHTKADA-KTAKEQLIDETLKRQEVARVRMSV 86 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 V+ F + + LS E S LD+ G+G +HFK ++A+Q WP VV + Sbjct: 87 SQQDVDASFARFSAGNKLSVEQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARYGSTSR 146 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 ++ + + + + KR +AE SR + P + Sbjct: 147 LSNYDLVSRMMQNNKQKPVTTEYMLQQIIFVIPQAKRAAITGKRKGEAEASRSKFPGC-D 205 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + FA+ + DV++ +L ++ P ++ L+++++ NTT VT KGVEY+AIC +R Sbjct: 206 QSKVFAATMRDVAVRDLGRMLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAICSQRQ 265 Query: 278 LGGEIALKAYLSAQNTPTKI--------EKHEAEYVKKLRSNAIIHY 316 + + A + ++ ++ +Y+ +LR A I Y Sbjct: 266 VSDDQAAEMVFRQEDLDKSKAGKNGPPENENSKKYLDELRKKAQIAY 312 >gi|197334077|ref|YP_002155047.1| chaperone SurA [Vibrio fischeri MJ11] gi|197315567|gb|ACH65014.1| chaperone SurA [Vibrio fischeri MJ11] Length = 437 Score = 119 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 34/295 (11%), Positives = 100/295 (33%), Gaps = 15/295 (5%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVETL 85 + R+ ++ V+ DI + +K+ L + +++LIV+T+ Sbjct: 22 AAPVELDRVVAIVDEGVVLQSDIDTSLKTVKINAQEKGQPLPDEAVLREQVLEKLIVDTI 81 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + Q+ EK GI D + A+ ++ QG+ +F++ + + Sbjct: 82 QSQQAEKMGIRIDDTRLEAALNDIAKENNMTLAQLQQKTAAQGLPYANFREQIRKEIAAS 141 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ---NQGFVQKRI 202 + + L E+ + Q + T + + ++ ++K+ Sbjct: 142 EARNAQVRRRINILPQEVESLAQLLAEETQATVQYKISHIQLRVEDGATQTDKEALEKQA 201 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPY 261 +D E + ++ + G ++ + ++ F + + +N+ P+ Sbjct: 202 EDLTERLKQGADFATMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQITGQGKNSIIGPF 261 Query: 262 VTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + G + I D + + ++ + + ++ + + + Sbjct: 262 RSGVGFHILKIDDVKGLETVAVTEVNARHILIKTSVIMSDEGAQRLLNTIIDDIK 316 Score = 75.9 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 30/275 (10%), Positives = 84/275 (30%), Gaps = 11/275 (4%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + KI+ +L VE + +K + + + Q A Sbjct: 154 ILPQEVESLAQLLAEETQATVQYKISHIQLRVEDG-ATQTDKEALEKQAEDLTERLKQGA 212 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 ++ QG ++ + G + + K+ Sbjct: 213 DFATMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQITGQGKNSIIGPFRSGVGFHILKI 272 Query: 171 KNITV------REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 ++ E R +L ++ + + ++++ Sbjct: 273 DDVKGLETVAVTEVNARHILIKTSVIMSDEGAQR-LLNTIIDDIKSGKETFADMAQRYSQ 331 Query: 225 KI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GE 281 + G+ + P+F++ ++ + P+ T G + ++R + + Sbjct: 332 DPGSAANDGELGFQTPDLYVPEFKHQVETLPVGQISAPFKTVHGWHIAEVLERRQVDRTD 391 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A+K K + +++++R++A + Sbjct: 392 AAMKNKAYRILLNRKFNEEAGAWLQEIRASAYVEI 426 >gi|150395986|ref|YP_001326453.1| SurA domain-containing protein [Sinorhizobium medicae WSM419] gi|150027501|gb|ABR59618.1| SurA domain [Sinorhizobium medicae WSM419] Length = 315 Score = 119 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 84/310 (27%), Positives = 150/310 (48%), Gaps = 7/310 (2%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 + +++L+ + + + + A +S + +NG VIT GD++KR+A L+LQ+ + Sbjct: 5 NSIVRVLSAIALAGALSLATGTATTATAAASSVEVVVNGTVITSGDVAKRVAFLRLQRQS 64 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 G + A Q+L+ E LK+ EI + + ++ V+ F + A LS E L++ G+ Sbjct: 65 GGAAE-AKQQLVDEVLKRAEIARVQQSVSTDEVDAAFARFASGNKLSPEQLGKILEQAGV 123 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 G +HFKQY+A+Q WP VV + ++ + Sbjct: 124 GIDHFKQYIAVQMSWPRVVNFRYGNASRLSGGDLVKRMMQGGGNKPVTTEYFLQQVIFVI 183 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + KR +A SR + P + + FA+ DVSI +L L ++ L Sbjct: 184 PESKRGAITAKRQAEANASRSKFPGC-DTSKAFAANYRDVSIRSLGRILAQQLPEDWKPL 242 Query: 250 LKKSQNNT-TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI----EKHEAEY 304 ++K+ ++ T VT+KGVEY+AIC KR + + A + A++ K + + A+Y Sbjct: 243 VEKAGDSMTTGTRVTEKGVEYLAICKKRQVNDDAAAEIVFRAEDLGKKKSGGEDPNSAKY 302 Query: 305 VKKLRSNAII 314 +++LRS A I Sbjct: 303 LEELRSKAQI 312 >gi|240850229|ref|YP_002971622.1| peptidyl-prolyl cis-trans isomerase [Bartonella grahamii as4aup] gi|240267352|gb|ACS50940.1| peptidyl-prolyl cis-trans isomerase [Bartonella grahamii as4aup] Length = 324 Score = 119 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 68/325 (20%), Positives = 128/325 (39%), Gaps = 11/325 (3%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDI 56 M ++ ++ K + F + ++ + + I T+NG IT+ DI Sbjct: 1 MRKPIY--MNKLKKRVLALFYITSLSVSSLLINGFLIPTVFAQTSIVVTVNGNPITNYDI 58 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +R+A L+LQ+ G L A +ELI E LK EI++ I ++ V+ F A ++ Sbjct: 59 QRRLAFLRLQQKQGNLVAQAKKELIDEKLKNIEIKRRNIEVSNDEVDRAFENFATQNNMT 118 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + + L + I HFK Y+ Q W +V + + G + + + Sbjct: 119 IDQLNQILIQTEITVQHFKDYIRGQIGWGRLVSARYQAETGMISEQEAVRRILKNGGVKP 178 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 T+ + + + +R + + + C A I DV+I Sbjct: 179 STNEYTLQRIVFVIPAHRRSEIFERRQREASNFRAHFRGCANAHNQARGILDVTIRHLGK 238 Query: 237 LLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP- 294 LE L ++ + + T T G+E IA+C + + + + S Q++ Sbjct: 239 FLEPQLPNAWEQAILATPAGKMTKLQETSDGIEAIAVCKIKRVSDDYVARLIFSLQDSKK 298 Query: 295 ---TKIEKHEAEYVKKLRSNAIIHY 316 K+E+ +Y+ +LR A I Sbjct: 299 RSPQKLEELSDKYLGELRRVARIQN 323 >gi|328544014|ref|YP_004304123.1| SurA N-terminal domain family protein [polymorphum gilvum SL003B-26A1] gi|326413758|gb|ADZ70821.1| SurA N-terminal domain family protein [Polymorphum gilvum SL003B-26A1] Length = 307 Score = 119 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 125/282 (44%), Gaps = 3/282 (1%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGI 95 + I+ +N + IT DI++R L+ L + ++A +EL+ + LK +E ++ GI Sbjct: 25 AQTSIKVVVNEQAITSYDIAQRARLITLTQRKSGETARRMAQEELVDDVLKLKEAQRIGI 84 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + V+ F A+ +S + ++ L + G+ + + L + W V F + Sbjct: 85 SVSKGDVDDAFASIAQRVKMSPANLAAALRQSGVDPDTLRARLRAEVAWSRAVGQRFRAQ 144 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + ++ A QK ++ + + I + ++ + K + + Sbjct: 145 VKVSDSDVIAALQKSEDKNKNLSIEFELRQVIFVVPQKASSGLKAQRKREADQFRKEFTS 204 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICD 274 C A +++V + + LE++L P ++ + K T P T +G+E IA+C Sbjct: 205 CETGAAQARTLNEVVVRAIGHRLETELPPALRDTIVKTEVGRLTPPEQTSRGLEMIAVCG 264 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 KR++ +IA + + + + E+ Y+++LR A I Y Sbjct: 265 KREIQSDIAARTAIEDELRQKEGEQMSRRYLQELRRRATIEY 306 >gi|319786209|ref|YP_004145684.1| SurA domain [Pseudoxanthomonas suwonensis 11-1] gi|317464721|gb|ADV26453.1| SurA domain [Pseudoxanthomonas suwonensis 11-1] Length = 442 Score = 119 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 37/315 (11%), Positives = 95/315 (30%), Gaps = 21/315 (6%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMS----SRIRTTINGEVITDGDISKRIALLKLQK----- 67 + +P+ RI + +VI ++ + + Q Sbjct: 7 AIFLAASALLSLPVAGVAQAQQQLQPVERIAAIVEEDVILQSELDLALRNVMAQYAGRES 66 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 LE+ ++ L++ L+ + GI VN A+ GL+ + L Sbjct: 67 QLPPRPVLERQVLERLVLTRLQVARARQQGIRVSEQEVNQAVAMIAQQNGLTLDGLRQRL 126 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 G+ F++ L + + + F+ + E EI A + + + L ++ Sbjct: 127 ASDGLSFEEFRRSLNEEITVQRLRQG-FIQRINVSEGEIDAALAREATGSRQYRLAHILV 185 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLH 243 + Q++++ + D +++ + + G + ++ Sbjct: 186 ALPDGATAEQITTGQRKVEGILNVINKGEMDFAAAAVRYSDSPNALEGGDLGWRSLDEIP 245 Query: 244 PQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRD------LGGEIALKAYLSAQNTPTK 296 F + + P G + + + + RD ++ + + Sbjct: 246 SAFAQQILQLQPGEIFGPVRGPSGFQLLRLTEVRDSAQAPAQTVTEYHVRHILVRVNDRQ 305 Query: 297 IEKHEAEYVKKLRSN 311 + LR+ Sbjct: 306 DAATARAKIDTLRAR 320 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 29/271 (10%), Positives = 69/271 (25%), Gaps = 7/271 (2%) Query: 51 ITDGDISKRIALLKLQKINGELEKI--AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 +++G+I +A L I A+ + K + Sbjct: 159 VSEGEIDAALAREATGSRQYRLAHILVALPDGATAEQITTGQRKVEGILNVINKGEMDFA 218 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD--VVKNDFMLKYGNLEMEIPAN 166 A + + D + A Q + + G + + Sbjct: 219 AAAVRYSDSPNALEGGDLGWRSLDEIPSAFAQQILQLQPGEIFGPVRGPSGFQLLRLTEV 278 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + + + N Q+ + +I + + Sbjct: 279 RDSAQAPAQTVTEYHVRHILVRVNDRQDAATARAKIDTLRARIAGGADFQEVAREASEDN 338 Query: 227 H-DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG-EIA 283 G + P+F + + P+ T G I +R+ + Sbjct: 339 STRGQGGDLGWFPADAYGPEFGGQVTALEDGQVSQPFRTDAGWHIIERVARRETDVTDDN 398 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +A + K+E+ Y++++R A + Sbjct: 399 RRAQIRDTIGRRKLEEEYERYLQEMRGEAYV 429 >gi|187927495|ref|YP_001897982.1| SurA domain [Ralstonia pickettii 12J] gi|309779803|ref|ZP_07674558.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Ralstonia sp. 5_7_47FAA] gi|187724385|gb|ACD25550.1| SurA domain [Ralstonia pickettii 12J] gi|308921380|gb|EFP67022.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Ralstonia sp. 5_7_47FAA] Length = 500 Score = 119 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 90/304 (29%), Gaps = 21/304 (6%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRI----ALLKLQKINGELEK----IAVQEL 80 + + +N +VIT ++ R + Q +++L Sbjct: 81 TAPGAPRSQLVDEVVAVVNTDVITRRELLNRADLVERTFRAQNRPLPPRADLLGEVLEQL 140 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I+E ++ Q ++SGI V+ A+ LS S L G+ + ++ L Sbjct: 141 ILERVQAQTAKESGIRVSDADVDRAVESVAQRNNLSVPQLKSKLKDAGMTYDKYRDDLRQ 200 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKM-----KNITVREYLIRTVLFSIPDNKLQNQ 195 + + + + + K + EI + + + + ++ + Sbjct: 201 EILLARLREREVDSKVQVYDGEIDNYLAQQGGGTAPAGEQQYNVAQILVPVAEGATDAEK 260 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQ 254 +K+ + + + G+ L F N ++ Sbjct: 261 AAARKKAEGLLKQAQGGADFAKLARDNSGAQDAAQGGELGLRPIGRLPAVFANAVVDMKA 320 Query: 255 NNT-TNPYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKIEKHEAEYVKK 307 + + G I + +KR IA K ++ + PT + Sbjct: 321 GQVASQVVESPAGYHVIKLLEKRASSTAIAAKVQQTQVRHILIKTGPTMSADDARRQLVG 380 Query: 308 LRSN 311 LR Sbjct: 381 LRDR 384 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 20/178 (11%), Positives = 62/178 (34%), Gaps = 2/178 (1%) Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 V G +++ + I + + I + ++ Sbjct: 317 DMKAGQVASQVVESPAGYHVIKLLEKRASSTAIAAKVQQTQVRHILIKTGPTMSADDARR 376 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 ++ + + + +++ + G+ ++ L P+F+ + + + + Sbjct: 377 QLVGLRDRIVHGYDFGDAARRYSQDGSAGAGGELGWVSPGQLVPEFEQAMNQLKPGDVSQ 436 Query: 260 PYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P +Q GV I + +R+ + Y + K++ +++++LR +A + Y Sbjct: 437 PVQSQFGVHLIQVEGRREAEVSGDRERDYARSVIREQKVQAAYEDWLRELRDSAHVEY 494 >gi|296313516|ref|ZP_06863457.1| SurA/PPIASE domain protein [Neisseria polysaccharea ATCC 43768] gi|296839936|gb|EFH23874.1| SurA/PPIASE domain protein [Neisseria polysaccharea ATCC 43768] Length = 332 Score = 118 bits (295), Expect = 9e-25, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 92/292 (31%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT+ +++ +A K EL + + +L+ ++L Q ++ Sbjct: 55 SDGIAAVADNEVITNRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLVVQAGKR 114 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ Q+ LS LA I V + Sbjct: 115 RSIQASEAEIDAVVAQNPSLKNLSPTQRR---------------ELADNIIAEKVRQQAV 159 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 160 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 219 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ ++ + P TQ Sbjct: 220 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEETVRSLKPGQVSAPVRTQF 279 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + R+ + ++ + K E+ A+ ++ L S A + Sbjct: 280 GWHIIKLNEVREAGTPQERVRNAVRQYIFQQKAERATADLLRDLHSGAYVDI 331 >gi|95930006|ref|ZP_01312746.1| PPIC-type PPIASE domain protein [Desulfuromonas acetoxidans DSM 684] gi|95133975|gb|EAT15634.1| PPIC-type PPIASE domain protein [Desulfuromonas acetoxidans DSM 684] Length = 303 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 103/302 (34%), Gaps = 6/302 (1%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + V I+ S+I +N E+IT + +R+ + ++ Sbjct: 1 MLKKIVFTALLFSLIIPSVWAEQLSKIAAVVNDEIITTRQLEQRLVSRGERSATDAQKRQ 60 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +I E L +Q + G+ + + + +S E L QG+ + ++ Sbjct: 61 ELDNMINERLMEQRSREIGLEVSDDDIETAINDVQQQNNISREQLEQALIAQGLSMSGYR 120 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + L Q + ++ + K E+ Q+ + + +R + P Sbjct: 121 EQLRGQILRYKLMGYEVKSKVDITRQEVRNYYQEHLDQYRQSPRVRLSRLTFPLGDDPT- 179 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + +L + +++ S + G+ + +L F+ + Sbjct: 180 --AARENATIALRKLDDGESVDEVLVNMSPRTRIEGGEMGSFVAGELSETFEQAIADLDS 237 Query: 255 NNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + T + + + ++ + ++ + + + K+++ E+ + LRS + Sbjct: 238 GDHTPLIPLGDALHILKVEERIPGSVADISTVEEQIRGELSQQKMDQKLQEWRENLRSES 297 Query: 313 II 314 + Sbjct: 298 YV 299 >gi|149914655|ref|ZP_01903185.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter sp. AzwK-3b] gi|149811448|gb|EDM71283.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter sp. AzwK-3b] Length = 411 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 109/282 (38%), Gaps = 5/282 (1%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + F+ L V+ I + S +N + IT +I +R +L L + Sbjct: 1 MRQFLAALALPAVMATSMSWGIAAPASAQNLFAPVVKVNDQAITGYEIQQRARMLTLFRS 60 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 G ++A ++LI E LK +G+ + + + A ++AE+F L+ G Sbjct: 61 PGNPVELAREQLIEERLKVDAARAAGLVLEDADIRVGMEEFASRANMTAEEFIGALEGAG 120 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + +++++ W ++V+ F + + ++ + + + L+ ++ I Sbjct: 121 VSEQSYREFVRAGMTWRELVRARFAPRVSVSDADLERARAALTEDSGVRVLLSEIIMPIT 180 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 + RI + +P + E++++ G+ ++ ++L PQ + Sbjct: 181 PQDAEEVQDRAARISE----LDSIPAFSAEAERYSASATAARGGRLDWMSITNLPPQLRP 236 Query: 249 LLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 ++ + ++P + V + D + A + Sbjct: 237 VILALGPGDVSDPLPIEGAVALFQLRDIEETDTPEPDYAAIE 278 Score = 43.5 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 26/86 (30%), Gaps = 4/86 (4%) Query: 233 KAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKG--VEYIAICDKRDL-GGEIALKAYL 288 +L K + G + ++ +C + GE L Sbjct: 322 DRGSYAPDELPQDIAIELAKLDPGEVSTNLTRSNGQTLVFLMLCGRTPALEGEGPSAEQL 381 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAII 314 + +I+ Y+ +LR+ A I Sbjct: 382 TNLIRNRRIDSFADGYLAQLRAEARI 407 >gi|297569281|ref|YP_003690625.1| SurA domain protein [Desulfurivibrio alkaliphilus AHT2] gi|296925196|gb|ADH86006.1| SurA domain protein [Desulfurivibrio alkaliphilus AHT2] Length = 326 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 97/291 (33%), Gaps = 14/291 (4%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ-----------KINGELEKIAVQELIVETLKKQ 88 R+ +NG++IT ++ +A + K E + + +I + L ++ Sbjct: 34 DRVVAEVNGQIITLSELEAEMATIGEDFLRGVPAGERAKARQEAQSQVLSGMIDQILVER 93 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 + ++ GI ++ Q + LS E+ L++ G ++Q L Q + ++ Sbjct: 94 QAQRRGIFVGEREIDAAMAQIMEDNRLSREELIRELERSGTTLEQYRQTLRTQILQARLL 153 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN-KLQNQGFVQKRIKDAEE 207 + + E I ++ ++ + + QN+ ++R A + Sbjct: 154 NLEVRERIVIPENRIRRYYEEHYADGSQQQGYHLLQMGFAWDGDDQNRAEAKQRATGARD 213 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKG 266 L + + S G + +L + + + + T Sbjct: 214 RVLTGGSFRQLARELSDLPSATSGGDLGVFEQDELADEMRRHILAMTPGELTPIMEIGGA 273 Query: 267 VEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ + + ++ + +E++ +V LR + I Sbjct: 274 YQFFKLLAGGGVSRPYEDMREEIREILYQQALEENFERWVSNLREDVQIRI 324 >gi|221135224|ref|ZP_03561527.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Glaciecola sp. HTCC2999] Length = 431 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 107/312 (34%), Gaps = 15/312 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--- 71 + ++ + VS + ++ ++ VI + +I++ IA +K Sbjct: 1 MKFLGILIGCLWLSVSVSAMAQTELDKVSVIVDQGVILESEINELIATVKESAKKNNQSL 60 Query: 72 -----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 L A++ LI++ L+ Q E+ GI + A+N + + + + + Sbjct: 61 PSDRALRTQAIERLILDNLQMQMAERMGIQVSDPQLEQTIANIAKNQNSTMDQLRAGIAQ 120 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 G+ + +++ + + I +V + + + EI + ++ + R Sbjct: 121 AGLDYDSYRETVRKELITGEVRRANVRRRIYITPQEISSLVALIEEQGNEQAEYRLGHIL 180 Query: 187 IPDNKLQNQGFV---QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 I + ++R + +S + G +L + + Sbjct: 181 IGFPPEPTDADITSARERAEKVLNLLNSGSDFAKIAIASSSGPKALDGGDMGWLNINSMP 240 Query: 244 PQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEK 299 F +++ + + P + G + I + R + E ++ + + E+ Sbjct: 241 TLFAEVVQGKEADELIGPIRSGAGFHILKIQETRGIEVAKLEEINARHILVKPSIILSEQ 300 Query: 300 HEAEYVKKLRSN 311 +++ ++ Sbjct: 301 KVETMLQEFKAQ 312 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 45/141 (31%), Gaps = 3/141 (2%) Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY 236 + + P L Q + + + + + V G+ + Sbjct: 283 EINARHILVKPSIILSEQKVETMLQEFKAQVLEGTADFADLAKAHSEDPGSAVKGGELGF 342 Query: 237 LLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTP 294 S P F++ +K ++ + P + G I + D+R D + + Sbjct: 343 ADPSLYVPAFKDALVKLEKDEISEPIRSVHGWHLIQLIDRRVDDITDRKKQDKAYQLIFN 402 Query: 295 TKIEKHEAEYVKKLRSNAIIH 315 K + +++++R A I Sbjct: 403 RKFAEETDAWLREMREEAFIE 423 >gi|332798185|ref|YP_004459684.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Tepidanaerobacter sp. Re1] gi|332695920|gb|AEE90377.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Tepidanaerobacter sp. Re1] Length = 320 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 40/329 (12%), Positives = 102/329 (31%), Gaps = 34/329 (10%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS--------RIRTTINGEVITDGDISKRIALLK 64 ++ + +L+I I + + + +N E+I D +++ +K Sbjct: 1 MRTIKISILLLICVIAMAGCQNVEKVETQGKIIDGKEVIAKVNDELILKSDYDRQVLQVK 60 Query: 65 LQKIN--------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 E+ + ++ +I + L Q+ EK IT Sbjct: 61 SALEANGQDFSTDEGKKVLKEIREKVLESMINDQLILQQAEKDNITLGEKEFKQAISDLE 120 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + G + +L++Q + + F++ + Q + K + E+ + Sbjct: 121 QYHG-GKDALDKYLEQQELDRSSFEKLVKEQLVINQF-KEKLTSDIKITDEEVKKFYEDN 178 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 K + + D + + + + + + ++ Sbjct: 179 KTMFELPAPEIRASHILVDTENEAKKILAEI--------KAGGDFAALAKDYSKDPGSKE 230 Query: 230 SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 G Y + + P+F+ ++ T G I + +R K Y+ Sbjct: 231 LGGDLGYFSKGKMDPEFEKAAFALKPGEISDVVKTTFGYHIIKVTGERTSLSFDDAKDYI 290 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + +K E+ +Y+ + + + I Y Sbjct: 291 KSNLENSKKEEEFNKYLDEWKKQSKIEKY 319 >gi|302337922|ref|YP_003803128.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta smaragdinae DSM 11293] gi|301635107|gb|ADK80534.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta smaragdinae DSM 11293] Length = 357 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 106/342 (30%), Gaps = 43/342 (12%) Query: 15 LLTTYFVLIIFCIVPI--------VSYKSWAMSSRI------------------RTTING 48 L + F++++F S + + + +NG Sbjct: 8 LFLSLFLIVVFLFPSFMWAGGKKESSEPAPEATESVETTPKERTPIEVASPSDNAAIVNG 67 Query: 49 EVITDGDISKRIALLKL----------QKINGELEKIAVQELIVETLKKQEIEKSGITFD 98 I +++++++ ++ EL+ ++ LI + L QE + G D Sbjct: 68 VAIPLDRYQQQLSVIQQQYLMQGISVPEEQMAELKGQVLESLIDQELLAQEAKGQGYEAD 127 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 V+ Q S E + L +QGI + F L + V + F + Sbjct: 128 QTKVDQQLQQIKGQF-PSEEQYYQALAQQGISEQDFLAELKKSLVVQQFVSDRFASQVAV 186 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR---LPKD 215 E + + V+ +R + + V AE + R + Sbjct: 187 TEEDSKTYYDDNPSYFVQPERVRASHILFSVAEDASDQDVAAAKTKAESALERYKNGEEF 246 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274 + + + G + + + F++ ++P T+ G I + Sbjct: 247 SDLARELSEGPSASQGGDLGFFGRNQMVKPFEDAAFSMKVGEVSDPVRTKFGFHLIRLTA 306 Query: 275 K--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + +K +S ++ + ++ + + + I Sbjct: 307 RNEKGTLPFDQVKPQISDHLYKLRLGELVKAFLDEQKEKSEI 348 >gi|319765026|ref|YP_004128963.1| sura domain protein [Alicycliphilus denitrificans BC] gi|317119587|gb|ADV02076.1| SurA domain protein [Alicycliphilus denitrificans BC] Length = 471 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 98/297 (32%), Gaps = 17/297 (5%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQELIVE 83 + + + I +N E IT+ ++ +R + Q L K ++ LI+E Sbjct: 59 ASPAVRQADYIVAVVNSEPITNNEVRQRAERVAQQLSGQGAAMPPHEVLVKEVLERLILE 118 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 ++ Q ++ GI D VN AR +S ++ L GI F++ L Q + Sbjct: 119 KIQVQLAKEGGIKVDDYAVNQAEQNVARQNDVSVDEMHRRLAADGISKERFREELRNQLL 178 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI----RTVLFSIPDNKLQNQGFVQ 199 V + D + ++E+ Q + + ++ + Sbjct: 179 ALRVRERDVESRVRVSDLEVDQYLQDQQKTAGPGKMEINLGHILVKVPEGASPEEVARRA 238 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT 258 R ++ + +++++ G F + + + + Sbjct: 239 ARAQEVLDKLRAGGDFGVLVQEYSDVPEGSGGGLLGLRPLDRYPELFVTAVQQAAVGSIV 298 Query: 259 NPYVTQKGVEYIAICDKRDLGGE----IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 P + G + + D+ G + ++ + E+ AE ++ LR Sbjct: 299 GPLRSPAGFHILKVVDRSQGGVPTMAVQSHARHILLRVGSGLSERQAAERLEDLRQR 355 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 16/139 (11%), Positives = 45/139 (32%), Gaps = 2/139 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + + L + ++ + +++ G + Sbjct: 328 HARHILLRVGSGLSERQAAERLEDLRQRVLRGQADFATLAREYSQDGSAKDGGDLGWAGP 387 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI-ALKAYLSAQNTPTKI 297 P+FQ L + P V++ GV I + ++R+ + + K+ Sbjct: 388 GRYVPEFQEALNALRPGEISQPVVSRFGVHLIQLLERREAKLTQREQRDMVRDAVREKKL 447 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ ++++ R+ A + Y Sbjct: 448 DEAFTTWIQEARARAYVEY 466 >gi|99082756|ref|YP_614910.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ruegeria sp. TM1040] gi|99039036|gb|ABF65648.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ruegeria sp. TM1040] Length = 283 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 96/308 (31%), Gaps = 52/308 (16%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWA--MSSRIRTTINGEVITDGDISKRIALLKLQKIN- 69 ++ T+ ++F ++ ++A ++ + T+NGE IT G++ A L Q + Sbjct: 1 MRKGLTFLQGVVFATAFGLAAPAFAELNANTVVATVNGEDITVGNMIVARAKLPAQYQSL 60 Query: 70 --GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L K + +LI +T+ KQ++ Sbjct: 61 PDDLLFKALLDQLIQQTVLKQQLHGDIPE------------------------------- 89 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 ++ + DV++ + + + + E+ +L Sbjct: 90 --YVRLSVEHEQRSLLASDVIEAVMEGAQTEDAIRDAYDARYSSDDGGDEFNASHIL--- 144 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 ++ + + ++ ++ + G + + P+F+ Sbjct: 145 --------LESEEAALEIKSQLDEGADFAALAKESSTGPSGPNGGALGWFENGRMVPEFE 196 Query: 248 N-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 + + P TQ G I + D+R E + + ++ + + Sbjct: 197 AAISDMRSGEVSGPVQTQFGWHIIKLNDRR--KLEAPEYEDVRDEIAQELAQQAVEDRIS 254 Query: 307 KLRSNAII 314 +L + A I Sbjct: 255 QLTATATI 262 >gi|326386746|ref|ZP_08208367.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Novosphingobium nitrogenifigens DSM 19370] gi|326208799|gb|EGD59595.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Novosphingobium nitrogenifigens DSM 19370] Length = 467 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 80/257 (31%), Gaps = 14/257 (5%) Query: 44 TTINGEVITDGDISKRIALLKLQK---------INGELEKIAVQELIVETLKKQEIEKSG 94 +NGE+IT DI +R+AL+ L ++ LI ETL+ QE + G Sbjct: 76 AIVNGEIITGTDIDQRLALIINANGGGNKIPAEEQERLRAQVLRNLIDETLQIQEAKGVG 135 Query: 95 ITFDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 I D VN F + A+ G + +L G K+ + + W +++ + Sbjct: 136 IEIDEEEVNQSFDRVAQQNFGQNTAALEKYLTSIGSSAASLKRQIKGEMAWQRLLRRNVQ 195 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E+ + + + +N+ V E + Sbjct: 196 PYINVSDSEVRE--MMDRMKAAKGTEEYHIGEIFLSATDENRSQVLANADKIVEQLKKGG 253 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAI 272 +F+ G ++ L + P G I + Sbjct: 254 SFTAYARQFSEASTAAVGGDLGWIRLVQLPQELATSATTMGPGQLAGPIALAGGYSIIYV 313 Query: 273 CDKRDLGGEIALKAYLS 289 DKR + + + Sbjct: 314 IDKRQVLT-ADARDSIL 329 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 255 NNTTNPYVT-QKGVEYIAICDKRDLGGEI-ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 T P+ + + GV + +C + D E L +Q ++ K Y++ LR +A Sbjct: 403 GEATPPFGSIEDGVRVLMLCGRDDPKVENGPSFEQLQSQIEDDRVNKRAQTYLRDLRRDA 462 Query: 313 IIHY 316 +I Y Sbjct: 463 VIEY 466 >gi|27375316|ref|NP_766845.1| hypothetical protein blr0205 [Bradyrhizobium japonicum USDA 110] gi|27348452|dbj|BAC45470.1| blr0205 [Bradyrhizobium japonicum USDA 110] Length = 323 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 83/305 (27%), Gaps = 47/305 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---SKRIALLKLQKINGE 71 L+ + +++ A + +NG I D+ + + Q Sbjct: 29 RFGLATALVGCLALALIAGPGRAADDPVLAKVNGAEIKKSDVAMAEEELGPSLAQMDPAT 88 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 ++ + LI + + E + Sbjct: 89 KDENVLSFLIDMKIVSKAAEDKKVADSEEFKKRL-------------------------- 122 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + ++ N+ M+ + + +E R +L D Sbjct: 123 ----AFARNRLLMDSLLANEGKAATTPDAMKKVYEEASKQITGEQEVRARHILVETEDEA 178 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLL 250 + + K +K + G + + + P+F Sbjct: 179 KAVKAELDK-----------GADFAELAKKKSKDPGSADGGDLGFFTKEQMVPEFSAVAF 227 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 ++P +Q G I + +KR+ + AQ K +A+YV KLR+ Sbjct: 228 ALEPGKISDPVKSQFGWHIIKVEEKRNRKA--PDFEQVKAQIEQYVTRKAQADYVAKLRT 285 Query: 311 NAIIH 315 A + Sbjct: 286 EAKVE 290 >gi|78224731|ref|YP_386478.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter metallireducens GS-15] gi|78195986|gb|ABB33753.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter metallireducens GS-15] Length = 323 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 92/314 (29%), Gaps = 51/314 (16%) Query: 13 IKLLTTYFVLIIFCIV-----PIVSYKSWAMSSRIRTTINGEVITDGDISKRIA----LL 63 + +L+ + + F + + + +NG+ IT GD K + L Sbjct: 15 LTILSATLLAVPFTGCKGKTETGTATAPAKKAGEVIAEVNGDTITTGDFQKELENLPPYL 74 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 K E +K + ++V L Q+ K G+ + Sbjct: 75 KPMADTAEGKKELLDTMVVRELILQQARKDGLDKSPDVAAKL------------------ 116 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + L + + +K + + E+ ++ K+ + Sbjct: 117 ------------EELKKRVVVEAFLKKKVEEQAKVSDEEMKKFYEENKDKFKTGPQVHAS 164 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 + + + +K + G + + + Sbjct: 165 HILMKSEDEA---------QKVLKELKEGGNFEELAKKHSIDSAAAKGGDLGWFSKGSMV 215 Query: 244 PQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKH 300 P+F+ ++ + T+ T+ G I + KR G +K L A P+K ++ Sbjct: 216 PEFEKVVFGLKEGETSGIVKTKFGYHIIKLTGKRPAGIRTFDEVKEQLRAAILPSKQQEV 275 Query: 301 EAEYVKKLRSNAII 314 + ++ A + Sbjct: 276 FQKLKDDIKKGAKV 289 >gi|320105835|ref|YP_004181425.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Terriglobus saanensis SP1PR4] gi|319924356|gb|ADV81431.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Terriglobus saanensis SP1PR4] Length = 645 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 92/284 (32%), Gaps = 14/284 (4%) Query: 47 NGEVITDGDISKRIALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFD 98 N ++I+ D+ ++ L+ + E +K +++LI + L ++ GIT D Sbjct: 87 NDQIISRSDVERQEQQLQAELRQGGAQAGDPAERQKNMLRDLIDQQLLLSRGKELGITGD 146 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 + + +N S ED QG+ FK + I VV+++ Sbjct: 147 TELIRRLDDIRKQNHLDSMEDLEKAARAQGVSFEDFKAQIRNSIITSSVVRDEVSRHLQM 206 Query: 159 LEMEIPANKQKMKNITVREYLIRTV---LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + + K+ ++ +R + D Q + ++ Sbjct: 207 TQADERKYYDAHKDQFAQQEQVRLSEILIPLPADATDAAIAQAQAKAEETAAKIRAGAAF 266 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICD 274 + + + G + L P + + T P T++G + + Sbjct: 267 ADVAKTTSGGPTAAQGGDLGFFKRGGLAPVLEEKTFPLKVGDFTAPIRTRQGFVILQATE 326 Query: 275 KRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ + + +++ Y+ LR +A I Sbjct: 327 HQEAGVPPLAQVDQQVQEAMYQDQMQPALRAYLTHLREDAYIDI 370 >gi|330827221|ref|YP_004390524.1| chaperone surA [Alicycliphilus denitrificans K601] gi|329312593|gb|AEB87008.1| Chaperone surA [Alicycliphilus denitrificans K601] Length = 471 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 98/297 (32%), Gaps = 17/297 (5%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQELIVE 83 + + + I +N E IT+ ++ +R + Q L K ++ LI+E Sbjct: 59 TSPAVRQADYIVAVVNSEPITNNEVRQRAERVAQQLSGQGAAMPPHEVLVKEVLERLILE 118 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 ++ Q ++ GI D VN AR +S ++ L GI F++ L Q + Sbjct: 119 KIQVQLAKEGGIKVDDYAVNQAEQNVARQNDVSVDEMHRRLAADGISKERFREELRNQLL 178 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI----RTVLFSIPDNKLQNQGFVQ 199 V + D + ++E+ Q + + ++ + Sbjct: 179 ALRVRERDVESRVRVSDLEVDQYLQDQQKTAGPGKMEINLGHILVKVPEGASPEEVARRA 238 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT 258 R ++ + +++++ G F + + + + Sbjct: 239 ARAQEVLDKLRAGGDFGVLVQEYSDVPEGSGGGLLGLRPLDRYPELFVTAVQQAAVGSIV 298 Query: 259 NPYVTQKGVEYIAICDKRDLGGE----IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 P + G + + D+ G + ++ + E+ AE ++ LR Sbjct: 299 GPLRSPAGFHILKVVDRSQGGVPTMAVQSHARHILLRVGSGLSERQAAERLEDLRQR 355 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 16/139 (11%), Positives = 45/139 (32%), Gaps = 2/139 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + + L + ++ + +++ G + Sbjct: 328 HARHILLRVGSGLSERQAAERLEDLRQRVLRGQADFATLAREYSQDGSAKDGGDLGWAGP 387 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI-ALKAYLSAQNTPTKI 297 P+FQ L + P V++ GV I + ++R+ + + K+ Sbjct: 388 GRYVPEFQEALNALRPGEISQPVVSRFGVHLIQLLERREAKLTQREQRDMVRDAVREKKL 447 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ ++++ R+ A + Y Sbjct: 448 DEAFTTWIQEARARAYVEY 466 >gi|332288953|ref|YP_004419805.1| peptidyl-prolyl cis-trans isomerase SurA [Gallibacterium anatis UMN179] gi|330431849|gb|AEC16908.1| peptidyl-prolyl cis-trans isomerase SurA [Gallibacterium anatis UMN179] Length = 313 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 109/313 (34%), Gaps = 15/313 (4%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + T ++ + + + + ++ T+NG I + + + L + Sbjct: 1 MKTKWIKFLLLVGCLSLATTGYAVEKVVATVNGTPILNSQVKQA---LGKRADTAANRAA 57 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A+ ++I + L ++ I+ + I+ + Q A GL+ F LD QGIG+ F+ Sbjct: 58 ALDDVIDDMLVQKAIKDAKISVSQQQIQQIMHQIANENGLTYGQFLDALDYQGIGEAKFR 117 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR---------EYLIRTVLFS 186 Q +A Q I V +I ++M N + + + + Sbjct: 118 QQIAHQIIMGQVRNKAISESISVSREQIEKLGKQMYNEAKQKGTLKTVKSPQYLVSHILI 177 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQ 245 + L + ++ + + ++ + G + P+ Sbjct: 178 KTNPLLNDAQAKKQLSSLRSDIIAGKTTFAAAAKTYSKDYLSGANGGSLDWNFPEVYEPE 237 Query: 246 FQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAE 303 FQ++ + + P+ T+ G + + DKRD Q + + + Sbjct: 238 FQSMVKNSKKGVISQPFKTKYGWHILEVVDKRDGDKTKEAYMQKAYQQVVNQQAMEASKD 297 Query: 304 YVKKLRSNAIIHY 316 +VK LR +A I Sbjct: 298 WVKTLRKSADIKI 310 >gi|119474853|ref|ZP_01615206.1| peptidyl-prolyl cis-trans isomerase SurA [marine gamma proteobacterium HTCC2143] gi|119451056|gb|EAW32289.1| peptidyl-prolyl cis-trans isomerase SurA [marine gamma proteobacterium HTCC2143] Length = 440 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 115/317 (36%), Gaps = 15/317 (4%) Query: 8 SLSDFIKLLTTYFVLIIFCI--VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 S I+ LTT ++FC+ + ++ ++ +V+ ++ +R+A + Sbjct: 14 KSSRLIRSLTTLMASLLFCLPTIAAPDSNRGQALDQVIAIVDDDVVLASELQERVAQVVA 73 Query: 66 QKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 E+ + + +LI+E ++ Q ++G+ +N ++ A+ L+ Sbjct: 74 NIQQQGKEVPPLPEIRQSLMDQLILENIQMQLAVRAGVRISDAQLNDSMLRIAQQNQLTL 133 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 + F LD G+ ++ + + + V + + + + EI + + Sbjct: 134 DQFRQALDADGLSYAGTREQIRKEMMLQRVQQGNVNQRVQITDQEITNFLDSDEGAALTA 193 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 R + IP + + AE+ LR+ + + E A+ + + + Sbjct: 194 PDYRMLHTLIPLPSSASSADITAAKVRAEKLYLRVQEGESYEEVLATTPFETT--DLGWR 251 Query: 238 LESDLHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALK--AYLSAQNTP 294 +DL +L + T P + G + + D R G I ++ +++ Sbjct: 252 KAADLPSLIADLTTTMAKDETAEPVQSPSGFHLVKLADSRGEGELIPQAKVRHILLKSSA 311 Query: 295 TKIEKHEAEYVKKLRSN 311 + E LR Sbjct: 312 IRDEAATEALAISLRQQ 328 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 27/290 (9%), Positives = 76/290 (26%), Gaps = 25/290 (8%) Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE--------IEKSGITFDSNTVN 103 T I K + L ++Q+ N + I L E + Sbjct: 150 TREQIRKEMMLQRVQQGNVNQRVQITDQEITNFLDSDEGAALTAPDYRMLHTLIPLPSSA 209 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD--------------VVK 149 A + + W + K Sbjct: 210 SSADITAAKVRAEKLYLRVQEGESYEEVLATTPFETTDLGWRKAADLPSLIADLTTTMAK 269 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 ++ + + + + + ++++ + + Sbjct: 270 DETAEPVQSPSGFHLVKLADSRGEGELIPQAKVRHILLKSSAIRDEAATEALAISLRQQI 329 Query: 210 LRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 + +++ I + G + L +FQ ++ + N+ + P+ +Q G Sbjct: 330 IDGADFGELAREYSEDIGSALEGGDLGWSSPGQLVGEFQKVMDQAEINDISAPFTSQFGW 389 Query: 268 EYIAICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + ++RD ++ + K +++K+R A + + Sbjct: 390 HILQVLERRDKDVTDDIRRNITRNYLHKRKFGDELETWLQKIRDEAYVDF 439 >gi|75674587|ref|YP_317008.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter winogradskyi Nb-255] gi|74419457|gb|ABA03656.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter winogradskyi Nb-255] Length = 301 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 91/307 (29%), Gaps = 47/307 (15%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQKIN 69 ++L+++ + ++ + + ++ + +NG I D++ L Q Sbjct: 14 VRLVSSVLGGCLAAVLLVGTPVHADDANPVLAKVNGSEIRQSDVNLAAEELGPSLAQMDP 73 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 ++ + LI + + E+ + + Sbjct: 74 AAKQENVLSFLIDMKIIAKAAEEKKVENSEDFKKRL------------------------ 109 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + + + ++ ++ + M+ + + +E R +L Sbjct: 110 ------AFARDRLLMDRLLASEGKAALTDSAMKTVYTDASKQITSEQEVHARHILVP--- 160 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 ++ K EE + +K + G + + + P F + Sbjct: 161 --------TEEEAKKVEEELKKGADFAELAKKESKDPGASDGGDLGFFTKEQMVPDFSKV 212 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++P TQ G I + +KR + Q K +AEYV KL Sbjct: 213 AFALEPGKISDPVKTQFGWHIIKVEEKRARKA--PDFDQVKPQIEQFVTRKAQAEYVAKL 270 Query: 309 RSNAIIH 315 R A I Sbjct: 271 RETAKIE 277 >gi|294054384|ref|YP_003548042.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Coraliomargarita akajimensis DSM 45221] gi|293613717|gb|ADE53872.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Coraliomargarita akajimensis DSM 45221] Length = 330 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 113/329 (34%), Gaps = 20/329 (6%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKS----WAMSSRIRTTINGEVITDGDISKRIALL- 63 +S F L+ ++++ C + S + + I GE+IT + + + + Sbjct: 1 MSLFRSLVQLSTLILLPCAAVLSSNGQSVNLQQLGNGIAAIAEGEIITVEQLRREVEPII 60 Query: 64 -----------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH-AR 111 + + ++ + +Q +I + Q E+ G+ + ++ + Q A Sbjct: 61 PRLRVEARTEDEFRTRIDQISREVLQNMIDRIIIVQAAEEKGLLIPQSYIDQEYNQVLAN 120 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 + G F +L QG+ +++ + + + + + + I + K Sbjct: 121 DFGGDRARFLEYLKFQGLTPREYRETIRKRVTVDVMRQQNRKSQSEMSPERIEEFYVRNK 180 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 + + + ++ +++ K + K++ S Sbjct: 181 LRFYQSESMHLRQIILTPMADESITLLRQTAKQVMSDLSEGADFGDTARKYSQDDMRRSG 240 Query: 232 GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYL 288 G ++ +DL + + N + P + + +KRD + ++ + Sbjct: 241 GDWGWIERADLRTELSDAAFSLESGNYSQPIELGGTIFILYCEEKRDEMIQPISEVRDII 300 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + ++++LR+ A + Y+ Sbjct: 301 EDVLVGEIAREAQERWLEELRTKAYVRYF 329 >gi|226327125|ref|ZP_03802643.1| hypothetical protein PROPEN_00990 [Proteus penneri ATCC 35198] gi|225204343|gb|EEG86697.1| hypothetical protein PROPEN_00990 [Proteus penneri ATCC 35198] Length = 312 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 107/301 (35%), Gaps = 14/301 (4%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISKRIALLKLQKI 68 +K T F+ ++ + S ++A +R+ +N V+ + D+++ + +K+ Sbjct: 8 KLMKNWKTLFIGLMITVGAATSSTTFAAQELNRVSAIVNNGVVLESDVNRMLQTVKMNAK 67 Query: 69 N--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 N L + ++ L+++ + Q ++ I V A LS + Sbjct: 68 NAGQEMPDEQVLRQQILERLVMDNIILQMAQQMQIDIPDAAVESTIQGIAAENKLSLDQL 127 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 L GI N ++Q + + + +V N+ + L E+ + ++++ + + Sbjct: 128 KKRLAADGISYNDYRQDIRKEMMLAEVRNNEVRRRITILPQEVDSLAKQIEGQASQRVDL 187 Query: 181 RTVLFSIPDNKLQNQGFVQKRIK---DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 IP ++ ++K + +++ ++ G + Sbjct: 188 NLSHILIPLSENPAPAEIEKAQQVITRIMNQLKNGTDFGKLAATYSADPQALNGGNMGWA 247 Query: 238 LESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 +L F + L + P + G+ I + D R +++ S K Sbjct: 248 SIDELPTLFAKELTNAQKGQIVGPIHSGVGLHIIKVNDIRGGSNTLSVTEVKSRHILLKK 307 Query: 297 I 297 + Sbjct: 308 L 308 >gi|288555301|ref|YP_003427236.1| post-translocation chaperonin [Bacillus pseudofirmus OF4] gi|288546461|gb|ADC50344.1| protein secretion (post-translocation chaperonin) [Bacillus pseudofirmus OF4] Length = 304 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 89/304 (29%), Gaps = 23/304 (7%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K + L + S A S + T++G +T+ + ++ Sbjct: 3 KRMIAAVGLACMTALAACSNDDTATDSNVVVTVDGNEVTEAEFYDKMK--------ERYG 54 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + ++E++ L ++ G+T + + N E + + Sbjct: 55 QATLEEMVQRVLIADAKDELGVTEEEIEEGIENFKGQLNVETDEELLEILDAQFNMTYES 114 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 ++ + P V+ + E + A ++ + + + +L Sbjct: 115 MDDFVEDMIVPPIVLDKLAKSEVNVTEEDKQAYYEENEELYAEQVQASHIL--------- 165 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK- 252 ++ + E +++ G + ++ P+F+ Sbjct: 166 --VEDEETANEVLEKIEAGEDFGELAAEYSMDGSATRGGDLGFFGTGEMVPEFEEAAFGL 223 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 ++ +Q G I + D++ G + + K E ++ L NA Sbjct: 224 EVGEVSDAVESQYGYHIIKVTDRK--SGYEDFADDIEQALIQEQS-KSTEEVLRDLVDNA 280 Query: 313 IIHY 316 I Sbjct: 281 TIDI 284 >gi|221069847|ref|ZP_03545952.1| SurA domain protein [Comamonas testosteroni KF-1] gi|220714870|gb|EED70238.1| SurA domain protein [Comamonas testosteroni KF-1] Length = 475 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 99/298 (33%), Gaps = 18/298 (6%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--------QKINGELEKIAVQELIVE 83 + + + I +N E IT+ ++ R+A + EL + ++ LIVE Sbjct: 62 AAQGVRSADYIVAVVNSEPITNNEVRARMARVAQNVTEQGGQLPSQSELARQVLERLIVE 121 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 ++ QE +GI D+ V+ AR S L +GI + F+ + Q + Sbjct: 122 RVQLQEARDTGINVDNLAVDQAVANVARQNSTDRAGLVSRLKAEGISEAQFRAEIRSQML 181 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-----RTVLFSIPDNKLQNQGFV 198 V + D + E +I ++ K ++ + Sbjct: 182 MQRVRERDVDGRVKVTEADIDRYLKEQKRPGEAAAGAAANLGHILITVPENASPAVVEER 241 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 + R K A E+ + P + +F+ + G SD F Q + + Sbjct: 242 EARAKQAAEAARKNPDFIAAVREFSDVPNGQGGGAMGMRAMSDYPELFVQQVGNAAVGAI 301 Query: 258 TNPYVTQKGVEYIAICDKRDLGG----EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 P+ + G + + +K G ++ E A+ ++ + Sbjct: 302 VGPFRSGAGFHVLKVLEKSQSGAPVYITQNHARHILLTVGEGMTEAQAAKRLEDYKRR 359 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 90/285 (31%), Gaps = 18/285 (6%) Query: 46 INGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 ++G V +T+ DI + LK QK GE A L + E + + Sbjct: 190 VDGRVKVTEADIDR---YLKEQKRPGEAAAGAAANLGHILITVPENASPAVVEEREARAK 246 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------FM 153 + AR F D A+ V+ F Sbjct: 247 QAAEAARKNPDFIAAVREFSDVPNGQGGGAMGMRAMSDYPELFVQQVGNAAVGAIVGPFR 306 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 G +++ Q + + + R +L ++ + + Q + + Sbjct: 307 SGAGFHVLKVLEKSQSGAPVYITQNHARHILLTVGEGMTEAQAAKRLEDYKRRVEAGQAT 366 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 ++F+ + G + P+F+ +L +NP V++ GV I + Sbjct: 367 FQ-QLAQEFSKDGSARNGGDLGWSSPGQFVPEFERVLDSLQPGQISNPVVSRFGVHLIQL 425 Query: 273 CDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++R + + K E+ ++K+LR A + Y Sbjct: 426 IERRQEKLTEREQREMVRNVVRERKAEQDYETWLKELRGKAFVEY 470 >gi|302389639|ref|YP_003825460.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermosediminibacter oceani DSM 16646] gi|302200267|gb|ADL07837.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermosediminibacter oceani DSM 16646] Length = 297 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 97/308 (31%), Gaps = 26/308 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 I+ T +++I I+ +++ S S + +NGE I+ ++ + L + Sbjct: 7 IRRKTVTYLIIATAILALIAGCSPGSSKEVVARVNGEEISKDELYDVMVKL--------V 58 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 K A+ L+ + + E +K I + + G Sbjct: 59 GKEALDYLVSQKIIDLEAKKQNINVSEEDIQRELEKVYEYYGGEEAFTQ-----NLQMSG 113 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + +K K E EI + ++ K+ RE +R Sbjct: 114 YSLEEYKKDLAMDIKIKKLLEPKISITEEEIKSYFEENKDNFAREKQVRARHIL------ 167 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK 251 +++ + +++++ G + D+ +F+ Sbjct: 168 ---VENEEKANEVIAKLKSGEDFAELAKQYSTDTATKEKGGDLGFFGRGDMVKEFEEAAF 224 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++P TQ G I + + ++ K + K+++ + ++++L Sbjct: 225 SLKVGEISSPVKTQYGYHIIKVEEIKEAQEANYEESKDKIKDILLNQKVQQEYSTWMQEL 284 Query: 309 RSNAIIHY 316 + Sbjct: 285 YQQYEVEN 292 >gi|322418543|ref|YP_004197766.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18] gi|320124930|gb|ADW12490.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18] Length = 335 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 87/285 (30%), Gaps = 17/285 (5%) Query: 46 INGEVITDGDISKRIALLKLQKINGE---------LEKIAVQELIVETLKKQEIEKSGIT 96 +NG IT +I + +L Q + + A+ +L + L QE K I Sbjct: 49 VNGVAITRAEIERATRVLLSQSGAPQQLPPDAMQKASQAALDQLTMAELLYQEAAKIEIK 108 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 V + + + F L G+ + + ++ F K Sbjct: 109 DLDQQVEKKIAESKA-LYPNPDAFEEALKGSGLTVAEMTRNARKSIMINTFIEKRFASKV 167 Query: 157 GNLEMEIPANKQKMKNIT---VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E Q+ + +L + D Q K +A R++ Sbjct: 168 EVTDAEAQKFYQENQEKYFTRPENARASHILVKVDDKLTAEQKQQAKEKAEALLKRVKGG 227 Query: 214 KDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIA 271 +D + + G + P F+ + ++ +Q G I Sbjct: 228 EDFAAVAKTESGCPSATVGGDLGTFGRGQMVPPFEKAVFAMKPGEISSVVESQFGFHIIK 287 Query: 272 ICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + +K + G K + ++ K +V +L+S A I Sbjct: 288 LVEKHEAGKVSYEEAKTKIFEYLKAERVRKEVTSFVDELKSKAKI 332 >gi|71281900|ref|YP_271172.1| peptidyl-prolyl cis-trans isomerase SurA [Colwellia psychrerythraea 34H] gi|122070643|sp|Q47VK0|SURA_COLP3 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|71147640|gb|AAZ28113.1| peptidyl-prolyl cis-trans isomerase SurA [Colwellia psychrerythraea 34H] Length = 433 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 98/308 (31%), Gaps = 16/308 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71 + + I I S ++ R+ +N V+ + +++ + +K Q Sbjct: 4 RIKALLLASSLIITTITSVQAKEELLDRVAAIVNTGVVLESEVNDLLVNIKQQAKKNNQS 63 Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 L + +LI ++L Q ++ GI ++ AR L+ F + Sbjct: 64 LPSDKALRIQVMDKLINDSLLSQMGQRMGIQISDAQLDQTLNNMAREDKLTLAQFRQQVI 123 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 +G +++ + I+ + +V +N + E+ + MK + Sbjct: 124 DEGTSYEKYRENVRIELVSGEVSRNSVRRRIFVSPQEVDNLLKVMKEQSSNNVEYHLGHI 183 Query: 186 SIPDNKLQNQGFVQK---RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 I +Q + R E + + + G + +++ Sbjct: 184 LIEFPADASQEDLAAAKTRATKVVELLNDGSDFAKIAITSSGDANALKGGDLGWKNINEM 243 Query: 243 HPQFQNLLKKSQNN-TTNPYVTQKGVEYIAICDKRD---LGGEIALKAYLSAQNTPTKIE 298 F L+ + P T G + + D R + E +++ + + + Sbjct: 244 PTLFSELINDKPKDTIVGPIRTGLGYSIVKVLDIRGRKVVEVEEVKASHILIKPSIILSD 303 Query: 299 KHEAEYVK 306 + ++ Sbjct: 304 EKAKSLLQ 311 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 38/137 (27%), Gaps = 2/137 (1%) Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + P L ++ + ++ + V G + + Sbjct: 292 HILIKPSIILSDEKAKSLLQGFLNQIDAGEATFEELAKEHSEGPTSVRGGDLGWADPKNY 351 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKH 300 P F + L + P+ + G I + D+R + + K Sbjct: 352 DPAFTEALATMKKGGYHKPFRSSFGWHIIKLEDRRMVDATSQLNENRAYQILFNRKYGME 411 Query: 301 EAEYVKKLRSNAIIHYY 317 ++K+ R A I + Sbjct: 412 STRWLKETRDEAYIEIF 428 >gi|332798476|ref|YP_004459975.1| Foldase protein prsA [Tepidanaerobacter sp. Re1] gi|332696211|gb|AEE90668.1| Foldase protein prsA [Tepidanaerobacter sp. Re1] Length = 300 Score = 117 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 26/319 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + S + + + IN EVIT ++ + Sbjct: 1 MRTILIKHKKFLASIIVLSLAIPLILSACNTSTSAKKADNNVVARINDEVITRDELYDAL 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 E + LI + + E +K IT V + A G Sbjct: 61 V--------QENGDAVLNSLIANKIVELEAKKQNITVSEEDVQKEVDKLAEQYGGEEALT 112 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + VK E EI + + K + Sbjct: 113 QFLE-----MYGYSLDEIKENIKMNLNVKKLLEPTIKIEESEIKSYFDENKASFDTPEQV 167 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLE 239 + +++ K+ ++ + +++ + G+ Y + Sbjct: 168 KASHIL---------VDTEEKAKEVKQKLQDGEDFAELAKTYSTDTSNNQQGGELGYFSK 218 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTK 296 + P+F+ ++P T+ G I + DK++ K + K Sbjct: 219 GQMTPEFEEAAFSLKAGEISDPVKTEFGYHIIKVEDKKEAKEATYEESKDEVKNILLEEK 278 Query: 297 IEKHEAEYVKKLRSNAIIH 315 + + ++++ I Sbjct: 279 LSTAFSTWIQEKFGEYKIE 297 >gi|304311712|ref|YP_003811310.1| Peptidyl-prolyl cis-trans isomerase [gamma proteobacterium HdN1] gi|301797445|emb|CBL45665.1| Peptidyl-prolyl cis-trans isomerase [gamma proteobacterium HdN1] Length = 439 Score = 117 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 35/278 (12%), Positives = 91/278 (32%), Gaps = 16/278 (5%) Query: 50 VITDGDISKRIALLKLQKIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 +I ++ R +++Q +L+ ++ +I E+ + Q EK G+ D N Sbjct: 48 IILQSELLNRTRQIRIQIAKRGTEAPDEAKLQAQVLERMITESAELQLAEKMGVRVDDNA 107 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQG-IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +N AR LS E F + ++ + + +++ + + + + + + Sbjct: 108 INEALANIARQNNLSLEQFQNVIEHEEGMTFASYREQVRREMTAHQLQQRRVASRIKISD 167 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +I A I + + + + A+E +L + Sbjct: 168 QDIDAFLASDLGKENLAPDYHLGHILIAVHDDSDAASIDQAKAMADEVYRQLKSGADFAA 227 Query: 221 ---KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276 +++ + G + L F +++ + + P + G I I + R Sbjct: 228 TAVRYSGDDKALEGGDLGWRKAGQLPTLFADVVVNMHRGDISAPIRSPSGFHIIKILETR 287 Query: 277 DLGGEIALKAYLSAQNT---PTKIEKHEAEYVKKLRSN 311 + +A + + + + +R Sbjct: 288 GGTEMLVPQAQVRHILIKPNEIRSDADAHALAEDIRRR 325 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 13/138 (9%), Positives = 45/138 (32%), Gaps = 3/138 (2%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 + P+ + + + ++ + G ++ Sbjct: 300 RHILIKPNEIRSDADAHALAEDIRRRLQQNKGDFAALAKTYSDDTGSALEGGSLGWVNPG 359 Query: 241 DLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIE 298 + P+F+ ++ + + P+ TQ G + + ++R + K + Sbjct: 360 VMVPEFEKVMNSEKIGTISQPFRTQFGWHILEVTERRKQDMTSEFKRNRARQMLFKRKFD 419 Query: 299 KHEAEYVKKLRSNAIIHY 316 + A +++++R +A + Sbjct: 420 EDLATWLREVRQDAYVEI 437 >gi|114331215|ref|YP_747437.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas eutropha C91] gi|114308229|gb|ABI59472.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas eutropha C91] Length = 424 Score = 117 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 109/289 (37%), Gaps = 17/289 (5%) Query: 40 SRIRTTINGEVITDGD----ISKRIALLKLQKIN----GELEKIAVQELIVETLKKQEIE 91 RI +N EVIT + + I L+ Q I LEK ++ LI++ ++ Q + Sbjct: 21 DRIVAVVNEEVITQQETNELLQNTIQQLQKQNIQLPSMEVLEKQLLERLIIKRIQLQRAK 80 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 + G++ N ++ + ++ L+ ++F L ++G + F+ + + + + + + Sbjct: 81 EVGLSVSDNDLDQTLRRIVQDNHLTMDEFRQVLLQEGTNLSLFRDEIRDEILMSRLKEQE 140 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + E EI + N R + ++ ++ + R K AE + Sbjct: 141 INSRVNVTESEIDNFLENQANSPAANEEYRIAHILVQTSEQMDEAQINTRHKRAEAAYED 200 Query: 212 LPKDCNKL---EKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGV 267 L + + +++ + G+ + + P + LL+ T + G Sbjct: 201 LRQGISFAQVSAEYSDATDAMQGGELGWRPLGQIGSPFAELLLQMQPGEITPVVRSPIGF 260 Query: 268 EYIAICDKRDLG-----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + ++R E ++ + + E+ + + ++ Sbjct: 261 HILKLLERRQQEKSVTIIEQTHAQHILIKVSEIISEEDAHQLIDQIMER 309 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 29/274 (10%), Positives = 76/274 (27%), Gaps = 9/274 (3%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 +T+ +I + + E L+ + + E + + + Q Sbjct: 147 VTESEIDNFLEN-QANSPAANEEYRIAHILVQTSEQMDEAQINTRHKRAEAAYEDLRQGI 205 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND------FMLKYGNLEMEIP 164 +SAE + QG +++ + + Sbjct: 206 SFAQVSAEYSDATDAMQGGELGWRPLGQIGSPFAELLLQMQPGEITPVVRSPIGFHILKL 265 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 +++ + I +++ ++ + I E + + Sbjct: 266 LERRQQEKSVTIIEQTHAQHILIKVSEIISEEDAHQLIDQIMERIHNGADFMEMAKAHSE 325 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 + G ++ D P+F+ + + P T G I + ++R Sbjct: 326 DASASAGGDLGWVSPGDTVPEFEQAMNALLPGQISQPVRTSFGWHLIKVIERRSQDVSEQ 385 Query: 284 LKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K + E++++LR A + Y Sbjct: 386 KQRETARKTIHARKADAVTQEWLQQLRDQAYVEY 419 >gi|294012540|ref|YP_003546000.1| peptidyl-prolyl cis-trans isomerase SurA [Sphingobium japonicum UT26S] gi|292675870|dbj|BAI97388.1| peptidyl-prolyl cis-trans isomerase SurA [Sphingobium japonicum UT26S] Length = 461 Score = 117 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 88/256 (34%), Gaps = 10/256 (3%) Query: 44 TTINGEVITDGDISKRIALLKLQK-------INGELEKIAVQELIVETLKKQEIEKSGIT 96 +NG +IT D+ +R+AL+ L ++ LI ETL+ QE + I Sbjct: 73 AIVNGRIITGTDVDQRLALIITANGGKVSDEEKERLRVQVLRNLIDETLQIQEAAANDIK 132 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 D ++ + + A N S F +L +QG K+ + + W +++ + Sbjct: 133 VDKAEIDQSYERVAANFRQSPAQFDQYLRQQGSSSASIKRQIEGELAWSRLLRRNIQPFV 192 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 E E+ + +M + ++ + Q Q R + + + Sbjct: 193 NVSEDEVKSVVDRMNAAKGSDEFRIGEIYLSATPENQQQIIANAR--NIIDQIKQGGSFA 250 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275 +F+ G ++ L + + P GV I + DK Sbjct: 251 AYARQFSEASTAAVGGDLGWVRPVQLPDELAQAAAEMQVGQIAGPIGVPGGVSIIYVMDK 310 Query: 276 RDLGGEIALKAYLSAQ 291 R + A LS + Sbjct: 311 RKVLTADPRDALLSLK 326 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 3/87 (3%) Query: 233 KAQYLLESDLHPQFQNLL-KKSQNNTTNPYVT-QKGVEYIAICDKRDLGGEI-ALKAYLS 289 + DL PQ Q++L T P+ + GV + +C + + + Sbjct: 374 DNDNVKLRDLPPQLQDILLNLQVGEATPPFGSINDGVRVLVVCGRDEASSAAAPNAEQIM 433 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 AQ ++ K Y++ LR +A+I Y Sbjct: 434 AQLEEERVNKRARIYLRDLRRDAVIDY 460 >gi|240113831|ref|ZP_04728321.1| putative cis-trans isomerase [Neisseria gonorrhoeae MS11] gi|240118789|ref|ZP_04732851.1| putative cis-trans isomerase [Neisseria gonorrhoeae PID1] gi|240126540|ref|ZP_04739426.1| putative cis-trans isomerase [Neisseria gonorrhoeae SK-92-679] gi|240129002|ref|ZP_04741663.1| putative cis-trans isomerase [Neisseria gonorrhoeae SK-93-1035] gi|260439674|ref|ZP_05793490.1| putative cis-trans isomerase [Neisseria gonorrhoeae DGI2] Length = 332 Score = 117 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 88/292 (30%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIEK 92 S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q ++ Sbjct: 55 SDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGKR 114 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ Q+ LS LA I V + Sbjct: 115 RNIQASEAEIDAVVAQNPALKNLSPTQRR---------------ELADNIIAEKVRQQAV 159 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 160 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 219 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 220 DQARNGTDFAGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 279 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD E ++ + K + ++ L S A + Sbjct: 280 GWHIIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVDI 331 >gi|189425796|ref|YP_001952973.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter lovleyi SZ] gi|189422055|gb|ACD96453.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter lovleyi SZ] Length = 335 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 32/289 (11%), Positives = 90/289 (31%), Gaps = 15/289 (5%) Query: 43 RTTINGEVITDGDISKRIALLKLQ--------KINGELEKIAVQELIVETLKKQEIEKSG 94 +NG I D+ K + E+++ + +++ L Q + + Sbjct: 46 VARVNGVAIPAADLQKALNAFSKSPSAAQVPPGKEKEVQQFLLNQMLGGELMYQVAKATP 105 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 + ++ + + E +QG+ + ++ + I + ++ + Sbjct: 106 VKDLDKKIDDAVTKLKARFKTNDEYLQGL-KEQGLSEKDLRELIRRNVIIENHIEQVIVP 164 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 K + E+ K + +R I + +K + E+ ++ Sbjct: 165 KQVVTDAEMKEFYDKNPETFTQPEQVRASHILITLDAKATDADKKKAKEKIEDLLKQVKA 224 Query: 215 DCNKLE---KFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYI 270 + + + + G Y + + F+ + + TQ G I Sbjct: 225 GADFAKLAQENSGCPSSKQGGDLGYFGKGQMVKPFEETAFAMKPGDVSGVVETQFGYHII 284 Query: 271 AICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + +K+ +KA ++ K+ + ++ + A I + Sbjct: 285 KLTEKKAAAKVAFDEVKAKIADSLKRKKVTEAINATLEDAKKKAKIEVF 333 >gi|332994413|gb|AEF04468.1| survival protein surA [Alteromonas sp. SN2] Length = 426 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 101/312 (32%), Gaps = 15/312 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING---- 70 + L++ ++ SY M R+ ++ V+ ++ + +K Sbjct: 1 MKFIIRALLVSAVLSFSSYAQEVMLDRVAVIVDQGVVLQSEVDALMNDVKRNAEANGQDL 60 Query: 71 ----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 L A++ LI ++L+ Q ++ GI + A N + ++ L Sbjct: 61 PSDRALRTQAIERLITKSLQLQMAQRMGIQISDPQLEQTIANIAANQNTTVDELRRQLRL 120 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 +GI +++ + + + +V + + + + E + M+ + R Sbjct: 121 EGIAYEDYREDIREEIVMGEVRRANVRRRVYITDQERETLIELMEQQGAEQEEYRLGHIL 180 Query: 187 IPDNKLQNQGFVQKRIKDAEE---SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 I + + + A++ +S + G +L + + Sbjct: 181 IGFPSDPSDEQIDAARERADKVLSLLNSGSDFAKIAIASSSGNEALEGGDMGWLNINAMP 240 Query: 244 PQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEK 299 F ++ ++ P + G + + D R + E ++ + + E Sbjct: 241 TLFAEAIQGKAKDELVGPIRSGAGFHILKVLDTRGIEKVTIEEVNSRHILVKPSIILSED 300 Query: 300 HEAEYVKKLRSN 311 + K R+ Sbjct: 301 KAKAMLVKFRAQ 312 Score = 77.4 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 46/139 (33%), Gaps = 3/139 (2%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238 + P L +K + + + ++ + + G+ + Sbjct: 285 NSRHILVKPSIILSEDKAKAMLVKFRAQLEAGEVEFEDLAKEHSEDPGSALKGGELGWSD 344 Query: 239 ESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTK 296 ++ P F++ + S ++P + G I + D+R D E + K Sbjct: 345 PNNYVPAFKDALAQLSAGEYSDPVRSVHGWHLIQLIDRRVDDATERRKEDKAYQLIFNRK 404 Query: 297 IEKHEAEYVKKLRSNAIIH 315 + +++++R A I Sbjct: 405 FAEETENWLREMRDAAYIE 423 >gi|148262224|ref|YP_001228930.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter uraniireducens Rf4] gi|146395724|gb|ABQ24357.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter uraniireducens Rf4] Length = 310 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 88/312 (28%), Gaps = 51/312 (16%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSR-----IRTTINGEVITDGDISKRIA----LLK 64 KLLT + S+ + +NG VIT D +K + LK Sbjct: 8 KLLTIALCVTALFGCKAKVGSEAGKESQKKSGQVLAEVNGSVITTSDYNKELETLPPYLK 67 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 E +K + +IV L Q+ +K GI + Sbjct: 68 PMTETPEGKKELLDTMIVRELILQQADKDGIDKSQAVADKL------------------- 108 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 L + + +K + + E+ K K+ ++ Sbjct: 109 -----------ADLKKRVVVEAFLKKKVEEEAKISDTELQDFYNKNKDKFKTGEQVKASH 157 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + ++ + +K + G + + + P Sbjct: 158 ILVKTEPEA---------QEILKQLKAGGNFDELAKKHSIDAAAAKGGDLGWFGKGAMLP 208 Query: 245 QFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHE 301 F+ + + + T+ G I + KR G +K L A P K ++ Sbjct: 209 DFEKAVFGLKEGAISGVVKTKFGYHIIKLTGKRPAGIRPFDEVKDQLKAAILPEKQQEVF 268 Query: 302 AEYVKKLRSNAI 313 + + L+ +A Sbjct: 269 KKLKEDLKKSAK 280 >gi|299132839|ref|ZP_07026034.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Afipia sp. 1NLS2] gi|298592976|gb|EFI53176.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Afipia sp. 1NLS2] Length = 298 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 50/319 (15%), Positives = 92/319 (28%), Gaps = 49/319 (15%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---S 57 MT T+ + + LL+T + + + + A + + +NG I D+ Sbjct: 1 MTLPTRTTSAVRLGLLSTA--ALCMAMTLMAAQPLRADDNPVLAKVNGSEIRQSDVTAAE 58 Query: 58 KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 K I Q + VQ LI L + E I + Sbjct: 59 KDIGPSLAQLDPASRQASVVQLLIDLKLVAKAAEDKKIADTPDFKQKL------------ 106 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 + + + ++ + + ++ + + +E Sbjct: 107 ------------------AFTRSRLLMDTLLDQEGKAAVTDAALKKVYDDAAKQISGEQE 148 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 R +L + K+ + +K + G Y Sbjct: 149 VHARHILVG-----------TEAEAKEIIAELKKGADFAELAKKKSKDPGASDGGDLGYF 197 Query: 238 LESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 + + P+F + P +Q G I + DKR + Q Sbjct: 198 TKDQMVPEFSAAAFALEPGKISEPVKSQFGWHVIKVEDKRARKA--PPFEQVKPQLEAFV 255 Query: 297 IEKHEAEYVKKLRSNAIIH 315 I K +AEYV KLRS+A I Sbjct: 256 IRKAQAEYVAKLRSDAKIE 274 >gi|239999806|ref|ZP_04719730.1| putative cis-trans isomerase [Neisseria gonorrhoeae 35/02] gi|240014962|ref|ZP_04721875.1| putative cis-trans isomerase [Neisseria gonorrhoeae DGI18] gi|240017410|ref|ZP_04723950.1| putative cis-trans isomerase [Neisseria gonorrhoeae FA6140] gi|240116565|ref|ZP_04730627.1| putative cis-trans isomerase [Neisseria gonorrhoeae PID18] gi|240122031|ref|ZP_04734993.1| putative cis-trans isomerase [Neisseria gonorrhoeae PID24-1] Length = 332 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 88/292 (30%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIEK 92 S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q ++ Sbjct: 55 SDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGKR 114 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ Q+ LS LA I V + Sbjct: 115 RNIQASEAEIDAVVAQNPALKNLSPTQRR---------------ELADNIIAEKVRQQAV 159 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 160 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSKNAAVGAESTIRKIY 219 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 220 DQARNGTDFAGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 279 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD E ++ + K + ++ L S A + Sbjct: 280 GWHIIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVDI 331 >gi|227357298|ref|ZP_03841655.1| chaperone SurA protein [Proteus mirabilis ATCC 29906] gi|227162561|gb|EEI47550.1| chaperone SurA protein [Proteus mirabilis ATCC 29906] Length = 445 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 44/322 (13%), Positives = 123/322 (38%), Gaps = 23/322 (7%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSW-----AMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 KL+ + L+I ++ + + S +R+ +N V+ + D+++ + +++ Sbjct: 8 KLMKNWKTLVIGLMITVGAATSTTTFAAQELNRVSAIVNNGVVLESDVNRMLQTVQMNAK 67 Query: 69 N--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 N L + ++ L+++ + Q ++ I V A L+ E Sbjct: 68 NAGQEMPDEQVLRQQILERLVMDNIILQMAQQMQIDIPEAAVESTIQGIAAENNLTLEQL 127 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 L GI N ++Q + + + +V N+ + L E+ + +++++ + + Sbjct: 128 KKRLAADGIAYNDYRQDIRKEMMLAEVRNNEVRRRITILPQEVDSLAKQIESQASQSIDL 187 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYL 237 IP ++ + ++K + + +L + +++ ++ G + Sbjct: 188 NLSHILIPLSENPSPAEIEKAQQVVNRIKNQLKNGADFGKLAATYSADPQALNGGNMGWA 247 Query: 238 LESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQN 292 +L F + L + P + G+ I + D R + ++ ++ Sbjct: 248 SIDELPTIFAKQLANAQKGEIVGPLQSGVGLHIIKVNDIRGASKTVSVTEVKARHILLKS 307 Query: 293 TPTKIEKHEAEYVKKLRSNAII 314 +P ++ ++K+ +A I Sbjct: 308 SPIMNDEQAYAKLQKI--SADI 327 Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 51/138 (36%), Gaps = 3/138 (2%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 + + ++ K K + + R + ++++ + G+ + + Sbjct: 301 RHILLKSSPIMNDEQAYAKLQKISADIRSGKISFADAAKEYSEDPGSALRGGELGWSMPD 360 Query: 241 DLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE 298 P F++ ++ ++N + P + G I + D R + + A K K Sbjct: 361 IYDPAFRDALMRLNKNELSQPVRSNFGWHLIELEDTRSVDKTDAANKEQAYRLLFNRKFN 420 Query: 299 KHEAEYVKKLRSNAIIHY 316 + ++++LR+ A + Sbjct: 421 EEVQNWMQELRAGAYVKI 438 >gi|307294654|ref|ZP_07574496.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingobium chlorophenolicum L-1] gi|306879128|gb|EFN10346.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingobium chlorophenolicum L-1] Length = 461 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 86/256 (33%), Gaps = 10/256 (3%) Query: 44 TTINGEVITDGDISKRIALLKLQK-------INGELEKIAVQELIVETLKKQEIEKSGIT 96 +NG +IT D+ +R+AL+ L ++ LI ETL+ QE + I Sbjct: 73 AIVNGRIITGTDVDQRLALILTANGGKVSDEEKERLRVQVLRNLIDETLQIQEAAANDIK 132 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 D ++ + + A N S F +L QG K+ + + W +++ + Sbjct: 133 VDKAEIDQSYERVAANFRQSPSQFDQYLRAQGSSSASIKRQIEGELAWSRLLRRNIQPFV 192 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 E E+ + + + +NQ + ++ E + Sbjct: 193 NVSEDEVK--SVVDRMNAAKGSDEYRIGEIYLSATPENQQQIVANARNIIEQIKQGGSFA 250 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275 +F+ G ++ + L + + P GV I + DK Sbjct: 251 AYARQFSEASTAAVGGDLGWVRPAQLPDELAQAAAEMQVGQLAGPIAVPGGVSIIYVMDK 310 Query: 276 RDLGGEIALKAYLSAQ 291 R + A LS + Sbjct: 311 RKVLTADPRDALLSLK 326 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 3/87 (3%) Query: 233 KAQYLLESDLHPQFQNLL-KKSQNNTTNPYVT-QKGVEYIAICDKRDLGGEI-ALKAYLS 289 + DL PQ Q++L T P+ + GV + +C + + + Sbjct: 374 DNDNVKLRDLPPQLQDILLNLQVGEATPPFGSISDGVRVLVVCGRDEASSAAAPNAEQIM 433 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 AQ ++ K Y++ LR +A+I Y Sbjct: 434 AQLEEERVNKRARIYLRDLRRDAVIDY 460 >gi|291042915|ref|ZP_06568656.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae DGI2] gi|291013349|gb|EFE05315.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae DGI2] Length = 333 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 88/292 (30%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIEK 92 S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q ++ Sbjct: 56 SDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGKR 115 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ Q+ LS LA I V + Sbjct: 116 RNIQASEAEIDAVVAQNPALKNLSPTQRR---------------ELADNIIAEKVRQQAV 160 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 161 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 220 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 221 DQARNGTDFAGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 280 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD E ++ + K + ++ L S A + Sbjct: 281 GWHIIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVDI 332 >gi|255264369|ref|ZP_05343711.1| ppic-type ppiase domain protein [Thalassiobium sp. R2A62] gi|255106704|gb|EET49378.1| ppic-type ppiase domain protein [Thalassiobium sp. R2A62] Length = 404 Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 94/278 (33%), Gaps = 7/278 (2%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 ++ + LI+ + + S I +N EVIT ++ +R LL + + G L Sbjct: 1 MRRILLGLALILTSLTTAPAMAQGLFSPAII--VNDEVITRYELDQRAKLLGVLRTPGNL 58 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++A ++LI + LK + I +G+ + + A L F+ L++ G+ Sbjct: 59 SELAQEQLIEDRLKARLIRNAGLQLTGDGLQQALSDFAGRANLDLATFTQVLNQNGVEQE 118 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + +A W + ++ + + + EI LI ++ + Sbjct: 119 TLRDLVATGVSWREYIRTRYGNRAQITDNEIDRALSSTGGRAGIRVLISEII----MDAR 174 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-K 251 + + + + + + G+ +L SDL P Q ++ Sbjct: 175 PQVATSAQARAERISKLTSTAAFSAEARRVSLLPSRENGGRLDWLPLSDLPPTVQPIILN 234 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 S T P + + + + + Sbjct: 235 LSPGEITPPLPIPNALALFQLRAIEETSVTPPTYSAIE 272 Score = 44.7 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 30/84 (35%), Gaps = 4/84 (4%) Query: 237 LLESDLHPQFQNL-LKKSQNNTTNPYVTQKG--VEYIAICDKRDL-GGEIALKAYLSAQN 292 L +D+ K + G + ++ +C + GG + + Q Sbjct: 320 LPPADIPQDVAFELAKLDPGEISTVLTRSNGETLVFLMLCGRTPELGGAEVNREGVRDQL 379 Query: 293 TPTKIEKHEAEYVKKLRSNAIIHY 316 ++ + + +LR++A I + Sbjct: 380 RSRRLNGYADALLSELRADANIRF 403 >gi|240081552|ref|ZP_04726095.1| putative cis-trans isomerase [Neisseria gonorrhoeae FA19] gi|240124329|ref|ZP_04737285.1| putative cis-trans isomerase [Neisseria gonorrhoeae PID332] Length = 332 Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 88/292 (30%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIEK 92 S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q ++ Sbjct: 55 SDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGKR 114 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ Q+ LS LA I V + Sbjct: 115 RNIQASEAEIDAVVAQNPALKNLSPTQRR---------------ELADNIIAEKVRQQAV 159 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 160 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 219 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 220 DQARNGTDFTGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 279 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD E ++ + K + ++ L S A + Sbjct: 280 GWHIIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVDI 331 >gi|194099607|ref|YP_002002738.1| putative cis-trans isomerase [Neisseria gonorrhoeae NCCP11945] gi|268595616|ref|ZP_06129783.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae 35/02] gi|293398076|ref|ZP_06642281.1| peptidyl-prolyl cis-trans isomerase SurA [Neisseria gonorrhoeae F62] gi|193934897|gb|ACF30721.1| putative cis-trans isomerase [Neisseria gonorrhoeae NCCP11945] gi|268549005|gb|EEZ44423.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae 35/02] gi|291611339|gb|EFF40409.1| peptidyl-prolyl cis-trans isomerase SurA [Neisseria gonorrhoeae F62] gi|317165096|gb|ADV08637.1| putative cis-trans isomerase [Neisseria gonorrhoeae TCDC-NG08107] Length = 333 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 88/292 (30%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIEK 92 S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q ++ Sbjct: 56 SDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGKR 115 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ Q+ LS LA I V + Sbjct: 116 RNIQASEAEIDAVVAQNPALKNLSPTQRR---------------ELADNIIAEKVRQQAV 160 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 161 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSKNAAVGAESTIRKIY 220 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 221 DQARNGTDFAGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 280 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD E ++ + K + ++ L S A + Sbjct: 281 GWHIIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVDI 332 >gi|332140206|ref|YP_004425944.1| survival protein surA [Alteromonas macleodii str. 'Deep ecotype'] gi|327550228|gb|AEA96946.1| survival protein surA [Alteromonas macleodii str. 'Deep ecotype'] Length = 427 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 101/312 (32%), Gaps = 15/312 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--- 71 + L++ ++ S + R+ ++ V+ + +I + +K + Sbjct: 1 MKFIIRALMLGALLSFNSIAQEVVLDRVAVIVDQGVVLESEIDALVQEVKRNAAANDQQL 60 Query: 72 -----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 L A++ LI ++L+ Q E+ GI + A N + E + L Sbjct: 61 PSDRALRTQAIERLITKSLQLQMAERMGIRISDPQLEQTIGNIASNQNATVEQLRAQLAA 120 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTV 183 +GI + +++ + + I +V + + + EI ++ L + Sbjct: 121 EGIAYDDYREDIREEIIMGEVRRANVRRRVYITPQEIETLVDLMEQQGAQQAEYRLGHIL 180 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 + P+ ++ ++R +S + G +L + + Sbjct: 181 IGFPPEPTDEDIQAARERADKVIALLESGSDFAKIAIASSSGNEALEGGDMGWLNINAMP 240 Query: 244 PQFQNLLKKSQNN-TTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEK 299 F ++ + P + G + + D R + E ++ + + E Sbjct: 241 TLFAEAIQNKDKDALVGPIRSGAGFHILKVLDTRGIEKVTVEEVNSRHILVKPSIILSED 300 Query: 300 HEAEYVKKLRSN 311 + + + Sbjct: 301 KAKAMLTRFKEE 312 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 18/143 (12%), Positives = 48/143 (33%), Gaps = 4/143 (2%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKA 234 E R +L +++ EE + + + ++ + + G+ Sbjct: 282 EEVNSRHILVKPSIILSEDKAKAMLTRFK-EELKNGEAEFADLAKEHSEDPGSALRGGEL 340 Query: 235 QYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQN 292 + + P+F+ + ++P T G I + D+R D + + Sbjct: 341 GWSDPGNYVPEFKEALSQLEPGEYSDPVRTVHGWHLIQLIDRRMDDATDKRKEDKAYQLI 400 Query: 293 TPTKIEKHEAEYVKKLRSNAIIH 315 K + +++++R A + Sbjct: 401 FNRKFSEETENWLREMRDAAYVE 423 >gi|167646489|ref|YP_001684152.1| SurA domain-containing protein [Caulobacter sp. K31] gi|167348919|gb|ABZ71654.1| SurA domain [Caulobacter sp. K31] Length = 452 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 103/291 (35%), Gaps = 19/291 (6%) Query: 39 SSRIRTTINGEVITDGDISKRIALL-------KLQKINGELEKIAVQELIVETLKKQEIE 91 S + +N ++I+ D+ +R+ LL Q+ +LE+ A++ LI E ++ QE+ Sbjct: 57 SESVAAVVNDDIISSYDLMQRMRLLMVTSGLQPTQENLPQLEQEALRSLIDEHVQMQELR 116 Query: 92 KSGITFD------SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + V A+ L+ + + L QG+G + +K + S W Sbjct: 117 RVEKAQKITIISTDKEVEEQIEDIAKGNNLTGQQLTQQLRAQGVGIDTWKAQIRADSSWQ 176 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + + + + +I A +++ + + +F ++ K Sbjct: 177 AWISGRYGSRLRIGDDQIKAFERRQAEAASKPQYQVSEVFIDA-GRVGGMETAVNGAKQL 235 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQ 264 + +F++ + G A ++ ++ P+ + + + P + Sbjct: 236 VTQMQQGAPFPAVARQFSASPTAANGGDAGWISPGEMPPEVDAAIEQLRPGQLSAPIPVR 295 Query: 265 KGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 GV I + +KR ++ A ++ + + L+ Sbjct: 296 DGVYIIYLREKRSGAKTALVDLKQVALALPKDASQAQVDAANKVLLDLKPK 346 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 2/126 (1%) Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250 K +Q V K + + ++ E A K+ V G +DL P FQ Sbjct: 326 KDASQAQVDAANKVLLDLKPKIVNCETL-EATAGKVEGVVAGDLGEAEITDLAPAFQQAA 384 Query: 251 KK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 ++P T G+ IA+C KR G + + + + ++ Y++ LR Sbjct: 385 NTLKVGQVSDPIRTDAGLHLIAVCGKRQSGAQAPTRDQIENRLRGQQLALISKRYLRDLR 444 Query: 310 SNAIIH 315 ++A I Sbjct: 445 NSATIE 450 >gi|218781644|ref|YP_002432962.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfatibacillum alkenivorans AK-01] gi|218763028|gb|ACL05494.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfatibacillum alkenivorans AK-01] Length = 358 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 98/340 (28%), Gaps = 37/340 (10%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-----SSRIRTTINGEVITDGDISK---------- 58 KL+ V+ + I S ++ +NG IT ++ + Sbjct: 3 KLVMPALVIAMLLAWVIPGAALAEAGADDGSEKVVAVVNGASITQAELDQALMQGMLNAT 62 Query: 59 ---RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---- 111 +++ + Q+ + + +LI++ L QEIEK IT + + Sbjct: 63 KGMQLSPEQAQRFKSQYSGRVLDKLIMDELLSQEIEKRKITAAPGEMAKALSEQLELQLM 122 Query: 112 ---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF----MLKYGNLEMEIP 164 T E+ Q + +++ K + EI Sbjct: 123 ASGRTKKEYEESDLKAKGQTWDQFIAGIAARPEVAHMYLLEKMAKTIAPEKVKVTDAEIR 182 Query: 165 ANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR----LPKDCNKL 219 ++ + +R + + K A+E L+ Sbjct: 183 KFYDDNLESRFTKPEEVRASHILFGTKDAKTAEEKEAIKKQAQEVLLKAKKPGADFAALA 242 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 +++S G + + + P+F + +N TQ G I + DK Sbjct: 243 REYSSCPSKEKGGDLNFFTKERMVPEFSKAAFSMEVGEISNLVETQFGYHIIKVTDKTPA 302 Query: 279 G--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + ++++ L+ A I Y Sbjct: 303 EVRPFESAALAIRKGLETQRVQQELMTLANGLKEKATITY 342 >gi|15603073|ref|NP_246145.1| hypothetical protein PM1208 [Pasteurella multocida subsp. multocida str. Pm70] gi|12721561|gb|AAK03292.1| SurA [Pasteurella multocida subsp. multocida str. Pm70] Length = 311 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 50/317 (15%), Positives = 114/317 (35%), Gaps = 20/317 (6%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K++ + + I + A + R+ T+NG + + + K + Sbjct: 1 MMKMINVKSIFWAILGLFIYVSTAQA-AERVVATVNGVPVLESQVKKNM-------GKKG 52 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 ++A+ ++I + L +Q I+ SGI + V+ A GL+ LD QGI Sbjct: 53 QYQVALDKVIDDILVQQAIQNSGIKVNYAQVDQIIEGIAAQNGLTYGQLLDALDYQGISY 112 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR---------EYLIRT 182 N ++Q +A Q + ++ ++ A ++ N + Sbjct: 113 NAYRQQIANQILMGEIRNQAIGQSIDVTREQVEALSNQLLNQAKQAGTEKKISAPQYEVR 172 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY-LLES 240 + + L + + + + + ++ + G + E+ Sbjct: 173 HILLKLNPLLNDAQAKAQLTQIRADIIAGKMSFADAALHYSKDYLSGANGGSLGFAFPEA 232 Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEK 299 + + +L + + P+ T+ G + + + R+ I + Q +++ Sbjct: 233 YVGAFQKAILTTKKGVISAPFKTEFGWHILEVTNTREGDKTIDVYRQKAYEQLVNQQVKD 292 Query: 300 HEAEYVKKLRSNAIIHY 316 E ++VK LR NA I Y Sbjct: 293 VEKDWVKALRKNAEIRY 309 >gi|119775949|ref|YP_928689.1| survival protein surA [Shewanella amazonensis SB2B] gi|119768449|gb|ABM01020.1| survival protein surA [Shewanella amazonensis SB2B] Length = 434 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 34/310 (10%), Positives = 98/310 (31%), Gaps = 15/310 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK----- 67 +K + + S + R+ +N ++ + +I + +K Sbjct: 1 MKPCKKLIFAALAMTMGFQSLAAPQPLDRVAVQVNDGIVLESEIQNMMDTVKKNALAAGQ 60 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + L ++ LI+ L+ Q E+ G+ ++ AR ++ + Sbjct: 61 TLPSDDALRTQVIERLILTRLQLQMAERVGLHIGDLQLDQAIENIAREQKMTVAQMQQAI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 +G+ +++ L + ++ + + EI + ++ ++ + Sbjct: 121 QAEGMSFAQYREQLREEITLGEIQRIQVQRRIQVSPQEINNLVKMIEEQGNKDVEYQIGH 180 Query: 185 FSIPDNKLQNQGFVQ---KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I ++ KR + + + +S + G Y+ ++ Sbjct: 181 ILIEVPSNPTSAELESASKRAQAVMDRLNSGNDFRSIAIAASSGPKALEGGVWDYMNINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297 + F + + ++ P + G + I D R E ++ + +P Sbjct: 241 MPTLFAEVIGDAKKDAIIGPIKSGSGFHILKIMDIRGLQTREIEEVRARHILLKPSPILS 300 Query: 298 EKHEAEYVKK 307 E+ + + Sbjct: 301 EERAKAMLDQ 310 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 31/292 (10%), Positives = 83/292 (28%), Gaps = 29/292 (9%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 E IT G+I + ++Q E+ + +I E K + G N + Sbjct: 136 EEITLGEIQRIQVQRRIQVSPQEINNLVK--MIEEQGNKDVEYQIGHILIEVPSNPTSAE 193 Query: 109 HARNTGLSAEDFSSFLDKQGIGD----------------NHFKQYLAIQSIWPDVVKNDF 152 + + + + +++ +V+ + Sbjct: 194 LESASKRAQAVMDRLNSGNDFRSIAIAASSGPKALEGGVWDYMNINEMPTLFAEVIGDAK 253 Query: 153 MLKY-------GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + + + ++ + E R +L + + + Sbjct: 254 KDAIIGPIKSGSGFHILKIMDIRGLQTREIEEVRARHILLKPSPILSEERA-KAMLDQFV 312 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVT 263 + + K + +++ G+ + + P+F + + S + + P+ T Sbjct: 313 TQIKSGEAKFADIARQYSEDPGSATKGGELGWAEPNIYVPEFAQMLGQLSLDEISAPFRT 372 Query: 264 QKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 G + + +KR K + ++ ++RS A I Sbjct: 373 AHGWHIVQLEEKRKTDATEKFNTNRAHQLIFRRKFNEELQGWLDEIRSEAHI 424 >gi|319405490|emb|CBI79109.1| Peptidyl-prolyl cis-trans isomerase [Bartonella sp. AR 15-3] Length = 318 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 72/317 (22%), Positives = 121/317 (38%), Gaps = 9/317 (2%) Query: 9 LSDFIKLLTTYFVLIIF---CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 ++ F + + I + + T+NG IT DI +RIA LKL Sbjct: 1 MNILKNSALALFCITFLSVSISISIFFTSQAFAQTSVVVTVNGSAITSYDIQRRIAFLKL 60 Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 Q+ G L A ELI ETLK EI++ I + + F A ++ E S L Sbjct: 61 QQRQGNLAVQAKNELIDETLKNNEIKRRNIEVSKDELESAFENFATQNNMTVEQLSQMLT 120 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + + HFK Y+ Q W +V + + G L + ++ T+ Sbjct: 121 QTDVTVEHFKAYILGQMGWGRLVNARYQAEGGILTEQEAVHRILKNGGVKPSTNEYTLQQ 180 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 I + + ++ + CN + I D++I LE L Sbjct: 181 IIFVIPEHRRSAILEKRIKEANQFRANFRGCNSAKHQVKGILDITIRHLGKFLEPQLPRN 240 Query: 246 FQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK-----IEK 299 ++ + + TN TQ+G+E IA+C + + + + S Q+ K +E Sbjct: 241 WEKAILATPAGKMTNLQETQRGIEAIAVCQIKRVSDDRVARLIFSIQDHQKKDIPQLLEA 300 Query: 300 HEAEYVKKLRSNAIIHY 316 +Y+K+LR A I Sbjct: 301 ISEKYLKELRQTARIQN 317 >gi|268597648|ref|ZP_06131815.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae FA19] gi|268551436|gb|EEZ46455.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae FA19] Length = 333 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 88/292 (30%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIEK 92 S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q ++ Sbjct: 56 SDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGKR 115 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ Q+ LS LA I V + Sbjct: 116 RNIQASEAEIDAVVAQNPALKNLSPTQRR---------------ELADNIIAEKVRQQAV 160 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 161 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 220 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 221 DQARNGTDFTGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 280 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD E ++ + K + ++ L S A + Sbjct: 281 GWHIIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVDI 332 >gi|205375588|ref|ZP_03228375.1| protein secretion (post-translocation chaperonin) [Bacillus coahuilensis m4-4] Length = 301 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 32/300 (10%), Positives = 88/300 (29%), Gaps = 26/300 (8%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 ++ + +V S++ ++GE I+ ++ R+ + + + +I Sbjct: 7 ILAVIALAVVIAMSFSKGGETVAEVDGEKISKEELYDRLV--------EQDQGATLNAMI 58 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 E L +E + G+ +N G + + Sbjct: 59 SEVLIMKEAKDQGVEASDEEINEELETLYGMYGGEEAFTNQIEAS-----GMSLDEVKDD 113 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + + EI K ++ ++ + D + N Sbjct: 114 ITLFIYSNKLMEDRIEVTDEEIQEYFDANKASFDQQEQVKASHILVEDEETAN------- 166 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTN 259 + ++ ++++ G + + + P+F+ + T Sbjct: 167 --EVKQKLDEGGDFAELAAEYSTDTSNASQGGDLGFFGKGQMVPEFEEAAFGAEVGSITG 224 Query: 260 PYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 P T G I + +K++ +K + K ++ ++++L+ I Y Sbjct: 225 PVQTDFGYHIIKVEEKQEAKEATLEDVKEEVRETIKQQKQQQEYPVWIEELKGKHDIKNY 284 >gi|218768937|ref|YP_002343449.1| putative rotamase [Neisseria meningitidis Z2491] gi|121052945|emb|CAM09299.1| putative rotamase [Neisseria meningitidis Z2491] Length = 347 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 87/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 70 SDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 129 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ +++ LS A I V + Sbjct: 130 RNIQASEAEIDAVVAKNSALKNLSPAQRR---------------DFADNIIAEKVRQQAV 174 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 175 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 234 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 235 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 294 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 295 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 346 >gi|322419887|ref|YP_004199110.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18] gi|320126274|gb|ADW13834.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18] Length = 446 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 84/288 (29%), Gaps = 15/288 (5%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGEL---------EKIAVQELIVETLKKQEIEKS 93 +NG VIT + + + ++ Q E E A+ +L L QE K Sbjct: 157 VLRVNGSVITKQALDRAVKVMLAQNQVKEPLSPEAQKEAEAAALDQLTSAELLYQEASKL 216 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + + Q+ AE + + I + + Sbjct: 217 DMPELDKQIEEKVAQNRAKFKTDAEFIEALKSIDMTMQDMQDFTRRDLMINHFIEQKFIA 276 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR-- 211 ++ + + +R + ++ +K + AE R Sbjct: 277 KAVITDAEAKKFYEENLDRYFKKPESVRASHILVGSDEKATPEERKKAKEKAEALLKRVK 336 Query: 212 -LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269 + +S G + P F+ Q T+ ++ G Sbjct: 337 AGEDFAAIAKAESSCPSASQGGDLGTFGRGQMVPAFEKAAFALKQGETSGVVESEFGYHI 396 Query: 270 IAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + +K++ G K ++ K++K Y+ +L+ +A I Sbjct: 397 IKVTEKQEAGAEKFENAKDKIADFLKKQKVQKELISYIDQLKKSAKIE 444 >gi|304413706|ref|ZP_07395150.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Candidatus Regiella insecticola LSR1] gi|304283797|gb|EFL92191.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Candidatus Regiella insecticola LSR1] Length = 434 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 110/309 (35%), Gaps = 16/309 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ I + + + + +N +VI DI + +K +L Sbjct: 7 LILSMVIFTHAGFAASQQTDKSAAIVNSKVILQSDIDTLLQSVKFSAEQADQPIPDEKQL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI+ ++ Q +K G+T + ++ A ++ + S L K+GI Sbjct: 67 RHQIIESLIMNDIQLQMAQKMGMTISESHLDNAIANIAAQNHMTIDQLRSRLAKEGINYQ 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ ++ + +V N+ + L E+ + Q++ T + I + Sbjct: 127 TYRTHIRNEMQISEVRNNEVRRRIKILPQEVESLAQQLAAQTGGNTELNISHILISLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + + K AE+ + D + + +S + G+ + ++L F + Sbjct: 187 ASVQQKDQAEKKAEKIVAEIKSDKSFAKLAIAHSSDSQALKGGQMGWSKLAELPRLFAEQ 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE----IALKAYLSAQNTPTKIEKHEAEY 304 L ++ + P + G + + D R + ++ + + +K Sbjct: 247 LKTANKRDIIGPIRSGVGFHILKVNDIRKADKKISITEMRVRHILLKPSVMMTDKQAQAK 306 Query: 305 VKKLRSNAI 313 ++ +R Sbjct: 307 LQSVRQKIK 315 Score = 75.9 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 32/278 (11%), Positives = 73/278 (26%), Gaps = 13/278 (4%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 I ++ L Q I+ LI +K + + Sbjct: 151 KILPQEVESLAQQLAAQTGGNTELNIS-HILISLPENASVQQKDQAEKKAEKIVAEIKSD 209 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-------FMLKYGNLEME 162 L+ S +G K + + + G ++ Sbjct: 210 KSFAKLAIAHSSDSQALKGGQMGWSKLAELPRLFAEQLKTANKRDIIGPIRSGVGFHILK 269 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + ++ K I++ E +R +L Q K ++ + + Sbjct: 270 VNDIRKADKKISITEMRVRHILLKPSVMMTDKQAQ-AKLQSVRQKIKSGKTDFAAVAREI 328 Query: 223 ASKI-HDVSIGKAQYLLESD--LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + G ++ D L + + P + G I + D R + Sbjct: 329 SEDPGSAQQGGDLGWISPDDRYDPTFLNELASLKKGAISPPVRSSLGWHLIQLIDSRTVD 388 Query: 280 -GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + LK K + +++++R+ A + Sbjct: 389 RTDEMLKEQAYRMLIKRKFSEELQPWMQEIRAAAYVKI 426 >gi|78485996|ref|YP_391921.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomicrospira crunogena XCL-2] gi|121956485|sp|Q31F26|SURA_THICR RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|78364282|gb|ABB42247.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomicrospira crunogena XCL-2] Length = 451 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 98/299 (32%), Gaps = 14/299 (4%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISKRIALLKLQ 66 + I + I+F + P ++ + + R+ +N +I ++ + L K Sbjct: 1 MKKIIPTNLFKLISILFILTPFFAWSAPQETLIDRVVAVVNDNIILKSELDAEVNLAKQD 60 Query: 67 --------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSA 117 EL + ++I+E L+ Q I + GI + + + A+ Sbjct: 61 LQARNIPVTNPEELASKVLDKIILERLQLQRINQLGIKIADDELFSQIQEIAKQNNLTVI 120 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 E Q G F++ + Q ++ + + + + K E E+ Q+ + Sbjct: 121 ELRDRLNMSQKNGFESFRERIRQQMLFQKLREVEVLSKTQVTEDEVSNFIQRQALVQSDV 180 Query: 178 YLIRTVLFSIPDNKL--QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 + + +++ ++ + +++ + G Sbjct: 181 EYHLGHIMVSLPESATPDQRDASKQKAQEILQKIRTGGDFSQMAVRYSEGSKALQGGDLG 240 Query: 236 YLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293 +L + F + + T++ + G I + KR+ +I + +L Sbjct: 241 WLGIDQIPTFFNDALNQLEIGETSDVIRSPVGFHIIQLQGKRNKNSQIVKQYHLYRFIL 299 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 22/167 (13%), Positives = 57/167 (34%), Gaps = 4/167 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + K I + +L R +L S Q ++ ++ S Sbjct: 267 IRSPVGFHIIQLQGKRNKNSQIVKQYHLYRFILLSEDAQNKQQPSPTLVKLAESLNSLES 326 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + K + ++ G + ++ P++ ++ + P+ T+KG + Sbjct: 327 FKQLNEKYSDIPASVNAN--GNLGWQTAKEMSPEYYQAIEALQPGHAAKPFATEKGWVIL 384 Query: 271 AICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + RD + K + ++++L+ A+I Sbjct: 385 FLDGIRDQDLSLKDKRKQAMQTLRMKKANESYEIWLRRLKDEALIDI 431 >gi|288940552|ref|YP_003442792.1| SurA domain-containing protein [Allochromatium vinosum DSM 180] gi|288895924|gb|ADC61760.1| SurA domain protein [Allochromatium vinosum DSM 180] Length = 446 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 38/274 (13%), Positives = 94/274 (34%), Gaps = 15/274 (5%) Query: 53 DGDISKRIALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 ++ + IAL+ Q +L K + LI++ L++Q ++ G+ D T+ Sbjct: 56 QSELEREIALVIPQLNQRGTAIPPPEQLRKQVLDRLILKHLQQQRAKELGLKVDEATLEE 115 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 A GLS ++ + L+ GI F++ Q + + + + K E E+ Sbjct: 116 ALQGIAGRNGLSLDELKATLEAGGIRFEDFREDTRSQILSSRLQNQEVVRKIQVSEPEVD 175 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE---K 221 + + + +R I + V++ A+ RL + + Sbjct: 176 RFLAREASRLIEREQVRLQHILIALPENPTPEQVKRAEDKAKGLVERLRSGADFAAVAVR 235 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + + + G + + + ++ + P + G I + + + Sbjct: 236 ESDGRNALEGGDLGWFEMGAVPSLVSDLAYTLAEGEVSEPLRSPSGFHIIRMREIKAAAP 295 Query: 281 EIALK---AYLSAQNTPTKIEKHEAEYVKKLRSN 311 E + ++ + + + + +LR Sbjct: 296 EDVTQTRARHILIRTNEIVSDADARQRLLQLRER 329 Score = 95.5 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 49/141 (34%), Gaps = 3/141 (2%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 R I N++ + ++R+ E + + + G+ ++ Sbjct: 300 QTRARHILIRTNEIVSDADARQRLLQLRERIIGGEDFAGLARAHSDDTGSALKGGELGWV 359 Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPT 295 P+F+ + + T+ P+ + G + + ++R + + Sbjct: 360 DPGKTVPEFEEQMNALAVGATSEPFKSPFGWHILQVEERRQQSANEDILRLKAREALQRR 419 Query: 296 KIEKHEAEYVKKLRSNAIIHY 316 K E+ E++++LR A + Sbjct: 420 KAEEATEEWLRQLRDEAYVEI 440 >gi|222148150|ref|YP_002549107.1| hypothetical protein Avi_1539 [Agrobacterium vitis S4] gi|221735138|gb|ACM36101.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 315 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 80/291 (27%), Positives = 141/291 (48%), Gaps = 6/291 (2%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 + + + +N IT+ D+++RIA LKL+ G++ K A QELI E LK+ Sbjct: 24 FAPATVTPALADTGVAVVVNKTAITNTDLARRIAFLKLRHETGDVAKKARQELIDEQLKR 83 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 QEI + G++ + V+ F + A + LS + LDK G+G HFK Y+A+Q WP + Sbjct: 84 QEIARVGMSVSTMDVDQAFGRFAASNKLSTQQMGQILDKAGVGVEHFKAYIAVQMSWPRL 143 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 V + + ++ + K V + KR +AE Sbjct: 144 VNARYASRSKMSNQDMVTRLLENKQKPVTTEYT-LKQVIFVVPVAKRATLTAKRKAEAEA 202 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 SR + P ++ FA DVSI +++ +L ++ L++ + TT VT++G+ Sbjct: 203 SRAKFPGC-DQAMDFAKNYLDVSIRDLGRVMKPELPDDWKPLIEGANGTTTGTRVTERGI 261 Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPT----KIEKHEAEYVKKLRSNAII 314 EY+AIC+++ + ++A +A A++ K + + +Y+ +LRS A I Sbjct: 262 EYLAICNQKQVSDDLAAEAVFKAEDIGKEDKSKGDPNSEKYLTELRSKAQI 312 >gi|304320041|ref|YP_003853684.1| peptidyl-prolyl cis-trans isomerase family protein [Parvularcula bermudensis HTCC2503] gi|303298944|gb|ADM08543.1| peptidyl-prolyl cis-trans isomerase family protein [Parvularcula bermudensis HTCC2503] Length = 421 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 111/306 (36%), Gaps = 12/306 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K L +V +I + + + R+ +N + I+ D+ +RI L+ + + L Sbjct: 1 MKRLAILWVTLILTGLTAP-LANAQVGERVAAVVNDDPISTFDVRQRIQLIIVTEGMRNL 59 Query: 73 EKIAVQE--------LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + A+ + LI E LK QE E+ +T ++ Q A G + + + L Sbjct: 60 PQEALAQLQGRALRELIEERLKLQEAERFELTIPDEAIDAELEQLAGQAGTTVQQLTEDL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 G+ + + + W +V+ + + + + ++ + + + + Sbjct: 120 ATAGVNIGTLRDRIQAEQAWQQLVRGRYGPRVSITDDAVETMLDDLELSARSDQYLISEI 179 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + ++Q + + E R +++++ G +L +L Sbjct: 180 CLPVT-RQEDQPEMYQAGMQMIEQLRRGVPFGALAQQYSACSSAARGGDLGWLRADELDQ 238 Query: 245 -QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD-LGGEIALKAYLSAQNTPTKIEKHEA 302 + + S+ N + P + ++ +A+ R+ A + E+ Sbjct: 239 TTLDIVQQLSEGNVSRPIPLRGVIKIVALRQTREAATAGEPSYQVAYAGAPASLGEEVAK 298 Query: 303 EYVKKL 308 + + +L Sbjct: 299 QRLARL 304 >gi|189345572|ref|YP_001942101.1| SurA domain [Chlorobium limicola DSM 245] gi|189339719|gb|ACD89122.1| SurA domain [Chlorobium limicola DSM 245] Length = 437 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 38/274 (13%), Positives = 92/274 (33%), Gaps = 11/274 (4%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN---- 69 K++TT LI+ C+ I A++ RI I EV+ ++ +R+ + +Q Sbjct: 3 KVMTTVCALILLCMPFISGTAVAAIADRIVAVIGNEVVLQSELDERVLMTHMQYPESKGD 62 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 L + + LI + + + + D + + + + G Sbjct: 63 KTLPEKVLNSLIDQKVILAKAKIDSTGIDDAALEGLVGERMKVLASRFSSREEMESRFGK 122 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLK-----YGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ L + ++++ K + E K + + E + + + Sbjct: 123 SSLVIRRELRQEIKNQQLIESLRRKKLSGVTVTHEESMAFYEANKSRLPVIPEGVSVSQI 182 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLH 243 PD +++ + I+ + +K++ G Y+ + +L Sbjct: 183 LKYPDVTAESRSGAKAMIEKVQAELKGGADFGALAKKYSQDPGSAQLGGDLGYVQKGELI 242 Query: 244 PQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276 F+N + + T+ G I + +K Sbjct: 243 QSFENAAYGLKEGQVSGVVETRYGFHLIQLLNKE 276 Score = 45.1 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 46/159 (28%), Gaps = 16/159 (10%) Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVS 230 N V +R +L + ++ G + + K++ Sbjct: 274 NKEVNSLHVRHILVAFDRSRSDAAGTIGLLRSIRADVLAGKATFAEMAGKYSDDPVSARL 333 Query: 231 IGKA------QYLLESDLHPQFQNLLK--KSQNNTTNPYVT--QKG---VEYIAICDKRD 277 G S L PQ + ++ K + + P +G + +K Sbjct: 334 GGAILSASSKNVFQLSTLRPQLREVIGTLKQSGDISEPVKVDPPQGDSFYAIFRLNEKIG 393 Query: 278 LGGEIALKAY--LSAQNTPTKIEKHEAEYVKKLRSNAII 314 + Y L K ++ E++++LR + Sbjct: 394 SHQLNPRQDYALLEEIVLENKRQRLYEEWLQELRKEITV 432 >gi|110634111|ref|YP_674319.1| putative survival protein surA precursor (peptidyl-prolyl cis-trans isomerase SurA) [Mesorhizobium sp. BNC1] gi|110285095|gb|ABG63154.1| putative survival protein surA precursor (peptidyl-prolyl cis-trans isomerase SurA) [Chelativorans sp. BNC1] Length = 312 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 3/281 (1%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 ++ IR +N IT DI +R ALL+L + G + ++A +E+I +TL++QE+ +SG+ Sbjct: 30 PVDATEIRYVVNDRPITSFDIERRAALLRLMQRKGNVNELAAEEMIDQTLRQQEMARSGV 89 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 V+ + A + ++ L + G+G HFK+++ Q W V+++ Sbjct: 90 NITQAMVDESYRNFAGSNNMTVAQLDQILGQAGVGKEHFKEFIRTQIGWGRVMQSRSRSG 149 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 E ++ + Q + KR ++A+ R R Sbjct: 150 TILSEQDVVQKMLQQGGQKPTATEYMLQQVIFVVPAAQRGQLLAKRKREAQAMRDRFNGC 209 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY-VTQKGVEYIAICD 274 N + +FA + DV++ +L +L P++++ + ++ P T++GVE+I IC Sbjct: 210 ANTV-QFAKGLIDVTVRDMGRVLAPELPPEWKDQISNTRPGNATPIRETERGVEFIGICS 268 Query: 275 KRDLGGEIALKAYLS-AQNTPTKIEKHEAEYVKKLRSNAII 314 R++ + + Q E EY+ +LR A I Sbjct: 269 AREVSDDHVARMVFQSQQAGDGSFEDAAKEYMAELRKKARI 309 >gi|209883242|ref|YP_002287099.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oligotropha carboxidovorans OM5] gi|209871438|gb|ACI91234.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oligotropha carboxidovorans OM5] Length = 301 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 85/298 (28%), Gaps = 47/298 (15%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQKINGELEKIAVQ 78 + +++ A +++ +NG I D++ L Q + V+ Sbjct: 23 AACCLALTLMAAPLRADDNQVIAKVNGAEIRQSDVTAAEKDLGPSLAQLDPASRQDSIVR 82 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 LI + + E I ++ + Sbjct: 83 FLIDLKIVSKAAEDKKIADSADFKRRL------------------------------TFS 112 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + ++ N+ + ++ + + +E R +L D + Sbjct: 113 RDRLLMDTLLDNEGKAALTDEALKKVYEEASKQISGEQEVHARHILVETEDEAKAIVAEL 172 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNT 257 +K +K + G Y + + P+F Sbjct: 173 KK-----------GADFAELAKKKSKDPGASDGGDLGYFTKDQMVPEFSTAAFALETGKI 221 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++P +Q G I + DKR + Q I K +A+YV KLRS A + Sbjct: 222 SDPVKSQFGWHIIKVEDKRARKA--PPFEQVKPQLEAFVIRKAQADYVAKLRSEAKVE 277 >gi|304389108|ref|ZP_07371152.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis ATCC 13091] gi|304336981|gb|EFM03171.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis ATCC 13091] Length = 348 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 43/292 (14%), Positives = 87/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 71 SDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 130 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ +++ LS A I V + Sbjct: 131 RNIQASEAEIDAVVAKNSALKNLSPAQRR---------------DFADNIIAEKVRQQAV 175 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 176 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 235 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 236 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 295 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A I Sbjct: 296 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYIDI 347 >gi|13476523|ref|NP_108093.1| hypothetical protein mll7863 [Mesorhizobium loti MAFF303099] gi|14027284|dbj|BAB54238.1| mll7863 [Mesorhizobium loti MAFF303099] Length = 310 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 67/312 (21%), Positives = 123/312 (39%), Gaps = 11/312 (3%) Query: 9 LSDFIKLLTTYFVLIIFCI--VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66 + K L + ++ V + A +S I+ +N IT GDI+ R A LKLQ Sbjct: 1 MLMMRKYLFSAGFALLVAATSVSMTVMTPPAFASEIKYVVNDIPITTGDIAHRAAFLKLQ 60 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 + G+ A QE+I +TL+ E + GI V + + A N + ++K Sbjct: 61 RKKGD----AAQEMIDQTLRLAEARRLGIRISDAQVEAAYQRFATNNKMQLGQLDGVMEK 116 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKY--GNLEMEIPANKQKMKNITVREYLIRTVL 184 G+G +HFK+++ Q W + + E + Sbjct: 117 SGVGKDHFKEFIRAQMAWNQALSARYRSGEGGSVTEQDAVRRMLDKGGAKPSATEYMLQQ 176 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + KR ++A+ R R +FA + DV++ +L L P Sbjct: 177 VIFVVPASERSATLAKRKREADAMRARFNGCNTT-REFAKGLIDVTVRDLGRVLAPQLPP 235 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK-IEKHEA 302 + + + T T++GVE+I IC R++ + + ++ + K + Sbjct: 236 DWAEQIKATKVGGATVTRETERGVEFIGICSSREVSDDKTAQMVFQSEGSNDKAADDLSK 295 Query: 303 EYVKKLRSNAII 314 +YV +L++ A I Sbjct: 296 KYVDELKAKARI 307 >gi|91203827|emb|CAJ71480.1| similar to peptidyl-prolyl cis-trans isomerase (survival protein SurA precursor) [Candidatus Kuenenia stuttgartiensis] Length = 333 Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 96/288 (33%), Gaps = 8/288 (2%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL---EKIAVQELIVETLKKQEIE 91 S ++ TINGE IT ++ + + K Q + EK + L+ + L Q I+ Sbjct: 47 QIGDSKKVVATINGESITKAEVERVLERFKNQLPPDRIASVEKQIIDGLVAQKLFLQFIK 106 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 K+ I + + + + L+ L++ + L ++ Sbjct: 107 KNKIAIGDDALKTELDKVREDIKLNPGLQGKSLEEVLESHGSNIEDLKRDITISLSLEKY 166 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 F + +++ K + ++ + ++ +++I+ + Sbjct: 167 FADTVSDAKVKDYFEKNRQIYDGTEVQASHILVDTRNLQGEEDLAKAKQKIEKVKAEIAE 226 Query: 212 LPKDCNK-LEKFASKIHDVSIGKAQYL-LESDLHPQF-QNLLKKSQNNTTNPYVTQKGVE 268 KD K E+++ G Y + + F + ++ TQ G Sbjct: 227 GKKDFAKLAEEYSDCPSSKKGGDLGYFVRKGQMVEPFAEAAFALKVGEVSDVVTTQFGYH 286 Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D + G L + ++++ + +L+ A I Sbjct: 287 IIKVTDIKKGG--EIDFNELKPEIKLDILKQNADSLLDRLKQQAKIEI 332 >gi|316985214|gb|EFV64166.1| PPIC-type PPIASE domain protein [Neisseria meningitidis H44/76] Length = 359 Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 82 SDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 141 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ ++ LS A I V + Sbjct: 142 RNIQASEAEIDAVVAKNPALKNLSPAQRR---------------DFADNIIAEKVRQQAV 186 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 187 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 246 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 247 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 306 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 307 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 358 >gi|161870782|ref|YP_001599955.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis 053442] gi|161596335|gb|ABX73995.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis 053442] Length = 353 Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 76 SDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 135 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ ++ LS A I V + Sbjct: 136 RNIQASEAEIDAVVAKNPALKNLSPAQRR---------------DFADNIIAEKVRQQAV 180 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 181 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 240 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 241 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 300 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 301 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 352 >gi|319407065|emb|CBI80702.1| Peptidyl-prolyl cis-trans isomerase [Bartonella sp. 1-1C] Length = 319 Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 115/292 (39%), Gaps = 6/292 (2%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEI 90 + + T+NG IT+ DI +RIA LKLQ+ G L A +LI E LK EI Sbjct: 27 FFTSQAFAQTSVVVTVNGNAITNYDIQRRIAFLKLQQKQGNLATQAKNDLIDEVLKNNEI 86 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 ++ I + V F A ++ + + L + + HFK Y+ Q W +V Sbjct: 87 KRRNIEVSKDEVENAFENFAAQNNMTVDQLNQMLTQTDVTVEHFKAYIWGQMGWGRLVNA 146 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + G + + + + T+ I + ++ K Sbjct: 147 RYQAEGGVITEQEASQRILKNGGVKPSTNEYTLQQIIFVIPEHRWSAILEKRKKEANKFR 206 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEY 269 + CN + A I D++I LE L ++ + + TN TQ G+E Sbjct: 207 ANFQGCNSAKNQAKGILDITIRHLGKFLEPQLPQNWEKAILATPAGKMTNFQETQNGIEA 266 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTK-----IEKHEAEYVKKLRSNAIIHY 316 +A+C + + + + S Q+ K +E +Y+K+LR A I Sbjct: 267 VAVCQIKRVSDDRVARLIFSIQDHQKKDIPQLLEALSEKYLKELRQTARIQN 318 >gi|33152289|ref|NP_873642.1| peptidyl-prolyl cis-trans isomerase [Haemophilus ducreyi 35000HP] gi|33148512|gb|AAP96031.1| survival protein SurA-like protein [Haemophilus ducreyi 35000HP] Length = 317 Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 107/316 (33%), Gaps = 15/316 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +KL + +L+ +S + A + T+N + + + +LL QK + Sbjct: 1 MKLNSAKSLLVALVTAVSLSQSAMAWEEHVVATVNNIPVMESQVQ---SLLGQQKNSKTD 57 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 K+A++ +I + L ++ I +GI D V+ A + G++ +D QGI + Sbjct: 58 RKMAIEHIIDDILVQKTIADAGIQVDYKLVDKAIEDIAASNGITYGQLLDAIDNQGISLD 117 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI---------PANKQKMKNITVREYLIRTV 183 ++ +A Q V E+ + ++ + Sbjct: 118 QYRGQIAQQMAMEQVRHMSISQSIQLDPNEVQTLAKKMLEEDKAKGKLKKSMGTQYRISH 177 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 + L + K ++ A + + + + G Y Sbjct: 178 ILIKTTPVLNDAKAKAKLMRIAADIKAGKTTFEQAAKANSIDYISAADGGDLGYNFLDIY 237 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKH 300 P F + K QN + P+ +Q G + + + + ++ Sbjct: 238 DPTFAKIANKAKQNQISAPFKSQFGWHILKVTATQKADRTEDSYNQFAYELLANQQGQEI 297 Query: 301 EAEYVKKLRSNAIIHY 316 ++VK LRS+A I Y Sbjct: 298 AKDWVKILRSSADIQY 313 >gi|294139570|ref|YP_003555548.1| survival protein surA [Shewanella violacea DSS12] gi|293326039|dbj|BAJ00770.1| survival protein surA [Shewanella violacea DSS12] Length = 434 Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 105/314 (33%), Gaps = 15/314 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---- 68 +K + + + R+ +N ++ + +I+ + +K Sbjct: 1 MKPCKHLIIAFLTLASSHMVQAENTPLDRVSVQVNEGIVLESEITNMVTTVKTNASAAGQ 60 Query: 69 ----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + L ++ LIV L+ Q ++ G+ ++ A++ L+ + + Sbjct: 61 SLPSDQALRTQVIERLIVTRLQMQMADRIGLHIGDLQLDQTIGNIAKDQKLTVDQMKHKI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 +G+ +H+++ L + ++ + + EI ++ +++ + Sbjct: 121 GGEGMSWSHYREQLREEMTLGEIQRIQVQRRIQVSPQEINNLVNMIEEQGLKQTEFQIGH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESD 241 I ++K A + R+ + ++ + G Y+ ++ Sbjct: 181 ILIEIPNDPTSEQLEKASNRANKVLERVKDGGDFRRTAIAASAGPKALEGGIWDYMNINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTKI 297 + F + L + + P + G I + D R L + + ++ + +P Sbjct: 241 MPTLFAEVLSDAKKGDIIGPIRSGAGFHIIKVIDARGLQTKEVKEVRSRHILIKPSPILS 300 Query: 298 EKHEAEYVKKLRSN 311 E+ + K Sbjct: 301 EERAKAMLDKFVKQ 314 Score = 79.3 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 32/294 (10%), Positives = 81/294 (27%), Gaps = 27/294 (9%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI---TFDSNTVNYF 105 E +T G+I + ++Q E+ + +I E KQ + G ++ + Sbjct: 136 EEMTLGEIQRIQVQRRIQVSPQEINNLV--NMIEEQGLKQTEFQIGHILIEIPNDPTSEQ 193 Query: 106 FVQHARNTGLSAEDFSS--------FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + + E G + + + + + Sbjct: 194 LEKASNRANKVLERVKDGGDFRRTAIAASAGPKALEGGIWDYMNINEMPTLFAEVLSDAK 253 Query: 158 NLEME-----------IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 ++ I + + + + P L + K + Sbjct: 254 KGDIIGPIRSGAGFHIIKVIDARGLQTKEVKEVRSRHILIKPSPILSEERAKAMLDKFVK 313 Query: 207 ESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQ 264 + R K++ G+ + + P F Q L + N+ + P+ + Sbjct: 314 QLRAGDADFAALAHKYSEDPGSAAKGGELGWADPTVYVPAFSQTLKGLNVNDISEPFRST 373 Query: 265 KGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + + ++R K + ++ ++R+ A I + Sbjct: 374 HGWHIVQLEERRTTDATAKFNTNKAHQLIYRRKFNEELQTWLDEMRAEAYIEVF 427 >gi|116620640|ref|YP_822796.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Solibacter usitatus Ellin6076] gi|116223802|gb|ABJ82511.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Solibacter usitatus Ellin6076] Length = 342 Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 110/333 (33%), Gaps = 32/333 (9%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + F + + ++ + + + ++ IT+ D+ K Q+ G Sbjct: 1 MKRIFVVFAAGVAALT--LASCKHSPPANVAAEVDNHAITNSDLEKTYQSQYAQQSEGAS 58 Query: 73 EKIAVQE-------LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 E + + +I + + ++ EK G+ V+ + E+F L Sbjct: 59 EDQILTQKLDLLSSMITQEIMLRKAEKLGLAAVDADVDAEIS--KMRAPYTKEEFEKQLS 116 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV-- 183 Q + + K + + +V + K + ++ K + Sbjct: 117 AQHMTLDDLKLKVRSKLTVDKLVNKEITSKITITDADVKNFYNNNKAAFNLPEPAIHMAQ 176 Query: 184 ----------LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIG 232 + ++ ++K QN + +I+D R + ++ + G Sbjct: 177 ILVTPFPDPNVRNLKNSKAQNDKEARAKIEDILGRLKRGDDFGMLAQNYSEDANSAPNGG 236 Query: 233 KAQYLLESDL----HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG----GEIAL 284 ++ +SDL + ++ N + T +G + + K G + + Sbjct: 237 DMGFVRQSDLEKVNPELRKMVISLPPNGVSPIIPTPEGYRILKVISKEPAGQRELNDPRV 296 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + +K + A Y + R++A I Y Sbjct: 297 QQNIRDTLLNSKDQLLRAAYYETARNDAKIQNY 329 >gi|317485407|ref|ZP_07944286.1| SurA domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316923366|gb|EFV44573.1| SurA domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 308 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 104/312 (33%), Gaps = 23/312 (7%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI----------- 68 V F + +++ A + + +NGE+IT D+ A +++ Sbjct: 3 IVSTAFLLFFLITSPVRAAINGVAAVVNGEMITAFDLQAETAPEAMRRGLNPKDPNQAAA 62 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 EL K ++ +I + QE ++ I+ + V+ Q ++ E+F L Q Sbjct: 63 IEELTKATLERMINNIILTQEAQRLKISVGDSEVDNEIQQIMSRNKMTPEEFQRQLQIQR 122 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + F++ + + ++ N K + EI + K + +R + P Sbjct: 123 TTEKDFRERIRSSILRNRLLANMVGRKVIVTKEEIADYYNQHKQTFMNNQKVRFAVIVYP 182 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 + + R + + G + + L P +Q+ Sbjct: 183 PTENAEAQAARIRSGK--------LSFEQAARQVSVGPRAQEGGDVGVVDWNSLDPTWQD 234 Query: 249 L-LKKSQNNTTNPYVTQKGVE-YIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + + + G++ + + D + K+++ EY Sbjct: 235 RLSQLKPGDVSGLFEVNNGLKGQLKLLSMESGDGQTLEEATPQIERILREPKLQERFREY 294 Query: 305 VKKLRSNAIIHY 316 ++LR A++ Sbjct: 295 SEQLRKRAVVEI 306 >gi|302343060|ref|YP_003807589.1| SurA domain protein [Desulfarculus baarsii DSM 2075] gi|301639673|gb|ADK84995.1| SurA domain protein [Desulfarculus baarsii DSM 2075] Length = 327 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 115/324 (35%), Gaps = 21/324 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA----------- 61 ++ + + P+ + + + +R+ + E IT ++ + I Sbjct: 3 LRSVIAGLAFVTMAFAPL-AVLAEELVNRVVAVVGDEPITAAELDRSIQGLLQRLQMMQQ 61 Query: 62 ---LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 E+ +A+ LI E L +E+E+ I+ V+ F + ++ + Sbjct: 62 QQGQNMAMPPAAEVRYMALNSLIDEKLFNKEVERLKISVSEEEVSMFLERLKAANNMTQQ 121 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 +F + L++ G+ +++ + + ++ + K + E+ + + Sbjct: 122 EFIARLNETGMTPEEYREKVRNDQLKRKLINYEVKNKVVISDKEVDDYLAEHPELVQGGG 181 Query: 179 LIRTV----LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 T+ L + + ++ + + E + + S GK Sbjct: 182 PQLTIQALFLKLPENAGDDVKAQLRAKAEALREEAVDGADFDEMCRANSQGPGAASGGKI 241 Query: 235 QYLLESD-LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD-LGGEIALKAYLSAQN 292 L +SD L + L + + + GV ++ + D G ++ + A+ Sbjct: 242 GPLSKSDLLPEMGKALETMKEGDMSPVLDIPSGVVFMRLISLTDGKEGSAEVRDQVRARL 301 Query: 293 TPTKIEKHEAEYVKKLRSNAIIHY 316 ++E+ E++K+LR+ I Sbjct: 302 ENNQLEERFGEWMKELRAKTYIQI 325 >gi|77361548|ref|YP_341123.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Pseudoalteromonas haloplanktis TAC125] gi|122070669|sp|Q3IFD3|SURA_PSEHT RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|76876459|emb|CAI87681.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Pseudoalteromonas haloplanktis TAC125] Length = 431 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 111/318 (34%), Gaps = 19/318 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK----- 67 + L ++ + ++ + ++ +N VI ++ + +K Q Sbjct: 1 MNLKKLLTSAVLSISLCQSAFAAPVEIDKVIGIVNQGVILKSEVDTIVNRVKKQAEEQSQ 60 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + L AV+ L+ +TL Q E+ G+ + ++ A+ G S D + Sbjct: 61 ELPKDETLRVQAVERLVNQTLMMQMAERMGLEISDSQLDQTLASMAKEQGGSIADLRRTI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRT 182 + G +++ + + V++ + + E E+ + + EY I Sbjct: 121 EGSGESFQAYREEIRKEITTQQVMRANVDRRVYVSEQEVDNLLKIMESQGQNAEEYDIGH 180 Query: 183 VLFSIPDNKLQNQGFVQK-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 +L IP + ++ K R E + +S + G+ ++ ++ Sbjct: 181 ILIDIPSDASADEIASAKTRADKVIELLNDEQEFKRIAISSSSGSQALEGGQLGWMGINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD---LGGEIALKAYLSAQ----NT 293 + F + + K Q P + G I + D R + ++ + + Sbjct: 241 MPSLFAEAVKGKKQGAIIGPLRSGAGFHIIKVQDVRGRQVVETTETRSRHILIKPSIILS 300 Query: 294 PTKIEKHEAEYVKKLRSN 311 K A +VK LR++ Sbjct: 301 EEKARSMLAGFVKDLRAD 318 Score = 76.3 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 33/275 (12%), Positives = 79/275 (28%), Gaps = 9/275 (3%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 +++ ++ + +++ Q N E E LI E + ++ V Sbjct: 154 VSEQEVDNLLKIMESQGQNAE-EYDIGHILIDIPSDASADEIASAKTRADKVIELLNDEQ 212 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM-----EIPA 165 ++ S +G V G L I Sbjct: 213 EFKRIAISSSSGSQALEGGQLGWMGINEMPSLFAEAVKGKKQGAIIGPLRSGAGFHIIKV 272 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + + + P L + ++ R ++++ Sbjct: 273 QDVRGRQVVETTETRSRHILIKPSIILSEEKARSMLAGFVKDLRADKADFAKLAKEYSED 332 Query: 226 I-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL-GGEI 282 + G+ + + P F++ L QN + P+ +Q G + + D R E Sbjct: 333 PGSALKGGEYDWADPTSYVPAFRDTLLSLKQNEISEPFRSQFGWHIVQLLDTRVADKTEQ 392 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 A + K ++ + +++R A + + Sbjct: 393 AKRNRAHGMLFNRKFKEESFNWQQEMREQAHVEIF 427 >gi|303326078|ref|ZP_07356521.1| peptidyl-prolyl cis-trans isomerase domain protein [Desulfovibrio sp. 3_1_syn3] gi|302863994|gb|EFL86925.1| peptidyl-prolyl cis-trans isomerase domain protein [Desulfovibrio sp. 3_1_syn3] Length = 640 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 40/403 (9%), Positives = 105/403 (26%), Gaps = 96/403 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + ++ F + ++++F + S+ ++ + +NG+ I + Sbjct: 1 MLDYIRSNAQSFGVKVAFGVIILVFVFWGVGSFNDRNSAN-VVAIVNGDPILVQQFEQAY 59 Query: 61 AL------------LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + Q L + +++LI +TL QE ++G++ + + Sbjct: 60 RNAEESILRNNPGVTREQLKEQHLGRQVLRDLIQQTLLAQEAARAGVSVTPLELRQAVGR 119 Query: 109 HAR----NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK--------------- 149 E ++ L Q I +++ ++ Q + + Sbjct: 120 IKSFQDAQGRFDPEAYTRVLAAQRISPAQYEKDMSDQLLREKIFTLVTAPVWVDPDEAQN 179 Query: 150 ------------------NDFMLKYGNLEMEIPANKQKMKNIT----VREYLIRTVLFSI 187 +F + + ++ A K + +V Sbjct: 180 RYNFLREKRVVDYLFIPAKNFSGEVKVTDQDVTAYYDAHKKDFAIPPKVDVAYVSVTPGG 239 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL---------------------------- 219 ++ +A +SR P Sbjct: 240 LVKPESISEADAQKWYEANKSRFEEPAQVKAAHILVPLAENAPADAEKKAREEVAKIQAE 299 Query: 220 ----EKFASKIHDVS-------IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 + FA+ + G+ ++ F++ + P + G+ Sbjct: 300 LKSGKDFAAVADAHNGSNAAGPGGELGWITPGKTVKPFEDAAFALKAGQVSEPVRSPFGL 359 Query: 268 EYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 I + DK+ L + + + + L Sbjct: 360 HIIKVEDKKPGGLKTFKDAAREVRQAMAQEQGADKLHDVLDSL 402 >gi|94497694|ref|ZP_01304262.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingomonas sp. SKA58] gi|94422911|gb|EAT07944.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingomonas sp. SKA58] Length = 462 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 87/256 (33%), Gaps = 10/256 (3%) Query: 44 TTINGEVITDGDISKRIALLKLQK-------INGELEKIAVQELIVETLKKQEIEKSGIT 96 +NG +IT D+ +R+AL+ L ++ LI ETL+ QE + I Sbjct: 74 AIVNGRIITGTDVDQRLALIITANGGKVSDEEKERLRVQVLRNLIDETLQIQEAAANDIK 133 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 + + + A N S +F ++L QG K+ + + W +++ + Sbjct: 134 IAPEEIEQSYQRVAANFRKSPTEFDAYLRSQGSSAASIKRQIEGELAWSRLLRRNIQPFV 193 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 E E+ + + + +NQ + ++ + + Sbjct: 194 NVSEDEVK--SVIDRLNAAKGSDEYRIGEIYLSATPENQAQIVANARNIIQQIQQGGSFQ 251 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275 +F+ G ++ + L + + P T GV I + DK Sbjct: 252 AYARQFSEASTAAVGGDLGWIRPAQLPSELAQAAAEMQVGQIAGPIETVGGVSIIYVMDK 311 Query: 276 RDLGGEIALKAYLSAQ 291 R + A LS + Sbjct: 312 RKVLTADPRDALLSLK 327 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 3/87 (3%) Query: 233 KAQYLLESDLHPQFQNLL-KKSQNNTTNPYVT-QKGVEYIAICDKR-DLGGEIALKAYLS 289 + DL PQ Q +L TT P+ + + GV + +C + + Sbjct: 375 DNDNVKVRDLPPQLQEILLNLQVGETTPPFGSIEDGVRVLIVCGRDDPASANAPNADQIM 434 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 AQ ++ K Y++ LR +A+I Y Sbjct: 435 AQLEEERVNKRARIYLRDLRRDAVIDY 461 >gi|86747655|ref|YP_484151.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris HaA2] gi|86570683|gb|ABD05240.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris HaA2] Length = 306 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 83/305 (27%), Gaps = 47/305 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---SKRIALLKLQKINGE 71 +++ + + ++ + +NG I D+ + + Q Sbjct: 16 IISAAATGCLAFALLASPMARAQDANPVLAKVNGAEIRQSDVTLAEEELGPSLAQMDPAT 75 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 ++ + LI + + E I + Sbjct: 76 KKENVLSFLIDMKIVAKAAEDKKIADRAEFKKRL-------------------------- 109 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 ++ + + D++ + + M+ + +E R +L D Sbjct: 110 ----EFARNRLLMDDLLGVEGKAATTDEAMKKVYEDAAKQISGEQEVHARHILVETEDEA 165 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLL 250 ++K +K + G + + + P+F Sbjct: 166 KAIAEELKK-----------GADFAELAKKKSKDPGASDGGDLGFFTKDQMVPEFSAVAF 214 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 ++P +Q G I + +KR+ + Q K +++YV +LR Sbjct: 215 ALEPGKISDPVKSQFGWHIIKVEEKRNRKP--PTFDQVKPQIEQYVTRKAQSDYVTQLRQ 272 Query: 311 NAIIH 315 A + Sbjct: 273 AAKVE 277 >gi|85058404|ref|YP_454106.1| peptidyl-prolyl cis-trans isomerase SurA [Sodalis glossinidius str. 'morsitans'] gi|121956483|sp|Q2NVX4|SURA_SODGM RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|84778924|dbj|BAE73701.1| survival protein SurA precursor [Sodalis glossinidius str. 'morsitans'] Length = 431 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 36/319 (11%), Positives = 99/319 (31%), Gaps = 20/319 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +K T+ + + C ++ ++ + ++ ++ +K Sbjct: 1 MKNWRTFILGLALCANGALAAPQVVDKVAAVVD--NGIVLESEVDNMLSTVKHGAQEANQ 58 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + + LI++ + Q +++ IT ++ A +S + S L Sbjct: 59 QLPDDTTLRRQILDRLIMDNIILQLAQRTNITISDEQLDQAIGNIAAQNHMSLDQLRSRL 118 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 GI N ++ + + + +V + + L E+ + Q++ T Sbjct: 119 PYDGIDYNTYRTQIRKEMLIAEVRNGEVRRRVTILPQEVESLAQQIAAQTGNGAEFNLSH 178 Query: 185 FSIPDNKLQNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 IP + Q + K + E +++ + G+ + + Sbjct: 179 ILIPLPENPTQDQLDKAEELATSIVEQSKSGADFGKLAITYSADAQALKGGQMGWGKLEE 238 Query: 242 LHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTK 296 L F + + P + G + + D R + ++ + + Sbjct: 239 LPSLFAARLQGAQKGSIVGPIRSGVGFHILKVNDIRGGDQKVAVTEVHARHIMLRTSVVM 298 Query: 297 IEKHEAEYVKKLRSNAIIH 315 ++ ++ + A I Sbjct: 299 TDQQARAKLEDI--AAQIK 315 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 17/140 (12%), Positives = 42/140 (30%), Gaps = 3/140 (2%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238 + + +Q K A + + ++ + G + Sbjct: 286 HARHIMLRTSVVMTDQQARAKLEDIAAQIKSGRISFAAAAKQLSEDPGSANQGGDLGWSS 345 Query: 239 ESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTK 296 P F+N + + + P + G I + D R + + A K K Sbjct: 346 ADAFDPAFRNALMHLKKGEISTPVHSSFGWHLIQLIDTRQVDRTDAAQKDRAYRLLFNRK 405 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 + ++++ R++A + Sbjct: 406 FAEEAQTWMQEQRASAYVKI 425 >gi|325205366|gb|ADZ00819.1| surA/PPIASE domain protein [Neisseria meningitidis M04-240196] Length = 387 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 110 SDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 169 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ ++ LS A I V + Sbjct: 170 RNIQASEAEIDAVVAKNPALKNLSPAQRR---------------DFADNIIAEKVRQQAV 214 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 215 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 274 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 275 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 334 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 335 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 386 >gi|325203397|gb|ADY98850.1| PPIC-type PPIASE domain protein [Neisseria meningitidis M01-240355] Length = 366 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 89 SDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 148 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ ++ LS A I V + Sbjct: 149 RNIQASEAEIDAVVAKNPALKNLSPAQRR---------------DFADNIIAEKVRQQAV 193 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 194 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 253 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 254 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 313 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 314 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 365 >gi|325199485|gb|ADY94940.1| PPIC-type PPIASE domain protein [Neisseria meningitidis H44/76] Length = 360 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 83 SDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 142 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ ++ LS A I V + Sbjct: 143 RNIQASEAEIDAVVAKNPALKNLSPAQRR---------------DFADNIIAEKVRQQAV 187 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 188 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 247 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 248 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 307 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 308 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 359 >gi|325197566|gb|ADY93022.1| PPIC-type PPIASE domain protein [Neisseria meningitidis G2136] Length = 360 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 83 SDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 142 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ ++ LS A I V + Sbjct: 143 RNIQASEAEIDAVVAKNPALKNLSPAQRR---------------DFADNIIAEKVRQQAV 187 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 188 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 247 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 248 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 307 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 308 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 359 >gi|325145275|gb|EGC67554.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis M01-240013] Length = 369 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 92 SDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 151 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ ++ LS A I V + Sbjct: 152 RNIQASEAEIDAVVAKNPALKNLSPAQRR---------------DFADNIIAEKVRQQAV 196 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 197 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 256 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 257 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 316 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 317 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 368 >gi|325143121|gb|EGC65468.1| PPIC-type PPIASE domain protein [Neisseria meningitidis 961-5945] Length = 363 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 86 SDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 145 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ ++ LS A I V + Sbjct: 146 RNIQASEAEIDAVVAKNPALKNLSPAQRR---------------DFADNIIAEKVRQQAV 190 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 191 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 250 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 251 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 310 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 311 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 362 >gi|325141118|gb|EGC63621.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis CU385] Length = 357 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 80 SDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 139 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ ++ LS A I V + Sbjct: 140 RNIQASEAEIDAVVAKNPALKNLSPAQRR---------------DFADNIIAEKVRQQAV 184 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 185 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 244 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 245 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 304 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 305 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 356 >gi|325135085|gb|EGC57713.1| PPIC-type PPIASE domain protein [Neisseria meningitidis M13399] Length = 363 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 86 SDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 145 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ ++ LS A I V + Sbjct: 146 RNIQASEAEIDAVVAKNPALKNLSPAQRR---------------DFADNIIAEKVRQQAV 190 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 191 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 250 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 251 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 310 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 311 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 362 >gi|325128991|gb|EGC51842.1| surA/PPIASE domain protein [Neisseria meningitidis N1568] Length = 390 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 113 SDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 172 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ ++ LS A I V + Sbjct: 173 RNIQASEAEIDAVVAKNPALKNLSPAQRR---------------DFADNIIAEKVRQQAV 217 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 218 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 277 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 278 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 337 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 338 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 389 >gi|261391812|emb|CAX49267.1| putative peptidylprolyl isomerase (peptidyl-prolyl cis-trans isomerase; PPIase; rotamase; cyclophilin; FKBP65) [Neisseria meningitidis 8013] Length = 354 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 77 SDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 136 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ ++ LS A I V + Sbjct: 137 RNIQASEAEIDAVVAKNPALKNLSPAQRR---------------DFADNIIAEKVRQQAV 181 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 182 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 241 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 242 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 301 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 302 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 353 >gi|254674145|emb|CBA09929.1| PPIC-type PPIASE domain protein [Neisseria meningitidis alpha275] Length = 378 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 101 SDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 160 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ ++ LS A I V + Sbjct: 161 RNIQASEAEIDAVVAKNPALKNLSPAQRR---------------DFADNIIAEKVRQQAV 205 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 206 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 265 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 266 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 325 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 326 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 377 >gi|15676205|ref|NP_273337.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis MC58] gi|7225507|gb|AAF40735.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis MC58] Length = 348 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 71 SDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 130 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ ++ LS A I V + Sbjct: 131 RNIQASEAEIDAVVAKNPALKNLSPAQRR---------------DFADNIIAEKVRQQAV 175 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 176 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 235 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 236 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 295 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 296 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 347 >gi|255036261|ref|YP_003086882.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dyadobacter fermentans DSM 18053] gi|254949017|gb|ACT93717.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dyadobacter fermentans DSM 18053] Length = 457 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 26/280 (9%), Positives = 79/280 (28%), Gaps = 8/280 (2%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK 67 ++ +I +++ +V + +I ++ I ++ K + Sbjct: 2 KVNKWIGAHLAAIFMLLCSVVSFGQGQQGVSLDKIIARVDNHYILSSELEDMYNQYKAEG 61 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 + ++ LI+ + + E +T + V+ + ++ Sbjct: 62 RGAPEKCQLLESLIINKMLLAKAEIDSVTVEDKEVDGELNAKMNYMVQRFGSEKNIVEAY 121 Query: 128 GIGDNHFKQYLAIQSIWPDVVKND---FMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 G + K L Q +V+ ++ + ++ + Sbjct: 122 GKSIENLKGELRQQVKEQKIVEKMQRTISGNVKITPADVRKFFNSIPKDSLPYIPSEVEV 181 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRL---RLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 I + +K + +E + + + ++ + G + Sbjct: 182 GHIVKKGTVTREQKEKLRQQLQELKQRAEKGEDFAMLAQIYSEDLGSAKVGGDLGFAKRG 241 Query: 241 DLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + P+F+ +N +Q G I + + R Sbjct: 242 QMVPEFEGAALGLKPGEMSNVIESQFGFHLIKLIETRGAE 281 >gi|148553334|ref|YP_001260916.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingomonas wittichii RW1] gi|148498524|gb|ABQ66778.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingomonas wittichii RW1] Length = 446 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 83/256 (32%), Gaps = 10/256 (3%) Query: 44 TTINGEVITDGDISKRIALLKLQK-------INGELEKIAVQELIVETLKKQEIEKSGIT 96 +NG +IT D+ +R+AL+ L ++ LI ETL+ QE + Sbjct: 58 AIVNGTIITQTDVEQRLALVIAANGGNIPDEERERLRLQVLRNLIDETLQIQEATAQKVE 117 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 V + + A N S ++F+ FL ++G K+ + ++ W V+ Sbjct: 118 VSREEVQQTYDRVAANFRKSPKEFAEFLHEKGSSQASIKRQIEGEAAWRRVLSRKVEPFV 177 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + E+ N + + V + + + R Sbjct: 178 AVSDEEV--NAIIARLKASKGANEYHVGEIFLSATPETMNEANANAERIIDQVRRGASFA 235 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 +F+ G ++ L Q + + + P G + + DK Sbjct: 236 AYARQFSEASTAAVGGDLGWVRAEQLPDQLSAVVNQLQPGQISQPIAIPGGYSILLLSDK 295 Query: 276 RDLGGEIALKAYLSAQ 291 R + G A L + Sbjct: 296 RQVLGADPRDAQLLLK 311 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 35/79 (44%), Gaps = 3/79 (3%) Query: 241 DLHPQFQNLL-KKSQNNTTNPYVT-QKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKI 297 DL PQ Q ++ +T P+ + + G+ + +C + + +Q ++ Sbjct: 367 DLPPQLQEVMLNLQIGQSTPPFGSMRDGIRALILCGRDDPAPSSGPSFEQIQSQIEQERV 426 Query: 298 EKHEAEYVKKLRSNAIIHY 316 + Y++ LR +A+I Y Sbjct: 427 NRRAQRYLRDLRRDAVIEY 445 >gi|325202891|gb|ADY98345.1| PPIC-type PPIASE domain protein [Neisseria meningitidis M01-240149] gi|325207310|gb|ADZ02762.1| surA/PPIASE domain protein [Neisseria meningitidis NZ-05/33] Length = 348 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 87/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 71 SDGIAAVADNEVITRRRLAEAVAEAKANLPKEAQISESELSRQVLMQLVNQSLIVQAGKR 130 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ +++ LS A I V + Sbjct: 131 RNIQASEAEIDAVVAKNSALKNLSPAQRR---------------DFADNIIAEKVRQQAV 175 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 176 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 235 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 236 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 295 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 296 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 347 >gi|325137107|gb|EGC59703.1| rotamase [Neisseria meningitidis M0579] Length = 360 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 87/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 83 SDGIAAVADNEVITRRRLAEAVAEAKANLPKEAQISESELSRQVLMQLVNQSLIVQAGKR 142 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ +++ LS A I V + Sbjct: 143 RNIQASEAEIDAVVAKNSALKNLSPAQRR---------------DFADNIIAEKVRQQAV 187 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 188 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 247 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 248 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 307 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 308 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 359 >gi|325131008|gb|EGC53735.1| PPIC-type PPIASE domain protein [Neisseria meningitidis OX99.30304] Length = 339 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 87/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 62 SDGIAAVADNEVITRRRLAEAVAEAKANLPKEAQISESELSRQVLMQLVNQSLIVQAGKR 121 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ +++ LS A I V + Sbjct: 122 RNIQASEAEIDAVVAKNSALKNLSPAQRR---------------DFADNIIAEKVRQQAV 166 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 167 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 226 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 227 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 286 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 287 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 338 >gi|254805678|ref|YP_003083899.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis alpha14] gi|254669220|emb|CBA08040.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis alpha14] Length = 351 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 87/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 74 SDGIAAVADNEVITRRRLAEAVAEAKANLPKEAQISESELSRQVLMQLVNQSLIVQAGKR 133 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ +++ LS A I V + Sbjct: 134 RNIQASEAEIDAVVAKNSALKNLSPAQRR---------------DFADNIIAEKVRQQAV 178 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 179 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 238 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 239 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 298 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 299 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 350 >gi|260466949|ref|ZP_05813131.1| SurA domain protein [Mesorhizobium opportunistum WSM2075] gi|259029246|gb|EEW30540.1| SurA domain protein [Mesorhizobium opportunistum WSM2075] Length = 307 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 124/300 (41%), Gaps = 9/300 (3%) Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78 + +L+ V + A +S I+ +N IT GDI+ R A LKLQ+ G+ A Q Sbjct: 10 FALLVAATSVSMTVMTPPAFASEIKYVVNNVPITTGDIAHRAAFLKLQRKKGD----AAQ 65 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 E+I +TL+ E + GI V + + A + + + ++K G+G +HFK+++ Sbjct: 66 EMIDQTLRLAEARRLGIRISDAQVEAAYQRFATSNKMQLSQLNGVMEKSGVGKDHFKEFI 125 Query: 139 AIQSIWPDVVKNDFMLKY--GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q W + + E + + Sbjct: 126 RAQMAWNQALGARYRSGEGGSVTEQDAVRRMLDKGGAKPSATEYMLQQVIFVVPASERSA 185 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 + KR ++A+ R R +FA + DV++ +L L P + + + Sbjct: 186 TLAKRKREADAMRARFNGCTTT-REFAKGLIDVTVRDLGRVLAPQLPPDWAEQIKATKVG 244 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK-IEKHEAEYVKKLRSNAII 314 T T++GVE+I IC R++ + + ++ + K ++ +YV++L++ A I Sbjct: 245 GATVTRETERGVEFIGICSSREVSDDKTAQMVFQSEGSSDKNADELSKKYVEELKAKAHI 304 >gi|91974780|ref|YP_567439.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisB5] gi|91681236|gb|ABE37538.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisB5] Length = 305 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 85/310 (27%), Gaps = 50/310 (16%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---SKRIALLKLQ 66 S FI T + P+ ++ + +NG I D+ + + Q Sbjct: 14 SGFISAAATGCLAFALLASPM---AHAEDANPVLAKVNGAEIRQSDVALAEEELGPSLAQ 70 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 ++ + LI + + E I + Sbjct: 71 MDPATKKENVLAFLIDMKIVAKAAEDKKIADRAEFKKRL--------------------- 109 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 ++ + + D++ + N M+ + +E R +L Sbjct: 110 ---------EFARNRLLMDDLLAVEGKNATTNDAMKKVYEDAAKQISGEQEVHARHILVE 160 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 D+ ++K +K + G + + + P+F Sbjct: 161 SEDDAKAVAEELKK-----------GADFAELAKKKSKDPGASDGGDLGFFTKEQMVPEF 209 Query: 247 -QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305 ++P +Q G I + +KR + Q K +A+YV Sbjct: 210 SAVAFAMEPGKISDPVKSQFGWHIIKVEEKRSRKP--PTFDQVKPQIEQYVTRKAQADYV 267 Query: 306 KKLRSNAIIH 315 +LR A + Sbjct: 268 AQLRQAAKVE 277 >gi|297180116|gb|ADI16339.1| parvulin-like peptidyl-prolyl isomerase [uncultured bacterium HF130_01F24] Length = 436 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 110/324 (33%), Gaps = 18/324 (5%) Query: 5 VFTSLSDFIKLLTTYFVLIIFC-IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63 + K L + +F V + + + R+ ++ VI ++ RI L Sbjct: 1 MIDRQKLKPKSLAVSIAITVFATFVGLSASAQRVLLDRVIALVDEGVILQSELDIRINDL 60 Query: 64 KL--------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 + E+ ++ LIVE ++ Q E+ I +D +T+N A N+ + Sbjct: 61 QQAAARDGRPLPPESEIRDDVLEALIVENIQLQMAEQVSIRYDDDTINRVLSNMAENSNM 120 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 S +++ + L+ G ++ + Q + ++ + + E EI V Sbjct: 121 SFDEYVTALE-NGGVYLQTREQVRQQMMIQELQRGMVNRRITITEQEIDNFLNSEMGREV 179 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK----LEKFASKIHDVSI 231 + + + Q++++ A + ++ + N E S + Sbjct: 180 MAPDFFIDHMVVVASGTDSDEEKQQKLRFAADLTAQVEEGSNFLQVRAEASESSNFQIQS 239 Query: 232 GKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 + L F +++ + + P G I + KR +I + + Sbjct: 240 TDFGWRKAEQLPILFSSIVVEMKEGEIAGPIEAGNGYHVIFLAGKRGGTEQIVKQTNIRH 299 Query: 291 QNT---PTKIEKHEAEYVKKLRSN 311 + E+ +++LR Sbjct: 300 IMLSPNEIRNEEQTITEIQELRQR 323 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 29/281 (10%), Positives = 89/281 (31%), Gaps = 12/281 (4%) Query: 46 INGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 +N + IT+ +I + +++ + ++V E+ Sbjct: 156 VNRRITITEQEIDNFLNSEMGREVMAP--DFFIDHMVVVASGTDSDEEKQQKLRFAADLT 213 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI-----QSIWPDVVKNDFMLKYGNL 159 V+ N + S + Q + + SI ++ + + Sbjct: 214 AQVEEGSNFLQVRAEASESSNFQIQSTDFGWRKAEQLPILFSSIVVEMKEGEIAGPIEAG 273 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSI-PDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + T + + + N+++N+ I++ + L Sbjct: 274 NGYHVIFLAGKRGGTEQIVKQTNIRHIMLSPNEIRNEEQTITEIQELRQRILSGEDFAVI 333 Query: 219 LEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276 + + V+ G ++ E + P+F+ +++ +N + P+ + G + +R Sbjct: 334 ARQHSDDATSVVAGGDLDWVNEGGMPPEFEAVIQVLEENTLSEPFESATGWHIAEVLGRR 393 Query: 277 DLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++ + K + ++ ++R A + + Sbjct: 394 ESDLSQQYTRSQAANSLRNRKFDLELQNWMIEIREKAFVEF 434 >gi|319411235|emb|CBY91642.1| peptidyl-prolyl cis-trans isomerase SurA [Neisseria meningitidis WUE 2594] Length = 360 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 87/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 83 SDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 142 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ +++ LS A I V + Sbjct: 143 RNIQASEAEIDAVVAKNSALKNLSPAQRR---------------DFADNIIAEKVRQQAV 187 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 188 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 247 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 248 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 307 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 308 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 359 >gi|239996025|ref|ZP_04716549.1| survival protein surA [Alteromonas macleodii ATCC 27126] Length = 427 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 98/314 (31%), Gaps = 15/314 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--- 71 + L++ ++ S M R+ ++ V+ + +I + +K Sbjct: 1 MKFIIRALMLGALLSFNSVAQEVMLDRVAVIVDQGVVLESEIDALVQDVKRNAEANNQQL 60 Query: 72 -----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 L A++ LI ++L+ Q E+ GI + A N + E+ + L Sbjct: 61 PSDRALRTQAIERLITKSLQLQMAERMGIRISDPQLEQTISNIAANQNATIEELRAQLAA 120 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 +GI + +++ + + I +V + + + EI M+ + R Sbjct: 121 EGIAYDDYREDIREEVIMGEVRRANVRRRVYITPQEIETLIDLMEQQGATQAEYRLGHIL 180 Query: 187 IPDNKLQNQGFVQ---KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 I +Q +R +S + G +L + + Sbjct: 181 IGFPPEPTDEDIQSARERADKVISLLESGSDFAKIAIASSSGNEALEGGDMGWLNINAMP 240 Query: 244 PQFQNLLKKSQNN-TTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEK 299 F ++ + P + G + + D R + E ++ + + E Sbjct: 241 TLFAEAIQNKDKDALVGPIRSGAGFHILKVLDTRGIEKVTVEEVNSRHILVKPSIILSED 300 Query: 300 HEAEYVKKLRSNAI 313 + + + Sbjct: 301 KAKAMLNRFKEEVK 314 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 16/139 (11%), Positives = 44/139 (31%), Gaps = 3/139 (2%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238 + P L + EE + ++ + + G+ + Sbjct: 285 NSRHILVKPSIILSEDKAKAMLNRFKEEVKNGEADFAELAKEHSEDPGSALRGGELGWSD 344 Query: 239 ESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTK 296 ++ P+F++ + + P T G I + ++R D + + K Sbjct: 345 PNNYVPEFKDALAQLEPGEFSEPVRTVHGWHLIQLIERRIDDATDKRKEDKAYQLIFNRK 404 Query: 297 IEKHEAEYVKKLRSNAIIH 315 + +++++R A + Sbjct: 405 FSEETENWLREMRDAAYVE 423 >gi|254671556|emb|CBA09191.1| PPIC-type PPIASE domain protein [Neisseria meningitidis alpha153] Length = 366 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 87/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 89 SDGIAAVADNEVITRRRLAEAVAEAKANLPKEAQISESELSRQVLMQLVNQSLIVQAGKR 148 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ +++ LS A I V + Sbjct: 149 RNIQASEAEIDAVVAKNSALKNLSPAQRR---------------DFADNIIAEKVRQQAV 193 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 194 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 253 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 254 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 313 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 314 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 365 >gi|121634150|ref|YP_974395.1| putative rotamase [Neisseria meningitidis FAM18] gi|120865856|emb|CAM09589.1| putative rotamase [Neisseria meningitidis FAM18] Length = 405 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 87/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ +A K EL + + +L+ ++L Q ++ Sbjct: 128 SDGIAAVADNEVITRRRLAEAVAEAKANLPKEAQISESELSRQVLMQLVNQSLIVQAGKR 187 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ +++ LS A I V + Sbjct: 188 RNIQASEAEIDAVVAKNSALKNLSPAQRR---------------DFADNIIAEKVRQQAV 232 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 233 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 292 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 293 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 352 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 353 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 404 >gi|59802035|ref|YP_208747.1| putative cis-trans isomerase [Neisseria gonorrhoeae FA 1090] gi|59718930|gb|AAW90335.1| putative cis-trans isomerase [Neisseria gonorrhoeae FA 1090] Length = 333 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 88/292 (30%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIEK 92 S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q ++ Sbjct: 56 SDGIAVVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGKR 115 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ Q+ LS LA I V + Sbjct: 116 RNIQASEAEIDAVVAQNPALKNLSPTQRR---------------ELADNIIAEKVRQQAV 160 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 161 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSKNAAVGAESTIRKIY 220 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 221 DQARNGTDFAGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 280 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD E ++ + K + ++ L S A + Sbjct: 281 GWHIIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVDI 332 >gi|197286178|ref|YP_002152050.1| peptidyl-prolyl cis-trans isomerase SurA [Proteus mirabilis HI4320] gi|194683665|emb|CAR44613.1| chaperone SurA protein (peptidyl-prolyl cis-trans isomerase) [Proteus mirabilis HI4320] Length = 436 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 111/294 (37%), Gaps = 18/294 (6%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GELEKIAVQELIVETLKKQ 88 +R+ +N V+ + D+++ + +++ N L + ++ L+++ + Q Sbjct: 27 QELNRVSAIVNNGVVLESDVNRMLQTVQMNAKNAGQEMPDEQVLRQQILERLVMDNIILQ 86 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 ++ I V A L+ E L GI N ++Q + + + +V Sbjct: 87 MAQQMQIDIPEAAVESTIQGIAAENNLTLEQLKKRLAADGIAYNDYRQDIRKEMMLAEVR 146 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 N+ + L E+ + +++++ + + IP ++ + ++K + Sbjct: 147 NNEVRRRITILPQEVDSLAKQIESQASQSIDLNLSHILIPLSENPSPAEIEKAQQVVNRI 206 Query: 209 RLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQ 264 + +L + +++ ++ G + +L F + L + P + Sbjct: 207 KNQLKNGADFGKLAATYSADPQALNGGNMGWASIDELPTIFAKQLANAQKGEIVGPLQSG 266 Query: 265 KGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 G+ I + D R + ++ +++P ++ ++K+ +A I Sbjct: 267 VGLHIIKVNDIRGASKTVSVTEVKARHILLKSSPIMNDEQAYAKLQKI--SADI 318 Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 51/138 (36%), Gaps = 3/138 (2%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 + + ++ K K + + R + ++++ + G+ + + Sbjct: 292 RHILLKSSPIMNDEQAYAKLQKISADIRSGKISFADAAKEYSEDPGSALRGGELGWSMPD 351 Query: 241 DLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE 298 P F++ ++ ++N + P + G I + D R + + A K K Sbjct: 352 IYDPAFRDALMRLNKNELSQPVRSNFGWHLIELEDTRSVDKTDAANKEQAYRLLFNRKFN 411 Query: 299 KHEAEYVKKLRSNAIIHY 316 + ++++LR+ A + Sbjct: 412 EEVQNWMQELRAGAYVKI 429 >gi|94309382|ref|YP_582592.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cupriavidus metallidurans CH34] gi|121956449|sp|Q1LRA3|SURA_RALME RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|93353234|gb|ABF07323.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Cupriavidus metallidurans CH34] Length = 493 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 87/305 (28%), Gaps = 24/305 (7%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEKIAVQELIV 82 S + + +N VIT ++ R ++ Q +L ++ L++ Sbjct: 73 SSQPRSQLVDEVVAVVNNSVITRRELLDRADEIESQLRAAKREVPPRPDLLGEVLERLVM 132 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E ++ Q +++GI V+ A+ +SA + S ++ G+ ++ L Q Sbjct: 133 ERVQTQAAQEAGIKVTDQEVDRAIESVAQQNKMSATELRSRVEASGMSWTKYRDELRKQV 192 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQG 196 + + + K + EI + + ++ D + Sbjct: 193 QVIRLREREVDSKVQVYDGEIDNYLAARNGGQAAASGPTEFNVAQILVRVPEDASDAQKA 252 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 ++ + + + + + G + L F N + Q Sbjct: 253 QLKTKAEGLLKQVQGGADFAELAKANSEAPEASQGGSLGFREIGRLPAVFANAVVDLQPG 312 Query: 257 --TTNPYVTQKGVEYIAICDKR-----DLGGEIALKAYLSAQNTP---TKIEKHEAEYVK 306 + G + + KR + + + E + Sbjct: 313 AVVPEVLESANGFHVVKLVSKRTAAAQPAASDRIAQTQVRHILIRTGPNMPEAEAKRQMA 372 Query: 307 KLRSN 311 +R Sbjct: 373 TIRDR 377 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 55/140 (39%), Gaps = 2/140 (1%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 + I + ++++ + + +++ G+ ++ Sbjct: 348 QTQVRHILIRTGPNMPEAEAKRQMATIRDRITHGVDFADAARRYSQDGSASQGGELGWVS 407 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTK 296 +L P+F+ + + ++P VTQ GV I + ++R+ + + A+ K Sbjct: 408 PGELVPEFEQAMNRLRPGEISDPVVTQFGVHLIQVENRRETEVSPEKQRDFARAEVREQK 467 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 + ++V++LRS A + Y Sbjct: 468 LRAAYDDWVRQLRSAAYVEY 487 >gi|16125933|ref|NP_420497.1| peptidyl-prolyl cis-trans isomerase family protein [Caulobacter crescentus CB15] gi|13423099|gb|AAK23665.1| peptidyl-prolyl cis-trans isomerase family protein [Caulobacter crescentus CB15] Length = 501 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 103/285 (36%), Gaps = 16/285 (5%) Query: 39 SSRIRTTINGEVITDGDISKRIALL-------KLQKINGELEKIAVQELIVETLKKQEIE 91 S + +N ++I+ D+ +R+ LL Q+ ++E+ A++ LI E L+ QE++ Sbjct: 106 SESVAAVVNDDIISSYDLMQRMRLLMATSGMQPTQENLPQIEQEALRSLIDERLQMQELK 165 Query: 92 KSGITFD------SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + V A++ L E L QGIG + ++ L +S W Sbjct: 166 RVEKQQKITIISTDKEVEEQIGDIAQSNRLQPEQLKQQLVAQGIGLDTWRAQLRAESSWQ 225 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 ++ + + E +I A ++++ + + + +F Sbjct: 226 SWIQGRYGSRLRIGEDQIKAYQRRLADAAAKPQYQISEVFLDAARVGG-MEVAVNGATQL 284 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQ 264 + +F+ + G+ ++ + ++ + L + + P + Sbjct: 285 INQMQQGAPFAAVARQFSGSATAANGGEVGWVSQGEMPTEVDAALEQLRPGQLSRPIQVK 344 Query: 265 KGVEYIAICDKRDLGGEIALK-AYLSAQNTPTKIEKHEAEYVKKL 308 GV I + DKR + ++A E A K+L Sbjct: 345 DGVYIIYLRDKRAGSKTAIVDLKQVAAPLAADATEAQIAAATKQL 389 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 2/125 (1%) Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + + K + + ++ LE A+K+ + G +DL P FQ Sbjct: 376 DATEAQIAAATKQLVDLKPKITSC-QSLEATAAKVDGLVAGDLGEAEITDLAPAFQEAAN 434 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 K ++P T G+ IA+C KR G + + ++ Y++ LR+ Sbjct: 435 KLEVGQISDPIRTDAGLHLIAVCGKRQGGANAPTHDQIENRLRGQQLALIAKRYLRDLRN 494 Query: 311 NAIIH 315 A I Sbjct: 495 QATIE 499 >gi|253701712|ref|YP_003022901.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21] gi|251776562|gb|ACT19143.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21] Length = 323 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 94/298 (31%), Gaps = 17/298 (5%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL---------EKIAVQELIVET 84 +S + +NG IT G++ + + L Q + + A+ +LI Sbjct: 25 PQQKLSQDVPALVNGAPITRGEVDRAVKALLSQNRMAQPIAPEVMKKATEAALDQLISAE 84 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 + Q + G+ V Q E + LD + + + + + Sbjct: 85 VLYQAASEMGVADLDRQVRDRVAQSRSRYRTGDE-YEKALDSVEMSEKEVELAVRKDIVI 143 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNIT----VREYLIRTVLFSIPDNKLQNQGFVQK 200 ++++ F+ K E EI ++ + + R + + ++ + ++ Sbjct: 144 NNLIRTQFLPKATVSEAEIEEFYRENREKSFRLGERVRVSQILVPVPEQATPAARKQARE 203 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 + + + ++ + + G L + P F+ + Sbjct: 204 KALALLQRVRKGEDFAAVASLESAPPTNKNGGDMGGLNRGEAVPSFEKAAFGLKVGEVSE 263 Query: 260 PYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T G + + K + + +K+ K AEY +LR++ I Sbjct: 264 VVETPVGFHIVKLSQKLPPATATLDEARGQIVRYLQQSKVRKSVAEYAAQLRASGHIE 321 >gi|254494588|ref|ZP_05107759.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae 1291] gi|268599899|ref|ZP_06134066.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae MS11] gi|268604500|ref|ZP_06138667.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID1] gi|268685120|ref|ZP_06151982.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae SK-92-679] gi|268687382|ref|ZP_06154244.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae SK-93-1035] gi|226513628|gb|EEH62973.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae 1291] gi|268584030|gb|EEZ48706.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae MS11] gi|268588631|gb|EEZ53307.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID1] gi|268625404|gb|EEZ57804.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae SK-92-679] gi|268627666|gb|EEZ60066.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae SK-93-1035] Length = 357 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 88/292 (30%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIEK 92 S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q ++ Sbjct: 80 SDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGKR 139 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ Q+ LS LA I V + Sbjct: 140 RNIQASEAEIDAVVAQNPALKNLSPTQRR---------------ELADNIIAEKVRQQAV 184 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 185 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 244 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 245 DQARNGTDFAGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 304 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD E ++ + K + ++ L S A + Sbjct: 305 GWHIIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVDI 356 >gi|91200802|emb|CAJ73856.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 424 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 34/282 (12%), Positives = 87/282 (30%), Gaps = 7/282 (2%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGE---LEKIAVQELIVETLKKQEIEKSGIT 96 ++I ++N E I D+ K + + Q G LEK ++L+ + + +Q + + G+ Sbjct: 142 NKIIASVNEEKILRKDLDKILDRFRKQVPPGAIPSLEKQITEQLVTQAILRQFVREKGLD 201 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 + VN + N + L++ L+ + Sbjct: 202 VADDVVNNEINKMRENIAKNPAAEGKTLEQFLEIQGSNIDELSTAIRMSAALDAYVTNNV 261 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + +E K + ++ + + ++ + +I+ ++ Sbjct: 262 DDKTLENYFIKNINEFTGEEVTASHILIGTKGMKEQEDLDKARAKIESIKKELDNGANFA 321 Query: 217 NKLEKFASKIHDVSIGKAQYLLE-SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274 +K++ + G+ + F N + P T+ G I + + Sbjct: 322 ELAKKYSECPTGKTGGELGSFPRHGVMVETFANAAFSTEVGKVSEPVKTEFGYHLIYVTN 381 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + + + LR NA + Sbjct: 382 H--APAKDVSFDAVKDTVREKLVAIEMGDLINDLRDNAQVEI 421 >gi|295689679|ref|YP_003593372.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caulobacter segnis ATCC 21756] gi|295431582|gb|ADG10754.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caulobacter segnis ATCC 21756] Length = 452 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 43/293 (14%), Positives = 107/293 (36%), Gaps = 19/293 (6%) Query: 39 SSRIRTTINGEVITDGDISKRIALL-------KLQKINGELEKIAVQELIVETLKKQEIE 91 S + +N ++I+ D+ +R+ LL Q+ ++++ A++ LI E L+ QE+ Sbjct: 57 SESVAAVVNDDIISSYDLMQRMRLLMATSGMQPTQENLPQIQQEALRSLIDERLQMQELR 116 Query: 92 KSGITFD------SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + V+ A++ ++++ L +QGIG + ++ L S W Sbjct: 117 RVEKQQKITIISTDKEVDEQVADIAQSNKMTSDQLKQSLVQQGIGLDTWRAQLRADSSWQ 176 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 ++ + + E +I A ++++ + + +F +++ Sbjct: 177 SWIQGRYGSRLRIGEDQIKAYQRRLAESAAKPQYQISEVFLDA-SRVGGMEVAVNGAAQL 235 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQ 264 + +F+ + G ++ + ++ + + L + + P + Sbjct: 236 IAQMQQGAPFAAVARQFSGSATAANGGDVGWVNQGEMPTEVDEALEQLRPGQLSRPIQVK 295 Query: 265 KGVEYIAICDKRDLGGEIALK-AYLSAQNTPTKIE---KHEAEYVKKLRSNAI 313 GV I + DKR + ++A E + + LR Sbjct: 296 DGVYIIYLRDKRAGSKTAIVDLKQVAAPLPADATEAQVAAATKLLTDLRPKIN 348 Score = 79.3 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 2/125 (1%) Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + V K + R ++ E A K+ + G +DL P FQ Sbjct: 327 DATEAQVAAATKLLTDLRPKINSCQTL-ETVAGKVDGLVAGDLGEAEITDLAPAFQEAAS 385 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 K ++P T G+ IA+C KR G + + ++ Y++ LR+ Sbjct: 386 KLDIGQISDPIRTDAGLHLIAVCGKRQGGANAPTHDQIENRLRGQQLALISKRYLRDLRN 445 Query: 311 NAIIH 315 A I Sbjct: 446 QATIE 450 >gi|325139171|gb|EGC61717.1| PPIC-type PPIASE domain protein [Neisseria meningitidis ES14902] Length = 408 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 86/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ ++ K EL + + +L+ ++L Q ++ Sbjct: 131 SDGIAAVADNEVITRRRLAEAVSEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 190 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ ++ LS A I V + Sbjct: 191 RNIQASEAEIDAVVAKNPALKNLSPAQRR---------------DFADNIIAEKVRQQAV 235 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 236 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 295 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 296 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 355 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 356 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 407 >gi|325131574|gb|EGC54281.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis M6190] Length = 405 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 86/292 (29%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92 S I + EVIT +++ ++ K EL + + +L+ ++L Q ++ Sbjct: 128 SDGIAAVADNEVITRRRLAEAVSEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKR 187 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ ++ LS A I V + Sbjct: 188 RNIQASEAEIDAVVAKNPALKNLSPAQRR---------------DFADNIIAEKVRQQAV 232 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 233 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 292 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 293 GEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 352 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD + ++ + K E+ ++ L S A + Sbjct: 353 GWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDI 404 >gi|268602234|ref|ZP_06136401.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID18] gi|268586365|gb|EEZ51041.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID18] Length = 357 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 88/292 (30%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIEK 92 S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q ++ Sbjct: 80 SDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGKR 139 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ Q+ LS LA I V + Sbjct: 140 RNIQASEAEIDAVVAQNPALKNLSPTQRR---------------ELADNIIAEKVRQQAV 184 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 185 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSKNAAVGAESTIRKIY 244 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 245 DQARNGTDFAGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 304 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD E ++ + K + ++ L S A + Sbjct: 305 GWHIIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVDI 356 >gi|124516597|gb|EAY58105.1| putative peptidyl-prolyl cis-trans isomerase [Leptospirillum rubarum] Length = 340 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 111/331 (33%), Gaps = 19/331 (5%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI---- 60 ++ F L + +L+ F VP + + ++ +N +IT ++ + + Sbjct: 1 MYFRYVLFPTLFLSATLLLSFFEVP-PARGERVLVDQVMAVVNHHMITKSELDRSLAPTF 59 Query: 61 ALLKLQKINGELEKIA-------VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 L + ++ + + I E L+ +E E+ G+T + +++ + Sbjct: 60 KKLHKRFRGKAYRELVASLEYKLLMKKINERLELEEAERQGLTVTDDELDHAIESIMQKN 119 Query: 114 GLSAE-DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK--QKM 170 +++ + L +QG+ +KQ L Q +V + E+ + Sbjct: 120 NFTSKWQLKTALSEQGMSYRRYKQQLRKQMTILKLVNQEVRSTVVISPDEVRQYYLAHRD 179 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE-ESRLRLPKDCNKLEKFASKIHDV 229 K +R + IP+ + Q ++ + R + + Sbjct: 180 KYRLPPHVTLRDIFLRIPEGATEAQIQEIRKHGEHIVRQLKRGDDFVILAGSESEGPNAE 239 Query: 230 SIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKA 286 + G L + L Q T+ T G I + + D LKA Sbjct: 240 NGGALGDLTKDQLLPELVQPAFTIPPGQTSGLIQTSNGFYIIKVIKREDNSFRSFKELKA 299 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + T +K +++KLR + + Y Sbjct: 300 QILNDLTKKTTDKRLRIWLEKLREKSYVVIY 330 >gi|326404647|ref|YP_004284729.1| peptidyl-prolyl cis-trans isomerase [Acidiphilium multivorum AIU301] gi|325051509|dbj|BAJ81847.1| peptidyl-prolyl cis-trans isomerase [Acidiphilium multivorum AIU301] Length = 311 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 78/285 (27%), Gaps = 48/285 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI---AVQELIVETLKKQEIEKSG 94 + ++G I D++K L Q N +++ + L+ E + K+G Sbjct: 52 QKDTVVAIVDGHDIHLSDVAKAAQDLPPQLQNAPPQELFPVLLNRLVDERALLVKARKAG 111 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 D + A Q++ ++ Sbjct: 112 TAKDPKVAAE------------------------------MKAAADQALERAYLRALVEP 141 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 K + ++ + +K E R +L Q+ + + K Sbjct: 142 KLTDAAVKAYYDSHYVKAKQPEEVKARQIL-----------VKTQQEAEKIIAQLGKGAK 190 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAI 272 +K++ + G+ + + ++ F + T P +Q G I Sbjct: 191 FSALAKKYSIDPGAKNGGELGWFTKDEMVKPFADAAFALKPGTYTKTPVHSQFGWHVIES 250 Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 KR+ A + Q K ++ R I + Sbjct: 251 QGKREKPV--PPLADVKDQIRQQITNKAVTAALEDARKGLDIKLF 293 >gi|284035738|ref|YP_003385668.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirosoma linguale DSM 74] gi|283815031|gb|ADB36869.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirosoma linguale DSM 74] Length = 458 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 29/309 (9%), Positives = 87/309 (28%), Gaps = 15/309 (4%) Query: 13 IKLLTTYFVLII---FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 +K + + +L + F +P ++I ++ + D+ + Q Sbjct: 1 MKKVISSVLLGLVGWFLTMPAFGQGQGVSLNKIIAKVDNYYVLRSDLEEAYQSYVGQNQT 60 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + ++ L++ + + E + D V+ + + ++ G Sbjct: 61 PPQKCQLLESLVINKMMLAKAEIDSVVVDDKIVDSELDSRMQYMVQQFGSDKNIVEAYGK 120 Query: 130 GDNHFKQYLAIQSIWPDV---VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 K L Q V ++ ++ + ++ + Sbjct: 121 SLEMLKSELRSQVKDQKVVQKMQQKITTDVKVTPRDVRRFYDGIPKDSLPYIPAEVEVGQ 180 Query: 187 IPDNKLQNQGFVQ---KRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 I + + +R+ D ++ ++ + + + G + + Sbjct: 181 IVRFAKPTKEQKEVLRQRLLDMKKRVEAGEDFAKLAKENSEDVGSAQNGGDLGFAKRGMM 240 Query: 243 HPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKH 300 F+ K N ++ + G+ I + + R ++ + Sbjct: 241 VAPFEGAALKLKPNQLSDVVESDFGLHLIQLIETRGA---EYHARHILLRPDYNRLDVSG 297 Query: 301 EAEYVKKLR 309 Y+ LR Sbjct: 298 PTHYLDSLR 306 >gi|83312815|ref|YP_423079.1| parvulin-like peptidyl-prolyl isomerase [Magnetospirillum magneticum AMB-1] gi|82947656|dbj|BAE52520.1| Parvulin-like peptidyl-prolyl isomerase [Magnetospirillum magneticum AMB-1] Length = 421 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 95/284 (33%), Gaps = 11/284 (3%) Query: 15 LLTTYFVLIIFCIVPIVSY--KSWAMSSRIRTTINGEVITDGDISKRIAL-LKLQKINGE 71 +L +++ +V + + RI +N E+I+ D+ R+ L + + + Sbjct: 1 MLARAAIVLSALLVACIPLRPSAAQEVDRIAAVVNDEIISIRDLDARLKLAITVSGLPDN 60 Query: 72 LEK------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 +E +++++ E ++ QE + + ++ V + L Sbjct: 61 IESRRRAVPQVLRKMVDERVQAQEAARLRVAAGADEVARGVANVENQNRMPPGSLLPSLA 120 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 K G+ + K + IW ++ E EI + ++ + + +F Sbjct: 121 KAGVDPDAVKDQIKADIIWVKLIMRTLQPTIRVGEDEITERIETLRQQFGQPEFMLAEIF 180 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 D+ Q ++ + E +F+ + G +L + L Sbjct: 181 LPVDSPRQE-EESKRLGERLIEQLRAGAPFQALARQFSQSGTANNGGVLGWLSAAALEDD 239 Query: 246 FQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + + + + + T G +A+ DKR G L Sbjct: 240 IRETVSRLDKGQVSGLVRTGTGYAILALIDKRVAGESNVSDPKL 283 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 41/104 (39%), Gaps = 3/104 (2%) Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICD 274 C++++ K++ G+ + S L +++ + + P K + + +C Sbjct: 316 CDEMDDLGRKLNSEQSGRRDGVTLSVLPQNIRSVASSLPLHKASAPINMGKALLVLMVCS 375 Query: 275 KRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + G + + + ++E Y++ LR A I + Sbjct: 376 RDENVSKGGLPSREAMRRTIEEERLEMLAKRYLRDLRRAAFIDF 419 >gi|218777935|ref|YP_002429253.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfatibacillum alkenivorans AK-01] gi|218759319|gb|ACL01785.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfatibacillum alkenivorans AK-01] Length = 334 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 102/331 (30%), Gaps = 26/331 (7%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKS---WAMSSRIRTTING-----------EVITDG 54 + F K V + F + + + SR+ +NG E++T Sbjct: 1 MIGFFKGTAILCVSLCFLCASLPAACADDLTEDYSRVVLRVNGMDFHKWEMNLAEILTQD 60 Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 + + A + +I + ++ I L QE +G D V+ F + Sbjct: 61 HMFREGAFFRPSEIPA-FRQAMMESTIWAMLIYQEARAAGEKADPAKVDEFIWSFQKRF- 118 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 S E + L+ + F++ + D + F E E + Sbjct: 119 PSLEAYEKGLEALHVTSEQFRRIAERYVMTQDYLDRKFDPLSKVSEAEAREYYDGHRENF 178 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKR---IKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 +E ++R + + +K K + +++ Sbjct: 179 YQEEMVRASHILVEFKEEDGDRADEKALITAKRIVRKLKKGENFAAAAREYSDCESKKRG 238 Query: 232 GKAQYLLESDLH-----PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIAL 284 G Y+ + DL P + + + P + G + + DK+ G + Sbjct: 239 GDLGYIQKGDLPKAQLKPLEEVVFGMEVGEISEPVESVFGYHILYVEDKKPRTLLGFDEI 298 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K L A+ T + ++ KL+ A I Sbjct: 299 KDKLIAKMTEDRKAAMILDHGTKLKETARIE 329 >gi|171060582|ref|YP_001792931.1| SurA domain-containing protein [Leptothrix cholodnii SP-6] gi|170778027|gb|ACB36166.1| SurA domain [Leptothrix cholodnii SP-6] Length = 464 Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 99/311 (31%), Gaps = 14/311 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--- 71 L+ + +L + S + I +N E++T+ ++ +R+ L+ + Sbjct: 37 LVVSLLMLGLAPASGSAQEGSRQNADYIVAVVNRELVTNSEVQQRVERLEQEAARANAQV 96 Query: 72 -----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 L++ + +LI E + +SG+ D ++ A L+ + L Sbjct: 97 PSRDALQRDVLDQLIDERAQLGVARESGLRIDDAELDRTVASVAAQNQLTVAEMRERLRA 156 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 G+ F+ L + + + + + + ++ +I + + + Sbjct: 157 DGLDYPRFRDNLRDRLLLERLREREVQARLRIVDADIENWLVQQREKSGASNEFNIAQIL 216 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF--ASKIHDVSIGKAQYLLESDLHP 244 I + N R A RL + + S + G+ L Sbjct: 217 IAVPENANVADTAARRAVAVNVLQRLRAGEDFGKLVLELSDASKANGGELGLRRGDALPD 276 Query: 245 QFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKH 300 F ++ P + G + + +++D I ++ + P ++ Sbjct: 277 LFVEAVQPLLAGEVAPQVVRSGAGFHVLKLIERKDATLSIPQTRARHILLRPGPGLSQET 336 Query: 301 EAEYVKKLRSN 311 + + R Sbjct: 337 VIARLAEFRQR 347 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 48/144 (33%), Gaps = 3/144 (2%) Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 ++ + R +L Q + R +F+ G Sbjct: 315 SIPQTRARHILLRPGPGLSQETVIARLAEFRQRILGGRARF-EELARQFSEDGSAAGGGD 373 Query: 234 AQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQ 291 + P+F+ ++ + P V++ GV I + ++R + ++ + + Sbjct: 374 LGWAAPGQFVPEFEQAMQDLQPGGLSAPVVSRFGVHLIQLIERRQVSLDVRQQREVARNA 433 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIH 315 K E+ E+ + +R+ A + Sbjct: 434 LREQKYEETYLEWSRDVRARAYVE 457 >gi|90422049|ref|YP_530419.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisB18] gi|90104063|gb|ABD86100.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisB18] Length = 310 Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 76/305 (24%), Gaps = 47/305 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---SKRIALLKLQKINGE 71 + C++ + + +NG+ I D+ + + Q Sbjct: 13 RFGLACAALTGCLLLAGLPARAQDADPVLAKVNGQEIRQSDVAIAEEELGPSLAQMDPAT 72 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + LI + + E I + R + Sbjct: 73 KTDNVLSFLIDLKIVAKAAEDKKIADREDFKAKLAFARNRLLMDNLLAVEGKAATTDAAM 132 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 A Q V+ +L E + Sbjct: 133 KKVYDDAAKQITGETEVRARHILVETEDEAKA---------------------------- 164 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 E+ + +K + G + + + P+F ++ Sbjct: 165 -------------IEDELKKGADFAELAKKKSKDPGASDGGDLGFFTKDQMVPEFSSVAF 211 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 ++P +Q G I + +KR+ A + AQ K +A+YV KLR Sbjct: 212 ALEPGKISDPVKSQFGWHIIKVEEKRNRKA--PDFAQVKAQIETYVTRKAQADYVTKLRE 269 Query: 311 NAIIH 315 A I Sbjct: 270 TAKIE 274 >gi|212702600|ref|ZP_03310728.1| hypothetical protein DESPIG_00626 [Desulfovibrio piger ATCC 29098] gi|212674041|gb|EEB34524.1| hypothetical protein DESPIG_00626 [Desulfovibrio piger ATCC 29098] Length = 320 Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 111/318 (34%), Gaps = 25/318 (7%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQKINGELE 73 L +LI+ + + A ++I +NG+VIT D+ K L + + + + Sbjct: 9 LKKSALLILMAWLCLACTAQAAQLNKIAAVVNGQVITMFDLQKAALPELGRARLNPNDPK 68 Query: 74 KI---------AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + + +I++ L +QE ++ IT + ++ + + ++ F + L Sbjct: 69 QADKVNVVFRKVLDSMIMDILLEQEAKRLSITASDSEIDQELTKMMKMRRMNRAQFEAEL 128 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 KQG+ + ++ + + V+ + + + EI A +K K+ + L Sbjct: 129 KKQGMSVDELRKTMKTNMLRQRVMGAEVGRRVVVTDDEIRAYYEKHKDTMYDRNGLHMGL 188 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 N + K++ + G + L+P Sbjct: 189 IVYNPNVNARSIAA--------QIASGSLSFEEAARKYSIAPNREKGGDMGPVEWGRLNP 240 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIE 298 ++++ K + T+ + Q + + G + + K Sbjct: 241 EWESRLEKMKPGDVTDIFTVQGHKAQVHLFRPGQSGPGRPMTFEEARPVIDNILRQPKAM 300 Query: 299 KHEAEYVKKLRSNAIIHY 316 + EY ++LR+ A+I Sbjct: 301 ERFDEYSQQLRNKAVIDI 318 >gi|89067389|ref|ZP_01154902.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oceanicola granulosus HTCC2516] gi|89046958|gb|EAR53012.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oceanicola granulosus HTCC2516] Length = 280 Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 85/302 (28%), Gaps = 50/302 (16%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---SKRIALLKLQKINGELE 73 T + + + +S + T+NG IT G++ ++ Q + L Sbjct: 4 TLRLLASATLAAGLSTAAVAQEASDVVATVNGTDITLGELIIAKAQLPQQYQQLPDDVLF 63 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 V +LI + L +++ S N Sbjct: 64 DGLVDQLIQQQLLSDQLDASPERVQLALKNEE---------------------------- 95 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + ++ + EY +L Sbjct: 96 ------RSLRAGEAITRITEEAVSEEALQAAYEARFADAEPQTEYNASHILV-------- 141 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK- 252 ++ + E++R + ++ + G+ + E + +F + + Sbjct: 142 --ETEEEAVALTEQARAEGADFAELARENSTGPSGPAGGELGWFGEGMMVQEFYDAVVAL 199 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + P TQ G I + + R E+ L + T ++ + + +L + A Sbjct: 200 EPGDVSEPVQTQFGWHVIKLNETR--LSEVPPLESLRGELTSELQQQAVEDALAELEAGA 257 Query: 313 II 314 + Sbjct: 258 DV 259 >gi|323143364|ref|ZP_08078052.1| PPIC-type PPIASE domain protein [Succinatimonas hippei YIT 12066] gi|322416882|gb|EFY07528.1| PPIC-type PPIASE domain protein [Succinatimonas hippei YIT 12066] Length = 457 Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 100/324 (30%), Gaps = 16/324 (4%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + S F + L + + I + +N ++I ++ Sbjct: 1 MVYLVKSKKGF-NMFGKRIALALTAALGIAFNANAQTLDTTAAVVNNDIILTSELDAMQK 59 Query: 62 LLKL-------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 + Q K A+++LI ++L Q+ G+ + ++ Q A G Sbjct: 60 EMAANFASRGQQVSPVNARKAALEQLITKSLILQQARTHGLNLNDMQLDQALEQFAARNG 119 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 +S + + G+ + ++ I +V +N + + E+ + +K + Sbjct: 120 VSVKTLLDQMGP-GLSEAAQRERFREDLIIGEVRRNQVRNRIKISDSEVKLLAKNLKQLG 178 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIK---DAEESRLRLPKDCNKLEKFASKIHDVSI 231 E +P VQ+ + + + + + Sbjct: 179 SVEPSYHLSQLIVPLAANATSAQVQRAVNTVDKIKADLRKGADFNDLAALYTQGSLAAQG 238 Query: 232 GKAQYLLESDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIA---ICDKRDLGGEIALKAY 287 G Y+ ES + P +LLK P + G+ I + D + ++ Sbjct: 239 GDLGYIPESRVPVPFLPSLLKSKPGAVIGPIRSPYGLHLIKYVGVTDGAVKTITMYDASH 298 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSN 311 + + ++ + + LR Sbjct: 299 ILLTTSIVYPDETAVKELNLLRDE 322 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 40/125 (32%), Gaps = 3/125 (2%) Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 ++ V++ +E + + F+ ++ G Y P F + Sbjct: 308 PDETAVKELNLLRDEILKGAISFSDAAKNFSEDPGSAINGGDLGYATPDRYDPAFAAAMV 367 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + P + G I + D + DL + + + + + ++LR Sbjct: 368 RLKPGEISEPVRSSFGYHLIKLNDIKTDLDSDASYEDQARNLIFERLFREESIAWERELR 427 Query: 310 SNAII 314 A I Sbjct: 428 DTAYI 432 >gi|268682955|ref|ZP_06149817.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID332] gi|268623239|gb|EEZ55639.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID332] Length = 357 Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 88/292 (30%), Gaps = 29/292 (9%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIEK 92 S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q ++ Sbjct: 80 SDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGKR 139 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ Q+ LS LA I V + Sbjct: 140 RNIQASEAEIDAVVAQNPALKNLSPTQRR---------------ELADNIIAEKVRQQAV 184 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M E EI A ++ + R I + + I+ Sbjct: 185 MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIY 244 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ + G + + + P F+ + P TQ Sbjct: 245 DQARNGTDFTGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQF 304 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + + RD E ++ + K + ++ L S A + Sbjct: 305 GWHIIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVDI 356 >gi|281356754|ref|ZP_06243245.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Victivallis vadensis ATCC BAA-548] gi|281316881|gb|EFB00904.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Victivallis vadensis ATCC BAA-548] Length = 314 Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 43/293 (14%), Positives = 91/293 (31%), Gaps = 18/293 (6%) Query: 40 SRIRTTINGEVITDGDI-----SKRIALL------KLQKINGELEKIAVQELIVETLKKQ 88 + + ++NGE I+ D+ + +L + ++ + V +LI L Sbjct: 24 NSVLASVNGEPISLWDVLPATRQQEYQAYAAYSGDRLYEAIRQIRRKTVDDLIDRKLLIA 83 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ-SIWPDV 147 + + + A G A ++ + + I + Sbjct: 84 DYRDKPFEISNQEIEAELDNIAERMGYRARSEFIREAREAGSSLEKIRKNVEESLIVQLM 143 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + EI + V+ I L + ++ + + ++ Sbjct: 144 IFRRIHVAENVTPKEIYEYYKAHSEEFVKPETIELGLLLLSPDRKDLEAVTAEIS---KK 200 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKG 266 +++S + G + L P+F + + P T G Sbjct: 201 LAADPENFAALARQYSSGPDAENGGNLGLIERRRLRPEFAAAIPSPEKGKVCGPIRTGDG 260 Query: 267 VEYIAICDKRDLGGEIALK--AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 V ++ + + K + + K EK EYVK+LR NAII Y+ Sbjct: 261 VSFLKVLNHNPAERREFRKLTPEIRRRIEQDKREKIRDEYVKQLRQNAIIRYF 313 >gi|83945293|ref|ZP_00957642.1| peptidyl-prolyl cis-trans isomerase family protein [Oceanicaulis alexandrii HTCC2633] gi|83851463|gb|EAP89319.1| peptidyl-prolyl cis-trans isomerase family protein [Oceanicaulis alexandrii HTCC2633] Length = 411 Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 97/280 (34%), Gaps = 9/280 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 + +L ++ S I +N + IT D+ R+ L+ Sbjct: 1 MAFRLALTILAGIALMSAAPTASAQQVEGIAAVVNDQPITTLDVRDRMRLIISSAGVQPT 60 Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 ++ +++ L+ ETL+ Q+ + + + V+ A +G + ++ L Sbjct: 61 EEMLARIQDQSIRGLVDETLQLQQAAEFDLEVEEAEVDDAIADIATRSGATVQEVEDDLA 120 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 GI N +Q + + W +V + + + +I + + +F Sbjct: 121 ASGIDINTLRQQVKAEIAWQILVSGRYRSRIRISDQQIETALDRYIQSASQPQYRLGEIF 180 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 + + V ++ R + ++F+ + G YL S ++ Q Sbjct: 181 VEITPQGGEERAVGIIQTIYDQLR-QGAPFQAVAQQFSDAASASAGGDTGYLPLSGINAQ 239 Query: 246 F-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 + + + +NP G + +A+ D+RD L Sbjct: 240 VAEAVTQMEPGQISNPIRVPGGFQIVALIDRRDGQVIEQL 279 Score = 37.0 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 34/101 (33%), Gaps = 4/101 (3%) Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY-VTQKGVEYIAICDK 275 ++ ++G + L P ++ L + P T G + +CDK Sbjct: 313 DEAMSDVEGAFVTNLGDVG---ANALVPTIRDALGGLEPVAATPVLDTAAGAQVFVLCDK 369 Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G + + Q ++ +++ LR +A I Sbjct: 370 ALTGPGVPSADQIENQLINQQLSLLSRRWLRDLRRDATIEI 410 >gi|114778682|ref|ZP_01453494.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mariprofundus ferrooxydans PV-1] gi|114551044|gb|EAU53606.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mariprofundus ferrooxydans PV-1] Length = 570 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 101/294 (34%), Gaps = 15/294 (5%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING---------ELEKIAVQELIVET 84 I +N E IT + + ++ Q EL + ++ LIV+T Sbjct: 17 AQAEEFDSIAAVVNNEAITCSQVDQDAQIMLTQLHQSGSTFIPAASELNQRSLDGLIVKT 76 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 L+KQE K + ++ A + L+ + + +++QG+ + ++ L Q + Sbjct: 77 LQKQEARKLELKVSDEELDDAIKNVAASNNLTPDQLKAAVEQQGMHYDEYRSNLREQILK 136 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ---KR 201 +V K E + +K ++ + + ++ Sbjct: 137 NKLVNVAVRSKIQVSEEAVQEYYRKYLEHPKPRREVKLAQLFLSLPSEPTPEQLAVTRQK 196 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY 261 I++ + L + ++ G + ++ + +F + L+ ++P Sbjct: 197 IRNIHQQLLAGKDFAQMVAIYSESPDRQQQGVMGWFMQGGVAQRFASALEMPVGQISDPI 256 Query: 262 VTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVK-KLRSNA 312 + G + + +R D + A++ K+ + K K+R A Sbjct: 257 RSPSGFHILKVLAERWKDPQNTGVSYDEVHARHILLKVPSYADAATKAKIRQRA 310 Score = 93.2 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 50/160 (31%), Gaps = 6/160 (3%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL--- 219 + ++ E R +L +P ++ +A L+ D Sbjct: 270 ERWKDPQNTGVSYDEVHARHILLKVPSYADAATKAKIRQRAEAISHDLQGASDAQFAVRA 329 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR-- 276 ++ + G + + + P F+ T+ P + G I I +R Sbjct: 330 KEDSQGPSAERGGDLGWFKKGAMVPAFEKAAFAMKPGETSGPVESPFGFHIIRIVARRHI 389 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 D A + + T + ++ ++ LR+ A I Sbjct: 390 DPNSLQAHRDQIQQILTNVETQEQLPRWIASLRAEANIDI 429 >gi|315127730|ref|YP_004069733.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Pseudoalteromonas sp. SM9913] gi|315016244|gb|ADT69582.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Pseudoalteromonas sp. SM9913] Length = 431 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 105/317 (33%), Gaps = 19/317 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 + L ++ + ++ + ++ +N VI ++ + +K Q Sbjct: 1 MNLKKLLTSAVLTFSLCQSAFAAPVEIDKVIGIVNQGVILKSEVDTIVDRVKKQAEKQNQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L A++ L+ +TL Q E+ G+ + ++ A+ G + D + Sbjct: 61 QLPKDETLRVQAIERLVNQTLMMQMAERMGLEISDSQLDQTLANMAKEQGGTIADLRRTI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRT 182 + G +++ + + V + + + + EI + EY I Sbjct: 121 EASGESFQAYREEIRKEITTQQVTRANVDRRIYVSDQEIDNLLKIMDSQGQNAEEYDIGH 180 Query: 183 VLFSIPDNKLQNQGFVQK-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 +L IP + K R E + +S + G+ ++ ++ Sbjct: 181 ILIDIPSGAAADDVSSAKTRADKVIELLEDGQEFKRIAISSSSGSKALEGGQLGWMGINE 240 Query: 242 LHPQFQNLLKKSQNN-TTNPYVTQKGVEYIAICDKRD---LGGEIALKAYLSAQ----NT 293 + F +K + + P + G I + D R + ++ + + Sbjct: 241 MPSLFAEAVKGKKKDAIIGPLRSGAGFHIIKVQDVRGRQVVETTEVKSRHILIKPSIILS 300 Query: 294 PTKIEKHEAEYVKKLRS 310 K A +VK LR+ Sbjct: 301 EEKARTMLAGFVKDLRA 317 Score = 73.6 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 52/158 (32%), Gaps = 3/158 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + + + + + P L + ++ R ++ Sbjct: 270 IKVQDVRGRQVVETTEVKSRHILIKPSIILSEEKARTMLAGFVKDLRAGDVDFAELAKEH 329 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL-G 279 + + G+ + + P F++ L +N + P+ +Q G + + DKR Sbjct: 330 SQDPGSALKGGQYDWTDPTTYVPAFRDTLLSLDKNEISEPFRSQFGWHIVQLLDKRVADK 389 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 E A + K ++ + +++R A + + Sbjct: 390 TEQAKRNRAHGMLFNRKFKEESFNWQQEMREQAHVEIF 427 >gi|251772781|gb|EES53343.1| putative peptidyl-prolyl cis-trans isomerase [Leptospirillum ferrodiazotrophum] Length = 382 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 92/296 (31%), Gaps = 18/296 (6%) Query: 40 SRIRTTINGEVITDGDISKRIALL-----------KLQKINGELEKIAVQELIVETLKKQ 88 I +N IT ++ + + ++ LE + + I E L+ + Sbjct: 70 DSIMAVVNHHSITKSEVDRELKPTFEKIHATYQGPAYMQLVASLEYNVMMKKINERLELE 129 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E ++ G++ + V++ + + + L QG+ +++ L Q + Sbjct: 130 EADRLGLSVTDDEVDHAIDDIMQKNNIQERWQLKNALASQGLTFRQYRKKLKKQLTVMKL 189 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR---TVLFSIPDNKLQNQGFVQKRIKD 204 V + E+ K ++ + L + V+K+ + Sbjct: 190 VNQEVRSTVVISPEEVRDYFLKHRDEYRLPAHVSLADIFLALPENPTPAQIAEVRKKGEH 249 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVT 263 R + + S G L + L T+ T Sbjct: 250 VLRQIGRGDDFEMLAGSESQGPNAESGGALGNLTKDQLLPELIGPAFSVPVGKTSGLIQT 309 Query: 264 QKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 +G I + + + +K + T EK +++KLR+++ + Y Sbjct: 310 DRGFYIIKVLAREAQPYQKFDDIKQTILNTLTKKTTEKRLRLWLEKLRAHSYVAIY 365 >gi|319898728|ref|YP_004158821.1| Peptidyl-prolyl cis-trans isomerase [Bartonella clarridgeiae 73] gi|319402692|emb|CBI76238.1| Peptidyl-prolyl cis-trans isomerase [Bartonella clarridgeiae 73] Length = 319 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 71/292 (24%), Positives = 115/292 (39%), Gaps = 6/292 (2%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEI 90 + + T+NG IT DI +RIA LKLQ+ G L A ELI E LK EI Sbjct: 27 FFTSQVFAQTSVVVTVNGNPITSYDIQRRIAFLKLQQKQGNLAAQAKNELIDEALKNNEI 86 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 ++ I + V F A ++ + + L + + HFK Y+ Q W +V Sbjct: 87 KRRNIEVSKDEVESAFKNFALQNNMTVDQLNQMLAQTDVTVEHFKTYILGQMGWGRLVNA 146 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + G L + A++ T+ I + + ++ K Sbjct: 147 RYQAEGGVLTEQETAHRILKNGGVKPSTNEYTLQRIIFVIPEHRRSAILEKRKKEANKFR 206 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEY 269 C+ + A I DV+I LE L ++ + + TN TQ G+E Sbjct: 207 ANFHGCHNAQNQAKSILDVTIRHLGKFLEPQLPQNWEKAILATPAGKMTNFQETQYGIEA 266 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTK-----IEKHEAEYVKKLRSNAIIHY 316 +AIC + + + + S Q+ K +E +Y+K+LR A I Sbjct: 267 LAICQIKRVSDDRVARLIFSIQDHQKKDIPQLLEALSEKYLKELRQTAHIQN 318 >gi|254504552|ref|ZP_05116703.1| PPIC-type PPIASE domain protein [Labrenzia alexandrii DFL-11] gi|222440623|gb|EEE47302.1| PPIC-type PPIASE domain protein [Labrenzia alexandrii DFL-11] Length = 282 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 85/309 (27%), Gaps = 48/309 (15%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69 ++ + I + + S A + + VIT+ DI+ L + Sbjct: 1 MRRPIKALAVSIMALTLGSASLSAAEPDDVVAKVGDAVITEADIAFAAQDLGQELQRFPA 60 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + ++ + +I L + G+ D + Sbjct: 61 AQWRQLLLDVMIDMELLALAAKNDGLDQDPDFKKQL------------------------ 96 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 ++L ++++ + + +++ +K+ + E R +L Sbjct: 97 ------EFLELRALRNAYLGQKINASITDADVKTAYDKEFAEFEGPEEINARHIL----- 145 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + ++ ++ + G Y + + P F+ Sbjct: 146 ------VEDKAAAEALIAELDGGADFAELAKEKSTGPSGPNGGDLGYFAKGQMVPPFEEA 199 Query: 250 LKK-SQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + T P TQ G I + DKR E + A + + + Sbjct: 200 AFALEPGSFTKEPVETQFGWHIIKVEDKRRQ--EKPALDTVEANLRQQLARERYEARMVE 257 Query: 308 LRSNAIIHY 316 L+ + Sbjct: 258 LKDEYAVEI 266 >gi|319404053|emb|CBI77641.1| Peptidyl-prolyl cis-trans isomerase [Bartonella rochalimae ATCC BAA-1498] Length = 319 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 117/292 (40%), Gaps = 6/292 (2%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEI 90 + + T+NG IT+ DI +RIA LKLQ+ G L A +LI E LK EI Sbjct: 27 FFTSQAFAQTSVVVTVNGSAITNYDIQRRIAFLKLQQKQGNLATQAKNDLIDEVLKNNEI 86 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 ++ I ++ V F A ++ + + L + + HFK Y+ Q W +V Sbjct: 87 KRRNIEVSTDEVENAFENFAAQNNMTVDQLNQMLTQTDVTVEHFKAYILGQMGWARLVNA 146 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + G + + + + T+ I + + ++ K Sbjct: 147 RYQAEGGVITEQEASQRILKNGGVKPSTNEYTLQQIIFVIPEHRRSAILEKRKKEANKFR 206 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEY 269 + CN + A I D++I LE L ++ + + TN TQ G+E Sbjct: 207 ANFQGCNSAKNQAKGILDITIRHLGKFLEPQLPQNWEKAILATPAGKMTNFQETQNGIEA 266 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTK-----IEKHEAEYVKKLRSNAIIHY 316 +A+C + + + + S Q+ K +E +Y+K+LR A I Sbjct: 267 VAVCQIKRVSDDRVARLIFSIQDHQKKNIPQLLEALSEKYLKELRQTARIQN 318 >gi|254485739|ref|ZP_05098944.1| ppic-type ppiase domain protein [Roseobacter sp. GAI101] gi|214042608|gb|EEB83246.1| ppic-type ppiase domain protein [Roseobacter sp. GAI101] Length = 282 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 88/308 (28%), Gaps = 58/308 (18%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMS----SRIRTTINGEVITDGDISKRIALLKLQKI---N 69 + L F + +S + A + T+NG IT G + A L Q Sbjct: 3 KSLTFLAPFVVAASLSLPAMAQEEVKADTVVATVNGTEITVGHMIIARATLPEQYQQLPP 62 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 L K + +L+ +T + SF Sbjct: 63 EVLFKGILDQLVQQTALE---------------------------------QSFEGDVPA 89 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + Q I +V++ ++ ++ E+ +L + Sbjct: 90 RVALSLENERRQLIAGEVIEKAMAADISAEDLAAAYEEEYGSAEPTEEFNASHILVETEE 149 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + L + + ++ ++ S G + + P F+ Sbjct: 150 DALAVKAEID-----------GGADFAETAKEKSTGPSGPSGGSLGWFGPGMMVPAFETA 198 Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 ++ + P TQ G I + DKR D ++K L Q K ++ + Sbjct: 199 VQDLEVGAVSMPVETQFGWHIIKLEDKRLKDAPALESVKEELELQLRQVKAQEK----IT 254 Query: 307 KLRSNAII 314 ++ A + Sbjct: 255 EMTDAADV 262 >gi|194332867|ref|YP_002014727.1| SurA domain [Prosthecochloris aestuarii DSM 271] gi|194310685|gb|ACF45080.1| SurA domain [Prosthecochloris aestuarii DSM 271] Length = 439 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 30/308 (9%), Positives = 96/308 (31%), Gaps = 16/308 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN----GE 71 L + C + ++ A RI + E++ +I ++ + +LQ + Sbjct: 6 FRILVALALLCFAGVPVLRA-ATVDRIVAIVGNEIVLQSEIEQQAVMTELQYPEMAKAKD 64 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L + L+++ + + + + + ++ + Sbjct: 65 LRGRILDNLVMQKIVLTKARLDSVNVNESDIDKQTDERLMFLRSRFPSIEEMEKTFSKSY 124 Query: 132 NHFKQYLAIQSIWPDVV-----KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 ++ + ++ + + E+E + + + ++ E + + + Sbjct: 125 AMIEKEIKDDIRNQQLIDNLRRQKMSGVTVSYDEVEDFYRQHRDELPSIPESVQISQIIM 184 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQ 245 P +N+ + I+D ++ L +++ G Y + Sbjct: 185 YPQVTPENKAKARSLIEDVQQRLLEGADFDEMARRYSQDPGSAEVGGDLGYSKRGEFVKP 244 Query: 246 FQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAE 303 ++ + ++ G I + +K G+ ++ A T E Sbjct: 245 YEEAAFSLKDGEISAIVESRFGYHIIQLLEK---EGDRVHTRHILAVFDRTTLDRDAAKE 301 Query: 304 YVKKLRSN 311 ++++RS+ Sbjct: 302 KLEEIRSD 309 >gi|251794480|ref|YP_003009211.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. JDR-2] gi|247542106|gb|ACS99124.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. JDR-2] Length = 392 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 26/305 (8%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K ++ ++ ++ + + T+NG IT K L Q L+ Sbjct: 74 KAWIAVSAILAIVLIIVLIKPPFGAGDKAVATVNGAKITK---DKLYDSLVEQGGKSTLD 130 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + ELI + + +T V+ ++ G E + Sbjct: 131 NMITTELIDQ-----AAADAKVTVTEADVDKEIENLKKSFGSEDEFNQTLAQ-----YGM 180 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 L + ++ + + +I A K IR + + Sbjct: 181 TVDSLREDAEVQVKIRKILEPQVKVTDDDIKAYYDANKASMSTPEQIRASHILVATKEEA 240 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 D + ++ ++ + G + + + P F++ Sbjct: 241 E---------DILKQLKAGADFATLAKEKSTDTGTKDNGGDLNFFGKGSMEPAFEDAAFA 291 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + T G I D++ K + Q K+ + + ++ L+ Sbjct: 292 LKKGELSGVVQTSYGYHIIKKTDEKAAVTPTLEEKKEDIKYQLVTQKVSELSSTWMADLK 351 Query: 310 SNAII 314 + A I Sbjct: 352 AKAKI 356 >gi|24375136|ref|NP_719179.1| survival protein surA [Shewanella oneidensis MR-1] gi|81744686|sp|Q8EB95|SURA_SHEON RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|24349906|gb|AAN56623.1|AE015799_10 survival protein surA [Shewanella oneidensis MR-1] Length = 434 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 103/317 (32%), Gaps = 19/317 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +K + + + + R+ IN ++ + +I+ I +K Sbjct: 1 MKPSKHLIFALFALAISQPTMAAPQPLDRVAVQINDGIVLESEITNMIDTVKANAKAANQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L ++ LI+ L+ Q ++ G+ ++ AR ++ + Sbjct: 61 SLPSDSALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKMTVAQMQQKI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 +GI + +++ L + ++ + + EI + ++ +++ + Sbjct: 121 ASEGISFSQYREQLREEITLGEIQRIQVQRRIQVSPQEITGLVKLIQEQGMKDVEYQIGH 180 Query: 185 FSIPDNKLQNQGFVQ---KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I ++ KR E +S + G Y+ ++ Sbjct: 181 ILIDVPNNPTSEQLEASSKRANAVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMNINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQ----NT 293 + F + + + + P T G I I D R E ++ + + Sbjct: 241 MPTLFAEVINGAKKGDIIGPIKTGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSPILS 300 Query: 294 PTKIEKHEAEYVKKLRS 310 + + +++K++RS Sbjct: 301 EDRAKAMLEQFLKQIRS 317 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 84/295 (28%), Gaps = 29/295 (9%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI---TFDSNTVNYF 105 E IT G+I + ++Q E+ + LI E K + G +N + Sbjct: 136 EEITLGEIQRIQVQRRIQVSPQEITGLVK--LIQEQGMKDVEYQIGHILIDVPNNPTSEQ 193 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGD-------------NHFKQYLAIQSIWPDVVKNDF 152 ++ E S D + + + +++ +V+ Sbjct: 194 LEASSKRANAVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMNINEMPTLFAEVINGAK 253 Query: 153 MLKYGNLEMEIPANKQKMKN-------ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + E R +L +++ Sbjct: 254 KGDIIGPIKTGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSPILSEDRAKAMLEQFL- 312 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 ++ R K + +++ G+ + S P+F L S + + P+ T Sbjct: 313 KQIRSGEAKFEDLARQYSEDPGSATKGGELGWAEPSIYVPEFAQTLNSLSPDQISEPFRT 372 Query: 264 QKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + ++R + K + ++ ++R++A I + Sbjct: 373 THGWHITQLEERRKTDATDQFNTNRAHQLIFRRKFNEELQNWLDEMRADAYIEVF 427 >gi|127511815|ref|YP_001093012.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella loihica PV-4] gi|126637110|gb|ABO22753.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella loihica PV-4] Length = 434 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 104/310 (33%), Gaps = 15/310 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---- 68 +K ++ + + R+ IN ++ + +I + +K Sbjct: 1 MKPCKQLIFALLTLAMSHGAMAENVPLDRVTVQINEGIVLESEIVNMLKTVKANAKAAGQ 60 Query: 69 ----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + L ++ LIV L+ Q ++ G+ ++ A+ ++ E + Sbjct: 61 SLPSDKALRTQVIERLIVTRLQLQMADRIGLHIGDLQLDQTIENIAKEQKMTPEMMREKV 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + +G+ + +++ L + ++ + + EI + + ++ +++ + Sbjct: 121 EAEGMSWSQYREQLREEITLGEIQRIQVQRRIQVSPQEINSLVKLIEEQGMQQVEYQIGH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESD 241 I N ++ A RL + + +S + G Y+ ++ Sbjct: 181 ILIEVPNSPNSEQLEAASSRANAVLKRLQDNADFKQTAIASSSGPKALEGGIWDYMNVNE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297 + F + L+ + P + G I + D R + ++ + +P Sbjct: 241 MPTLFAELLVGAKTGDIIGPVRSGAGFHIIKVMDARGLQTKEIDEVRSRHILIKPSPILS 300 Query: 298 EKHEAEYVKK 307 E+ + K Sbjct: 301 EERAKAMLDK 310 Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 79/294 (26%), Gaps = 27/294 (9%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS--------- 99 E IT G+I + ++Q E+ + LI E +Q + G Sbjct: 136 EEITLGEIQRIQVQRRIQVSPQEINSLVK--LIEEQGMQQVEYQIGHILIEVPNSPNSEQ 193 Query: 100 --------NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 N V +A + S +G ++ +V Sbjct: 194 LEAASSRANAVLKRLQDNADFKQTAIASSSGPKALEGGIWDYMNVNEMPTLFAELLVGAK 253 Query: 152 FMLKYGNLEM-----EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 G + I + + + + P L + K A Sbjct: 254 TGDIIGPVRSGAGFHIIKVMDARGLQTKEIDEVRSRHILIKPSPILSEERAKAMLDKFAA 313 Query: 207 ESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 + R +++ G+ + + P F L N + P+ + Sbjct: 314 QLRRGEADFATLARQYSEDPGSAAKGGELGWADPTVYVPAFAQTLGALKINEISEPFRSS 373 Query: 265 KGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + + ++R + K + ++ ++R+ A I + Sbjct: 374 HGWHIVQLEERRKTDATDKFNTNRAHQLIFRRKFNEELQNWLDEMRAEAYIEVF 427 >gi|87119766|ref|ZP_01075663.1| peptidyl-prolyl cis-trans isomerase SurA [Marinomonas sp. MED121] gi|86165242|gb|EAQ66510.1| peptidyl-prolyl cis-trans isomerase SurA [Marinomonas sp. MED121] Length = 416 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 94/304 (30%), Gaps = 10/304 (3%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI----NG 70 + +L ++ + I I+ + I D DI+ R +++K + N Sbjct: 1 MNKIATLLCSSLLIASSFSVAATKVDGISAIIDSKAILDSDINTRFSIIKDRVPGGKIND 60 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + + + ++I ETL+ + GI N + A L L +QGI Sbjct: 61 NVRRQILNQMINETLQTNYANRLGIRISEQEANQAVLNVAAKMKLDLAGLKVALAQQGID 120 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + ++ + + + V + + EI + + + I DN Sbjct: 121 YSIYRNQIKNEILLGKVKGQVVRQRIIISDQEIEDFLNSDEALAKNNDQVHLRHILIRDN 180 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250 +I +E ++ ++S + G + + L F L Sbjct: 181 ASS---QSADQILTIKEKITNEQDFIDQAIAYSSGQAALEGGDLGWRPLNQLPLLFIKSL 237 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKK 307 + P + G + + +K+ E ++ + + ++ Sbjct: 238 NANNGPLYGPIESSAGQHLLWLKEKKTASNALQEQTKSRHILLSANEIRNQTQTKAALEA 297 Query: 308 LRSN 311 + Sbjct: 298 IYQR 301 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 31/270 (11%), Positives = 89/270 (32%), Gaps = 7/270 (2%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 +I+D +I + + N + + LI + Q ++ + T F+ Sbjct: 147 IISDQEIEDFLNSDEALAKNND-QVHLRHILIRDNASSQSADQILTIKEKITNEQDFIDQ 205 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 A + ++ + + G + K+K Sbjct: 206 AIAYSSGQAALEGGDLGWRPLNQLPLLFIKSLNANNGPLYGPIESSAGQH---LLWLKEK 262 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHD 228 + ++ + N+++NQ + ++ + ++ ++F+ Sbjct: 263 KTASNALQEQTKSRHILLSANEIRNQTQTKAALEAIYQRLMKGQDFATLAKEFSEDKGSA 322 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKA- 286 + G + + + P+F+ ++K + + P+ +Q G + + +R +K Sbjct: 323 LKGGDLDWTAKGTMVPEFEAVMKATSVGEISKPFRSQYGWHILKVEGRRSQDISDKIKQV 382 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + ++++ +L+S A I Sbjct: 383 NAKNTLIARKQDLVLSQWLDELKSTAFIDI 412 >gi|73540204|ref|YP_294724.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha JMP134] gi|121956447|sp|Q475Q3|SURA_RALEJ RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|72117617|gb|AAZ59880.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha JMP134] Length = 499 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 29/305 (9%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVETLKK 87 + + +N VIT ++ R ++ Q L ++ LI+E ++ Sbjct: 79 SQLVDEVVAVVNNSVITRRELLDRADEIEAQLRTANRPAPPRADLLGEVLERLIMERVQT 138 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 Q + +GI ++ A+ LSA + ++ G+ ++ L Q + Sbjct: 139 QAAQDAGIKVTDQELDRAIESVAQQNRLSATELRRRVEASGMTWTKYRDELRKQVQVIRL 198 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITV------REYLIRTVLFSIPDNKLQNQGFVQKR 201 + + K + EI + + ++ + + +QK+ Sbjct: 199 REREVDSKVQVYDGEIDNYLAARGGQGAAATGPTEFNVSQILVRVPENASDAQKQELQKK 258 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP- 260 + + + + G + L F N + Q P Sbjct: 259 AEQLLKQAQGGADFAQLAQANSQGPEAAQGGAIGFREIGRLPALFANAVVDLQPGAVAPE 318 Query: 261 -YVTQKGVEYIAICDKR-------------DLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 + G + + KR ++ + P E + Sbjct: 319 VVESANGFHILKLTAKRVAPASTSASSPAAASRITQTQVRHILIRTGPNMPEAEARRQLG 378 Query: 307 KLRSN 311 LR Sbjct: 379 TLRDR 383 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 56/140 (40%), Gaps = 2/140 (1%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 + I + ++++ + + ++F+ + G+ ++ Sbjct: 354 QTQVRHILIRTGPNMPEAEARRQLGTLRDRITHGGDFADAAKRFSQDGSAQAGGELGWVS 413 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTK 296 +L P+F+ + + + P VTQ GV I + ++R+ + + A+ K Sbjct: 414 PGELVPEFEQAMNRLRPGEISEPVVTQFGVHLIQVENRRETEMAPEKQRDFARAEIREQK 473 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 + ++V++LRS A + Y Sbjct: 474 LRAAYDDWVRQLRSQAYVEY 493 >gi|163750061|ref|ZP_02157304.1| survival protein surA [Shewanella benthica KT99] gi|161330118|gb|EDQ01100.1| survival protein surA [Shewanella benthica KT99] Length = 434 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 102/314 (32%), Gaps = 15/314 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK----- 67 +K + I+ + ++ R+ IN ++ + +I+ + +K Sbjct: 1 MKPCKHLIIAILSLAMSHMALAENTTLDRVSVQINEGIVLESEITNMVKTVKANATAAGQ 60 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + L ++ LI+ L+ Q ++ G+ ++ A+ L+ E + Sbjct: 61 SLPSDQALRTQVIERLIMTRLQMQMADRIGLHIGDLQLDQTIGNIAKEQKLTVEQMRQKI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 +G+ +++ L + ++ + + EI ++ +++ + Sbjct: 121 SNEGMNWGQYREQLREEITLGEIQRIQVQRRIQVSPQEISNLVNMIEEQGLKQIEFQIGH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESD 241 I ++K A R+ + ++ + G Y+ ++ Sbjct: 181 ILIEIPNNPTSEQLEKASNRANTVLDRVKDSGDFRRMAIAASAGPKALEGGIWDYMNINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297 + F + L + + P + G I + D R + ++ + +P Sbjct: 241 MPTLFAEVLSNAKKGDIIGPIRSGAGFHIIKVIDARGLQTKEVDEVRSRHILVKPSPILS 300 Query: 298 EKHEAEYVKKLRSN 311 E+ + K Sbjct: 301 EERAKAMLDKFVKQ 314 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 31/294 (10%), Positives = 81/294 (27%), Gaps = 27/294 (9%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI---TFDSNTVNYF 105 E IT G+I + ++Q E+ + +I E KQ + G +N + Sbjct: 136 EEITLGEIQRIQVQRRIQVSPQEISNLV--NMIEEQGLKQIEFQIGHILIEIPNNPTSEQ 193 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFK--------QYLAIQSIWPDVVKNDFMLKYG 157 + + + D + + + + + + + Sbjct: 194 LEKASNRANTVLDRVKDSGDFRRMAIAASAGPKALEGGIWDYMNINEMPTLFAEVLSNAK 253 Query: 158 NLEME-----------IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 ++ I + + + + P L + K + Sbjct: 254 KGDIIGPIRSGAGFHIIKVIDARGLQTKEVDEVRSRHILVKPSPILSEERAKAMLDKFVK 313 Query: 207 ESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQ 264 + R +++ G+ + S P F + N + P+ + Sbjct: 314 QIRAGDADFAALARQYSEDPGSGAKGGELGWADPSVYVPAFSQALNELKVNEISEPFRSS 373 Query: 265 KGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + + ++R + K + ++ ++R+ A I + Sbjct: 374 HGWHIVQLEERRTTDATDKFNTNKAHQLIFRRKFNEELQAWLDEMRAEAYIEVF 427 >gi|56694986|ref|YP_165332.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Ruegeria pomeroyi DSS-3] gi|56676723|gb|AAV93389.1| PPIC-type PPIASE domain protein [Ruegeria pomeroyi DSS-3] Length = 276 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 34/296 (11%), Positives = 82/296 (27%), Gaps = 44/296 (14%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + + V+ ++ A + + +NGE IT G + IA L + +L + + Sbjct: 4 LAFALVMALPVAAETKAEADTVVARVNGEEITLGHMI--IARASLPQQYQQLPDDVLFDG 61 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I++ L + + Sbjct: 62 ILDQL----------------------------VQQTLLKQQQKGETPKQIVLSLENEER 93 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + ++ + ++ + Q EY +L D Sbjct: 94 SLLAGETIEEIMAVATTETAIQAAYDAQYADGFGGEEYNASHILVPSEDEAKA------- 146 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 +E ++ ++ + G + + P+F+ + + ++ Sbjct: 147 ----VKELLDNGADFAATAKEKSTGPSGPNGGALGWFGAGAMVPEFEQAVVALNAGQVSD 202 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 P TQ G I + DKR E + + + + +L ++ I Sbjct: 203 PVQTQFGWHVIILNDKR--KSEAPALDEVRDELAGRIQQDAIEARLAELTKDSEIE 256 >gi|304410420|ref|ZP_07392038.1| SurA domain protein [Shewanella baltica OS183] gi|307304512|ref|ZP_07584262.1| SurA domain protein [Shewanella baltica BA175] gi|304350904|gb|EFM15304.1| SurA domain protein [Shewanella baltica OS183] gi|306911914|gb|EFN42338.1| SurA domain protein [Shewanella baltica BA175] Length = 434 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 104/317 (32%), Gaps = 19/317 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +K + + + + R+ IN ++ + +I+ I +K Sbjct: 1 MKPSKHLIFALFALAISQPTLAAPQPLDRVAVQINDGIVLESEITNMIDTVKANAKTANQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L ++ LI+ L+ Q ++ G+ ++ AR +S + Sbjct: 61 SLPSDSALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKMSVAQMQQKI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + +G+ + +++ L + ++ + + EI + + ++ +++ + Sbjct: 121 ESEGLSFSQYREQLREEITLGEIQRIQVQRRIQVSPQEITSLVKLIQEQGMKDVEYKIGH 180 Query: 185 FSIPDNKLQNQGFVQ---KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I ++ KR E +S + G Y+ ++ Sbjct: 181 ILIDVPNNPTSEQLESSSKRANIVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMNINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQ----NT 293 + F + + + P + G I I D R E ++ + + Sbjct: 241 MPTLFAEVINGAKTGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSPILS 300 Query: 294 PTKIEKHEAEYVKKLRS 310 + + +++K++RS Sbjct: 301 EDRAKAMLEQFLKQIRS 317 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 37/295 (12%), Positives = 84/295 (28%), Gaps = 29/295 (9%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI---TFDSNTVNYF 105 E IT G+I + ++Q E+ + LI E K K G +N + Sbjct: 136 EEITLGEIQRIQVQRRIQVSPQEITSLVK--LIQEQGMKDVEYKIGHILIDVPNNPTSEQ 193 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGD-------------NHFKQYLAIQSIWPDVVKNDF 152 ++ + E S D + + + +++ +V+ Sbjct: 194 LESSSKRANIVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMNINEMPTLFAEVINGAK 253 Query: 153 MLKYGNLEMEIPANKQKMKN-------ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + E R +L +++ Sbjct: 254 TGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSPILSEDRAKAMLEQFL- 312 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 ++ R K + +++ G+ + S P+F L + + P+ T Sbjct: 313 KQIRSGEAKFEDLARQYSEDPGSATKGGELGWAEPSIYVPEFAQTLNSLKTDQISEPFRT 372 Query: 264 QKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + ++R + K + ++ ++RS+A I + Sbjct: 373 THGWHITQLEERRKTDATDQFNSNRAHQLIFRRKFNEELQNWLDEMRSDAYIEIF 427 >gi|119944807|ref|YP_942487.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychromonas ingrahamii 37] gi|119863411|gb|ABM02888.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychromonas ingrahamii 37] Length = 439 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 41/317 (12%), Positives = 114/317 (35%), Gaps = 18/317 (5%) Query: 13 IKLLTTYFVLIIFCIVPIV-SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K++ + ++F + + +I +N E+I D+ + ++ + N + Sbjct: 1 MKVIKNILLPLLFASLAATQVFAEKIPLDKIEAVVNQEIILSSDLQRAQLDIQERYKNSD 60 Query: 72 --------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 L K + +LI + L+ Q ++ G+ + + Q A+ GL++E + Sbjct: 61 QTLPSGDKLTKQILDKLITDRLQLQIAQRIGLRINDAQLQQTVQQIAQKEGLTSEQLQAK 120 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 L+KQG F + + ++ + + + + ++ +++ + V Sbjct: 121 LEKQGKNYAAFVDTIRDELTINEIRQIEVRRRITISDQDVEQMVKRINAEGQKNTQFSFV 180 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLES 240 +K + Q+ K A++ ++ N + G + + Sbjct: 181 HLLFKLDKESSAAEQQRIEKKAQDLVKKIKLGANASQLALLNSEGPKASEGGDWGWRTIN 240 Query: 241 DLHPQFQ---NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP--- 294 ++ F N + ++ + P+ + G+ I I DK+ + ++ Sbjct: 241 EMPTLFAGIFNEQQTNKGDVIGPFKSDLGLHIIKIMDKKGAQNVMTVEVNARHILIKSNI 300 Query: 295 TKIEKHEAEYVKKLRSN 311 ++ + + R + Sbjct: 301 ILSDQKAQKLLTGYRQD 317 Score = 76.6 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 29/275 (10%), Positives = 78/275 (28%), Gaps = 9/275 (3%) Query: 51 ITDGDISKRIALLKLQKINGELEKIA-VQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 I+D D+ + + + + + + + E ++ + Sbjct: 155 ISDQDVEQMVKRINAEGQKNTQFSFVHLLFKLDKESSAAEQQRIEKKAQDLVKKIKLGAN 214 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME-----IP 164 A L + + G + + + + + + G + + I Sbjct: 215 ASQLALLNSEGPKASEGGDWGWRTINEMPTLFAGIFNEQQTNKGDVIGPFKSDLGLHIIK 274 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 +K + + + + L +Q + ++ +++ Sbjct: 275 IMDKKGAQNVMTVEVNARHILIKSNIILSDQKAQKLLTGYRQDIINGKKSFAALAREYSQ 334 Query: 225 KI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDL-GGE 281 V G + S P+F+ L + P+ T G + + +KR+ E Sbjct: 335 DPGSAVKGGDLGWADPSMYVPEFKELALSLPVGEISQPFRTMHGWHILEVINKRESDTTE 394 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A K + + ++ ++R A I Sbjct: 395 QATKQKAYSLLFQQRFPAEVYAWMNEIRQEAYIKI 429 >gi|332524713|ref|ZP_08400912.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rubrivivax benzoatilyticus JA2] gi|332108021|gb|EGJ09245.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rubrivivax benzoatilyticus JA2] Length = 436 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 93/289 (32%), Gaps = 15/289 (5%) Query: 38 MSSRIRTTINGEVITDGDISKRIALL-------KLQKINGELEKIAVQELIVETLKKQEI 90 I +N E +T ++ R+ + Q + K + +LI E Sbjct: 32 NGDYIVAIVNQEAVTAAEVESRVQRVLQAAARSGAQPSLEVVRKRVLDDLIEERAIVTYA 91 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 SGI + V+ A L+A+ L G+ F+ L Q + V + Sbjct: 92 RDSGIRVEDPEVDRAIQSVAAQNQLTADQLRERLRADGLDYARFRANLRDQILIERVRER 151 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREY--LIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + + E+ + T + I +L +P+ + +K + + Sbjct: 152 EVYQRIRVTDGEVDRYLAQQNIATQADVELNIAQILVIVPEGGDEQVLAARKARAEQALA 211 Query: 209 RLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQK 265 R+R +D + + + G + L F ++ P + Sbjct: 212 RVRGGEDFAAVAREISEDANQERGGVIGLRPSARLPDLFVEAVRDVPAGEVKPELVRSGA 271 Query: 266 GVEYIAICDKRD---LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 G + + ++++ + ++ + + + A+ + + R Sbjct: 272 GFHVLKVVERKETMAVRVTQTHARHILVRTSERVSPEMAAQRLAEFRRQ 320 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 48/141 (34%), Gaps = 3/141 (2%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYL 237 + ++ + +R+ + + + +++ S G + Sbjct: 291 QTHARHILVRTSERVSPEMAAQRLAEFRRQIVSGQRRFEDVARQYSEDGSAPSGGDLGWF 350 Query: 238 LESDLHPQFQNLLKKSQNN-TTNPYVTQKGVEYIAICDKRDLGGEI-ALKAYLSAQNTPT 295 + P+F+ + + + P ++ GV I + ++RD E ++ Sbjct: 351 APGTMVPEFEEAMNRLPIEGVSPPVRSRFGVHLIQVLERRDTAVEARQVREQARNVLRER 410 Query: 296 KIEKHEAEYVKKLRSNAIIHY 316 K + E+ K LR + I + Sbjct: 411 KFDDAYTEWAKDLRDRSYIEF 431 >gi|114048604|ref|YP_739154.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-7] gi|121956474|sp|Q0HS08|SURA_SHESR RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|113890046|gb|ABI44097.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-7] Length = 434 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 104/317 (32%), Gaps = 19/317 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +K + + + + R+ IN ++ + +I+ I +K Sbjct: 1 MKPSKHLIFALFALAISQPTMAAPQPIDRVAVQINDGIVLESEITNMIDTVKANARAANQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L ++ LI+ L+ Q ++ G+ ++ AR ++ + Sbjct: 61 SLPSDSALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKMTVAQMQQKI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + +G+ +++ L + ++ + + EI + ++ +++ + Sbjct: 121 ESEGLSFGQYREQLREEITLGEIQRIQVQRRIQVSPQEITGLVKLIQEQGMKDVEYQIGH 180 Query: 185 FSIPDNKLQNQGFVQ---KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I N ++ KR E +S + G Y+ ++ Sbjct: 181 ILIDVPNNPNSEQLEASSKRANAVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMNINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQ----NT 293 + F + + + + P + G I I D R E ++ + + Sbjct: 241 MPTLFAEVINGAKKGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSPILS 300 Query: 294 PTKIEKHEAEYVKKLRS 310 + + +++K++RS Sbjct: 301 EDRAKAMLEQFLKQIRS 317 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 84/295 (28%), Gaps = 29/295 (9%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI---TFDSNTVNYF 105 E IT G+I + ++Q E+ + LI E K + G +N + Sbjct: 136 EEITLGEIQRIQVQRRIQVSPQEITGLVK--LIQEQGMKDVEYQIGHILIDVPNNPNSEQ 193 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGD-------------NHFKQYLAIQSIWPDVVKNDF 152 ++ E S D + + + +++ +V+ Sbjct: 194 LEASSKRANAVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMNINEMPTLFAEVINGAK 253 Query: 153 MLKYGNLEMEIPANKQKMKN-------ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + E R +L +++ Sbjct: 254 KGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSPILSEDRAKAMLEQFL- 312 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 ++ R K + +++ G+ + S P+F L S + + P+ T Sbjct: 313 KQIRSGEAKFEDLARQYSEDPGSATKGGELGWAEPSIYVPEFAQTLNSLSPDQISEPFRT 372 Query: 264 QKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + ++R + K + ++ ++R++A I + Sbjct: 373 THGWHITQLEERRKTDATDQFNTNRAHQLIFRRKFNEELQNWLDEMRADAYIEVF 427 >gi|197105171|ref|YP_002130548.1| peptidyl-prolyl cis-trans isomerase family protein [Phenylobacterium zucineum HLK1] gi|196478591|gb|ACG78119.1| peptidyl-prolyl cis-trans isomerase family protein [Phenylobacterium zucineum HLK1] Length = 468 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 110/290 (37%), Gaps = 16/290 (5%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALL-------KLQKINGELEKIAVQELIVETLKKQE 89 +S + +N E+I+ D+++R+ LL ++ + ++ A+ L+ E L+ QE Sbjct: 74 GISESVAAVVNDEIISTYDLAQRMRLLIATSGVQPTEQTLPQFQREALVSLVDERLQFQE 133 Query: 90 ------IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 +K I V+ AR ++ E F SFL +GIG + +Q + Q Sbjct: 134 LRRVEREQKIDIVATDEEVDEEIADMARQNNMTREQFLSFLGARGIGVDTLRQQIRAQVS 193 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 W ++ + + + +I A + +++ + + I +++ + + Sbjct: 194 WARWIRGRYGSRLRIGDDQIAATQARLEAAAAK-PQYQISEVLIDASRVGGMQQAMQGAQ 252 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYV 262 + +F++ + G A ++ + ++ + + + + + P Sbjct: 253 QLVAQMQQGAPFPAVARQFSALPTAAAGGDAGWISQGEMPTEVEQVLEQMRPGQLSQPIP 312 Query: 263 TQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + GV + + DKR G + + E ++ LR Sbjct: 313 VRDGVYIVYLRDKRAGGGATLVNLKQAAVPLAQGADEAEARAKLEALRPK 362 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 2/124 (1%) Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 + E R ++ E+ A+ + V G +DL P F+ + Sbjct: 344 AQGADEAEARAKLEALRPKITSCETL-EQAAAGVEGVVAGDLGEAEVADLAPAFRQAAET 402 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + P T G+ +A+C +R G + + + ++ Y++ LR++ Sbjct: 403 LQIGQVSEPIRTNAGLHLVAVCGRRAAGEAQVDREQIENRLYGQQLSMIARRYMRDLRNS 462 Query: 312 AIIH 315 A I Sbjct: 463 ATIE 466 >gi|86136812|ref|ZP_01055390.1| PPIC-type PPIASE domain protein [Roseobacter sp. MED193] gi|85826136|gb|EAQ46333.1| PPIC-type PPIASE domain protein [Roseobacter sp. MED193] Length = 283 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 33/298 (11%), Positives = 76/298 (25%), Gaps = 50/298 (16%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKIAVQ 78 + + + + ++ + T+NGE IT G + L Q L + Sbjct: 12 ALAVFMALPLPALAAPHANTVIATVNGEEITLGHMIMARDSLPDQYKQLPDDVLYNAILD 71 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 +L+ +T KQE+ + Sbjct: 72 QLVQQTALKQELH---------------------------------GGVPHYVKLAVENE 98 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + +V++ + + E+ +L Sbjct: 99 MRALLAANVIETVMKSASDEEAVRQAYEDKYSDGDGGDEFNAAHIL-----------VET 147 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNT 257 Q+ + + ++ ++ + G + + P+F+ + Sbjct: 148 QEDALEIKSELDTGADFSIMAKERSTGPSGPNGGDLGWFTRGRMVPEFEAAVLDLRAGEI 207 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P TQ G I + ++R + + V L + AII Sbjct: 208 SAPVETQFGWHLILLKERRKTAA--PAFEEVRETLSQELQNAAVEARVSDLTAAAIIE 263 >gi|152999582|ref|YP_001365263.1| SurA domain-containing protein [Shewanella baltica OS185] gi|160874201|ref|YP_001553517.1| SurA domain-containing protein [Shewanella baltica OS195] gi|217974467|ref|YP_002359218.1| SurA domain-containing protein [Shewanella baltica OS223] gi|151364200|gb|ABS07200.1| SurA domain protein [Shewanella baltica OS185] gi|160859723|gb|ABX48257.1| SurA domain [Shewanella baltica OS195] gi|217499602|gb|ACK47795.1| SurA domain protein [Shewanella baltica OS223] gi|315266433|gb|ADT93286.1| SurA domain [Shewanella baltica OS678] Length = 434 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 104/317 (32%), Gaps = 19/317 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +K + + + + R+ IN ++ + +I+ I +K Sbjct: 1 MKPSKHLIFALFALAISQPTLAAPQPLDRVAVQINDGIVLESEITNMIDTVKANAKTANQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L ++ LI+ L+ Q ++ G+ ++ AR +S + Sbjct: 61 SLPSDSALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKMSVAQMQQKI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + +G+ + +++ L + ++ + + EI + + ++ +++ + Sbjct: 121 ESEGLSFSQYREQLREEITLGEIQRIQVQRRIQVSPQEITSLVKLIQEQGMKDVEYQIGH 180 Query: 185 FSIPDNKLQNQGFVQ---KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I ++ KR E +S + G Y+ ++ Sbjct: 181 ILIDVPNNPTSEQLESSSKRANIVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMNINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQ----NT 293 + F + + + P + G I I D R E ++ + + Sbjct: 241 MPTLFAEVINGAKTGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSPILS 300 Query: 294 PTKIEKHEAEYVKKLRS 310 + + +++K++RS Sbjct: 301 EDRAKAMLEQFLKQIRS 317 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 84/295 (28%), Gaps = 29/295 (9%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI---TFDSNTVNYF 105 E IT G+I + ++Q E+ + LI E K + G +N + Sbjct: 136 EEITLGEIQRIQVQRRIQVSPQEITSLVK--LIQEQGMKDVEYQIGHILIDVPNNPTSEQ 193 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGD-------------NHFKQYLAIQSIWPDVVKNDF 152 ++ + E S D + + + +++ +V+ Sbjct: 194 LESSSKRANIVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMNINEMPTLFAEVINGAK 253 Query: 153 MLKYGNLEMEIPANKQKMKN-------ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + E R +L +++ Sbjct: 254 TGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSPILSEDRAKAMLEQFL- 312 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 ++ R K + +++ G+ + S P+F L + + P+ T Sbjct: 313 KQIRSGEAKFEDLARQYSEDPGSATKGGELGWAEPSIYVPEFAQTLNSLKTDQISEPFRT 372 Query: 264 QKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + ++R + K + ++ ++RS+A I + Sbjct: 373 THGWHITQLEERRKTDATDQFNSNRAHQLIFRRKFNEELQNWLDEMRSDAYIEIF 427 >gi|124004175|ref|ZP_01689021.1| chaperone SurA, putative [Microscilla marina ATCC 23134] gi|123990245|gb|EAY29744.1| chaperone SurA, putative [Microscilla marina ATCC 23134] Length = 460 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 35/290 (12%), Positives = 89/290 (30%), Gaps = 15/290 (5%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIV-SYKSWAMSSRIRTTINGEVITDGDISKR 59 M + L F + + + + + + +I +N +I + D+ +R Sbjct: 1 MQQNIMQKL-IFKSYIKVLLLCLAIGFSSMSMAQGGGQLVDKIIAKVNNNIILESDLQQR 59 Query: 60 IALLKLQKI----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 + Q +L+ ++E+I++ L + E + VN + Sbjct: 60 YLEIISQSQTTAPEKDLKCKILEEMIIQKLLVAKAEIDSVIVSDIEVNLQLDRRIDYMLK 119 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV----VKNDFMLKYGNLEMEIPANKQKMK 171 S L+K + + + + + E+ + Sbjct: 120 SVGGEKQQLEKLYGKTMDQIKEDIRDILKEQMTVSKMNGEITSTVKITPKEVRQYFDSIP 179 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR---LRLPKDCNKLEKFASKI-H 227 ++ + + I + QK + E+ R ++ ++F+ Sbjct: 180 KDSLPYFSDEVEVGHIVKIPEPTKEQKQKIRQKLEKIRGRLMKGEDFAQLAQEFSQDYVS 239 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276 G + P+F+ + + +N + TQ G I + ++R Sbjct: 240 AKQGGNLGWQTRGVFVPKFEAAVFRLKKNEISKVIETQLGFHVIQLLERR 289 >gi|148261232|ref|YP_001235359.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidiphilium cryptum JF-5] gi|146402913|gb|ABQ31440.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidiphilium cryptum JF-5] Length = 311 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 78/285 (27%), Gaps = 48/285 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI---AVQELIVETLKKQEIEKSG 94 + ++G I D++K L Q N +++ + L+ E + K+G Sbjct: 52 QKDTVVAIVDGHDIHLSDVAKAAQDLPPQLQNAPPQELFPVLLNRLVDERALLVKARKAG 111 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 D + A Q++ ++ Sbjct: 112 TAKDPKVAAE------------------------------MKAAADQALERAYLRALVEP 141 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 K + ++ + +K E R +L Q+ + + K Sbjct: 142 KLTDAAVKAYYDAHYVKAKQPEEVKARQIL-----------VKTQQEAEKIIAQLGKGAK 190 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAI 272 +K++ + G+ + + ++ F + T P +Q G I Sbjct: 191 FSALAKKYSIDPGAKNGGELGWFTKDEMVKPFADAAFALKPGTYTKTPVHSQFGWHVIES 250 Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 KR+ A + Q K ++ R I + Sbjct: 251 QGKREKPV--PPLADVKDQIRQQITNKAVTAALEDARKGLDIKLF 293 >gi|220935188|ref|YP_002514087.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thioalkalivibrio sp. HL-EbGR7] gi|219996498|gb|ACL73100.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thioalkalivibrio sp. HL-EbGR7] Length = 270 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 81/304 (26%), Gaps = 47/304 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL-E 73 L+T + + +S +NG I++ D + L ++ + L Sbjct: 9 LVTGLLTVTLITGCGRGEAPQAEISGEAVAMVNGVAISEADFQDFLNLQRMTRPGENLLP 68 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + E+I L +Q + G+ D + Sbjct: 69 DEVLDEMINMELLRQAALQQGLDRDPDIQRQV---------------------------- 100 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + ++ Y ++ ++Q +L Sbjct: 101 --ERARTNLMVGALIDQRLNQDYTEEQLRAEYDRQIQAIDRTEYKARHILL--------- 149 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252 + ++ + + ++ G + + P F + + Sbjct: 150 ---DSEADAREVIAALEAGGDFQELAREHSTGPSGPMGGDLGWFTADAMVPAFSEAVQAM 206 Query: 253 SQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + + P T+ G I + D R E + + + +Y+ LR+ Sbjct: 207 EKGSYSNEPVQTEFGWHVILLEDTR--RSEPPPFEAVRDRVAQILDNRALQDYIGDLRTA 264 Query: 312 AIIH 315 A I Sbjct: 265 AKIE 268 >gi|239832961|ref|ZP_04681290.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ochrobactrum intermedium LMG 3301] gi|239825228|gb|EEQ96796.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ochrobactrum intermedium LMG 3301] Length = 456 Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 88/293 (30%), Gaps = 48/293 (16%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETL 85 P + +++ T+NG+ IT G++ + L Q + A+ LI Sbjct: 175 PAAAPAEKEDPTKVLATVNGKDITVGEVDQAAGDLDPQFSRLPAEQRRLAALAALIDIKA 234 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 E EK + + ++L +++ Sbjct: 235 MAGEAEKEKLDQSKEFKDR------------------------------MEFLRERALHN 264 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + K+ + K + ++ +K+ E R +L + Sbjct: 265 EYFKDAVVDKISDDDVRARYDKEIAAMPPQVEVRARHILVKTKEEAEA-----------I 313 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVT 263 + K + ++ ++ + G Y E + P+F+ T P + Sbjct: 314 IKKLAGGAKFEDLAKESSTDGTASNGGDLGYFTEGQMVPEFEKAAFALKPGEYTKEPVQS 373 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 Q G I + D+R + Q + + E VKKLR I Y Sbjct: 374 QFGFHVIQLEDRRTKQP--PAFDQVKDQIRSIIMRERYVETVKKLRDGMKIDY 424 >gi|298292757|ref|YP_003694696.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Starkeya novella DSM 506] gi|296929268|gb|ADH90077.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Starkeya novella DSM 506] Length = 337 Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 84/278 (30%), Gaps = 30/278 (10%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 + T+NG IT GD++ A L Q + +L+ A E ++ L D Sbjct: 64 DTVLATVNGAAITRGDVNAAAAEL-AQNLPPQLQGPARDEYVLGFLIDLTAMAQAAEAD- 121 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 Q ++ + + ++ + Sbjct: 122 ------------------------KLDQTPAFKQQLDFIRKRVLMQAALEKATKAALTDD 157 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 M+ + + E R +LF + + +K+ +D E + Sbjct: 158 AMKKTYEEAVKQQKPEEEVHARHILFRASPDDKEASAAAEKKAQDVEARLKKGEDFATLA 217 Query: 220 EKFASKIHDVS-IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 ++ G + + + P+F + + P TQ G I + +KR+ Sbjct: 218 KQLTEDPSGKQDGGDLGFFAKEQMVPEFAEVAFAMKPGEVSKPVKTQFGWHVIKVEEKRE 277 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + Q +K +AE V+K R A + Sbjct: 278 KP--TPTFDEVKPQIEQFLAQKAQAEAVQKTREAAKVE 313 >gi|117921645|ref|YP_870837.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. ANA-3] gi|117613977|gb|ABK49431.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. ANA-3] Length = 434 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 37/317 (11%), Positives = 105/317 (33%), Gaps = 19/317 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +K + + + + R+ IN ++ + +I+ I +K Sbjct: 1 MKPSKHLIFALFALAISQPTMAAPQPIDRVAVQINDGIVLESEITNMIDTVKANARAANQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L ++ LI+ L+ Q ++ G+ ++ AR ++ + Sbjct: 61 SLPSDSALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKMTVAQMQQKI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + +G+ + +++ L + ++ + + EI + ++ +++ + Sbjct: 121 ESEGLSFSQYREQLREEITLGEIQRIQVQRRIQVSPQEITGLVKLIQEQGMKDVEYQIGH 180 Query: 185 FSIPDNKLQNQGFVQ---KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I + ++ KR E +S + G Y+ ++ Sbjct: 181 ILIDVPNNPSSEQLEASSKRANAVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMNINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQ----NT 293 + F + + + + P + G I I D R E ++ + + Sbjct: 241 MPTLFAEVINGAKKGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSPILS 300 Query: 294 PTKIEKHEAEYVKKLRS 310 + + +++K++RS Sbjct: 301 EDRAKAMLEQFLKQIRS 317 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 84/295 (28%), Gaps = 29/295 (9%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI---TFDSNTVNYF 105 E IT G+I + ++Q E+ + LI E K + G +N + Sbjct: 136 EEITLGEIQRIQVQRRIQVSPQEITGLVK--LIQEQGMKDVEYQIGHILIDVPNNPSSEQ 193 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGD-------------NHFKQYLAIQSIWPDVVKNDF 152 ++ E S D + + + +++ +V+ Sbjct: 194 LEASSKRANAVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMNINEMPTLFAEVINGAK 253 Query: 153 MLKYGNLEMEIPANKQKMKN-------ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + E R +L +++ Sbjct: 254 KGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSPILSEDRAKAMLEQFL- 312 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 ++ R K + +++ G+ + S P+F L S + + P+ T Sbjct: 313 KQIRSGEAKFEDLARQYSEDPGSATKGGELGWAEPSIYVPEFAQTLNSLSPDQISEPFRT 372 Query: 264 QKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + ++R + K + ++ ++R++A I + Sbjct: 373 THGWHITQLEERRKTDATDQFNTNRAHQLIFRRKFNEELQNWLDEMRADAYIEVF 427 >gi|206603473|gb|EDZ39953.1| Putative peptidyl-prolyl cis-trans isomerase [Leptospirillum sp. Group II '5-way CG'] Length = 340 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 109/331 (32%), Gaps = 19/331 (5%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI---- 60 ++ F + + +L+ F + + ++ +N +IT ++ + + Sbjct: 1 MYFRNVLFPAIFLSATLLLSFLQAG-TARGERVLVDQVMAVVNHHMITKSELDRSLAPTF 59 Query: 61 ALLKLQKINGELEKIA-------VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 L + ++ + + I E L+ +E E+ G+T + +++ + Sbjct: 60 KKLHKRFRGKAYRELVASLEYKLLMKKINERLELEEAERQGLTVTDDELDHAIESIMQKN 119 Query: 114 GLSAE-DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK--QKM 170 +++ + L +QG+ +KQ L Q +V + E+ + Sbjct: 120 NFTSKWQLKTALSEQGMSYRRYKQQLRKQMTILKLVNQEVRSTVVISPDEVRQYYLAHRD 179 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE-ESRLRLPKDCNKLEKFASKIHDV 229 K +R + IP+ + Q ++ + R + + Sbjct: 180 KYRLPPHVTLRDIFLRIPEGATEAQIQEIRKHGEHILRQLKRGDDFVILAGSESEGPNAE 239 Query: 230 SIGKAQYLLESD-LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKA 286 + G L + L Q T+ T G I I + D LK+ Sbjct: 240 NGGALGDLTKDQLLPELVQPAFTIPPGQTSGLIQTSNGFYIIKIIKREDNSFRSFKELKS 299 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + T +K +++KLR + + Y Sbjct: 300 QILNDLTKKTTDKRLRIWLEKLREKSYVVIY 330 >gi|170725378|ref|YP_001759404.1| SurA domain-containing protein [Shewanella woodyi ATCC 51908] gi|169810725|gb|ACA85309.1| SurA domain [Shewanella woodyi ATCC 51908] Length = 434 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 102/314 (32%), Gaps = 15/314 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK----- 67 +K + A R+ IN ++ + +I+ I +K Sbjct: 1 MKPCKHLIFAFLALAASHTVQAQTAPLDRVSVQINEGILLESEITGMIKTVKANATAAGQ 60 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + L ++ LI+ L+ Q ++ G+ ++ A+ L+ + + Sbjct: 61 ALPSDSALRTQVIERLIMTRLQMQMADRIGLHIGDLQLDQTIGNIAKEQNLTVDQMQLKI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ N +++ L + ++ + + EI + + ++ ++E + Sbjct: 121 AEEGMSWNQYREQLREEITLGEIQRIQVQRRIQVSPQEINSLVKMIEEKGLQEVEFQIGH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESD 241 I N + K AE R+ + +S + G Y+ ++ Sbjct: 181 ILIEVPSSPNSEQLASASKRAETVLKRVKDGADFRRTAIAASSGPKALEGGVWDYMNVNE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297 + F + L + P + G I + D R + ++ + +P Sbjct: 241 MPTLFAEVLGNAKPGDVIGPIRSGAGFHIIKVLDARGLQTKEIDEVRSRHILIKPSPILS 300 Query: 298 EKHEAEYVKKLRSN 311 E+ + K Sbjct: 301 EERAKAMLDKFVKE 314 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 36/294 (12%), Positives = 79/294 (26%), Gaps = 27/294 (9%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI------------- 95 E IT G+I + ++Q E+ + +I E ++ + G Sbjct: 136 EEITLGEIQRIQVQRRIQVSPQEINSLVK--MIEEKGLQEVEFQIGHILIEVPSSPNSEQ 193 Query: 96 ----TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 + + TV A + S +G ++ + Sbjct: 194 LASASKRAETVLKRVKDGADFRRTAIAASSGPKALEGGVWDYMNVNEMPTLFAEVLGNAK 253 Query: 152 FMLKYGNLEM-----EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 G + I + + + + P L + K + Sbjct: 254 PGDVIGPIRSGAGFHIIKVLDARGLQTKEIDEVRSRHILIKPSPILSEERAKAMLDKFVK 313 Query: 207 ESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 E R +++ G+ + S P F L N + P+ + Sbjct: 314 EIRTGDADFAALARQYSEDPGSGAKGGELGWADPSVYVPAFAQTLNALELNEISEPFRSS 373 Query: 265 KGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + + ++R + K + ++ ++RS A I + Sbjct: 374 HGWHIVQLEERRKTDATDKFNTNRAHQLIFRRKFNEELQNWLDEMRSEAYIEVF 427 >gi|87198910|ref|YP_496167.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Novosphingobium aromaticivorans DSM 12444] gi|87134591|gb|ABD25333.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Novosphingobium aromaticivorans DSM 12444] Length = 456 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 95/275 (34%), Gaps = 11/275 (4%) Query: 44 TTINGEVITDGDISKRIALLKLQK-------INGELEKIAVQELIVETLKKQEIEKSGIT 96 +NGE+IT D+ +R+AL+ L ++ LI ETL+ QE + + + Sbjct: 67 AIVNGEIITGTDVEQRLALIVSANGGKIDGEEKERLRMQVLRNLIDETLQIQEAKAADVP 126 Query: 97 FDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 D V+ + + A G SA+ +L + G K+ + + W ++++ + Sbjct: 127 ADDGQVDASYERVATQNFGQSADALEKYLARIGSSAASLKRQIRGEIAWQNLLRRNVQPF 186 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 E E+ Q+++ E +F + + Q F E + Sbjct: 187 VNVSEGEVQEAMQRLQASKGTEEYRIGEIFLAATEENKPQVFANAE--KIVEQLKQGGSF 244 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICD 274 +++ G ++ + L + P + G + + D Sbjct: 245 VAYARQYSEASTAAVGGDLGWIRLAQLPTELATTAASMGPGQLAGPVEIRGGFSILYLID 304 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 KR + A LS + + K + R Sbjct: 305 KRQVLTADPRDALLSLKQISIEFPKGATNEIATKR 339 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 3/83 (3%) Query: 237 LLESDLHPQFQNLLKKSQ-NNTTNPYVT-QKGVEYIAICDKRDLGGEI-ALKAYLSAQNT 293 + DL Q L TT P+ + ++GV + +C + D + AQ Sbjct: 373 IKARDLPGALQETLLNLPIGQTTPPFGSIEEGVRVLMLCGRDDPQVNSGPSFDEMMAQIE 432 Query: 294 PTKIEKHEAEYVKKLRSNAIIHY 316 ++ K Y++ LR +A+I Y Sbjct: 433 DDRVNKRAQTYLRDLRRDAVIEY 455 >gi|193211689|ref|YP_001997642.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobaculum parvum NCIB 8327] gi|193085166|gb|ACF10442.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobaculum parvum NCIB 8327] Length = 439 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 33/277 (11%), Positives = 90/277 (32%), Gaps = 11/277 (3%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71 K + +F ++I + + + + +I + E+I I+++ + LQ + Sbjct: 3 KTVFAFFAVLIVALAGLSDAIASSAPDKIVAIVGREIILKSQINEQELMYHLQYRESKND 62 Query: 72 --LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 L + ++ +I + + + I+ + ++ S+ ++ + Sbjct: 63 PGLRQKILKNMIDQKILLTKARIDSISVNEQGIDEMANAKYNALRSQFPSVSAMEERFSL 122 Query: 130 GDNHFKQYLAIQSIWPDVV---KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 N KQ + +V + E+ A K +N + + +V Sbjct: 123 PVNRLKQDIRDDIRNQQMVDALRRKHFHDVTVSYDEVMAFYGKERNNLPKVPEMVSVSQL 182 Query: 187 IPDNKLQNQGFVQK--RIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLH 243 I ++ + + +I+ + + + G ++ + +L Sbjct: 183 IRYPEIADSEKQRAMSKIQAISQQLQNGADFATLARETSDDPGSRELGGDLGFVHKGELV 242 Query: 244 PQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG 279 P F+ + ++ G I + DK D Sbjct: 243 PSFEEAAYALKPGQISGVVESRFGYHLIQLIDKEDQS 279 Score = 43.5 bits (100), Expect = 0.043, Method: Composition-based stats. Identities = 18/167 (10%), Positives = 50/167 (29%), Gaps = 17/167 (10%) Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + ++ + + +R +L + NK V+ + EK++ Sbjct: 267 YHLIQLIDKEDQSIHVRHILAAFDRNKTDLPKTVRMLEAIRADILAGKASFAEMAEKYSE 326 Query: 225 KI-HDVSIGKA-------QYLLESDLHPQFQNLLK--KSQNNTTNPYVT-----QKGVEY 269 + G+ +L+ L P Q ++ K + + P Sbjct: 327 DPASKGTGGQVISSATGEPFLVFDSLRPDLQKIVGGLKHAGDISQPVKIEPERGPFFYAL 386 Query: 270 IAICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + ++ + L K ++ +++KL+ ++ Sbjct: 387 FRLDERLPAHQLSPERDFTRLEEMAANQKRQEQFEAWIEKLKKEVVV 433 >gi|157374105|ref|YP_001472705.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sediminis HAW-EB3] gi|157316479|gb|ABV35577.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sediminis HAW-EB3] Length = 434 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 36/310 (11%), Positives = 105/310 (33%), Gaps = 15/310 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +K + + + R+ IN ++ + +I+ + +K + E Sbjct: 1 MKPCKHFIFAFLTLAMSHTVLAKVEPLDRVAVQINEGIVLESEIAGMLQTVKANASSAEQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L ++ LI+ L+ Q ++ G+ ++ A+ L+ + + + Sbjct: 61 ALPSDQALRTQVIERLIMTRLQMQMADRIGLHIGDLQLDQTISNIAKEQNLTVDQMRAKI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++G+ + +++ L + ++ + + EI + ++ +++ + Sbjct: 121 GEEGMSWSQYREQLREEITLGEIQRIQVQRRIQVSPQEINNLVKLIEEQGLQQVEFQIGH 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESD 241 I + +QK + A R+ + ++ + G Y+ ++ Sbjct: 181 ILIEVPSSPSSEALQKASERANTVLKRIQDGDDFRRTAIAASAGPKALEGGVWDYMNVNE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297 + F + L + P + G I + D R + ++ + +P Sbjct: 241 MPTLFAEVLSGAKTGDVIGPIRSGAGFHIIKVLDARGLQTKEVDEVSSRHILIKPSPILS 300 Query: 298 EKHEAEYVKK 307 E+ + K Sbjct: 301 EERAKAMLDK 310 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 36/294 (12%), Positives = 76/294 (25%), Gaps = 27/294 (9%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS--------- 99 E IT G+I + ++Q E+ + LI E +Q + G Sbjct: 136 EEITLGEIQRIQVQRRIQVSPQEINNLVK--LIEEQGLQQVEFQIGHILIEVPSSPSSEA 193 Query: 100 --------NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 NTV + + +G ++ + Sbjct: 194 LQKASERANTVLKRIQDGDDFRRTAIAASAGPKALEGGVWDYMNVNEMPTLFAEVLSGAK 253 Query: 152 FMLKYGNLEM-----EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 G + I + + + + P L + K E Sbjct: 254 TGDVIGPIRSGAGFHIIKVLDARGLQTKEVDEVSSRHILIKPSPILSEERAKAMLDKFVE 313 Query: 207 ESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 + R +++ G+ + S P F L + P+ + Sbjct: 314 QVRAGDADFAALARQYSEDPGSGAKGGELGWADPSVYVPAFAQTLNALEIGEISEPFRSS 373 Query: 265 KGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + + ++R + K + ++ ++RS A I + Sbjct: 374 HGWHIVQLEERRKTDATDKFNTNRAHQLIFRRKFNEELQNWLDEMRSEAYIEVF 427 >gi|110598304|ref|ZP_01386579.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium ferrooxidans DSM 13031] gi|110340112|gb|EAT58612.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium ferrooxidans DSM 13031] Length = 438 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 32/277 (11%), Positives = 81/277 (29%), Gaps = 12/277 (4%) Query: 13 IKLLT-TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K ++ +L + + I + ++ RI + EVI +I R + +LQ Sbjct: 1 MKKISGKAVLLFLAGLASITTPSYAEVADRIVAVVGREVILKSEIDSRALMARLQSPELA 60 Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L + + LI + + + + + D N ++ + + Sbjct: 61 KDTGLSRRILDGLIEQQIILSKAKIDSVKVDENAISATAGDRFKQLRARFASKEEMETRF 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVK---NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 G + + + ++++ E+ + V Sbjct: 121 GKTLPAIRDEIRTEIRNQELIQTLRRKRSAGVKVTSGEVMDYYNANREKFSLIPEGVKVS 180 Query: 185 FSIPDNKLQNQGFVQK--RIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD 241 + + +Q +I+ + K++ G Y+ + Sbjct: 181 QIMKYPAVSADAQLQALTKIQAVRKELQGGADFALLARKYSQDPGSARLGGDLGYVQKGA 240 Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277 L P F+ + + T+ G I + +K Sbjct: 241 LIPSFETAAFSLKEGEVSGIIETRYGYHIIQLLNKEP 277 Score = 44.7 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 53/167 (31%), Gaps = 17/167 (10%) Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + ++ N +R +L + +K G Q + K++ Sbjct: 267 YHIIQLLNKEPNAIHVRHILVAFDHSKDDFSGVDQLLNSIRADILSGKSSFSEMASKYSD 326 Query: 225 KIHDVSIG----KAQ----YLLESDLHPQFQNLLK--KSQNNTTNP--YVTQKG---VEY 269 +G Y+ L P+ + ++ K+ + + P +G Sbjct: 327 DPSTAKLGGVISSIGGVGEYISLPSLRPELRAIITALKNPGDISPPSKIDPPQGESFYTI 386 Query: 270 IAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKLRSNAII 314 I + ++ K Y L + K + +E+V++LR + Sbjct: 387 IKLNERVAAHTVNPEKDYSFLEEEALDNKNRRLFSEWVQQLRKEVYV 433 >gi|39933588|ref|NP_945864.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris CGA009] gi|39647434|emb|CAE25955.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris CGA009] Length = 311 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 81/280 (28%), Gaps = 47/280 (16%) Query: 40 SRIRTTINGEVITDGDIS---KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 + + +NG I D+ + + Q ++ + LI + + E I Sbjct: 41 NPVLAKVNGAEIRQSDVDLAEQELGPSLAQLDPASRKENVLAFLIDMKIVAKAAEDKKIQ 100 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 +++ + + + DV+ + Sbjct: 101 DNADFKKRL------------------------------DFARNRLLMDDVLAAEGKAAT 130 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + M+ ++ + +E R +L D ++K Sbjct: 131 TDEAMKKVYDEAAKQISGEQEVHARHILVETEDEAKAVAEELKK-----------GADFA 179 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 +K + G + + + P+F ++P TQ G I + +K Sbjct: 180 ELAKKKSKDPGASDGGDLGFFTKDQMVPEFSAAAFALEPGKISDPIKTQFGWHIIKVEEK 239 Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 R+ + AQ K +++YV KLR A I Sbjct: 240 RNRKP--PSFDQVKAQIEQYVTRKAQSDYVSKLRQAAKIE 277 >gi|126173223|ref|YP_001049372.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS155] gi|125996428|gb|ABN60503.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS155] Length = 434 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 104/317 (32%), Gaps = 19/317 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +K + + + + R+ IN ++ + +I+ I +K Sbjct: 1 MKPSKHLIFALFALAISQPTLAAPQPLDRVAVQINDGIVLESEITNMIDTVKANAKTANQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L ++ LI+ L+ Q ++ G+ ++ AR +S + Sbjct: 61 SLPSDSALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKISVAQMQQKI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + +G+ + +++ L + ++ + + EI + + ++ +++ + Sbjct: 121 ESEGLSFSQYREQLREEITLGEIQRIQVQRRIQVSPQEITSLVKLIQEQGMKDVEYQIGH 180 Query: 185 FSIPDNKLQNQGFVQ---KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I ++ KR E +S + G Y+ ++ Sbjct: 181 ILIDVPNNPTSEQLESSSKRANIVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMNINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQ----NT 293 + F + + + P + G I I D R E ++ + + Sbjct: 241 MPTLFAEVINGAKTGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSPILS 300 Query: 294 PTKIEKHEAEYVKKLRS 310 + + +++K++RS Sbjct: 301 EDRAKAMLEQFLKQIRS 317 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 84/295 (28%), Gaps = 29/295 (9%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI---TFDSNTVNYF 105 E IT G+I + ++Q E+ + LI E K + G +N + Sbjct: 136 EEITLGEIQRIQVQRRIQVSPQEITSLVK--LIQEQGMKDVEYQIGHILIDVPNNPTSEQ 193 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGD-------------NHFKQYLAIQSIWPDVVKNDF 152 ++ + E S D + + + +++ +V+ Sbjct: 194 LESSSKRANIVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMNINEMPTLFAEVINGAK 253 Query: 153 MLKYGNLEMEIPANKQKMKN-------ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + E R +L +++ Sbjct: 254 TGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSPILSEDRAKAMLEQFL- 312 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 ++ R K + +++ G+ + S P+F L + + P+ T Sbjct: 313 KQIRSGEAKFEDLARQYSEDPGSATKGGELGWAEPSIYVPEFAQTLNSLKTDQISEPFRT 372 Query: 264 QKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + ++R + K + ++ ++RS+A I + Sbjct: 373 THGWHITQLEERRKTDATDQFNSNRAHQLIFRRKFNEELQNWLDEMRSDAYIEIF 427 >gi|193214030|ref|YP_001995229.1| SurA domain [Chloroherpeton thalassium ATCC 35110] gi|193087507|gb|ACF12782.1| SurA domain [Chloroherpeton thalassium ATCC 35110] Length = 439 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 95/316 (30%), Gaps = 19/316 (6%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS----SRIRTTINGEVITDGDISKRIALLKLQK 67 I L ++F + S+ A + I + E I D+ + L Q Sbjct: 1 MINKLGKIGFALLFMLALAGSFSKPASAQEMLDGIVAVVGDEAILKSDVDNQAMLYAYQN 60 Query: 68 I----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 L K LI + + + + IT S V+ Q + Sbjct: 61 QINLNTPGLWKEVFTALINQKILLMKAKLDSITVSSEEVDGLVEQRIAFLRERLRTDEAI 120 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFML-----KYGNLEMEIPANKQKMKNITVREY 178 ++ G + + L + +V+ N E+ N + + Sbjct: 121 VETFGKSIDMLRVDLREEIKSQRLVEELQRQHFSDLTVSNEEVVDFYNTYRDSLPEIPAE 180 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 + + P ++ I++ ++ + G ++ Sbjct: 181 VEVAHIVIKPKTDSLSKQSALDAIQEVQKELQDGKDFAELARAESQDPGSARLGGDLGFV 240 Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 + +F+ + +N + T+ G I + +++ GE ++ + TK Sbjct: 241 KRGEFVRRFEEVAFGLKENQISGIVETEFGYHIIQLLERK---GEAIRVRHILKRFDKTK 297 Query: 297 IEKHEA-EYVKKLRSN 311 + A + + ++R N Sbjct: 298 LNDAAAIDQLNEIREN 313 Score = 41.6 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 17/169 (10%), Positives = 42/169 (24%), Gaps = 15/169 (8%) Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 E E + ++ +R +L KL + + + + E + Sbjct: 266 ETEFGYHIIQLLERKGEAIRVRHILKRFDKTKLNDAAAIDQLNEIRENVLSGKAEFSMMA 325 Query: 220 EKFASKIHDVS-IGKAQYLLESD--------LHPQFQNLLKKSQNNTTNPYVTQKG---- 266 +F+ G + L + + P Q G Sbjct: 326 RQFSEDESSAELGGDIVSPQTNQKRIPLDGLLPAIRSIIETLRPGEISKPTRIQLGDEYA 385 Query: 267 VEYIAIC--DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + + A L + + + +V++L+ Sbjct: 386 FSIVKLKYFAPKHRLNLEQDYARLRNMALQRQQAERYSSWVEELKKTIY 434 >gi|121602042|ref|YP_988820.1| SurA domain-containing protein [Bartonella bacilliformis KC583] gi|120614219|gb|ABM44820.1| SurA domain protein [Bartonella bacilliformis KC583] Length = 325 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 74/312 (23%), Positives = 130/312 (41%), Gaps = 6/312 (1%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKS-WAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + F+ L T F+ + + ++S +A +++ T+NG IT+ DI +RIA LKLQ+ Sbjct: 12 NHFLTLFFTAFLGVSSLFINVLSISPVFAQQTKVALTVNGNAITNYDIQRRIAFLKLQQK 71 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 L A ELI E LKK EI++ I + V+ F A ++ S L + Sbjct: 72 KENLSVQAKNELIDEMLKKIEIKQRNIDVSDSEVDAAFENFAVQNHMTINQLSEMLTQTN 131 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + HFK Y+ Q W +V + + G L + A+K T+ I Sbjct: 132 VTVKHFKDYIRGQIGWGRLVNARYQAEGGLLTEQEVAHKILKNGGQKPSTDEYTLQRIIF 191 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 + + ++ S CN I DV+I + +LE L ++ Sbjct: 192 VIPAHRRSEILQKRTQEANSFREHFNGCNNTRAQVKGILDVTIRSSVKILEPQLPQDWKK 251 Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP----TKIEKHEAE 303 + ++ T T G+E A+C + + + + S Q++ ++E + Sbjct: 252 FILETPAGKMTQVQETPNGIEAFAVCQIKRVSDDRVAQLLFSIQHSQEDIPQELETLSEK 311 Query: 304 YVKKLRSNAIIH 315 Y+K+L+ A I Sbjct: 312 YLKELQQAAHIK 323 >gi|56460109|ref|YP_155390.1| periplasmic parvulin-like peptidyl-prolyl isomerase [Idiomarina loihiensis L2TR] gi|56179119|gb|AAV81841.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Idiomarina loihiensis L2TR] Length = 622 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 41/407 (10%), Positives = 101/407 (24%), Gaps = 97/407 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ + +++ F + + Y + +NGE I D + Sbjct: 1 MLERIREGSQSYTAKAILVLIILTFALAGVGGYITSDTEDA-VAKVNGEEIPRSDYDRAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L +++LI + L Q E +G+ V Sbjct: 60 ENERSRLQEQFGDMFSAITSDPDYMRNLRSGVLEQLIEQELLVQYAEDNGMRVSPEQVKA 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 ++ + + L G F + + +++ Sbjct: 120 AIRDISQFRTAGQFDNDVYLMALRNAGYSPEAFAKVMQQDMTRNQLLRGLSATAFVLEPE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNIT-------------- 174 F + E +I Q+ +++ Sbjct: 180 AIAFMRLQSQSRSGGFLVASNESFEEQVEIAEQDIENFYQQNQDMFRTQEKLSVAYVELS 239 Query: 175 ----------------------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 ++Y +K+ ++A + Sbjct: 240 LAAVESEVEISDEEVRQYYDERQQQYSTEEERRVSHILIEFETDNAKKKAEEALAELKQG 299 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEY 269 + ++ G ++ + F + ++ + ++ T G Sbjct: 300 ADFSEVAQTYSDDTFSAEQGGDLGWIEAGMMDEDFDASVFELENVGDLSDVVETSFGYHI 359 Query: 270 IAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I + D R+ + +K + Q K E Y +K + A I Sbjct: 360 IKLTDLREGSVTPFNEVKDEVRQQLLTEKAED---RYFEKQQKLAEI 403 Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 29/249 (11%), Positives = 72/249 (28%), Gaps = 8/249 (3%) Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 E++ Q+L+ E + + EK + + ++ A S S + Sbjct: 374 NEVKDEVRQQLLTEKAEDRYFEKQQKLAEISFEQPDTLEPAAEEIGSTVRRSDLFTRDRA 433 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + ++K + + + +R Sbjct: 434 PTPLSDDVVLNNLFSEQLIKEKLNSDIIETSDD-----RSLVVRVTEHQPVRVKELDEVR 488 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQ 247 K+ ++ V+K + A E + E+ + +I V + + F Sbjct: 489 EKIVSELRVEKAQQLALEQANEWMQAWKAGEEVSDEIVWVDSIQRNNGEHPRTIVRELFS 548 Query: 248 NLLKKSQNNTTNPYVTQKG-VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 S + N G +A+ + + + L +Q + + ++ Sbjct: 549 MSPSASDESVFNTVALPNGDAAVVALTEVSPGSTDDSQLDELKSQMRNRQAQVMLQAFIN 608 Query: 307 KLRSNAIIH 315 L+++A I Sbjct: 609 NLKADADIK 617 >gi|84500721|ref|ZP_00998970.1| PPIC-type PPIASE domain protein [Oceanicola batsensis HTCC2597] gi|84391674|gb|EAQ04006.1| PPIC-type PPIASE domain protein [Oceanicola batsensis HTCC2597] Length = 282 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 30/305 (9%), Positives = 81/305 (26%), Gaps = 50/305 (16%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD---ISKRIALLKLQKING 70 +L+ V + V + + + T++G IT G + + + Q + Sbjct: 4 RLIQAAAVSFTLAMAAPVQAQDETTADTVVATVDGTEITLGHMILLRQSLPQQYGQLPDE 63 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 L + + +L+ +T S+ Sbjct: 64 VLFQGILDQLVQQTAL---------------------------------SKSYEGDTPRS 90 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + I V++ + ++ + EY +L Sbjct: 91 IRLALENEERGLIAAKAVRDVLSDGVTDEAIQQAYDDTYGNAEPETEYKAAHIL------ 144 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250 ++ + E ++ ++ + G+ + + + F+ + Sbjct: 145 -----VETEEEARAIVEELNGGGDFAELAQEKSTGPSAPNGGELGWFGKGMMVAPFEEAV 199 Query: 251 K-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + P TQ G I + + R + + + ++ ++ L Sbjct: 200 VGMEPGAVSEPVQTQFGWHVIQLQETR--TKDAPALEDVRDELRGQVEQQLVKAHIDALV 257 Query: 310 SNAII 314 NA + Sbjct: 258 ENANV 262 >gi|224369907|ref|YP_002604071.1| PpiD2 [Desulfobacterium autotrophicum HRM2] gi|223692624|gb|ACN15907.1| PpiD2 [Desulfobacterium autotrophicum HRM2] Length = 314 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 104/317 (32%), Gaps = 24/317 (7%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--- 70 + + + +F + + + RI +N ++IT +++ + + + Sbjct: 4 RKINFGLAIGVFTLFTLCGNVYAEIVDRIVAIVNEDIITLTELNTALRPYIDKIDSAGYT 63 Query: 71 ---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 +L + ++ L QE++K IT ++ + + ++ ED Sbjct: 64 GDKKEKILFKLRTDMLSRMVDRKLTDQEVKKFNITVTDKEIDAAIERLKQAQLMTQEDLE 123 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 + L+K G+ +++ + ++ + P ++ K + +I A + + R Sbjct: 124 TALEKDGMTFADYREKMRLEIMRPKLINYSVKSKVIVTDKDIAAYYAEHQAEYAGVRKFR 183 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + D + + + G Sbjct: 184 LSNILVSDESTAETV---------WNRLETGEDFKALAGELSKAPNAAEGGALGSFALDT 234 Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIE 298 L Q + + K TN T +G + + + + G +K + + + +E Sbjct: 235 LSDQLKVAIGKLEPGQYTNVIPTDQGFQIFFLDEIVESKGNALDEVKDEIQKKLYDSIVE 294 Query: 299 KHEAEYVKKLRSNAIIH 315 K +++ LR ++I Sbjct: 295 KKFNSWLESLREKSLIK 311 >gi|158425946|ref|YP_001527238.1| hypothetical protein AZC_4322 [Azorhizobium caulinodans ORS 571] gi|158332835|dbj|BAF90320.1| hypothetical protein [Azorhizobium caulinodans ORS 571] Length = 302 Score = 112 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 55/305 (18%), Positives = 124/305 (40%), Gaps = 8/305 (2%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + + + ++ C + + +++ ++G+ IT D+++R+ L +L + +K Sbjct: 1 MTSAFRRFLLVCALALPVLAPGVALAQVLVMVSGQPITSNDVAQRMKLHQLIENKSPPQK 60 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 ++ELI E +K + + I D + VN F A +G +A+ ++ + G+ F Sbjct: 61 QVLEELIDEKIKVLQAARFSIEADEDDVNRMFSNIAERSGRTADQLTASFAQSGLKVQTF 120 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDNKL 192 K L +W V+ + I + T EY++R ++ + Sbjct: 121 KDKLRADYVWGQYVRARAPVVNIRDSDVIAALNKQGNADAFTATEYVLRPIILVVGGGSN 180 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LK 251 + + + C+ + + + + L S++ + + + K Sbjct: 181 AYGSRLAEANALRAKF-----NGCDAGLQMIKGMKETVVRSPINRLSSEIPEKMRAVLDK 235 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 T P V+Q GVE A+C+KR + GE + K + + + + ++ + +LR Sbjct: 236 TEVGRLTPPEVSQSGVETFAVCEKRTVKGESSKKRDIKDELSNAQFQEQSKRMMAELRKT 295 Query: 312 AIIHY 316 +I Y Sbjct: 296 MLIQY 300 >gi|91794237|ref|YP_563888.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella denitrificans OS217] gi|121956465|sp|Q12K61|SURA_SHEDO RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|91716239|gb|ABE56165.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella denitrificans OS217] Length = 434 Score = 112 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 99/308 (32%), Gaps = 15/308 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +K ++ + + R+ IN +I + +I +A ++ Sbjct: 1 MKHSKKIVTALLALAMSQTVMAAPVALDRVSVQINDGIILESEIGNMLATVRANANKSNQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L ++ LI+ L+ Q E+ G+ ++ A++ L+ L Sbjct: 61 TLPSEQALRTQVIERLILTRLQLQMAERIGLQIGDLQLDQTIESIAKDQKLTVSQLQQQL 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + G+ + +++ L + ++ + + EI + M+ ++E + Sbjct: 121 ENDGLSFSQYREQLREEITLGEIQRIQVQRRIQVSPQEISGLVKLMQEQGLKEVEFQIGH 180 Query: 185 FSIPDNKLQNQGFVQ---KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I + ++ KR + + +S + G Y+ ++ Sbjct: 181 ILIDVPSEPSSEQLEASSKRANIVLKRLNEGEDFRSTAIASSSGPKALEGGIWDYMNINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297 + F + + + P + G I + D R E ++ + +P Sbjct: 241 MPTLFAEVVNGAKVGDIIGPIKSGSGFHIIKVMDARGLQTKEVEEVKSRHILLKPSPILS 300 Query: 298 EKHEAEYV 305 E+ + Sbjct: 301 EERAKAML 308 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 36/292 (12%), Positives = 76/292 (26%), Gaps = 23/292 (7%) Query: 49 EVITDGDIS------------KRIALLKLQKINGELEK---IAVQELIVETLKKQEIEKS 93 E IT G+I + I+ L L++ LI + + Sbjct: 136 EEITLGEIQRIQVQRRIQVSPQEISGLVKLMQEQGLKEVEFQIGHILIDVPSEPSSEQLE 195 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + +N V + + S +G ++ V Sbjct: 196 ASSKRANIVLKRLNEGEDFRSTAIASSSGPKALEGGIWDYMNINEMPTLFAEVVNGAKVG 255 Query: 154 LKYGNLEM-----EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 G ++ I + E + + P L + + ++ Sbjct: 256 DIIGPIKSGSGFHIIKVMDARGLQTKEVEEVKSRHILLKPSPILSEERAKAMLVNFQKQI 315 Query: 209 RLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKG 266 +++ G+ + P+F L +N + P+ T G Sbjct: 316 LSGEADFAELARQYSEDPGSAAKGGELGWSSPDVYVPEFAQTLNSLKENEMSEPFRTTHG 375 Query: 267 VEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + DKR K + ++ ++RS+A I + Sbjct: 376 WHLTQLMDKRKTDATEQFNSNRAHQLIFRRKFNEELQAWLDEMRSDAYIEVF 427 >gi|332534336|ref|ZP_08410179.1| survival protein SurA precursor [Pseudoalteromonas haloplanktis ANT/505] gi|332036246|gb|EGI72719.1| survival protein SurA precursor [Pseudoalteromonas haloplanktis ANT/505] Length = 431 Score = 112 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 105/317 (33%), Gaps = 19/317 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 + L ++ + + ++ +N VI ++ I +K Q Sbjct: 1 MNLKKLLTSAVLSASLCQSVMAAPVEIDKVIGVVNQGVILKSEVDTIIDRVKKQAQEQGQ 60 Query: 71 ------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L AV+ L+ + L Q E+ G+ + ++ A+ G + D + Sbjct: 61 QLPKDETLRVQAVERLVNQALMMQMAERMGLQISDSQLDQTLANMAKEQGGTIADLRRTI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRT 182 + G +++ + + V + + E E+ + + + EY I Sbjct: 121 EGSGESFQAYREEIRKEITTQQVTRASVDRRIYISEQEVDNLLKIMETQGQSAEEYDIGH 180 Query: 183 VLFSIPDNKLQNQGFVQK-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 +L IP++ ++ K R E + +S + G+ Y+ ++ Sbjct: 181 ILIDIPNDATADEIADAKTRADKVIELLNDGQEFKRIAISSSSGSKALEGGQLGYMGINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD---LGGEIALKAYLSAQ----NT 293 + F + + + + P + G I + D R + ++ + + Sbjct: 241 MPSLFAEAVKGQKKGAIVGPLRSGAGFHIIKVQDVRGLQVVETTEVRSRHILIKPSIILS 300 Query: 294 PTKIEKHEAEYVKKLRS 310 K A + K LR+ Sbjct: 301 EEKARSMLAGFAKDLRA 317 Score = 77.4 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 34/283 (12%), Positives = 86/283 (30%), Gaps = 10/283 (3%) Query: 44 TTINGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +++ + I++ ++ + +++ Q + E E LI E + ++ V Sbjct: 146 ASVDRRIYISEQEVDNLLKIMETQGQSAE-EYDIGHILIDIPNDATADEIADAKTRADKV 204 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM- 161 ++ S +G + V G L Sbjct: 205 IELLNDGQEFKRIAISSSSGSKALEGGQLGYMGINEMPSLFAEAVKGQKKGAIVGPLRSG 264 Query: 162 ----EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 I + + + + P L + A++ R Sbjct: 265 AGFHIIKVQDVRGLQVVETTEVRSRHILIKPSIILSEEKARSMLAGFAKDLRAGTADFGE 324 Query: 218 KLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 ++++ + G+ + + P F++ L +N + P+ TQ G + + K Sbjct: 325 LAKEYSEDPGSALKGGEYDWTDPTTYVPAFKDTLLSLKENEISEPFRTQFGWHIVQLLGK 384 Query: 276 RDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 R E+A + K ++ + +++R A + + Sbjct: 385 RVADKTELAKRNRAHGMLFNRKFKEESFNWQQEMREQAHVEIF 427 >gi|222056790|ref|YP_002539152.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. FRC-32] gi|221566079|gb|ACM22051.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. FRC-32] Length = 308 Score = 112 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 88/311 (28%), Gaps = 49/311 (15%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSR---IRTTINGEVITDGDISKRIA----LLKLQ 66 KL + + + + +NG IT D +K + LK Sbjct: 8 KLFFVALCITAVFGCKGQTGTGAKEEKKSGPVLAEVNGSTITGSDFNKEVEALPPYLKPM 67 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 E +K + ++V L Q+ +K GI + Sbjct: 68 AETVEGKKELLDTMVVRELILQQAKKDGIDKSQAVADKL--------------------- 106 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + L + I +K + + E+ K K +R Sbjct: 107 ---------EELKNRIIVEAFLKKKVEEQAKIGDAELQDFYNKNKEKFRTGEQVRASHIL 157 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + ++ + +K + G + + + P+F Sbjct: 158 VKTEPEA---------QEILKQLKAGGNFEELAKKQSIDAAAAKGGDLGWFGKGSMLPEF 208 Query: 247 QNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAE 303 +N + + T+ T+ G I + KR G +K + A P K ++ + Sbjct: 209 ENAVFGLKEGATSGIVQTKYGYHIIKLTGKRPAGVRPLDEVKEQIKAAILPEKQQEVFKK 268 Query: 304 YVKKLRSNAII 314 + L+ A + Sbjct: 269 LKEDLKKGAKV 279 >gi|167629347|ref|YP_001679846.1| ppic-type ppiase domain protein, putative [Heliobacterium modesticaldum Ice1] gi|167592087|gb|ABZ83835.1| ppic-type ppiase domain protein, putative [Heliobacterium modesticaldum Ice1] Length = 338 Score = 112 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 90/296 (30%), Gaps = 26/296 (8%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----------ELEKIAVQELIVET 84 + + ++NGE I+ D+ KRI K + LE+ ++ +I E Sbjct: 22 GCSSGGNVVASVNGETISRSDLDKRINRYKEELSRSGGADSKELMANLERQELEHMIDEM 81 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 L QE +K I V + + AE L + + ++ + + I+ Sbjct: 82 LFTQEAKKRNIEVSDGQVAAELAKEKQQFPSDAEFQE-ALKRYRLTEDELSGIIRTRLIF 140 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 + + ++ + + + ++ + + + Sbjct: 141 NGLYDA-VTSDIQISDADVEKYYRDNPDKFKQNRQVKASHILLKTEEEAKAIIAE----- 194 Query: 205 AEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLKKSQNNTT--NPY 261 R + ++ + G Y D+ +F + + T P Sbjct: 195 ----LERGADFAQLAVQKSTDSTAAQNKGDLGYFQAEDMVKEFSDAAFSMKKGETSRTPV 250 Query: 262 VTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + G I + D ++ +K + + ++ + +++ A I Sbjct: 251 KSNFGYHVIRVEDIKEARQQRFDEVKDQIRVDLGADRKQERFESWFADVKAQAKIE 306 >gi|113969251|ref|YP_733044.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-4] gi|121956472|sp|Q0HLT0|SURA_SHESM RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|113883935|gb|ABI37987.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-4] Length = 434 Score = 112 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 104/317 (32%), Gaps = 19/317 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +K + + + + R+ IN ++ + +I+ I +K Sbjct: 1 MKPSKHLIFALFALAISQPTMAAPQPIDRVAVQINDGIVLESEITNMIDTVKANARAANQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L ++ LI+ L+ Q ++ G+ ++ AR ++ + Sbjct: 61 SLPSDSALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKMTVAQMQQKI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + +G+ +++ L + ++ + + EI + ++ +++ + Sbjct: 121 ESEGLSFGQYREQLREEITLGEIQRIQVQRRIQVSPQEITGLVKLIQEQGMKDVEYQIGH 180 Query: 185 FSIPDNKLQNQGFVQ---KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I N ++ KR E +S + G Y+ ++ Sbjct: 181 ILIDVPNNPNSEQLEASSKRANAVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMNINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQ----NT 293 + F + + + + P + G I I D R E ++ + + Sbjct: 241 MPTLFAEVINGAKKGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSPILS 300 Query: 294 PTKIEKHEAEYVKKLRS 310 + + +++K++RS Sbjct: 301 EDRAKAMLEQFLKQIRS 317 Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 37/295 (12%), Positives = 85/295 (28%), Gaps = 29/295 (9%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI---TFDSNTVNYF 105 E IT G+I + ++Q E+ + LI E K + G +N + Sbjct: 136 EEITLGEIQRIQVQRRIQVSPQEITGLVK--LIQEQGMKDVEYQIGHILIDVPNNPNSEQ 193 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGD-------------NHFKQYLAIQSIWPDVVKNDF 152 ++ E S D + + + +++ +V+ Sbjct: 194 LEASSKRANAVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMNINEMPTLFAEVINGAK 253 Query: 153 MLKYGNLEMEIPANKQKMKN-------ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + E R +L +++ Sbjct: 254 KGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSPILSEDRAKAMLEQFL- 312 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 ++ R K + +++ G+ + S P+F L SQ+ + P+ T Sbjct: 313 KQIRSGEAKFEDLARQYSEDPGSAAKGGELGWAEPSIYVPEFAQTLNSLSQDQISEPFRT 372 Query: 264 QKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + ++R + K + ++ ++R++A I + Sbjct: 373 THGWHITQLEERRKTDATDQFNTNRAHQLIFRRKFNEELQNWLDEMRADAYIEVF 427 >gi|239818232|ref|YP_002947142.1| SurA domain protein [Variovorax paradoxus S110] gi|239804809|gb|ACS21876.1| SurA domain protein [Variovorax paradoxus S110] Length = 469 Score = 112 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 95/302 (31%), Gaps = 18/302 (5%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK------INGELEKIAVQELI 81 P + + I +N E IT+ ++ R+ L + EL ++ ++ LI Sbjct: 51 APSTAAPVQRAAEYIVALVNSEPITNTEVQSRVTRLIRENAEAERVPRAELTRLVLERLI 110 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 E + Q +++GI D ++ AR +S E+ + +GI F+ L Q Sbjct: 111 SERAQLQLAKENGIKVDEVAIDQAEQTVARQNQISVEELRRRVVAEGISQREFRNDLRDQ 170 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV------LFSIPDNKLQNQ 195 + + + K + E + +N ++ ++ + + + Sbjct: 171 LLLTRLRDREVESKVKISDAEADEYLRDQRNAPTKDAALQNINLAHLLVAVPENATEAQV 230 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQ 254 +Q+R + + +++ + + G F + Sbjct: 231 ATLQQRAQGLAQRARAGEDFAKLVQENSDSPDRANGGAVGMRTADRYPSLFVEATQSTPV 290 Query: 255 NNTTNPYVTQKGVEYIAICDK-----RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 N P + G + + K D ++ N P + + + + Sbjct: 291 NGIAGPIRSGAGFHVLKVLAKAQLGATDATVTQTQVRHILLLNDPKRTTAQAVAQLAEFK 350 Query: 310 SN 311 Sbjct: 351 RR 352 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 45/123 (36%), Gaps = 2/123 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 V + + + R + G + P+F+ + + + Sbjct: 341 QAVAQLAEFKRRLQARTADFAGLARDNSQDASAKEGGDLGWSRPGQFVPEFEEAMDRLAP 400 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++P V++ GV I + +R+ A + A ++E+ + +V++ R+ A Sbjct: 401 GQISDPVVSRFGVHLIQVVGRRESKLTQAEQREAARAVLREQRVEEAFSTWVQETRARAY 460 Query: 314 IHY 316 + Y Sbjct: 461 VEY 463 >gi|332295328|ref|YP_004437251.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermodesulfobium narugense DSM 14796] gi|332178431|gb|AEE14120.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermodesulfobium narugense DSM 14796] Length = 409 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 101/322 (31%), Gaps = 31/322 (9%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI--------AL 62 F+K + + ++I + +Y + T+NGE I + K + Sbjct: 36 GFLKNIKFWLGVLIVVLAVSGAYTLFEFQP--VATVNGEPIRRYEYEKTLGDAVSYYEQY 93 Query: 63 LKLQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 E L+K + +I + QE +K I + V+ + ++ Sbjct: 94 GINLYDPKEASFFLELKKQVLNHMIDNKIITQEAKKENIKITPSEVDARIDEIKKSFPSE 153 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + + + ++ + + Q + + + E E+ A ++ K V+ Sbjct: 154 KDFYEALAKQKISMGE--LRNIIEQQLTAEALFKKLTSNVTISEAEVKAYYEEHKKEFVQ 211 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQ 235 I + + N E + ++++ G Sbjct: 212 PEQIHLRHILVKTEQEANNI---------YEQLKQGKDFATLAKEYSIDTPTKDKGGDLG 262 Query: 236 YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQN 292 ++ ++ L P + + N + P + G I R +K L+AQ Sbjct: 263 WISKASLVPDLAKAADELKDNEFSKPIKSPFGYHIIEKLGTRPSKELSFDEVKNTLTAQL 322 Query: 293 TPTKIEKHEAEYVKKLRSNAII 314 K + ++ K+ + + I Sbjct: 323 LRNKQAQSLEKWFKEKKEQSKI 344 >gi|217978373|ref|YP_002362520.1| hypothetical protein Msil_2224 [Methylocella silvestris BL2] gi|217503749|gb|ACK51158.1| conserved hypothetical protein [Methylocella silvestris BL2] Length = 315 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 112/280 (40%), Gaps = 4/280 (1%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 + I +ING+ IT+ DI +R+ LL++ + + A++ L + L+ E EK G+ Sbjct: 34 PVHAQAIVASINGDPITNIDIDQRMKLLRVLRKPAT-REAAIESLFRDRLQIHEAEKYGV 92 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 ++ V+ A L + S L G+ ++ FK Y + +V+ Sbjct: 93 NPRDADISQQIVKTATEMNLQPQALLSALQAAGVSEDQFKSYFRANLAFTVLVQA-LNKG 151 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 E ++ A +K + R K+AE+ R R Sbjct: 152 VEASETQVRAELEKQGGKAAAGTSYTVQQIIFTLPIGTTPAILAARSKEAEQLRSRFTDC 211 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274 + A ++DV++ +L Q + L K + T P + G+E +A+C Sbjct: 212 -KSGAEMARTLNDVTVRDQLTRSSHELGEQLRQLLDKTAIGRLTPPQRSTSGLEMVAVCA 270 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + A++ ++ + I++ +K+LR A+I Sbjct: 271 RGPAKDDTAIRQTIAQKLLAAHIQEDGERRLKELRDRAVI 310 >gi|77458207|ref|YP_347712.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens Pf0-1] gi|77382210|gb|ABA73723.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens Pf0-1] Length = 317 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 40/318 (12%), Positives = 99/318 (31%), Gaps = 21/318 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-----------RIA 61 +KL T ++L + V + A + + +NGE I++ + + +A Sbjct: 1 MKLKTLCWLLTGWLSVGM------ANNEPVAARVNGEAISEFRLERFFAEYLEDQGRAVA 54 Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 ++ K +L + A+ LI + L QE K G+ D TV + G + + Sbjct: 55 SIRNPKAYKQLRQAALDTLIDKELLWQESRKRGVKIDEQTVREQVERTRTAIGGTDKFLQ 114 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 D + + + + + + + + + + R Sbjct: 115 RLQDAGFDEASFTEYTHRELAAQRMFAELTQVQAPDEQTVRAFFAEHRAEMAAPEQVQAR 174 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF-ASKIHDVSIGKAQYLLES 240 +L + + + + + + + + + + + G Y Sbjct: 175 HILIKVAGDADAATVEAARLRLEELRAAIAGGQTFASVAQSGSEDVTASQGGDLGYFARG 234 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKI 297 + P F+ + T G I + + ++ E + A + Sbjct: 235 QMVPAFETAAFALKPGEVSEAVRTPFGWHLIFVENHKEAADVPEEQGLETVRAYLARQQQ 294 Query: 298 EKHEAEYVKKLRSNAIIH 315 + + + +LR+ I Sbjct: 295 TQARRQVLAQLRAENRIE 312 >gi|260432023|ref|ZP_05785994.1| ppic-type ppiase domain protein [Silicibacter lacuscaerulensis ITI-1157] gi|260415851|gb|EEX09110.1| ppic-type ppiase domain protein [Silicibacter lacuscaerulensis ITI-1157] Length = 282 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 87/301 (28%), Gaps = 46/301 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 L +P+ + + + +NG+ IT G + A L Q +L+ Sbjct: 7 FLPSLALAAVMALPVAAESQPST-DTVVARVNGDEITLGHVIATAASLPPQYQ--QLDDE 63 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + + IVE L + + S + + Sbjct: 64 VLYQFIVEQL-----------------------------IQQQLLSQEQEGLTRLNALML 94 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + V + + ++ + Q + E+ +L Sbjct: 95 ENEERSLKAVQTVNQITDAQVTDDAIQAAYDAQFAEFQGEDEFNASHIL----------- 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 ++ K+ + ++ ++ + G + + + P+F+ + + Sbjct: 144 VATEEEAKEIKAQLDDGADFAELAKEKSTGPSGPNGGALGWFGKGQMVPEFEQAVIGLEK 203 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 ++P TQ G + + DKR E A + + + ++ + +L + Sbjct: 204 GQVSDPVQTQFGWHVVILNDKR--KSEAPELAEVRDELAQSVRQEAIQAKIDELTQAGNV 261 Query: 315 H 315 Sbjct: 262 E 262 >gi|296445011|ref|ZP_06886972.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylosinus trichosporium OB3b] gi|296257432|gb|EFH04498.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylosinus trichosporium OB3b] Length = 294 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 93/307 (30%), Gaps = 49/307 (15%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL----KLQKIN 69 K L ++ + +++ + +++ +NG I+D D+ + L Q Sbjct: 7 KRLRGRGAVVALGVSVLLTAVALPAQAKVLAKVNGVEISDDDVKTALDDLGSGLPRQLEG 66 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 E + LI E L Q+ ++ + + Sbjct: 67 KARENYVLDFLIDEQLVVQKAQRDKLGESPDFAKKL------------------------ 102 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 YL +++ ++ ++ ++ E +L D Sbjct: 103 ------AYLRDKALMESLLGKIAKDAVTEDAIKKTYDEAAKNQKPETEVHAHHILVPTED 156 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 R++ +D K+ SK G + + + P+F + Sbjct: 157 EAKAALK------------RVKGGEDFGKVADEVSKDPGARGGDLGWFTKDRMVPEFAEA 204 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 K ++P TQ G I + +KR + Q + +K +++ + +L Sbjct: 205 AYKLEPGQISDPVKTQFGWHVIKLDEKRPKV--FPPLDQVREQVSRYVAQKAQSDLIVQL 262 Query: 309 RSNAIIH 315 R A I Sbjct: 263 REGAKIE 269 >gi|114564239|ref|YP_751753.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella frigidimarina NCIMB 400] gi|121956468|sp|Q07YK0|SURA_SHEFN RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|114335532|gb|ABI72914.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella frigidimarina NCIMB 400] Length = 434 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 33/310 (10%), Positives = 100/310 (32%), Gaps = 15/310 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +K ++ + S + R+ IN +I + +I+ ++ +K Sbjct: 1 MKHSKKIIFALLALAMSNTSMAAPMPLDRVSVQINDGIILESEITNMVSTVKANAKAANQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L ++ LI+ L+ Q E+ G+ ++ A+ ++ + Sbjct: 61 TLPSDDALRTQVIERLILTHLQMQMAERIGLQIGDLQLDQTIENIAKEQKVTVAQMQQTI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + +G + +++ L + ++ + + EI + ++ +++ + Sbjct: 121 ESEGTSFSQYREQLRQEVTLGEIQRIQVQRRIQVSPQEISGLVKLIQEQGLKDVEFQIGH 180 Query: 185 FSIPDNKLQNQGFVQ---KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I ++ +R + + + +S + G ++ ++ Sbjct: 181 ILIEVPSNPTSEQLEGASRRAEIVLKRLNNGDDFRSTAIASSSGPKALEGGIWDFMNINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297 + F + + + + P + G I + D R E ++ + +P Sbjct: 241 MPTLFAEVISNAKKGDIIGPIKSGSGFHIIKVVDTRGLQTQEVEEVKSRHILLKPSPILS 300 Query: 298 EKHEAEYVKK 307 E + Sbjct: 301 EDRAKAMLAN 310 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 20/149 (13%), Positives = 43/149 (28%), Gaps = 4/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + V E R +L +++ + R +++ Sbjct: 279 QTQEVEEVKSRHILLKPSPILSEDRAKAMLANFL-AQVRAGDADFAKLATQYSEDPGSAA 337 Query: 230 SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAY 287 G+ + S P+F Q L + + P+ T G + + +R Sbjct: 338 KGGELGWADPSMYVPEFTQTLASLQEGQYSEPFRTTHGWHVVQLESRRKTDATEQFNSNR 397 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + ++ ++RS A I Sbjct: 398 AHQLIFRRKFNEELQNWLDEMRSEAYIEI 426 >gi|119470578|ref|ZP_01613281.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Alteromonadales bacterium TW-7] gi|119446279|gb|EAW27556.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Alteromonadales bacterium TW-7] Length = 431 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 43/317 (13%), Positives = 106/317 (33%), Gaps = 19/317 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 + L ++ + ++ ++ +N VI +++ + +K Q Sbjct: 1 MTLKKLLVSTVLSISLCQNAFAEPVEIDKVVGIVNQGVILQSEVNSIVDRVKKQAQEQGQ 60 Query: 71 ------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L A++ L+ + L Q E+ G+ + ++ A+ G + D + Sbjct: 61 QLPKDETLRVQAMERLVSQALMMQMAERMGLQISDSQLDQTLANIAKEQGGTISDLRRTV 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRT 182 + G +++ + + V + + + E E+ + + EY I Sbjct: 121 EASGDSFQAYREEIRKEITTQQVTRANVDRRIYISEQEVDNLLKIMASQGQSAEEYDIGH 180 Query: 183 VLFSIPDNKLQNQGFVQK-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 +L IP+ ++ K R E + +S + G+ ++ ++ Sbjct: 181 ILIDIPNEATADEISAAKTRADKVIELLNDGQEFKRIAISSSSGSKALEGGQLGWMGINE 240 Query: 242 LHPQFQNLLKKSQNN-TTNPYVTQKGVEYIAICDKRD---LGGEIALKAYLSAQ----NT 293 + F +K + + P + G I + D R + ++ + + Sbjct: 241 MPSLFAEAVKSKKKDAIVGPLRSGAGFHIIKVQDVRGLQVVETTEVRSRHILIEPSIILS 300 Query: 294 PTKIEKHEAEYVKKLRS 310 K A + K LR+ Sbjct: 301 EEKARNMLAGFAKDLRA 317 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 36/283 (12%), Positives = 85/283 (30%), Gaps = 10/283 (3%) Query: 44 TTINGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++ + I++ ++ + ++ Q + E E LI + E S ++ V Sbjct: 146 ANVDRRIYISEQEVDNLLKIMASQGQSAE-EYDIGHILIDIPNEATADEISAAKTRADKV 204 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM- 161 ++ S +G V G L Sbjct: 205 IELLNDGQEFKRIAISSSSGSKALEGGQLGWMGINEMPSLFAEAVKSKKKDAIVGPLRSG 264 Query: 162 ----EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 I + + + + P L + A++ R Sbjct: 265 AGFHIIKVQDVRGLQVVETTEVRSRHILIEPSIILSEEKARNMLAGFAKDLRAGNADFGE 324 Query: 218 KLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 ++++ + G+ + + P F++ L Q+ + P+ TQ G + + DK Sbjct: 325 LAKEYSEDPGSALKGGEYDWTDPTTYVPAFRDTLLSLKQDEISEPFRTQFGWHIVQLLDK 384 Query: 276 RDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 R E+A + K ++ + +++R A + + Sbjct: 385 RVADKTELAKRNRAHGMLFNRKFKEESFNWQQEMREQAHVEIF 427 >gi|212703745|ref|ZP_03311873.1| hypothetical protein DESPIG_01793 [Desulfovibrio piger ATCC 29098] gi|212672827|gb|EEB33310.1| hypothetical protein DESPIG_01793 [Desulfovibrio piger ATCC 29098] Length = 650 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 48/402 (11%), Positives = 109/402 (27%), Gaps = 95/402 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + ++ F + ++++F + S S+ + +NGE IT + Sbjct: 1 MLDYIRSNAQSFGVKVAFAIIILVFMFWGVGSLTDGGSSN-VVAKVNGEAITAQQFEQAY 59 Query: 61 A------------LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV- 107 L + + +L + + ELI L +QE + G+T ++Y Sbjct: 60 QRAAEYAMRNDPSLTREALVQQKLGRQVLNELISAQLIRQEAARVGMTVSPEEMHYVVSK 119 Query: 108 ---QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK--------------- 149 E + ++ Q + ++Q LA + V++ Sbjct: 120 LPAFQDAQGKFDPEAYKRAIEAQRMSVAEYEQGLADSILRDKVMRTVAGSAWAAGGEARK 179 Query: 150 ------------------NDFMLKYGNLEME--IPANKQKMKNITVREYLIRTVLFSIPD 189 DF E E K + + + V + Sbjct: 180 YYDFLTQQRAVEYLYLPAADFAASVKPTEEELGAWYEAHKAELASQPRVEVEYVAVAPES 239 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCN-------------------------------- 217 + +K E ++ R + Sbjct: 240 LVRPESVSAEAALKWYEANKQRFRQPEQVKVAHILVPLAENAPEAAVKQAMEKAARIRSE 299 Query: 218 ----KLEKFASKIHDVS----IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVE 268 A + + G+ ++ F++ + P +Q G+ Sbjct: 300 AEKGDFAAVADANNGPNAAGPGGELGWIQRGQTVKPFEDAAWALQPGQISEPVRSQFGLH 359 Query: 269 YIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 I + D++D ++A + A + + + + L Sbjct: 360 IIKMEDRKDASVQPFAEVEAEVRATLAKQEGVEKVNDVLDSL 401 >gi|254511296|ref|ZP_05123363.1| ppic-type ppiase domain protein [Rhodobacteraceae bacterium KLH11] gi|221535007|gb|EEE37995.1| ppic-type ppiase domain protein [Rhodobacteraceae bacterium KLH11] Length = 282 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 85/304 (27%), Gaps = 52/304 (17%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN---GEL 72 L +P+ + +S + +NG+ IT G + + L Q L Sbjct: 7 FLPSLALTAVLALPLAAETKP-DASTVVARVNGDEITLGHVIATASALPAQYQQLEDDVL 65 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 +++L+ + L E E+ Sbjct: 66 FDFILEQLVQQHLLGLEQEELN----------------------------------TASA 91 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + A V+ + ++ + Q + E+ +L ++ Sbjct: 92 LRLENEARSLRAVQTVEALAAAAVTDEAIQAAYDAQFAEFEGADEFNASHILVETEEDAN 151 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 + + + ++ ++ + G + + P+F+N + Sbjct: 152 ALKTQLDE-----------GADFAELAKENSTGPSGPNGGALGWFGTGQMVPEFENAVLS 200 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + ++P TQ G + + DKR + + + ++ + +L Sbjct: 201 LEKGQVSDPVQTQFGWHLVTLNDKRKTQA--PELDAVRTELAQSIQQEAIQARIDELTQQ 258 Query: 312 AIIH 315 A I Sbjct: 259 AQIE 262 >gi|254466473|ref|ZP_05079884.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacterales bacterium Y4I] gi|206687381|gb|EDZ47863.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacterales bacterium Y4I] Length = 273 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 37/281 (13%), Positives = 80/281 (28%), Gaps = 50/281 (17%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGI 95 ++ + T+NGE IT G + L Q L + +L+ +T KQ++ Sbjct: 19 ANTVVATVNGEEITIGHMIMARENLPEQYKQLPDDVLFNAILDQLVQQTALKQQLH---- 74 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + + + +V++ Sbjct: 75 -----------------------------GEVPRYVELSVENEERAMLAANVIEMVMDNA 105 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 G + ++ E+ +L ++ D + Sbjct: 106 SGEEALRAAYEEKYSSGDGGDEFHAAHIL-----------VETEEEALDVIKELDDGADF 154 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICD 274 ++ ++ S G + + P+F+ + K + P TQ G I + + Sbjct: 155 ATLAKERSTGPSGPSGGDLGWFTTGRMVPEFEEAVIKLRSGEVSGPVQTQFGWHVILLNE 214 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 +R E + AQ +K V +L + + I Sbjct: 215 RRKT--EAPEFDEVRAQLADELQQKAVEARVNELTAASEIE 253 >gi|149927949|ref|ZP_01916199.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Limnobacter sp. MED105] gi|149823388|gb|EDM82621.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Limnobacter sp. MED105] Length = 456 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 104/298 (34%), Gaps = 19/298 (6%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQE 79 + + A I +N ++IT ++++++AL++ Q EL K + Sbjct: 41 LGASNGSGAAAIDGIVAVVNTDIITRSELNRQVALIERQMSRRGAPLPDRIELRKQVLDR 100 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 ++++ + Q+ E+ GI + + + A GLS EDF + L ++G+ F++ + Sbjct: 101 MVMDRAQLQKAEEVGIRIEEAQIEAAMARVADQNGLSLEDFLARLQEEGVSPARFREEVR 160 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN----ITVREYLIRTVLFSIPDNKLQNQ 195 + + + + + + EI E +L P + Sbjct: 161 SEITLGRLREREVEARIQVSDAEIQNYLAARTKGGAAPNQPEVNWVQLLVKAPSDASGAT 220 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 + +A E L+ K + + ++ G+ + + F L K+Q Sbjct: 221 LNQARGKVEAIEKALKDGKTVEAIVQTNPELAIDGTGQMGWSGFDAVPTLFSEFLSKAQL 280 Query: 256 NTTNPYVTQKGVEYIAICDKRD-------LGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 N + G + + ++R+ ++ + P E + Sbjct: 281 NAVQTIRSPNGFHVLKVLERRESGAALDSTPVTQTRARHILIRPGPDITEAEARRRLN 338 Score = 96.3 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 16/137 (11%), Positives = 44/137 (32%), Gaps = 2/137 (1%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + P + ++ E+ + ++++ G +L D Sbjct: 318 RHILIRPGPDITEAEARRRLNFALEQLQGGAATFDTLAKRYSQDGSASKGGDLGWLYPGD 377 Query: 242 LHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEK 299 P+F+ + + + + ++ G I + ++R + K E+ Sbjct: 378 TVPEFEREMNQLGIGGVSPVFQSRFGFHIIQVVERRQQAASEERQRQAARQAIRANKSEE 437 Query: 300 HEAEYVKKLRSNAIIHY 316 E++++LR I Sbjct: 438 SYQEWLRQLRDATFIEI 454 >gi|126738446|ref|ZP_01754151.1| PPIC-type PPIASE domain protein [Roseobacter sp. SK209-2-6] gi|126720245|gb|EBA16951.1| PPIC-type PPIASE domain protein [Roseobacter sp. SK209-2-6] Length = 283 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 35/280 (12%), Positives = 75/280 (26%), Gaps = 50/280 (17%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGI 95 ++ + T+NGE IT G + L Q L + +L+ +T KQE+ Sbjct: 29 ANTVIATVNGEAITLGHMIMSRENLPEQYKQLPDDVLFNAILDQLVQQTALKQELN---- 84 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + Q V+ Sbjct: 85 ----------------------------GEVPHDVQLALDNESRAQLAAN-VIGRVMRSA 115 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + + K+ E+ +L ++ D ++ Sbjct: 116 TTDEALRAAYEKKYSSGDGGDEFHASHIL-----------VESEETALDIKQELDAGADF 164 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICD 274 +++++ + G + + + P+F+ + + + P TQ G I + + Sbjct: 165 AVLAKEYSTGPSGPNGGDLGWFTQGRMVPEFEEAVLEMRSGEVSEPVQTQFGWHVIMLKE 224 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +R Q + + L S A I Sbjct: 225 RRKTAA--PSFEEARGQLVQELQNEAIEARISALTSAAEI 262 >gi|192288942|ref|YP_001989547.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris TIE-1] gi|192282691|gb|ACE99071.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris TIE-1] Length = 316 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 81/280 (28%), Gaps = 47/280 (16%) Query: 40 SRIRTTINGEVITDGDIS---KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 + + +NG I D+ + + Q ++ + LI + + E I Sbjct: 41 NPVLAKVNGAEIRQSDVDLAEQELGPSLAQLDPASRKENVLAFLIDMKIVAKAAEDKKIQ 100 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 +++ + + + DV+ + Sbjct: 101 DNADFKKRL------------------------------DFARNRLLMDDVLAAEGKAAT 130 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + M+ ++ + +E R +L D ++K Sbjct: 131 TDEAMKKVYDEAAKQISGEQEVHARHILVETEDEAKAVAEELKK-----------GADFA 179 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 +K + G + + + P+F ++P TQ G I + +K Sbjct: 180 ELAKKKSKDPGASDGGDLGFFTKDQMVPEFSAAAFALEPGKISDPIKTQFGWHIIKVEEK 239 Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 R+ + AQ K +++YV KLR A I Sbjct: 240 RNRKP--PSFDQVKAQIEQYVTRKAQSDYVSKLRQAAKIE 277 >gi|188591256|ref|YP_001795856.1| peptidyl-prolyl cis-trans isomerase (ppiase), involved in maturation of outer membrane proteins [Cupriavidus taiwanensis LMG 19424] gi|170938150|emb|CAP63136.1| peptidyl-prolyl cis-trans isomerase (PPIase), involved in maturation of outer membrane proteins [Cupriavidus taiwanensis LMG 19424] Length = 489 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 41/300 (13%), Positives = 89/300 (29%), Gaps = 24/300 (8%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKI--------NGELEKIAVQELIVETLKK 87 + + +N VIT ++ R ++ Q +L ++ L++E ++ Sbjct: 74 SQLIDEVVAVVNNSVITRRELLDRADEIESQLRAGGRPVPARADLLGEVLERLVMERVQT 133 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 Q + +GI V+ A+ ++A + ++ G+ ++ L Q + Sbjct: 134 QAAQDAGIRVTDQEVDRAIESVAQQNQMNAAELRRRVEASGMTWTKYRDELRKQVQVIRL 193 Query: 148 VKNDFMLKYGNLEMEIPAN----KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + + K + EI + EY + +L +P+N Q + Sbjct: 194 REREVDSKVQVYDGEIDNYLAARGGQGAAAGPTEYNMAQILVRVPENASDAQKQALRAKA 253 Query: 204 DA-EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP-- 260 + + + + G + L F N + Q P Sbjct: 254 EGLLKQAQDGADFAQLAQASSEGPEAAQGGAMGFREIGRLPALFANAVVDLQPGGVAPQV 313 Query: 261 YVTQKGVEYIAICDKR---------DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + G I + KR ++ + P E + LR Sbjct: 314 IESAAGFHVIKLVAKRAAPASGPAAAGKITQTQVRHILIRTGPNMPEAEARRQLGTLRDR 373 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 56/143 (39%), Gaps = 2/143 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 + + I + ++++ + + +F+ + G Sbjct: 341 KITQTQVRHILIRTGPNMPEAEARRQLGTLRDRITHGGDFADAARRFSQDGSAQNGGDLG 400 Query: 236 YLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNT 293 ++ +L P+F+ + + N + P VTQ GV I + ++R+ + + A+ Sbjct: 401 WVSPGELVPEFEQAMSRLRPNEISEPVVTQFGVHLIQVLNRRETELSPEKQRDFARAEVR 460 Query: 294 PTKIEKHEAEYVKKLRSNAIIHY 316 K+ ++V++LRS A + Y Sbjct: 461 EQKLRAAYDDWVRQLRSQAYVEY 483 >gi|288959403|ref|YP_003449744.1| parvulin-like peptidyl-prolyl isomerase [Azospirillum sp. B510] gi|288911711|dbj|BAI73200.1| parvulin-like peptidyl-prolyl isomerase [Azospirillum sp. B510] Length = 374 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 33/325 (10%), Positives = 84/325 (25%), Gaps = 64/325 (19%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMS---------------SRIRTTINGEVITDGDISK 58 ++ T + + C + + ++ + +NGE + D+++ Sbjct: 65 RVFRTALLSVAACGIALAAHAQTPAPATPAPAAAAAPAAPADPVVARVNGEELHKSDVTR 124 Query: 59 RIALLK---LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 ++ L Q + + +L+ L K+G+ + Sbjct: 125 MVSQLPPQVQQMPIEMIYPAVIDQLVSGKLVSSAGYKAGLADSPEVKDEI---------- 174 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + + + ++ + + ++ +N Sbjct: 175 --------------------KRAEERGVQRAFIQKEIKARVTPEALQKAYQDYLKENPAQ 214 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKA 234 E +L ++ K + ++ + G Sbjct: 215 EEVKAAHIL-----------VEKEEEAKAIIAQLKKGGDFAKLAKEKSKDAAAAAQGGDL 263 Query: 235 QYLLESDLHPQFQNL-LKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292 Y + + F N + P TQ G I + D+R + Q Sbjct: 264 GYFTKDAMVEPFANAAFSMKPGEVSKEPVKTQFGYHIIKVEDRRTQP--QPTLDEVKPQL 321 Query: 293 TPTKIEKHEAEYVKKLRSNAIIHYY 317 T + V++LR A + + Sbjct: 322 EQTLSKDIVTALVEELRGKAKVETF 346 >gi|316931933|ref|YP_004106915.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris DX-1] gi|315599647|gb|ADU42182.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris DX-1] Length = 305 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 36/284 (12%), Positives = 80/284 (28%), Gaps = 47/284 (16%) Query: 36 WAMSSRIRTTINGEVITDGDIS---KRIALLKLQKINGELEKIAVQELIVETLKKQEIEK 92 ++ + +NG I D+ + + Q ++ + LI + + E Sbjct: 37 AEDANPVLAKVNGAEIRQSDVDLAEQELGPSLAQMDPASKKENVLAFLIDMKIVAKAAED 96 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I ++ + + + DV+ + Sbjct: 97 KKIQDSADFKKRL------------------------------DFARNRLLMDDVLAAEG 126 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 + M+ + + +E R +L D ++K Sbjct: 127 KAATTDEAMKKVYEEAAKQISGEQEVHARHILVETEDEAKAVAEELKK-----------G 175 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIA 271 +K + G + + + P+F ++P +Q G I Sbjct: 176 ADFAELAKKKSKDPGASDGGDLGFFTKDQMVPEFSAVAFALEPGKISDPVKSQFGWHIIK 235 Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +KR+ + AQ K +++YV KLR A + Sbjct: 236 VEEKRNRKP--PSFDQVKAQIEQYVARKAQSDYVSKLRQAAKVE 277 >gi|260221806|emb|CBA30735.1| hypothetical protein Csp_C25050 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 728 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 92/296 (31%), Gaps = 18/296 (6%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--------NGELEKIAVQELIVETL 85 + I +N E IT ++S + + Q EL ++ ++ +I + Sbjct: 3 QQALPGDYIVAVVNSEPITFQELSIEVRRVSQQLTQQGQAAPAPEELRRLVLERMINDKA 62 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + Q + GI D+ ++ A G+ L K G+ F+ L Q Sbjct: 63 QLQLAREQGIRMDATAIDRAEQNVASQNGVDVLALRQKLAKDGVTVQSFRDGLRDQLTLS 122 Query: 146 DVVKNDFMLKYGNLEME----IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + + + +++ I + + +E I +L +P+ + Sbjct: 123 RLHEREVESSIKVSDVDVDRAIQEQQANNTDPFAQELNIAQILIVVPEKANGEEAAALYV 182 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260 R R +D L K S + G+ L P F N + + Sbjct: 183 KAQRVLQRARDGEDFTNLVKEFSAADRNNGGQIGLRRGDRLPPSFVNATQGLKVGEIADV 242 Query: 261 YVTQKGVEYIAICDKRDL-----GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 T G + + +++ ++ +N+P + + R Sbjct: 243 VRTGAGFHILKLVERKAPTRLVQTMVQTRARHILLRNSPQLPQAQAIARLADARQQ 298 Score = 42.4 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 17/214 (7%), Positives = 56/214 (26%), Gaps = 7/214 (3%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQE-LI------VETLKKQEIEKSGITFDSNTV 102 ++D D+ + I + + +++ + + LI K+ Sbjct: 134 KVSDVDVDRAIQEQQANNTDPFAQELNIAQILIVVPEKANGEEAAALYVKAQRVLQRARD 193 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 F + + + + + A Q + + + G ++ Sbjct: 194 GEDFTNLVKEFSAADRNNGGQIGLRRGDRLPPSFVNATQGLKVGEIADVVRTGAGFHILK 253 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + K + + + +L + + ++ + K Sbjct: 254 LVERKAPTRLVQTMVQTRARHILLRNSPQLPQAQAIARLADARQQIVSGKTDFASMARKM 313 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + G + P+F+ + + Q+ Sbjct: 314 SQDSSAEQGGDLGWASPGMFVPEFEEAMNRLQDE 347 >gi|323697784|ref|ZP_08109696.1| SurA domain [Desulfovibrio sp. ND132] gi|323457716|gb|EGB13581.1| SurA domain [Desulfovibrio desulfuricans ND132] Length = 323 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 110/319 (34%), Gaps = 24/319 (7%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------- 63 + + + + + I P+ + + RI IN ++T D+ + + + Sbjct: 1 MVKVVSLLLGAMLLICPLTAQAEDVVVDRILVKINDSIVTQYDLDQEMKPVYDQIKDRKL 60 Query: 64 --KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 + Q L + A+ +L+ + L +QEI++ + ++ + L+ E+F Sbjct: 61 TAREQTQLEGLRRQALDKLVNDVLIQQEIKRFSVEVSDENIDKEIERVRTERKLTLEEFQ 120 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 + + G+ F+ L +++ + K + EI + K+ ++ Sbjct: 121 QMVAQDGLSMEEFRSRLKKLLEKQELIGHMVNSKVVVTDSEIQQEYEARKDDYSMGKMVE 180 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + +P + + + + K++ S G L D Sbjct: 181 LAIILLPSEVSPVEVRERITSGEM--------TFAEAVAKYSVGPGKESGGSIGELSWED 232 Query: 242 LHPQFQNL-LKKSQNNTTNPYVTQKGVEYI---AICDKRDLGGEIALKAYLSAQNTPTKI 297 L +QN S + P Q + I + R + ++ + K Sbjct: 233 LADDWQNALKGVSVGGVSTPLTIQNHQALLSPVKINEDRIVPL-EDVRDDIYKDLMQKKR 291 Query: 298 EKHEAEYVKKLRSNAIIHY 316 E +Y KL+ +A+I Y Sbjct: 292 ETVFTDYFNKLKQSAVIIY 310 >gi|52840553|ref|YP_094352.1| peptidyl-prolyl cis-trans isomerase D (SurA) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627664|gb|AAU26405.1| peptidyl-prolyl cis-trans isomerase D (SurA) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 446 Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 93/270 (34%), Gaps = 12/270 (4%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71 + L+ + + + ++ +N VIT +++ ++ L K Q I Sbjct: 18 MFKRIALVCALFSGVCFAEGKQLLDKVVAIVNDNVITSSELNAQVELSKKQIIAQNMQMP 77 Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L K +Q LI L+ Q +++GIT ++ ++ + A + L+ + KQ Sbjct: 78 DESVLRKQVLQHLIDVDLEMQMAKQNGITIENAEIDEAIEKIAASNHLNLSQMRDEITKQ 137 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 GI ++Q + + + V + ++ + I I Sbjct: 138 GISWQEYRQNIRKEMLISRVQQKAVGKDIIVTNEQVEQYLKTSGRIENSNLTYHLKNIVI 197 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHP 244 P ++ +Q+ +AE ++ K + + +S + G ++L Sbjct: 198 PLSEEPTTKQLQRAKIEAENLLNKIKKGEDFSRLAIEESSGEFALEGGDLGERHLAELPE 257 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAIC 273 F + ++ P G I + Sbjct: 258 VFAKEVVHMKVGQVAGPIRAGNGFHLIKLV 287 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 33/277 (11%), Positives = 80/277 (28%), Gaps = 9/277 (3%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 ++T+ + + + + N L +I + + + ++ + Sbjct: 165 DIIVTNEQVEQYLKT-SGRIENSNLTYHLKNIVIPLSEEPTTKQLQRAKIEAENLLNKIK 223 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM-----E 162 + + L+ E+ S +G + +VV G + Sbjct: 224 KGEDFSRLAIEESSGEFALEGGDLGERHLAELPEVFAKEVVHMKVGQVAGPIRAGNGFHL 283 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I +N + + K++ + +++ Sbjct: 284 IKLVAVGGENQRHVITQTHVRHILLKPDASMVPSEAIKQVNNIYRQIQSGKDFALMAKQY 343 Query: 223 A-SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG 280 + V G ++ +L P+F+ + + + P TQ G I + +R Sbjct: 344 SLDAASAVKGGDLGWVNPGELVPEFEKTMNSLPLHKVSKPVKTQYGWHLIEVIARRQKDD 403 Query: 281 EIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A K + K + + + LRS A I+ Sbjct: 404 SEAFKKQQVRQFLQQRKFVEAVQNWQQHLRSQAYINI 440 >gi|168704077|ref|ZP_02736354.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gemmata obscuriglobus UQM 2246] Length = 309 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 33/308 (10%), Positives = 83/308 (26%), Gaps = 15/308 (4%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK-----INGEL 72 L + + A + + T+NGE IT ++ + ++ Sbjct: 5 LALSLTLLAGSTFALAQPPAANPNLAATVNGEQITLAEVDALLKTTLPLTPLTAAQKRQM 64 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + +++ + L +Q + K+G D + G + L Sbjct: 65 RVEVLADMVDDVLLRQFLRKNGPKVD----PAEIDAQLKAFGEKLKAEGKTLADFYRETG 120 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + + +++ K V + VL + Sbjct: 121 QTEAQVKEAWTTAMQLTGYVKSNATEEQLKAYFAANKDHFDRVEVKVRHVVLRAGKSASP 180 Query: 193 QNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQ--YLLESDLHPQFQNL 249 + +++++ + +K + + G Y + F Sbjct: 181 AERAAAKEKLEAIRADIAGGKLDFADAAKKHSHCPSGPAGGDIGVIYRKGGIVDEAFAKA 240 Query: 250 LKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + T G I + +++ K+ + T ++ A+ + KL Sbjct: 241 AFALKPGELSGVVETDFGYHLIQVTERKPGTPTTYDKS--ATDVLDTYSDEFRADLIAKL 298 Query: 309 RSNAIIHY 316 R I Sbjct: 299 RKQGQIQI 306 >gi|311748700|ref|ZP_07722485.1| peptidyl-prolyl cis-trans isomerase (survival protein) [Algoriphagus sp. PR1] gi|311302821|gb|EAZ81480.2| peptidyl-prolyl cis-trans isomerase (survival protein) [Algoriphagus sp. PR1] Length = 458 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 35/328 (10%), Positives = 101/328 (30%), Gaps = 20/328 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 L+ F L ++++++ + S + +I ++ ++ + DI + Sbjct: 1 MKILNRFTLTLLSFWMILPLAAQEAPANGSGQVLDKIVAKVDNNILLESDIQRAYLEALA 60 Query: 66 QKING---ELEKIAVQELIVETLKKQEIEKSGITFD----SNTVNYFFVQHARNTGLSAE 118 Q+ G + L+V L + E + + F + G + E Sbjct: 61 QRQEGVTPPTRCEVFESLMVNKLMVAKAEIDSVVVTDAEVMLQTDQRFNMVLQQFGGNEE 120 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + K + + + + ++ E+ A + ++ + Sbjct: 121 TLAEVYGKTADQIKTEIEDVIKEQLIVQRMRGKITEGLTVSPAEVRAFYNAIPKDSLPLF 180 Query: 179 LIR----TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGK 233 ++ + + +K + ++ ++ G Sbjct: 181 TSEATVGQIVKKPEVSPKIKEEIFEKLRQFKQDILDGKSTFSELATAYSEDPGSRTQGGD 240 Query: 234 AQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292 + +L P+++ Q + P + G+ I + +KR+ ++ Sbjct: 241 LGFFRSGELAPEYEATALALKQGEISEPVESDFGIHLIQLLEKRNGSFNT---RHILMIP 297 Query: 293 TPTKIE-KHEAEYVKKLR---SNAIIHY 316 P++ + K Y+ L+ +N I + Sbjct: 298 KPSEDDLKKAERYLDSLKTEINNGTIEF 325 >gi|255262339|ref|ZP_05341681.1| ppic-type ppiase domain protein [Thalassiobium sp. R2A62] gi|255104674|gb|EET47348.1| ppic-type ppiase domain protein [Thalassiobium sp. R2A62] Length = 281 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 78/307 (25%), Gaps = 52/307 (16%) Query: 13 IKLLTTYFV-LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--- 68 + T + + + + TING IT G + A L Q Sbjct: 1 MSKFTMFLASAASVVTLAAPVLAQDTTADTVVATINGTDITVGHMIITRAQLPQQYQQFP 60 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 L + +LI +TL S L + Sbjct: 61 PDVLFSGILDQLIQQTLL----------------------------------SQSLKNET 86 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + +V+ N ++ + + EY +L Sbjct: 87 DRMMLSLENERRSLRAGEVITNLTGNAVTEEAIQAAYDARFSGAEPETEYNASHILVETL 146 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 + + Q ++ + ++ + G+ + + F+ Sbjct: 147 EEAVAVQAEIEA-----------GADFAEVAAEKSTGPSGPNGGQLGWFGPGMMVAPFEA 195 Query: 249 LL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + + P TQ G I + + R E L + + + + + Sbjct: 196 AVVEMEVGTLSGPVETQFGFHIITLNETRVK--EAPAIETLRPELEAELQQSAIEDKITE 253 Query: 308 LRSNAII 314 LR A I Sbjct: 254 LREAAEI 260 >gi|91204225|emb|CAJ71878.1| similar to peptidyl-prolyl cis-trans isomerase [Candidatus Kuenenia stuttgartiensis] Length = 311 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 94/309 (30%), Gaps = 8/309 (2%) Query: 14 KLLTTYFVLIIFCIVPIVSYK-SWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KING 70 K Y + I+ + + + I +NG+ I D+ KR+ + K + Sbjct: 3 KKAVFYLCAVFLLFPAIICFPENPLLGENIAVVVNGKKIKKDDVDKRLNMFKDADVETYN 62 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + + +++LI + L + I+K GI ++ + + + + +FL Sbjct: 63 AIRQEIIEQLITDILLEDFIDKQGIVVTPMEMSRELLLIKKEIADNEGEADAFLRDMLAS 122 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 ++ F + ++ K K + + + N Sbjct: 123 IGSNLYDFEKTIKHSLALEKYFKGSLDSQNLKRFFEKNKHFFNGEAVRVSHIFIDTKKFN 182 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE---SDLHPQFQ 247 V + I + + +++ G ++ + P Sbjct: 183 SGDMVEKVAQLINTLKSELDKGSDFEELAREYSDCPSASKGGDLGFIQRRGGTYDEPFLS 242 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + P ++ G I + K++ + T +++ +K+ Sbjct: 243 TAFSLRIGKVSEPVKSEYGYHLIKVTGKKEGVA--VNFEDVIDDVRSTMLDEEILGLLKR 300 Query: 308 LRSNAIIHY 316 LRS A I Sbjct: 301 LRSEAKIEI 309 >gi|120599971|ref|YP_964545.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. W3-18-1] gi|146292095|ref|YP_001182519.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella putrefaciens CN-32] gi|120560064|gb|ABM25991.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. W3-18-1] gi|145563785|gb|ABP74720.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella putrefaciens CN-32] gi|319425391|gb|ADV53465.1| outer membrane protein maturation factor, peptidyl-prolyl cis-trans isomerase, SurA [Shewanella putrefaciens 200] Length = 434 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 103/317 (32%), Gaps = 19/317 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +K + + + + R+ IN ++ + +I I +K Sbjct: 1 MKPSKHLIFALFALAISQPTLAAPQPLDRVAVQINDGIVLESEIVSMIGTVKANAKAANQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L ++ LI+ L+ Q ++ G+ ++ AR +S + Sbjct: 61 SLPSDSALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKMSVAQMQQKI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + +G+ + +++ L + ++ + + EI + + ++ +++ + Sbjct: 121 ESEGLSFSQYREQLREEITLGEIQRIQVQRRIQVSPQEISSLVKLIQEQGMKDVEYQIGH 180 Query: 185 FSIPDNKLQNQGFVQ---KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I ++ KR E +S + G Y+ ++ Sbjct: 181 ILIDVPNNPTSEQLEASSKRANIVLERLKNGEDFRRTAIASSSGPKALEGGIWDYMNINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQ----NT 293 + F + L + P + G I I D R E ++ + + Sbjct: 241 MPTLFAEVLSGAKTGDIIGPIKSGAGFHIIKIMDSRGLQTKEIEEVRARHILLKPSPILS 300 Query: 294 PTKIEKHEAEYVKKLRS 310 + + +++K++R+ Sbjct: 301 DDRAKAMLEQFLKQIRA 317 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 34/294 (11%), Positives = 84/294 (28%), Gaps = 27/294 (9%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI---TFDSNTVNYF 105 E IT G+I + ++Q E+ + LI E K + G +N + Sbjct: 136 EEITLGEIQRIQVQRRIQVSPQEISSLVK--LIQEQGMKDVEYQIGHILIDVPNNPTSEQ 193 Query: 106 FVQHARNTGLSAEDFSS--------FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 ++ + E + G + + + + + Sbjct: 194 LEASSKRANIVLERLKNGEDFRRTAIASSSGPKALEGGIWDYMNINEMPTLFAEVLSGAK 253 Query: 158 NLEME-----------IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 ++ I + E + + P L + + + Sbjct: 254 TGDIIGPIKSGAGFHIIKIMDSRGLQTKEIEEVRARHILLKPSPILSDDRAKAMLEQFLK 313 Query: 207 ESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 + R K + +++ G+ + + P+F L + + + P+ T Sbjct: 314 QIRAGEAKFEDLARQYSEDPGSAAKGGELGWADPNIYVPEFAQTLSSLAIDQISEPFRTT 373 Query: 265 KGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + ++R + K + ++ ++RS+A I + Sbjct: 374 HGWHITQLEERRKTDATDQFNSNRAHQLIFRRKFNEELQNWLDEMRSDAYIEVF 427 >gi|299136387|ref|ZP_07029570.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidobacterium sp. MP5ACTX8] gi|298600902|gb|EFI57057.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidobacterium sp. MP5ACTX8] Length = 635 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 91/300 (30%), Gaps = 14/300 (4%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GELEKIAVQE 79 VP + + + +N ++IT + + L + + +++ Sbjct: 65 VPTPITPNGTVVEDVIARVNDQIITRSEYLRSEQQLLQEAQQQSASPADFESRRRDLLRD 124 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 +I E L + ++ GIT D+ T+ RN S E +QG+ FKQ + Sbjct: 125 MIDEQLLLSKGKELGITGDAETIRELDEIRKRNHLDSMEALEKAASQQGVSFEDFKQGIR 184 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 +I VV+ + + A I + V Sbjct: 185 NNAIRQQVVQEEVSRHLNMTHAQEDAYYAAHGKDFEVPEQIHLSEILVTTPDNATDAQVA 244 Query: 200 KRIKDAEESRLRLPK---DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 A++ +L + + + + G L +N + Sbjct: 245 AAQAKADDLEAKLKAGTSFADLAKSSSGGPTAAAGGDLGDFKRGSLGDVLENATFPLPEG 304 Query: 256 NTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 T P T++G + + + + ++ + ++ Y+ K R +A Sbjct: 305 GFTAPIRTRQGFVILRVDKHQAAGIPPLADIEPQVQQAIYLDALQPALRAYLTKARQDAY 364 >gi|85374605|ref|YP_458667.1| peptidyl-prolyl isomerase [Erythrobacter litoralis HTCC2594] gi|84787688|gb|ABC63870.1| peptidyl-prolyl isomerase [Erythrobacter litoralis HTCC2594] Length = 473 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 84/265 (31%), Gaps = 11/265 (4%) Query: 44 TTINGEVITDGDISKRIALLKLQKING-------ELEKIAVQELIVETLKKQEIEKSGIT 96 +NG VIT DI R AL+ + ++ LI ETL+ QE I Sbjct: 84 AVVNGSVITGTDIDHRTALVVASAQGELAEEEMVRVRMQVLRNLIDETLQVQEAAAQEIN 143 Query: 97 FDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 ++ VN + Q A G + ++L G K+ + + W +++ + Sbjct: 144 ITADEVNQRYAQLAAQNFGNQPDAMDAYLLSIGSSPASLKRQIQGELAWQRLLRRNIAPF 203 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 E E+ N + R ++ + + V + + E Sbjct: 204 INVSEEEV--NDLIKRLEESRGTEEYHIMEIYLPATAETRQAVIQNGQQIMEQLRGGASF 261 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICD 274 +F+ + G ++ L + T P G I + D Sbjct: 262 LAYARQFSESSTAATGGDLGFVRLETLPAEMATAAQTMQPGQLTGPVEIPGGFVIIYLRD 321 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEK 299 KR + A LS + E+ Sbjct: 322 KRAVLTADPRDALLSLKQISISFEE 346 Score = 52.4 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 3/79 (3%) Query: 241 DLHPQFQNLL-KKSQNNTTNPYVT-QKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKI 297 DL Q Q + + T P+ + Q+GV + +C + + L ++ +I Sbjct: 394 DLPEQLQGSMLELQVGQATQPFGSLQEGVRVLLLCGRDDPQAADGPSFDVLMSRMEEERI 453 Query: 298 EKHEAEYVKKLRSNAIIHY 316 +K Y++ LR++A I Y Sbjct: 454 QKRARRYLRDLRNDAYIEY 472 >gi|218885391|ref|YP_002434712.1| SurA domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756345|gb|ACL07244.1| SurA domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 320 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 108/327 (33%), Gaps = 24/327 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISK----R 59 + + L F +L ++ + C+ + A ++I +NGE+IT D+ Sbjct: 1 MRSLLRTF-RLAAPVLLVSLACLATVAVVAPRAEQINKIAAVVNGEMITFFDVQAQATPE 59 Query: 60 IALLKLQKINGELEK-------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + L L + N ++ + LI + L QE E+ IT V + + Sbjct: 60 LMRLGLDRNNPAHQEAVRKVHLQVLDSLISDILMNQEAERWKITVQDGEVENELRKFVQR 119 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + LS ++F L +QG+ + + + + ++ K + ++ K+ Sbjct: 120 SQLSQQEFERQLTQQGLSMDVMRDRVRKGILRHRLLTLMIARKIVITQEDVKKYYDAHKS 179 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 V + +R L ++ R + + S G Sbjct: 180 QFVTDRTVRLGLVIFAPTANAEALA--------DKVRTGQTTFEQLAASESIGPNPGSGG 231 Query: 233 KAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLS 289 L +DL P ++ T+ + + + + + + Sbjct: 232 DIGTLKWTDLAPAWKEALDGLKAGETSPVILVEGRKAMLKLVAVTTGRSQTVEEATPEIE 291 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K+++ EY K+L A+I Sbjct: 292 NILREPKLQERFTEYTKQLHDKAVIDI 318 >gi|241765841|ref|ZP_04763778.1| SurA domain protein [Acidovorax delafieldii 2AN] gi|241364240|gb|EER59412.1| SurA domain protein [Acidovorax delafieldii 2AN] Length = 466 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 93/299 (31%), Gaps = 18/299 (6%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIV 82 + + + I +N E +T+ ++ R ++ Q L + ++ LIV Sbjct: 52 GTGSALRSADFIVAVVNSEPVTNNEVRARAVRVEQQMAQQGSPLPPRDLLAREVLERLIV 111 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E ++ Q + GI D V A+ +S ++ L GI F++ L Q Sbjct: 112 EKIQLQLAREGGIRVDDYAVGQAEESVAKQNRVSVDEMHRRLAADGISKERFREELRNQL 171 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMK----NITVREYLIRTVLFSIPDNKLQNQGFV 198 + + + D + ++++ ++ + + L ++ + Q Sbjct: 172 LLLRLRERDVQSRVRVSDLDVDQYLREQQAGADASKLEINLGHILVVVPENATPQQVEER 231 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKKSQ-NN 256 + R + A + +F+ S G F + + Sbjct: 232 RVRAQQAADKVRAGEDFAAVAREFSDAAEAKTSGGLLGLRPADRYPELFVSATAQLPLGG 291 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL----KAYLSAQNTPTKIEKHEAEYVKKLRSN 311 P + G + + DK G ++ + P E A + R Sbjct: 292 IAGPVRSPAGFHVLKLVDKTSAGVPTVAIQSHARHILLRTGPQLTESAAAARLADYRRR 350 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 17/139 (12%), Positives = 42/139 (30%), Gaps = 2/139 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + +L + + + G + Sbjct: 323 HARHILLRTGPQLTESAAAARLADYRRRVLAGQADFAELAREHSQDGSAKQGGDLGWSNP 382 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI-ALKAYLSAQNTPTKI 297 P+F+ + + + P V++ GV I + ++R+ + K+ Sbjct: 383 GRYVPEFEQAMNALKPGDVSEPLVSRFGVHLIQLLERRETKLTQREQRDMARDTVREKKV 442 Query: 298 EKHEAEYVKKLRSNAIIHY 316 E+ A ++++LR A + Y Sbjct: 443 EEAFANWMQELRGRAYVEY 461 >gi|329890123|ref|ZP_08268466.1| PPIC-type PPIASE domain protein [Brevundimonas diminuta ATCC 11568] gi|328845424|gb|EGF94988.1| PPIC-type PPIASE domain protein [Brevundimonas diminuta ATCC 11568] Length = 457 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 110/289 (38%), Gaps = 14/289 (4%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRI-------ALLKLQKINGELEKIAVQELIVETLK 86 + +S I T+N +IT D+ +R+ + ++ G +++ A+ +LI + L+ Sbjct: 62 PQFRLSDGIIATVNDRIITGFDLRQRMLVLMAMTQVQPTEENIGAIQQQALNDLIDQHLQ 121 Query: 87 KQEIEKSGI-TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 E+ K ++ AR G + + +FL++ GI F++ + + W Sbjct: 122 AAELAKFEQLKIGDAEIDQEIADMARQAGTTPASYINFLEQGGISIPAFREQMRTEIGWR 181 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 ++V F + + +I ++M + + ++ Q + + Sbjct: 182 ELVGGRFRDRARVGKSQIEQTMRQMTESATKPQYLIGEIYLEAARVGGMQEAMNGARQLV 241 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 ++ + +F++ G A ++++ + P Q+++ +NP Sbjct: 242 QQMI-QGAPFMAVARQFSAAPSAARGGDAGWVVQGTVQPALQSVMDTLEAGQLSNPIPVD 300 Query: 265 KGVEYIAICDKRDLGGEIALK-AYLSAQNTPTKIE---KHEAEYVKKLR 309 GV + + DKR +K + + E + ++ LR Sbjct: 301 GGVYILYMRDKRSGASTSMVKMKQVMVELPENADEAQVAAATQRLEALR 349 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 35/267 (13%), Positives = 80/267 (29%), Gaps = 10/267 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE--KSGITFDSNTVNYFFVQHA 110 I + + + + LI E + + + +Q A Sbjct: 196 KSQIEQTMRQMTESATKPQY-------LIGEIYLEAARVGGMQEAMNGARQLVQQMIQGA 248 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 ++ + ++ +G Q ++ + + + ++ M Sbjct: 249 PFMAVARQFSAAPSAARGGDAGWVVQGTVQPALQSVMDTLEAGQLSNPIPVDGGVYILYM 308 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 ++ + + +N Q LR C+ + A + Sbjct: 309 RDKRSGASTSMVKMKQVMVELPENADEAQVAAATQRLEALRGQLTCDNILTRARSEPGLL 368 Query: 231 IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 +DL PQFQ + + + + T GV +A+CD+R G + + Sbjct: 369 GADLGESDVADLLPQFQQVARSAEVGSVSTAVRTPLGVHLLAVCDRRLGGPDAPSAQQVE 428 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A+ Y++ LR++A+I Sbjct: 429 ARLQNQNYAMLGRRYLRDLRADALIEI 455 >gi|122070648|sp|Q5ZYR3|SURA_LEGPH RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor Length = 429 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 93/270 (34%), Gaps = 12/270 (4%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71 + L+ + + + ++ +N VIT +++ ++ L K Q I Sbjct: 1 MFKRIALVCALFSGVCFAEGKQLLDKVVAIVNDNVITSSELNAQVELSKKQIIAQNMQMP 60 Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L K +Q LI L+ Q +++GIT ++ ++ + A + L+ + KQ Sbjct: 61 DESVLRKQVLQHLIDVDLEMQMAKQNGITIENAEIDEAIEKIAASNHLNLSQMRDEITKQ 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 GI ++Q + + + V + ++ + I I Sbjct: 121 GISWQEYRQNIRKEMLISRVQQKAVGKDIIVTNEQVEQYLKTSGRIENSNLTYHLKNIVI 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHP 244 P ++ +Q+ +AE ++ K + + +S + G ++L Sbjct: 181 PLSEEPTTKQLQRAKIEAENLLNKIKKGEDFSRLAIEESSGEFALEGGDLGERHLAELPE 240 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAIC 273 F + ++ P G I + Sbjct: 241 VFAKEVVHMKVGQVAGPIRAGNGFHLIKLV 270 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 33/277 (11%), Positives = 80/277 (28%), Gaps = 9/277 (3%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 ++T+ + + + + N L +I + + + ++ + Sbjct: 148 DIIVTNEQVEQYLKT-SGRIENSNLTYHLKNIVIPLSEEPTTKQLQRAKIEAENLLNKIK 206 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM-----E 162 + + L+ E+ S +G + +VV G + Sbjct: 207 KGEDFSRLAIEESSGEFALEGGDLGERHLAELPEVFAKEVVHMKVGQVAGPIRAGNGFHL 266 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I +N + + K++ + +++ Sbjct: 267 IKLVAVGGENQRHVITQTHVRHILLKPDASMVPSEAIKQVNNIYRQIQSGKDFALMAKQY 326 Query: 223 A-SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG 280 + V G ++ +L P+F+ + + + P TQ G I + +R Sbjct: 327 SLDAASAVKGGDLGWVNPGELVPEFEKTMNSLPLHKVSKPVKTQYGWHLIEVIARRQKDD 386 Query: 281 EIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A K + K + + + LRS A I+ Sbjct: 387 SEAFKKQQVRQFLQQRKFVEAVQNWQQHLRSQAYINI 423 >gi|113866541|ref|YP_725030.1| peptidyl-prolyl cis-trans isomerase (rotamase c)protein [Ralstonia eutropha H16] gi|113525317|emb|CAJ91662.1| Peptidyl-prolyl cis-trans isomerase (rotamase c)protein [Ralstonia eutropha H16] Length = 491 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 41/300 (13%), Positives = 91/300 (30%), Gaps = 24/300 (8%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKI--------NGELEKIAVQELIVETLKK 87 + + +N VIT ++ R ++ Q +L ++ L++E ++ Sbjct: 76 SQLVDEVVAVVNNSVITRRELLDRADEIEGQLRAAGRPVPARADLLGEVLERLVMERVQT 135 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 Q +++GI ++ A+ L+A + ++ G+ +++ L Q + Sbjct: 136 QAAQEAGIRVTDQEIDRAIESVAQQNRLNATELRRRVEASGMTWTKYREELRKQVQVIRL 195 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNI----TVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + + K + EI EY + +L +P+N Q Q+ Sbjct: 196 REREVDSKVQVYDGEIDNYLAARGGQGAASGPTEYNVAQILVRVPENASDAQKQAQRAKA 255 Query: 204 DA-EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP-- 260 + + + + G + L F N + Q P Sbjct: 256 EGLLKQAQGGADFAQLAQANSEGPEAAQGGAMGFREIGRLPALFANAVVDLQAGGVAPQV 315 Query: 261 YVTQKGVEYIAICDKR---------DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + G + + KR ++ + P E + LR Sbjct: 316 VESAAGFHVVKLVAKRAAPASSPAAASKITQTQVRHILIRTGPNMPEAEARRQLSTLRDR 375 Score = 107 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 57/143 (39%), Gaps = 2/143 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 + + I + ++++ + + ++F+ + G Sbjct: 343 KITQTQVRHILIRTGPNMPEAEARRQLSTLRDRITHGGDFADAAKRFSQDGSAQNGGDLG 402 Query: 236 YLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNT 293 ++ +L P+F+ + + N + P VTQ GV I + ++R+ + + A+ Sbjct: 403 WVSPGELVPEFEQAMSRLRPNEISEPVVTQFGVHLIQVLNRRETEMSPEKQRDFARAEVR 462 Query: 294 PTKIEKHEAEYVKKLRSNAIIHY 316 K+ ++V++LRS A + Y Sbjct: 463 EQKLRAAYDDWVRQLRSQAYVEY 485 >gi|288573832|ref|ZP_06392189.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569573|gb|EFC91130.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 297 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 82/311 (26%), Gaps = 34/311 (10%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K L + + ++ + I + E +T D + +A + + Sbjct: 1 MKKKNIVLALTLTVALSGAAFAADEKKDEILAKVGPETVTQADFDEVMAGAQPSQAAYFG 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + L+ + G + A + Sbjct: 61 TPEGKRALVEDMADSVLFYLWGKDNKLTETEKYKETMAELEKRVLAGMAM---------- 110 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + E+ K ++ I +K Sbjct: 111 -----------------EKVLSGAKVSDEEVKKFYDDHKAAFEVPESVKASHILIQVSKD 153 Query: 193 QNQGFVQKRIKDAEESRLRLPK----DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 +K K+A + R + + ++ + G + E + P+F+ Sbjct: 154 AGNDLWKKAKKEATKIRKDILAGKVSFEDAAKRDSDCPSKSRGGDLGFFTEGQMVPEFEK 213 Query: 249 LLK-KSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYV 305 + ++P TQ G I + D +D +K + Q K +EYV Sbjct: 214 AAFATKIGDISDPVKTQFGYHIIKVTDHKDASEQPFDEVKDGIRQQLLQQKQRDTLSEYV 273 Query: 306 KKLRSNAIIHY 316 KL+ + Sbjct: 274 DKLKKTYKVEI 284 >gi|317493318|ref|ZP_07951740.1| SurA domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918711|gb|EFV40048.1| SurA domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 432 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 104/317 (32%), Gaps = 18/317 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69 +K T + + FC + V+ + D+ + +KL Sbjct: 1 MKNWRTLILGVAFCANTAFAAPQVVDKVAAVVD--NGVVLESDVDGLMQSVKLNAREAGQ 58 Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L ++ LI++ ++ Q +K GI + V+ A+ +S + S L Sbjct: 59 QLPDDATLRHQILERLIMDNIQLQMAKKMGIDINDADVDRAIGNIAQQNHMSLDQMRSRL 118 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 GI ++ + + + +V N+ + L E+ A +++ + + Sbjct: 119 AADGINYKTYRDQIRKEMLISEVRNNEVRRRVTILPQEVEALAKQVGAQNGADTELNLSH 178 Query: 185 FSIPDNKLQNQGFV---QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I + +Q V +++ + + + +++ + G+ + + Sbjct: 179 ILIALPENPSQQQVDDAEQQARQLVDQLNKGADFGKMAVSYSADSQALKGGQMGWGKIQE 238 Query: 242 LHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTK 296 L F + + P + G + + D R ++ ++ + +P Sbjct: 239 LPSLFAAALQTAKKGDIIGPIRSGVGFHILKVNDLRGGQGNVSVTEVHARHILLRPSPVM 298 Query: 297 IEKHEAEYVKKLRSNAI 313 + ++++ Sbjct: 299 TDDQARAKLQEIAQQIK 315 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 58/168 (34%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + N++V E R +L +Q K + A++ + + Sbjct: 259 IRSGVGFHILKVNDLRGGQGNVSVTEVHARHILLRPSPVMTDDQA-RAKLQEIAQQIKSK 317 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269 + + G + + + P F++ +K + + P + G Sbjct: 318 QITFDEAARAVSQDPGSALKGGDLGWAVPTMYDPAFRDALMKLQKGELSAPVHSSFGWHL 377 Query: 270 IAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R++A + Sbjct: 378 IQLLDTRQVDRTDDAQKDRAYRMLFNRKFAEEAQTWMQEERASAYVKI 425 >gi|307609120|emb|CBW98563.1| hypothetical protein LPW_03901 [Legionella pneumophila 130b] Length = 429 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 93/270 (34%), Gaps = 12/270 (4%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71 + L+ + + + ++ +N VIT +++ ++ L K Q I Sbjct: 1 MFKRIALVCALFSGVCFAEGKQLLDKVVAIVNDNVITSSELNAQVELSKKQIIAQNMQMP 60 Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L K +Q LI L+ Q +++GIT ++ ++ + A + L+ + KQ Sbjct: 61 DESVLRKQVLQHLIDVDLEMQMAKQNGITIENAEIDEAIEKIAASNHLNLSQMRDEITKQ 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 GI ++Q + + + V + ++ + I I Sbjct: 121 GISWQEYRQNIRKEMLISRVQQKAVGKDIIVTNEQVEQYLKTAGRIENSNLTYHLKNIVI 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHP 244 P ++ +Q+ +AE ++ K + + +S + G ++L Sbjct: 181 PLSEEPTTKQLQRAKIEAENLLNKIKKGEDFSRLAIEESSGEFALEGGDLGERHLAELPE 240 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAIC 273 F + ++ P G I + Sbjct: 241 VFAKEVVHMKVGQVAGPIRAGNGFHLIKLV 270 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 33/277 (11%), Positives = 80/277 (28%), Gaps = 9/277 (3%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 ++T+ + + + + N L +I + + + ++ + Sbjct: 148 DIIVTNEQVEQYLKTAG-RIENSNLTYHLKNIVIPLSEEPTTKQLQRAKIEAENLLNKIK 206 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM-----E 162 + + L+ E+ S +G + +VV G + Sbjct: 207 KGEDFSRLAIEESSGEFALEGGDLGERHLAELPEVFAKEVVHMKVGQVAGPIRAGNGFHL 266 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I +N + + K++ + +++ Sbjct: 267 IKLVAVGGENQRHVITQTHVRHILLKPDASMVPSEAIKQVNNIYRQIQSGKDFALMAKQY 326 Query: 223 A-SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG 280 + V G ++ +L P+F+ + + + P TQ G I + +R Sbjct: 327 SLDAASAVKGGDLGWVNPGELVPEFEKTMNSLPLHKVSKPVKTQYGWHLIEVIARRQKDD 386 Query: 281 EIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A K + K + + + LRS A I+ Sbjct: 387 SEAFKKQQVRQFLQQRKFVEAVQNWQQHLRSQAYINI 423 >gi|95930211|ref|ZP_01312949.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfuromonas acetoxidans DSM 684] gi|95133674|gb|EAT15335.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfuromonas acetoxidans DSM 684] Length = 292 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 32/286 (11%), Positives = 88/286 (30%), Gaps = 13/286 (4%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL----------IVETLKKQEIEKS 93 T+NG I+ D + ++ ++++ +E+ I+ + + Sbjct: 6 ITVNGTPISQFDFVNAMQSYSMELYRKTADQLSEEEIEQVQGLAVEQIIARELIFQTALA 65 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 ++ + S E+F + L+K GI + + + L + + Sbjct: 66 QGAIATDEQIKAEMDKVMANFPSEEEFFATLEKAGIDQDSYYRMLRQDLSVKMMTEKKLA 125 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 E+ A + + + +R I + + +K + E Sbjct: 126 DAPSPAAEEVKAFYDENPDKMKKPGQVRASHILIKVTEDNREEAQKKIEELKNEVTGDAA 185 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 + + + ++ G + + +F ++ TQ G I + Sbjct: 186 QFGDLARQHSACPSKDKGGDLGFFGPGSMVKEFDQAAFSLEPGQISDIVETQFGYHLILV 245 Query: 273 CDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +++D + + + K +V++++ A I Sbjct: 246 TERKDPESLTLEEVAPQIESFIKDQKGAILLQAWVEEMKEKADIEI 291 >gi|83952309|ref|ZP_00961041.1| PPIC-type PPIASE domain [Roseovarius nubinhibens ISM] gi|83837315|gb|EAP76612.1| PPIC-type PPIASE domain [Roseovarius nubinhibens ISM] Length = 441 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 47/284 (16%), Positives = 109/284 (38%), Gaps = 10/284 (3%) Query: 6 FTSLSDFIKLLTTYF----VLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRI 60 T ++ +++ +F V ++ + P+ + A S T+N IT +I +R Sbjct: 4 MTEMTKKTRMIAKFFQTSAVALVLGLTPLTAAPVIAQSKFEAVITVNNAPITQFEIEQRA 63 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 L+L + G+ +A ++LI + LK Q +SGI + + + A LS + Sbjct: 64 RFLRLLRAPGDPIALAREQLIEDRLKLQAARQSGIEVNEEQIAAGMDRFASQANLSGAEM 123 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 L +G+ + F+ ++ W D+ + F + E ++ + + E L+ Sbjct: 124 VKLLASEGVYEETFRAFIIAGVSWSDLTRARFAPRVSISEDDLERARAAVGKGGGVEVLM 183 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 ++ + +RI + + ++++ S G+ + + Sbjct: 184 SELIIPYTPQTQEQVEATARRISEGASE----SSFAAEARRYSATRTAPSGGRLPWTPLN 239 Query: 241 DLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 +L + ++ + + T+P Q V + D R+ Sbjct: 240 ELPGGLRGIILGLAPGDVTDPLPLQGAVALFQLRDIRETDVAEP 283 >gi|294084202|ref|YP_003550960.1| SurA domain-containing protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663775|gb|ADE38876.1| SurA domain protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 424 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 36/283 (12%), Positives = 101/283 (35%), Gaps = 9/283 (3%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL-------Q 66 L + I+ + + + + + +I ++G+ IT+ D+ +R+ LK + Sbjct: 5 SLFRIFTTSIMLIGMMALGGLNASANIKIVAKVDGKPITNYDVDQRVLFLKAVTNLPETE 64 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 I ++ K A+Q L+ +TLK Q + ++ +E S+ L + Sbjct: 65 NIEKQIRKDALQMLVDDTLKMQAALSTNPLVQQQANRPATDLIDQSFASDSESGSAALRR 124 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + + K A IW +++ F + ++ +I ++++ + + + + Sbjct: 125 LNLNYDAVKTKFAADLIWSGYLQDKFADIFAEIDGKIDLELERIRADASQPQVNISEIVL 184 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + + ++ + +++++ G+ ++L L + Sbjct: 185 -APEPNRPLAATMALATEMVKAVKKGADFNAIAQQYSAAGTAQQGGRLGWVLLERLPEKL 243 Query: 247 QNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 Q ++ ++P V R G ++ + Sbjct: 244 QAMIAPLDVGGVSDPIQLDGAVYIFKKTGDRKDGANDISQSRI 286 Score = 42.4 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 44/154 (28%), Gaps = 5/154 (3%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 R +L+R VL + ++ ++ E++ Sbjct: 273 DRKDGANDISQSRIWLVRAVLPVNAEATKSDRLEAAAQLGRDVTDINDCDSMVALHEEYG 332 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 S + +L PQ QN + + + + +GV +C + + Sbjct: 333 SG-TAPRLEDL---RLGELAPQMQNLVKELNVGEPSEALSFSEGVASFMVCKRLKPELNL 388 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + Y+ +LR A I + Sbjct: 389 PTRDDIYRVQFNRLFGSLSERYLLRLRRKASIEF 422 >gi|171060558|ref|YP_001792907.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptothrix cholodnii SP-6] gi|170778003|gb|ACB36142.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptothrix cholodnii SP-6] Length = 336 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 40/332 (12%), Positives = 95/332 (28%), Gaps = 18/332 (5%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR- 59 M + TS + ++ ++T + + V +S S +NG I + ++ Sbjct: 1 MNALPVTSATVRLRRVSTGLLTALVMGVASLSSGPALAQSVFAARVNGVGIPAQRLERQF 60 Query: 60 ----------IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 IA L+ EL + A+ LI L Q+ G+ D V + Sbjct: 61 EALLRERQIHIARLQNPARARELRREALDRLIGIELLGQQARALGLEADDAAVERAITEA 120 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 SAE F+ + +G + +++ + + + E +I A + Sbjct: 121 RSRF-RSAEVFAQRIAIEGHDEASHREHTRKLLSGERLAQRIVDREVHITEADIAAFHEA 179 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKI 226 + R +R + + E +R + Sbjct: 180 NPALFRRPEQVRVRQLLVALPADAEPALKAQARSRIEALLVRARAGESFEALARTHSDAP 239 Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL--GGEIA 283 G ++ + + T G + + + ++ Sbjct: 240 TRQWGGALDPFGRGSQPRAIEDAAFALAPGALSEVIETSAGWQILQLDERIAAVSVPLDE 299 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++ + + ++ + +LR + Sbjct: 300 VRERIRRHLHDGRGQQAVEREIARLREQGRVE 331 >gi|78357080|ref|YP_388529.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219485|gb|ABB38834.1| peptidyl-prolyl cis-trans isomerase domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 329 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 106/308 (34%), Gaps = 22/308 (7%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL---------- 72 + V + + + ++I +NGE+IT D+ R A + L Sbjct: 28 VSALAVFVAGAGAETVINKIVAVVNGEIITQYDLQARAASKLHRAGLSALDPADAAAIKK 87 Query: 73 -EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 E ++++IV+ L QE E+ + D V+ ++ + + L +G Sbjct: 88 IESETLEDMIVDRLMVQEAERYNLGADDAAVDNELRSLLARMQITEDQLVAQLKSEGQDL 147 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + ++ + + ++ K +I A ++ KN +++ I L Sbjct: 148 DFYRGLIRNNIMRQKLLSFMVSRKVVVTRQDIEAYYEEHKNEYMQDKSISLSLLVFAPTA 207 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-L 250 + R + ++K++ S G L S L Q++ Sbjct: 208 DPEPVLR--------DIREGNISFADAVKKYSVGPAASSGGAIGKLDWSSLVSQWKQALE 259 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + P Y+ + + + + + + A+ +++ EY +KL Sbjct: 260 GVAAGGLSRPIEYDGRAAYLHVDEVIEGTVRPVDEVADEIEAKLREPMLKERFEEYTRKL 319 Query: 309 RSNAIIHY 316 R A++ Sbjct: 320 RERAVVDI 327 >gi|298504157|gb|ADI82880.1| peptidylprolyl cis-trans isomerase lipoprotein, PpiC-type [Geobacter sulfurreducens KN400] Length = 313 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 97/315 (30%), Gaps = 51/315 (16%) Query: 12 FIKLLTTYFVLIIFCIV-----PIVSYKSWAMSSRIRTTINGEVITDGDISKRIA----L 62 + +L+ L + + ++ +NG+ IT + +K + Sbjct: 6 IVTILSVSLCLAALGGCKGKTESGTTAAPAKKAGQVLVEVNGDAITVENFNKELEGLPPY 65 Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 LK E +K + ++V L Q+ +K G+ + + Sbjct: 66 LKPMADTPEGKKELLDTMVVRELLYQQAKKDGVDKSAEIADRV----------------- 108 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + L + + +K + + E+ + K+ I+ Sbjct: 109 -------------EELKKRVVVEAYLKKKVEEQVQVSDEELKKFYDQNKDKFKSGAQIKA 155 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + D +K ++ + +K + G + + ++ Sbjct: 156 SHILVRD---------EKLAQEIVKELKGGANFEELAKKHSIDSAAAKGGDLGWFSKGNM 206 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEK 299 P+F+ + + T+ TQ G I + KR G +K + A P K ++ Sbjct: 207 VPEFEKVAFGLKEGETSGIVRTQFGYHIIKVTGKRPAGERTFEEVKDQIKAAVLPGKQQE 266 Query: 300 HEAEYVKKLRSNAII 314 + + ++ A I Sbjct: 267 VFQKLKEDIKKGATI 281 >gi|39995127|ref|NP_951078.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Geobacter sulfurreducens PCA] gi|39981889|gb|AAR33351.1| PPIC-type PPIASE domain protein [Geobacter sulfurreducens PCA] Length = 313 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 97/315 (30%), Gaps = 51/315 (16%) Query: 12 FIKLLTTYFVLIIFCIV-----PIVSYKSWAMSSRIRTTINGEVITDGDISKRIA----L 62 + +L+ L + + ++ +NG+ IT + +K + Sbjct: 6 IVTILSVSLCLAALGGCKGKTESGTTAAPAKKAGQVLVEVNGDAITVENFNKELEGLPPY 65 Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 LK E +K + ++V L Q+ +K G+ + + Sbjct: 66 LKPMADTPEGKKELLDTMVVRELLYQQAKKDGVDKSAEIADRV----------------- 108 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + L + + +K + + E+ + K+ I+ Sbjct: 109 -------------EELKKRVVVEAYLKKKVEEQVQVSDEELKKFYDQNKDKFKSGAQIKA 155 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + D +K ++ + +K + G + + ++ Sbjct: 156 SHILVRD---------EKLAQEIVKELKGGANFEELAKKHSIDSAAAKGGDLGWFSKGNM 206 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEK 299 P+F+ + + T+ TQ G I + KR G +K + A P K ++ Sbjct: 207 VPEFEKVAFGLKEGETSGIVRTQFGYHIIKVTGKRPAGERTFEEVKDQIKAAVLPGKQQE 266 Query: 300 HEAEYVKKLRSNAII 314 + + ++ A I Sbjct: 267 VFQKLKEDIKKGATI 281 >gi|226941261|ref|YP_002796335.1| peptidyl-prolyl cis-trans isomerase [Laribacter hongkongensis HLHK9] gi|226716188|gb|ACO75326.1| Probable peptidyl-prolyl cis-trans isomerase [Laribacter hongkongensis HLHK9] Length = 607 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 35/381 (9%), Positives = 96/381 (25%), Gaps = 87/381 (22%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 + + + V + F + SY + A + GE I DI + + Q + Sbjct: 8 NTLVIKIILGAVALTFVGFGVGSYTA-ATDDAYLAKVGGEKIYKQDIERALN---GQPAD 63 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDK 126 + + ++ LI + L + + G+ + N ++ + +L Sbjct: 64 SAVRQQVLESLIRQKLLLADAGQHGMRVTDAELRRVIAGIPAFQDNGHFDSKRYEEYLQS 123 Query: 127 QGIGDNHFKQYLAIQSIWPD---------------------------------VVKNDFM 153 Q + F+ + + + + F+ Sbjct: 124 QYMSAEQFQARIRDELMVQQQLSAFVDATFVSPGAVERVHKLLAEQRQINQYRLTAAQFL 183 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + ++ K +R + +L V + + Sbjct: 184 PGVKVDDADVQRFYDSNKARFQTPEKVRLEYVLLSLEELAKTVQVSEADVRKYYEEHKAE 243 Query: 214 --------------------------------------------KDCNKLEKFASKI-HD 228 + ++ ++ Sbjct: 244 LAGDEQRQVAHILIAVPKGASAADKARLKTEAEAIVKEVRSNPARFAALAQEKSADPGSA 303 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 G + + F++ K ++ ++P T+ G I + + ++A Sbjct: 304 AKGGDLGWFGRGVMVKPFEDSAFKLAKGQVSDPVETEFGYHIIKVEGIK-TPDLSTMQAD 362 Query: 288 LSAQNTPTKIEKHEAEYVKKL 308 + A+ K + ++ L Sbjct: 363 IHARLARQKAGALYRQQLETL 383 >gi|225850985|ref|YP_002731219.1| ppic-type ppiase domain protein [Persephonella marina EX-H1] gi|225646600|gb|ACO04786.1| ppic-type ppiase domain protein [Persephonella marina EX-H1] Length = 325 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 112/317 (35%), Gaps = 13/317 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK----- 67 + + + ++ + +++ + IT+ ++ + + +L Sbjct: 4 VIIFLLGLITSVYAYEGFGWNIDPSTKNKVVAKVGDVEITEMEVQRMMKILLPMNFYHRN 63 Query: 68 ----INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 E+ + A+Q LI L E +K G+ +N Q + S E+ Sbjct: 64 ITEEKLKEIREKAIQNLIYRELLYYEAKKKGLKVTEKEINNLMDQLIKQYK-SKENLEKL 122 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 L + G+ FK+ L + + ++K ++ + +++ K K K +R + Sbjct: 123 LKQTGLTIEGFKKELEKRLLVDKLIKKYAIVSLTDKDLKEYYEKNKDKFKEPASVKVRYI 182 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 + + + + +++ K A + + +++ + + G Y+ + Sbjct: 183 YIKVDPSDPKGREKAREKAKKAYKEIKEGKDFGDVAYRYSDDLSRIKGGDIGYVHKGRFP 242 Query: 244 PQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKH 300 Q + + K + T G+ + I DKR +K L + T E+ Sbjct: 243 KQIEEEIYKLDVGQVSKIIETDTGLHIVKIEDKRPPRLVPYEEIKDKLKKELTEVMQERK 302 Query: 301 EAEYVKKLRSNAIIHYY 317 E +K + N + Y Sbjct: 303 FNELIKDAKKNLKVEIY 319 >gi|254437017|ref|ZP_05050511.1| PPIC-type PPIASE domain protein [Octadecabacter antarcticus 307] gi|198252463|gb|EDY76777.1| PPIC-type PPIASE domain protein [Octadecabacter antarcticus 307] Length = 284 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 78/305 (25%), Gaps = 51/305 (16%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN---G 70 KLL + + + + + ++NG IT G + + L Q Sbjct: 6 KLLASAALFTFSASFAHADAHADITAETVVASVNGSDITLGQLIMLRSQLPEQYQQLPDD 65 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + V +L+ + L ++ VN Sbjct: 66 VVFNGLVDQLVNQQLLGDTLDVEPKRIAIAIVNEV------------------------- 100 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 +VV G+ +++ + + EY +L Sbjct: 101 ---------RSMRAGEVVNTFISAPVGDADLQAAYDARFADVAPDTEYNASHIL------ 145 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250 ++ + + + ++ S G + + P F+ + Sbjct: 146 -----VTTEEEATEIKAMVDDGADFAETAVEKSTGPSGPSGGDLGWFGLGMMVPAFEEAV 200 Query: 251 -KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + P TQ G I + + R+ L + ++ + L Sbjct: 201 LTLDAGEVSAPVETQFGWHIIMLNEARETPS--PTLDDLREELAIDIQQQALDALINSLT 258 Query: 310 SNAII 314 +A I Sbjct: 259 ESADI 263 >gi|54293303|ref|YP_125718.1| hypothetical protein lpl0351 [Legionella pneumophila str. Lens] gi|81679326|sp|Q5WZN0|SURA_LEGPL RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|53753135|emb|CAH14582.1| hypothetical protein lpl0351 [Legionella pneumophila str. Lens] Length = 429 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 93/270 (34%), Gaps = 12/270 (4%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71 + L+ + + + ++ +N VIT +++ ++ L K Q I Sbjct: 1 MFKRIALVCALFSGVCFAEGKQLLDKVVAIVNDNVITSSELNAQVELSKKQIIAQNMQMP 60 Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L K +Q LI L+ Q +++GIT ++ ++ + A + L+ + KQ Sbjct: 61 DESVLRKQVLQHLIDVDLEMQMAKQNGITIENAEIDEAIEKIAASNHLNLSQMRDEITKQ 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 GI ++Q + + + V + ++ + I I Sbjct: 121 GISWQEYRQNIRKEMLISRVQQKAVGKDIIVTNEQVDQYLKTAGRIENSNLTYHLKNIVI 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHP 244 P ++ +Q+ +AE ++ K + + +S + G ++L Sbjct: 181 PLSEEPTTRQLQRAKIEAENLLNKIKKGEDFSRLAIEESSGEFALEGGDLGERHLAELPE 240 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAIC 273 F + ++ P G I + Sbjct: 241 VFAKEVVHMKVGQVAGPIRAGNGFHLIKLV 270 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 33/277 (11%), Positives = 80/277 (28%), Gaps = 9/277 (3%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 ++T+ + + + + N L +I + + + ++ + Sbjct: 148 DIIVTNEQVDQYLKTAG-RIENSNLTYHLKNIVIPLSEEPTTRQLQRAKIEAENLLNKIK 206 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM-----E 162 + + L+ E+ S +G + +VV G + Sbjct: 207 KGEDFSRLAIEESSGEFALEGGDLGERHLAELPEVFAKEVVHMKVGQVAGPIRAGNGFHL 266 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I +N + + K++ + +++ Sbjct: 267 IKLVAVGGENQRHVITQTHVRHILLKPDASMVPSEAIKQVNNIYRQIQSGKDFALMAKQY 326 Query: 223 A-SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG 280 + V G ++ +L P+F+ + + + P TQ G I + +R Sbjct: 327 SLDAASAVKGGDLGWVNPGELVPEFEKTMNSLPLHKVSKPVKTQYGWHLIEVIARRQKDD 386 Query: 281 EIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A K + K + + + LRS A I+ Sbjct: 387 SEAFKKQQVRQFLQQRKFVEAVQNWQQHLRSQAYINI 423 >gi|46580310|ref|YP_011118.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Desulfovibrio vulgaris str. Hildenborough] gi|46449727|gb|AAS96377.1| peptidyl-prolyl cis-trans isomerase domain protein [Desulfovibrio vulgaris str. Hildenborough] Length = 348 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 108/299 (36%), Gaps = 22/299 (7%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI-----------AVQEL 80 + + +RI +NGE+IT D+ + A L+ + + + Sbjct: 56 TGAAADSLNRIAAVVNGEMITYFDVQAQAAPEILRAGLDPVRDADAEPVRRITRNVLDSM 115 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I + L QE E+ IT + V+ + + + + L+ E F L +QG+ + ++ + Sbjct: 116 ISDILISQEAERLKITVQDSEVDNEYRKIVQRSQLAPEQFERQLAQQGLSADLMRERIRR 175 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + ++ K EI + K V +R L P + Sbjct: 176 GILRHRLLGLMIARKVVVTRDEIAKYYEAHKGQFVSGRKVRLGLVIFPPRDDADALAA-- 233 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN 259 + + + + + + + G LL SDL ++++ + + + Sbjct: 234 ------QVKSGAMTFADLAARHSIGPNPQNGGVIGDLLWSDLSMEWRDTLSELKPGDVSR 287 Query: 260 PYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ + + + + G+ + + K+++ EY+ +LRS A+I Sbjct: 288 VFLVEGRKAVLQLVASNEGKGQALDDVAEEIENILREPKMQERLQEYIGQLRSRAVIDI 346 >gi|84684613|ref|ZP_01012514.1| PPIC-type PPIASE domain protein [Maritimibacter alkaliphilus HTCC2654] gi|84667592|gb|EAQ14061.1| PPIC-type PPIASE domain protein [Rhodobacterales bacterium HTCC2654] Length = 300 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 38/327 (11%), Positives = 87/327 (26%), Gaps = 63/327 (19%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS-------------SRIRTTINGEVIT 52 T S L + + + + + T+NGE IT Sbjct: 1 MTHTSTRASLFAATLLSVSLALPSWAQDAAPEAEAETDAAPAMEVTVDTVLATVNGEEIT 60 Query: 53 DGDI---SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 G + +++ Q N L + +LI +T+ Q I++ G + N Sbjct: 61 LGHVVAAKEQLPQQYQQLPNDVLLPGLIDQLIQQTVLSQAIDEVGAGVEVRLENE----- 115 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + + + + ++ + Q Sbjct: 116 -----------------------------RRTLVAAEKIDDVITEAVDEDAIQAAYDAQY 146 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 E+ +L + E+++ ++F++ Sbjct: 147 ADAEPTTEWNASHILV----------ETEAEAADLVEQAKAEDADFAALAKEFSTGPSGP 196 Query: 230 SIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + G+ + + F+ + + + ++P TQ G I + + R+ G + Sbjct: 197 NGGELGWFSAGMMVEPFETAVADMAAGDISDPVQTQFGWHVIKLNETREKGA--PPLEEV 254 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIH 315 E + L A I Sbjct: 255 REDIIGQLQTSAVEEALNALMDGATIE 281 >gi|148258757|ref|YP_001243342.1| putative peptidylprolyl isomerase [Bradyrhizobium sp. BTAi1] gi|146410930|gb|ABQ39436.1| putative Peptidylprolyl isomerase [Bradyrhizobium sp. BTAi1] Length = 274 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 82/294 (27%), Gaps = 47/294 (15%) Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDI---SKRIALLKLQKINGELEKIAVQELIV 82 + + ++ ++ + +NG I D+ + + Q + + LI Sbjct: 1 MSLLVAPARAADDANPVLAKVNGAEIRKSDVTLAEEELGPSLAQMDPATKDDNVLSFLID 60 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 L + E + + + Sbjct: 61 MKLVAKAAEDKKVADSEEFKKRL------------------------------AFTRNRL 90 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + ++ ++ M+ + + +E R +L D + + K Sbjct: 91 LMDSLLASEGKAATTPDAMKKVYEEASKQIGGEQEVHARHILVETEDEAKAVKAELAK-- 148 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPY 261 +K + G + + + P+F N+ ++P Sbjct: 149 ---------GGDFAELAKKKSKDPGASDGGDLGFFTKEQMVPEFANVAFALEPGKISDPV 199 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 TQ G I + +KR+ + +Q K +A+YV KLR A I Sbjct: 200 KTQFGWHIIKVEEKRNRKP--PEFDQVKSQIETYVTRKAQADYVSKLREAAKIE 251 >gi|218777908|ref|YP_002429226.1| SurA domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759292|gb|ACL01758.1| SurA domain protein [Desulfatibacillum alkenivorans AK-01] Length = 330 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 118/319 (36%), Gaps = 18/319 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL--- 72 LT F ++ + + S+ + RI +N +VI ++++++A + + L Sbjct: 10 LTALFSTLLTLMTVVPSFAETELVDRIVAIVNTDVIMLSELNEKMAPILAKIDAAGLPDE 69 Query: 73 ---------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 + + ++ L +QE EK G+ V+ + + +++ L+ E + Sbjct: 70 QREKTIYKYREDILNTMVSSLLVEQESEKLGVKVMEGEVDSYLERFKQSSHLTDEALRAQ 129 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK--QKMKNITVREYLIR 181 L+ GI + F+ + ++ + + K + E+ + + Y +R Sbjct: 130 LEADGISMDLFRNQIHDTILFQKLKTTEVDSKIVITDKEVQDYYNEHIDQYEGKKSYHLR 189 Query: 182 TVLFSIPDNKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 +L P+N + Q V+K + + +E +++ S G + Sbjct: 190 YILLPYPENATEEQKAAVEKTMGEIIAMFKAGESFPALIENVSNEKIGGSGGDLGFFKAG 249 Query: 241 DLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKI 297 DL + + + T P G++ + + + ++ + ++ Sbjct: 250 DLTKDLSEKVKIMKPGDITEPMTVDLGLQIFWLEETEMGEGASLEDVRQEIQDLLYNEEV 309 Query: 298 EKHEAEYVKKLRSNAIIHY 316 + ++V +L N+ + Sbjct: 310 KHKYEKWVSELEDNSYVKI 328 >gi|237809111|ref|YP_002893551.1| SurA domain-containing protein [Tolumonas auensis DSM 9187] gi|237501372|gb|ACQ93965.1| SurA domain protein [Tolumonas auensis DSM 9187] Length = 436 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 29/310 (9%), Positives = 107/310 (34%), Gaps = 19/310 (6%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING------- 70 + + + +P+ + + + +N +V+ ++ + + ++ Sbjct: 9 KWLLAGVLFALPLCTQAAQQSLDNVIAIVNKDVVVQSELDRLMHKVQADAAEQRQTLPPY 68 Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 +L K + LI ++L Q E+ G+ + ++ A LS D + +++G+ Sbjct: 69 HQLHKQILDRLIEDSLILQLAERQGLRIGDSQLDQALASIAAEKRLSVADMQAKAEREGL 128 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 F++ + + + ++ +N + + E+ +++ + + Sbjct: 129 TPAEFRETVRKEMMISEMRRNQLRQRINITDQEVKQLAKQISEQGNKGQRFHIEHILLSL 188 Query: 190 NKLQNQGF---VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + ++G V ++ + + + ++ + G ++ ++ Sbjct: 189 SSDADRGEQQRVAEKARQLLQQLKKGADFHQMAVAESADSKALDGGDWGWMTIEEMPSLM 248 Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQ----NTPTKIE 298 + + + P + G+ I + D + + ++ + + K E Sbjct: 249 AEAISGAHKDQFIGPLRSGAGLHIIHVKDMQGQQAIEMQEVNARHILLKTSVILSDEKAE 308 Query: 299 KHEAEYVKKL 308 + Y++ + Sbjct: 309 QMLKGYLRDI 318 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 30/274 (10%), Positives = 84/274 (30%), Gaps = 9/274 (3%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 ITD ++ + + Q G+ L+ + E+ + + + + A Sbjct: 157 ITDQEVKQLAKQISEQGNKGQ-RFHIEHILLSLSSDADRGEQQRVAEKARQLLQQLKKGA 215 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 ++ + + G + + G L + + Sbjct: 216 DFHQMAVAESADSKALDGGDWGWMTIEEMPSLMAEAISGAHKDQFIGPLRSGAGLHIIHV 275 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR-----LPKDCNKLEKFASK 225 K++ ++ + + + + ++ + + LR EK++ Sbjct: 276 KDMQGQQAIEMQEVNARHILLKTSVILSDEKAEQMLKGYLRDIQSGKASFAKLAEKYSDD 335 Query: 226 I-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD-LGGEI 282 + G+ + P+F+++ K + P+ T G + + +R+ Sbjct: 336 TGSALKGGELGWANPEMYVPEFRDMTKNLPIGQLSQPFKTVHGWHIVQVEGRRNLANTPE 395 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 AL+ + + ++ +LR A I + Sbjct: 396 ALENRAYQLIYNRRFAEEAQTWIDELRDEAFIKF 429 >gi|311233707|gb|ADP86561.1| SurA domain protein [Desulfovibrio vulgaris RCH1] Length = 369 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 108/299 (36%), Gaps = 22/299 (7%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI-----------AVQEL 80 + + +RI +NGE+IT D+ + A L+ + + + Sbjct: 77 TGAAADSLNRIAAVVNGEMITYFDVQAQAAPEILRAGLDPVRDADAEPVRRITRNVLDSM 136 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I + L QE E+ IT + V+ + + + + L+ E F L +QG+ + ++ + Sbjct: 137 ISDILISQEAERLKITVQDSEVDNEYRKIVQRSQLAPEQFERQLAQQGLSADLMRERIRR 196 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + ++ K EI + K V +R L P + Sbjct: 197 GILRHRLLGLMIARKVVVTRDEIAKYYEAHKGQFVSGRKVRLGLVIFPPRDDADALAA-- 254 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN 259 + + + + + + + G LL SDL ++++ + + + Sbjct: 255 ------QVKSGAMTFADLAARHSIGPNPQNGGVIGDLLWSDLSMEWRDTLSELKPGDVSR 308 Query: 260 PYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ + + + + G+ + + K+++ EY+ +LRS A+I Sbjct: 309 VFLVEGRKAVLQLVASNEGKGQALDDVAEEIENILREPKMQERLQEYIGQLRSRAVIDI 367 >gi|54296347|ref|YP_122716.1| hypothetical protein lpp0376 [Legionella pneumophila str. Paris] gi|81679579|sp|Q5X877|SURA_LEGPA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|53750132|emb|CAH11524.1| hypothetical protein lpp0376 [Legionella pneumophila str. Paris] Length = 429 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 93/270 (34%), Gaps = 12/270 (4%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71 + L+ I + + ++ +N VIT +++ ++ L K Q I Sbjct: 1 MFKRIALVCALFSGICFAEGKQLLDKVVAIVNDNVITSSELNAQVELSKKQIIAQNMQMP 60 Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L K +Q LI L+ Q +++GIT ++ ++ + A + L+ + KQ Sbjct: 61 DESVLRKQVLQHLIDVDLEMQMAKQNGITIENAEIDEAIEKIAASNHLNLSQMRDEITKQ 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 GI ++Q + + + V + ++ + I I Sbjct: 121 GISWQEYRQNIRKEMLISRVQQKAVGKDIIVTNEQVEQYLKNAGRIENSNLTYHLKNIVI 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHP 244 P ++ +Q+ +AE ++ K + + +S + G ++L Sbjct: 181 PLSEEPTTKQLQRAKIEAENLLNKIKKGEDFSRLAIEESSGEFALEGGDLGERHLAELPE 240 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAIC 273 F + ++ P G I + Sbjct: 241 VFAKEVVHMKVGQVAGPIRAGNGFHLIKLV 270 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 33/277 (11%), Positives = 80/277 (28%), Gaps = 9/277 (3%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 ++T+ + + + + N L +I + + + ++ + Sbjct: 148 DIIVTNEQVEQYLKNAG-RIENSNLTYHLKNIVIPLSEEPTTKQLQRAKIEAENLLNKIK 206 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM-----E 162 + + L+ E+ S +G + +VV G + Sbjct: 207 KGEDFSRLAIEESSGEFALEGGDLGERHLAELPEVFAKEVVHMKVGQVAGPIRAGNGFHL 266 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I +N + + K++ + +++ Sbjct: 267 IKLVAVGGENQRHVITQTHVRHILLKPDASMVPSEAIKQVNNIYRQIQSGKDFALMAKQY 326 Query: 223 A-SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG 280 + V G ++ +L P+F+ + + + P TQ G I + +R Sbjct: 327 SLDAASAVKGGDLGWVNPGELVPEFEKTMNSLPLHKVSKPVKTQYGWHLIEVIARRQKDD 386 Query: 281 EIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A K + K + + + LRS A I+ Sbjct: 387 SEAFKKQQVRQFLQQRKFVEAVQNWQQHLRSQAYINI 423 >gi|148358511|ref|YP_001249718.1| peptidyl-prolyl cis-trans isomerase SurA [Legionella pneumophila str. Corby] gi|296105860|ref|YP_003617560.1| peptidyl-prolyl cis-trans isomerase SurA [Legionella pneumophila 2300/99 Alcoy] gi|148280284|gb|ABQ54372.1| peptidyl-prolyl cis-trans isomerase D (SurA) [Legionella pneumophila str. Corby] gi|295647761|gb|ADG23608.1| peptidyl-prolyl cis-trans isomerase SurA [Legionella pneumophila 2300/99 Alcoy] Length = 429 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 93/270 (34%), Gaps = 12/270 (4%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71 + L+ I + + ++ +N VIT +++ ++ L K Q I Sbjct: 1 MFKRIALVCALFSGICFAEGKQLLDKVVAIVNDNVITSSELNAQVELSKKQIIAQNMQMP 60 Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L K +Q LI L+ Q +++GIT ++ ++ + A + L+ + KQ Sbjct: 61 DESVLRKQVLQHLIDVDLEMQMAKQNGITIENAEIDEAIEKIAASNHLNLSQMRDEITKQ 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 GI ++Q + + + V + ++ + I I Sbjct: 121 GISWQEYRQNIRKEMLISRVQQKAVGKDIIVTNEQVEQYLKTAGRIENSNLTYHLKNIVI 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHP 244 P ++ +Q+ +AE ++ K + + +S + G ++L Sbjct: 181 PLSEEPTTKQLQRAKIEAENLLNKIKKGEDFSRLAIEESSGEFALEGGDLGERHLAELPE 240 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAIC 273 F + ++ P G I + Sbjct: 241 VFAKEVVHMKVGQVAGPIRAGNGFHLIKLV 270 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 33/277 (11%), Positives = 80/277 (28%), Gaps = 9/277 (3%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 ++T+ + + + + N L +I + + + ++ + Sbjct: 148 DIIVTNEQVEQYLKTAG-RIENSNLTYHLKNIVIPLSEEPTTKQLQRAKIEAENLLNKIK 206 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM-----E 162 + + L+ E+ S +G + +VV G + Sbjct: 207 KGEDFSRLAIEESSGEFALEGGDLGERHLAELPEVFAKEVVHMKVGQVAGPIRAGNGFHL 266 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I +N + + K++ + +++ Sbjct: 267 IKLVAVGGENQRHVITQTHVRHILLKPDASMVPSEAIKQVNNIYRQIQSGKDFALMAKQY 326 Query: 223 A-SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG 280 + V G ++ +L P+F+ + + + P TQ G I + +R Sbjct: 327 SLDAASAVKGGDLGWVNPGELVPEFEKTMNSLPLHKVSKPVKTQYGWHLIEVIARRQKDD 386 Query: 281 EIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A K + K + + + LRS A I+ Sbjct: 387 SEAFKKQQVRQFLQQRKFVEAVQNWQQHLRSQAYINI 423 >gi|291279541|ref|YP_003496376.1| hypothetical protein DEFDS_1151 [Deferribacter desulfuricans SSM1] gi|290754243|dbj|BAI80620.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 314 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 43/317 (13%), Positives = 102/317 (32%), Gaps = 23/317 (7%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----- 70 + F+L IF + + ++ +NG+ I + +++ IA L L+ Sbjct: 5 IILGFLLAIFIVSFAFA------EEKVAAKVNGKAIYESEVNTVIAELLLKNGIAPSSVD 58 Query: 71 -------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 E++K +++LI + Q + N VN + E + Sbjct: 59 FNNPQLVEIKKKILEQLIDREVLAQHSKTFTYKGIENDVNKKLDELKSGFKTDKEYKDAL 118 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 ++ + + + + K E E K K+ V + + Sbjct: 119 QKNNLTETELKEKIKKNILVKKQL--DSYKSKITVSEQEKKDFYNKNKDKFVIKDSVHVK 176 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 + ++ +K I + + +K++ G Y+ + Sbjct: 177 HIVLLTGDKRSDEEAKKLIDKIYSELKKGVNFEDLAKKYSEDGSAKMGGDLGYITRGKVV 236 Query: 244 PQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKH 300 P+F+ + + P+ +Q G + + DK+ +K ++ + K+E Sbjct: 237 PEFEKVAFETEVGKISKPFKSQFGYHILKVVDKKKGKKLSYDEVKDQITKILSDQKLETM 296 Query: 301 EAEYVKKLRSNAIIHYY 317 ++ + I Y Sbjct: 297 IKSNIENWKKQDKIERY 313 >gi|254463317|ref|ZP_05076733.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Rhodobacterales bacterium HTCC2083] gi|206679906|gb|EDZ44393.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Rhodobacteraceae bacterium HTCC2083] Length = 416 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 94/284 (33%), Gaps = 5/284 (1%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + S F + V Y + +N IT+ +I +R+ Sbjct: 1 MDHMKFSFKSFTRTCAHALACGALLTFGSVQYSNAQGLFATAIKVNDRSITNFEIDERVK 60 Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 L L + G+ K+A ++LI + LK + GI+ V+ + A L +F Sbjct: 61 FLGLLRTPGDHRKLAREQLIEDRLKLGAAQSVGISPTQEEVDAGMGEFAGRVNLETAEFI 120 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 ++ G+ ++ F+ ++ W +V+ F + E ++ + L+ Sbjct: 121 KAINAGGVSEDAFRAFVLSGLAWRQLVQAKFGSRITVSEEDVDRLIAASGSGGGIRVLLS 180 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 ++ P ++ +R ++ ++++ G+ +L + Sbjct: 181 EIIMPAPPSQAAAVQERAER----ISQITSTAAFASEARRYSASPSKARSGRLDWLPITQ 236 Query: 242 -LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 P LL + T+P Q + + + Sbjct: 237 LPAPLRPLLLGLAPGEITDPIPLQNAIALFQLRGIEESDVPEPK 280 Score = 43.5 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 3/85 (3%) Query: 233 KAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKG--VEYIAICDKRDLGGEIALKAYLS 289 S++ L K T+ G + + +C + + +A LS Sbjct: 329 DRDSKKPSEIPTDIALELAKMDPGETSTALTRADGQTLVVLMLCGRTPELEQEVDRAELS 388 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAII 314 ++ Y+++LR++A I Sbjct: 389 LGLQNQRLASFSKGYLEELRADARI 413 >gi|15888445|ref|NP_354126.1| hypothetical protein Atu1105 [Agrobacterium tumefaciens str. C58] gi|15156137|gb|AAK86911.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 315 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 77/292 (26%), Positives = 142/292 (48%), Gaps = 7/292 (2%) Query: 28 VPIVSYKSWAMSSRIR-TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLK 86 + +V Y A + +N IT+ DI++R+A LKLQ+ +G L + A ++L+ E LK Sbjct: 23 MAVVPYAGQAFADSTVKIVVNKTPITNDDIARRVAFLKLQRQSGNLNEKAREQLVDEALK 82 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 ++EI + ++ + V+ F + A N + E + L + G+G HFK ++A+Q WP Sbjct: 83 REEIARVKMSVSTQDVDAAFARFAGNNKMKPEQLTKVLAQAGVGAEHFKAFIAVQMSWPR 142 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 +V + + ++ ++ V + + +N KR +AE Sbjct: 143 LVNARYGARGKMSNQDLVTRLKERGEKPVTTEYFLQQVIFVIPEAKRN-AITGKRKAEAE 201 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQK 265 SR R P ++ FA+ + DV+I +L +L ++ + K + TT VT+K Sbjct: 202 ASRKRYPGC-DQAMSFAATMRDVAIKDLGRILAPELPEDWKALVEKTKEGGTTGTRVTEK 260 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH---EAEYVKKLRSNAII 314 GVEY+AIC +R + + A + +++ + E +Y+++LR A I Sbjct: 261 GVEYLAICKQRQVSDDYAAEMVFKSEDLMKAKDGENPNEKKYIEELRKKAQI 312 >gi|300024688|ref|YP_003757299.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hyphomicrobium denitrificans ATCC 51888] gi|299526509|gb|ADJ24978.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hyphomicrobium denitrificans ATCC 51888] Length = 311 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 88/310 (28%), Gaps = 52/310 (16%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---SKRIALLKLQKING 70 ++ T F + + ++ TI+G+ IT+GD+ I Sbjct: 3 RIFPTAFTVAFAVALLGAPGIQAFAQDKVVATIDGKPITEGDLAVAESEIGSDMGTMPGP 62 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + ++ LI L AE QG Sbjct: 63 QKRTSLLEFLID------------------------------NQLFAEAGEKAKLDQGPD 92 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 YL +++ + + + + Q E R +L Sbjct: 93 FETRLAYLKRRALRELYFEKVIKGSVSDADARKIYDDQVKLLKPEEEVSARHIL------ 146 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL 249 +++ K+ + + ++ + G Y + PQF+ + Sbjct: 147 -----VETEEQAKELKAKLDKGADFAQLAKENSKDPGSKDDGGNLGYFGHGQMVPQFEEV 201 Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 + K + + P TQ G + + D R +K ++ K +K Sbjct: 202 VFKLKKGEVSAPVKTQFGWHLVKLEDSRTKQPPAFEIVKDRIAQSLLLQKAQKTA----T 257 Query: 307 KLRSNAIIHY 316 +LR+NA I Sbjct: 258 ELRANAKIEI 267 >gi|221234696|ref|YP_002517132.1| peptidyl-prolyl cis-trans isomerase [Caulobacter crescentus NA1000] gi|220963868|gb|ACL95224.1| peptidyl-prolyl cis-trans isomerase [Caulobacter crescentus NA1000] Length = 449 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 103/285 (36%), Gaps = 16/285 (5%) Query: 39 SSRIRTTINGEVITDGDISKRIALL-------KLQKINGELEKIAVQELIVETLKKQEIE 91 S + +N ++I+ D+ +R+ LL Q+ ++E+ A++ LI E L+ QE++ Sbjct: 54 SESVAAVVNDDIISSYDLMQRMRLLMATSGMQPTQENLPQIEQEALRSLIDERLQMQELK 113 Query: 92 KSGITFD------SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + V A++ L E L QGIG + ++ L +S W Sbjct: 114 RVEKQQKITIISTDKEVEEQIGDIAQSNRLQPEQLKQQLVAQGIGLDTWRAQLRAESSWQ 173 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 ++ + + E +I A ++++ + + + +F Sbjct: 174 SWIQGRYGSRLRIGEDQIKAYQRRLADAAAKPQYQISEVFLDAARVGG-MEVAVNGATQL 232 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQ 264 + +F+ + G+ ++ + ++ + L + + P + Sbjct: 233 INQMQQGAPFAAVARQFSGSATAANGGEVGWVSQGEMPTEVDAALEQLRPGQLSRPIQVK 292 Query: 265 KGVEYIAICDKRDLGGEIALK-AYLSAQNTPTKIEKHEAEYVKKL 308 GV I + DKR + ++A E A K+L Sbjct: 293 DGVYIIYLRDKRAGSKTAIVDLKQVAAPLAADATEAQIAAATKQL 337 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 2/125 (1%) Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + + K + + ++ LE A+K+ + G +DL P FQ Sbjct: 324 DATEAQIAAATKQLVDLKPKITSC-QSLEATAAKVDGLVAGDLGEAEITDLAPAFQEAAN 382 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 K ++P T G+ IA+C KR G + + ++ Y++ LR+ Sbjct: 383 KLEVGQISDPIRTDAGLHLIAVCGKRQGGANAPTHDQIENRLRGQQLALIAKRYLRDLRN 442 Query: 311 NAIIH 315 A I Sbjct: 443 QATIE 447 >gi|332970909|gb|EGK09885.1| peptidyl-prolyl cis-trans isomerase [Psychrobacter sp. 1501(2011)] Length = 487 Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 22/173 (12%), Positives = 64/173 (36%), Gaps = 3/173 (1%) Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + ++I K N + + + ++ + +++I D E Sbjct: 314 IGQVTEPQITPEGIDIVKLVDKHTNDNMIIPQWKVRHILVKTDERNSDALAEQKINDLYE 373 Query: 208 SRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQK 265 R + ++ G ++ E + P+F+ ++K++ + + P+ +Q Sbjct: 374 QLRRDADFASLAATYSDDPGSAGRGGDLDWVAEGQMVPEFEEMMKRTPEGDYSTPFKSQF 433 Query: 266 GVEYIAICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + + R +K L + + +++++LR+NA + + Sbjct: 434 GWHILKVEGVRQKDVSDTVKRNLAREALYQRLAPQAQEDWLQELRANAYVEVF 486 Score = 92.4 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 105/310 (33%), Gaps = 29/310 (9%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--------NGELEKIAVQELIVET 84 + ++ I +N I +++ +A + + L+ + LI+ Sbjct: 71 ISTRESTNGIIAIVNDTPILKSELASAVATAQARIQASGQPAPSPQRLQNDVLNGLILRE 130 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSSFLDKQGIGDNHFKQYLAIQS 142 L+ ++++GI D N VN + A++ GL E + KQ + + + Sbjct: 131 LQLDMVKRAGIRPDENAVNQSLGRLAQSQGLKSLTELQQALDAKQPGRYAAVRAQVIEEE 190 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR- 201 + ++ + + ++ A + ++ RT+ +P + N+ ++ Sbjct: 191 SLKALQQSQVARRVRITDHDVDAFLASPEAQKLQSTEYRTIHIRVPFSDDYNRITDSEKK 250 Query: 202 -----IKDAEESRLRLPKDCNKLEKFASKIHDV-----SIGKAQYLLESDLH-PQFQNLL 250 + A+E L + ++ G + + L + + Sbjct: 251 AAMQIAQQAQELLKSSDDADMVLSQLSAGTAKNYIAPVQGGDMGFHPAAGLPIDIAKQIT 310 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-------TPTKIEKHEAE 303 T P +T +G++ + + DK I + + + E+ + Sbjct: 311 PLEIGQVTEPQITPEGIDIVKLVDKHTNDNMIIPQWKVRHILVKTDERNSDALAEQKIND 370 Query: 304 YVKKLRSNAI 313 ++LR +A Sbjct: 371 LYEQLRRDAD 380 >gi|163792785|ref|ZP_02186762.1| hypothetical protein BAL199_18098 [alpha proteobacterium BAL199] gi|159182490|gb|EDP66999.1| hypothetical protein BAL199_18098 [alpha proteobacterium BAL199] Length = 329 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 29/278 (10%), Positives = 65/278 (23%), Gaps = 42/278 (15%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 + + +T D+ L Q L+ T Sbjct: 81 VVAKVGDGEVTLADLIAMREDLPPQYRQMPLQ---------------------------T 113 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 + ++ A + L A + + + Q + + + + Sbjct: 114 IYPALLERAIDGRLIANTARAADLAKREDVARRIRRAEDQVLSQVYLTETIAAQVTEDAL 173 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + E +L D + K ++ Sbjct: 174 RERYKTFAAEQSGREEAHASHILLDTEDQAKAVIADLDK-----------GGDFAALAKE 222 Query: 222 FASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLG 279 ++ G + + P+F Q + + P +Q G I + +KR Sbjct: 223 RSTDPAGAEGGDLGWFSAEQMVPEFSQAAFALTPGTYSKEPVKSQFGWHVIKLVEKR--T 280 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 E + Q + + LR+ I + Sbjct: 281 TEAPAFEQVRDQLASELSRELITAKLDTLRAGVKIERF 318 >gi|163855066|ref|YP_001629364.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella petrii DSM 12804] gi|163258794|emb|CAP41093.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella petrii] Length = 516 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 33/348 (9%), Positives = 90/348 (25%), Gaps = 62/348 (17%) Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEKIAV 77 P + + I +N +VIT ++ A L + + Sbjct: 45 ATAPQPAPQGEQFVDGIAAVVNKDVITLREVESGAARATEDLKHRGIQVPPPDVLRRQVL 104 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 Q LI+E L+KQE ++ GI + ++ A + + ++K G+ ++Q Sbjct: 105 QSLIMERLQKQEADRLGIRVNDAQIDQAIETIAGRNRIPVAQMRAEIEKSGVTWAQYRQS 164 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI-----------------------T 174 L + + + E+ A + + Sbjct: 165 LGNDIRMNRLRQRAVDSNIIITDAEVDAFLKDRAHNPAAGTGFSGQPAGQRAPQPTQSGP 224 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 + L + ++ ++K+ + + N + + G Sbjct: 225 EQVALAQILVRVPEGASSSEVARLRKKAEGLLAQLQQGGDFANLAASSSDGPEALQGGVM 284 Query: 235 QYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK------------------ 275 F + + + + G + + D+ Sbjct: 285 GARPLDGWPDLFIKAIASLQPGQVSGLIQSGNGFHILKVLDRAGGNRPAPAQAAAPQPPV 344 Query: 276 ------------RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + ++ + + + + ++++R Sbjct: 345 APQPGAGMPAHQGPVQVTQTHARHILIKTSAVMSDDQARQRLEQIRQR 392 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 13/137 (9%), Positives = 45/137 (32%), Gaps = 2/137 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + + + Q+ + + + +++ + G ++ Sbjct: 365 HARHILIKTSAVMSDDQARQRLEQIRQRIVNGGASFADMARQYSQDANAPQGGDLGWVNP 424 Query: 240 SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKI 297 ++ P F+ + + P ++ G I + ++R+ + + + Sbjct: 425 GEMVPSFEQAMNALPVGGVSQPVLSPFGWHLIQVEERREHDVSDELQRMQARQILFERRA 484 Query: 298 EKHEAEYVKKLRSNAII 314 E +++ +LR+ A I Sbjct: 485 EPAFEDWLAQLRNEAYI 501 >gi|120602308|ref|YP_966708.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio vulgaris DP4] gi|120562537|gb|ABM28281.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio vulgaris DP4] Length = 343 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 108/299 (36%), Gaps = 22/299 (7%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI-----------AVQEL 80 + + +RI +NGE+IT D+ + A L+ + + + Sbjct: 51 TGAAADSLNRIAAVVNGEMITYFDVQAQAAPEILRAGLDPVRDADAEPVRRITRNVLDSM 110 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I + L QE E+ IT + V+ + + + + L+ E F L +QG+ + ++ + Sbjct: 111 ISDILISQEAERLKITVQDSEVDNEYRKIVQRSQLAPEQFERQLAQQGLSADLMRERIRR 170 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + ++ K EI + K V +R L P + Sbjct: 171 GILRHRLLGLMIARKVVVTRDEIAKYYEAHKGQFVSGRKVRLGLVIFPPRDDADALAA-- 228 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN 259 + + + + + + + G LL SDL ++++ + + + Sbjct: 229 ------QVKSGAMTFADLAARHSIGPNPQNGGVIGDLLWSDLSMEWRDTLSELKPGDVSR 282 Query: 260 PYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ + + + + G+ + + K+++ EY+ +LRS A+I Sbjct: 283 VFLVEGRKAVLQLVASNEGKGQALDDVAEEIENILREPKMQERLQEYIGQLRSRAVIDI 341 >gi|91776233|ref|YP_545989.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacillus flagellatus KT] gi|91710220|gb|ABE50148.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacillus flagellatus KT] Length = 272 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 96/308 (31%), Gaps = 50/308 (16%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI--TDGDISKRIALLKLQKING 70 +KL T+ + + ++ A ++ T+NG+ I + D + A + Q ++ Sbjct: 1 MKLTTSALIATV--AFGMLQPAFAAGTNGSVATVNGKPIKQSLYDYIAKEASSRGQTVDD 58 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 ++ + + +LI L QE +++G+ + + Sbjct: 59 NVKNVIINKLIGSELIYQEAQRTGLDKQPDYLAKE------------------------- 93 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + + + +++ + A ++ + + +EY R +L Sbjct: 94 -----ELTRRELLVNTFLQDYIKKNPVSEADIKLAYEKYKQELGDKEYSARHIL------ 142 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF--Q 247 + KD + ++ + G + + + F Sbjct: 143 -----VSTEAEAKDIIAQLGKGGDFAKLAKEKSKDPGSQEKGGDLGWFSAAGMVKPFSDA 197 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + TT P TQ G I + D R + +++ + + Sbjct: 198 VVKLQKGKYTTTPVQTQFGWHVIKLEDTRATQP--PSYDDVKDGLQKQLQQRNLEKLLTD 255 Query: 308 LRSNAIIH 315 LRS A I Sbjct: 256 LRSKAKIE 263 >gi|298528166|ref|ZP_07015570.1| SurA domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298511818|gb|EFI35720.1| SurA domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 326 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 100/297 (33%), Gaps = 22/297 (7%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-----------KINGELEKIAVQELIV 82 + +RI +NGE IT D+ KR+ + E + ++++I Sbjct: 36 AEASSVNRIVAHVNGESITLFDLEKRVEMFLGLFEDISLDELPPVQQEETRRHVLEQMIN 95 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + L +QE E+ I + + + +N ++ E+F L QG+ +K + Sbjct: 96 DILMRQEAERYQIEVRNREIQEHIERVKQNNNMNQEEFEQHLRAQGLSLEDYKDQIRDSM 155 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + V+ K I + +E + + +P + + + Sbjct: 156 LRQRVMNIMVQRKTVVTSDRIKEYYEDNIQDFKKERKVHLKVLVVPRVEEAETLLDKIKE 215 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPY 261 + + E ++ G + + P+++ + P+ Sbjct: 216 GEY--------QFAEAAENYSQGPGASEGGDIGMVRWDRMRPEWREALKNMEAGEISEPF 267 Query: 262 VTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 Q + + + D G ++ + + +EK EY++ LR A+I Sbjct: 268 AMQGQGVLLRVEEIHDEGAVPLEEVEEEIRDELFDKMLEKRFDEYIQGLRDRAVIDI 324 >gi|84516316|ref|ZP_01003676.1| PPIC-type PPIASE domain [Loktanella vestfoldensis SKA53] gi|84510012|gb|EAQ06469.1| PPIC-type PPIASE domain [Loktanella vestfoldensis SKA53] Length = 415 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 101/268 (37%), Gaps = 4/268 (1%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 ++ + + + T+N VIT ++++RI LL++ G++ + A LI Sbjct: 19 AVLALALGLGQPATAQNQFAPAITVNERVITQYELTQRIRLLEVFGTRGDIAQAARDALI 78 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + LK+QEI++ G+ +N + A + F++ L + G+ + +++I Sbjct: 79 ADRLKQQEIDRVGLQVPPEAINAALDEFAGRADMDLAQFNAMLAQNGVDAVTLRDFVSIG 138 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 W + V+ F + + +I + ++ T ++ + + Sbjct: 139 VTWREYVRARFNREVTVTDADIARAQGQIGRATSEMEVLLNEIIIAAP---PEMADRAAQ 195 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNP 260 D + ++ G+ +L ++ PQ Q+L+ T P Sbjct: 196 AADQIAQMRSFADFEAAARQVSALPSRDQGGQLDWLPIANYPPQLQSLILDLDTGEVTEP 255 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYL 288 + G+ + KR+ A A + Sbjct: 256 IMIPNGIALFQMRGKREALRPAAAPASI 283 Score = 37.7 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 2/64 (3%) Query: 253 SQNNTTNPYVTQKG--VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 N + G + ++ +C + G L Q ++ V+ LR+ Sbjct: 349 DPNEVSTNLTRDNGQTLVFLMLCQRNAAGAAETDPDALRNQIRGQRLTTLADALVEDLRA 408 Query: 311 NAII 314 A+I Sbjct: 409 QAVI 412 >gi|332283295|ref|YP_004415206.1| survival protein [Pusillimonas sp. T7-7] gi|330427248|gb|AEC18582.1| survival protein [Pusillimonas sp. T7-7] Length = 489 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 35/334 (10%), Positives = 87/334 (26%), Gaps = 51/334 (15%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQEL 80 S I +N +VIT ++K L + Q L+K +Q + Sbjct: 35 SAPQQASQQFVDGIAAVVNKQVITLQQVNKEARLAQEQLQRQNIPVPDYAVLQKQVLQRM 94 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I+E L++QE E+ GI V+ A ++ + + ++K G + + Q L Sbjct: 95 IMEELERQEAERLGIKVSDAQVSQAVQTIAERNRITPKQLRAEIEKTGGKWDDYLQGLRQ 154 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-----------------RTV 183 + + + + E+ A + + + Sbjct: 155 EVRTDLLRQRTVDSTIVISDAEVDAFLKSQGQSAPASAPTAPEPAARPAGPQILGLAQIL 214 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 + ++ + +D + + + G+ Sbjct: 215 VAVPEGASSAQVQALRLKAEDLLKQVQGGADFGGVAAASSDGPQALDGGELGVRPVEGWP 274 Query: 244 PQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG----------------------- 279 F + + + G + + + Sbjct: 275 DLFIKATQNLQAGQVSGIVQSGNGFHILKVLTRGQPQSQAGSPSAPPTTAQQPAPMQQGP 334 Query: 280 --GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ + T ++ + + +LR Sbjct: 335 MMVTQTHARHILIKTTQVMSDEKASNRLAQLRQR 368 Score = 99.0 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 44/138 (31%), Gaps = 2/138 (1%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 I ++ + R+ + + ++++ G +L Sbjct: 339 QTHARHILIKTTQVMSDEKASNRLAQLRQRLENGESFEDLAKRYSDDATAPQGGDLGWLT 398 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTK 296 + P FQ + N + P +Q G I + ++R E + + Sbjct: 399 PGETVPAFQRAMDALQPNQISQPIQSQFGWHLIQVLERRTKNMENEFRRMQARQLLFQRR 458 Query: 297 IEKHEAEYVKKLRSNAII 314 +E +++ +LR A I Sbjct: 459 VEPAFEDWLSQLRGEAYI 476 >gi|119385325|ref|YP_916381.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paracoccus denitrificans PD1222] gi|119375092|gb|ABL70685.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paracoccus denitrificans PD1222] Length = 279 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 28/303 (9%), Positives = 73/303 (24%), Gaps = 44/303 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 +L + + + + A + + T+NGE IT G + L Q G + Sbjct: 1 MLKPLLAVSVLLSAAVPALPVLAQDADTVVATVNGEAITLGQMVAMRQGLDAQATQGLPD 60 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++ + +++ + ++ Sbjct: 61 SALWDLMLDQMIRQTAVAQAAEPLSKRDAVAL---------------------------- 92 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + + K E + K + + Sbjct: 93 -------EIEKRAYLAGSVLEKIAAAEPDEAELKAAYDQAFGGQAEPAVEYNAAHILVKT 145 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252 + + E+ ++ + G + + F + + Sbjct: 146 REEAEAIA-----KQLAEGADFGALAEEKSTDNSGPNKGDLGWFQPEQMVEPFAEAVKAL 200 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + P TQ G I + D R++ + Q ++K + A Sbjct: 201 EKGQVSEPVETQFGWHVIKLNDTREVTP--PAFEEIKEQLAVQVRRDKVQAEIEKRVTEA 258 Query: 313 IIH 315 + Sbjct: 259 KVE 261 >gi|259417083|ref|ZP_05741002.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Silicibacter sp. TrichCH4B] gi|259345989|gb|EEW57803.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Silicibacter sp. TrichCH4B] Length = 283 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 34/284 (11%), Positives = 89/284 (31%), Gaps = 50/284 (17%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKIAVQELIVETLKKQEIE 91 + ++ + +NGE IT G++ A L Q + L K + +LI +T+ KQ++ Sbjct: 25 AELNANTVVAKVNGEEITVGNMIVARAKLPAQYQSLPDDLLFKALLDQLIQQTVLKQQLH 84 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 ++ + DV+++ Sbjct: 85 GDTPE---------------------------------YVRLSVEHEERSLLASDVIESV 111 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + + + E+ +L ++ + + + Sbjct: 112 MEDAQTEDAIRDAYDARYSSDDGGDEFNASHILLESEEDAVSIKEQLDA----------- 160 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYI 270 ++ ++ + G+ + + P+F+ + + + P TQ G I Sbjct: 161 GADFAALAKESSTGPSGPNGGELGWFENGRMVPEFEAAVAEMRPGEVSEPVQTQFGWHII 220 Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + D+R E + + ++ + + +L ++A I Sbjct: 221 KLNDRR--KLEAPDYEDVREEIGLELAQQAVEDRINQLTASATI 262 >gi|331006695|ref|ZP_08329972.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) [gamma proteobacterium IMCC1989] gi|330419503|gb|EGG93892.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) [gamma proteobacterium IMCC1989] Length = 432 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 109/303 (35%), Gaps = 13/303 (4%) Query: 22 LIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISKRIALLKLQKI-------NGEL 72 + + VP+++ ++ A I + ++I ++ ++I K++ L Sbjct: 17 IGLLTCVPLIALQAQANENIDGIIAIVKDDIIFAQELEQKIHQAKIRLQARNQKTDEKRL 76 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+E L+ +++ + ++ Q + F +L Q + Sbjct: 77 QSQLLDALILEKLQLSLAKQNNLVATDAEIDNSIAQTKAQLQSNGASFDDYLAAQNLSQT 136 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + V + + + E+ + + + +P Sbjct: 137 QARKEIEKEVLISKVQQAVISQRINITDTEVDNYLESKEGQEWLTPRLHLGQIFLPYTAK 196 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLK 251 Q +QK K + R + ++F+ + G + DL P F + + K Sbjct: 197 NKQQTMQKAQKIYRDVSKRTNEFGVFAQRFSQGPNAEKGGDIGIQRKEDLPPLFVERVDK 256 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTKIEKHEAEYVKKL 308 + T P+ + GV +A+ D++ I + ++ + T E+ + + +L Sbjct: 257 LAVGEITQPFFSDAGVHILALFDRQGAEPVIVTQYKVRHILVKPTDLFTEEEAQKKINEL 316 Query: 309 RSN 311 R Sbjct: 317 REK 319 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 85/272 (31%), Gaps = 9/272 (3%) Query: 51 ITDGDISKRIALLKLQK---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 ITD ++ + + Q+ L +I + + + + S N F V Sbjct: 162 ITDTEVDNYLESKEGQEWLTPRLHLGQIFLPYTAKNKQQTMQKAQKIYRDVSKRTNEFGV 221 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 R + + + Q D + + + F G I A Sbjct: 222 FAQRFSQGPNAEKGGDIGIQRKEDLPPLFVERVDKLAVGEITQPFFSDAGVH---ILALF 278 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI- 226 + V + + L + QK+I + E ++ ++++ I Sbjct: 279 DRQGAEPVIVTQYKVRHILVKPTDLFTEEEAQKKINELREKIIQGASFATIAQEYSDDIG 338 Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 + G + P F+ ++ + N + P+ + G + + +R +K Sbjct: 339 SKLDGGDVGWSSPGVFVPAFEKAMQTTAINTISQPFKSTFGWHILTVEGQRSKDIFDTVK 398 Query: 286 A-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + ++K+LR ++ + Sbjct: 399 RSQVRNIIGQQRFQDELTIWLKELRESSYVEI 430 >gi|156935427|ref|YP_001439343.1| peptidyl-prolyl cis-trans isomerase SurA [Cronobacter sakazakii ATCC BAA-894] gi|156533681|gb|ABU78507.1| hypothetical protein ESA_03285 [Cronobacter sakazakii ATCC BAA-894] Length = 428 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 111/311 (35%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ +V S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGITLVVNTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNANQAGQQLPDDSTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQILERLIMDQIMLQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDN 190 ++ + + I +V N+ + L E+ + +N E + +L +P+N Sbjct: 127 TYRAQIRKEMIISEVRNNEVRRRVTILPQEVETLAEQVGNQNDASTELNLSHILIPLPEN 186 Query: 191 KLQNQG-FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 +Q + + + + +++ + G+ + +L F Sbjct: 187 PTADQVSEAEAQARSIIDQARNGGDFGKLAITYSADQQALKGGQMGWGRIQELPSVFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G I + D R + ++ + +P ++ + Sbjct: 247 LSTAKKGDVIGPIRSGVGFHIIKVNDLRGQSQTVSVTEVHARHILLKPSPIMTDQQARQK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEEI--AADIK 315 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 83/273 (30%), Gaps = 16/273 (5%) Query: 58 KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 + + L Q N + L + E + ++ + ARN G Sbjct: 155 QEVETLAEQVGNQNDASTELN-LSHILIPLPENPTADQVSEAEAQARSIIDQARNGGDFG 213 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------FMLKYGNLEMEIPAN 166 + ++ Q + IQ + + G +++ Sbjct: 214 KLAITYSADQQALKGGQMGWGRIQELPSVFAQALSTAKKGDVIGPIRSGVGFHIIKVNDL 273 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + + + ++V E R +L +Q QK + A + + +F+ Sbjct: 274 RGQSQTVSVTEVHARHILLKPSPIMT-DQQARQKLEEIAADIKSGKTTFAQAAREFSQDP 332 Query: 227 -HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEIA 283 G + P F++ L S+ + P + G I + D R + A Sbjct: 333 GSANQGGDLGWAAADVYDPAFRDALMSLSKGQMSTPVHSSFGWHLIELLDTRKSDRTDAA 392 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K K + A ++++ R++A + Sbjct: 393 QKDRAYRMLFNRKFSEEAATWMQEQRASAYVKI 425 >gi|118588533|ref|ZP_01545942.1| hypothetical protein SIAM614_24667 [Stappia aggregata IAM 12614] gi|118439239|gb|EAV45871.1| hypothetical protein SIAM614_24667 [Stappia aggregata IAM 12614] Length = 296 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 31/291 (10%), Positives = 77/291 (26%), Gaps = 48/291 (16%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---NGELEKIAVQELIVETLKK 87 + S A + + IT+ D++ L + + K+ + ++ L Sbjct: 19 STVLSAAEPDDVVAKVGDTEITEADLAFAAQDLGKELQRFPPAQWRKLLLDVMVDMELMA 78 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + G+ D + +L ++++ Sbjct: 79 HAAREEGLDKDPDFQRQL------------------------------DFLKLRALRNAY 108 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + + E++ +K+ E R +L + Sbjct: 109 LAQKIDGEVTDEEVQAAYDKEFADFEGAEEINARHILVKDKAEAEAIIAELD-------- 160 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT--NPYVTQK 265 + ++ + G Y + + P F+ + T P TQ Sbjct: 161 ---GGADFAELAREKSTGPSGPNGGSLGYFAKGQMVPPFEAAAFALEPGTYTKEPVETQF 217 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + DKR E ++ + + + +L+ + Sbjct: 218 GWHVIKLEDKRRQ--EKPAFEEVANGLRQQLMRERYDARMAELKDQVAVEI 266 >gi|148653552|ref|YP_001280645.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter sp. PRwf-1] gi|148572636|gb|ABQ94695.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter sp. PRwf-1] Length = 460 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 37/285 (12%), Positives = 92/285 (32%), Gaps = 14/285 (4%) Query: 47 NGEVITDGDISKRIALLKLQKINGELEKIAVQEL--------IVETLKKQEIEKSGITFD 98 N IT+ DI +A + Q++ + + I E+ K+ ++ + + Sbjct: 175 NRVRITEQDIDAFLASPEAQRLQSAEYRTIHIRIPFSDDYNRITESEKQTALQIAQQAKN 234 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV---VKNDFMLK 155 + G H L V + Sbjct: 235 LLMNTDDAQSVLDELSAGIAKNYVAPVQGGDMGYHEASGLPTDIAKQITPLNVGQVTEPQ 294 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 +++ K N + + I ++ + +++I D E Sbjct: 295 ITPEGIDVVKLVDKRNNDNMIIPQWKVRHILIKTDEQNSDALAEQKINDLYEQLRHDADF 354 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAIC 273 +++ G ++ E + P+F+ ++K++ + + P+ +Q G + + Sbjct: 355 SALASTYSNDPGSAGRGGDLDWVAEGQMVPEFEEMMKRTPKGDYSIPFKSQFGWHILKVE 414 Query: 274 DKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 D R+ +K L + + +++++LR+NA I + Sbjct: 415 DTREKDVSDTVKRNLAREALYQRLAPQAQEDWLQELRANAYIQIF 459 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 105/309 (33%), Gaps = 29/309 (9%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--------NGELEKIAVQELIVETL 85 ++ + +N I + +A + + L+ + LI+ L Sbjct: 45 SVRESTNGMIALVNDTPILKSQLVSAMATAQARIQASGQPAPSAQRLQNDVLNSLILRQL 104 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + ++++GI D++ VN + A++ GL+ ++ + KQ + + + Sbjct: 105 QLDMVKRAGIRPDADVVNQSLARFAQSQGLTSLSQLQQTLDAKQPGSYASLRAQVIEEES 164 Query: 144 WPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + ++ + E +I A + + + EY + D+ + ++ Sbjct: 165 LKALQQSQVANRVRITEQDIDAFLASPEAQRLQSAEYRTIHIRIPFSDDYNRITESEKQT 224 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHD---------VSIGKAQYLLESDLHPQF-QNLLK 251 + L + + + ++ V G Y S L + + Sbjct: 225 ALQIAQQAKNLLMNTDDAQSVLDELSAGIAKNYVAPVQGGDMGYHEASGLPTDIAKQITP 284 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT-------PTKIEKHEAEY 304 + T P +T +G++ + + DKR+ I + + E+ + Sbjct: 285 LNVGQVTEPQITPEGIDVVKLVDKRNNDNMIIPQWKVRHILIKTDEQNSDALAEQKINDL 344 Query: 305 VKKLRSNAI 313 ++LR +A Sbjct: 345 YEQLRHDAD 353 >gi|150014979|ref|YP_001307233.1| peptidylprolyl isomerase [Clostridium beijerinckii NCIMB 8052] gi|149901444|gb|ABR32277.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium beijerinckii NCIMB 8052] Length = 362 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 32/342 (9%), Positives = 97/342 (28%), Gaps = 28/342 (8%) Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63 K L F+ L + + ++ A+ + T+ E IT GD+ K + Sbjct: 17 KTLKKLKKFVAALAMVTIAVSAMGCKMIEKTPEAIQKTVLATVGNEKITKGDLDKEMEKY 76 Query: 64 KLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 Q + +K + L+ + + Q+ + + + +N Sbjct: 77 TAQLKQQYGDNYESNAQVKDQLQQAKKQELDSLVTQKVVLQKATELNLKPSDDDINKQVD 136 Query: 108 QHARNTGLSAEDFSSFLD--KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + F +Q + + ++ V+ D + + ++ Sbjct: 137 DQIAQIKSQYSEEGQFESVLEQNGLTEDQLKDVVKNNVIMQAVQQDIVKDIEVTDDDVQT 196 Query: 166 NKQKMKNITVRE----YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + K+ + ++ + + + D + ++ Sbjct: 197 YYNENKDSKYTQGAGANASHILIAEKASDGSIDYDASLTKANDIKAKLDSGADFAKLAKE 256 Query: 222 FA-SKIHDVSIGKAQYLLESD---LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + G ++ + + + + P +Q G I +D Sbjct: 257 NSTDSGTKDNGGSLGFVAYNSTQLVAEFMDGFKNLKEGEISAPVKSQFGYHIIKATGLKD 316 Query: 278 --LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + +K + + K + + + + +++ + Y Sbjct: 317 SQVTPFEQVKDQIKSSLLQQKQQDALSSKITEWKTDLKVKTY 358 >gi|296131722|ref|YP_003638969.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermincola sp. JR] gi|296030300|gb|ADG81068.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermincola potens JR] Length = 352 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 102/336 (30%), Gaps = 39/336 (11%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 +S F K+L +L+ +V + +NGE IT + KR+ +KL Sbjct: 1 MSKFRKILGLALILVFAVVVAGCGA-------KTVAEVNGEKITQEQLDKRVNKMKLAYE 53 Query: 69 NG--------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 ++K + ++I + L KQ EK G+ V F + + Sbjct: 54 QQGASFEGEQGKQMLEAIKKQTLDQMIDQLLIKQAAEKEGVAPSDAEVQKRFDEIKKRFK 113 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 E + + + Q D + E ++ ++ K+ Sbjct: 114 SEKEFEDALKNYNYTE--EELKEYIAQQAMTDALFQKVTKDVKVTEEDMKKYYEERKDSF 171 Query: 175 VREYLIRTVLFSIPDNKLQN-----QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 I+ I + + +K ++ ++ + Sbjct: 172 KEPEKIKARHILIKFDTANEKVGRKEEEAKKMAEELIAKLNNGADFAELAKEKSEDPGSK 231 Query: 230 SIGKA-------QYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRD--L 278 + G Y + +F + + T P TQ G I + DK+ Sbjct: 232 NDGGLLKDPMGSDYFARGVMVKEFDDAAFALKKGEITKKPVKTQFGYHIIKVEDKKPEKQ 291 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + T+ ++ +Y++ L+ A I Sbjct: 292 KTYEEAKEQIKRDLPNTRKQEVFNKYIEGLKQKAKI 327 >gi|332185309|ref|ZP_08387058.1| PPIC-type PPIASE domain protein [Sphingomonas sp. S17] gi|332015033|gb|EGI57089.1| PPIC-type PPIASE domain protein [Sphingomonas sp. S17] Length = 475 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 45/263 (17%), Positives = 95/263 (36%), Gaps = 10/263 (3%) Query: 44 TTINGEVITDGDISKRIALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGI 95 +N V+T D+ +R+AL L +++LI ETL+ QE + + I Sbjct: 85 AIVNDTVLTGTDLDQRMALAMALNNVTKLSPEDRDRLRMQILRQLIDETLQIQEAKSAEI 144 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 T + ++ + + ++ G + ++FL + G + ++ + + W ++ Sbjct: 145 TVTAPEIDQAYARFSQQFGKTPTQMTAFLRQVGSSERSMRRQIEGELAWNRYLRKRVEPF 204 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + E+ A + +++ E +F + Q Q F R AE + + Sbjct: 205 INVGDEEVNAIRARLEAAKGTEEYNLKEIFLSANEATQQQVFANARQIIAEIQKGQ-QPF 263 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICD 274 F+ G ++ + L P+ Q+ P G + + D Sbjct: 264 EYFARSFSEASTRAVNGDLGWVRAAQLPPELQSAAQSMQVGQVAGPIPIPGGFSILYLTD 323 Query: 275 KRDLGGEIALKAYLSAQNTPTKI 297 KR + + LS + K Sbjct: 324 KRQVLTADPRDSRLSLKQLTIKF 346 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 3/87 (3%) Query: 233 KAQYLLESDLH-PQFQNLLKKSQNNTTNPYVTQK-GVEYIAICDKRDL-GGEIALKAYLS 289 + L P + LLK T P+ + + GV + +CD+ + G + + Sbjct: 388 DNDQVTIRQLPAPLQEILLKMQIGQATPPFGSPEQGVRSLVLCDREEPRSGNLPTSDQIQ 447 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 Q ++ + ++ LR +A+I Y Sbjct: 448 NQVEQQRVNLRANQKMRDLRRDAVIEY 474 >gi|260576192|ref|ZP_05844185.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sp. SW2] gi|259021672|gb|EEW24975.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sp. SW2] Length = 285 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 32/311 (10%), Positives = 83/311 (26%), Gaps = 51/311 (16%) Query: 9 LSDFIKLL-TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK 67 ++ F K T + + + + T+NG IT G + L Q Sbjct: 1 MAKFAKFWPTVALGAACAFGMALPVSAEDLTAETVVATVNGTNITLGHMIVLRDGLPAQY 60 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + L K + +LI ++ +Q + + D+ ++ Sbjct: 61 SDLPDDVLFKGILDQLIQQSALEQSLGGTLTKRDTLSLENS------------------- 101 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + ++ + ++ + + EY +L Sbjct: 102 --------------RRGYLSGVALQAAVAGAVTDESLQAAYDAKYAHAEPTTEYHAAHIL 147 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 +++ K + +S + G + + Sbjct: 148 -----------VDSEEKAKALKTQIDGGADFAELAIANSSDGSAANGGDLGWFGLGMMVK 196 Query: 245 QFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 F++ + + P TQ G + + + R + + + Sbjct: 197 PFEDAVVALKPGEVSAPIQTQFGWHLVKLTETRVANA--PALDDVRDELAGEIEQAALTA 254 Query: 304 YVKKLRSNAII 314 +++KL + A + Sbjct: 255 HIEKLTAAATV 265 >gi|116626458|ref|YP_828614.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Solibacter usitatus Ellin6076] gi|116229620|gb|ABJ88329.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Solibacter usitatus Ellin6076] Length = 418 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 104/307 (33%), Gaps = 20/307 (6%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALL------------KLQKINGELEKIAV 77 + + + I +NG++IT G++ K+ + +LQ E + Sbjct: 17 AAADNNVKVVEEIAAKVNGDIITRGELEKKRQEIEAEAKRQGLTGARLQDAVKEAHADVL 76 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK-Q 136 + I L Q+ + I+ D++ + + F F+ +Q Q Sbjct: 77 SKEIDTLLLVQKGKDLNISVDADVTRRLAEIQVQQKISDPDKFQQFIREQTGMTFEDFKQ 136 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT---VREYLIRTVLFSIPDNKLQ 193 + + + V+ + M E E+ + K+ + + ++ S + Sbjct: 137 QMKNEMLTQRVIGQEVMRNITVPEAELQKYYDEHKSEFMRKEAQVFLSQIVISTEGKSPE 196 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL-LK 251 +K+ KD + K + + + G + + + + + K Sbjct: 197 QVAAAEKKAKDLVARANKGEKFSDLARDNSDDVETAKNGGYVGSMPKGMMDKAIEEIVFK 256 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + ++P+ +G + + D+ + G +K L + T K Y+ +LR Sbjct: 257 AKKGFVSDPFKRAQGFVILKVEDRFEAGQASFDEVKNELQDRLTQPKANAKVRTYLTQLR 316 Query: 310 SNAIIHY 316 +A + Sbjct: 317 EDAFLEI 323 >gi|114762082|ref|ZP_01441550.1| PPIC-type PPIASE domain protein [Pelagibaca bermudensis HTCC2601] gi|114545106|gb|EAU48109.1| PPIC-type PPIASE domain protein [Roseovarius sp. HTCC2601] Length = 286 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 80/309 (25%), Gaps = 54/309 (17%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMS----SRIRTTINGEVITDGDISKRIALLKLQKIN 69 K LTT + + + + + T+NGE IT G + L Q Sbjct: 3 KTLTTLSAAALAVTMAMPAQAQDQAEEMELDTVVATVNGEDITLGHMLMVRTTLPEQYQQ 62 Query: 70 ---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 L + +L+ + Q+ Sbjct: 63 LGDDVLWDGILDQLVRQAALAQDEN---------------------------------AV 89 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + + +VVK + ++ T +E+ +L Sbjct: 90 ETKRVTLSIDNERRALLAGEVVKAIAETSVSDEAVQAAYEADYTDAETGKEFNASHILVE 149 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 ++ ++ + ++ + G+ + + F Sbjct: 150 TEEDAQALVEELE-----------GGADFAELAREKSTGPSGPNGGELGWFAAGMMVEPF 198 Query: 247 QNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305 Q + P TQ G I + + R E + + + ++ +Y+ Sbjct: 199 QEAVEMLEVGAVSEPVQTQFGWHVIKLNETR--AKEAPALDEVRGEIEMSLQQQAVEKYI 256 Query: 306 KKLRSNAII 314 + ++A + Sbjct: 257 DETLASAEV 265 >gi|146337720|ref|YP_001202768.1| putative peptidylprolyl isomerase [Bradyrhizobium sp. ORS278] gi|146190526|emb|CAL74525.1| putative Peptidylprolyl isomerase [Bradyrhizobium sp. ORS278] Length = 274 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 84/294 (28%), Gaps = 47/294 (15%) Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDI---SKRIALLKLQKINGELEKIAVQELIV 82 + + ++ ++ + +NG I D+ + + Q ++ + LI Sbjct: 1 MSLLVAPARAADDANPVLAKVNGAEIRKSDVALAEEELGPSLAQMDPATKDENVLSFLID 60 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 L + E + + + + Sbjct: 61 MKLVSKAAEDKKVAESEDFKKRL------------------------------AFTRNRL 90 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + ++ ++ M+ + + +E R +L D + + K Sbjct: 91 LMDSLLASEGKAATTPDAMKKVYEEASKQIGGEQEVHARHILVETEDEAKAVKAELAK-- 148 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPY 261 +K + G + + + P+F N+ ++P Sbjct: 149 ---------GADFAELAKKKSKDPGASDGGDLGFFTKEQMVPEFANVAFSMEPGKISDPV 199 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 TQ G I + +KR+ + +Q K +A+YV KLR A I Sbjct: 200 KTQFGWHIIKVEEKRNRKP--PEFEQVKSQIETYVTRKAQADYVGKLREAAKIE 251 >gi|158429505|pdb|2PV3|A Chain A, Crystallographic Structure Of Sura Fragment Lacking The Second Peptidyl-Prolyl Isomerase Domain Complexed With Peptide Nftlkfwdifrk gi|158429506|pdb|2PV3|B Chain B, Crystallographic Structure Of Sura Fragment Lacking The Second Peptidyl-Prolyl Isomerase Domain Complexed With Peptide Nftlkfwdifrk Length = 299 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 87/265 (32%), Gaps = 6/265 (2%) Query: 58 KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 + + L ++ LI++ + Q +K G+ ++ A+ ++ Sbjct: 32 NAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTL 91 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 + S L G+ N ++ + + I +V N+ + L E+ + Q++ N Sbjct: 92 DQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDAS 151 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKA 234 + IP + V + A + ++ ++ G+ Sbjct: 152 TELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQM 211 Query: 235 QYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL--KAYLSAQ 291 + +L F + + P + G + + D R I+ K Sbjct: 212 GWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISAAQKDRAYRM 271 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHY 316 K + A ++++ R++A + Sbjct: 272 LMNRKFSEEAASWMQEQRASAYVKI 296 >gi|170747170|ref|YP_001753430.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium radiotolerans JCM 2831] gi|170653692|gb|ACB22747.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium radiotolerans JCM 2831] Length = 311 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 73/275 (26%), Gaps = 40/275 (14%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 + ++NG+ IT GD++ L D Sbjct: 60 VVASVNGKPITQGDLAIAADDPALSLPG---------------------------VDEAQ 92 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 V + + + A+ + Y + + D ++ + Sbjct: 93 KKNLLVDYMVDLRVGAQAAEAAKIGDTPEFKRKLAYFRDKLLLDDYLEQEAKRAVTPEAE 152 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 ++ E R +L + K+I + K + K Sbjct: 153 HAIYDQTVKLMKPEEEVHARHILV--------DNEAEAKKIAARIKGGEDFAKVAAEASK 204 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 G + + + P F N ++P TQ G I + +KR Sbjct: 205 --DPGSKAEGGDLGWFTKERMVPDFANAAFAMKAGQVSDPIKTQFGWHVIKVEEKRTKP- 261 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 L Q I K + + + KLRS A I Sbjct: 262 -QPTFDELKEQIDQHLIRKAQQDMILKLRSEAKIE 295 >gi|319796618|ref|YP_004158258.1| sura domain [Variovorax paradoxus EPS] gi|315599081|gb|ADU40147.1| SurA domain [Variovorax paradoxus EPS] Length = 469 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 95/302 (31%), Gaps = 18/302 (5%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------GELEKIAVQELI 81 + + I +N E IT+ D+ R+ L + + GEL ++ ++ LI Sbjct: 51 ASPSAAPVQRAAEFIVALVNSEPITNTDVQSRVTRLIKENPDAERVPRGELTRLVLERLI 110 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 VE + Q +++GI D ++ AR +S + + +GI F++ L Q Sbjct: 111 VERAQLQLAKENGIKVDDVAIDQAEQTVARQNEISLVELRRRVAAEGIALADFRKDLRDQ 170 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL------IRTVLFSIPDNKLQNQ 195 + + + K + E + +N + + ++ + Sbjct: 171 LLLTRLRDREVESKVKISDSEADEYLRDQRNSNTKNAALQNLNLAQVLVVLPENATDAQV 230 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQ 254 QK+ + E + + + + G P F + + Sbjct: 231 AAAQKKAQGLAERARAGEDFEKLVRENSDSPDRANGGAIGMRSADRYPPLFVDAVQSTAV 290 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNT---PTKIEKHEAEYVKKLR 309 N P + G + + K +G + + P + + + + Sbjct: 291 NGIAGPVRSSAGFHVLKVLAKAQIGSLDATVTQTQVRHILLLNDPKRTTAQAVAQLAEFK 350 Query: 310 SN 311 Sbjct: 351 RR 352 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 53/167 (31%), Gaps = 2/167 (1%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ A Q + + D K V + + + Sbjct: 297 VRSSAGFHVLKVLAKAQIGSLDATVTQTQVRHILLLNDPKRTTAQAVAQLAEFKRRVQAG 356 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + P+F+ + + S ++P V++ GV I Sbjct: 357 TADFAGLARDNSQDASAKEGGDLGWSRPGQFVPEFEEAMDRLSPGQISDPVVSRFGVHLI 416 Query: 271 AICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +RD + + +IE+ +V+++R+ A + Y Sbjct: 417 QVVGRRDSKLTQSEQREAARNVLREQRIEEAFTTWVQEVRARAYVEY 463 >gi|117925616|ref|YP_866233.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Magnetococcus sp. MC-1] gi|117609372|gb|ABK44827.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Magnetococcus sp. MC-1] Length = 442 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 37/329 (11%), Positives = 108/329 (32%), Gaps = 29/329 (8%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWA--MSSRIRTTINGEVITDGDISKRIA-------LLK 64 K + +++ ++ ++ A I + GE+I + +I+ ++ Sbjct: 5 KRWVRWVIMVSMILLSTLTKPVEAGVPLDGIAAVVEGEIILESEIADQLRAQVMKFSRAG 64 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 Q L + + ++ L+ Q+ ++ GI V+ + A++ +S E F L Sbjct: 65 EQVDVALLRRRVLDGAVMRVLRAQKAKQLGINLKDADVDGAVQRMAQHNNVSVEQFKMML 124 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI------TVREY 178 ++G+G + + + Q +++ + + E+ + + Sbjct: 125 AREGVGFDSYLSSIRDQLYVQQIIRQVILPSVRVSDEEVQDLYKATRQDPEKIGGEPELR 184 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 + + +L + + + + K + + ++ G + Sbjct: 185 IKQILLSVPENALIHRVREISDKAKSLVSQLRGGASFARLASEHSDDPSGLNGGDMGWFK 244 Query: 239 ESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK--------AYLS 289 +L Q ++ + K + P T +G + ++R + ++ Sbjct: 245 RGELQAQIEDLVFKLEDGAISEPVRTTQGFHIFMVAERRVQQHFGQSEGDHVKVYARHIL 304 Query: 290 AQN---TPTKIEKHEAEYVKKLRSNAIIH 315 + + + ++KLR I Sbjct: 305 LKVAPNSDAQTSAQVRNQLEKLRRE--IE 331 Score = 65.5 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 56/161 (34%), Gaps = 4/161 (2%) Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 E + + + + V+ Y +L P++ Q V+ +++ Sbjct: 281 ERRVQQHFGQSEGDHVKVYARHILLKVAPNSDAQTSAQVRNQLEKLRREIEAGASFAEVA 340 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRD 277 ++++ G + P F+++ + P + G I + + + Sbjct: 341 KRYSQDDGSAQKGGDLGGFGRGVMVPSFEDVAFFLKPGVVSEPVRSPFGWHLIEVTKREE 400 Query: 278 LGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K L+ + KI+ ++++ LR ++ + Y Sbjct: 401 QKADTMDEAKKELTVRLREAKIKARYTQWLRDLRLSSFVDY 441 >gi|126736394|ref|ZP_01752136.1| PPIC-type PPIASE domain [Roseobacter sp. CCS2] gi|126714215|gb|EBA11084.1| PPIC-type PPIASE domain [Roseobacter sp. CCS2] Length = 383 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 98/237 (41%), Gaps = 4/237 (1%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 T+N VIT ++S+RI LL++ + G+L + A LI + LK+QE+ + G++ + + Sbjct: 9 VITVNDRVITQYELSQRIRLLEVFRTPGDLNEAARNALIEDRLKQQELARFGVSVPEDAL 68 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + A +S F+ L + GI + + ++ + +W D +++ F + + + Sbjct: 69 QQAMEEFAGRANMSLPQFTRVLAQDGIDISTLRDFVEVGILWRDFIRSRFNRQITITDAD 128 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + N T + ++ + P + + D + + Sbjct: 129 VERAIVQQGNTTSQLEVLLNEIIIAPPPG---REAAAAQAADQISRMRSFAEFEAAARQV 185 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ + G+ + S+ PQ ++++ + T+P + + R+ Sbjct: 186 SALPSRENGGRLDWTPVSNFPPQIRSIILDLDRGEVTDPIEIPNAIALFQLRGTREA 242 Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 23/267 (8%), Positives = 75/267 (28%), Gaps = 12/267 (4%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY-FFVQH 109 ITD D+ + I Q ++ + E+I+ +E + + + + Sbjct: 124 ITDADVERAI---VQQGNTTSQLEVLLNEIIIAPPPGREAAAAQAADQISRMRSFAEFEA 180 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 A + + ++F + + + + + + Sbjct: 181 AARQVSALPSRENGGRLDWTPVSNFPPQIRSIILD--LDRGEVTDPIEIPNAIALFQLRG 238 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + + ++ ++ + + C+ L A Sbjct: 239 TREAVLPAAAPLSIEYAAYYIPGGRTDAGLAQ----AAAVRDQVDTCDDLYGVARNQPAE 294 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG--VEYIAICDKRDLGGEIALKAY 287 ++ + + + L + + G + ++ +C + G + Sbjct: 295 TLDRLTEAPSAISNDVALELARLDPGEVSYNLTRNNGETLVFLMLCARNSAGAGTTDRNA 354 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAII 314 + Q ++ ++ LR++A+I Sbjct: 355 IRNQIRSQRLNALADALLEDLRASAVI 381 >gi|297181233|gb|ADI17427.1| parvulin-like peptidyl-prolyl isomerase [uncultured Rhodospirillales bacterium HF0070_31K06] Length = 293 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 37/317 (11%), Positives = 84/317 (26%), Gaps = 53/317 (16%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR-----IRTTINGEVITDGDISKRIALLKL 65 ++ L V I+ + ++ R + T+NGE I G + + L Sbjct: 1 MLLRALPAVIVASAAFILSTGHLAAQSVRDRLAKDVVVATVNGEQILSGHLLQAFQNLPR 60 Query: 66 QKINGELEK---IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 + L +++LI L ++ ++ D+ Sbjct: 61 KHRQRGLRAVYGELLEQLIENRLLTYHGRENNLSGDAEVK-------------------- 100 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + Q + + + ++++ + + E R Sbjct: 101 ----------ALVKEAEDQIVARVYLNRLISQSITDSKLKVRYEELVKNTPSHEEVRARH 150 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 +L ++ ++ + + + G Y SD+ Sbjct: 151 IL-----------VSTEQEAQEVLKLLAGGQPFEEVAKTHSKDPAASRGGDLGYFRSSDM 199 Query: 243 HPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 F T+ P T+ G I + D+R L Q + Sbjct: 200 VKPFSAAAFAMKPGETSASPVKTEFGWHVIKVEDRRQSSV--PPFDRLRPQIARDLGRRI 257 Query: 301 EAEYVKKLRSNAIIHYY 317 E + R+ + I + Sbjct: 258 AIEILNAARNGSEIQRF 274 >gi|154247041|ref|YP_001417999.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xanthobacter autotrophicus Py2] gi|154161126|gb|ABS68342.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xanthobacter autotrophicus Py2] Length = 338 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 81/281 (28%), Gaps = 49/281 (17%) Query: 40 SRIRTTINGEVITDGDISKRIAL----LKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 + T+NG I D++ + L Q + E+ + L TL + E + Sbjct: 75 DTVVATVNGTPIRQSDVTIALEDIGAGLPPQLQGAQREEYVLSFLTDMTLLAKAAEAQKL 134 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + Y +++ ++ + Sbjct: 135 DQSPDFQQRI------------------------------AYARTKALMETLMTQEAKKA 164 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 ++ E R +L + + K+ + Sbjct: 165 VSEEAKHKTYDEFVKSAPAEAEVRARHIL-----------VDDEAKAKEIAKKAKAGEDF 213 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICD 274 + ++ G Y + + P+F + K + ++P +Q G I + D Sbjct: 214 AKLAKDYSKD-SAEDGGDLGYFTKDQMVPEFAEAAFKLDKGQVSDPVKSQFGWHVIKVED 272 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 KR +S Q + K +A+ V KLR++A I Sbjct: 273 KRQKPV--PTYDQVSDQVEQYLVRKAQADLVTKLRTDAKIE 311 >gi|304394142|ref|ZP_07376065.1| peptidylprolyl isomerase PrsA1 [Ahrensia sp. R2A130] gi|303293582|gb|EFL87959.1| peptidylprolyl isomerase PrsA1 [Ahrensia sp. R2A130] Length = 277 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 80/297 (26%), Gaps = 48/297 (16%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQKIN 69 + LT + + +V+ + A +I + E IT ++ + +A + Q Sbjct: 1 MNKLTFRSAVAASTLALLVALPASAQEDKIVAKVGSEEITQSELDQAMADMAQQFAQFPE 60 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + + A+ LI + K GI D + Sbjct: 61 PQRKARALDALIDIEVFAALARKEGIDKDPKLLAR------------------------- 95 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + L +++ + +++ +K+ +E R +L + Sbjct: 96 -----MELLNKRALHNGYFTQKVQAGITDEQLQARYDKEIGSAPRQKEVKARHILVKTEE 150 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 ++ + ++ G + + + P+F+ Sbjct: 151 EAKAIIEELK-----------SGADFVELAKTKSTGPSGPQGGDLGFFKKGQMVPEFEKA 199 Query: 250 LKK-SQNNTTN-PYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEA 302 + T P TQ G I + + RD K L + Sbjct: 200 AFELEAGKVTETPVKTQFGFHIIKVDETRDTPLPTFEQSKEQLRQLVLTEAYAEAIK 256 >gi|87311619|ref|ZP_01093736.1| probable peptidyl-prolyl cis-trans isomerase [Blastopirellula marina DSM 3645] gi|87285622|gb|EAQ77539.1| probable peptidyl-prolyl cis-trans isomerase [Blastopirellula marina DSM 3645] Length = 558 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 88/307 (28%), Gaps = 33/307 (10%) Query: 41 RIRTTINGEVITDGDI--------SKRIALLKLQKING-------ELEKIAVQEL----I 81 RI + G+ I GDI RIA L ++ E ++A++EL I Sbjct: 230 RIIALVGGQPILAGDILGPVNQALETRIAELSPEQREQVTEEVLEEQRQMALRELLPGLI 289 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS----------FLDKQGIGD 131 + + ++ + + + ++ L ++G Sbjct: 290 DTKMIYLDFIRTIPPDKLSEMQGHLDSQYAEYQMQSDLDQYEVHTPAELDIVLRREGSSL 349 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 K+ Q + +K ++ + + +K Sbjct: 350 EKKKRLFLEQIVASQQLKTHVKPNTEVSHQQMLDYYHDHAADYASPARAKWEQLMVRFDK 409 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNL 249 ++ ++ I + LR +K + G + + L + + Sbjct: 410 FSSKAEAEQAIAEMGNQVLRGAPLDAVAKKESQCFRASEGGLYDWTTRNSLKNETIDAAI 469 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 N + + +G + + ++ + + + + + + + +YV Sbjct: 470 FSLPTNRLSQIIESPEGYHIVRVLERDEASIKPFRDAQLEIKEKIRRERANQAQRDYVAD 529 Query: 308 LRSNAII 314 +R I Sbjct: 530 VRKRTQI 536 >gi|260596477|ref|YP_003209048.1| peptidyl-prolyl cis-trans isomerase SurA [Cronobacter turicensis z3032] gi|260215654|emb|CBA27953.1| Chaperone surA [Cronobacter turicensis z3032] Length = 440 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 106/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ +V S+ + + ++ +N V+ + D+ + +KL L Sbjct: 19 LLLGITLVVNTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNANQAGQQLPDDSTL 78 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ + ++ A+ ++ + S L G+ N Sbjct: 79 RHQILERLIMDQIMLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 138 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ +++ N + IP + Sbjct: 139 TYRAQIRKEMIISEVRNNEVRRRVTILPQEVETLAEQVGNQNDASTELNLSHILIPLPEN 198 Query: 193 QNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + + +++ + G+ + +L F Sbjct: 199 PTADQVSEAETQARSIIDQARNGGDFGKLAITYSADQQALKGGQMGWGRIQELPSVFAQA 258 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G I + D R + ++ + +P ++ + Sbjct: 259 LSTAKKGDVIGPIRSGVGFHIIKVNDLRGQSQTVSVTEVHARHILLKPSPIMTDQQARQK 318 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 319 LEEI--AADIK 327 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 84/273 (30%), Gaps = 16/273 (5%) Query: 58 KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 + + L Q N + L + E + ++ T + ARN G Sbjct: 167 QEVETLAEQVGNQNDASTELN-LSHILIPLPENPTADQVSEAETQARSIIDQARNGGDFG 225 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------FMLKYGNLEMEIPAN 166 + ++ Q + IQ + + G +++ Sbjct: 226 KLAITYSADQQALKGGQMGWGRIQELPSVFAQALSTAKKGDVIGPIRSGVGFHIIKVNDL 285 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + + + ++V E R +L +Q QK + A + + +F+ Sbjct: 286 RGQSQTVSVTEVHARHILLKPSPIMT-DQQARQKLEEIAADIKSGKTTFAQAAREFSQDP 344 Query: 227 -HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG-GEIA 283 G + P F++ + S+ + P + G I + D R + A Sbjct: 345 GSANQGGDLGWAAADIYDPAFRDALMNLSKGQMSTPVHSSFGWHLIELLDTRKSDRTDAA 404 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K K + A ++++ R++A + Sbjct: 405 QKDRAYRMLFNRKFSEEAATWMQEQRASAYVKI 437 >gi|159046106|ref|YP_001534900.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dinoroseobacter shibae DFL 12] gi|157913866|gb|ABV95299.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dinoroseobacter shibae DFL 12] Length = 280 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 33/314 (10%), Positives = 76/314 (24%), Gaps = 58/314 (18%) Query: 13 IKLLTTYFV-LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-- 69 + ++ L + + + + T+ GE IT G + + L Q Sbjct: 1 MNIIRKPLARLALGLTLLSPVAVQAQDADTVLATVGGEEITLGHLIAVASSLPTQFQQLA 60 Query: 70 -GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 L ++++I + Q + S Sbjct: 61 DDRLYSGLLEQMIRQVALAQSMGDSLSK-------------------------------- 88 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + ++ ++ + + +E+ +L Sbjct: 89 -ELELSLESQRWALMANSIIDGAIEAAVTEESVQALYDAEFGNIEPEKEFNASHIL---- 143 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 ++ + + + G+ + + F+ Sbjct: 144 -------VETEEEAQALVTELEGGADFAELARARSVGPSGPNGGELGWFGPGMMVAPFEM 196 Query: 249 L-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 ++ + P TQ G I + D RD + + E+ E V Sbjct: 197 AVIRMEPGTVSEPVETQFGWHVIRLNDIRDSAA--QPLEEVRGRLEERLSEEAAQEVVDS 254 Query: 308 L-------RSNAII 314 L RS A I Sbjct: 255 LVAATEITRSEAEI 268 >gi|296282383|ref|ZP_06860381.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Citromicrobium bathyomarinum JL354] Length = 492 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 88/285 (30%), Gaps = 18/285 (6%) Query: 44 TTINGEVITDGDISKRIALLKLQK--------INGELEKIAVQELIVETLKKQEIEKSGI 95 +NG VIT DI R+AL+ L ++ LI ETL+ Q + Sbjct: 102 AKVNGTVITGTDIDHRVALVLAASERKEIPADQLQALRMQVLRNLIDETLQIQAAAAQDM 161 Query: 96 TFDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 S VN + A+ G + + FL G K+ + + W +++ + Sbjct: 162 EVSSEEVNQRYAILAQQNFGSNPQQMDKFLIAAGSSPATLKRQIQGEIAWQMLLRRNVAP 221 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 E+ +++K +E ++ + + Sbjct: 222 FINVSAEEVNDTIERLKTSRGQEEYRLAEIYLSATPETAATVEANAEQIM--DQIRAGGS 279 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAIC 273 +F+ G ++ L Q + K + P G + + Sbjct: 280 FQAYARQFSESTTASVGGDLGFVRLGTLPGQMAEVATKMTPGQLVGPVPIPGGYVIMLLL 339 Query: 274 DKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 DKR + A L Q T + + R+NA + + Sbjct: 340 DKRQVLTADPRDAVLSLKQIAITFPQGTSQD-----RANARVEEF 379 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 3/87 (3%) Query: 233 KAQYLLESDLHPQFQNL-LKKSQNNTTNPYVT-QKGVEYIAICDKRDLGGE-IALKAYLS 289 + DL PQ Q + TT P+ + Q GV + +C + D + Sbjct: 405 DNDSITVRDLPPQLQASLMDLQVGQTTPPFGSMQDGVRVLLLCGRDDPEVNGEPDFDQIM 464 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +I K +++ LR +AII Y Sbjct: 465 DRIEEERISKRAQRFLRDLRDDAIIEY 491 >gi|182414803|ref|YP_001819869.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Opitutus terrae PB90-1] gi|177842017|gb|ACB76269.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Opitutus terrae PB90-1] Length = 328 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 99/296 (33%), Gaps = 17/296 (5%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------------ELEKIAVQELIVETLK 86 ++ I + +VIT D+ + IA L Q +L+ +Q LI L Sbjct: 33 ANGIAAIVEDKVITVDDVRREIAPLIAQLQREARNEREFNEKLEQLQDDVIQSLIDRVLI 92 Query: 87 KQEIEKSG--ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 +E K DS N + F ++L +G +++ + I+ Sbjct: 93 VKEFRKDEKKHIPDSFIDNRLADILSEQFDNDRSKFLAYLHSRGTTLREYRREVEEDIIY 152 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 + + + + I + K+ +E + L + ++ + Sbjct: 153 QYMRQEQRKSQSIVSPVRIETFYNENKDRFYQEDGVHLRLIQFSRANGETDEDLRAKANL 212 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVT 263 K + +++ G + SDL P+F + L + ++P + Sbjct: 213 VMARIKAGEKFEDLAREYSQDSRRAKGGDWGWQKRSDLKPEFSEPLFSLKKGEVSDPIIL 272 Query: 264 QKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 +G + D++ + ++ + + ++++LR N + +Y Sbjct: 273 PEGCFILFAEDRKYAGIQPIDEVRDEIERVLVQQMSRNSQEHWLERLRRNGYVKHY 328 >gi|296532230|ref|ZP_06894978.1| peptidyl-prolyl cis-trans isomerase [Roseomonas cervicalis ATCC 49957] gi|296267447|gb|EFH13324.1| peptidyl-prolyl cis-trans isomerase [Roseomonas cervicalis ATCC 49957] Length = 401 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 91/266 (34%), Gaps = 9/266 (3%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETL 85 + A + I +NG+V+T G+++ R L L L + L+ E L Sbjct: 1 GAAPAQVNSIVAVVNGDVVTAGEVAGRARLFALNAGMGPAPDVVQRLRPQVTRLLVDERL 60 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + QE+++ GI V + GL L GI + Q W Sbjct: 61 RMQEVQRRGIPVPDEDVAEAVQEIESRNGLPRGGLVGQLRAAGIPPRALFDQIRNQIGWS 120 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 +V+ + E+ K T + + + +F D+ V++ ++D Sbjct: 121 RLVRAQLGQQAQISPAEVAEFVAAHKARTGQPEYLVSEIFIPVDDPGAEPE-VRRFVEDV 179 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQ 264 R +F+ + G ++ + P ++ + NP Sbjct: 180 VGQLRRGVPFPAAATQFSQSQTALQGGDMGWVRGEEFDPGVASILERMPPGAIANPQRVP 239 Query: 265 KGVEYIAICDKRDLGGEIALKAYLSA 290 G + +A+ KR+ G ++A L Sbjct: 240 GGFQIVALRQKRETGRDLATMVTLRQ 265 Score = 39.3 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 34/144 (23%), Gaps = 2/144 (1%) Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN-KLEKFASKIHDVS 230 +R Q+ L+ + S Sbjct: 255 RDLATMVTLRQAFLGFTSALDPQNPTQQQIQALERARALQGQNCQAVEAAARGSSRPADP 314 Query: 231 IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 G L + + N + P VT G+ +A+C + Sbjct: 315 GGPLP-LEQMQPPQLRSIVAGLQVNRASQPLVTPDGILVLAVCSRETRNLAELTPEQARV 373 Query: 291 QNTPTKIEKHEAEYVKKLRSNAII 314 Q +IE + + LR A I Sbjct: 374 QILRDRIELASRQLQRDLRRRAQI 397 >gi|295111179|emb|CBL27929.1| Parvulin-like peptidyl-prolyl isomerase [Synergistetes bacterium SGP1] Length = 303 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 33/290 (11%), Positives = 83/290 (28%), Gaps = 44/290 (15%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQ----KINGELEKIAVQELIVETLKKQE 89 +++ + G IT+ D++ + + Q N + ++ + E++ L E Sbjct: 31 PKPTEENQVLARVEGREITEADVNAVLQSMGPQGMMMYGNPQGRQLILDEIVSMYLFSLE 90 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 EK + + + + F + QS+ ++ Sbjct: 91 AEKEKLDGEQDFI------------------------------DFMARVRTQSLAQRAMR 120 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N E E + K+ + I I D+ + + Sbjct: 121 NAV-KDVKATEEEAQKFYDEHKDQFTQPERIHARHILISDDATSADTIAR-----VQADL 174 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGV 267 + +K + G + + P+F + K + + P + G Sbjct: 175 KAGASFDEEAKKLSLCPSAPQGGDLGEFTKEQMVPEFSDAAFALKEPGDVSEPVKSPFGW 234 Query: 268 EYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + + +K + T + ++ V++L+ + Sbjct: 235 HIIRLEGRTPAQLIPFDDVKDQILQDLTGQQQQERIKAKVEELKKAYKVE 284 >gi|325981517|ref|YP_004293919.1| SurA domain [Nitrosomonas sp. AL212] gi|325531036|gb|ADZ25757.1| SurA domain [Nitrosomonas sp. AL212] Length = 441 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 106/299 (35%), Gaps = 17/299 (5%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQELI 81 + + I +N +VIT ++ + I + LE+ ++ +I Sbjct: 27 LAFVPEAKPINHIVAVVNEDVITRHELDEAIKTAISRMQQQGMQIPDRHILEEQVLESVI 86 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + ++ Q ++ G++ ++ + A + L+ +F + L+ GI N F++ + + Sbjct: 87 TKRIQIQHAQEVGLSVAETELDETINRIAEDNQLTLPEFHTVLENDGISYNKFREEIREE 146 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 I + + + + E E+ Q + V + R I + +Q+R Sbjct: 147 MIIARLKEREVKHQVNVTEGEVDNFLQTQEASAVGDDEYRLAHIMILVPENMTADQIQQR 206 Query: 202 IKDAEESRLRLPKDCNKL---EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNT 257 + AE + RL + +F+ + G ++ S + P F +L+ + Sbjct: 207 AERAEMALTRLREGAEFSQIVSEFSDAADAKNGGIIEWRPISQMGPAFAQILEALQPGDI 266 Query: 258 TNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 T+ + G + +R + ++ + E + L+ Sbjct: 267 TSIVQSPNGFHIFKLLGRRAQETPTVIIDQTHARHILIKINELTSENDGKLKILALKDR 325 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 26/274 (9%), Positives = 86/274 (31%), Gaps = 9/274 (3%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAV------QELIVETLKKQEIEKSGITFDSNTVNY 104 +T+G++ + + + + ++A + + + ++++ Sbjct: 163 VTEGEVDNFLQTQEASAVGDDEYRLAHIMILVPENMTADQIQQRAERAEMALTRLREGAE 222 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 F + + + ++ + I ++++ P + + G ++ Sbjct: 223 FSQIVSEFSDAADAKNGGIIEWRPISQMGPAFAQILEALQPGDITSIVQSPNGFHIFKLL 282 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + + + + + + K + ++ R ++ Sbjct: 283 GRRAQETPTVIIDQTHARHILIKINELTSENDGKLKILAL-KDRLDRGESFEEVARLYSE 341 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 S G +L D P F+ ++ ++P +Q G I + ++R + Sbjct: 342 DASASSGGDLGWLSPGDTVPDFERVMNALLPGEISDPVRSQFGWHLIQVMERRTQDISLD 401 Query: 284 LKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K + +++++LR A I Y Sbjct: 402 RRRQTARQAIRTRKADVVIQDWLQQLRDQAYIEY 435 >gi|42521666|ref|NP_967046.1| survival protein SurA precursor [Bdellovibrio bacteriovorus HD100] gi|39574196|emb|CAE77700.1| survival protein SurA precursor [Bdellovibrio bacteriovorus HD100] Length = 307 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 99/305 (32%), Gaps = 16/305 (5%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-------------LEK 74 + + + + + +N E++ + D + + Q + E K Sbjct: 1 MLVATPSHAEIVEKTVAIVNSELVLESDFKDLVKRIPKQGMVDESLLFDKPATSLIGNRK 60 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + LI E + + EI++ + ++ V + AR +S + + + +QG+ + + Sbjct: 61 AQLDYLINEKILQSEIKRLNLAVTNDRVESELKEMARKNQVSEAELAKVIQQQGVSMDDY 120 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 +++L ++ + + K + + K +V + K Sbjct: 121 RRFLKDSIEKRSLMDAEIISKLRISDEDALNEYLKTNPNNRPSIDEFSVSHIFFNPKKGG 180 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKS 253 KR + N ++F+ + + G + L + + Sbjct: 181 AEASIKRAETVLGKLRSGENFENLAQQFSEDPNFSTGGALGTFKSGEFLPEIEEAISSLK 240 Query: 254 QNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 N TT ++ G + + K+ K + AQ ++ +++ R Sbjct: 241 VNETTPIVKSRMGFHIVKLTGKKLTTDPKFERAKDKIKAQLLENSFKRQLKNWLQTKRDE 300 Query: 312 AIIHY 316 + I Sbjct: 301 SFIRI 305 >gi|328542082|ref|YP_004302191.1| peptidyl prolyl cis-trans isomerase D signal peptide protein [polymorphum gilvum SL003B-26A1] gi|326411832|gb|ADZ68895.1| Peptidyl prolyl cis-trans isomerase D signal peptide protein [Polymorphum gilvum SL003B-26A1] Length = 287 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 78/312 (25%), Gaps = 49/312 (15%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK-- 67 S + L + V + + + ++ + + IT+ DI+ L + Sbjct: 4 SILRRPLRSALVAATALTLGVSALQAAEPGD-VVAKVGDAEITEADIAFAAQDLGQELRR 62 Query: 68 -INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 + I + L+ L +GI + + Sbjct: 63 FPPAQWRTILIDVLVDMKLLAGAARAAGIDKEPDFARQV--------------------- 101 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 +L +Q++ + + E++ + + E R +L Sbjct: 102 ---------AFLEMQALRNAYIAREIDAGITEAELKAAYDTEFAGFEGDEEISARHIL-- 150 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP-Q 245 + + + +S G Y + P Sbjct: 151 ---------VASKDEAAELIKKLDEGADFAELATAHSSDGSAAGGGDLGYFTRGQMVPEF 201 Query: 246 FQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P +Q G I + DKR + A I + Sbjct: 202 EAAAFALAAGEHSKEPVESQFGWHVIKVEDKRQQAA--PSFEEVEAGLRQKLIRDIYTKR 259 Query: 305 VKKLRSNAIIHY 316 + +L++ + Sbjct: 260 IGELKAETPVEI 271 >gi|319784426|ref|YP_004143902.1| SurA domain [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170314|gb|ADV13852.1| SurA domain [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 309 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 64/302 (21%), Positives = 123/302 (40%), Gaps = 11/302 (3%) Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78 + +L+ V I A +S I+ +N +T GDI+ R A LKLQ+ G+ A Q Sbjct: 10 FALLVAATSVSITVMAPPAFASEIKYVVNDIPVTTGDIAHRAAFLKLQRKKGD----AGQ 65 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 E+I +TL+ E ++ GI V+ + + A + + ++K G+ +HFK+++ Sbjct: 66 EMIDQTLRMAEAKRLGIRISDAQVDAAYQRFASSNKMQLSQLDGVMEKSGVTKSHFKEFI 125 Query: 139 AIQSIWPDVVKNDFML---KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 Q W + + E ++ + + Sbjct: 126 RAQMAWNQALSARYRSGDGTGAVSEQDLVRKMLEKGGAKPSATEYMLQQVIFVVPAAERS 185 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQ 254 + KR ++A+ R R +FA + DV++ +L L P + + + Sbjct: 186 ATLGKRKREADAMRARFNGCNTT-REFAKGLIDVTVRDLGRVLAPQLPPDWAEQIKATKV 244 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT--PTKIEKHEAEYVKKLRSNA 312 T T++GVE+I IC R++ + + A+ + + +YV +L++ A Sbjct: 245 GGATVTRETERGVEFIGICSSREVSDDKVAQMAFQAEGSGGDKDADALSKKYVDELKAKA 304 Query: 313 II 314 I Sbjct: 305 RI 306 >gi|182677646|ref|YP_001831792.1| hypothetical protein Bind_0653 [Beijerinckia indica subsp. indica ATCC 9039] gi|182633529|gb|ACB94303.1| conserved hypothetical protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 306 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 57/286 (19%), Positives = 117/286 (40%), Gaps = 4/286 (1%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 +V + + I +ING+ IT+ D+ +R+ +L++ + + A++ L + L+ E Sbjct: 21 VVVGSTDVQAQTIIASINGDPITNIDVDERMKMLRVLRKPAT-REAAMESLYTDRLETHE 79 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 + G+ + V+ A+ + E + L G+ +HFK + + +V Sbjct: 80 AARYGVKPKDADIGQEIVRVAQEMKVQPEALIAALQNAGVSPDHFKAHFGADLAFGALVG 139 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 E E+ + + R ++AE+ R Sbjct: 140 A-LNKGVEASETEVRKELARQGGKAAAGTEYTLRQVIFSLPNNVAPAAINARGQEAEQLR 198 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVE 268 R EK ++DV+I +++ +NLL K+ + T P + G+E Sbjct: 199 QRFADC-ESGEKMVFALNDVTIRDPIRRTSTEISEGLRNLLDKTPVGHLTPPQRSSAGLE 257 Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 IA+C K + AL+ +S + T++ A+ +K++R +A+I Sbjct: 258 MIAVCRKGAALDDTALRQQISQKILATRLSADRAKRLKEMRDHAVI 303 >gi|310657790|ref|YP_003935511.1| foldase lipoprotein [Clostridium sticklandii DSM 519] gi|308824568|emb|CBH20606.1| putative foldase lipoprotein (Late stage protein export lipoprotein) precursor [Clostridium sticklandii] Length = 354 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 43/325 (13%), Positives = 104/325 (32%), Gaps = 31/325 (9%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI-------- 68 ++ I + + + A ++ +N I+ D K +A++K Q Sbjct: 4 LLSLIMSSLMIFSLAACSNTASANEWAAKVNDVEISYSDYEKNLAIIKKQIEATVGADIW 63 Query: 69 ----------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 N L+ +++LI + L E +K IT D++ F Q + Sbjct: 64 TQDSGQGKTYNEILKDQVLEKLIEDQLILAEAKKENITVDADEFEKEFTQFKEQVKSLPD 123 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + ++ + KQ ++ K FM K E ++ + Sbjct: 124 YETFLKEEGITDEFLKKQLETDTIVFE--YKEKFMEKNTPSEEDLKKYYDDNQENYNVNE 181 Query: 179 LIRTVLFSIPDN------KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSI 231 + + + + ++K + ++++ V+ Sbjct: 182 VKASHILLKTVDENFVPLPEDKIAEIKKEAEAVLAKVNSGEDFAVLAKEYSQDEASAVNG 241 Query: 232 GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 G + + + +F+++ N ++ T G I + +K+ E+ + Sbjct: 242 GDLGFFAKGVMVKEFEDVAFSLEPNQVSDLVETTYGYHIIKVFEKK---NEVTPFEDVKE 298 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIH 315 +K ++V L+ +A I Sbjct: 299 NIKNELAQKSYLDFVASLKESAKIE 323 >gi|270157914|ref|ZP_06186571.1| chaperone SurA [Legionella longbeachae D-4968] gi|289163812|ref|YP_003453950.1| peptidyl-prolyl cis-trans isomerase SurA [Legionella longbeachae NSW150] gi|269989939|gb|EEZ96193.1| chaperone SurA [Legionella longbeachae D-4968] gi|288856985|emb|CBJ10799.1| putative peptidyl-prolyl cis-trans isomerase SurA [Legionella longbeachae NSW150] Length = 431 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 37/316 (11%), Positives = 104/316 (32%), Gaps = 17/316 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK------- 67 + ++ IF V + ++ M ++ +N VIT+ +++K++ L K Q Sbjct: 1 MYKKIALICIFFSVVMGIAQAKQMLDKVVAVVNDGVITESELNKQVELSKKQILAQKMQL 60 Query: 68 -INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 L K +Q LI L+ Q +K+G+T D +N + A ++ + + Sbjct: 61 PEESVLRKQVLQHLIDVDLQLQMAKKNGLTVDDTELNQAIEKIASANHVTLTQLREEIVR 120 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----KNITVREYLIRT 182 QG+ + +++ + + + + + ++ + + + Sbjct: 121 QGMSWDEYRENIRKEMLLSHLQQKAVGRDAMVTSEQVEQYLKTEGGIVDRSALTYRIQNI 180 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 V+ + + + + + + + +S + G +++ Sbjct: 181 VIPLGEEPTSEQVKKAKNKAELLLSKIKKGDDFSRLAIENSSGEFALEGGDLGERHLAEI 240 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG----GEIALKAYLSAQNTPTKI 297 F + ++K P G + I + ++ + P + Sbjct: 241 PELFAKEVVKMKVGQVAGPLRAGNGFQLIKLVSIGGENQHHIITKTHVRHILLKPDPNML 300 Query: 298 EKHEAEYVKKLRSNAI 313 + + V+ + Sbjct: 301 PEDAKKQVRNIYQQIK 316 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 31/274 (11%), Positives = 81/274 (29%), Gaps = 8/274 (2%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 +T + + + L +I + + + + + Sbjct: 152 VTSEQVEQYLKTEGGIVDRSALTYRIQNIVIPLGEEPTSEQVKKAKNKAELLLSKIKKGD 211 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML-----KYGNLEMEIPA 165 + L+ E+ S +G + +VVK + GN I Sbjct: 212 DFSRLAIENSSGEFALEGGDLGERHLAEIPELFAKEVVKMKVGQVAGPLRAGNGFQLIKL 271 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-S 224 +N + + +K++++ + ++++ Sbjct: 272 VSIGGENQHHIITKTHVRHILLKPDPNMLPEDAKKQVRNIYQQIKAGKDFALMAKQYSLD 331 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 V G ++ L P+F+ + K + N + P +Q G I + ++ A Sbjct: 332 SASAVKGGDLGWVSPGVLVPEFEKAMDKLAINEISPPVKSQFGWHLIQVLGRKQEDDSEA 391 Query: 284 LK-AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + K + + + +R++A ++ Sbjct: 392 FKVQKVRQFLQQRKFAEAVQNWQQHIRTDAYVNI 425 >gi|119355885|ref|YP_910529.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium phaeobacteroides DSM 266] gi|119353234|gb|ABL64105.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium phaeobacteroides DSM 266] Length = 438 Score = 107 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 95/297 (31%), Gaps = 14/297 (4%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71 K+LT +++ + ++ RI + EVI +I R + +Q + Sbjct: 3 KMLTAAVFVMLVAFSFTLGNLHADVADRIVAVVGNEVILKSEIDDRALMTVMQYPETQKD 62 Query: 72 --LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 L++ + +I + + + D +T++ + + + +K G Sbjct: 63 TRLKEKILAGIIDQKVILVKARIDSTQVDESTLDALTNERLKMLASRFASKEAMEEKFGK 122 Query: 130 GDNHFKQYLAIQSIWPDVVK-----NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 +Q + + +++ + + E K + V E + + + Sbjct: 123 SMGVIRQEIRNELKDQQLIETLRKKQLAGITVTHEETVDFYRNHKQQLPQVSELVGLSQI 182 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLH 243 PD ++ ++K + K++ G Y+ + +L Sbjct: 183 LKYPDLPQGSKDAALAQMKIVQAELKAGADFAATARKYSQDPGSAKLGGDLGYVQKGELV 242 Query: 244 PQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 F++ ++ T+ G I +K+ ++ +K ++ Sbjct: 243 RSFEDAAFLLKDGKISDIVETRYGYHIIQRLEKKP---NAVHLRHILIAYDQSKTDE 296 Score = 37.0 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 16/169 (9%), Positives = 46/169 (27%), Gaps = 17/169 (10%) Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + + +R +L + +K G VQ + + + +K++ Sbjct: 267 YHIIQRLEKKPNAVHLRHILIAYDQSKTDEPGTVQLLSRIKSDVLAGRATFADMAKKYSD 326 Query: 225 KIHDVSIGKA---QYLLESDLHPQFQNLLKK-------SQNNTTNPYVTQKG-----VEY 269 +G ++ L + + ++P Sbjct: 327 DPVSGKLGGVILSGGSGKTLLPVASLRPQMMQIVGSLRNIGDISDPQKIDFQKGNLFYGI 386 Query: 270 IAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K + + Y L K ++ E++ +L+ ++ Sbjct: 387 FQLNAKIPVHQLNLEQDYASLEELALEAKKQERYNEWLSQLKKEVLVRI 435 >gi|261338952|ref|ZP_05966810.1| hypothetical protein ENTCAN_05153 [Enterobacter cancerogenus ATCC 35316] gi|288318779|gb|EFC57717.1| peptidylprolyl cis-trans isomerase SurA [Enterobacter cancerogenus ATCC 35316] Length = 428 Score = 107 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 104/311 (33%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGEL 72 +L+ +V S+ + + ++ +N V+ + D+ + +KL + L Sbjct: 7 LLLGVAMVANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMKSVKLNSGEAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L GI Sbjct: 67 RHQILERLIMDQIVLQMGQKMGVKISDEQLDQAIANIAKQNNMTPDQMRSRLAYDGISYA 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPD 189 ++ + + + +V N+ + L E+ + + L ++ + Sbjct: 127 TYRNQIRKEMLISEVRNNEVRRRVTILPQEVDALAKQVGNQNDASTELNLSHILIPLPEN 186 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + + E +++ + G+ + +L F Sbjct: 187 PTSDQAAEAESQARSIVEQARNGGDFGKLAITYSADQQALKGGQMGWGRIQELPSLFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P + Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQNISVTEVHARHILLKPSPIMTDDQARAK 306 Query: 305 VKKLRSNAIIH 315 ++++ +A I Sbjct: 307 LEQI--SADIK 315 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 92/288 (31%), Gaps = 25/288 (8%) Query: 47 NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 N EV I ++ + Q L + E S ++ + Sbjct: 143 NNEVRRRVTILPQEVDALAKQVGNQNDASTELN-----LSHILIPLPENPTSDQAAEAES 197 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 V+ ARN G + ++ Q + IQ + + Sbjct: 198 QARSIVEQARNGGDFGKLAITYSADQQALKGGQMGWGRIQELPSLFAQALSTAKKGDIVG 257 Query: 152 -FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 G +++ + + +NI+V E R +L +Q K + + + + Sbjct: 258 PIRSGVGFHILKVNDLRGQSQNISVTEVHARHILLKPSPIMTDDQA-RAKLEQISADIKS 316 Query: 211 RLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVE 268 N ++F+ G + P F++ +K S+ + P + G Sbjct: 317 GKTSFANAAKEFSQDPGSANQGGDLGWAAADIYDPAFRDALMKMSKGQISAPVHSSFGWH 376 Query: 269 YIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + D R++ + A K K + A ++++ R++A + Sbjct: 377 LIELLDTRNVDKTDAAQKDRAYRMLFNRKFSEEAATWMQEQRASAYVK 424 >gi|254459474|ref|ZP_05072890.1| ppic-type ppiase domain protein [Rhodobacterales bacterium HTCC2083] gi|206676063|gb|EDZ40550.1| ppic-type ppiase domain protein [Rhodobacteraceae bacterium HTCC2083] Length = 281 Score = 107 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 81/306 (26%), Gaps = 50/306 (16%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69 + T + + + + + ++ T+NG IT G + + L Q N Sbjct: 1 MLKRTPFLASVAAVTLLALPLSAETGIDQVVATVNGTDITMGHMIVVRSGLPDQYRNLPD 60 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 L K + ++I +T+ A+ G + + L+ + Sbjct: 61 DVLFKGILDQVIQQTILA----------------------AQAGGDTPDRVRLALENE-- 96 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + + + + K + RE+ +L D Sbjct: 97 ---------RRALMAAEHMDVVLADAVTEDAVAAAYEKTYAGAVPEREFDASHILVETED 147 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 ++ ++ G + + P+F+N Sbjct: 148 EAKA-----------LVTDLDGGADFAELAKEKSTGPSGPRGGALGWFGTGQMVPEFENA 196 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + P TQ G I + D R + + A + Y+ KL Sbjct: 197 VKDMEVGAVSTPIKTQFGWHVIKLNDTR--SEDAPKIDDVRADLEQQVRMETVDAYIAKL 254 Query: 309 RSNAII 314 A I Sbjct: 255 TEGATI 260 >gi|154246774|ref|YP_001417732.1| putative peptidyl-prolyl cis-trans isomerase SurA [Xanthobacter autotrophicus Py2] gi|154160859|gb|ABS68075.1| putative peptidyl-prolyl cis-trans isomerase SurA [Xanthobacter autotrophicus Py2] Length = 303 Score = 107 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 63/282 (22%), Positives = 117/282 (41%), Gaps = 5/282 (1%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 A + +I +NG+ IT D+S+R + ++ + + A+++LI E +K Q+ + + Sbjct: 23 PAQAQQIIVMVNGDPITTFDVSQRQLMHQMIERKSVSAQQALEDLIDERIKIQQAIRLKM 82 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + V+ + A +G + E + +QG+ D FKQ L +W V+ Sbjct: 83 EVEQKDVDRLYASVAERSGRTPEQLTEGFKQQGLNDRTFKQKLFADYVWGQYVRAR---S 139 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + K + L I +N G R+ +A R R Sbjct: 140 GTVNVRDADVVAALQKRGETQMIATEYTLMPIVFVVPRNAGNYAARLAEANALRGRFTDC 199 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICD 274 + + + +V + L S++ PQ + + K T P V Q GVE AIC Sbjct: 200 -DAGAQTVKSLKEVVVRPKVTRLSSEMPPQLRQILDKTEIGRLTPPEVAQSGVETFAICG 258 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 KR++ GE A K + + + + +++ +LR ++I Y Sbjct: 259 KREVRGESAQKKEIKDELSNAQFAAESKKFMAELRKQSLIEY 300 >gi|329850880|ref|ZP_08265725.1| PPIC-type PPIASE domain protein [Asticcacaulis biprosthecum C19] gi|328841195|gb|EGF90766.1| PPIC-type PPIASE domain protein [Asticcacaulis biprosthecum C19] Length = 445 Score = 107 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 99/263 (37%), Gaps = 8/263 (3%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL-------QKINGELEKIAVQELIV 82 + +S + ++N ++IT D+ +R+ LL + Q+ ++ A+ L+ Sbjct: 47 APAPNLPQLSEGMLISVNDDMITSYDLKQRMLLLIVTSGVQVTQENYAAFQQQAINGLVD 106 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E L+ QE++ + D +N + A +GL+ E + L K GI K + ++ Sbjct: 107 ERLQMQELDHWKVKVDDADINEELERMASQSGLTGEQLLTELKKVGIEPATLKSQIRAET 166 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 W +V + ++ ++ ++ + +F P + + Sbjct: 167 GWSRLVGGRYQSNAKVGSAQVDGTMDRIVADGQKQQYLVAEIFLDPAQAGGIENAQKGAQ 226 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPY 261 + + + R +F++ G A +L+ +L P + T P Sbjct: 227 QLYNQLQARAAPFQAVARQFSNAPSAAQGGDAGWLVADNLDPAIEVALAAAQPGEMTPPI 286 Query: 262 VTQKGVEYIAICDKRDLGGEIAL 284 T+ GV + K G++ + Sbjct: 287 TTEDGVYIYLLRQKTTGDGDMVM 309 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 45/156 (28%), Gaps = 1/156 (0%) Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 E ++ T + + L N + + R Sbjct: 289 EDGVYIYLLRQKTTGDGDMVMHLKQAAIPLAPNASESEVANAQSALLSFRSKVSSCDALD 348 Query: 222 FASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 A ++ + S L L + P + + + +CD+R G Sbjct: 349 EAKVPGNIQVVDLGEAQLSTLLPDYVATLKPLKGKQVSQPVRNSQFMNVVYVCDRRLAGE 408 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + +Q T++ Y+++LR +A I Sbjct: 409 NALTREQVESQLVNTRLAMLGKRYLRELRGSATIEN 444 >gi|261823065|ref|YP_003261171.1| peptidyl-prolyl cis-trans isomerase SurA [Pectobacterium wasabiae WPP163] gi|261607078|gb|ACX89564.1| Peptidylprolyl isomerase [Pectobacterium wasabiae WPP163] Length = 431 Score = 107 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 101/309 (32%), Gaps = 16/309 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ + ++ + + ++ ++ V+ + D++ + +KL L Sbjct: 7 LILGLALSASTAFAAPQVVDKVAAVVDNSVVLESDVNSLLQSVKLNAQQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 LI++ + Q +K GI ++ A +S + S L +G+ N Sbjct: 67 RHQITDRLIMDNIILQMAQKMGIQVTDEQLDQAITNIAAQNRMSLDQLKSQLAYEGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L E+ +++ N T + IP + Sbjct: 127 TYRNQIRKEMLISEVRNNEVRRRVTVLPQEVDTLAKQIANQTGENDELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDA---EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 Q V + A + ++S + G+ + ++ F + Sbjct: 187 PTQQQVDEAENLATSLVKQISEGADFGKLAITYSSDSQALKGGQMGWGKLQEIPTLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 L + + P + G + + D R + ++ + + + Sbjct: 247 LTQAQKGQVVGPIRSGVGFHILKVNDIRGGNKSVSVTETHARHILIKPSVVMTDSQAQAK 306 Query: 305 VKKLRSNAI 313 + + Sbjct: 307 LADVAQQIK 315 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 55/167 (32%), Gaps = 4/167 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + K+++V E R +L +Q K A++ + Sbjct: 259 IRSGVGFHILKVNDIRGGNKSVSVTETHARHILIKPSVVMTDSQAQ-AKLADVAQQIKNG 317 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEY 269 + + + G + P F++ L K + + P + G Sbjct: 318 STDFAAQAKLLSQDPGSANQGGDLGWASPDMYDPAFRDALLKLKKGEISQPVHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + D R + + A K K + ++++ R+ A + Sbjct: 378 IQLLDTRQVDKTDAAQKEQAYRMIFNRKFAEEAQTWMQEQRAAAYVK 424 >gi|196230321|ref|ZP_03129184.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chthoniobacter flavus Ellin428] gi|196225918|gb|EDY20425.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chthoniobacter flavus Ellin428] Length = 319 Score = 107 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 99/319 (31%), Gaps = 18/319 (5%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-----------RIAL 62 L ++ I + + ++ + I +N +V+T + + + Sbjct: 4 SRLIPLSLVCIGLAISTFTARAQEVLDGIAAVVNSDVVTFSQVRELVGPKEKQAHETLKG 63 Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN-TGLSAEDFS 121 +L + E+ A+ +LI L QE + G T ++ ++ G + F Sbjct: 64 QELVEKIKEIRTEAINDLIDRALIIQEFKTKGYTIPDYFIDDRIQGIIKDEFGNDRQAFL 123 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 L Q F+ I ++ K + +I A ++ + ++ Sbjct: 124 RTLAAQNYTLEKFRDLQKDMIIVSEMRKQAVKGATSVPDAKITAYYKEHLEEYSQPEQMK 183 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + + +K I + + + + + ++ G ++ Sbjct: 184 LR---MIAIRGVENDSRRKMIDEIRQKIVGGAEFGDLARMYSEDSSQEQYGDWGWIDRKK 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIE 298 L+ + + + K+ + + + T+ + Sbjct: 241 LNESLTKTAFSLKPGEMSQVVELGGSYYLLYCEAKKPATVKPLKDVHDEIEKVLLQTERQ 300 Query: 299 KHEAEYVKKLRSNAIIHYY 317 + +A+++ KLR A I Y Sbjct: 301 QQQADWLAKLRRKAYIKMY 319 >gi|325292484|ref|YP_004278348.1| survival protein surA precursor / peptidyl-prolyl cis-trans isomerase SurA [Agrobacterium sp. H13-3] gi|325060337|gb|ADY64028.1| putative survival protein surA precursor / peptidyl-prolyl cis-trans isomerase SurA [Agrobacterium sp. H13-3] Length = 315 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 76/292 (26%), Positives = 145/292 (49%), Gaps = 7/292 (2%) Query: 28 VPIVSYKSWAMSSRIR-TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLK 86 + + + S A + +N IT+ DI++R+A LKLQ+ +G L + A ++L+ E LK Sbjct: 23 MAVAPFASQAFADSTVKIVVNKTPITNDDIARRVAFLKLQRQSGNLAEKAREQLVDEALK 82 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 ++EI + ++ + V+ F + A N ++ + + L K G+G +HFK ++A+Q WP Sbjct: 83 REEIGRVKMSVSTQEVDAAFARFAANNKMNPQQLTQILSKAGVGADHFKAFIAVQMSWPR 142 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 +V + + ++ ++ + V + + +N KR +AE Sbjct: 143 LVNARYGARGKMSNQDLVTRLRERGDKPVTTEYFLQQVIFVIPESKRN-AITGKRKAEAE 201 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQK 265 SR R P ++ FA+ + DV+I +L +L +++ + K + TT VT+K Sbjct: 202 ASRKRYPGC-DQAMTFAATMRDVAIKDLGRILAPELPEEWKPLVEKTKEGGTTGTRVTEK 260 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKI---EKHEAEYVKKLRSNAII 314 GVEY+AIC +R + + A + +++ +E +Y+ +LR A I Sbjct: 261 GVEYLAICKQRQVSDDYAAEMVFKSEDLMKAKGGENPNEKKYMDELRKKAQI 312 >gi|167622857|ref|YP_001673151.1| SurA domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167352879|gb|ABZ75492.1| SurA domain [Shewanella halifaxensis HAW-EB4] Length = 434 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 35/310 (11%), Positives = 103/310 (33%), Gaps = 15/310 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 +K +I + + + R+ IN +I + +++ + ++ N Sbjct: 1 MKRCNQLIFALITLAMSQTIHAAPEPLDRVTVQINEGIILESEVTGMVKTIRANAANAGQ 60 Query: 71 ------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L ++ LI+ L+ Q ++ G+ ++ A+ ++ + + Sbjct: 61 KLPSDTALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQTIENIAKEQKMTVAQMKAQI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + +G +++ L + ++ + + EI + + + ++E + Sbjct: 121 ESEGTTFAQYREQLREEITLGEIQRIQVQRRIQVSPQEINSLVKLINEQGLKEVEFQIGH 180 Query: 185 FSIPDNKLQNQGFVQ---KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I N ++ KR + + +S + G Y+ ++ Sbjct: 181 ILIDVPSDANSQQLEAASKRAAVVMKRLKDGDDFRSIAIAASSGPKALEGGIWDYMNINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTKI 297 + F + + + P + G I + D R L + + ++ + +P Sbjct: 241 MPTLFAEVVTDAKTGDIIGPIKSASGFHIIKVMDARGLETKEVKEVKSRHILLKPSPILS 300 Query: 298 EKHEAEYVKK 307 E+ + + Sbjct: 301 EERAKSMMDR 310 Score = 79.3 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 30/294 (10%), Positives = 76/294 (25%), Gaps = 27/294 (9%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI------------T 96 E IT G+I + ++Q E+ + LI E K+ + G Sbjct: 136 EEITLGEIQRIQVQRRIQVSPQEINSLVK--LINEQGLKEVEFQIGHILIDVPSDANSQQ 193 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK- 155 ++ + V G + + P + Sbjct: 194 LEAASKRAAVVMKRLKDGDDFRSIAIAASSGPKALEGGIWDYMNINEMPTLFAEVVTDAK 253 Query: 156 -------YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + + +E + K + D + Sbjct: 254 TGDIIGPIKSASGFHIIKVMDARGLETKEVKEVKSRHILLKPSPILSEERAKSMMDRFLT 313 Query: 209 RLRL--PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 +++ K + +++ G+ + + P F L + P+ + Sbjct: 314 QVKSGEAKFEDLARQYSEDPGSAAKGGELGWADPNIYVPAFAQELNSLEIGGYSEPFRST 373 Query: 265 KGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + + ++R + K + ++ ++R+ A I + Sbjct: 374 HGWHIVQLEERRTTDATDKFNTNRAHQLIYRRKFNEELQNWLDEMRAEAFIDIF 427 >gi|194335197|ref|YP_002016991.1| SurA domain [Pelodictyon phaeoclathratiforme BU-1] gi|194307674|gb|ACF42374.1| SurA domain [Pelodictyon phaeoclathratiforme BU-1] Length = 438 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 90/277 (32%), Gaps = 14/277 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS---RIRTTINGEVITDGDISKRIALLKLQKI--- 68 + + + + S ++ A++ RI + EVI +I R + ++Q Sbjct: 1 MKKVFGKAALLLFIGSSSLQAPAIADMADRIVAVVGNEVIFKSEIDSRELMARMQYPELT 60 Query: 69 -NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 N L + + LI + + + + ++ D N+++ + R G + + Sbjct: 61 KNNGLSRSILDGLIDQKIILAKAKIDSVSIDENSISSAASERFRELGTKFTSKADMESRL 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLK-----YGNLEMEIPANKQKMKNITVREYLIRT 182 G + + + +V K E+ + K + + E + + Sbjct: 121 GKSSAGILEGIRQELRNQQLVDTLRRKKSAGVTVSYDEVMAFYSANKEQIPQIPEEVSVS 180 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD 241 + P + + ++ +++ S G ++ + Sbjct: 181 QILKYPPVSAEEKAQSLATMERIRTEIKGGADFAAMARQYSQDPGSAQSGGDLGFVAKGQ 240 Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277 L P F+N ++ ++ T+ G I + K Sbjct: 241 LIPSFENAAYALNEGKISDIVETRYGYHLIQLLSKEP 277 Score = 39.7 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 28/285 (9%), Positives = 74/285 (25%), Gaps = 20/285 (7%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 G ++ ++ + K Q ++ + I++ EK+ + Sbjct: 151 GVTVSYDEVMAFYSANKEQIP--QIPEEVSVSQILKYPPVSAEEKAQSLATMERIRTEIK 208 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 A ++ + Q GD F + + + K ++ Sbjct: 209 GGADFAAMARQYSQDPGSAQSGGDLGFVAKGQLIPSFENAAYALNEGKISDIVETRYGYH 268 Query: 168 -QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 ++ + +R +L ++ + + +K++ Sbjct: 269 LIQLLSKEPNSIHVRHILIGFDRKSGDFSSVTRQLNAVRADVLGGKETFADMAKKYSEDP 328 Query: 227 -HDVSIGKA-------QYLLESDLHPQFQN--LLKKSQNNTTNPYVT--QKG---VEYIA 271 G L PQ Q + + + +G Sbjct: 329 ASAAQGGTILLSGSSNPLFSPLALRPQLQQILSTLQKSGDISEVQKIDPPQGEPFYAIYR 388 Query: 272 ICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKLRSNAII 314 + ++ K Y L K ++ ++V++LR + Sbjct: 389 LNERIPAHKLNTEKDYAYLEELALADKNQQIFIKWVEQLRKEVYV 433 >gi|326798883|ref|YP_004316702.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingobacterium sp. 21] gi|326549647|gb|ADZ78032.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingobacterium sp. 21] Length = 464 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 98/307 (31%), Gaps = 14/307 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +K LI + + + ++ + G +I DI + A + + Sbjct: 1 MKKFAGLLTLIFLACAGALRAQDVQVIDKVAAVVGGNIILQSDIEMQYAQYLSEGNRADP 60 Query: 72 -LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 ++ + +++L+ L Q+ I + V+ R A Sbjct: 61 GVKCMILEQLLTNKLLTQQAAIDSIEVTEDEVDDNINNRLRYMTRQAGGQEQLEKFLNRS 120 Query: 131 DNHFKQYLA---IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 +K+ + + + ++ K G +E+ +K+ ++ Y + I Sbjct: 121 LLQYKEEMRPAVKEQLIAQKMQAKITEKTGITPLEVKRYFEKIPKDSLPNYNTEVEVGEI 180 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKI-HDVSIGKAQYLLESDLH 243 + Q AE R+ + + ++ S G + S + Sbjct: 181 VVFPKLTKEEKQPFYDRAESLRMGIKAGDDFGTMARLYSQDPGSASSGGDLGFFDRSSMV 240 Query: 244 PQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT-PTKIEKHE 301 +F ++ + +N + ++ G ++ + ++R GE ++ + + Sbjct: 241 KEFTSVAFRLKPGEISNVFESEYGFHFLQVLERR---GEQVRARHILIGVKPNEQSMERA 297 Query: 302 AEYVKKL 308 + + + Sbjct: 298 KKQIDSI 304 Score = 40.4 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 25/286 (8%), Positives = 75/286 (26%), Gaps = 20/286 (6%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 IT ++ + + + ++ V E++V +E ++ + Sbjct: 151 ITPLEVKRYFEKIPKDSLPNYNTEVEVGEIVVFPKLTKEEKQPFYDRAESLRMGIKAGDD 210 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 T G F + ++ + E E + ++ Sbjct: 211 FGTMARLYSQDPGSASSGGDLGFFDRSSMVKEFTSVAFRLKPGEISNVFESEYGFHFLQV 270 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDV 229 + R +L + N+ + ++ + + ++ ++ Sbjct: 271 LERRGEQVRARHILIGVKPNEQSMERAKKQIDSIYTQVKDNKIPFSTAAALYSGDEMTKY 330 Query: 230 SIGKA----------QYLLESDLHP-QFQNLLKKSQNNTTNPYVTQK------GVEYIAI 272 + G Y+ L F + + P+ G ++ + Sbjct: 331 NGGMMLNAMNQQTRTTYIPVDQLDAADFSAIDTLKAGEYSKPFAFSDPQTKKEGYRFLYL 390 Query: 273 CDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + K + K+ + +E+ ++ R I Sbjct: 391 KSRTEPHRASLEKDYAKIKELAEADKLNRVVSEWFEERRKTTYIRI 436 >gi|260366277|ref|ZP_05778733.1| peptidyl-prolyl cis-trans isomerase D [Vibrio parahaemolyticus K5030] gi|308114046|gb|EFO51586.1| peptidyl-prolyl cis-trans isomerase D [Vibrio parahaemolyticus K5030] Length = 555 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 42/406 (10%), Positives = 103/406 (25%), Gaps = 92/406 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY ++ + I G+ Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYLVNGSNNS-AAKVGNTEIPRGEFEMAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + +I + L Q+ E G+ V Sbjct: 60 QNERNRMQAQLGDYFSQMLADPAYVESFRKSVLDRMINDVLLDQQAEALGLRISDAQVRS 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 Q N E + + L + G + F +Y+ + + ++ Sbjct: 120 MILEMPQFQSNGQFDQEIYQASLRRAGFSPDSFAEYMRRELVREQLLTALQSSEFTLPGE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +F K + EI A + + R ++ + Sbjct: 180 VQSQGKLFTQTRDIRTVTIDLAEFAKKVELTDEEIQAYYKANPDNFTRPEQVKVSYVELS 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 L+ Q V + + + + Sbjct: 240 AEALKKQIQVTDEDVKKYYDEHLDKYSSEEQRRVAHILVEGDDEAKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ K+ + + + G I + Sbjct: 300 AAVAQEKSDDFGSAENGGDLGWIERDVMDPAFEEAAFALKNPGDMSGLVKSDFGYHIIKL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +D + A + + K E +L A Y Sbjct: 360 EELKDAVAKPFDEVAAEIKQELVDQKAVDQFYELQNELERVAF-EY 404 >gi|20808913|ref|NP_624084.1| parvulin-like peptidyl-prolyl isomerase [Thermoanaerobacter tengcongensis MB4] gi|46396955|sp|Q8R760|PRSA_THETN RecName: Full=Foldase protein prsA; Flags: Precursor gi|20517573|gb|AAM25688.1| Parvulin-like peptidyl-prolyl isomerase [Thermoanaerobacter tengcongensis MB4] Length = 306 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 95/311 (30%), Gaps = 20/311 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKS--WAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70 ++ F+ +IF V +VS S A+S + +NGE IT+ + + +K Q + Sbjct: 1 MRRKIALFLALIFVGVSLVSCSSKKEAVSGDVVAVVNGEKITNAEYQQIFEQVKEQIESA 60 Query: 71 ELEKIAV--QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + Q+ + E + + + + T E + ++ Sbjct: 61 PTYTKDIWNQDYQGKKFLDFVKENVLDSLVAQKLLVQEAKKKNITVTDKEVEEEYNKEKQ 120 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K+ + + ++ ++ + E+ + K ++ Sbjct: 121 FNSKVTKEQIREYLLIDKLL-AEYTKDVKVTDEELKKYYDEHKESFEVMRARHILV---- 175 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQ 247 +K +D + ++ ++++ + G + P+F+ Sbjct: 176 --------ADEKTAEDIYQRLMKGEDFAALAKEYSIDTATKDNGGDLGEFPHGVMVPEFE 227 Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 + P TQ G I + +K + + K K E Sbjct: 228 EAAFSLKLGEISKPVKTQYGYHIIKSEGI-TVKPFDEVKGTIESYLLNDKKNKVIKEKYD 286 Query: 307 KLRSNAIIHYY 317 +L + I + Sbjct: 287 ELVKASKIQKF 297 >gi|83591735|ref|YP_425487.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodospirillum rubrum ATCC 11170] gi|83574649|gb|ABC21200.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodospirillum rubrum ATCC 11170] Length = 308 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 84/307 (27%), Gaps = 52/307 (16%) Query: 20 FVLIIFCIVPIVSYKS-WAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------GEL 72 L +P+ + + A + +NG + + +R A L+ + + Sbjct: 9 LALAGVLALPLFAGPALAADPDPVVAVVNGADVHLSAVQERFAELQASQPQLGGLPLAMV 68 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + ++ L + K+G+ D + Sbjct: 69 YEQLLNSVVEAELVTEAGRKAGLANDPEVKHRL--------------------------- 101 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 L + I ++ + ++ N+ K + +E R +L Sbjct: 102 ---DRLLDRLIAGAYMQKVVDEDVTDAAVKARYNEMKAEFKPEKEVHARHIL-------- 150 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLK 251 + KDA + + ++ + G + + + F + Sbjct: 151 ---LETEDAAKDAIKKIEGGADFTKLASELSTGPSAQTGGDLGFFTKDRMVAPFAEAAFA 207 Query: 252 KSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + P T+ G I I + RD + + + V L+ Sbjct: 208 MKVGEVSKAPTKTEFGWHVIKIEEVRDTTF--PPVEEMESHIRDELANAAVEKNVAGLKE 265 Query: 311 NAIIHYY 317 +A + + Sbjct: 266 SAKVKLF 272 >gi|290474826|ref|YP_003467706.1| peptidyl-prolyl cis-trans isomerase (PPIase), involved in maturation of outer membrane proteins [Xenorhabdus bovienii SS-2004] gi|289174139|emb|CBJ80926.1| peptidyl-prolyl cis-trans isomerase (PPIase), involved in maturation of outer membrane proteins [Xenorhabdus bovienii SS-2004] Length = 416 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 38/277 (13%), Positives = 92/277 (33%), Gaps = 17/277 (6%) Query: 52 TDGDISKRIALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + D+ +++ +KL L ++ LI++ + Q ++ IT ++ Sbjct: 20 LESDVDEQLQSVKLSAKHAGQQIPDEKALRHQILERLIMDDIILQMAKQMQITIPDQVLD 79 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 A + ++ L +G+ N ++ + + I +V N+ + L E+ Sbjct: 80 STIANIAAQNHMGLDELKKNLTAEGLNFNTYRNQIRKEMIIAEVRNNEIRRRVTILPQEV 139 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LE 220 A + + + + + IP + +Q V+K + L + Sbjct: 140 EALAKNLSSENNQNTELNVSNILIPLRENPSQAQVEKATAIINKILSELKNGADFGKLAI 199 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR--- 276 ++ + G + +L F L+ + P + G + I D R Sbjct: 200 TYSGDTQALKGGNMGWRKLQELPSLFAEQLQSAHKGQIIGPIRSGVGFHILKINDIRGSN 259 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + ++ + +P + + KLR Sbjct: 260 MPQVAATEVNARHILLKTSPIMTDDQARSTLMKLREE 296 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 84/304 (27%), Gaps = 17/304 (5%) Query: 28 VPIVSYKSWAMSSRIRTTI-NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELI 81 + +Y++ I + N E+ I ++ L + E LI Sbjct: 105 LNFNTYRNQIRKEMIIAEVRNNEIRRRVTILPQEVEALAKNLSSENN-QNTELNVSNILI 163 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + + T N + A L+ +G K Sbjct: 164 PLRENPSQAQVEKATAIINKILSELKNGADFGKLAITYSGDTQALKGGNMGWRKLQELPS 223 Query: 142 SIWPDVVKND-------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + G ++I + + + + + Sbjct: 224 LFAEQLQSAHKGQIIGPIRSGVGFHILKINDIRGSNMPQVAATEVNARHILLKTSPIMTD 283 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKK 252 +K EE EK++ + G+ + + S P F++ +K Sbjct: 284 DQARSTLMKLREEILSGKTTFNAAAEKYSEDPGTAMRGGELGWNVPSTYAPAFRDALVKL 343 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + P + G I + D R + + A K K+ + +++ LR++ Sbjct: 344 KKGELSQPVHSTFGWHLIQLIDTRKVDRTDSAQKDNAYRLLLNRKLGEETQNWMQDLRAS 403 Query: 312 AIIH 315 A + Sbjct: 404 AYVK 407 >gi|197119425|ref|YP_002139852.1| PpiC-type peptidylprolyl cis-trans isomerase [Geobacter bemidjiensis Bem] gi|197088785|gb|ACH40056.1| peptidylprolyl cis-trans isomerase, PpiC-type [Geobacter bemidjiensis Bem] Length = 325 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 39/324 (12%), Positives = 97/324 (29%), Gaps = 24/324 (7%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS-------RIRTTINGEVITDGDISK------- 58 ++++ T L+ C + + + +I +N I I Sbjct: 1 MQVMKTIICLLTACALSLAGNQPAWAEPIAEEKGLQIAARVNDRPIYYHQIKANVERTLA 60 Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 + L K++ ++ K ++ I + + + ++G + L + Sbjct: 61 KYKRLGAAKVSDDVRKQVQKDEINRQVDMELLVQAGEKLKQTDLEKKMEALLS---LKSP 117 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 S+ K + ++ L + + + E ++ + Sbjct: 118 QGSTSAKKDESKEKEMREQLRRNLLAESYLIQRGIQDVRVPEEDLKRFYKDNSAKFTVPE 177 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL----PKDCNKLEKFASKIHDVSIGKA 234 ++ I NK + + + R + ++ +S G Sbjct: 178 AVKASHIMITVNKKATPEEIAQANAKIVKVREEVLQGKKSFEELAKEHSSGDSASKGGDL 237 Query: 235 QYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQ 291 Y+ + P+F + + ++ T+ G I + DK+ + +K L Sbjct: 238 GYINPQFMPPEFDKVAFQLKVGEVSDVVKTKFGFHVIKVFDKKPSRVQEFAEVKGLLEKF 297 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIH 315 E+ E +LR +A I Sbjct: 298 LLNQYQERKRTEIAMELRRDARIE 321 >gi|221639318|ref|YP_002525580.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides KD131] gi|221160099|gb|ACM01079.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides KD131] Length = 405 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 107/305 (35%), Gaps = 7/305 (2%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT---TINGEVITDGDISKRIALLKLQKIN 69 +K ++ + ++ + A++ + +N VIT+ + +R+ L + Sbjct: 1 MKTFVSHCLALVVAAGLTFTSAPGALAQNLFAPRLVVNDRVITNYEFEQRVRFLTILGAT 60 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 G++EK A+ LI + ++ E++G+ + + A LSAE F++ L K G+ Sbjct: 61 GDVEKQAMDALIEDKIRFYAAEQAGLKATEEQIKEGMEEFAGRANLSAEQFAAELGKAGV 120 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 F+ ++ IW ++++ F E I + + L+ ++ P Sbjct: 121 AVETFRDFVHAGLIWRELMRAKFGAVARPTETAIDRAITRQTSRASIRLLLSEIIIPAPP 180 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + I+ +++ G+ ++ +L P + Sbjct: 181 GQEAEAQALAAEIRRNVRGEGAF---AEAARTYSASSSAERGGRIDWVPLQNLPPTLGPM 237 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 L S ++P V + + + L + A + ++ Sbjct: 238 LLTLSPGQVSDPVKIPNAVALFQLRGRDESSAPPPEGIELEYAELFLPNDAEFAAELGRI 297 Query: 309 RSNAI 313 S A Sbjct: 298 TSRAD 302 Score = 40.8 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 20/46 (43%) Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + +C +R + E + L+ I Y+ LR+NAII Sbjct: 357 VLMLCARRPVSAEPIDRGRLAQALANQSISASADAYMADLRANAII 402 >gi|85710398|ref|ZP_01041462.1| peptidyl-prolyl isomerase [Erythrobacter sp. NAP1] gi|85687576|gb|EAQ27581.1| peptidyl-prolyl isomerase [Erythrobacter sp. NAP1] Length = 448 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 95/283 (33%), Gaps = 15/283 (5%) Query: 44 TTINGEVITDGDISKRIALLK-------LQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 +NG VIT DI +R+AL+ L ++ LI ETLK Q I Sbjct: 59 AVVNGFVITGTDIDQRVALVTNASEVEVSDAERQRLRVQVLRNLIDETLKIQAARAQEIG 118 Query: 97 FDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + V + Q A G + E +L G K+ + + W ++++ + Sbjct: 119 VERAEVEQTYQQLAAQNFGQNPERMDEYLASIGSSPAALKRQIEGEIAWENLIRRNISPF 178 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 E+ ++++ E ++ + +N+ V + ++ E Sbjct: 179 VNVSAEEVTGVLERLEEARGTEEYRLGEIY--MNATEENREAVIQNMQRIMEQLEAGGSF 236 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274 +F+ V G +L + L P + P G I + D Sbjct: 237 VAYARQFSEASTAVQGGDTGFLRLATLPGPMADAARQMQPGQLVGPIAIPGGFTIIYMID 296 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 +R + + LS + ++ + +NA I + Sbjct: 297 RRQVLTADPRDSVLSLKQISIAFDQGT----SEAEANAKIEEF 335 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 3/83 (3%) Query: 237 LLESDLHPQFQNLL-KKSQNNTTNPYVT-QKGVEYIAICDKRDLGGE-IALKAYLSAQNT 293 + L Q QN+L TT P+ + Q+GV + +C + + + Sbjct: 365 IQARQLPEQLQNILLNMQVGQTTPPFGSAQEGVRVLMLCGRDEPEDSGTPTFQTVMTNIE 424 Query: 294 PTKIEKHEAEYVKKLRSNAIIHY 316 +I K Y++ LR++A I Y Sbjct: 425 SERINKRAQRYLRDLRNDAYIEY 447 >gi|325295072|ref|YP_004281586.1| SurA domain [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065520|gb|ADY73527.1| SurA domain [Desulfurobacterium thermolithotrophum DSM 11699] Length = 283 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 105/307 (34%), Gaps = 27/307 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K L +F++++ +P + I +NGE I ++ ++ + Sbjct: 1 MKRLLVFFLVMVLLTLP----SYAKIVDYIVAVVNGEPILYSELLDYAKTNRINNL---- 52 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGD 131 K A LI + E + G+ +N +N+G E+F L K+G+ Sbjct: 53 -KAARDSLIERKILLTEAKSEGLAVSDEELNRALENFIKNSGFKSKEEFEKALKKEGLTL 111 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 K+ L Q + ++ + K ++E+ ++ K VRE V Sbjct: 112 EEVKEKLKEQLLVAKLIGRNVKSKIRVSDIEVEKVCKEKKKKPVREVYYIYV-------- 163 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLL 250 +++ E ++++ + G + + L + Sbjct: 164 -----KDKQKANRIMEILDSGIPFEKVAKEYSEDKATAQNGGYLGKVTKGSLIKPLDIAV 218 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 ++ T T+ G I + + E K + + K +K +Y+ L+S Sbjct: 219 WSTKPKTYKLVETKGGYYIIYV---KKEEIEKCDKNRIREELYVKKFQKALKDYIDSLKS 275 Query: 311 NAIIHYY 317 A + Y Sbjct: 276 KASVKVY 282 >gi|295704136|ref|YP_003597211.1| foldase protein PrsA [Bacillus megaterium DSM 319] gi|294801795|gb|ADF38861.1| foldase protein PrsA [Bacillus megaterium DSM 319] Length = 291 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 36/281 (12%), Positives = 78/281 (27%), Gaps = 26/281 (9%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S++ T+ E IT + + + LI + + +E K I Sbjct: 27 NKSKVVATVGDEKITKDQLYDALLAQGGSS--------VLDSLIEQKVISKEAAKQNIKV 78 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 +N G + L K Sbjct: 79 TDKEINAELENLKSQYGGEDALNQALASS-----GVKLSELKKDLKTNIEAKKMVESTIN 133 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + E+ + + K+ E ++ +K K+ + + Sbjct: 134 IKDSEMKSYFDQNKDSLATEAQVKASHIL---------VADEKTAKEVKAKLDKGEDFAK 184 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK 275 +++++ + G Y + D+ F N N ++P T+ G I + K Sbjct: 185 LAKEYSTDTASKSNGGDLGYFKKGDMVEAFANQAFSMKVNEVSDPVKTEYGYHIIKVTGK 244 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 ++ KA + K + +++KL+ I Sbjct: 245 KEAQKATYENSKAKIKQTLLDQKYQTEYPTWLQKLKKKYDI 285 >gi|311695072|gb|ADP97945.1| PpiC-type peptidyl-prolyl cis-trans isomerase [marine bacterium HP15] Length = 614 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 44/399 (11%), Positives = 101/399 (25%), Gaps = 86/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + I + +++ I + + T+NGE IT+ + + + Sbjct: 1 MLQDIRNNAQGTIAKVIIGLLIVSLSIWGMDAIVGGFSGEPEVATVNGEDITEREFLRVV 60 Query: 61 ALLKLQK------------INGELEKIAVQELIVETLKKQE-----------------IE 91 + ++ ++ + LI E + Q+ + Sbjct: 61 QMESQRRLSRMENPDPSMLDEDQIRTDVLDSLIQEQVLIQDANAQGLELNDADIDALITQ 120 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK---------QYLAIQS 142 D FV RN G+ +F + KQ + + A Q Sbjct: 121 MPQFQVDGQFNRDRFVATVRNMGMGVGEFREAMRKQYVVNQIRAGIVQSGLVADENAEQL 180 Query: 143 IWPDVVKNDFM----------LKYGNLEMEIPANKQKMKNITVREYLI------------ 180 + F + ++ A ++ + + Sbjct: 181 LQIQNQTRSFRVLDIPASSVADAVSVSDADVEAFYEENSGAFQQPERVDAAYITLSLGAL 240 Query: 181 ----------------------RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + ++ + + +E + Sbjct: 241 AESIEVDDAELQAYYEQQAADLASEERRASHILIEEGSDADETMATIQERLAAGESFADL 300 Query: 219 LEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276 +++ G Y F+ L + + P T GV I + D R Sbjct: 301 AREYSIDTVSAEDGGDLGYAGRGIYAEPFEEALFALEEGEVSEPVRTSFGVHLIRLEDVR 360 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++ ++ L + K + AE +L +A Sbjct: 361 ESEVPSLDEMEDQLRRELAREKAREQFAEVRAELADSAY 399 >gi|227114234|ref|ZP_03827890.1| peptidyl-prolyl cis-trans isomerase SurA [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 431 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 102/309 (33%), Gaps = 16/309 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ + ++ + + ++ ++ V+ + D++ + +KL L Sbjct: 7 LILGLALSASTAFAAPQVVDKVAAVVDNSVVLESDVNSLLQSVKLNAQQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 LI++ + Q +K GI +N A +S + S L +G+ N Sbjct: 67 RHQITDRLIMDNIILQMAQKMGIQVTDEQLNQAITNIAAQNRMSLDQLKSQLAYEGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L E+ +++ T + IP ++ Sbjct: 127 TYRNQIRKEMLISEVRNNEVRRRITVLPQEVDTLAKQIATQTGENDELNLSHILIPLSEN 186 Query: 193 QNQGFVQKRIKDA---EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 Q V + A + +++ + G+ + ++ F + Sbjct: 187 PTQQQVDEAENLATSLVKQINEGADFGKLAITYSADSQALKGGQMGWGKLQEIPTLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 L + + P + G + + D R + ++ + + + Sbjct: 247 LTQAQKGQVVGPIRSGVGFHILKVNDIRGGNKSVSVTETHARHILIKPSVVMTDSQAQAK 306 Query: 305 VKKLRSNAI 313 + ++ Sbjct: 307 LAEVAQQIK 315 Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 57/167 (34%), Gaps = 4/167 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + K+++V E R +L +Q K + A++ + Sbjct: 259 IRSGVGFHILKVNDIRGGNKSVSVTETHARHILIKPSVVMTDSQAQ-AKLAEVAQQIKNG 317 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEY 269 ++ + + G + P F++ L K + + P + G Sbjct: 318 STDFASQAKLLSQDPGSANQGGDLGWASPDMYDPAFRDALLKLKKGEISQPVHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + D R + + A K K + ++++ R+ A + Sbjct: 378 IQLLDTRQVDKTDAAQKEQAYRMIFNRKFAEEAQTWMQEQRAAAYVK 424 >gi|328473322|gb|EGF44170.1| peptidyl-prolyl cis-trans isomerase D [Vibrio parahaemolyticus 10329] Length = 619 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 42/406 (10%), Positives = 103/406 (25%), Gaps = 92/406 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY ++ + I G+ Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYLVNGSNNS-AAKVGNTEIPRGEFEMAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + +I + L Q+ E G+ V Sbjct: 60 QNERNRMQAQLGDYFSQMLADPAYVESFRKSVLDRMINDVLLDQQAEALGLRISDAQVRS 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 Q N E + + L + G + F +Y+ + + ++ Sbjct: 120 MILEMPQFQSNGQFDQEIYQASLRRAGFSPDSFAEYMRRELVREQLLTALQSSEFTLPGE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +F K + EI A + + R ++ + Sbjct: 180 VQSQGKLFTQTRDIRTVTIDLAEFAKKVELTDEEIQAYYKANPDNFTRPEQVKVSYVELS 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 L+ Q V + + + + Sbjct: 240 AEALKKQIQVTDEDVKKYYDEHLDKYSSEEQRRVAHILVEGDDEAKAQAILDELNSGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ K+ + + + G I + Sbjct: 300 AAVAQEKSDDFGSAENGGDLGWIERDVMDPAFEEAAFALKNPGDMSGLVKSDFGYHIIKL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +D + A + + K E +L A Y Sbjct: 360 EELKDAVAKPFDEVAAEIKQELVDQKAVDQFYELQNELERVAF-EY 404 >gi|227327727|ref|ZP_03831751.1| peptidyl-prolyl cis-trans isomerase SurA [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 431 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 33/309 (10%), Positives = 101/309 (32%), Gaps = 16/309 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ + ++ + + ++ ++ V+ + D++ + +KL L Sbjct: 7 LILGLALSASTAFAAPQVVDKVAAVVDNSVVLESDVNSLLQSVKLNAQQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 LI++ + Q +K GI ++ A +S + S L +G+ + Sbjct: 67 RHQITDRLIMDNIILQMAQKMGIQVTDEQLDQAITNIAAQNRMSLDQLKSQLAYEGLNYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L E+ +++ T + IP + Sbjct: 127 TYRNQIRKEMLISEVRNNEVRRRITVLPQEVDTLAKQIATQTGENDELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDA---EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 Q V + A + +++ + G+ + ++ F + Sbjct: 187 PTQQQVDEAENLATSLVKQINEGADFGKLAITYSADSQALKGGQMGWGKLQEIPTLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 L + + P + G + + D R + ++ + + + Sbjct: 247 LTQAQKGQVVGPIRSGVGFHILKVNDIRGGNKSVSVTETHARHILIKPSVVMTDSQAQAK 306 Query: 305 VKKLRSNAI 313 + ++ Sbjct: 307 LAEVAQQIK 315 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 57/167 (34%), Gaps = 4/167 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + K+++V E R +L +Q K + A++ + Sbjct: 259 IRSGVGFHILKVNDIRGGNKSVSVTETHARHILIKPSVVMTDSQAQ-AKLAEVAQQIKNG 317 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEY 269 ++ + + G + P F++ L K + + P + G Sbjct: 318 STDFASQAKLLSQDPGSANQGGDLGWASPDMYDPAFRDALLKLKKGEISQPVHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + D R + + A K K + ++++ R+ A + Sbjct: 378 IQLLDTRQVDKTDAAQKEQAYRMIFNRKFAEEAQTWMQEQRAAAYVK 424 >gi|225166093|ref|ZP_03727827.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Opitutaceae bacterium TAV2] gi|224799664|gb|EEG18159.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Opitutaceae bacterium TAV2] Length = 351 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 98/296 (33%), Gaps = 17/296 (5%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKIN------------GELEKIAVQELIVETLK 86 ++ I + VIT DI + +A + Q +++ V+ LI TL Sbjct: 56 ANGIAAIVEDRVITVDDIRRELAPILPQIRRDSRNAKEFQDKVQAVQEDIVRSLIDRTLI 115 Query: 87 KQEIEKS-GITFDSNTVNYFF-VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 ++ K ++ ++ Q A+ F S+L +G+ +++ + ++ Sbjct: 116 VKDFYKDGRRHIPASYIDNAISDQMAQKFDNDRAKFLSYLRARGLTLRDYRKEVEEDLVY 175 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 + + + A ++ ++ +E I + + Q + R + Sbjct: 176 GYMRSQQRKSQSIVSPARVEAYYKQNESKFYQEEAIHLRMIQLNRENGQADAHLIVRANE 235 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVT 263 + K + + + G + + DL P F + T P + Sbjct: 236 IIDKFNNGEKFEDLAKAYTQDSRKARGGDWGWQRKVDLKPDFSTPLFSLKKGGVTAPILQ 295 Query: 264 QKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + D R + ++ + + + ++++KLR A I Y Sbjct: 296 GDACFILYAEDYRAAGVPAIDEVRDQIERTLIAQMARESQEKWLEKLRRGAYIKLY 351 >gi|189423768|ref|YP_001950945.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter lovleyi SZ] gi|189420027|gb|ACD94425.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter lovleyi SZ] Length = 305 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 39/319 (12%), Positives = 92/319 (28%), Gaps = 47/319 (14%) Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA-- 61 + T LS + ++ T L+ S + + +++ T+NG IT D + + Sbjct: 2 NIRTLLSVTVTVIATA-GLVACQGGGSSSSSTSSKDAKVIATVNGAKITSEDFDREVKAL 60 Query: 62 --LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 ++ + +K + L++ L Q+ K G+ Sbjct: 61 PEYIRAMADTPQGKKEMIDTLVMRELILQQAAKDGVDKGKEIE----------------- 103 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 L + I +K + + E+ ++ + Sbjct: 104 -------------EKLAELKKRIIVDTYLKKKVEAESKISDDELKKFYEQNLDKFKAGEQ 150 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 IR ++ + E + + ++ G + + Sbjct: 151 IRASHIL---------VKSEQEAQSILEQLKKGANFEELAKTKSADSSAAKGGDLGWFGK 201 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTK 296 ++ P F+ + + + G I + KR G +K + P K Sbjct: 202 GNMVPAFEKAAFGLKEGQLSGIVKSDFGYHIIKLTGKRAAGTRPLDEVKEQIKGAIMPQK 261 Query: 297 IEKHEAEYVKKLRSNAIIH 315 ++ + + L+ A I Sbjct: 262 QQQVFMKLKEDLKKGAKIE 280 >gi|294498814|ref|YP_003562514.1| foldase protein PrsA [Bacillus megaterium QM B1551] gi|294348751|gb|ADE69080.1| foldase protein PrsA [Bacillus megaterium QM B1551] Length = 291 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 36/281 (12%), Positives = 78/281 (27%), Gaps = 26/281 (9%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S++ T+ E IT + + + LI + + +E K I Sbjct: 27 NKSKVVATVGDEKITKDQLYDALLAQGGSS--------VLDSLIEQKVISKEAAKQNIKV 78 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 +N G + L K Sbjct: 79 TDKEINAELENLKSQYGGEDALNQALASS-----GVKLSELKKDLKTNIEAKKMVESTIN 133 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + E+ + + K+ E ++ +K K+ + + Sbjct: 134 IKDSEMKSYFNQNKDSLATEAQVKASHIL---------VADEKTAKEVKAKLDKGEDFAK 184 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK 275 +++++ + G Y + D+ F N N ++P T+ G I + K Sbjct: 185 LAKEYSTDTASKSNGGDLGYFKKGDMVEAFANKAFSMKVNEVSDPVKTEYGYHIIKVTGK 244 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 ++ KA + K + +++KL+ I Sbjct: 245 KEAQKATYENSKAKIKQTLLDQKYQTEYPTWLQKLKKKYDI 285 >gi|310825131|ref|YP_003957489.1| foldase protein PrsA [Stigmatella aurantiaca DW4/3-1] gi|309398203|gb|ADO75662.1| foldase protein PrsA [Stigmatella aurantiaca DW4/3-1] Length = 330 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 90/291 (30%), Gaps = 22/291 (7%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRI--------ALLKLQKINGELEKIAVQELIVETL 85 + + +NGEV+ + + + + + ++ + LI L Sbjct: 26 PQEEPDANVVAMVNGEVLGRAEFEQELWRELSSAEGPERTPEEVEPFKRALLDTLIKRML 85 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 Q+ ++ +T + V+ ++ + AE+FS L + + + A + I Sbjct: 86 LLQQAKQYNLTVTPDEVDRRMLRL--SGDYPAENFSEVLAQGQMSLAELRAREANRLIIE 143 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + N + E E+ A + + + + Q + Sbjct: 144 KLFTNHVYARVAVTEEELRAAYTAHEAEFQEPEQVHAAQLVVKGLDEARRVQAQLK---- 199 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQ 264 K + +++ G + + P F + + ++ T+ Sbjct: 200 -----AGKKFADLARRYSLSADAKVGGDLGFFPRGQMPPVFDEVVFNLRPGQVSDVVSTE 254 Query: 265 KGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 G + + + + ++A + A+ K E+ + K L A Sbjct: 255 YGYHLFRVLEFKPARKRDFVEVRAKVEAREVKRKQEEAHEAFEKALLDKAK 305 >gi|126462315|ref|YP_001043429.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides ATCC 17029] gi|126103979|gb|ABN76657.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides ATCC 17029] Length = 435 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 108/305 (35%), Gaps = 7/305 (2%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT---TINGEVITDGDISKRIALLKLQKIN 69 +K ++ + ++ + A++ + +N VIT+ + +R+ L + Sbjct: 31 MKTFVSHCLALVVAAGLTFTSAPGALAQNLFAPRLVVNDRVITNYEFEQRVRFLTILGAT 90 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 G++EK A+ LI + ++ E++G+ + + A LSAE F++ L K G+ Sbjct: 91 GDVEKQAMDALIEDKIRFDAAEQAGLKATEEQIKEGMEEFAGRANLSAEQFAAELGKAGV 150 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 F+ ++ IW ++++ F E I + + L+ ++ P Sbjct: 151 AVETFRDFVHAGLIWRELMRAKFGAVARPTETAIDRAITRQTSRASIRLLLSEIIIPAPP 210 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + I++ +++ G+ ++ +L P + Sbjct: 211 GQEAEAQALAAEIRNNVRGEGAF---AEAARTYSASSSAERGGRIDWVPLQNLPPTLGPM 267 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 L S ++P V + + + L + A + ++ Sbjct: 268 LLTLSPGQVSDPVKIPNAVALFQLRGRDESSAPPPEGIELEYAELFLPNDAEFAAELGRI 327 Query: 309 RSNAI 313 S A Sbjct: 328 TSRAD 332 Score = 40.8 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 20/46 (43%) Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + +C +R + E + L+ I Y+ LR+NAII Sbjct: 387 VLMLCARRPVSAEPIDRGRLAQALANQSISASADAYMADLRANAII 432 >gi|157960692|ref|YP_001500726.1| SurA domain-containing protein [Shewanella pealeana ATCC 700345] gi|157845692|gb|ABV86191.1| SurA domain [Shewanella pealeana ATCC 700345] Length = 434 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 35/310 (11%), Positives = 101/310 (32%), Gaps = 15/310 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 +K ++ + + R+ IN +I + +++ + +K N Sbjct: 1 MKRCNQLIFALLTLAMSQTIQAAPEPLDRVTVQINEGIILESEVAGMVKTIKANAANAGQ 60 Query: 71 ------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L ++ LI+ L+ Q ++ G+ ++ A+ ++ + + Sbjct: 61 KLPSDTALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQTIENIAKEQKITVAQMKAQI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + +G +++ L + ++ + + EI + + ++E + Sbjct: 121 ESEGTTFAQYREQLREEITLGEIQRIQVQRRIQVSPQEINNLVKLINEQGLKEVEFQIGH 180 Query: 185 FSIPDNKLQNQGFVQ---KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I N ++ KR + + +S + G Y+ ++ Sbjct: 181 ILIDVPSDANSQQLEAASKRSATVMKRLKDGDDFRSIAIAASSGPKALEGGIWDYMNINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTKI 297 + F + + + P + G I + D R L + + ++ + +P Sbjct: 241 MPTLFAEVVGDAKTGDIIGPIKSASGFHIIKVMDARGLQTKEVQEVKSRHILLKPSPILS 300 Query: 298 EKHEAEYVKK 307 E+ + + Sbjct: 301 EERAKSMMDR 310 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 36/294 (12%), Positives = 84/294 (28%), Gaps = 27/294 (9%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 E IT G+I + ++Q E+ + LI E K+ + G + Q Sbjct: 136 EEITLGEIQRIQVQRRIQVSPQEINNLVK--LINEQGLKEVEFQIGHILIDVPSDANSQQ 193 Query: 109 HARNTGLSAEDFSSFLDKQGIGD----------------NHFKQYLAIQSIWPDVV---- 148 + SA D + + +++ +VV Sbjct: 194 LEAASKRSATVMKRLKDGDDFRSIAIAASSGPKALEGGIWDYMNINEMPTLFAEVVGDAK 253 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 D + + + + +E + K + D + Sbjct: 254 TGDIIGPIKSASGFHIIKVMDARGLQTKEVQEVKSRHILLKPSPILSEERAKSMMDRFLA 313 Query: 209 RLRL--PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQ 264 +++ K + +++ G+ + + P F Q L + P+ + Sbjct: 314 QVKSGEAKFEDLARQYSEDPGSAAKGGELGWADPNIYVPAFSQELNSLEVGAYSEPFRST 373 Query: 265 KGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + + +KR + K + ++ ++R+ A I + Sbjct: 374 HGWHIVQLEEKRTTDATDKFNTNRAHQLIYRRKFNEELQNWLDEMRAEAFIDIF 427 >gi|33603075|ref|NP_890635.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella bronchiseptica RB50] gi|81714068|sp|Q7WG19|SURA_BORBR RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|33568706|emb|CAE34464.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella bronchiseptica RB50] Length = 519 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 35/352 (9%), Positives = 92/352 (26%), Gaps = 69/352 (19%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQEL 80 P S I +N +VIT ++ + L L+K +Q L Sbjct: 44 PATPAPSEQFVDGIAAIVNKDVITLREVREASKLASADLQKRGIQVPDERTLQKQVLQRL 103 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I+E L++QE ++ GI D V+ A ++ + ++K G+ +++ L Sbjct: 104 IMERLERQEADRMGIRVDEAQVDQAINMIASRNKITPAAMRAEIEKSGVTWEQYRKSLRD 163 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE----------------------- 177 + + + E+ A + + Sbjct: 164 DIRMDRLRQRAVDANIIISDAEVDAFLKDQERNPAAAQATRAPAPQQPQPQPRQPAQSGP 223 Query: 178 ---YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 L + ++ + ++K+ + + + + + G Sbjct: 224 AMLVLAQILVRVPEGSSPDQVAALRKKAEGLLARAKKGDDFASLAAANSDGPEALQGGMM 283 Query: 235 QYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK------------------ 275 F + S + + G + + D+ Sbjct: 284 GARPLDGWPDLFVKAAGSLSAGQVSGLVQSGNGFHILKVVDRAGGGQPAQAARPAPAPAP 343 Query: 276 ----------------RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + ++ + + + + ++++R Sbjct: 344 QQPSSFQEGPSVAAPQGPVRVTQTHARHILIKTSTVMTDDQARQRLEQIRER 395 Score = 96.3 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 46/137 (33%), Gaps = 2/137 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + + + Q+ + E + K + +++ G ++ Sbjct: 368 HARHILIKTSTVMTDDQARQRLEQIRERLQGGAVKFEDMARQYSQDSTAPQGGDLGWVNP 427 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKI 297 D P F+ + N + P ++ G I + ++R+ + + + Sbjct: 428 GDTVPPFEAAMNALQPNEISPPVLSPFGWHLIQVLERREHDVSDEVQRMRARQLLFERRA 487 Query: 298 EKHEAEYVKKLRSNAII 314 +++++LRS A I Sbjct: 488 VPAFEDWLEQLRSQAFI 504 >gi|33598180|ref|NP_885823.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella parapertussis 12822] gi|81713639|sp|Q7W4J5|SURA_BORPA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|33566738|emb|CAE38950.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella parapertussis] Length = 519 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 35/352 (9%), Positives = 93/352 (26%), Gaps = 69/352 (19%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQEL 80 P S I +N +VIT ++ + L L+K +Q L Sbjct: 44 PATPAPSEQFVDGIAAIVNKDVITLREVREASKLASADLQKRGIQVPDERTLQKQVLQRL 103 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I+E L++QE+++ GI D V+ A ++ + ++K G+ +++ L Sbjct: 104 IMERLERQEVDRMGIRVDEAQVDQAINMIASRNKITPAAMRAEIEKSGVTWEQYRKSLRD 163 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE----------------------- 177 + + + E+ A + + Sbjct: 164 DIRMDRLRQRAVDANIIISDAEVDAFLKDQERNPAAAQATRAPAPQQPQPQPRQPAQSGP 223 Query: 178 ---YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 L + ++ + ++K+ + + + + + G Sbjct: 224 AMLVLAQILVRVPEGSSPDQVAALRKKAEGLLARAKKGDDFASLAAANSDGPEALQGGMM 283 Query: 235 QYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK------------------ 275 F + S + + G + + D+ Sbjct: 284 GARPLDGWPDLFVKAAGSLSAGQVSGLVQSGNGFHILKVVDRAGGGQPAQAARPAPAPAP 343 Query: 276 ----------------RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + ++ + + + + ++++R Sbjct: 344 QQPSSFQEGPSVAAPQGPVRVTQTHARHILIKTSTVMTDDQARQRLEQIRER 395 Score = 96.3 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 46/137 (33%), Gaps = 2/137 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + + + Q+ + E + K + +++ G ++ Sbjct: 368 HARHILIKTSTVMTDDQARQRLEQIRERLQGGAVKFEDMARQYSQDSTAPQGGDLGWVNP 427 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKI 297 D P F+ + N + P ++ G I + ++R+ + + + Sbjct: 428 GDTVPPFEAAMNALQPNEISPPVLSPFGWHLIQVLERREHDVSDEVQRMRARQLLFERRA 487 Query: 298 EKHEAEYVKKLRSNAII 314 +++++LRS A I Sbjct: 488 VPAFEDWLEQLRSQAFI 504 >gi|315122192|ref|YP_004062681.1| peptidyl-prolyl cis-trans isomerase protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495594|gb|ADR52193.1| peptidyl-prolyl cis-trans isomerase protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 315 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 170/303 (56%), Positives = 227/303 (74%), Gaps = 1/303 (0%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + I Y+S A+SS+I T+NGE ITDGDISKRIA LKL+KING+L+KI Sbjct: 12 FSKLLAVCVVLIACFYPYESSAISSQISITVNGEAITDGDISKRIAFLKLRKINGDLKKI 71 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A QELI E LKKQE E GI + N++NYFF Q+ARNTG+SAE+FS L+ GIG+NHFK Sbjct: 72 AKQELIAEALKKQESEGFGIILNPNSMNYFFAQYARNTGISAEEFSDMLEHLGIGENHFK 131 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQN 194 QYLAIQ W ++V+N F++KY L ME+P + + REYL++ ++FS+P NK +N Sbjct: 132 QYLAIQLAWDEIVRNTFIMKYRGLGMEMPPSIKGRGKNLTVREYLVKKIIFSVPYNKHKN 191 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 + F+QKRI +AE+SR P +CN++E+FAS +HDVS+ QY LESDL PQ + LLKK++ Sbjct: 192 EDFIQKRIDEAEKSRFHFPTNCNRVEEFASAMHDVSVSNPQYFLESDLQPQLKILLKKTK 251 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 NNTTN YVT+KGVEYIAIC+ RD+GGE+ALKAY + Q P K++K++ EY+K LR+NAII Sbjct: 252 NNTTNTYVTEKGVEYIAICNIRDIGGELALKAYFNTQEIPKKMKKYDEEYMKTLRANAII 311 Query: 315 HYY 317 +Y Sbjct: 312 QFY 314 >gi|28897695|ref|NP_797300.1| peptidyl-prolyl cis-trans isomerse D [Vibrio parahaemolyticus RIMD 2210633] gi|260878350|ref|ZP_05890705.1| peptidyl-prolyl cis-trans isomerase D [Vibrio parahaemolyticus AN-5034] gi|260898294|ref|ZP_05906790.1| peptidyl-prolyl cis-trans isomerase D [Vibrio parahaemolyticus Peru-466] gi|260901515|ref|ZP_05909910.1| SurA N-terminal domain protein [Vibrio parahaemolyticus AQ4037] gi|28805908|dbj|BAC59184.1| peptidyl-prolyl cis-trans isomerse D [Vibrio parahaemolyticus RIMD 2210633] gi|308088424|gb|EFO38119.1| peptidyl-prolyl cis-trans isomerase D [Vibrio parahaemolyticus Peru-466] gi|308092760|gb|EFO42455.1| peptidyl-prolyl cis-trans isomerase D [Vibrio parahaemolyticus AN-5034] gi|308110873|gb|EFO48413.1| SurA N-terminal domain protein [Vibrio parahaemolyticus AQ4037] Length = 619 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 42/406 (10%), Positives = 103/406 (25%), Gaps = 92/406 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY ++ + I G+ Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYLVNGSNNS-AAKVGNTEIPRGEFEMAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + +I + L Q+ E G+ V Sbjct: 60 QNERNRMQAQLGDYFSQMLADPAYVESFRKSVLDRMINDVLLDQQAEALGLRISDAQVRS 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 Q N E + + L + G + F +Y+ + + ++ Sbjct: 120 MILEMPQFQSNGQFDQEIYQASLRRAGFSPDSFAEYMRRELVREQLLTALQSSEFTLPGE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +F K + EI A + + R ++ + Sbjct: 180 VQSQGKLFTQTRDIRTVTIDLAEFAKKVELTDEEIQAYYKANPDNFTRPEQVKVSYVELS 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 L+ Q V + + + + Sbjct: 240 AEALKKQIQVTDEDVKKYYDEHLDKYSSEEQRRVAHILVEGDDEAKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ K+ + + + G I + Sbjct: 300 AAVAQEKSDDFGSAENGGDLGWIERDVMDPAFEEAAFALKNPGDMSGLVKSDFGYHIIKL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +D + A + + K E +L A Y Sbjct: 360 EELKDAVAKPFDEVAAEIKQELVDQKAVDQFYELQNELERVAF-EY 404 >gi|77463460|ref|YP_352964.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides 2.4.1] gi|77387878|gb|ABA79063.1| Probable PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides 2.4.1] Length = 435 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 107/305 (35%), Gaps = 7/305 (2%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT---TINGEVITDGDISKRIALLKLQKIN 69 +K ++ + ++ + A++ + +N VIT+ + +R+ L + Sbjct: 31 MKTFVSHCLALVVAAGLTFTSAPGALAQNLFAPRLVVNDRVITNYEFEQRVRFLTILGAT 90 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 G++EK A+ LI + ++ E++G+ + + A LSAE F++ L K G+ Sbjct: 91 GDVEKQAMDALIEDKIRFDAAEQAGLKATEEQIKEGMEEFAGRANLSAEQFAAELGKAGV 150 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 F+ ++ IW ++++ F E I + + L+ ++ P Sbjct: 151 AVETFRDFVHAGLIWRELMRAKFGAVARPTETAIDRAITRQTSRASIRLLLSEIIIPAPP 210 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + I+ +++ G+ ++ +L P + Sbjct: 211 GQEAEAQALAAEIRRNVRGEGAF---AEAARTYSASSSAERGGRIDWVPLQNLPPTLGPM 267 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 L S ++P V + + + L + A + ++ Sbjct: 268 LLTLSPGQVSDPVKIPNAVALFQLRGRDESSAPPPEGIELEYAELFLPNDAEFAAELGRI 327 Query: 309 RSNAI 313 S A Sbjct: 328 TSRAD 332 Score = 40.8 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 20/46 (43%) Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + +C +R + E + L+ I Y+ LR+NAII Sbjct: 387 VLMLCARRPVSAEPIDRGRLAQALANQSISASADAYMADLRANAII 432 >gi|253575648|ref|ZP_04852984.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844986|gb|EES72998.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. oral taxon 786 str. D14] Length = 398 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 93/276 (33%), Gaps = 26/276 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 T+NG IT + + +A + A+ LI + L QE K+ IT V Sbjct: 134 VATVNGVEITKDRLYEELA--------ANGGEQALTNLINQELVNQEAAKNNITITDADV 185 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + + G S E + L++ G+ + + + ++ +++ + + + Sbjct: 186 DAEIETYKTQFG-SEEALNQALEQYGMTMDDLLKQVEMELKLTKLLE----PQINVTDEQ 240 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + K+ +RT + ++ KD + + Sbjct: 241 VKETFETYKDSFNTPEQVRTSVIL---------VATEEEAKDIVKQLKEGADFAELAKSK 291 Query: 223 A-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL-- 278 + G + ++ + K ++ + P T +G + I + DK++ Sbjct: 292 SLDTATKDQGGDTDFFARGEMEEAVEEAAFKLAKGEISEPVKTSEGYQVIKVTDKKEAHT 351 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ +++ +RS A I Sbjct: 352 ATLEEKKDEIRKSLISQQVSSMSGAWLEDVRSKAKI 387 >gi|297183681|gb|ADI19806.1| parvulin-like peptidyl-prolyl isomerase [uncultured alpha proteobacterium EB000_37G09] Length = 288 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 86/313 (27%), Gaps = 54/313 (17%) Query: 13 IKLLTTYFVLIIF-----CIVPIVSYKSWAMSSRI-RTTINGEVITDGDISKRIALLKLQ 66 + + ++ + S + ++I +NGE I ++ + L + Sbjct: 1 MSFIRSFCCAALLVSSPIIFATTSSAQENKPENKITVADVNGEAIYLEEVMRLAEKLPTE 60 Query: 67 KINGELEKI---AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 LE V ++I L +SG++ + Sbjct: 61 YRQRPLESYFGGLVDDVIDSRLAAVAGAESGLSEN------------------------- 95 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 G + + A++ + + + N + E R + Sbjct: 96 -----PGVSRLMEVAAMRVLAEAWIAEQVNKAITEDALTATYKLYIADNGSREEVKARHI 150 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 L + + E + ++ + G Y + Sbjct: 151 LVPE-----------EATARAIIEKLTGGADFAEIAKTDSTGPSGPNGGDLGYFARGAMV 199 Query: 244 PQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 P F+ + + T P TQ G I + DKR + Q + + Sbjct: 200 PTFEAAAFELEPGSFTPEPVQTQFGWHIIKVEDKRVATP--PSFEEMVPQLRQNLLNQTL 257 Query: 302 AEYVKKLRSNAII 314 ++KLR++A I Sbjct: 258 GRILEKLRASAQI 270 >gi|332558337|ref|ZP_08412659.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides WS8N] gi|332276049|gb|EGJ21364.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides WS8N] Length = 405 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 107/305 (35%), Gaps = 7/305 (2%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT---TINGEVITDGDISKRIALLKLQKIN 69 +K ++ + ++ + A++ + +N VIT+ + +R+ L + Sbjct: 1 MKTFVSHCLALVVAAGLTFTSAPGALAQNLFAPRLVVNDRVITNYEFEQRVRFLTILGAT 60 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 G++EK A+ LI + ++ E++G+ + + A LSAE F++ L K G+ Sbjct: 61 GDVEKQAMDALIEDKIRFDAAEQAGLKATEEQIKEGMEEFAGRANLSAEQFAAELGKAGV 120 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 F+ ++ IW ++++ F E I + + L+ ++ P Sbjct: 121 AVETFRDFVHAGLIWRELMRAKFGAVARPTETAIDRAITRQTSRASIRLLLSEIIIPAPP 180 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + I+ +++ G+ ++ +L P + Sbjct: 181 GQEAEAQALAAEIRRNVRGEGAF---AEAARTYSASSSAERGGRIDWVPLQNLPPTLGPM 237 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 L S ++P V + + + L + A + ++ Sbjct: 238 LLTLSPGQVSDPVKIPNAVALFQLRGRDESSAPPPEGIELEYAELFLPNDAEFAAELGRI 297 Query: 309 RSNAI 313 S A Sbjct: 298 TSRAD 302 Score = 40.8 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 20/46 (43%) Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + +C +R + E + L+ I Y+ LR+NAII Sbjct: 357 VLMLCARRPVSAEPIDRGRLAQALANQSISASADAYMADLRANAII 402 >gi|295098567|emb|CBK87657.1| Parvulin-like peptidyl-prolyl isomerase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 428 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 104/311 (33%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGEL 72 +L+ +V S+ + + ++ +N V+ + D+ + +KL + L Sbjct: 7 LLLGVAMVANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMKSVKLNSGEAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+T ++ A+ ++ + S L GI Sbjct: 67 RHQILERLIMDQIVLQMGQKMGVTISDEQLDQAIANIAKQNNITPDQMRSRLAYDGISYA 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPD 189 ++ + + + +V N+ + L E+ + + L ++ + Sbjct: 127 TYRNQIRKEMLISEVRNNEVRRRVTILPQEVDALAKQVGNQNDASTELNLSHILIPLPEN 186 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + + E +++ + G+ + +L F Sbjct: 187 PTSDQAAEAESQARAIVEQARNGDDFGKLAITYSADQQALKGGQMGWGRIQELPSLFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P + Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQNISVTEVHARHILLKPSPIMTDDQARAK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 90/288 (31%), Gaps = 25/288 (8%) Query: 47 NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 N EV I ++ + Q L + E S ++ + Sbjct: 143 NNEVRRRVTILPQEVDALAKQVGNQNDASTELN-----LSHILIPLPENPTSDQAAEAES 197 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 V+ ARN + ++ Q + IQ + + Sbjct: 198 QARAIVEQARNGDDFGKLAITYSADQQALKGGQMGWGRIQELPSLFAQALSTAKKGDIVG 257 Query: 152 -FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 G +++ + + +NI+V E R +L +Q K + A + + Sbjct: 258 PIRSGVGFHILKVNDLRGQSQNISVTEVHARHILLKPSPIMTDDQA-RAKLEQIAADIKS 316 Query: 211 RLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVE 268 ++F+ G + P F++ +K ++ + P + G Sbjct: 317 GKTTFDKAAKEFSQDPGSANQGGDLGWAAADIYDPAFRDALMKLNKGQMSPPVHSSFGWH 376 Query: 269 YIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + D R++ + A K K + A ++++ R++A + Sbjct: 377 LIQLMDTRNVDKTDAAQKDRAYRMLFNRKFSEEAATWMQEQRASAYVK 424 >gi|317050626|ref|YP_004111742.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfurispirillum indicum S5] gi|316945710|gb|ADU65186.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfurispirillum indicum S5] Length = 319 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 40/318 (12%), Positives = 103/318 (32%), Gaps = 19/318 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + +++ + + + I +NG IT ++ + + G Sbjct: 1 MKKIGFSLFIVLCGAALSAALSAATLVDGIAAVVNGVPITIQEVRQANKEHIERATRGLA 60 Query: 73 EKIAVQ-----------ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 ++ A + + + + L + ++ I + V Q A N +S Sbjct: 61 DEQAREATMQMLLEGTHQKVEQMLLEDYGRRNRIFISAQQVEEAINQVAANNNVSRSALE 120 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 S L +GI +++ + +Q + + + E+E+ + + R Sbjct: 121 SMLADEGISMESYRRDIRVQLLVMQ-IGQKLSQEISVSELEVVSA--FREGRFQRIPYAD 177 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I + + ++ + E + +++ + G + + Sbjct: 178 VGHVLIALDGKSDDQAIRIAERLHERIISGDIEFEEAARQYSEGPNAAEGGLMKDVRRGR 237 Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD---KRDLGGEIALKAYLSAQNTPTKIE 298 L + + + T + G + + D R++ E + A K E Sbjct: 238 LLRELDQAIFSMEKGQTTLVRSSVGYHILHLYDLGFNREMSDEDFSRT--RAALLREKQE 295 Query: 299 KHEAEYVKKLRSNAIIHY 316 + + +LR +A+I Y Sbjct: 296 RRLQGLMDELRDSAVIQY 313 >gi|50085462|ref|YP_046972.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. ADP1] gi|49531438|emb|CAG69150.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. ADP1] Length = 451 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 110/314 (35%), Gaps = 16/314 (5%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 K L +F +V S +S+A + + ++ VI D+ + +A + Q + Sbjct: 9 KYLKQFFKTTALALVVSSSMQSFAAPTDEVVAIVDNSVILKSDLEQGVAEAQHQLEAQKK 68 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSS 122 L+ + +LI+ + +++++ GI D NT+N ++ A +G+ + Sbjct: 69 TVPPLNYLQLQVLDQLILRQAQLEQVKRYGIKPDENTLNDAVLKVASQSGIKSLSAFQQK 128 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + + + + M + + ++ + + + + Sbjct: 129 LDAIAPGTYASLRNRIGEDLAINRLRQQQVMSRIKISDQDVANFLKSPQGQAMLGSQVHV 188 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + I + +Q + +++ +KF++K V Y ++L Sbjct: 189 IHARISAQSDVDPQQLQSVAQQVKQALNESNDITAISKKFSTKDIKVEGADMGYRDLAEL 248 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL----KAYLSAQNTPTKI 297 + + TT+ + G+ + + ++++ + + ++ Q + Sbjct: 249 PSELAARVSPLQAGQTTDLINVRDGIHVLKLIERKNSEQKAIVTQYQTRHILIQPSEVMS 308 Query: 298 EKHEAEYVKKLRSN 311 + + + + + Sbjct: 309 AEMAKQTIDSIYNR 322 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 14/150 (9%), Positives = 48/150 (32%), Gaps = 3/150 (2%) Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HD 228 +T I +++ + ++ I +++ Sbjct: 284 NSEQKAIVTQYQTRHILIQPSEVMSAEMAKQTIDSIYNRLKAGEDFTTLAATYSADTGSA 343 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGE-IALKA 286 G ++ + P+F++ +K + + P+ TQ G + + R+ + Sbjct: 344 RDGGSLGWVTPGSMVPEFESKMKNTPVGQISEPFQTQFGWHILQVTATREKDMTHEYQER 403 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + +++++R++A + Sbjct: 404 MARQVLGERQFDSELDSWLREVRAHAFVQI 433 >gi|330881719|gb|EGH15868.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. glycinea str. race 4] Length = 256 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 77/240 (32%), Gaps = 11/240 (4%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ ++ + + + ++ +VI + +R+ ++ L Sbjct: 14 LMLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEAL 73 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+E L+ Q E+SGI + +N A+ +S E F + L G+ N Sbjct: 74 QPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYN 133 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I V + + + E+ + I Sbjct: 134 DAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEKFHLANILIATPDS 193 Query: 193 QNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + +Q + + +S + + G + + L P F + Sbjct: 194 ASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMGWRKAAQLPPPFGEM 253 >gi|302383690|ref|YP_003819513.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brevundimonas subvibrioides ATCC 15264] gi|302194318|gb|ADL01890.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brevundimonas subvibrioides ATCC 15264] Length = 450 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 98/260 (37%), Gaps = 10/260 (3%) Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-------ALLKLQKINGELEKIAVQ 78 P+ + M+ I T+N +VIT D+ +R+ + ++ +++ A+Q Sbjct: 48 VTAPLPPQPEFKMADGIVATVNDQVITGFDLRQRMLTTIAMSQVQPTEENIPAIQQQALQ 107 Query: 79 ELIVETLKKQEIEKSGI-TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 LI E L+ EI K V+ + A G + + + FL GI + ++ Sbjct: 108 GLIEERLQAAEIAKFETLKITDAEVDEEIARMAEEAGTTPQAYVEFLTSGGIRAENLREQ 167 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 L + W ++V F + ++ +++ + + ++ Q Sbjct: 168 LRTEIGWRELVGGRFNSRSRVSRAQVQQALRQVTETASKPQYLVGEIYLEAARVGGQQQA 227 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256 + + ++ + +F++ G A +L++ + P+ Q L+ Sbjct: 228 MNGAEQLVQQMV-QGAPFQAVARQFSAAPSAARGGDAGWLVQGTVQPELQAALEALEVGQ 286 Query: 257 TTNPYVTQKGVEYIAICDKR 276 + P GV I + DKR Sbjct: 287 LSRPIPVSGGVYIIYMRDKR 306 Score = 73.2 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 30/268 (11%), Positives = 80/268 (29%), Gaps = 10/268 (3%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE--KSGITFDSNTVNYFFVQ 108 ++ + + + + + L+ E + + + + VQ Sbjct: 188 VSRAQVQQALRQVTETASKPQY-------LVGEIYLEAARVGGQQQAMNGAEQLVQQMVQ 240 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 A ++ + ++ +G Q + + + + + Sbjct: 241 GAPFQAVARQFSAAPSAARGGDAGWLVQGTVQPELQAALEALEVGQLSRPIPVSGGVYII 300 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 M++ L + LR C+ + + S Sbjct: 301 YMRDKRSGAATNLVSLKQAMIELPETAPPADVAAATTRLQTLRGSLTCDNILQRTSSEAG 360 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 + ++L PQFQ + + + ++ T GV +A+C +R G ++ Sbjct: 361 LLGSDLGEADVANLAPQFQQVARSAEIGSVSDVVRTPLGVHLVAVCGRRAGGADVPTARE 420 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + + Y++ LR++A+I Sbjct: 421 IEGRLQNQNLAMLARRYLRDLRADALIE 448 >gi|206581089|ref|YP_002240483.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Klebsiella pneumoniae 342] gi|288937183|ref|YP_003441242.1| peptidylprolyl isomerase [Klebsiella variicola At-22] gi|290512604|ref|ZP_06551970.1| peptidyl-prolyl cis-trans isomerase SurA [Klebsiella sp. 1_1_55] gi|206570147|gb|ACI11923.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Klebsiella pneumoniae 342] gi|288891892|gb|ADC60210.1| Peptidylprolyl isomerase [Klebsiella variicola At-22] gi|289774945|gb|EFD82947.1| peptidyl-prolyl cis-trans isomerase SurA [Klebsiella sp. 1_1_55] gi|294488615|gb|ADE88150.1| peptidyl-prolyl cis-trans isomerase [Pantoea agglomerans] Length = 428 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 105/311 (33%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ + ++ A+ ++ + S L +GI N Sbjct: 67 RHQILERLIMDQIVLQLGQKMGVKVSDDQLDQAIANIAKQNNMTMDQMRSRLAYEGINYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPD 189 ++ + + + +V N+ + L E+ + + L ++ + Sbjct: 127 TYRSQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLAEN 186 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 Q++ E +++ + G+ + +L F Sbjct: 187 PTADEVAAAQEQANAIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P + Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 89/287 (31%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q + + L + E + + Sbjct: 143 NNEVRRRITV--LPQEVEALAKQIGDQNDASTELN-LSHILIPLAENPTADEVAAAQEQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V+ ARN + ++ Q + IQ + + Sbjct: 200 NAIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + +NI+V E R +L Q K + A + + Sbjct: 260 RSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQ-AKLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 + F+ G + P F++ ++ ++ T+ P + G I Sbjct: 319 TTFAKAAKAFSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLI 378 Query: 271 AICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R + + A K K + A ++++ R++A + Sbjct: 379 ELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKI 425 >gi|33594222|ref|NP_881866.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella pertussis Tohama I] gi|81713229|sp|Q7VU12|SURA_BORPE RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|33564297|emb|CAE43595.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella pertussis Tohama I] gi|332383636|gb|AEE68483.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella pertussis CS] Length = 519 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 35/352 (9%), Positives = 92/352 (26%), Gaps = 69/352 (19%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQEL 80 P S I +N +VIT ++ + L L+K +Q L Sbjct: 44 PATPAPSEQFVDGIAAIVNKDVITLREVREASKLASADLQKRGIQVPDERTLQKQVLQRL 103 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I+E L++QE ++ GI D V+ A ++ + ++K G+ +++ L Sbjct: 104 IMERLERQEADRMGIRVDEAQVDQAINMIASRNKITPAAMRAEIEKSGVTWEQYRKSLRD 163 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE----------------------- 177 + + + E+ A + + Sbjct: 164 DIRMDRLRQRAVDANIIISDAEVDAFLKDQERNPAAAQATRAPAPQQPQPQPRQPAQSGP 223 Query: 178 ---YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 L + ++ + ++K+ + + + + + G Sbjct: 224 AMLVLAQILVRVPEGSSPDQVAALRKKAEGLLARAKKGDDFASLAAANSDGPEALQGGMM 283 Query: 235 QYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK------------------ 275 F + S + + G + + D+ Sbjct: 284 GARPLDGWPDLFVKAAGSLSAGQVSGLVQSGNGFHILKVVDRAGGGQPAQAARPAPAPAP 343 Query: 276 ----------------RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + ++ + + + + ++++R Sbjct: 344 QQPSSFQEGPSVAAPQGPVRVTQTHARHILIKTSTVMTDDQARQRLEQIRER 395 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 46/137 (33%), Gaps = 2/137 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + + + Q+ + E + K + +++ G ++ Sbjct: 368 HARHILIKTSTVMTDDQARQRLEQIRERLQGGAVKFEDMARQYSQDSTAPQGGDLGWVNP 427 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKI 297 D P F+ + N + P ++ G I + ++R+ + + + Sbjct: 428 GDTVPPFEAAMNALQPNEISPPMLSPFGWHLIQVLERREHDVSDEVQRMRARQLLFERRA 487 Query: 298 EKHEAEYVKKLRSNAII 314 +++++LRS A I Sbjct: 488 VPAFEDWLEQLRSQAFI 504 >gi|308275078|emb|CBX31677.1| hypothetical protein N47_E51890 [uncultured Desulfobacterium sp.] Length = 316 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 30/291 (10%), Positives = 83/291 (28%), Gaps = 14/291 (4%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ----------KINGELEKIAVQELIVETLKKQE 89 +NG + ++ + I ++ ++K ++ LI + + QE Sbjct: 14 DEKAAVVNGMPVYREELDEEIIKIQKAILGYGKPLTVSKVKSVQKDVLESLIRQEILYQE 73 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 KSGI D +++ + ++ + + + L + + + Sbjct: 74 SLKSGIKPDEKSIDKEIKTLIGQFKSETDYKNALNRRNISPEMLRSRLLKNNVLQQYIGR 133 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE-ES 208 + ++ + + + + + ++R + + Sbjct: 134 LAEKTSVSDNDIIEYYQGRIELFKQPLQVRVSHIFIRTDPKWDAPRKQEERRKAEQILKD 193 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 + + + G Y+ L + ++ + K +N T G Sbjct: 194 IKQGKDFAVIAGEHSDGPTKTKGGDLGYIKMGQLDNKLEDAVFKLKTGELSNIVETDNGF 253 Query: 268 EYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 DK+ +K + K ++ + KLR A + Sbjct: 254 HIFKATDKKPETVLSYEDVKEKIRQFLHEEKAKREADQQAGKLREKATVEI 304 >gi|56697307|ref|YP_167673.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Ruegeria pomeroyi DSS-3] gi|56679044|gb|AAV95710.1| PPIC-type PPIASE domain [Ruegeria pomeroyi DSS-3] Length = 412 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 109/289 (37%), Gaps = 10/289 (3%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T +++ + + P+ + ++ + R +N VIT ++ +RI Sbjct: 1 MQQNLTTLSRCLARMMGAAALTLTLAGGPVAAQSLFSPAIR----VNQGVITHFELEQRI 56 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 L+++ +I G+ +K A + LI E LK Q +E++GI V A LS ++F Sbjct: 57 RLMEVLRIPGDPQKDARRSLIEEALKMQAVEEAGIEVAPEDVQLGIDDFAARARLSTDEF 116 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + L +G+ + +++ Q W D V F+ + EI ++ L Sbjct: 117 LAALANEGVSAETVRDFVSKQMAWRDYVSARFLARARPTPDEIDRALGLGGGGGLQVLLS 176 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 ++ P Q Q+ + + + ++ + G+ ++ + Sbjct: 177 EIIIPITPQTVDQVDEVAQQ-----IAALTSYEAFSSAAIQVSAAETRENGGRMPWIPLA 231 Query: 241 DLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 L P Q ++ + ++P V + R+ A + Sbjct: 232 QLPPALQPVILELEPGEISDPITLPNAVALFQMRGLREAAVGTPRYAAI 280 Score = 36.2 bits (81), Expect = 5.9, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 35/80 (43%), Gaps = 3/80 (3%) Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKG---VEYIAICDKRDLGGEIALKAYLSAQNTP 294 +++ L K T+ +T+ + ++ +C + G A + ++ T Sbjct: 330 KPAEIPQDIALELAKLDPGETSLALTRNNGQTLLFLMMCTRTRDLGGDASREDVANALTQ 389 Query: 295 TKIEKHEAEYVKKLRSNAII 314 +++ V++LR++AII Sbjct: 390 QRLQTLAESLVEQLRADAII 409 >gi|83953611|ref|ZP_00962332.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. NAS-14.1] gi|83841556|gb|EAP80725.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. NAS-14.1] Length = 405 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 99/270 (36%), Gaps = 6/270 (2%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + ++ + + S +N V+T+ ++ +R L++ G + A+ L Sbjct: 10 IAVLGLGLMTAAPVSAQNLFAPVAKVNESVVTEFEVQQRQRFLEVLNAPGATREGALTSL 69 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I E L+ + + ++GI + + A LS E+F+ L + G+ F+ ++ Sbjct: 70 IDERLRNEAVAEAGIELTPQGIEDSLAEFASRADLSTEEFTQALGQSGVSRETFRDFVVN 129 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 W ++V+ + + + EI + + VR + ++ + P + ++ Sbjct: 130 SVGWRELVRARYASRVQITDAEINRALGETQGSGVRVLVSEIIIPAPPQQAARVNALAEQ 189 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTN 259 + N ++++ G+ + +DL P Q L+ + T+ Sbjct: 190 -----ISQSKSTAEFSNYASRYSATASRGRGGRLPWQNLTDLPPSLQPLILNLAPGEVTD 244 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 P V + D + + + Sbjct: 245 PLPIPNAVALFQLRDIEETSVTAPTYSEIE 274 Score = 38.9 bits (88), Expect = 0.96, Method: Composition-based stats. Identities = 7/64 (10%), Positives = 24/64 (37%), Gaps = 2/64 (3%) Query: 253 SQNNTTNPYVTQKG--VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + G + + +C + A + ++ ++ + + +++LR+ Sbjct: 339 DTGEVSTTLTRANGQTLMLLMMCGRTAAANASASREDVTNALRQERLTGYAEQLLEQLRA 398 Query: 311 NAII 314 +A I Sbjct: 399 DARI 402 >gi|306820710|ref|ZP_07454338.1| peptidyl-prolyl cis-trans isomerase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551320|gb|EFM39283.1| peptidyl-prolyl cis-trans isomerase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 382 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 49/340 (14%), Positives = 110/340 (32%), Gaps = 45/340 (13%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + ++K+L + + + +I+ + IT GD K +A+ KLQ Sbjct: 1 MKRYLKILGVGLLSFTLLV------GCSDKGDKTLASIDNQKITYGDYLKEMAMYKLQVD 54 Query: 69 N---------------------------GELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 + ++ +I + + ++E++ +T D ++ Sbjct: 55 TTFASNPKFWEEKVPADQSVSGKETTVLENFKTELLENMIEDKIIEKEVKNLSLTVDDSS 114 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 V+ Q+ + + + F D + + + ++ DF K + Sbjct: 115 VDANVKQYTQILESAPDIKKYFADNKLDTNFIKAMSTKD--LVKAALEKDFTDKNQVTQA 172 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKL------QNQGFVQKRIKDAEESRLRLPKD 215 EI A +K K E + + + N +K+I + E + Sbjct: 173 EIDAYYEKNKAEFSNEQIRASHILIKTVNYDLSDMPKDKVEAAKKQIDEIYEKAIAGEDF 232 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICD 274 +++ + G Y + +F + + + P TQ G I + D Sbjct: 233 AELAKQYGQDGTKDTGGDLGYFTRDRMVKEFSDAAFALNIGEISKPVKTQWGYHIIKLVD 292 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K+ ++A +Y+K+L+ A I Sbjct: 293 KKSENVDVAQAKEYVKSLLQK---NKFNDYIKELKEKAKI 329 >gi|300724849|ref|YP_003714174.1| peptidyl-prolyl cis/trans isomerase [Xenorhabdus nematophila ATCC 19061] gi|297631391|emb|CBJ92088.1| peptidyl-prolyl cis-trans isomerase (PPIase), involved in maturation of outer membrane proteins [Xenorhabdus nematophila ATCC 19061] Length = 434 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 101/308 (32%), Gaps = 16/308 (5%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--------NGE 71 +L + V V+ + + +++ +N V+ + D+ + ++L Sbjct: 7 LILGLMFSVNSVAMAAPQVLNKVAAVVNNGVVLESDVDSLLQSVELNAKHAGQQIPDEKA 66 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L ++ LI++ + Q + IT T++ A LS L GI Sbjct: 67 LRHQILERLIMDDIVLQMANRMQITIPDQTLDSAIAGIAAQNHLSLAQLKQNLVADGISF 126 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + ++ + + +V N+ + L E+ + +++ ++ + IP + Sbjct: 127 DTYRNQIRKEMTISEVRNNEVRRRITILPQEVDSLTNQLEGQNNQDTELNISHILIPLPE 186 Query: 192 LQNQGFVQKRIKDAEESRLRLP---KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-Q 247 NQ V+K L ++ + G + +L F + Sbjct: 187 NPNQAQVEKAETTVRNILSELKNGVDFGKLAITYSGDTQALKGGNMGWNKLQELPSLFTE 246 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDK----RDLGGEIALKAYLSAQNTPTKIEKHEAE 303 L + P + G + + D R + ++ + +P + Sbjct: 247 QLQSAYKGQIIGPIRSGVGFHILKVNDTRGGNRSVAVTEVNARHILLKTSPVMNDDQARS 306 Query: 304 YVKKLRSN 311 + KLR Sbjct: 307 ELMKLREE 314 Score = 85.5 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 86/289 (29%), Gaps = 25/289 (8%) Query: 47 NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 N EV I ++ L+ Q I+ + E + T Sbjct: 144 NNEVRRRITILPQEVDSLTNQLEGQNNQDTELNIS-----HILIPLPENPNQAQVEKAET 198 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + +N + ++ + +Q + + Sbjct: 199 TVRNILSELKNGVDFGKLAITYSGDTQALKGGNMGWNKLQELPSLFTEQLQSAYKGQIIG 258 Query: 152 -FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 G +++ + +++ V E R +L +Q + +K EE Sbjct: 259 PIRSGVGFHILKVNDTRGGNRSVAVTEVNARHILLKTSPVMNDDQA-RSELMKLREEILS 317 Query: 211 RLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVE 268 ++++ + G+ + L S P F++ K + + P + G Sbjct: 318 GKTTFEKAAKEYSEDPGSAMRGGELGWNLPSAYDPAFRDALTKLQKGEISQPVHSAFGWH 377 Query: 269 YIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++LR++A + Sbjct: 378 VIQLLDSRKVDKTDAAQKDRAYRLLFNRKFNEEAQSWMQELRASAYVKI 426 >gi|163759891|ref|ZP_02166975.1| putative foldase/peptidyl-prolyl cis-trans isomerase [Hoeflea phototrophica DFL-43] gi|162282849|gb|EDQ33136.1| putative foldase/peptidyl-prolyl cis-trans isomerase [Hoeflea phototrophica DFL-43] Length = 283 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 32/308 (10%), Positives = 82/308 (26%), Gaps = 49/308 (15%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ---KIN 69 + L + +P + A + + G I ++ A L Q Sbjct: 3 LSQLAATLLFTSIAFLPAKGFAQEAD-DPVVAMVGGVEIRTSELQMAEADLDPQFERLPA 61 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + A+ +I ++ E + Sbjct: 62 EQRRVAALAAVIDIKALARKAEAEELDQTEEFKR-------------------------- 95 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + +++ + ++ + + +++ +++ E R +L D Sbjct: 96 ----LMAFQRDRALHNVLFRSGVVESISDADVKARYDQEVAATQAEEEISARHILVETED 151 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + ++ ++ + G Y + + P+F+ Sbjct: 152 EAKALITELDA-----------GKDFAELAKEKSTGPSAGNGGDLGYFTKGRMVPEFEAA 200 Query: 250 LKKSQNNTTN--PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + P TQ G I + D+RD ++ Q + + E +++ Sbjct: 201 AFALEKGQYGKEPVKTQFGWHVIKVEDRRDAAP--PPFEQVADQIRQVLLRERYGELIRE 258 Query: 308 LRSNAIIH 315 R N I Sbjct: 259 ARDNVDIE 266 >gi|152968631|ref|YP_001333740.1| peptidyl-prolyl cis-trans isomerase SurA [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893026|ref|YP_002917760.1| peptidyl-prolyl cis-trans isomerase SurA [Klebsiella pneumoniae NTUH-K2044] gi|330009278|ref|ZP_08306494.1| PPIC-type PPIASE domain protein [Klebsiella sp. MS 92-3] gi|150953480|gb|ABR75510.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238545342|dbj|BAH61693.1| peptidyl-prolyl cis-trans isomerase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|238774029|dbj|BAH66526.1| peptidyl-prolyl cis-trans isomerase [Klebsiella pneumoniae NTUH-K2044] gi|238774061|dbj|BAH66557.1| peptidyl-prolyl cis-trans isomerase [Klebsiella pneumoniae] gi|328534855|gb|EGF61397.1| PPIC-type PPIASE domain protein [Klebsiella sp. MS 92-3] Length = 428 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 105/311 (33%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ + ++ A+ ++ + S L +GI N Sbjct: 67 RHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPD 189 ++ + + + +V N+ + L E+ + + L ++ + Sbjct: 127 TYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPEN 186 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 Q++ E +++ + G+ + +L F Sbjct: 187 PTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P + Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AAEIK 315 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 89/287 (31%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q + + L + E S + Sbjct: 143 NNEVRRRITV--LPQEVEALAKQIGDQNDASTELN-LSHILIPLPENPTSDEVAAAQEQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V+ ARN + ++ Q + IQ + + Sbjct: 200 NSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + +NI+V E R +L Q K + A E + Sbjct: 260 RSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQ-AKLEQIAAEIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 + ++ G + P F++ ++ ++ T+ P + G I Sbjct: 319 ITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLI 378 Query: 271 AICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R + + A K K + A ++++ R++A + Sbjct: 379 ELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKI 425 >gi|85712920|ref|ZP_01043960.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Idiomarina baltica OS145] gi|85693226|gb|EAQ31184.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Idiomarina baltica OS145] Length = 624 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 34/401 (8%), Positives = 96/401 (23%), Gaps = 94/401 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ F +++ F + + SY ++ +N I+ + + Sbjct: 1 MLERIREGSQSFTAKAVLVLIILTFALAGVGSY-VTGGATTTVAEVNDAEISQQALERAY 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + +++LI + L Q G+ + V Sbjct: 60 ENERNRLQEQFGDMFEAVSSQPGYMQSVRANVLEQLIQQELLVQYARDHGMRVSAARVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + + L G F L I + + Sbjct: 120 EIRDIPAFRSAGQFDNDIYLMALRNAGYTPEQFATVLRDDLIRSQIAQAIGATEFALPAE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITV------------- 175 +F+ + + +I + + Sbjct: 180 ALALQRLQKQTRSGAYIIAENANFVDQVELSDSDIENYYNENQQQFQTPEQLKVAFVQLS 239 Query: 176 -----------------------REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 +Y + Q++ ++A Sbjct: 240 KAELYNDVKVSDDEVKAYYQGSIDQYRTDEERRVAHILIESDSDNAQEKAQEALAQLNDG 299 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEY 269 ++++ G ++ + + F N ++ + ++ T G Sbjct: 300 ADFAAIAKEYSDDTFSAEQGGDLDWITKGSMDEDFDNAAFALENVGDVSDIVETSFGYHI 359 Query: 270 IAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 I + D R ++ + + + +++ E +KL Sbjct: 360 IKLLDVRPGEVTPFEDVAGEIRQKLKAQQVDDKYFELQQKL 400 >gi|157147527|ref|YP_001454846.1| peptidyl-prolyl cis-trans isomerase SurA [Citrobacter koseri ATCC BAA-895] gi|157084732|gb|ABV14410.1| hypothetical protein CKO_03327 [Citrobacter koseri ATCC BAA-895] Length = 428 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 103/311 (33%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ + Sbjct: 67 RHQILERLIMDQIVLQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLSYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPD 189 ++ + + I +V N+ + L E+ + + L ++ + Sbjct: 127 TYRSQIRKEMIISEVRNNEVRRRVTILPQEVDALAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + R + + +++ + G+ + +L F Sbjct: 187 PTSDQVSEAEARARSIVDEARNGSDFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R + ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMTDQQARLK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEEI--AADIK 315 Score = 83.6 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 95/309 (30%), Gaps = 26/309 (8%) Query: 28 VPIVSYKSWAMSSRIRTTI-NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELI 81 + +Y+S I + + N EV I ++ + Q L Sbjct: 123 LSYSTYRSQIRKEMIISEVRNNEVRRRVTILPQEVDALAQQVGNQNDASTELN-----LS 177 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + E S ++ V ARN + ++ Q + IQ Sbjct: 178 HILIPLPENPTSDQVSEAEARARSIVDEARNGSDFGKLAITYSADQQALKGGQMGWGRIQ 237 Query: 142 SIWPDVVKND-----------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + + G +++ + + ++I+V E R +L Sbjct: 238 ELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPI 297 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL 249 +Q K + A + + ++F+ G + P F++ Sbjct: 298 MT-DQQARLKLEEIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWAAADIFDPAFRDA 356 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + ++ + P + G I + D R++ + A K K + A ++++ Sbjct: 357 LTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAATWMQE 416 Query: 308 LRSNAIIHY 316 R++A + Sbjct: 417 QRASAYVKI 425 >gi|253689994|ref|YP_003019184.1| Peptidylprolyl isomerase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756572|gb|ACT14648.1| Peptidylprolyl isomerase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 431 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 100/309 (32%), Gaps = 16/309 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ + ++ + + ++ ++ V+ + D++ + +KL L Sbjct: 7 LILGLALSASTAFAAPQVVDKVAAVVDNSVVLESDVNSLLQSVKLNAQQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 LI++ + Q +K GI + A +S + S L +G+ N Sbjct: 67 RHQITDRLIMDNIILQMAQKMGIQVTDEQLEQAITNIAAQNRMSLDQLKSQLAYEGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L E+ +++ N T + IP + Sbjct: 127 TYRSQIRKEMLISEVRNNEVRRRVTVLPQEVDTLAKQIANQTGENDELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDA---EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 Q V + A + +++ + G+ + ++ F + Sbjct: 187 PTQQQVDEAENLATSLVKQISEGADFGKLAITYSADSQALKGGQMGWGKLQEIPTLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 L + + P + G + + D R + ++ + + + Sbjct: 247 LTQAQKGQVVGPIRSGVGFHILKVNDIRGGNKSVSVTETHARHILIKPSVVMTDSQAQAK 306 Query: 305 VKKLRSNAI 313 + + Sbjct: 307 LADVAQQIK 315 Score = 83.6 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 56/167 (33%), Gaps = 4/167 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + K+++V E R +L +Q K A++ + Sbjct: 259 IRSGVGFHILKVNDIRGGNKSVSVTETHARHILIKPSVVMTDSQAQ-AKLADVAQQIKNG 317 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEY 269 + + + G + P F++ L K + + P + G Sbjct: 318 STDFAAQAKLLSQDPGSANQGGDLGWASPDMYDPAFRDALLKLKKGEISQPIHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + D R + + A K K + ++++ R++A + Sbjct: 378 IQLLDTRQVDKTDAAQKEQAYRMIFNRKFAEEAQTWMQEQRASAYVK 424 >gi|50122778|ref|YP_051945.1| peptidyl-prolyl cis-trans isomerase SurA [Pectobacterium atrosepticum SCRI1043] gi|81693097|sp|Q6D0E2|SURA_ERWCT RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|49613304|emb|CAG76755.1| survival protein [Pectobacterium atrosepticum SCRI1043] Length = 431 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 101/309 (32%), Gaps = 16/309 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ + ++ + + ++ ++ V+ + D++ + +KL L Sbjct: 7 LILGLALSASTAFAAPQVVDKVAAVVDNSVVLESDVNSLLQSVKLNAQQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 LI++ + Q +K GI ++ A +S + S L +G+ N Sbjct: 67 RHQITDRLIMDNIILQMAQKMGIQVTDEQLDQAITNIAAQNRMSIDQLKSQLANEGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L E+ +++ N T + +P + Sbjct: 127 TYRSQIRKEMLISEVRNNEVRRRVTVLPQEVDTLAKQIANQTGENDELNLSHILLPLPEN 186 Query: 193 QNQGFVQKRIKDA---EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 Q V + A + ++S + G+ + ++ F + Sbjct: 187 PTQQQVDEAENLATSLVKQISEGADFGKLAITYSSDSQALKGGQMGWGKLQEIPTLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 L + + P + G + + D R + ++ + + + Sbjct: 247 LTQVQKGQVVGPIRSGVGFHILKVNDIRGGNKSVSVTETHARHILIKPSVVMTDSQAQAK 306 Query: 305 VKKLRSNAI 313 + + Sbjct: 307 LADVAQQIK 315 Score = 83.6 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 55/167 (32%), Gaps = 4/167 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + K+++V E R +L +Q K A++ + Sbjct: 259 IRSGVGFHILKVNDIRGGNKSVSVTETHARHILIKPSVVMTDSQAQ-AKLADVAQQIKNG 317 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEY 269 + + + G + P F++ L K + + P + G Sbjct: 318 STDFAAQAKLLSQDPGSANQGGDLGWASPDMYDPAFRDALLKLKKGEISQPIHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + D R + + A K K + ++++ R+ A + Sbjct: 378 IQLLDTRQVDKTDAAQKEQAYRMIFNRKFAEEAQTWMQEQRAAAYVK 424 >gi|77917708|ref|YP_355523.1| parvulin-like peptidyl-prolyl isomerase [Pelobacter carbinolicus DSM 2380] gi|77543791|gb|ABA87353.1| parvulin-like peptidyl-prolyl isomerase [Pelobacter carbinolicus DSM 2380] Length = 307 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 36/286 (12%), Positives = 86/286 (30%), Gaps = 20/286 (6%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKI------NGELEKIAVQELIVETLKKQEIEKS 93 S++ I+G ++ A + + L + + + I L E + Sbjct: 28 SQVLLRIDGRTVSLEQFQHDFAQILPRDRVLPKDEEQALRRSYLAQRIDHELLLAEATRR 87 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 ++ + H + DF L QG+ +++ L Q + V+ Sbjct: 88 KLSVTPAELQQAIASHLDR--YPSGDFERMLADQGLAVEDWQRLLQEQLLVEKVLALMVR 145 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 K + EI A + R ++ ++PD + + + A E + Sbjct: 146 DKVDIADEEINAYFAAHRQSFARPEQVKARQITVPD---------EAQGRQALEMLRQGT 196 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAI 272 + + G ++ F + + ++ + G + Sbjct: 197 PFAEVARRCSISPDADQGGDMGTFARGEMPEAFDKAVFGLPAGRISDLTESDYGYHIFLV 256 Query: 273 CDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ + AQ + E+ ++++ LR A I Sbjct: 257 EQHLPARPPDLDTVRGEIVAQLRKQQEEQLYQDWLQSLRQEAAIEI 302 >gi|126728790|ref|ZP_01744605.1| PPIC-type PPIASE domain [Sagittula stellata E-37] gi|126710720|gb|EBA09771.1| PPIC-type PPIASE domain [Sagittula stellata E-37] Length = 412 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 96/248 (38%), Gaps = 4/248 (1%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +N +VIT ++ +R +L++ + G+L K+A ++LI + L+ Q +GI + Sbjct: 35 AVIVNEQVITGYELEQRKRMLQVMRAPGDLNKVAREQLIDDRLRLQAARDAGIQPSPEEL 94 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + A L+ E F+ L + G+ + ++ ++ W +V+ F + E E Sbjct: 95 LDGMEEFASRASLTREQFTQALAQAGVDEETYRDFVRAGLSWRMLVQQRFAGRANVSEDE 154 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + +N T +R +L I Q V + + +F Sbjct: 155 VDRALSSGQNGTST---VRVLLSEIIMPMPPGQEEVVRERAQRIAQLDDTGAFSAQARRF 211 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 ++ + G+ + S+L P Q ++ + ++P Q + + + + Sbjct: 212 SATASRGAGGQLPWRSLSELPPPLQPIVLGLAPGEVSDPIPLQGAMALFQLRAIEEGEYQ 271 Query: 282 IALKAYLS 289 A + Sbjct: 272 PPATAAVE 279 Score = 40.0 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 26/87 (29%), Gaps = 5/87 (5%) Query: 233 KAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKG--VEYIAICDKRDLGGEIAL--KAY 287 L +++ K + G + + +C + E + Sbjct: 323 DRGTLPVNEIPTDIAYELSKLDPGEVSTALTRADGQTLVLLMLCGRTAGVAEEEAPDREQ 382 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAII 314 + +I Y+ +LRS+A I Sbjct: 383 VFGALRNQRIGSLADGYLAQLRSDATI 409 >gi|84684877|ref|ZP_01012777.1| Probable PpiC-type peptidyl-prolyl cis-trans isomerase [Maritimibacter alkaliphilus HTCC2654] gi|84667212|gb|EAQ13682.1| Probable PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacterales bacterium HTCC2654] Length = 414 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 109/279 (39%), Gaps = 5/279 (1%) Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66 T + + + T ++ S + +N +T + ++R+A L++ Sbjct: 8 TRRNGWAGRILTLCASAALGMMMAGSPATAQGQFVPVAKVNDSAVTVYERNQRMAFLRIL 67 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 G++ ++A+ +LI E ++ E E+ GIT D V + A L E F +FL + Sbjct: 68 NAPGDITQLALDQLINERIQLAEAERMGITADPEAVQNGMAEFAARGNLDVEQFGAFLAQ 127 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 GI F+ ++ +W +V + F+ + E EI + + ++L+ ++ Sbjct: 128 AGIAFETFRDFVTAGIVWREVARAKFLPQVSITESEIDRAYAEAEPQPGEKFLLTEIVLP 187 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + + D + + ++F+ ++ G+ ++ L PQ Sbjct: 188 ASSDLSL---KASRARADRLSKITTAEEFADAAKRFSVVPSRLNAGERDWVDVQALPPQA 244 Query: 247 QNLLK-KSQNNTTNPYVTQK-GVEYIAICDKRDLGGEIA 283 Q+ ++ + + P + GV + D+ + Sbjct: 245 QSAVRATREGRASRPVIIPDVGVAVYFVRDRETIRSTKV 283 Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 253 SQNNTTNPYVTQKG-VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + G + ++ +C++R+ + +A ++ +I + + + LR+N Sbjct: 348 DPGEVSTRLTAGNGTLVFLMLCNRRNDVPDSVSRAQIADALRNQRIGAYANDLLADLRAN 407 Query: 312 AIIHY 316 A I Y Sbjct: 408 AHIEY 412 >gi|283783842|ref|YP_003363707.1| chaperone precursor (peptidyl-prolyl cis-trans isomerase) [Citrobacter rodentium ICC168] gi|282947296|emb|CBG86841.1| chaperone precursor (peptidyl-prolyl cis-trans isomerase) [Citrobacter rodentium ICC168] Length = 428 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 104/311 (33%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNASQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ AR ++ + S L G+ + Sbjct: 67 RHQILERLIMDQIVLQMGQKMGVKISDEQLDQAIANIARQNNMTLDQMRSRLAYDGLNYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPD 189 ++ + + I +V N+ + L E+ + + L ++ + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRVTILPQEVEALAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + + + +++ + G+ + +L F Sbjct: 187 PTSDQVSEAEAQARSIVDQARSGSDFGKLAIAYSADQQALKGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R + ++ + +P ++ + Sbjct: 247 LSTAKKGDVVGPIRSGVGFHILKVNDMRGQNQSISVTEVHARHILLKPSPIMTDQQARQK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 87/289 (30%), Gaps = 25/289 (8%) Query: 47 NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 N EV I ++ + Q L + E S ++ Sbjct: 143 NNEVRRRVTILPQEVEALAQQVGNQNDASTELN-----LSHILIPLPENPTSDQVSEAEA 197 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 V AR+ + ++ Q + IQ + + Sbjct: 198 QARSIVDQARSGSDFGKLAIAYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDVVG 257 Query: 152 -FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 G +++ + + ++I+V E R +L +Q QK + A + + Sbjct: 258 PIRSGVGFHILKVNDMRGQNQSISVTEVHARHILLKPSPIMT-DQQARQKLEQIAADIKS 316 Query: 211 RLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVE 268 ++F+ G + P F++ + ++ + P + G Sbjct: 317 GKTTFAAAAKEFSQDPGSANQGGDLGWAAADIFDPAFRDALTRMNKGQISAPVHSSFGWH 376 Query: 269 YIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + A ++++ R++A + Sbjct: 377 LIELLDTRSVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKI 425 >gi|262044914|ref|ZP_06017956.1| peptidylprolyl cis-trans isomerase SurA [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037641|gb|EEW38870.1| peptidylprolyl cis-trans isomerase SurA [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 428 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 105/311 (33%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ + ++ A+ ++ + S L +GI N Sbjct: 67 RHQILERLIMDQIVLQMGQKMGVKISEDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPD 189 ++ + + + +V N+ + L E+ + + L ++ + Sbjct: 127 TYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPEN 186 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 Q++ E +++ + G+ + +L F Sbjct: 187 PTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P + Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AAEIK 315 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 89/287 (31%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q + + L + E S + Sbjct: 143 NNEVRRRITV--LPQEVEALAKQIGDQNDASTELN-LSHILIPLPENPTSDEVAAAQEQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V+ ARN + ++ Q + IQ + + Sbjct: 200 NSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + +NI+V E R +L Q K + A E + Sbjct: 260 RSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQ-AKLEQIAAEIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 + ++ G + P F++ ++ ++ T+ P + G I Sbjct: 319 ITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLI 378 Query: 271 AICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R + + A K K + A ++++ R++A + Sbjct: 379 ELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKI 425 >gi|187477204|ref|YP_785228.1| peptidyl-prolyl cis-trans isomerase [Bordetella avium 197N] gi|122070624|sp|Q2KXA6|SURA_BORA1 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|115421790|emb|CAJ48301.1| survival protein (peptidyl-prolyl cis-trans isomerase) [Bordetella avium 197N] Length = 506 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 32/332 (9%), Positives = 91/332 (27%), Gaps = 55/332 (16%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLK--------LQKINGELEKIAVQELIVETLK 86 I +N +VIT ++ + K + L+K +Q LI + L+ Sbjct: 51 GEQFVDGIAAIVNKDVITMREVQDGVKRAKVDLKERGIQLPDDNVLQKQVLQRLIFDRLE 110 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 +QE ++ GI D V A L+ + + ++K G+ + +++ L + Sbjct: 111 RQEADRLGIRVDDAQVTQAINMVASRNKLTPQQLRAEVEKNGLSWDDYRKSLREEIRTDR 170 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI---------------------RTVLF 185 + + + E+ A + + + ++ Sbjct: 171 LRQRTIDNHIIITDAEVDAYLKDQARNPALQPQSAQAPVQEAPAAATGPVMLALGQILVR 230 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 ++K+ +D R + + + G Sbjct: 231 VPEGASPDTVASLRKKAEDILARLKRGDDFASVAAASSDGPEALEGGVMGVRPIDGWPDL 290 Query: 246 F-QNLLKKSQNNTTNPYVTQKGVEYIAICDK-------------------------RDLG 279 F + + + + G + + + + Sbjct: 291 FVKAVSNVPAGQVSGIIQSGNGFHILKVLQRGQAGAPAPARAAAPMPAPAAGRAAQGPVQ 350 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ + + ++ + ++++R Sbjct: 351 VTQTHARHILIKTSAVMSDQQARQRLEQVRQR 382 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 13/137 (9%), Positives = 44/137 (32%), Gaps = 2/137 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + + +Q Q+ + + K + +++ G ++ Sbjct: 355 HARHILIKTSAVMSDQQARQRLEQVRQRLESGSAKFEDMARQYSQDATAPQGGDLGWVNP 414 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKI 297 ++ P F+ + + P + G + + ++R + + + Sbjct: 415 GEMVPSFEAAMNSLKPGEISQPVESPFGWHLVQVLERRQKDVTDEMQRMQARQALFERRA 474 Query: 298 EKHEAEYVKKLRSNAII 314 +++++LR+ A I Sbjct: 475 GPAFEDWMEQLRAQAYI 491 >gi|262372454|ref|ZP_06065733.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter junii SH205] gi|262312479|gb|EEY93564.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter junii SH205] Length = 442 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 32/322 (9%), Positives = 100/322 (31%), Gaps = 18/322 (5%) Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66 T+L + + ++ ++ + + + ++ VI D+ + IA + Q Sbjct: 3 TTLMKINSIQHIFRATVLAALISSSMHSFAQPTDEVVAIVDNSVILKSDLEQGIAETEHQ 62 Query: 67 KINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-- 116 L+ + +LI+ + +++++ GI D ++N ++ A +G + Sbjct: 63 LKAQNKTVPPQQYLQMQVLDQLIIRQAQLEQVKRYGIKADEKSLNAAVLKVANQSGATTL 122 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + + +A + + M + ++++ + Sbjct: 123 EAFQQKLDAIAPGTYENLRNRIAEDLAIGRLRQQQVMSRIKISDLDVENFLNSPEGQAAL 182 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + I + N QK + + + K ++ V + Sbjct: 183 GTQAHVIHMRISGD---NAAEAQKVALEVKNALTNSDDPKAISSKLSTSSVKVDGADMGF 239 Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD----LGGEIALKAYLSAQ 291 S++ + + TT + G+ + + +++ + ++ Q Sbjct: 240 RSLSEIPTELAARITPLKIGQTTELINVRDGIHVLKLLERKQNDQKALVDQYQTRHILIQ 299 Query: 292 NTPTKIEKHEAEYVKKLRSNAI 313 + + + L + A Sbjct: 300 PSEVVSLDRAKQMIDSLYNRAK 321 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 16/141 (11%), Positives = 47/141 (33%), Gaps = 3/141 (2%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 +T I +++ + ++ I +++ G ++ Sbjct: 290 QYQTRHILIQPSEVVSLDRAKQMIDSLYNRAKAGEDFATLAATYSNDTGSARDGGSLGWV 349 Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPT 295 + +F+ +K + + P+ TQ G + + D R + + Sbjct: 350 SPGVMVAEFEQTMKNTPVGQISKPFQTQFGWHILQVMDTRQQDMTKEVQERMARQILGER 409 Query: 296 KIEKHEAEYVKKLRSNAIIHY 316 + + ++++LR+NA + Sbjct: 410 QFDTEVDTWMRELRANAYVEI 430 >gi|83309610|ref|YP_419874.1| parvulin-like peptidyl-prolyl isomerase [Magnetospirillum magneticum AMB-1] gi|82944451|dbj|BAE49315.1| Parvulin-like peptidyl-prolyl isomerase [Magnetospirillum magneticum AMB-1] Length = 320 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 84/311 (27%), Gaps = 50/311 (16%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 +K+L ++ + ++ + + +NG I + A Q Sbjct: 45 RSLMKMLFARRPMLALSLAAGLAASPAIAADSVVANVNGSDIKMSQL----AEYGRQMGP 100 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + ++ I L ++ ++ + D + Sbjct: 101 QAPYEAVLEVAINNQLVYEQAKRDKLDADPDVKAAL------------------------ 136 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + + IQ + +++ + +++ ++ E R +L Sbjct: 137 ------KRVEIQLMAQALMQKKVRGAVTDEAVKVRYDQAVKNFQPQEEVHARHIL----- 185 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN 248 ++ + R + + G Y ++ + P+F Sbjct: 186 ------AETEEGARSIIADLNRGMDFAELAKTRSKDTGSGAMGGDLGYFVQGAMVPEFAA 239 Query: 249 LLK-KSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 + P TQ G I + DKR I E+ + + V Sbjct: 240 AAFAMRPGELSKTPVKTQFGYHVIKVEDKRMAS--IPPYDQAKPVIARQIAEELQEKMVV 297 Query: 307 KLRSNAIIHYY 317 +LR A I + Sbjct: 298 ELREKAKIKRF 308 >gi|213161291|ref|ZP_03347001.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 399 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 112/311 (36%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ + Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190 ++ + + I +V N+ + L E+ A + +N E + +L ++P+N Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDASTELNLSHILIALPEN 186 Query: 191 KLQNQGFVQKRIKDAE-ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 Q +R ++ E +++ + G+ + +L F Sbjct: 187 PTSEQVNDAQRQAESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R + ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMNDQQARLK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEEI--AADIK 315 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 76/256 (29%), Gaps = 20/256 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q + L + E S D+ Sbjct: 143 NNEVRRRITV--LPQEVDALAKQIGTQNDASTELN-LSHILIALPENPTSEQVNDAQRQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V+ ARN + ++ Q + IQ + + Sbjct: 200 ESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + ++I+V E R +L +Q K + A + + Sbjct: 260 RSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMN-DQQARLKLEEIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270 ++++ G + P F++ L K + P + G I Sbjct: 319 TTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLI 378 Query: 271 AICDKRDLGGEIALKA 286 + D R + A + Sbjct: 379 ELLDTRKVDKTDAAQK 394 >gi|83942391|ref|ZP_00954852.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. EE-36] gi|83846484|gb|EAP84360.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. EE-36] Length = 405 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 99/270 (36%), Gaps = 6/270 (2%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + ++ + + S +N V+T+ ++ +R L++ G + A+ L Sbjct: 10 IAVLGLGLMTAAPVSAQNLFAPVAKVNESVVTEFEVQQRQRFLEVLNAPGATREGALTSL 69 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I E L+ + + ++GI + + A LS E+F+ L + G+ F+ ++ Sbjct: 70 IDERLRNEAVAEAGIELTPQGIEDSLAEFASRADLSTEEFTQALGQSGVSRETFRDFVVN 129 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 W ++V+ + + + EI + + VR + ++ + P + ++ Sbjct: 130 SVGWRELVRARYASRVQITDAEINRALGETQGSGVRVLVSEIIIPAPPQQAARVNALAEQ 189 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTN 259 + N ++++ G+ + +DL P Q L+ + T+ Sbjct: 190 -----ISQSKSTAEFSNYASRYSATASRGRGGRLPWQNLTDLPPSLQPLILNLAPGEVTD 244 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 P V + D + + + Sbjct: 245 PLPIPNAVALFQLRDIEETSVAAPTYSEIE 274 Score = 38.9 bits (88), Expect = 0.96, Method: Composition-based stats. Identities = 7/64 (10%), Positives = 24/64 (37%), Gaps = 2/64 (3%) Query: 253 SQNNTTNPYVTQKG--VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + G + + +C + A + ++ ++ + + +++LR+ Sbjct: 339 DTGEVSTTLTRANGQTLMLLMMCGRTAAANASASREDVTNALRQERLTGYAEQLLEQLRA 398 Query: 311 NAII 314 +A I Sbjct: 399 DARI 402 >gi|296101217|ref|YP_003611363.1| peptidyl-prolyl cis-trans isomerase SurA [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055676|gb|ADF60414.1| peptidyl-prolyl cis-trans isomerase SurA [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 428 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 103/311 (33%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ +V S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGVAMVANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMKSVKLNSGQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L GI + Sbjct: 67 RHQILERLIMDQIVLQMGQKMGVKITDEQLDQAIANIAKQNNMTLDQMRSRLAYDGISYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPD 189 ++ + + + +V N+ + L E+ + + L ++ + Sbjct: 127 TYRNQIRKEMLISEVRNNEVRRRVTILPQEVDALAKQVGNQNDASTELNLSHILIPLPEN 186 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + + E +++ + G+ + +L F Sbjct: 187 PTSDQAAEAESQARAIVEQARNGSDFGKLAITYSADQQALKGGQMGWGRIQELPSIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P + Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQNISVTEVHARHILLKPSPIMTDDQARAK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LQQI--AADIK 315 Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 91/288 (31%), Gaps = 25/288 (8%) Query: 47 NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 N EV I ++ + Q L + E S ++ + Sbjct: 143 NNEVRRRVTILPQEVDALAKQVGNQNDASTELN-----LSHILIPLPENPTSDQAAEAES 197 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 V+ ARN + ++ Q + IQ + + Sbjct: 198 QARAIVEQARNGSDFGKLAITYSADQQALKGGQMGWGRIQELPSIFAQALSTAKKGDIVG 257 Query: 152 -FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 G +++ + + +NI+V E R +L +Q K + A + + Sbjct: 258 PIRSGVGFHILKVNDLRGQSQNISVTEVHARHILLKPSPIMTDDQA-RAKLQQIAADIKS 316 Query: 211 RLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVE 268 N ++F+ G + P F++ +K ++ + P + G Sbjct: 317 GKTSFANAAKEFSQDPGSANQGGDLGWAAADIYDPAFRDALMKLNKGQMSAPVHSSFGWH 376 Query: 269 YIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + D R++ + A K K + A ++++ R++A + Sbjct: 377 LIELLDTRNVDKTDAAQKDRAYRMLFNRKFSEEAATWMQEQRASAYVK 424 >gi|89054302|ref|YP_509753.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Jannaschia sp. CCS1] gi|88863851|gb|ABD54728.1| PPIC-type PPIASE domain [Jannaschia sp. CCS1] Length = 422 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 90/280 (32%), Gaps = 6/280 (2%) Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63 ++ + L T+ L P +N ++T+ +I +RI L Sbjct: 10 RLRQMTRLWSAL--TFLCLGCALSAPFGGQAHAQNPFSAAVEVNDTIVTNFEIGQRIRFL 67 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 ++ G+L + A++ L+ E L+ G + + A L E F Sbjct: 68 QVLNAQGDLREQAIEALVNERLQLDAALAVGAEASPEAIETGLEEFAGRANLGPEQFLRQ 127 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + ++GI + ++A W +VV+ F E ++ + + ++ Sbjct: 128 MAQEGIAPETVRDFVANGITWRNVVRARFGPTIDITEEDVERALELGTVLGGGIEILLAE 187 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 + Q + + + + + +F++ + G + +L Sbjct: 188 IIIPVTPDNQANLESE-LSRLGRDVAGNVERFSEAARRFSAAPTREAGGVTGWRPLGELP 246 Query: 244 PQFQNLLKKSQN-NTTNPYVTQKG--VEYIAICDKRDLGG 280 ++ + T+P G +R++ Sbjct: 247 EGLRDRFMQMGYAQVTDPVSLGGGQAFALFQYRGQREVTS 286 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Query: 237 LLESDLHPQFQNLLKKSQNNTTNPYVTQKG---VEYIAICDKRDLGGEIALKAYLSAQNT 293 + S + ++ N+ + VT+ G + + +CD+ E + + Q Sbjct: 339 VPPSQVPEDIALAIRTLDNHEMSTAVTRNGGTVLLAVMLCDRVSAEPEAGV-DRIREQLF 397 Query: 294 PTKIEKHEAEYVKKLRSNAIIHY 316 ++++ A Y+++LR+ A I+Y Sbjct: 398 GQQLQRLAANYLEELRAEARINY 420 >gi|170740805|ref|YP_001769460.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium sp. 4-46] gi|168195079|gb|ACA17026.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium sp. 4-46] Length = 295 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 35/300 (11%), Positives = 75/300 (25%), Gaps = 45/300 (15%) Query: 21 VLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAV 77 L++ +P V+ + A + + +NG +T Sbjct: 12 ALVLGLALPAVAQTAPAPNPAPDTVVARVNGSPVTAA----------------------- 48 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 + + S V + + L A+ + Y Sbjct: 49 ----DLAVAADDPALSLPGVSDEQKKGLLVDYMVDLKLGAQAAEKAKVAESPDFTRKLAY 104 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 + + + ++ + + E R +L + + Sbjct: 105 FRDKLLLDEYLEREAKKAVTPEAARKLYDDTVKTLKPEEEVHARHILV----DNEADAKK 160 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 + R + + G + + + P F + K Q Sbjct: 161 IAAR-------IKGGEDFSKVAAETSKDPGSKAEGGDLGWFTKERMVPAFAEAAFKLDQG 213 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++P TQ G I + +KR + Q K + + + KLR A I Sbjct: 214 KVSDPVRTQFGWHVIKVEEKRTKPV--PGFDEMKEQIDTYLTRKTQQDIITKLREQAKIE 271 >gi|242279456|ref|YP_002991585.1| SurA domain protein [Desulfovibrio salexigens DSM 2638] gi|242122350|gb|ACS80046.1| SurA domain protein [Desulfovibrio salexigens DSM 2638] Length = 312 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 100/316 (31%), Gaps = 19/316 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ------ 66 +K + F+ + + + I +NGEV+T ++++++A + Q Sbjct: 1 MKRIIAGFLASMIIGSASFATAEEKVVDGIVAVVNGEVVTMYELNRKLAPIMKQFDGKSL 60 Query: 67 -----KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 + + + + I E + QE ++ + + V+ + LS EDF Sbjct: 61 SAVEAEQLKRVRQQILDRFINEIIIDQESKRLKVDVSAQDVDNEVKAIKEKSNLSDEDFE 120 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 L+ Q FK+ + ++ K + EI A + Sbjct: 121 RQLELQKTNLAAFKEKIGKDIRKHRLLSYKVKSKVVVTDDEIKAAWNSTRTDQGEVAKSV 180 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + + + ++ + +K +G ++ + Sbjct: 181 HLKLILFPENVSADQVREQI----VAGETTFEEAADKYTTGPGSGSGGDLGVLEWNDLAQ 236 Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEK 299 + L + P+ Q + + + K + + K ++ Sbjct: 237 --TWHEALTGLKPGGISQPFEVQSFKALLKLDSYVNTEAASFEDSKQEIYQKLYRQKQDE 294 Query: 300 HEAEYVKKLRSNAIIH 315 A+++KKLR A+I Sbjct: 295 LFADFIKKLREKAVIE 310 >gi|90424494|ref|YP_532864.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisB18] gi|90106508|gb|ABD88545.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisB18] Length = 310 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 83/302 (27%), Gaps = 33/302 (10%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK--IAV 77 ++ + A + + T+NG I + D+ ++ E + A+ Sbjct: 25 CFSVLLAATAGHTSGQSAPADPVIATVNGAPIHESDLQLADEMIGRNLPVQEKRERRDAL 84 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 L+++++ ++ K D + + + NH + Sbjct: 85 LTLVIDSMVLAQVAKDRKIADEADL----------------QRRASYARNQGLMNHLLEV 128 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 + Q++ D V+ + + + +L V N Sbjct: 129 VGQQAVTEDAVRKAYQEVVVKPATD-----------QIELHLRHLVFKFPDANDAAAASA 177 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 + + K A + + G + ++ ++ ++ Sbjct: 178 TEVKAKAAFARIDKGEDFAAVAADLSEDPATKARGGDFDWRTRPEMGKEYADVAFALKPG 237 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + ++R + + + V K RS A I Sbjct: 238 EVSAPIKTAFGWHIIKLEERRPRKP--VEFEKIRDRVAAMVANAARFDLVDKARSAATIE 295 Query: 316 YY 317 + Sbjct: 296 RF 297 >gi|163759133|ref|ZP_02166219.1| hypothetical protein HPDFL43_05195 [Hoeflea phototrophica DFL-43] gi|162283537|gb|EDQ33822.1| hypothetical protein HPDFL43_05195 [Hoeflea phototrophica DFL-43] Length = 283 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 66/280 (23%), Positives = 135/280 (48%), Gaps = 4/280 (1%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 +S I+ +N + IT DI++R+A L+LQ+ G L+ A ++LI E+LK QE + Sbjct: 2 AASEIKIVVNKQAITSVDIARRVAFLRLQRTGGNLQAKAREQLIEESLKYQEALRIRAVV 61 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 ++ + + ++ LS + + L++ G+ HFK ++ +Q WP VV+ G Sbjct: 62 SQAQIDASYARFGKSNNLSVKQLNQVLNQAGVTPQHFKDFIRVQMSWPRVVQALEGTSGG 121 Query: 158 NLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + + +K + I + + + ++ + R ++AE+ R R Sbjct: 122 GMSTQDLVSKMLERGDDKPSTTEYILQQVIFVVPSNKRSNATLNARKREAEQLRGRYQGC 181 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV-TQKGVEYIAICD 274 N + + DV++ +++ L P ++ L++K++ T P T +GVE+I IC Sbjct: 182 ENAAAAV-TGLRDVTLRNLGRIMQPQLPPDWKPLIEKTEAGATTPTRITDRGVEFIVICS 240 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + + A + A+N+ + +++ KLR +A+I Sbjct: 241 SKTVSDDRAAELVFRAENSDAGDSETAKKHLAKLRESAVI 280 >gi|304406731|ref|ZP_07388386.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus curdlanolyticus YK9] gi|304344264|gb|EFM10103.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus curdlanolyticus YK9] Length = 362 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 25/278 (8%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +NG IT+ + + + + G K + LI L KQE +K GI + Sbjct: 102 VAVVNGVRITERQLYEGL-------LGGGRGKTQLDNLIDTELVKQEADKKGIVVSDADI 154 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 R G + Q ++ + I ++ + + E Sbjct: 155 AAELAVMVRRIGSEEALNEALKQNQLTVEDLYP-----DLIQQVRLRKLLQSRIHITDQE 209 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + +R + + + ++ Sbjct: 210 VRDYYTENLEYITQPEQVRASHILVETKAEADIIVKE---------LNNGGDFATIAKQK 260 Query: 223 A-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL-- 278 + + G Y + F++ + P ++ G I + D + Sbjct: 261 SLDTGSKNAGGDLGYFERGVMDQSFEDAAFSLKVGEISKPVKSEFGYHIILVTDHKAAVT 320 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 KA + T KI + A +++ LR+ A I Sbjct: 321 PTFEEEKATIREMLTTEKIYELAATFIEGLRAQAKIEN 358 >gi|253698852|ref|YP_003020041.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21] gi|251773702|gb|ACT16283.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21] Length = 336 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 87/318 (27%), Gaps = 52/318 (16%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR------IRTTINGEVITDGDISKRIA- 61 L+ +L + K+ + +++ + +NG ITD D K A Sbjct: 18 LTVHFTKTAAVLLLALCVAATGCKQKAESEANKGPGSGIVLAEVNGAKITDNDFYKEQAA 77 Query: 62 ---LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 LK E +K + ++V L Q+ +K GI + Sbjct: 78 LPPYLKPMTETPEGKKEMLDTMVVRELILQQAKKDGIDNSPEVASKL------------- 124 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + L + I +K + ++ A +K K Sbjct: 125 -----------------EDLKKRVIVEAYLKKKVEESANISDADMKAFYEKNKEKFQSGA 167 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 +R + +K + G + Sbjct: 168 QVRASHILVKSEAEAKDVQ---------NQLKSGASFEELAKKHSIDGAAQKGGDLGWFS 218 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPT 295 + + P F+ + + T+ TQ G I R G +K + A P Sbjct: 219 KGSMIPDFEKVAFGLKEGETSGIVKTQFGYHIIKKTGDRPAGARSFEDVKDQIKAAMVPE 278 Query: 296 KIEKHEAEYVKKLRSNAI 313 + ++ +L+ +A Sbjct: 279 RQQETFKNLKDELKKSAK 296 >gi|148261608|ref|YP_001235735.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidiphilium cryptum JF-5] gi|146403289|gb|ABQ31816.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidiphilium cryptum JF-5] Length = 427 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 92/290 (31%), Gaps = 12/290 (4%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--- 65 + F+ ++ + + + A ++ I +NG VIT+ D++ R L L Sbjct: 1 MKSFVSY---AALIGLAAGLLAPGAPARAQTASIAAVVNGTVITNADVAARTRLFALSAG 57 Query: 66 ----QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 L+ +ELI ++L+ Q IE++ + + + L Sbjct: 58 LPTTSATLQRLKPQITRELIDQSLQLQAIERNKVVVPEAKIAAALKRVNEANHLPPGSLQ 117 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 L GI + Q W DV++ +I A + MK + Sbjct: 118 KKLAAAGIPLSTLVSQFRTQIGWTDVLRKKLGPDLRPTAADIAAEEAAMKKEIGKTQYHI 177 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 +F +N + ++ +F+ ++ G ++ Sbjct: 178 AEIFIPVENP-ADVANARRFADVVIRQLRAGAPFPVVAAQFSQSQSALTGGDRGWVQPDL 236 Query: 242 LHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 L P + +++K ++P G E + R G + Sbjct: 237 LDPAVRRIVEKMPVGAISDPVRVAGGFEIVNQLGIRQFGVGQRTTLSIRQ 286 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 8/63 (12%), Positives = 21/63 (33%) Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + P V+ G+ + +C + + K + ++ + L +A I Sbjct: 362 GQPSEPLVSSSGIAIVMVCKRETSKIGLPGKKAIEEMLINRRVSLEAQRLMDTLHRDAEI 421 Query: 315 HYY 317 + Sbjct: 422 RIF 424 >gi|296532547|ref|ZP_06895259.1| peptidyl-prolyl cis-trans isomerase [Roseomonas cervicalis ATCC 49957] gi|296267124|gb|EFH13037.1| peptidyl-prolyl cis-trans isomerase [Roseomonas cervicalis ATCC 49957] Length = 330 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 25/291 (8%), Positives = 70/291 (24%), Gaps = 47/291 (16%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETLKKQ 88 + + ++G + DI ++ L + L + + +LI + Sbjct: 45 GNAQAQRPNPVVARVDGAELRRSDIEAALSQLPGELRAAPPQMLFPLVLDQLIAQQALVN 104 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 G+ D + + + ++ Sbjct: 105 AARAQGLDKDPEVQAAI------------------------------RRAEEEQLQQALL 134 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + +++ E R +L + V Sbjct: 135 RRAIAPALTPEALRARYDREIAGKPGEEEVHARHILTATEAEARAALEEV---------- 184 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKG 266 R + ++ G + + D+ P+F + + P + G Sbjct: 185 RRPGADFAEVARRRSTGPGTQQGGDLGFFKKGDMVPEFAEAAFALQPGQISQAPVRSAFG 244 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 I + ++R + + E+ V+ + A + + Sbjct: 245 WHIIKVEERRTAPV--PSFEESAEELRKAAFEEAVNAAVESTVAAARVERF 293 >gi|237816303|ref|ZP_04595296.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus str. 2308 A] gi|237788370|gb|EEP62585.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus str. 2308 A] Length = 381 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 85/282 (30%), Gaps = 48/282 (17%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETLKKQEIEKSGIT 96 S++ TING+ IT G++ + L Q + A+ LI E EK + Sbjct: 111 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALAALIDIKAMAGEAEKDKL- 169 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 Q ++L +++ + KN + K Sbjct: 170 -----------------------------DQTKEFKDRMEFLRERALHNEYFKNAIVDKI 200 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + ++ +K+ E R +L + + K Sbjct: 201 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEEAEA-----------IIKKLEGGAKFE 249 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICD 274 + + ++ S G Y E + P+F+ T P TQ G I + D Sbjct: 250 DLAKASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLED 309 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R + Q + + E VKKLR I Y Sbjct: 310 RRTKQP--PAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 349 >gi|222833212|gb|EEE71689.1| predicted protein [Populus trichocarpa] Length = 386 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 39/282 (13%), Positives = 91/282 (32%), Gaps = 12/282 (4%) Query: 46 INGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 ++G V +TD DI + +A + + + + +++ + + Sbjct: 101 VDGRVRVTDADIDRYLAEQRSGGADKAPAAVNLGHILISVPENASPAEVAEREARAKQAA 160 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND--------FMLKY 156 + + ++FS D QG G + ++ V F Sbjct: 161 EAARTQGDFLAVVKEFSDVPDGQGGGAMGMRPLDRYPELFTKAVGQTAQGGIVGPFRSGA 220 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 G +++ Q V + R +L I D + + + Sbjct: 221 GFHVLKVLEKSQAGMPSVVTQNHARHILLRIGDQMTEADAAKRLADYKRRVDSGQASF-E 279 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 + +F+ + G + P+F+ +L ++P V++ GV I + ++ Sbjct: 280 SLAREFSQDGSARNGGDLGWASPGQFVPEFEQVLNALQPGQVSDPLVSRFGVHLIQLIER 339 Query: 276 RDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 R + + K+E ++++LR A + Y Sbjct: 340 RQAALTPREQRDMVRNVVRERKLETDYQTWLQELRGRAYVEY 381 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 90/267 (33%), Gaps = 11/267 (4%) Query: 56 ISKRIALLKLQKINGEL-EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 +++ IA Q L + ++ LIVE + QE + +G+ D V+ AR G Sbjct: 4 VAQNIAEQGGQMPPEALLAREVLERLIVEKAQLQEAKDTGLRVDDYAVDQALTNVARQNG 63 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKN 172 L S L +G+ + F++ L Q + + D + + +I +Q+ Sbjct: 64 LDKAGLQSRLRAEGVNEKQFREELRRQITLQRLRERDVDGRVRVTDADIDRYLAEQRSGG 123 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL---EKFASKIHDV 229 + I + + V +R A+++ + L ++F+ Sbjct: 124 ADKAPAAVNLGHILISVPENASPAEVAEREARAKQAAEAARTQGDFLAVVKEFSDVPDGQ 183 Query: 230 SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG----GEIAL 284 G F + + + +Q P+ + G + + +K G Sbjct: 184 GGGAMGMRPLDRYPELFTKAVGQTAQGGIVGPFRSGAGFHVLKVLEKSQAGMPSVVTQNH 243 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ + E A+ + + Sbjct: 244 ARHILLRIGDQMTEADAAKRLADYKRR 270 >gi|110635342|ref|YP_675550.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mesorhizobium sp. BNC1] gi|110286326|gb|ABG64385.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chelativorans sp. BNC1] Length = 351 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 84/288 (29%), Gaps = 48/288 (16%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDI---SKRIALLKLQKINGELEKIAVQELIVETLK 86 + + + A S + TING+ IT+ D+ + + Q + A+ +I L Sbjct: 63 LSAAPAIAQESPVVATINGQQITEADLALAQEELGPQFGQMPEDQRRAAALSAVIDVRLF 122 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 E +K GI ++L +++ Sbjct: 123 ASEAQKEGIDKTDEFQRRT------------------------------EFLRQRALHSA 152 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 + + + + E+ ++ K E R +L ++ K+ Sbjct: 153 YIDANVVKPITDEELNARYEEEVAKIPQQEEVHARHIL-----------VDSEEEAKNII 201 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQ 264 ++ + + G Y E + P+F + + P TQ Sbjct: 202 TQLDEGGDFAEIAKEKSKDGAAANGGDLGYFTEGAMVPEFSKAAFAMEPGAHSEEPVKTQ 261 Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 G I + DKR + Q I E + LR NA Sbjct: 262 FGWHVIKVEDKRMQPP--PALEQVKDQIRSMVIRDKYMETLVSLRENA 307 >gi|110680309|ref|YP_683316.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter denitrificans OCh 114] gi|109456425|gb|ABG32630.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter denitrificans OCh 114] Length = 406 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 94/278 (33%), Gaps = 5/278 (1%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 I++ VL + + +N VIT+ +I +R L L G Sbjct: 1 MIRIKQFCSVLALCAACSLAPPLGAQNLFSPAIQVNDAVITEFEIEQRQQFLTLLNAPGS 60 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + V+ELI E L+ Q + +G+ + + A L ++F + L++ GI Sbjct: 61 SRQAVVEELINERLRAQAVANAGLELSDAALQEGMTEFAGRVNLGVDEFKTVLEENGIAA 120 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 F+ ++ + W D + F + E EI + + L+ ++ P ++ Sbjct: 121 ETFEDFVRVGVSWRDFIAARFGPRLQVSEEEIDQALGSTNGASNIQVLVSEIIIPAPPSR 180 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL-ESDLHPQFQNLL 250 V + + +F++ G+ + + LL Sbjct: 181 AVEVQEVA----EQIAVTTSTEEFSEYARRFSATATRDQGGRLDWQPLSNLPPSLRPLLL 236 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + T P + V + D R+ G A + Sbjct: 237 GLAPGEVTEPLNIPEAVALFQLRDIRETGASTPEFAAI 274 Score = 41.2 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 32/85 (37%), Gaps = 3/85 (3%) Query: 235 QYLLESDLHPQFQNLLKKSQNNTTNPYVT---QKGVEYIAICDKRDLGGEIALKAYLSAQ 291 S++ L K T+ +T + + ++ +C + E + + Sbjct: 321 GSKPPSEIPTDIAVELSKLDPGETSIALTRAEGQTLLFLMMCGRTAAANEDVGRDEAARA 380 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHY 316 +++ ++++LR++A I Sbjct: 381 LRSSRLNAIAESFLEQLRADARIRI 405 >gi|254560598|ref|YP_003067693.1| cell-binding factor 2 [Methylobacterium extorquens DM4] gi|254267876|emb|CAX23742.1| putative cell-binding factor 2 precursor (Major antigen peb4A), cbf2 [Methylobacterium extorquens DM4] Length = 300 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 31/278 (11%), Positives = 66/278 (23%), Gaps = 42/278 (15%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 + +NG+ IT D++ L D Sbjct: 47 ETVVARVNGQAITAADLAIAAEDPALSLPG---------------------------VDE 79 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 V + + + A+ S Y + + D ++ + Sbjct: 80 GAKQNLLVDYMVDLKVGAQAAESAKVGDAPEFKRKLAYFRDKLLLDDYLEREAKKAVTPE 139 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + + E R +L + K Sbjct: 140 AAKALYEQTVKSMKPEEEVRARHIL-----------VESEDEAKKIAARVKGGEDFAKIA 188 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + G + + + F + K + ++P TQ G + + +KR Sbjct: 189 GEVSKDPGSKTEGGDLGWFSQERMVKPFADAAFKMAPGQVSDPVKTQFGWHVLRVEEKRT 248 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + Q K + + + KLR A + Sbjct: 249 KPV--PTFDEMKEQIDQYLTRKAQQDTIVKLREAAKVE 284 >gi|225628141|ref|ZP_03786176.1| peptidyl-prolyl cis-trans isomerase [Brucella ceti str. Cudo] gi|225616966|gb|EEH14013.1| peptidyl-prolyl cis-trans isomerase [Brucella ceti str. Cudo] Length = 381 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 85/282 (30%), Gaps = 48/282 (17%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETLKKQEIEKSGIT 96 S++ TING+ IT G++ + L Q + A+ LI E EK + Sbjct: 111 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALAALIDIKAMAGEAEKDKL- 169 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 Q ++L +++ + KN + K Sbjct: 170 -----------------------------DQTKEFKDRMEFLRERALHNEYFKNAIVDKI 200 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + ++ +K+ E R +L + + K Sbjct: 201 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEEAEA-----------IIKKLEGGAKFE 249 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICD 274 + + ++ S G Y E + P+F+ T P TQ G I + D Sbjct: 250 DLAKASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLED 309 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R + Q + + E VKKLR I Y Sbjct: 310 RRTKQP--PAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 349 >gi|299136355|ref|ZP_07029539.1| SurA domain protein [Acidobacterium sp. MP5ACTX8] gi|298602479|gb|EFI58633.1| SurA domain protein [Acidobacterium sp. MP5ACTX8] Length = 350 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 99/341 (29%), Gaps = 38/341 (11%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 + + ++ + ++S + T+NG I ++ K Sbjct: 1 MPKIFRSSAVLFASTLVLLSGCHKGPQDGVVGTVNGHPILRTEVDKAYNAQLASNPQQTA 60 Query: 72 --------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 L + ELIVE + +Q K + + V+ + + E F + Sbjct: 61 PSADQADSLRLNILHELIVEEIVEQRAAKQNLIATDSEVDAKLAEMKA--PYTEEQFQAR 118 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 L + + ++ + + + K + ++ K+ + Sbjct: 119 LKTANLTLDELRRDIRRNLTQTKLFNKEIDSKITVTDGDVNNYFNAHKDSFNLIENRYHL 178 Query: 184 LFSIPDNKLQNQ------------GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVS 230 + N+ Q +K+I+ + F+ + Sbjct: 179 AQILVTNQPAQQSSNLQNSKATTDDEARKKIQALKNRLDTGDDFGTIASNFSENQDTAPN 238 Query: 231 IGKAQYLLESDL---HPQFQNLLKKSQNNTTNPYVT-------QKGVEYIAICDKRDLG- 279 G ++ ES + + ++K T+ G + K G Sbjct: 239 GGDVGFVPESQMKADPTAYAAIMKLKAGQITDILPVLDGTTHKVAGYSIYKLISKEPAGQ 298 Query: 280 ---GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + ++ + Q ++ + +A Y++ LR A + Y Sbjct: 299 RDLNDPRVQQNIRQQLHESRSQLLKASYLEMLRDQAKVENY 339 >gi|85859367|ref|YP_461569.1| peptidylprolyl isomerase [Syntrophus aciditrophicus SB] gi|85722458|gb|ABC77401.1| peptidylprolyl isomerase [Syntrophus aciditrophicus SB] Length = 364 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 104/351 (29%), Gaps = 46/351 (13%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR--------------------------- 41 L F L L+ F + +S+ Sbjct: 10 LKGFFSTLFVLICLLAFLLTACQKNDQQGTASKEETAPTASVPQTATPAEGAEKALGPGD 69 Query: 42 IRTTINGEVITDGDISKRIAL-----------LKLQKINGELEKIAVQELIVETLKKQEI 90 ++G +T G + + KL ++ ++K + + +V+TL E+ Sbjct: 70 PVIEVDGVKMTKGQLDTEVNRKLESIRKRVPAEKLPQVKTNIQKRLIDDFVVKTLLNNEV 129 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 + IT VN + + + + L K + ++ + + ++ + Sbjct: 130 NRLKITATEQEVNEAVEKLKSSLPANV-SLENLLKKNQMTREKMREEIRLGIQINKLMVS 188 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 E EI + +K ++ + I + + ++ AE R Sbjct: 189 RTKNLPKPTEKEITSFYKKNQDRFKLPEAVHVRHILIARAPDDGEKVIAEKKAKAEGLRK 248 Query: 211 R---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKG 266 + + + + G + + F++ + +N T+ G Sbjct: 249 KILAGADFAELAKSNSDCPSKSAGGDLGIVSRGQMVKPFEDAIFSLKKNQIGPVVQTEYG 308 Query: 267 VEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + D R + K +S+ K ++ + V L+ A I Sbjct: 309 FHVVQVLDVRQPKTVALDERTKGMISSFLLQQKQQEAFRKMVASLKEKANI 359 >gi|237729350|ref|ZP_04559831.1| peptidyl-prolyl cis-trans isomerase SurA [Citrobacter sp. 30_2] gi|226909079|gb|EEH94997.1| peptidyl-prolyl cis-trans isomerase SurA [Citrobacter sp. 30_2] Length = 428 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 104/311 (33%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L + G+ + Sbjct: 67 RHQILERLIMDQILLQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAQDGLSYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + +V N+ + L E+ A Q++ N + IP + Sbjct: 127 TYRSQIRKEMTISEVRNNEVRRRVTILPQEVDALAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + +++ + G+ + +L F Sbjct: 187 PTSDQVNAAESQARSVVDEARNGSDFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R + ++ + +P ++ Sbjct: 247 LSTAKKGDIIGPIRSGVGFHILKVNDMRGQSQSISVTEVHARHILLKPSPIMTDQQARLK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 87/288 (30%), Gaps = 25/288 (8%) Query: 47 NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 N EV I ++ + Q L + E S + + Sbjct: 143 NNEVRRRVTILPQEVDALAQQVGNQNDASTELN-----LSHILIPLPENPTSDQVNAAES 197 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 V ARN + ++ Q + IQ + + Sbjct: 198 QARSVVDEARNGSDFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIIG 257 Query: 152 -FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 G +++ + + ++I+V E R +L +Q K + A + + Sbjct: 258 PIRSGVGFHILKVNDMRGQSQSISVTEVHARHILLKPSPIMT-DQQARLKLEQIAADIKS 316 Query: 211 RLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVE 268 ++F+ G + P F++ K ++ + P + G Sbjct: 317 GKTTFAAAAKEFSQDPGSANQGGDLGWAAADIFDPAFRDALTKLNKGQMSAPVHSSFGWH 376 Query: 269 YIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + D R++ + A K K + A ++++ R++A + Sbjct: 377 LIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVK 424 >gi|163735798|ref|ZP_02143227.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter litoralis Och 149] gi|161390884|gb|EDQ15224.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter litoralis Och 149] Length = 415 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 99/278 (35%), Gaps = 6/278 (2%) Query: 13 IKLLTTYFVLIIFCIVPIVSYK-SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 + + + +++ C + +N VIT+ +I +R L L G Sbjct: 10 MIRIKEFCTVLMVCATCSFAVPLGAQSLFSPVIEVNDGVITEFEIEQRQQFLILLNAPGS 69 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + ++ELI E L+ Q + +G+ + ++ A L ++F + L++ GI Sbjct: 70 SRQAVIEELINERLRAQAVANAGLELSDAAMQDGMIEFAGRVNLGVDEFKTVLEENGIAA 129 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 F+ ++ + W D + F + E EI + + L+ ++ P + Sbjct: 130 TTFEDFVRVGVSWRDFIAARFGPRLQVSEEEIDQALGSTNGASNIQVLVSEIIIPAPPAR 189 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL-ESDLHPQFQNLL 250 V + + + + + +F++ G+ ++ + LL Sbjct: 190 ALEVQEVA----EQIATTTSVEEFSDYARRFSATATRDQGGRLEWQALSNLPPSLRPLLL 245 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + T P + V + D R+ G A + Sbjct: 246 GLAPGEVTEPLNIPEAVALFQLRDIRETGASTPEYAAI 283 Score = 39.7 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 31/83 (37%), Gaps = 3/83 (3%) Query: 235 QYLLESDLHPQFQNLLKKSQNNTTNPYVT---QKGVEYIAICDKRDLGGEIALKAYLSAQ 291 S++ L K T+ +T + + ++ +C + E + + Sbjct: 330 GSKPPSEIPTDIALELSKLDPGETSIALTRSEGQTLLFLMMCGRTAAANEDVGRDEAANA 389 Query: 292 NTPTKIEKHEAEYVKKLRSNAII 314 ++ ++++LR++A I Sbjct: 390 LRGGRLNAIAESFLEQLRADARI 412 >gi|51894079|ref|YP_076770.1| putative post-translocation molecular chaperone [Symbiobacterium thermophilum IAM 14863] gi|51857768|dbj|BAD41926.1| putative post-translocation molecular chaperone [Symbiobacterium thermophilum IAM 14863] Length = 297 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 42/318 (13%), Positives = 93/318 (29%), Gaps = 31/318 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR--IRTTINGEVITDGDISK 58 M + + + ++ T V + S + + + T+NGE IT ++ + Sbjct: 1 MLANGNNRATIALAVVATLVVAGLGGYFVGSSLQRPGTGNDPAVVATVNGEQITRDEVHQ 60 Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 ++ V ++I+ L QE ++G+T V G Sbjct: 61 KLMTY--------YGAAVVDDMILTRLVDQEAARAGVTVTDAEVEEEVEATKAAYGGDL- 111 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 FS L + G+ + F+ L + V++ L+ + + ++ Sbjct: 112 YFSWALSQYGLSEAQFRDMLRRDMVATAVLRQQLQPDDATLKAYFDEMQSAEQTRKIKVR 171 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYL 237 I +++ + + + + G + Sbjct: 172 HILV--------------DTEEKANEIKARLDAGADFAQLAQAESKDTASAAKGGDLGLI 217 Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 + D +F+ + + P + G I K + Q K Sbjct: 218 GKGDTVSEFEAAAFALNDGEISAPVQSTYGWHIIQAY----QLHFEQEKQTILEQYLNEK 273 Query: 297 IEKHEAEYVKKLRSNAII 314 + + +LR NA I Sbjct: 274 VSARLGTWYSELRENAQI 291 >gi|296116659|ref|ZP_06835269.1| peptidyl-prolyl cis-trans isomerase [Gluconacetobacter hansenii ATCC 23769] gi|295976871|gb|EFG83639.1| peptidyl-prolyl cis-trans isomerase [Gluconacetobacter hansenii ATCC 23769] Length = 461 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 80/265 (30%), Gaps = 9/265 (3%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-------ELEKIAVQELIVETLK 86 I +NG V+T D+ R L L L V++LI E L+ Sbjct: 58 TGPQTEDSIVAIVNGSVLTKRDVDTRGRLFALSSGLDVSKDVMVRLRPQIVRQLIDERLR 117 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 + + + I + + G+ + L + I + +Q W Sbjct: 118 MEAMLERHINVPVAQIAAAISGIEQRNGMPENSLRNRLAQDSISLTTLIDQIRVQVGWSQ 177 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V++ + + EI +K + + + +F ++ K + Sbjct: 178 VLRMETGSRGRITATEIQQRTDALKREDGKPQYMISEIFVPVEDPHH-PETELKFTETII 236 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQK 265 + +F+ + G + E L + K +NP Sbjct: 237 QELREGAPFPIVAAQFSQSQSALEGGLLGWTQEDSLDPEVVEVARKMPDGAISNPIRVAG 296 Query: 266 GVEYIAICDKRDLGGEIALKAYLSA 290 G + ++R +G E+A + Sbjct: 297 GYVIATVNNRRTVGHEMATILNIHQ 321 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 83/276 (30%), Gaps = 21/276 (7%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 IT +I +R LK + + +I E E +Q Sbjct: 189 ITATEIQQRTDALKREDGKPQY-------MISEIFVPVE--DPHHPETELKFTETIIQEL 239 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK--NDFMLKYGNLEMEIPANKQ 168 R + F Q + + S+ P+VV+ + + + Sbjct: 240 REGAPFPIVAAQFSQSQSALEGGLLGWTQEDSLDPEVVEVARKMPDGAISNPIRVAGGYV 299 Query: 169 KMKNITVREY---------LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 R + + L Q+ QK+ K C+++ Sbjct: 300 IATVNNRRTVGHEMATILNIHQAFLPFDQPLNPQDPSDQQKQTLQQASDLAGKVKSCDEM 359 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 E K + L L+PQ + + ++P V+ G+ I +C + + Sbjct: 360 ETLNKKFGEKHPTDPGELRVDRLNPQMREVLEHLQPGQASHPLVSMDGIALIMVCKREER 419 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ Q ++E+ + + L A+I Sbjct: 420 NVALQTPSEIADQLLNERVEQTSRQLDRDLHRRAVI 455 >gi|326405098|ref|YP_004285180.1| putative peptidyl-prolyl cis-trans isomerase SurA [Acidiphilium multivorum AIU301] gi|325051960|dbj|BAJ82298.1| putative peptidyl-prolyl cis-trans isomerase SurA [Acidiphilium multivorum AIU301] Length = 427 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 90/290 (31%), Gaps = 12/290 (4%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--- 65 + F+ ++ + + + A + I +NG VIT+ D++ R L L Sbjct: 1 MKSFVSY---AALIGLAAGLLAPGAPARAQTVSIAAVVNGTVITNADVAARTRLFALSAG 57 Query: 66 ----QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 L+ +ELI + L+ Q IE++ + + + L Sbjct: 58 LPTTSATLQRLKPQITRELIDQALQLQAIERNKVVVPEAKIAAALKRVNEANHLPPGSLQ 117 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 L GI + Q W DV++ +I A + MK + Sbjct: 118 KKLAAAGIPLSTLVSQFRTQIGWTDVLRKKLGPDLRPTAADIAAEEAAMKKEIGKTQYHI 177 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 +F +N + ++ +F+ ++ G ++ Sbjct: 178 AEIFIPVENP-ADVANARRFADVVIRQLRAGAPFPVVAAQFSQSQSALTGGDRGWVQPDL 236 Query: 242 LHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 L P + +++K ++P G E + R G + Sbjct: 237 LDPAVRRIVEKMPVGAISDPVRVAGGFEIVNQLGIRQFGVGQRTTLSIRQ 286 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 8/63 (12%), Positives = 21/63 (33%) Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + P V+ G+ + +C + + K + ++ + L +A I Sbjct: 362 GQPSEPLVSSSGIAIVMVCKRETSKIGLPGKKAIEEMLINRRVSLEAQRLMDTLHRDAEI 421 Query: 315 HYY 317 + Sbjct: 422 RIF 424 >gi|220924508|ref|YP_002499810.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium nodulans ORS 2060] gi|219949115|gb|ACL59507.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium nodulans ORS 2060] Length = 285 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 32/286 (11%), Positives = 67/286 (23%), Gaps = 42/286 (14%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91 + + +NG +T GD++ L Sbjct: 26 NQAPSPAPDTVVARVNGAPVTAGDLAVAADDPALSLPG---------------------- 63 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 V + + L A+ + + Y + + + ++ + Sbjct: 64 -----VSDEQKKGLLVDYMVDLKLGAQAAEKAKVGESPDFSRKLAYFRDKLLLDEYLERE 118 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 ++ E R +L + K Sbjct: 119 AKKAVTPEAARSLYDETVKTLKPEEEVHARHIL-----------VESEAEAKKIAGRIKG 167 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEY 269 + + G + + + P F + K ++P TQ G Sbjct: 168 GEDFAKVAAETSKDPGSKAEGGDLGWFTKERMVPAFAEAAFKLDAGKVSDPVKTQFGWHV 227 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + +KR + Q K + + + KLR A I Sbjct: 228 IKVEEKRTKPV--PSFDEMKEQIDTYLTRKTQQDIITKLREQAKIE 271 >gi|153008357|ref|YP_001369572.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ochrobactrum anthropi ATCC 49188] gi|151560245|gb|ABS13743.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ochrobactrum anthropi ATCC 49188] Length = 326 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 85/282 (30%), Gaps = 48/282 (17%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETLKKQEIEKSGIT 96 S++ T+NG IT G++ + L Q + A+ LI E EK + Sbjct: 56 SKVLATVNGNDITVGEVDQAAGDLDPQFSRLPAEQRRLAALAALIDIKAMAGEAEKEKLD 115 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 N ++L +++ + K+ + K Sbjct: 116 QSQEFKNR------------------------------MEFLRERALHNEYFKDAVVDKI 145 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + ++ +K+ E R +L + + K Sbjct: 146 SDDDVRARYDKEIAAMPPQVEVRARHILVKTKEEAEA-----------IIKKLEGGAKFE 194 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICD 274 + ++ ++ + G Y E + P+F+ T P TQ G I + D Sbjct: 195 DLAKESSTDGTAANGGDLGYFAEGQMVPEFEKAAFALKPGEYTKEPVQTQFGFHVIQLED 254 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R + Q + + E VKKLR I Y Sbjct: 255 RRTKQP--PAFDQVKDQIRSIIMRERYVETVKKLRDGMKIDY 294 >gi|146310266|ref|YP_001175340.1| peptidyl-prolyl cis-trans isomerase SurA [Enterobacter sp. 638] gi|145317142|gb|ABP59289.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterobacter sp. 638] Length = 428 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 106/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ +V S+ + + ++ +N V+ + D++ + +KL L Sbjct: 7 LLLGIAMVANTSFAAPQVVDKVAAVVNNGVVLESDVNGMMQSVKLNSGQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ ++ ++ + S L GI Sbjct: 67 RHQILERLIMDQIVLQMGQKMGVKVTDEQLDQAIANISKQNNMTLDQMRSRLAYDGISYA 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L E+ +++ N + +P + Sbjct: 127 TYRNQIRKEMLISEVRNNEVRRRVTILPQEVDQLAKQVGNQNDASTELNLSHILVPLPEN 186 Query: 193 QNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 + E +++ + G+ + +L F Q Sbjct: 187 PTSDQAAEAESQARSIVEQARNGGDFGKLAITYSADQQALKGGQMGWGRIQELPSIFGQA 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 L + + P + G + + D+R ++ ++ + +P + Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDRRGQSQNISVTEVHARHILLKPSPIMTDDQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 MEQI--AADIK 315 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 94/288 (32%), Gaps = 25/288 (8%) Query: 47 NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 N EV I ++ + + Q L + E S ++ + Sbjct: 143 NNEVRRRVTILPQEVDQLAKQVGNQNDASTELN-----LSHILVPLPENPTSDQAAEAES 197 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 V+ ARN G + ++ Q + IQ + + Sbjct: 198 QARSIVEQARNGGDFGKLAITYSADQQALKGGQMGWGRIQELPSIFGQALSTAKKGDIVG 257 Query: 152 -FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 G +++ + + +NI+V E R +L +Q V K + A + + Sbjct: 258 PIRSGVGFHILKVNDRRGQSQNISVTEVHARHILLKPSPIMTDDQARV-KMEQIAADIKS 316 Query: 211 RLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVE 268 N ++F+ G + P F++ +K ++ + P + G Sbjct: 317 GKTSFANAAKEFSQDPGSANQGGDLGWAAADIYDPAFRDALMKLNKGQMSAPVHSTFGWH 376 Query: 269 YIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + D R++ + A K K + A ++++ R++A + Sbjct: 377 LIELLDTRNVDKTDAAQKDRAYRMLFNRKFSEEAATWMQEQRASAYVK 424 >gi|311280964|ref|YP_003943195.1| SurA domain-containing protein [Enterobacter cloacae SCF1] gi|308750159|gb|ADO49911.1| SurA domain protein [Enterobacter cloacae SCF1] Length = 428 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 110/311 (35%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ +V S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMVANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDNTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKVSDEQLDQAIASIAKQNNMTMDQMRSRLANDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190 ++ + + I +V N+ + L E+ A + +N E + +L +P+N Sbjct: 127 TYRSQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQMGNQNDASTELNLSHILIPLPEN 186 Query: 191 KLQNQG-FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 +Q + + + E +++ + G+ + +L F Sbjct: 187 PTSDQVSEAEAQARSVVEQARGGADFGKLAITYSADQQALKGGQMGWGRIQELPSIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G I + D R + ++ + +P + Sbjct: 247 LSTAKKGDIIGPIRSGVGFHVIKVNDLRGQSQTISVTEVHARHILLKPSPIMSDDQARAK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQV--AADIK 315 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 90/287 (31%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ Sbjct: 143 NNEVRRRITV--LPQEVDALAKQMGNQNDASTELN-LSHILIPLPENPTSDQVSEAEAQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V+ AR + ++ Q + IQ + + Sbjct: 200 RSVVEQARGGADFGKLAITYSADQQALKGGQMGWGRIQELPSIFAQALSTAKKGDIIGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + + I+V E R +L +Q K + A + + Sbjct: 260 RSGVGFHVIKVNDLRGQSQTISVTEVHARHILLKPSPIMSDDQA-RAKLEQVAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 ++ + G + P F++ + K S+ + P + G I Sbjct: 319 TTFEKAAKELSQDPGSANQGGDLGWATPDIYDPSFRDAVMKLSKGQVSAPVHSSFGWHLI 378 Query: 271 AICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 QLLDTRNVDRTDAAQKDKAYRMLMNRKFSEEAATWMQEQRASAYVKI 425 >gi|114331519|ref|YP_747741.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas eutropha C91] gi|114308533|gb|ABI59776.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas eutropha C91] Length = 264 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 89/305 (29%), Gaps = 46/305 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--EL 72 LT + + + + + + A +NG I + I Q E+ Sbjct: 2 RLTKFLCVPLAVLGFVCTTPLSAQGGGTVAKVNGIAIPQSRLDLVIKAATAQGQPDSAEM 61 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + LI E + QE K G+ + + V Sbjct: 62 RNALRENLITEEVLTQEAIKKGLDRNPDVVTQI--------------------------- 94 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 LA Q I + DFM + E+ + +K+ + + + + Sbjct: 95 ----DLARQGILIRAYQADFMRNNPVSDDELRKEYESVKSQMGDKEYKARHILVETEQEA 150 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 ++ K+ E+ E+ + G+ + + F + L K Sbjct: 151 KDLVASLKKGGVFEKL---------AGERSIDTGSKSNGGELGWSSAAVYVKPFSDALTK 201 Query: 253 SQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + T+ P T G I + D R + +++ A V+ LR Sbjct: 202 LKKGETTSQPVQTPFGWHVIRLDDVRTAVP--PSFDEVKQNMQQRVLQRKFAAVVESLRK 259 Query: 311 NAIIH 315 NA + Sbjct: 260 NAKVE 264 >gi|291616238|ref|YP_003518980.1| SurA [Pantoea ananatis LMG 20103] gi|291151268|gb|ADD75852.1| SurA [Pantoea ananatis LMG 20103] gi|327392689|dbj|BAK10111.1| chaperone SurA precursor [Pantoea ananatis AJ13355] Length = 431 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 36/310 (11%), Positives = 104/310 (33%), Gaps = 18/310 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ + ++ + + ++ +N V+ + D+ ++ +K Q L Sbjct: 7 LILGVALSANTAFAAPQVVDKVAAVVNNGVVLESDVDSMMSTVKSQAKQAGQQLPDDKTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ I++ + Q +K+G+ ++ A +S + S L G+ N Sbjct: 67 RHQILEREIMDAIILQLGDKAGLQITDQQLDQAIQNIAAQNRMSVDQLRSRLAYDGMNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L E+ Q++ + + +P + Sbjct: 127 TYRAQIRKEMLISEVRNNEVRRRVTILPQEVDTLAQQVGAQNTQGTEMNISHILLPLPEN 186 Query: 193 QNQGFV---QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 Q V +K K +++ + G + +L F Sbjct: 187 PTQQQVDDQEKLAKQLITELKGGADFGKLAVTYSADSQALKGGNMGWAKIEELPTLFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P + Sbjct: 247 LTTAKKGDIVGPIRSGVGFHILKVNDLRGESKNVSVTEVHARHILLKPSPIMTDDQARAK 306 Query: 305 VKKLRSNAII 314 ++++ A I Sbjct: 307 LEQI--AADI 314 Score = 84.7 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 38/289 (13%), Positives = 83/289 (28%), Gaps = 25/289 (8%) Query: 47 NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 N EV I ++ + Q G I+ L E D Sbjct: 143 NNEVRRRVTILPQEVDTLAQQVGAQNTQGTEMNISHILL-----PLPENPTQQQVDDQEK 197 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + + + + ++ + I+ + + Sbjct: 198 LAKQLITELKGGADFGKLAVTYSADSQALKGGNMGWAKIEELPTLFAQALTTAKKGDIVG 257 Query: 152 -FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 G +++ + + KN++V E R +L +Q K + A + R Sbjct: 258 PIRSGVGFHILKVNDLRGESKNVSVTEVHARHILLKPSPIMTDDQA-RAKLEQIAADIRS 316 Query: 211 RLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVE 268 ++F+ G + P F++ L + + T+ P + G Sbjct: 317 GKTTFAAAAKQFSDDPGSANQGGDLGWTSPEVFDPAFRDALLRLKKGETSQPVHSSFGWH 376 Query: 269 YIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R+ A + Sbjct: 377 LIQLLDTRQVDKTDAAQKERAYRMLFNRKFAEEAQTWMQEQRAGAYVKI 425 >gi|218547503|ref|YP_002381294.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia fergusonii ATCC 35469] gi|218355044|emb|CAQ87650.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia fergusonii ATCC 35469] gi|324112544|gb|EGC06521.1| ppic-type ppiase domain-containing protein [Escherichia fergusonii B253] Length = 428 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--------KRIALLKLQKINGEL 72 +L+ ++ S+ + + ++ +N V+ + D++ + + L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVNGLLQSVKLNAAQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQILERLIMDQILLQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRISILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + V + A + +++ + G+ + +L F Sbjct: 187 PSSDQVNEAESQARAIVDQARNGADFGKLAISYSADQQALKGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDVVGPIRSGVGFHILKVNDLRGGSQNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 85/273 (31%), Gaps = 16/273 (5%) Query: 58 KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 + + L Q N + L + E S ++ + V ARN Sbjct: 155 QEVESLAQQVGNQNDASTELN-LSHILIPLPENPSSDQVNEAESQARAIVDQARNGADFG 213 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------FMLKYGNLEMEIPAN 166 + S+ Q + IQ + + G +++ Sbjct: 214 KLAISYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDVVGPIRSGVGFHILKVNDL 273 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + +NI+V E R +L Q V K + A + + ++F+ Sbjct: 274 RGGSQNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGKTTFAAAAKEFSQDP 332 Query: 227 -HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIA 283 G + P F++ + ++ + P + G I + D R++ + A Sbjct: 333 GSANQGGDLGWATADIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAA 392 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K K + A ++++ R++A + Sbjct: 393 QKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|322713110|gb|EFZ04681.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 428 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 113/311 (36%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ + Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190 ++ + + I +V N+ + L E+ A + +N E +R +L ++P+N Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDASTELNLRHILIALPEN 186 Query: 191 KLQNQGFVQKRIKDAE-ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 Q +R ++ E +++ + G+ + +L F Sbjct: 187 PTSEQVNDAQRQAESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R + ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMNDQQARLK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEEI--AADIK 315 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 89/287 (31%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q + L + E S D+ Sbjct: 143 NNEVRRRITV--LPQEVDALAKQIGTQNDASTELN-LRHILIALPENPTSEQVNDAQRQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V+ ARN + ++ Q + IQ + + Sbjct: 200 ESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + ++I+V E R +L +Q K + A + + Sbjct: 260 RSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMN-DQQARLKLEEIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270 ++++ G + P F++ L K + P + G I Sbjct: 319 TTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R + + A K K + A ++++ R++A + Sbjct: 379 ELLDTRKVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKI 425 >gi|90420209|ref|ZP_01228117.1| peptidyl-prolyl cis-trans isomerase [Aurantimonas manganoxydans SI85-9A1] gi|90335543|gb|EAS49293.1| peptidyl-prolyl cis-trans isomerase [Aurantimonas manganoxydans SI85-9A1] Length = 320 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 83/314 (26%), Gaps = 50/314 (15%) Query: 10 SDFIKLLTTY--FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ- 66 F + T + +L + + A + + E IT+ D+ A + Q Sbjct: 22 RTFFAMNTAFRSTLLAGALVFAAFGTAAHAADEDVVARVGSEEITERDLKAAAAEVGEQF 81 Query: 67 --KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + + + LI + ++ E + D Sbjct: 82 ARLPADQRKLAVLSALIDIKVLARQAEAEALQDDPEVAAQI------------------- 122 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 +L +++ + + E++ K+ E R +L Sbjct: 123 -----------DFLRERTLHNAYFARNGVANITEEELKARFEKEVAAMPATEEVHARHIL 171 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + ++ ++ G + + P Sbjct: 172 LKTKEEAEA-----------VIAKLDGGADFVELAKESSTGPSGPEGGDLGFFSAGQMVP 220 Query: 245 QFQNLLKKSQNNTT--NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 +F+ + + T P TQ G I + +KR+ + Q + + Sbjct: 221 EFEKVAFTMEPGTYTKEPVQTQFGWHVIKVEEKREAP--KPEFDAVKDQVRQVVLREKYM 278 Query: 303 EYVKKLRSNAIIHY 316 V+K R + + Y Sbjct: 279 GLVQKARDDLPVEY 292 >gi|255530403|ref|YP_003090775.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pedobacter heparinus DSM 2366] gi|255343387|gb|ACU02713.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pedobacter heparinus DSM 2366] Length = 455 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 29/290 (10%), Positives = 86/290 (29%), Gaps = 13/290 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--L 72 + + + F + + + ++ + +I D++++ A + + Sbjct: 1 MKKIFLIASGFICLFLNAQAQKKNIDKVVAVLGSNIILLSDLNQQYAQFLNSGNTDDPKV 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + +Q+++ + L KQ+ E + D V+ + R A Sbjct: 61 KCYILQQMLAQKLLKQQAEIDSVMVDDGQVDEEVEKRMRYQIQRAGGQERLEQFLNRSVL 120 Query: 133 HFKQYLAIQSIWPDV---VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 +K + + ++ +E+ + ++ + + I Sbjct: 121 QYKDEIRPDIKEQLISNKMQAKITQDVSITPLEVKKYFDGYQKDSLPDIPTEFEIGEIVM 180 Query: 190 NKLQNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQ 245 + QK + RLR + ++ G + + + + Sbjct: 181 YPKLTKAEKQKYYDKIDALRLRVKSGEDFAFLAKSYSEDPGSAADGGDLGFFDRTRMVKE 240 Query: 246 FQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 F K + + T+ G + + ++R GE ++ + Sbjct: 241 FTAWAFKLKPGEMSPVFETEHGFHILQVVERR---GEQVQARHILIRPQN 287 Score = 42.4 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 27/288 (9%), Positives = 68/288 (23%), Gaps = 19/288 (6%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 IT ++ K + + + + E+++ + ++ Sbjct: 146 DVSITPLEVKKYFDGYQKDSLPDIPTEFEIGEIVMYPKLTKAEKQKYYDKIDALRLRVKS 205 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + G F + ++ K E E + Sbjct: 206 GEDFAFLAKSYSEDPGSAADGGDLGFFDRTRMVKEFTAWAFKLKPGEMSPVFETEHGFHI 265 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KI 226 ++ + R +L + + + + ++ K Sbjct: 266 LQVVERRGEQVQARHILIRPQNTPASLDRVKLQADTIYKNLVGKKIPFSTAASLYSDNKE 325 Query: 227 HDVSIGKA----------QYLLESDL-HPQFQNLLKKSQNNTTNP-----YVTQKGVEYI 270 + G ++ L F + + P + G + + Sbjct: 326 SQYNGGMLLYADNVTARTTFIPADKLDPKVFLIVDTMKVGEISAPTLFTDQSGKDGYKIL 385 Query: 271 AICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K G A + K +K +E+ +K R N I Sbjct: 386 YLKSKIPPHKGNLDQDYAKFKEKAQQEKTDKVLSEWFEKRRENTYIRI 433 >gi|161504788|ref|YP_001571900.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866135|gb|ABX22758.1| hypothetical protein SARI_02912 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 428 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ + Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ A +++ + I + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDANTELNLSHILIALPEN 186 Query: 193 QNQGFVQKRIKDAE---ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 G V + AE E +++ + G+ + +L F Sbjct: 187 PTSGQVNDAQRQAESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGQSPNISVTEVHARHILLKPSPIMTDQQARLK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEEI--AADIK 315 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 89/287 (31%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q + L + E SG D+ Sbjct: 143 NNEVRRRITV--LPQEVDALAKQIGTQNDANTELN-LSHILIALPENPTSGQVNDAQRQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V+ ARN + ++ Q + IQ + + Sbjct: 200 ESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + NI+V E R +L +Q K + A + + Sbjct: 260 RSGVGFHILKVNDLRGQSPNISVTEVHARHILLKPSPIMT-DQQARLKLEEIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270 ++++ G + P F++ L K + P + G I Sbjct: 319 TTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R + + A K K + A ++++ R++A + Sbjct: 379 ELLDTRKVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKI 425 >gi|291326505|ref|ZP_06124797.2| peptidylprolyl cis-trans isomerase SurA [Providencia rettgeri DSM 1131] gi|291313964|gb|EFE54417.1| peptidylprolyl cis-trans isomerase SurA [Providencia rettgeri DSM 1131] Length = 460 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 40/321 (12%), Positives = 107/321 (33%), Gaps = 17/321 (5%) Query: 8 SLSDFIKLLTTYFVLII-FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66 ++ + ++ + LI+ + + ++ +N V+ + D+ I +KL Sbjct: 14 KVNIYRTIMKNWRTLILGLMFASSTALAAPQQMDKVAAVVNNGVVLESDVQNMINTVKLN 73 Query: 67 KIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 N L ++ L+++ + Q + I V+ AR GL+ + Sbjct: 74 AQNARQQVPDDQTLRHQILERLVMDNIILQMASQMQINIPDEAVDATITDIARQNGLTLQ 133 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 L GI N ++ + + + +V N+ + L E+ + ++M + E Sbjct: 134 QMQQRLTADGINMNQYRSEIRKEMLIAEVRNNEVRRRVTILPQEVDSLAEQMSSQANYEM 193 Query: 179 LIRTVLFSIPDNKLQNQGF---VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 + IP + Q + + + +++ + G Sbjct: 194 GVNLSHILIPLAENPTQEQLKTAEALVDKILAELKKGGDFGKLAIAYSADPQALKGGNMG 253 Query: 236 YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK----RDLGGEIALKAYLSA 290 + +L F + L + + P + G + + D + + ++ Sbjct: 254 WSRLQELPVVFAEQLKNAKKGDVVGPIRSGVGYHILRVNDVSGGSQPISVTEVKARHILI 313 Query: 291 QNTPTKIEKHEAEYVKKLRSN 311 +++P + + + K+ Sbjct: 314 KSSPIMDDAQARQKLTKIAQE 334 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 51/138 (36%), Gaps = 3/138 (2%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 + + + QK K A+E R + ++ + + G+ + + Sbjct: 309 RHILIKSSPIMDDAQARQKLTKIAQEIRSGKISFEDAAKENSEDPGSALKGGELGWNMPD 368 Query: 241 DLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE 298 P F++ ++ ++ + P + G I + D R++ + A K K Sbjct: 369 IYDPAFRDALMRLNKGELSQPVQSNFGWHLIQLEDTRNVDKTDAAQKDQAYRLLFNRKFN 428 Query: 299 KHEAEYVKKLRSNAIIHY 316 + ++++ R++A + Sbjct: 429 EEAQSWMQEQRASAYVKI 446 >gi|86359353|ref|YP_471245.1| peptidyl prolyl cis-trans isomerase D signal peptide protein [Rhizobium etli CFN 42] gi|86283455|gb|ABC92518.1| peptidyl prolyl cis-trans isomerase D signal peptide protein [Rhizobium etli CFN 42] Length = 293 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 80/301 (26%), Gaps = 49/301 (16%) Query: 22 LIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRIALL---KLQKINGELEKIAV 77 + V++++ A + + I ++ +A L Q + + + A+ Sbjct: 7 FAVLAFATFVAFQAPAHAEDAVVAKVGNLEIHQSELDLAVANLDPQLAQLPDDQKKVAAL 66 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 I L A ++ +Q QY Sbjct: 67 SAAIDVKLL------------------------------AAGATTEKLEQTDEFKKRMQY 96 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 L + + K + E++ +K+ E R +L D Sbjct: 97 LTDRELHNAYFKKHVVDTVTPDEIKARYDKEVAALPKQEEVHARHILVKTEDEAKDIIKQ 156 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256 + ++ ++ + G Y + +F++ + Sbjct: 157 LDA-----------GKDFAELAKEKSTDPNKSEGGDLGYFSRGRMVKEFEDAAFALEKGA 205 Query: 257 TTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + DKRD + Q + + + +S+A I Sbjct: 206 YSKTPVKTDFGYHVIKVEDKRDAPP--PPFDQVQDQVRQLVMRDKYLALLNQAKSSAKIE 263 Query: 316 Y 316 Sbjct: 264 I 264 >gi|126734461|ref|ZP_01750208.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseobacter sp. CCS2] gi|126717327|gb|EBA14191.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseobacter sp. CCS2] Length = 280 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 79/307 (25%), Gaps = 51/307 (16%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---SKRIALLKLQKI 68 +K +T + ++ ++ + + T+ IT G+I ++ Q Sbjct: 1 MLKHVTFLGATAMATVLSTGAFAQDVTAETVVATVGDTEITMGEIIIARTQLPPQYAQLP 60 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 L V +LI + L E + + N Sbjct: 61 ADALFNGLVDQLIQQQLLADEADGVSAQIEYTLSNE------------------------ 96 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 I DV+ + +++ + + ++E+ +L Sbjct: 97 ----------RRALIAADVITSIADNAVTEADVQTAYDARFENAEEIQEFNAAHLL---- 142 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 ++ A+ + ++ + G + + P F+ Sbjct: 143 -------VETEEEAIAAKARIDEGAAFADVARDVSTGPTGPNGGNLGWFGPGAMVPTFEE 195 Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + P+ TQ G + + R L Q E + + Sbjct: 196 AVMGLDVGGVSEPFETQFGWHVATLLETRVQP--RPTIDDLRPQIAQELQEAAITARLDE 253 Query: 308 LRSNAII 314 L I Sbjct: 254 LAEAQTI 260 >gi|189218309|ref|YP_001938951.1| Parvulin-like peptidyl-prolyl isomerase [Methylacidiphilum infernorum V4] gi|189185167|gb|ACD82352.1| Parvulin-like peptidyl-prolyl isomerase [Methylacidiphilum infernorum V4] Length = 332 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 88/310 (28%), Gaps = 26/310 (8%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALL-----------KLQKINGELEKIAVQELIV 82 S I +N +VIT + K++ +L E A++ LI Sbjct: 23 SQTQGSDGIAAIVNDKVITFSQVRKQVEPNEAVLRETYQGSELVNRIKEARLSALRALID 82 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHAR-NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 L Q+ + + + R F L GI + +KQ L Q Sbjct: 83 RELIIQDFKSKKYAIPDSFIESRVRDIIRTQFDGDRIAFIRTLQASGISEEQYKQQLLEQ 142 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS-----------IPDN 190 I + + +I Q ++ + + Sbjct: 143 IIVQAMRMKNVSEPVIISPYQIEKYYQDHIAQFFEPPQVKLRIIFLQKTSFKDKRATVNG 202 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNL 249 +L+ ++ + ++ + G ++ + L + Sbjct: 203 QLEEYDPARETATELLSKLQLGADFAELARSYSEGPKRMDGGDLGWVTKDSLRPEIAEAA 262 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKK 307 T+ T G I + DKR + ++ + + +K + +++ Sbjct: 263 FSMYPGQTSGVIETLDGYYIIRLEDKRKGKLKPISEVRTQIEGLLIQEQRQKLQQQWLDN 322 Query: 308 LRSNAIIHYY 317 L++ A I + Sbjct: 323 LKAKAFIKMF 332 >gi|254294289|ref|YP_003060312.1| SurA domain protein [Hirschia baltica ATCC 49814] gi|254042820|gb|ACT59615.1| SurA domain protein [Hirschia baltica ATCC 49814] Length = 426 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 105/303 (34%), Gaps = 18/303 (5%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRI---------RTTINGEVITDGDISKRIAL----L 63 + PI + A +S + +N + I+ D+ +R L Sbjct: 11 IAPVIASFLAYAPIPVHAQSADASNVPQIEAVEGTVAIVNDQPISYSDVRQRAQFILVSL 70 Query: 64 KLQKINGELEKI---AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 +Q + + A++ LI E L+ QE E + + ++ A + + EDF Sbjct: 71 GVQPNAETIRQAQTRAIEGLIDEKLQLQEAETYELVVEEAEIDDSIANIAARSNATPEDF 130 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 L + G+ + + W +V F + ++I N +++ Sbjct: 131 LQGLAQVGLSPRTLRDQIRADIAWRRLVGGRFGSRVRISSLQIDDNLERLNKSMEEPQYR 190 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 +F + + Q + + + +F++ + G+ +L ES Sbjct: 191 IAEIFLPGITQEEISVVYQGAEELKRQIENQAAPFEAVARQFSAAPTASAGGEIGWLGES 250 Query: 241 DLHPQFQNLLKKSQN-NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 L ++ + ++ T+P VT GV +++ +K E AL + Q T + Sbjct: 251 QLKKEYADQVRALSKPGLTDPIVTDNGVYLVSLMNK-QAPVEEALVGFKLKQIYATGADA 309 Query: 300 HEA 302 Sbjct: 310 VSK 312 Score = 42.4 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 44/103 (42%), Gaps = 2/103 (1%) Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVT-QKGVEYIA 271 ++C L+ ++ V+ ++L Q+Q+L +S N+ + P + + Sbjct: 321 ENCAALDNESASQEGVAFVDFGVTQLTELSQQYQDLFNAQSDNSHSAPIMVADNKAAIVY 380 Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +C G + +A + + ++ + Y++ LR +A I Sbjct: 381 VCSHEMSRGNMPTRADIEDKLHGEMVDMMASRYLRDLRRDATI 423 >gi|283835117|ref|ZP_06354858.1| peptidylprolyl cis-trans isomerase SurA [Citrobacter youngae ATCC 29220] gi|291069416|gb|EFE07525.1| peptidylprolyl cis-trans isomerase SurA [Citrobacter youngae ATCC 29220] Length = 428 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 104/311 (33%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L + G+ + Sbjct: 67 RHQILERLIMDQILLQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAQDGLNYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + +V N+ + L E+ A Q++ N + IP + Sbjct: 127 TYRSQIRKEMTISEVRNNEVRRRVTILPQEVDALAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + +++ + G+ + +L F Sbjct: 187 PTSDQVNAAESQARSVVDEARNGSDFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R + ++ + +P ++ Sbjct: 247 LSTAKKGDIIGPIRSGVGFHILKVNDMRGQSQSISVTEVHARHILLKPSPIMTDQQARLK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 86/289 (29%), Gaps = 25/289 (8%) Query: 47 NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 N EV I ++ + Q L + E S + + Sbjct: 143 NNEVRRRVTILPQEVDALAQQVGNQNDASTELN-----LSHILIPLPENPTSDQVNAAES 197 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 V ARN + ++ Q + IQ + + Sbjct: 198 QARSVVDEARNGSDFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIIG 257 Query: 152 -FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 G +++ + + ++I+V E R +L +Q K + A + + Sbjct: 258 PIRSGVGFHILKVNDMRGQSQSISVTEVHARHILLKPSPIMT-DQQARLKLEQIAADIKS 316 Query: 211 RLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVE 268 ++F+ G + P F++ K ++ + P + G Sbjct: 317 GKTTFAAAAKEFSQDPGSANQGGDLGWAAADIFDPAFRDALTKLNKGQMSAPVHSSFGWH 376 Query: 269 YIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + A ++++ R++A + Sbjct: 377 LIELLDTRKVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKI 425 >gi|163850906|ref|YP_001638949.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium extorquens PA1] gi|163662511|gb|ABY29878.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium extorquens PA1] Length = 300 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 31/278 (11%), Positives = 66/278 (23%), Gaps = 42/278 (15%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 + +NG+ IT D++ L D Sbjct: 47 ETVVARVNGQAITAADLAIAAEDPALSLPG---------------------------VDE 79 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 V + + + A+ S Y + + D ++ + Sbjct: 80 GAKQNLLVDYMVDLKVGAQAAESAEVGDAPEFKRKLAYFRDKLLLDDYLEREAKKAVTPE 139 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + + E R +L + K Sbjct: 140 AAKALYEQTVKSMKPEEEVRARHIL-----------VESEDEAKKIAARVKGGEDFAKIA 188 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + G + + + F + K + ++P TQ G + + +KR Sbjct: 189 GEVSKDPGSKTEGGDLGWFSQERMVKPFADAAFKMTPGQVSDPVKTQFGWHVLRVEEKRT 248 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + Q K + + + KLR A + Sbjct: 249 KPV--PTFDEMKEQIDQYLTRKAQQDTIVKLREAAKVE 284 >gi|37679292|ref|NP_933901.1| parvulin-like peptidyl-prolyl isomerase [Vibrio vulnificus YJ016] gi|37198035|dbj|BAC93872.1| parvulin-like peptidyl-prolyl isomerase [Vibrio vulnificus YJ016] Length = 625 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 42/406 (10%), Positives = 103/406 (25%), Gaps = 92/406 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY S+ + I G+ Sbjct: 7 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYLVSGSSNS-AAKVGNVEIGRGEFEMAY 65 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + K + +I + L Q E G+ V Sbjct: 66 QNERNRMQSQLGDYFSQLLADPAYVESFRKSVLDRMINDVLLDQHAESLGLRISDAQVRS 125 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + ++ + + + + L + G + F +Y+ + I ++ Sbjct: 126 MILAMPEFQQDGKFNQDVYQATLRRAGYSPDSFAEYMRRELIRSQLLDALQTSEFTLPGE 185 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRT------ 182 DF K E +I + K+ R ++ Sbjct: 186 VDAEGKLFTQTRDVRTVTLNIRDFADKVTLTEEDIQKYYDENKSRFTRPEQVKVSYIELA 245 Query: 183 -------------VLFSIPDNKLQNQGFVQKRIKDAE--------------ESRLRLPKD 215 + L +KR + Sbjct: 246 ADSLKQQITISDDEVKQYYQEHLDKYSSEEKRRVAHILIEGDDQAKAQAILDELNAGADF 305 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 + + + G+ ++ + P F+ K+ + T + G I + Sbjct: 306 AALAQDKSDDFGSADNGGELGWIERGVMDPAFEEAAFALKNVGDVTGLVKSDFGYHIIKL 365 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++ + + A + + K E +L A Y Sbjct: 366 EELKEPVVKPFSDVAAQIKQEMIDQKAVDQFYELQSELEKVAF-EY 410 >gi|330722348|gb|EGH00205.1| hypothetical protein imdm_1574 [gamma proteobacterium IMCC2047] Length = 260 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 82/281 (29%), Gaps = 42/281 (14%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 T+NG VIT I + + +L A++ L+ L QE Sbjct: 8 LVTVNGVVITREQIERELQS-ATGDDPDKLRDNAIRALVSRELLLQE------------- 53 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM- 161 + + ++ N + + E Sbjct: 54 ----------------------AVNWGLCERASVVNNPEQVIEQLLSNKIEVPVPDDESC 91 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN-KLE 220 E N+ + T E + + FS P + + ++R + E + P+ Sbjct: 92 ERFFNENRESFATAPECEVSHIFFSAPIADHEAREAARQRASEVLEKIHQNPQCFERMAR 151 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN-PYVTQKGVEYIAICDKRDL 278 + + + G + + P F+ L + + P T G I + D+ D Sbjct: 152 QESGCASAANGGYLGRISKGQTVPAFETALMAMHRGDISEQPVETGGGFHIIRVDDREDG 211 Query: 279 G--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 LK ++ +K YV L S A I + Sbjct: 212 EDLPFEILKTWIRQNLINQSRQKAIDGYVNGLASKAQIEGF 252 >gi|218529730|ref|YP_002420546.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium chloromethanicum CM4] gi|240138037|ref|YP_002962509.1| putative cell-binding factor 2 precursor (Major antigen peb4A), cbf2 [Methylobacterium extorquens AM1] gi|218522033|gb|ACK82618.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium chloromethanicum CM4] gi|240008006|gb|ACS39232.1| putative cell-binding factor 2 precursor (Major antigen peb4A), cbf2 [Methylobacterium extorquens AM1] Length = 300 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 31/278 (11%), Positives = 66/278 (23%), Gaps = 42/278 (15%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 + +NG+ IT D++ L D Sbjct: 47 ETVVARVNGQAITAADLAIAAEDPALSLPG---------------------------VDE 79 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 V + + + A+ S Y + + D ++ + Sbjct: 80 GAKQNLLVDYMVDLKVGAQAAESAKVGDAPEFKRKLAYFRDKLLLDDYLEREAKKAVTPE 139 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + + E R +L + K Sbjct: 140 AAKALYEQTVKSMKPEEEVRARHIL-----------VESEDEAKKIAARVKGGEDFAKIA 188 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + G + + + F + K + ++P TQ G + + +KR Sbjct: 189 GEVSKDPGSKTEGGDLGWFSQERMVKPFADAAFKMTPGQVSDPVKTQFGWHVLRVEEKRT 248 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + Q K + + + KLR A + Sbjct: 249 KPV--PTFDEMKEQIDQYLTRKAQQDTIVKLREAAKVE 284 >gi|84514873|ref|ZP_01002236.1| PPIC-type PPIASE domain protein [Loktanella vestfoldensis SKA53] gi|84511032|gb|EAQ07486.1| PPIC-type PPIASE domain protein [Loktanella vestfoldensis SKA53] Length = 270 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 27/297 (9%), Positives = 78/297 (26%), Gaps = 51/297 (17%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK---INGELEKIAVQE 79 + + + + + + IT G++ ++L Q + L V + Sbjct: 2 AVSLSITTGAVAQDVTADTVVAKVGDTEITVGELIIARSMLPAQYAQFPDEVLFTGLVDQ 61 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 L+ + L +E + + N Sbjct: 62 LVQQQLLADALETTPPSVIYTIQNEQ---------------------------------- 87 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + V+ + ++ + E+ +L + D + + Sbjct: 88 RSLMAAQVIDDITQTSINQELLQEAYQDRFADAPETPEFRAAHLLVATEDEANAAKAQLD 147 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT 258 + ++ + + G + + +F+ + + + Sbjct: 148 A-----------GEAFADVAAAVSTDVTSANGGDLGWFGAGAMVEEFETAVMALEIDEIS 196 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 +P+ TQ G + + D+R + Q + E Y+ +L + + Sbjct: 197 DPFETQFGWHIVTLTDQRARPA--PTFEQVVQQLSAELQEAAVIAYLDELSAATTVE 251 >gi|319653565|ref|ZP_08007664.1| hypothetical protein HMPREF1013_04281 [Bacillus sp. 2_A_57_CT2] gi|317394764|gb|EFV75503.1| hypothetical protein HMPREF1013_04281 [Bacillus sp. 2_A_57_CT2] Length = 292 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 35/308 (11%), Positives = 100/308 (32%), Gaps = 26/308 (8%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K + + + + I + T+NGE I+ ++ +R+ + Sbjct: 4 KKVIYWILGSVVTIGAAAAIFFTIKEDDAAATVNGEEISRDELHERLV--------AQYG 55 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + + LI E + QE +K + ++ +A + G + L+ G+ Sbjct: 56 QELLDSLITEKVIDQEAKKENVKVTQEEIDEEKAVYAESYG-GEDALKQTLESSGLSMAD 114 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 F++ + +++ + E + + K +E + + D + Sbjct: 115 FEEDIESYLATKKLLE----PRIEISEEAMKTYFDENKESFAQEEQVSASHILVEDEETA 170 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKK 252 + ++++ + G + + D+ +F+ + Sbjct: 171 K---------EVIGKLNDGGDFAKLAAEYSTDESNKDAGGDLGFFGKGDMVEEFEEVAFS 221 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 ++P T+ G I + +K++ +K + T+++ ++++ Sbjct: 222 LEPGKISDPVKTEYGYHVIKVAEKQEAKEAAYEDVKEEVKNTLFETEMQTEYTAWLEEKF 281 Query: 310 SNAIIHYY 317 I Y Sbjct: 282 EEYEIKNY 289 >gi|322834453|ref|YP_004214480.1| SurA domain protein [Rahnella sp. Y9602] gi|321169654|gb|ADW75353.1| SurA domain protein [Rahnella sp. Y9602] Length = 431 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 99/319 (31%), Gaps = 20/319 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK----- 67 +K T + + C ++ + ++ +N V+ D+ +K Q Sbjct: 1 MKNWRTLLLGVTLCAST--AFAAPQEVDKVAAVVNNGVVLQSDVDSLFNSVKQQAQQAKQ 58 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + L + LI++ ++ Q + GIT V+ A+ +S + S L Sbjct: 59 QLPDDATLRHQILDRLIMDQIQLQMATRMGITPTDQDVDKAIAGIAQQNNISVDQLRSRL 118 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 G+ + ++ + + I +V ++ + L E+ +++ Sbjct: 119 AYDGMNYSTYRTQIRKEMIISEVRNSEVRRRVTILPQEVDQLAKQVAAQNGSGAEFNLSH 178 Query: 185 FSIPDNKLQNQGFV---QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 +P + Q V ++ K +++ + G + + Sbjct: 179 ILLPLPENPTQDQVDSAEQLAKKIVADLNNGADFGKLAITYSADSQALKGGNMGWGKLQE 238 Query: 242 LHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTK 296 L F + P + G + + D R + ++ + + Sbjct: 239 LPSLFAQALSTAQKGQVIGPIRSGVGFHILKVNDIRGDNKTVSVTEVHARHILLKPSVVM 298 Query: 297 IEKHEAEYVKKLRSNAIIH 315 + ++++ A I Sbjct: 299 TDAQARAKLEQV--AADIK 315 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 32/280 (11%), Positives = 78/280 (27%), Gaps = 20/280 (7%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ + + Q +G A L L E + + V Sbjct: 152 ILPQEVDQLAKQVAAQNGSG-----AEFNLSHILLPLPENPTQDQVDSAEQLAKKIVADL 206 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------FMLKYGNL 159 N + ++ + +Q + + G Sbjct: 207 NNGADFGKLAITYSADSQALKGGNMGWGKLQELPSLFAQALSTAQKGQVIGPIRSGVGFH 266 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 +++ + K ++V E R +L Q K + A + + ++ Sbjct: 267 ILKVNDIRGDNKTVSVTEVHARHILLKPSVVMTDAQA-RAKLEQVAADIKSGKATFADEA 325 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRD 277 ++ + G + P F++ + + + P + G I + D R Sbjct: 326 KQLSQDPGSANQGGDLGWASPDMYDPAFRDALMNLKKGEISAPVHSSFGWHLIQLIDTRQ 385 Query: 278 L-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + A K K + ++++ R+ A + Sbjct: 386 VDKTDAAQKERAYRMLFNRKFAEEAQTWMQEQRAEAYVKI 425 >gi|146278793|ref|YP_001168952.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides ATCC 17025] gi|145557034|gb|ABP71647.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides ATCC 17025] Length = 284 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 31/281 (11%), Positives = 78/281 (27%), Gaps = 50/281 (17%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKIAVQELIVETLKKQEIEKSG 94 + + T+NG+ IT G + A L Q + L K +++LI + Q +E + Sbjct: 31 TADTVVATVNGQEITLGHMIALRAGLPDQYQSLPDEALFKGILEQLIQQAALSQSVEGTV 90 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 D ++ + ++ Sbjct: 91 TKRDQLSLQNE---------------------------------ERGFLSAVAMRRVVEG 117 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + ++ + + EY +L ++ + Sbjct: 118 AVTDEALQAAYDARFADAAEQTEYNASHIL-----------VETEEEATKLKAEIEGGAD 166 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAIC 273 + + +S + G + + F++ + P TQ G + + Sbjct: 167 FADMAREHSSDGAAANGGSLGWFGLGMMVKPFEDAVVGMKPGAVAGPIETQFGWHLVKLN 226 Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + R E + + ++ A ++ ++ + A I Sbjct: 227 ETR--IAEKPTLDEMRDELAGQIEQEAIARHIDEVTAKATI 265 >gi|300715281|ref|YP_003740084.1| hypothetical protein EbC_06930 [Erwinia billingiae Eb661] gi|299061117|emb|CAX58224.1| uncharacterized protein [Erwinia billingiae Eb661] Length = 431 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 107/303 (35%), Gaps = 16/303 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ + ++ + + ++ +N V+ + D+ + +K Q L Sbjct: 7 LILGAALTASTAFAAPQVVDKVAAVVNNGVVLESDVDGMMQSVKSQAQQAGQQLPDDKTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 V+ L+++ + Q ++SGI ++ A ++ + S L G+ Sbjct: 67 RHQIVERLVMDNILLQMAKQSGIQVTDAQLDGAIQNIAAQNKMTPDQLRSRLAYDGMNYG 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +++ + + +V N+ + L E+ + +++ + + +P + Sbjct: 127 TYREQIRREMTISEVRNNEVRRRVTILPQEVDSLSKQVASQNNASTELNLSHILLPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 Q V + A++ + + +++ + G + +L F Sbjct: 187 PTQQQVDDQETLAKQLVSQSKSGADFGKLAITYSADPQALKGGNMGWGKIQELPSLFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + + P + G + + D R ++ ++ + +P ++ + Sbjct: 247 LVTAKKGDIIGPIRSGVGFHILKVNDVRGESQNVSVTEVHARHILLKPSPVMTDEQARQK 306 Query: 305 VKK 307 +++ Sbjct: 307 LEQ 309 Score = 83.2 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 82/289 (28%), Gaps = 25/289 (8%) Query: 47 NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 N EV I ++ + Q L L E D T Sbjct: 143 NNEVRRRVTILPQEVDSLSKQVASQNNASTELN-----LSHILLPLPENPTQQQVDDQET 197 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK------ 155 + V +++ + ++ + IQ + + K Sbjct: 198 LAKQLVSQSKSGADFGKLAITYSADPQALKGGNMGWGKIQELPSLFAQALVTAKKGDIIG 257 Query: 156 -----YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 G +++ + + +N++V E R +L Q QK + + Sbjct: 258 PIRSGVGFHILKVNDVRGESQNVSVTEVHARHILLKPSPVMTDEQA-RQKLEQVVADINS 316 Query: 211 RLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVE 268 + ++ + G + P F++ +K + + P + G Sbjct: 317 GKTTFAEEAKQLSQDPGSANQGGDLGWSSPEMYDPAFRDALMKLKKGQLSAPVHSSFGWH 376 Query: 269 YIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R+ A + Sbjct: 377 LIQLLDTRQVDKTDAAQKERAYRLLFNRKFAEEAQTWMQEQRAAAYVKI 425 >gi|206890347|ref|YP_002248393.1| PpiC-type peptidyl-prolyl cis-trans isomerase, putative [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742285|gb|ACI21342.1| PpiC-type peptidyl-prolyl cis-trans isomerase, putative [Thermodesulfovibrio yellowstonii DSM 11347] Length = 341 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 52/328 (15%), Positives = 115/328 (35%), Gaps = 14/328 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K F+ L F I + + ++ ++ +N +VIT ++ K + Sbjct: 14 INQKYLNCSIKFVFFLMIVFFCTQLLIFKLNAEENKFFVDKVIAVVNRDVITWSELYKYM 73 Query: 61 AL-----LKLQKINGELE------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 +K + + + + ++ LI L+ +E EK GI + + Sbjct: 74 EFTAKDEIKALNPDEKFKYFKAHEEEFLERLIDTKLQIEEAEKYGIFVTDSEIEGAINDI 133 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + L+ + F L K+G+ N +K+ L Q I + K + EI Sbjct: 134 KKKYALTEQAFLETLKKEGMSINDYKKMLKEQIIIGRALNTLVKSKIIITDAEINNYIAA 193 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 ++ + K +NQ ++ +I + + ++ + + + Sbjct: 194 HPELSCDDEGYYVSQI--FLKKRENQEELKAKINEVFKRLIQGEPFSKVASQMSEDVTAK 251 Query: 230 SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + G L + ++ + N K + + P +T+ G+ + G L Y+ Sbjct: 252 TGGAIGLLKKKEIASELSNLFSKMNIGQVSEPMMTEHGIFIFRLDGVCFKKGSEQLVNYV 311 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K +K + + LR A I Sbjct: 312 RSLLEDEKFKKDYKLWTRGLRQRAYIEI 339 >gi|120554754|ref|YP_959105.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinobacter aquaeolei VT8] gi|120324603|gb|ABM18918.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinobacter aquaeolei VT8] Length = 617 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 38/395 (9%), Positives = 103/395 (26%), Gaps = 86/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + I + ++I I + + T+NG+ IT+ + + + Sbjct: 1 MLQDIRDNAQSTIAKVIVGLLIISLSIWGMDAIIGGFTGEPEVATVNGQDITEREFLRTV 60 Query: 61 ALLKLQK------------INGELEKIAVQELIVETLKKQEIEKSG---ITFDSNTVNYF 105 + Q+ ++ + + LI E + Q+ + G D +++ Sbjct: 61 QMESQQRLMQMENRDQSLLDEDQIRRDVLDALIREAVLTQDAQSQGLELTDADIDSLITQ 120 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-------------- 151 Q + + + F + + G+G F++ + + + Sbjct: 121 MPQFQVDGQFNRDRFVATVRNVGMGVAEFRESIRKNYVVNQIRAAIAQTGVVAPENAAHL 180 Query: 152 -------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + E ++ A + N + + ++ L Sbjct: 181 LAIQNQTRDFRVLTLDGSSVQDQVDVTEADVQAYYDENLNQFRQPEQVDAAYITLSQGAL 240 Query: 193 QNQGFVQKRIKD----------------------------------AEESRLRLPKDCNK 218 V + ++ + Sbjct: 241 AESIEVAEDELRTYYEERAEEYAREERRAAHILVEAGDEGQATLATIQQRLEKGESFAVL 300 Query: 219 LEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276 E+++ + G + F++ + + P T G+ I + + R Sbjct: 301 AEEYSVDTVSAQEGGDLGFAGRGVYDEAFEDALFGLEEGEVSGPVETSFGLHLIKLEEVR 360 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ L +E ++RS Sbjct: 361 --RSDVPAFDELREDLRLELARTKASERFAEVRSQ 393 >gi|323160075|gb|EFZ46037.1| chaperone surA [Escherichia coli E128010] Length = 428 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPEIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPEIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|212636811|ref|YP_002313336.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella piezotolerans WP3] gi|212558295|gb|ACJ30749.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella piezotolerans WP3] Length = 434 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 40/317 (12%), Positives = 106/317 (33%), Gaps = 19/317 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 +K ++ + V + + R+ IN +I + +++ + +K N Sbjct: 1 MKRCNRLIFALLTLAMSQVVHAAVEPLDRVTVQINEGIILESEVAGMVKTIKANAANAGQ 60 Query: 71 ------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L ++ LI+ L+ Q ++ G+ ++ A+ +S ED + + Sbjct: 61 KLPSDTALRTQVIERLILTRLQMQMADRIGLHIGDLQLDQTIANIAKEQNISVEDMRAQI 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + G +++ L + ++ + + EI + +++ + Sbjct: 121 ESDGTSFAQYREQLREEVTLGEIQRIQVQRRIQVSPQEINNLVSLINEQGLKDVEFQIGH 180 Query: 185 FSIPDNKLQNQGFVQ---KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I ++ KR + + +S + G Y+ ++ Sbjct: 181 ILIDVPSDATSAQLEASSKRADVVLKRLKDGDDFRSIAIAASSGPKALEGGIWDYMNINE 240 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297 + F + + N+ P + G+ + I D R E ++ + +P Sbjct: 241 MPTLFAEVVNDAKVNDIIGPIKSGAGLHILKIMDARGLQTQEIEEVKSRHILLKPSPILS 300 Query: 298 EKHEA----EYVKKLRS 310 E+ ++ ++RS Sbjct: 301 EERAKGMMDRFLAQIRS 317 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 29/294 (9%), Positives = 78/294 (26%), Gaps = 27/294 (9%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 E +T G+I + ++Q E+ + LI E K + G + Q Sbjct: 136 EEVTLGEIQRIQVQRRIQVSPQEINNLV--SLINEQGLKDVEFQIGHILIDVPSDATSAQ 193 Query: 109 HARNTGLSAEDFSSFLD---------------------KQGIGDNHFKQYLAIQSIWPDV 147 ++ + D + + L + + Sbjct: 194 LEASSKRADVVLKRLKDGDDFRSIAIAASSGPKALEGGIWDYMNINEMPTLFAEVVNDAK 253 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 V + + I T +++ + + + ++ + + Sbjct: 254 VNDIIGPIKSGAGLHILKIMDARGLQTQEIEEVKSRHILLKPSPILSEERAKGMMDRFLA 313 Query: 208 SRLRLPKDCNK-LEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 +++ V G+ + + P F+ L + + P+ + Sbjct: 314 QIRSGEAKFEDIARQYSEDPGSAVKGGELGWADPNVWVPAFKQALNSLKKGEISEPFRST 373 Query: 265 KGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + + +R K + ++ ++R+ A I + Sbjct: 374 HGWHIVQLEGRRTTDATEQFNTNRAHQLIYRRKFNEELQNWLDEMRAEAFIDIF 427 >gi|161612428|ref|YP_001586393.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161361792|gb|ABX65560.1| hypothetical protein SPAB_00117 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 428 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 111/311 (35%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ + Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190 ++ + + I +V N+ + L E+ A + +N E + +L ++P+N Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDASTELNLSHILIALPEN 186 Query: 191 KLQNQGFVQKRIKDAE-ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 Q +R + E +++ + G+ + +L F Sbjct: 187 PTSEQVNDAQRQAENIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R + ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMNDQQARLK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEEI--AADIK 315 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 89/287 (31%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q + L + E S D+ Sbjct: 143 NNEVRRRITV--LPQEVDALAKQIGTQNDASTELN-LSHILIALPENPTSEQVNDAQRQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V+ ARN + ++ Q + IQ + + Sbjct: 200 ENIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + ++I+V E R +L +Q K + A + + Sbjct: 260 RSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMN-DQQARLKLEEIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270 ++++ G + P F++ L K + P + G I Sbjct: 319 TTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R + + A K K + A ++++ R++A + Sbjct: 379 ELLDTRKVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKI 425 >gi|188580734|ref|YP_001924179.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium populi BJ001] gi|179344232|gb|ACB79644.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium populi BJ001] Length = 300 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 32/278 (11%), Positives = 73/278 (26%), Gaps = 42/278 (15%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 + +NG+ IT D++ L +++ A Q L+V+ + Sbjct: 47 ETVVARVNGQAITAADLALAGEDPALSLPG--VDEGAKQNLLVDYMI------------- 91 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + + A+ + Y + + D ++ + Sbjct: 92 ------------DLKVGAQAAEAAKVGDSPEFKRKLAYFRDKLLLDDYLEREAKKAVTPE 139 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + + E R +L + K Sbjct: 140 AAKALYEQTVKSMKPEEEVHARHIL-----------VESEDEAKKIAARIKGGEDFAKIA 188 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + G + + + F + K + ++P TQ G + + +KR Sbjct: 189 AEVSKDPGSKTEGGDLGWFTQERMVKPFADAAFKMTPGQVSDPVKTQFGWHVLRVEEKRT 248 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + Q K + + + KLR A + Sbjct: 249 KPV--PTFDEMKEQIDQYLTRKAQQDTIVKLREAAKVE 284 >gi|212711199|ref|ZP_03319327.1| hypothetical protein PROVALCAL_02271 [Providencia alcalifaciens DSM 30120] gi|212686367|gb|EEB45895.1| hypothetical protein PROVALCAL_02271 [Providencia alcalifaciens DSM 30120] Length = 451 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 38/325 (11%), Positives = 102/325 (31%), Gaps = 18/325 (5%) Query: 5 VFTSLSDFIKLLTTYFVLII-FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63 + + ++ + LI+ S + ++ +N V+ + D+ I + Sbjct: 1 MRNKSQFYRTIMKNWRTLILGLMFASSASLAAPQQMDKVAAVVNNGVVLESDVQNMINTV 60 Query: 64 KLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 KL N L + + L+++ + Q + I VN AR L Sbjct: 61 KLNARNANQQVPDDQTLRQQIIDRLVMDNIMLQMANQMQINIPEEAVNTTIADIARQNNL 120 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + L GI ++ + + + +V N+ + L E+ A +M + Sbjct: 121 TLPQMEKRLTADGINIAKYRSEIRKEMLLAEVRNNEVRRRITILPQEVDALADQMDSQMN 180 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIG 232 + + IP + + K ++ + +++ + G Sbjct: 181 AQKGVNLSHILIPLPENPTPEQLAKAESLVDKILSDLKKGSDFGKLAIAYSADPQALKGG 240 Query: 233 KAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK-----RDLGGEIALKA 286 + +L F + + + P + G + + + + + Sbjct: 241 NMGWSRLQELPVVFSDELKNAKKGDIVGPIRSGVGFHILRVNEVSGDTHQPISVTEVKAR 300 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ +++P + + + +L Sbjct: 301 HILLKSSPIMDDATARQKLTQLAQE 325 Score = 76.6 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 20/168 (11%), Positives = 52/168 (30%), Gaps = 3/168 (1%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G + + + + + + QK + A+E R Sbjct: 270 IRSGVGFHILRVNEVSGDTHQPISVTEVKARHILLKSSPIMDDATARQKLTQLAQEIRNG 329 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269 ++ + + G+ + + P F++ +K + + P + G Sbjct: 330 RISFEEAAKENSEDPGSALKGGELGWNMPDVYDPAFRDALMKLKKGEISQPVPSSFGWHL 389 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R+ A ++ Sbjct: 390 IQLEDTRSVDKTDAAKKDQAYRLLFNRKFNEEAQTWMQEQRAAAYVNI 437 >gi|312882503|ref|ZP_07742244.1| peptidyl-prolyl cis-trans isomerase D [Vibrio caribbenthicus ATCC BAA-2122] gi|309369903|gb|EFP97414.1| peptidyl-prolyl cis-trans isomerase D [Vibrio caribbenthicus ATCC BAA-2122] Length = 619 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 42/403 (10%), Positives = 103/403 (25%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ S + +++ F + Y SS + + I+ GD + Sbjct: 1 MMERMREGASGVAVKVILGVIILSFVFTGVSGYIGSGASSS-AAKVGNDEISRGDFEREY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + Q K + +I + L ++ E G+ V Sbjct: 60 QNQRNQMQAQLGDYFSNLLADQNYVNTFRKSVLDRMIDDKLIERHAESLGLRVSDAQVRQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 + + + + + L + G + F + L + + Sbjct: 120 QIFEFPQFQVEGKFDEDVYQATLRRAGFTAHTFSEDLRKNILREQLRNAIEGTDFSLAGE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 DF K + EI Q+ + R ++ + Sbjct: 180 VESQSKLISQTRDVKKITLSLSDFAKKVKLSDEEINDYYQQHTSQYTRPEQMKVAYIELS 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 KL+N V +++ + + Sbjct: 240 AEKLKNNIVVSDNDAKAYYQDNIDKYTSEEQRRVSHILIQGDNKEKAQKVLDKLNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P+F+ K TT ++ G I + Sbjct: 300 ATLAKEDSEDVGSAEEGGSLGWIERDVMDPEFEKAAFALKQPGETTGLVKSEFGYHIIKL 359 Query: 273 CDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + + ++ + + K +L + A Sbjct: 360 DELKAPETESYETVEKAIKQELKDQKAADEFYALQAQLETQAY 402 >gi|260654336|ref|ZP_05859826.1| peptidyl-prolyl cis-trans isomerase family protein [Jonquetella anthropi E3_33 E1] gi|260630969|gb|EEX49163.1| peptidyl-prolyl cis-trans isomerase family protein [Jonquetella anthropi E3_33 E1] Length = 318 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 37/317 (11%), Positives = 82/317 (25%), Gaps = 42/317 (13%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKI--- 68 ++ + I +++ + A + +I + IT+ D++ IA Q+ Sbjct: 1 MRFNRVFLAAITVAATAGIAFAASADNDAKILAKVGPVTITERDMNMAIAAYPAQQRAYI 60 Query: 69 -NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 + + EL+ K D+ H R + + Sbjct: 61 ETPQGRAALLDELVN-FNLLALSGKEQNLQDTQAFKDAMQLHERQVLANLAGEKAIA--- 116 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + EI ++ IR I Sbjct: 117 -------------------------GSGDNISDAEIKQYYDAHQDSFFVPESIRASHILI 151 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLP----KDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 K + V + A + ++ + + +S V G + + + Sbjct: 152 SVPKGASDKEVAEAKDKAMDIIKKIKSGSLEFSKAAQDMSSCPSKVQGGDLGFFSKGQMV 211 Query: 244 PQFQNLLKK-SQNNT-TNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEK 299 P F+ + P T G I + D +KA + + + Sbjct: 212 PAFEKAAFALKPGEMTSEPVRTDFGFHIIKVTDAHPAKTMPLDDVKASIKSTLSSQAKLA 271 Query: 300 HEAEYVKKLRSNAIIHY 316 + + +LR + Sbjct: 272 AFQKAIAELRQKYPVEI 288 >gi|262378424|ref|ZP_06071581.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter radioresistens SH164] gi|262299709|gb|EEY87621.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter radioresistens SH164] Length = 441 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 35/314 (11%), Positives = 100/314 (31%), Gaps = 17/314 (5%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQK----- 67 K +F +V S +S+A + ++ VI D+ + +A LK Q Sbjct: 9 KYFKQFFKATALALVISSSMQSFAQPVDEVVAIVDNGVILKSDLIQGVAELKHQLETQKR 68 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSS 122 LEK A+ +LI+ + +++ + + D ++N ++ A +G Sbjct: 69 EVPPQAFLEKQALDQLILRQAQLEQVRRYNVKPDEKSLNEAVMKVASQSGTKTLEAFQQK 128 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + +A + + M + + ++ + + + Sbjct: 129 LDAMAPGTYESLRNRIAEDLAINRLRQQQVMSRIKISDQDVENFLKSPQGQAALGSQVHV 188 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + I Q V+ + + + ++++ V + +D+ Sbjct: 189 IHARITPKDKQT-ANVESVAQQVKNALNTSNDIQAISKQYSDTKVQVEGVDMGFRSLADI 247 Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL----KAYLSAQNTPTKI 297 + + TT + GV + + +++ + + ++ Q + Sbjct: 248 PAELAARVSALPVGQTTELIPARDGVHVLKVLERKTSEQKALVPQYQTRHILIQPSEVVS 307 Query: 298 EKHEAEYVKKLRSN 311 ++ + + + Sbjct: 308 PENAKHMIDNIYNR 321 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 31/270 (11%), Positives = 81/270 (30%), Gaps = 3/270 (1%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 I+D D+ + + Q G + + + + +E + +Q Sbjct: 163 KISDQDVENFLKSPQGQAALGSQVHVIHARITPKDKQTANVESVAQQVKNALNTSNDIQA 222 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + +D LA + V + ++ + + ++K Sbjct: 223 ISKQYSDTKVQVEGVDMGFRSLADIPAELAARVSALPVGQTTELIPARDGVHVLKVLERK 282 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HD 228 +T I +++ + + I + F++ Sbjct: 283 TSEQKALVPQYQTRHILIQPSEVVSPENAKHMIDNIYNRLKAGEDFTVLASTFSTDTGSA 342 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 G ++ + P+F+ +K + + P+ TQ G + + D R + Sbjct: 343 RDGGSLGWVSPGVMVPEFEEKMKSTPVGQVSAPFQTQFGWHILQVTDTRQQDMTEEYQER 402 Query: 288 L-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + E ++++LR+NA + Sbjct: 403 MARQILGERQFETELDSWLRELRANAYVEI 432 >gi|16759087|ref|NP_454704.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16763482|ref|NP_459097.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29140637|ref|NP_803979.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412363|ref|YP_149438.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|167550725|ref|ZP_02344482.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167989955|ref|ZP_02571055.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230361|ref|ZP_02655419.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168234847|ref|ZP_02659905.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168243501|ref|ZP_02668433.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168464364|ref|ZP_02698267.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820926|ref|ZP_02832926.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444526|ref|YP_002039322.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451624|ref|YP_002044060.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469029|ref|ZP_03075013.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736155|ref|YP_002113109.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248833|ref|YP_002145076.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263512|ref|ZP_03163586.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197361300|ref|YP_002140935.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198244102|ref|YP_002214044.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200386716|ref|ZP_03213328.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204926901|ref|ZP_03218103.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205351432|ref|YP_002225233.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207855605|ref|YP_002242256.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213427535|ref|ZP_03360285.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213648902|ref|ZP_03378955.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|224581934|ref|YP_002635732.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911150|ref|ZP_04654987.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289826182|ref|ZP_06545294.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|81677737|sp|Q5PDE6|SURA_SALPA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|81706931|sp|Q7CR87|SURA_SALTY RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|81766233|sp|Q8XEV3|SURA_SALTI RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|25513082|pir||AH0513 survival protein SurA precursor [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16418589|gb|AAL19056.1| peptidyl-prolyl cis-trans isomerase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16501377|emb|CAD01248.1| survival protein SurA precursor [Salmonella enterica subsp. enterica serovar Typhi] gi|29136261|gb|AAO67828.1| survival protein SurA precursor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56126620|gb|AAV76126.1| survival protein SurA precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194403189|gb|ACF63411.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194409928|gb|ACF70147.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455393|gb|EDX44232.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711657|gb|ACF90878.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195632865|gb|EDX51319.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197092775|emb|CAR58200.1| survival protein SurA precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212536|gb|ACH49933.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241767|gb|EDY24387.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197291654|gb|EDY31004.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197938618|gb|ACH75951.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603814|gb|EDZ02359.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204323566|gb|EDZ08761.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205271213|emb|CAR36001.1| survival protein SurA precursor [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324462|gb|EDZ12301.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205331363|gb|EDZ18127.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335129|gb|EDZ21893.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337413|gb|EDZ24177.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205342524|gb|EDZ29288.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206707408|emb|CAR31681.1| survival protein SurA precursor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224466461|gb|ACN44291.1| survival protein SurA precursor [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|267991763|gb|ACY86648.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301156721|emb|CBW16195.1| survival protein SurA precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911062|dbj|BAJ35036.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084330|emb|CBY94123.1| survival protein [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321222338|gb|EFX47410.1| Survival protein SurA precursor Peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615913|gb|EFY12830.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620698|gb|EFY17558.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623951|gb|EFY20788.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627399|gb|EFY24190.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322630706|gb|EFY27470.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638074|gb|EFY34775.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640560|gb|EFY37211.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647700|gb|EFY44185.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648050|gb|EFY44517.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656918|gb|EFY53204.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657371|gb|EFY53643.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663691|gb|EFY59891.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666524|gb|EFY62702.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672317|gb|EFY68429.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676371|gb|EFY72442.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679536|gb|EFY75581.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686135|gb|EFY82119.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323128410|gb|ADX15840.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194979|gb|EFZ80165.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200112|gb|EFZ85199.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201067|gb|EFZ86136.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209464|gb|EFZ94397.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212284|gb|EFZ97108.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216589|gb|EGA01315.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222472|gb|EGA06842.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225783|gb|EGA10003.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228676|gb|EGA12805.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236710|gb|EGA20786.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239789|gb|EGA23836.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242163|gb|EGA26192.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249412|gb|EGA33328.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252253|gb|EGA36104.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256656|gb|EGA40386.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261310|gb|EGA44897.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265510|gb|EGA49006.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271702|gb|EGA55120.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326621788|gb|EGE28133.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326626455|gb|EGE32798.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332987044|gb|AEF06027.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 428 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 105/311 (33%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ + Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ A +++ + I + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDASTELNLSHILIALPEN 186 Query: 193 QNQGFVQKRIKDAE---ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + AE E +++ + G+ + +L F Sbjct: 187 PTSEQVNDAQRQAESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R + ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMNDQQARLK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEEI--AADIK 315 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 89/287 (31%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q + L + E S D+ Sbjct: 143 NNEVRRRITV--LPQEVDALAKQIGTQNDASTELN-LSHILIALPENPTSEQVNDAQRQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V+ ARN + ++ Q + IQ + + Sbjct: 200 ESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + ++I+V E R +L +Q K + A + + Sbjct: 260 RSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMN-DQQARLKLEEIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270 ++++ G + P F++ L K + P + G I Sbjct: 319 TTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R + + A K K + A ++++ R++A + Sbjct: 379 ELLDTRKVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKI 425 >gi|90409117|ref|ZP_01217239.1| diadenosinetetraphosphatase [Psychromonas sp. CNPT3] gi|90309791|gb|EAS37954.1| diadenosinetetraphosphatase [Psychromonas sp. CNPT3] Length = 413 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 100/291 (34%), Gaps = 15/291 (5%) Query: 35 SWAMSSRIRTTINGEVITDGDISK-----RIALLKLQK---INGELEKIAVQELIVETLK 86 S +I +N EVI D+ + R LK+Q+ +L + + +LI ++L+ Sbjct: 1 STEHLDQIEAIVNQEVILSSDVKRMEKDIRARYLKMQQALPSKQKLRQQILDKLINDSLQ 60 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 Q E+ G+ D+ V+ Q + G + + L ++G F + + + Sbjct: 61 LQVAERMGLRLDNAQVDQTIQQILKKEGKNIAQYQQELSRKGQSYQAFSDSVRNELTINE 120 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 + + + E EI Q++ + + + + Q+ K Sbjct: 121 IRQMQVRQRLNISEQEINLMVQRLNKDGKKNTQFHFIHILLKTDPNAPLHAQQQAKKIM- 179 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK---SQNNTTNPYVT 263 + + + +++ + G + ++ F + + + + P+ T Sbjct: 180 QRLAQGESASSLARQYSQGPKALDGGDWGWRTVDEIPSLFADKFDELKTKKGDILGPFKT 239 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTP---TKIEKHEAEYVKKLRSN 311 + G+ I + DK+ + L+ +K + R Sbjct: 240 RLGLSIIQVSDKKGIKNTTTLEVNARHILIKSNIILSDKKAKLLLNTYRQE 290 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 20/157 (12%), Positives = 46/157 (29%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + +K T + + + L ++ +E Sbjct: 246 IQVSDKKGIKNTTTLEVNARHILIKSNIILSDKKAKLLLNTYRQEILEGKANFAELARAH 305 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL-G 279 + V G + + P+F++ + + P+ T G + + +KR Sbjct: 306 SQDPGSAVKGGNLGWADPNMYVPEFRDRAQSLRIGEISKPFHTMHGWHILEVLEKRQADT 365 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 E A K + + ++ ++R A I Sbjct: 366 TEKASKQKAYSILYKQRFPAEVYAWMNEIRQEAYIKI 402 >gi|13472995|ref|NP_104562.1| cell binding factor 2 precursor [Mesorhizobium loti MAFF303099] gi|14023743|dbj|BAB50348.1| mll3467 [Mesorhizobium loti MAFF303099] Length = 303 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 90/316 (28%), Gaps = 60/316 (18%) Query: 18 TYFVLIIFCIVPIVSYKSWAMS-----------SRIRTTINGEVITDGDI---SKRIALL 63 F L C+ P+++ ++ + + + T+NG+ +T+ D+ ++ Sbjct: 15 LAFGLSALCLSPVMAQEAAPAAPAAPAAAPVDPNAVVATVNGQPLTEADLVLAEGELSQQ 74 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 Q + A+ I + + G+ D + Sbjct: 75 FAQLPPEQRRAAALSAAIEIRVMAAKAVTDGLDKDPDFQRR------------------- 115 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 +L +++ ++V+ + K + E+ +++ V E R + Sbjct: 116 -----------MAFLQQRALHGEMVEKGVVNKVTDAEIRARYDQEIANTPPVNEVHARHI 164 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDL 242 L + + + S + G + + Sbjct: 165 LVKTKEEAEA-----------IIKQLDGGGDFQKLANEHTSDPSGKSNGGDLGWFGPGQM 213 Query: 243 HPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 P+F + T P TQ G I + DKR + Q I Sbjct: 214 VPEFDKAAFALEVGKYTEQPVQTQFGWHVIKLEDKRAKQP--PAFDDVKDQAKQAVIRDK 271 Query: 301 EAEYVKKLRSNAIIHY 316 VK LR+ A + Sbjct: 272 YFALVKSLRAGAKVEI 287 >gi|253998626|ref|YP_003050689.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylovorus sp. SIP3-4] gi|313200700|ref|YP_004039358.1| ppic-type peptidyl-prolyl cis-trans isomerase [Methylovorus sp. MP688] gi|253985305|gb|ACT50162.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylovorus sp. SIP3-4] gi|312440016|gb|ADQ84122.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylovorus sp. MP688] Length = 267 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 92/307 (29%), Gaps = 52/307 (16%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG--DISKRIALLKLQKING 70 +K+ + I+ + ++ + T+NG+ I D + A + Q ++ Sbjct: 1 MKITLRALLAIVAIGISSLAMAA----DPAVATVNGKPIKQSLFDYITKDAAARGQNVDD 56 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + + V LI L QE ++SG V Sbjct: 57 NVRTVIVNRLISSELIYQEAQRSGFDKRPEYVAKQ------------------------- 91 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + A + + +++ + ++ + + +EY R +L Sbjct: 92 -----ELAARELLVNSYLEDYLKKNPVSDAAVKAEYEKYKQEVGDKEYNARHIL------ 140 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQF-QN 248 + KD + ++ + + G + + F + Sbjct: 141 -----VATEAEAKDIIAQLGKGADFAKLAKEKSKDPGGKENGGDLGWFAPGSMVKPFSEA 195 Query: 249 LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + K + + T +P TQ G I + D RD + ++ + + Sbjct: 196 VTKMKKGSYTADPVQTQFGWHVIKLEDVRDAQP--MPFEKVQDALKKQLQQRQLEKLLSD 253 Query: 308 LRSNAII 314 LRS A I Sbjct: 254 LRSKAKI 260 >gi|229521840|ref|ZP_04411257.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae TM 11079-80] gi|229340765|gb|EEO05770.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae TM 11079-80] Length = 619 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 32/403 (7%), Positives = 91/403 (22%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y + + + I+ GD + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYL-ISGGNNAAAKVGNAEISRGDFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q G+ V Sbjct: 60 QNERNRMQAQLGDYFSNLLADPAYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDEQVRQ 119 Query: 105 ---FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 Q + + + L + G + +YL + ++ Sbjct: 120 LILEIPQFQSQGVFDSAAYQATLRRAGFTPEMYAEYLRKDLVRNQLMSALQGSEFSLSGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 DF K + EI + R ++ Sbjct: 180 VNLQDQLISQTRDIRTITLSLEDFAKKVTLSDEEIEQYYKTNTERFTRPEQVKVSYVELS 239 Query: 185 ---------------FSIPDNKLQNQGFVQKRIKDAE--------------ESRLRLPKD 215 L ++R + Sbjct: 240 ADGLKAQVSVDDAAAQQYYQEHLDKYSTAEQRNVSHILIEGNDEQKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ + + + G I + Sbjct: 300 ATLAKEKSQDLGSAAEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 D + + ++ + + + +L A Sbjct: 360 DDIKTPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMAF 402 >gi|255320532|ref|ZP_05361713.1| chaperone SurA [Acinetobacter radioresistens SK82] gi|255302504|gb|EET81740.1| chaperone SurA [Acinetobacter radioresistens SK82] Length = 436 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 35/314 (11%), Positives = 100/314 (31%), Gaps = 17/314 (5%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQK----- 67 K +F +V S +S+A + ++ VI D+ + +A LK Q Sbjct: 4 KYFKQFFKATALALVISSSMQSFAQPVDEVVAIVDNGVILKSDLIQGVAELKHQLETQKR 63 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSS 122 LEK A+ +LI+ + +++ + + D ++N ++ A +G Sbjct: 64 EVPPQAFLEKQALDQLILRQAQLEQVRRYNVKPDEKSLNEAVMKVASQSGTKTLEAFQQK 123 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + +A + + M + + ++ + + + Sbjct: 124 LDAMAPGTYESLRNRIAEDLAINRLRQQQVMSRIKISDQDVENFLKSPQGQAALGSQVHV 183 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + I Q V+ + + + ++++ V + +D+ Sbjct: 184 IHARITPKDKQT-ANVESVAQQVKNALNTSNDIQAISKQYSDTKVQVEGVDMGFRSLADI 242 Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL----KAYLSAQNTPTKI 297 + + TT + GV + + +++ + + ++ Q + Sbjct: 243 PAELAARVSALPVGQTTELIPARDGVHVLKVLERKTSEQKALVPQYQTRHILIQPSEVVS 302 Query: 298 EKHEAEYVKKLRSN 311 ++ + + + Sbjct: 303 PENAKHMIDNIYNR 316 Score = 89.0 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 31/270 (11%), Positives = 81/270 (30%), Gaps = 3/270 (1%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 I+D D+ + + Q G + + + + +E + +Q Sbjct: 158 KISDQDVENFLKSPQGQAALGSQVHVIHARITPKDKQTANVESVAQQVKNALNTSNDIQA 217 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + +D LA + V + ++ + + ++K Sbjct: 218 ISKQYSDTKVQVEGVDMGFRSLADIPAELAARVSALPVGQTTELIPARDGVHVLKVLERK 277 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HD 228 +T I +++ + + I + F++ Sbjct: 278 TSEQKALVPQYQTRHILIQPSEVVSPENAKHMIDNIYNRLKAGEDFTVLASTFSTDTGSA 337 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 G ++ + P+F+ +K + + P+ TQ G + + D R + Sbjct: 338 RDGGSLGWVSPGVMVPEFEEKMKSTPVGQVSAPFQTQFGWHILQVTDTRQQDMTEEYQER 397 Query: 288 L-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + E ++++LR+NA + Sbjct: 398 MARQILGERQFETELDSWLRELRANAYVEI 427 >gi|258542094|ref|YP_003187527.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO 3283-01] gi|256633172|dbj|BAH99147.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO 3283-01] gi|256636229|dbj|BAI02198.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO 3283-03] gi|256639284|dbj|BAI05246.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO 3283-07] gi|256642338|dbj|BAI08293.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO 3283-22] gi|256645393|dbj|BAI11341.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO 3283-26] gi|256648448|dbj|BAI14389.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO 3283-32] gi|256651501|dbj|BAI17435.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654492|dbj|BAI20419.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO 3283-12] Length = 454 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 85/267 (31%), Gaps = 11/267 (4%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI-------NGELEKIAVQELIVETLK 86 I IN +T D+ R L L L +++LI E L+ Sbjct: 46 AQPEPDDMILAVINSIPLTKRDVDNRGKLFALSTGLPLTPDLMARLRPQIIRQLIDERLR 105 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 QEI I + R G+ L + G+ + +Q W Sbjct: 106 TQEILSRHINVPPEQIAGAITNIERRNGMPEGTLREHLAQDGVSLTTLIDQIRVQIGWIQ 165 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V++ + + +I + +K R +F ++ +Q + + Sbjct: 166 VLRQELGARSRVSAQDIAQRQAALKREEGRTEYELAEIFVKVEDPRHDQEELDFTNTVIQ 225 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ---NNTTNPYVT 263 E R + +F+ + G ++ E +L P ++++ +NP Sbjct: 226 ELR-KGAPFPIVAAQFSQSQTALDGGSMGWVQEDELDPAVVQVVRQMPVGVGAISNPIKV 284 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSA 290 G I + KR +G E+ + Sbjct: 285 PGGYVIITLNGKRVIGHEMGHLITIRQ 311 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 52/145 (35%), Gaps = 2/145 (1%) Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR-LRLPKDCNKLEKFASKIHDVS 230 + IR V S Q+ + + ++ C ++E + Sbjct: 301 HEMGHLITIRQVFLSFDTPLDPQHITPQQESTLQKAMQVIQNTHSCTEMEALNKAEGEKR 360 Query: 231 IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 + L+PQ Q+L + + P V++ G++ + +C K++ + ++ Sbjct: 361 PTDPGEMPLERLNPQMQSLLADLPEGKVSRPLVSRDGIDLLMVCTKKEKNFSNRSPSEIA 420 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAII 314 Q ++E+ + L AII Sbjct: 421 DQLMNERVEQAARQLDSDLHRRAII 445 >gi|254487361|ref|ZP_05100566.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter sp. GAI101] gi|214044230|gb|EEB84868.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter sp. GAI101] Length = 411 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 108/290 (37%), Gaps = 11/290 (3%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M T ++ + LT LI ++ + + + +N V+T+ ++ +R Sbjct: 1 MWE--VTKMN--LNRLTRSIGLIGLALMTATPLAAQNLFAP-VARVNESVVTEFEVQQRQ 55 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 L+L G A+ LI E L+ + + ++GI + + A LS +F Sbjct: 56 RFLQLLNAPGATRDGALTSLIDERLRNEAVAEAGIALTPEGIEDSLTEFAARANLSTAEF 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 +S L++ G+ F+ ++ W ++++ + + + EI + VR L Sbjct: 116 TSALERSGVAKETFRDFVVNSVGWRELIRARYNARVQITDAEINRALGATRGGGVRVLLS 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 ++ + P + + ++ + ++++ G+ ++ S Sbjct: 176 EIIIPAPPKDAARVNALAEQ-----IAQSRSAAEFSGFASRYSATASRGRGGRLEWQDLS 230 Query: 241 DLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 L P Q L+ + T P V + D ++ G + + + Sbjct: 231 SLPPSLQPLILGLAPGEVTAPLPIPNAVALFQLRDIQETGAATPVYSAIE 280 Score = 40.8 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 8/79 (10%), Positives = 30/79 (37%), Gaps = 3/79 (3%) Query: 239 ESDLHPQFQNL-LKKSQNNTTNPYVTQKG--VEYIAICDKRDLGGEIALKAYLSAQNTPT 295 +++ K + G + ++ +CD+ + + ++ Sbjct: 330 PAEIPQDIAIELSKLDPGEVSTALTRANGQTLMFLMMCDRTSASNQDTSRTDVANALRQE 389 Query: 296 KIEKHEAEYVKKLRSNAII 314 ++ + + +++LR++A I Sbjct: 390 RLSGYADQLLEQLRADARI 408 >gi|157159524|ref|YP_001456842.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli HS] gi|157065204|gb|ABV04459.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli HS] Length = 428 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPGSANQGGDLGWATPDVFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|329114153|ref|ZP_08242915.1| Chaperone SurA [Acetobacter pomorum DM001] gi|326696229|gb|EGE47908.1| Chaperone SurA [Acetobacter pomorum DM001] Length = 454 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 85/267 (31%), Gaps = 11/267 (4%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI-------NGELEKIAVQELIVETLK 86 I IN +T D+ R L L L +++LI E L+ Sbjct: 46 AQPEPDDMILAVINSIPLTKRDVDNRGKLFALSTGLPLTPDLMARLRPQIIRQLIDERLR 105 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 QEI I + R G+ L + G+ + +Q W Sbjct: 106 TQEILSRHINVPPEQIAGAITNIERRNGMPEGTLREHLAQDGVSLTTLIDQIRVQIGWIQ 165 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V++ + + +I + +K R +F ++ +Q + + Sbjct: 166 VLRQELGARSRVSAQDIAQRQAALKREEGRTEYELAEIFVKVEDPRHDQEELDFTNTVIQ 225 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ---NNTTNPYVT 263 E R + +F+ + G ++ E +L P ++++ +NP Sbjct: 226 ELR-KGAPFPIVAAQFSQSQTALDGGSMGWVQEDELDPAVVQVVRQMPVGVGAISNPIKV 284 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSA 290 G I + KR +G E+ + Sbjct: 285 PGGYVIITLNGKRVIGHEMGHLITIRQ 311 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 52/145 (35%), Gaps = 2/145 (1%) Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR-LRLPKDCNKLEKFASKIHDVS 230 + IR V S Q+ + + ++ C ++E + Sbjct: 301 HEMGHLITIRQVFLSFDTPLDPQHITPQQESTLQKAMQVIQNTHSCTEMEALNKAEGEKR 360 Query: 231 IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 + L+PQ Q+L + + P V++ G++ + +C K++ + ++ Sbjct: 361 PTDPGEMPLERLNPQMQSLLADLPEGKVSRPLVSRDGIDLLMVCTKKEKNFSNRSPSEIA 420 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAII 314 Q ++E+ + L AII Sbjct: 421 DQLMNERVEQAARQLDSDLHRRAII 445 >gi|303327130|ref|ZP_07357572.1| peptidyl-prolyl cis-trans isomerase domain protein [Desulfovibrio sp. 3_1_syn3] gi|302863118|gb|EFL86050.1| peptidyl-prolyl cis-trans isomerase domain protein [Desulfovibrio sp. 3_1_syn3] Length = 312 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 105/318 (33%), Gaps = 25/318 (7%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQKINGELE 73 + F+L++ V A +++ +NG+VIT D+ K L + + Sbjct: 1 MKKTFILLLAIWFCGVCGVQAAQLNKVAAVVNGQVITMFDLQKTALPELGRARLNPNNPA 60 Query: 74 KI---------AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + + +I++ L QE ++ I+ + V+ V+ + L+ + F + L Sbjct: 61 QAKEVEKVFRKVLDMMIMDILLGQEAKRLKISVSPSEVDNELVKMMKARNLTKQQFEAQL 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 +Q I + +Q + ++ + K EI A + K+ + + Sbjct: 121 AQQKISIDEIRQNFEKSLLRQKIMGMEVGRKVVVTPAEIKAYYEAHKDNLYDRSGLHMGV 180 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 N Q + K++ + G + L+P Sbjct: 181 LVYAPNVNAKSIAAQIKSGK--------LSFEEAAAKYSIAPNKDKGGDMGPVEWDRLNP 232 Query: 245 QFQNL-LKKSQNNTTNPYVTQK---GVEYIA--ICDKRDLGGEIALKAYLSAQNTPTKIE 298 +++ +K + T+ + Q V + + A K Sbjct: 233 EWEGRLIKMKPGDVTDIFDLQGRKAQVHLFRPGGDNAEKQLTLEQATPQIDAILRQPKAM 292 Query: 299 KHEAEYVKKLRSNAIIHY 316 + +Y +LR+ A+I Sbjct: 293 ERFEDYTSQLRNKAVIDI 310 >gi|126732888|ref|ZP_01748679.1| PPIC-type PPIASE domain protein [Sagittula stellata E-37] gi|126706664|gb|EBA05738.1| PPIC-type PPIASE domain protein [Sagittula stellata E-37] Length = 329 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 32/284 (11%), Positives = 82/284 (28%), Gaps = 50/284 (17%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKIAVQELIVETLKK 87 + + +++ T+ G IT G + A L Q +L +Q+LI + + Sbjct: 67 GAALTAEDLAQVVATVGGTDITVGHMMVAKASLPQQYQQIPDAQLWDGLLQQLIQQEVL- 125 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 S ++ + + Sbjct: 126 --------------------------------SQSKDAEETDLVRLSMENERRSLMAAVA 153 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + E++ + + +EY +L ++ ++ Sbjct: 154 ITTVAERAVTEDEVQAVYQRDFVDVDQGKEYNASHIL-----------LETKEAAEEVLA 202 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKG 266 + ++ + G + + FQ ++ + + T P TQ G Sbjct: 203 EVKGGADFATVAREKSTGPSGPNGGSLGWFGAGMMVEPFQVAVESLAPGDVTGPVETQFG 262 Query: 267 VEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 I + + R + A++A + + K+E+H ++++ Sbjct: 263 WHVIKLNETRTQEAPPLEAVRAEIVQKIQQDKVEEHIDSLMRQM 306 >gi|313679732|ref|YP_004057471.1| ppic-type peptidyl-prolyl cis-trans isomerase [Oceanithermus profundus DSM 14977] gi|313152447|gb|ADR36298.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oceanithermus profundus DSM 14977] Length = 308 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 80/292 (27%), Gaps = 26/292 (8%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ------------KINGELEKIAVQELIVETLKK 87 + + VIT D+ + L Q L+K +Q ++ + + Sbjct: 24 ETVVARVGDHVITQADLDLQFDLFLRQSTGGAALSDEARAQLAPLKKQYLQRMVQDAVVV 83 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 Q E+ G+ D T++ + A+ F + L + GI D + + ++ Sbjct: 84 QAAERLGLAPDEATIDRRV-EQAKQRLSGEAAFLAALKQYGIPDVATYRRMTYDAMAYKA 142 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + E + I T +P + D Sbjct: 143 MIGWIRQRLRISEAATRMLYLLDREAYAEPEQICTAHILVPSREEAE---------DVIA 193 Query: 208 SRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + + G + P+F+ + P TQ Sbjct: 194 RLKGGADFAELAREVSQDPGSAPRGGDLGCVALGRFVPEFERAALALQPGQVSEPVQTQF 253 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G I + D+R + Q +VK L ++A Y Sbjct: 254 GWHVIRMNDRRPARV--LPYEEVRGQIRAKIEGLAIERFVKNLVAHADAEVY 303 >gi|294340130|emb|CAZ88501.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomonas sp. 3As] Length = 262 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 96/306 (31%), Gaps = 52/306 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG---DISKRIALLKLQKINGE 71 +L +L + + + WA + T+NG+ I ++ +A + Q + + Sbjct: 1 MLKLSRILAVAALSCAFAAPVWAQN---IATVNGKPIPQSLADSVANSMAKQQGQAVTPQ 57 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L+++ ELI + QE +K G+ ++ + Sbjct: 58 LKEMVKNELISREVMVQEADKLGLDKETAVQDEI-------------------------- 91 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 +A Q+I + N ++ K+ + +I A K + Sbjct: 92 -----RIARQNILIRALFNAYLQKHPITDAQIKAEYDKFVKSFGSTEYKAQHILVPS--- 143 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNL 249 +K +D + K +K++ + G + ++ P F + L Sbjct: 144 -------EKEAQDIIAQLKKGAKFSELAKKYSKDTGSAANGGDLGWSTPNNYVPPFAKAL 196 Query: 250 LKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 T P +Q G I + R L Q + +Y +L Sbjct: 197 EALKPGQYTQTPVQSQFGWHVIKLDATRPAKA--PTLDQLKPQIQAELQRQEVTKYQDEL 254 Query: 309 RSNAII 314 R+ A I Sbjct: 255 RAKAKI 260 >gi|221640663|ref|YP_002526925.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides KD131] gi|332559643|ref|ZP_08413965.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides WS8N] gi|221161444|gb|ACM02424.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides KD131] gi|332277355|gb|EGJ22670.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides WS8N] Length = 284 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 77/281 (27%), Gaps = 50/281 (17%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKIAVQELIVETLKKQEIEKSG 94 + + T+NG+ IT G + A L Q + L K +++LI + Sbjct: 31 TADTVVATVNGQDITLGHMIALRAGLPDQYQSLPDDALFKGILEQLIQQAALA------- 83 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 S D Q + ++ Sbjct: 84 --------------------------QSIEGSVTKRDQLSLQNEERGFLSAVAMRRVVEG 117 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + ++ + + EY +L S D + + + Sbjct: 118 AVTDEALQAAYDARFADAAPQTEYNASHILVSSEDEAKKLKEEID-----------GGAD 166 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAIC 273 ++ +S + G + + F++ + K P TQ G + + Sbjct: 167 FATLAKEHSSDGAAANGGSLGWFGLGMMVKPFEDAVVKMKPGEVVGPIQTQFGWHLVKLN 226 Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + R E + + ++ A ++ ++ + A I Sbjct: 227 ETR--IAEKPSLDDMRDELAGQIEQEAVARHIDEVTAKAEI 265 >gi|253999166|ref|YP_003051229.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylovorus sp. SIP3-4] gi|253985845|gb|ACT50702.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylovorus sp. SIP3-4] Length = 632 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 54/397 (13%), Positives = 104/397 (26%), Gaps = 94/397 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + ++ L V I F IV I +Y A SS ++GE I+ + + + Sbjct: 1 MLEAIRERSKSWLAKLILAAVTIPFAIVGIDTYLRDAGSSVSIAKVDGESISVQEYNNSM 60 Query: 61 ALLKLQKI-----------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--- 106 L+ Q ++++ + LI+ L + KS ++ Sbjct: 61 QRLRNQLQAEGKTDPSVLEQPDVKQSILDRLIINRLLNNAVTKSHFAIGDAALSDHIITL 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------------- 149 + N S E + L + + F+ + + + Sbjct: 121 PEFQENGKFSQETYDRLLTSNRLTPSQFESTMRTDLLVQQAREGLAALAYLPEPISKQTL 180 Query: 150 ----------------NDFMLKYGNLEMEIPANKQKMKNITV------------------ 175 DF+ + E +I A + K+ Sbjct: 181 ATEHQQREVTIAEIKTADFLDQVKVDEAQIKAYYDQHKDKFKVPEQVKLEFVLFSSNNLI 240 Query: 176 ----------------------REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 R I Q+ K AEE ++ Sbjct: 241 PKVQVSDEEVKKYYDENAAKFQGNEQRRASHILISFGVSATTEAKQQAKKQAEEVLAQVR 300 Query: 214 KDCNKLEKFASKI-----HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGV 267 + ++ A K G + F++ + +N ++ G Sbjct: 301 QHPDQFADLAKKYSKDPGSAEKGGDLGSFGRGMMVKPFEDAVFSMKPGEISNLVESEFGY 360 Query: 268 EYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKHEAE 303 I + + G A K + A+ K AE Sbjct: 361 HIIKLTEITGQSQGFDAAKPQIKAELLYQKAIALFAE 397 Score = 36.2 bits (81), Expect = 7.1, Method: Composition-based stats. Identities = 23/215 (10%), Positives = 53/215 (24%), Gaps = 12/215 (5%) Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 N + + S G + K+D ++ E + + Sbjct: 403 NNMVYEQSTSLKPVADAFGLQVQHTDWISHADGAKYFKSDKLMNMVFAEEVLKDKRNTEA 462 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 LI + ++ V+ I+ ++ L K E + + Sbjct: 463 VEVSPNNLISARVVDYKPAAPRSYEEVKAGIEGVLKAELAAKLAIKKGEAALADLRQGKS 522 Query: 232 GKAQYLLESDLH------------PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + ++ + + + KG I + L Sbjct: 523 PQLDWIPPVTIDRSNAQGLTDVAMNNAFKIDVSKLPAYAGVADSNKGYLLIKVNGVNTLP 582 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ A YVK L+ + I Sbjct: 583 ANEDADKASARELQAALASEYVAAYVKSLKDKSKI 617 >gi|261245325|emb|CBG23113.1| survival protein SurA precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] Length = 428 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 105/311 (33%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ + Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ A +++ + I + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDASTELNLSHILIALPEN 186 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + AE + +++ + G+ + +L F Sbjct: 187 PTSEQVNDAQRQAESIVEEARNSADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R + ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMNDQQARLK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEEI--AADIK 315 Score = 82.8 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 90/287 (31%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q + L + E S D+ Sbjct: 143 NNEVRRRITV--LPQEVDALAKQIGTQNDASTELN-LSHILIALPENPTSEQVNDAQRQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V+ ARN+ + ++ Q + IQ + + Sbjct: 200 ESIVEEARNSADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + ++I+V E R +L +Q K + A + + Sbjct: 260 RSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMN-DQQARLKLEEIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270 ++++ G + P F++ L K + P + G I Sbjct: 319 TTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R + + A K K + A ++++ R++A + Sbjct: 379 ELLDTRKVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKI 425 >gi|320668802|gb|EFX35597.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. LSU-61] Length = 428 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 91/287 (31%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTHLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|254451174|ref|ZP_05064611.1| foldase protein PrsA [Octadecabacter antarcticus 238] gi|198265580|gb|EDY89850.1| foldase protein PrsA [Octadecabacter antarcticus 238] Length = 284 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 28/302 (9%), Positives = 75/302 (24%), Gaps = 45/302 (14%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 KLL + + + + + ++NG IT G + + L Q + Sbjct: 6 KLLASAALFTFTASFAYGDAHTDMTAETVVASVNGSDITLGQLVMLRSQLPEQYQQLA-D 64 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + LI + + + + G++ + Sbjct: 65 DVVFNGLIEQ------------LVNQQLLGDTLEVEPKRVGIAIANE------------- 99 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + + + + ++ + ++ N Sbjct: 100 ----------VRSLRAGEVVNTFTSAPVDEADLQATYDARFAD------IVPEAEYNASH 143 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KK 252 ++ + + ++ S G + + P F+ + Sbjct: 144 ILVETEEEAIEIGTMIDDGADFAETAVEKSTGPSGPSGGDLGWFGLGMMVPAFEEAVLTL 203 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + P TQ G + + + R+ L + T ++ + L A Sbjct: 204 DAGEVSAPVQTQFGWHIVKLNETRETPL--PTLDGLRVELTTGIQQQGLDALITTLTETA 261 Query: 313 II 314 I Sbjct: 262 DI 263 >gi|323975779|gb|EGB70875.1| ppic-type ppiase domain-containing protein [Escherichia coli TW10509] Length = 428 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSVPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|320182962|gb|EFW57830.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella flexneri CDC 796-83] Length = 428 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGDDFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGDDFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|194429871|ref|ZP_03062383.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli B171] gi|194412090|gb|EDX28400.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli B171] Length = 428 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWSRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWSRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|300939470|ref|ZP_07154132.1| PPIC-type PPIASE domain protein [Escherichia coli MS 21-1] gi|300455691|gb|EFK19184.1| PPIC-type PPIASE domain protein [Escherichia coli MS 21-1] Length = 428 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 106/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARTIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RTIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|323964847|gb|EGB60314.1| ppic-type ppiase domain-containing protein [Escherichia coli M863] gi|327255033|gb|EGE66636.1| chaperone surA [Escherichia coli STEC_7v] Length = 428 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQYDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 60/168 (35%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 259 IRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSG 317 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269 ++F+ G + P F++ + ++ + P + G Sbjct: 318 KTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R++ + A K K + A ++++ R++A + Sbjct: 378 IELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|296135908|ref|YP_003643150.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomonas intermedia K12] gi|295796030|gb|ADG30820.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomonas intermedia K12] Length = 262 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 96/306 (31%), Gaps = 52/306 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG---DISKRIALLKLQKINGE 71 +L +L + + + WA + T+NG+ I ++ +A + Q + + Sbjct: 1 MLKLSRILAVAALSCAFAAPVWAQN---IATVNGKPIPQSLADSVANSMAKQQGQAVTPQ 57 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L+++ ELI + QE +K G+ ++ + Sbjct: 58 LKEMVKNELISREVMVQEADKLGLDKETAVQDEI-------------------------- 91 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 +A Q+I + N ++ K+ E +I A K + Sbjct: 92 -----RIARQNILIRALFNAYLQKHPITEAQIKAEYDKFVKSFGSTEYKAQHILVPS--- 143 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL 250 +K +D + K +K++ + G + ++ P F L Sbjct: 144 -------EKEAQDIIAQLKKGAKFSELAKKYSKDTGSAANGGDLGWSTPNNYVPPFAKAL 196 Query: 251 KK-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + T P +Q G I + R L Q + +Y +L Sbjct: 197 EALKPGQYTQTPVQSQFGWHVIKLDATRPAKA--PTLDQLKPQIQAELQRQEVTKYQDEL 254 Query: 309 RSNAII 314 R+ A I Sbjct: 255 RAKAKI 260 >gi|15799738|ref|NP_285750.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 EDL933] gi|15829312|ref|NP_308085.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. Sakai] gi|16128047|ref|NP_414595.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli str. K-12 substr. MG1655] gi|24111499|ref|NP_706009.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella flexneri 2a str. 301] gi|26245979|ref|NP_752018.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli CFT073] gi|30061620|ref|NP_835791.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella flexneri 2a str. 2457T] gi|74310672|ref|YP_309091.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella sonnei Ss046] gi|82542659|ref|YP_406606.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella boydii Sb227] gi|89106937|ref|AP_000717.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli str. K-12 substr. W3110] gi|91209115|ref|YP_539101.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli UTI89] gi|110804119|ref|YP_687639.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella flexneri 5 str. 8401] gi|117622343|ref|YP_851256.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli APEC O1] gi|157155530|ref|YP_001461225.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli E24377A] gi|168751687|ref|ZP_02776709.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4113] gi|168756884|ref|ZP_02781891.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4401] gi|168762820|ref|ZP_02787827.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4501] gi|168766748|ref|ZP_02791755.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4486] gi|168776976|ref|ZP_02801983.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4196] gi|168781757|ref|ZP_02806764.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4076] gi|168785111|ref|ZP_02810118.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC869] gi|170021589|ref|YP_001726543.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli ATCC 8739] gi|170079716|ref|YP_001729036.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli str. K-12 substr. DH10B] gi|170682162|ref|YP_001742174.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli SMS-3-5] gi|188493538|ref|ZP_03000808.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli 53638] gi|191169148|ref|ZP_03030907.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli B7A] gi|191174100|ref|ZP_03035614.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli F11] gi|193066223|ref|ZP_03047276.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli E22] gi|193070992|ref|ZP_03051921.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli E110019] gi|194434546|ref|ZP_03066804.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Shigella dysenteriae 1012] gi|194439697|ref|ZP_03071767.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli 101-1] gi|195937729|ref|ZP_03083111.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4024] gi|208807378|ref|ZP_03249715.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4206] gi|208812243|ref|ZP_03253572.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4045] gi|208818190|ref|ZP_03258510.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4042] gi|209398433|ref|YP_002268663.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4115] gi|209917245|ref|YP_002291329.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli SE11] gi|215485217|ref|YP_002327648.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O127:H6 str. E2348/69] gi|217325032|ref|ZP_03441116.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. TW14588] gi|218552638|ref|YP_002385551.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli IAI1] gi|218556994|ref|YP_002389907.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli S88] gi|218687931|ref|YP_002396143.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli ED1a] gi|218693525|ref|YP_002401192.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli 55989] gi|218698475|ref|YP_002406104.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli IAI39] gi|218703314|ref|YP_002410833.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli UMN026] gi|227885046|ref|ZP_04002851.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli 83972] gi|238899458|ref|YP_002925254.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli BW2952] gi|253774915|ref|YP_003037746.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254037470|ref|ZP_04871547.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|254160178|ref|YP_003043286.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli B str. REL606] gi|254791192|ref|YP_003076029.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. TW14359] gi|256020107|ref|ZP_05433972.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella sp. D9] gi|256025370|ref|ZP_05439235.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia sp. 4_1_40B] gi|260842290|ref|YP_003220068.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O103:H2 str. 12009] gi|260853267|ref|YP_003227158.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O26:H11 str. 11368] gi|260866207|ref|YP_003232609.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O111:H- str. 11128] gi|261226813|ref|ZP_05941094.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli O157:H7 str. FRIK2000] gi|261255216|ref|ZP_05947749.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O157:H7 str. FRIK966] gi|291280879|ref|YP_003497697.1| Chaperone surA precursor [Escherichia coli O55:H7 str. CB9615] gi|293403128|ref|ZP_06647225.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli FVEC1412] gi|293408148|ref|ZP_06651988.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli B354] gi|293417931|ref|ZP_06660553.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli B185] gi|293476717|ref|ZP_06665125.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli B088] gi|297516939|ref|ZP_06935325.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli OP50] gi|298378656|ref|ZP_06988540.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli FVEC1302] gi|300900923|ref|ZP_07119058.1| PPIC-type PPIASE domain protein [Escherichia coli MS 198-1] gi|300919606|ref|ZP_07136098.1| PPIC-type PPIASE domain protein [Escherichia coli MS 115-1] gi|300928648|ref|ZP_07144167.1| PPIC-type PPIASE domain protein [Escherichia coli MS 187-1] gi|300948657|ref|ZP_07162741.1| PPIC-type PPIASE domain protein [Escherichia coli MS 116-1] gi|300956983|ref|ZP_07169235.1| PPIC-type PPIASE domain protein [Escherichia coli MS 175-1] gi|300981029|ref|ZP_07175306.1| PPIC-type PPIASE domain protein [Escherichia coli MS 45-1] gi|300984196|ref|ZP_07176924.1| PPIC-type PPIASE domain protein [Escherichia coli MS 200-1] gi|301024798|ref|ZP_07188436.1| PPIC-type PPIASE domain protein [Escherichia coli MS 196-1] gi|301048439|ref|ZP_07195466.1| PPIC-type PPIASE domain protein [Escherichia coli MS 185-1] gi|301648380|ref|ZP_07248116.1| PPIC-type PPIASE domain protein [Escherichia coli MS 146-1] gi|306815347|ref|ZP_07449496.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli NC101] gi|307136656|ref|ZP_07496012.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli H736] gi|307311493|ref|ZP_07591135.1| Peptidylprolyl isomerase [Escherichia coli W] gi|309796042|ref|ZP_07690454.1| PPIC-type PPIASE domain protein [Escherichia coli MS 145-7] gi|312966176|ref|ZP_07780402.1| chaperone surA [Escherichia coli 2362-75] gi|312970148|ref|ZP_07784330.1| chaperone surA [Escherichia coli 1827-70] gi|331640505|ref|ZP_08341653.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Escherichia coli H736] gi|331645163|ref|ZP_08346274.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Escherichia coli M605] gi|331661095|ref|ZP_08362027.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Escherichia coli TA206] gi|331671573|ref|ZP_08372371.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Escherichia coli TA280] gi|331681439|ref|ZP_08382076.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Escherichia coli H299] gi|332281260|ref|ZP_08393673.1| survival protein surA [Shigella sp. D9] gi|81174735|sp|P0ABZ8|SURA_ECO57 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|81174736|sp|P0ABZ7|SURA_ECOL6 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|81174737|sp|P0ABZ6|SURA_ECOLI RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; AltName: Full=Survival protein A; Flags: Precursor gi|81174738|sp|P0ABZ9|SURA_SHIFL RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|121956477|sp|Q326I0|SURA_SHIBS RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|121956482|sp|Q3Z5V6|SURA_SHISS RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|122070645|sp|Q1RGE4|SURA_ECOUT RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|12512748|gb|AAG54358.1|AE005182_7 survival protein [Escherichia coli O157:H7 str. EDL933] gi|26106376|gb|AAN78562.1|AE016755_62 Survival protein surA precursor [Escherichia coli CFT073] gi|1786238|gb|AAC73164.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli str. K-12 substr. MG1655] gi|13359514|dbj|BAB33481.1| survival protein [Escherichia coli O157:H7 str. Sakai] gi|24050252|gb|AAN41716.1| survival protein [Shigella flexneri 2a str. 301] gi|30039862|gb|AAP15596.1| survival protein [Shigella flexneri 2a str. 2457T] gi|73854149|gb|AAZ86856.1| survival protein [Shigella sonnei Ss046] gi|81244070|gb|ABB64778.1| survival protein [Shigella boydii Sb227] gi|85674304|dbj|BAB96620.2| peptidyl-prolyl cis-trans isomerase [Escherichia coli str. K12 substr. W3110] gi|91070689|gb|ABE05570.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli UTI89] gi|110613667|gb|ABF02334.1| survival protein [Shigella flexneri 5 str. 8401] gi|115511467|gb|ABI99541.1| survival protein [Escherichia coli APEC O1] gi|157077560|gb|ABV17268.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli E24377A] gi|169756517|gb|ACA79216.1| SurA domain [Escherichia coli ATCC 8739] gi|169887551|gb|ACB01258.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli str. K-12 substr. DH10B] gi|170519880|gb|ACB18058.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli SMS-3-5] gi|187767718|gb|EDU31562.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4196] gi|188014319|gb|EDU52441.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4113] gi|188488737|gb|EDU63840.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli 53638] gi|189000667|gb|EDU69653.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4076] gi|189356117|gb|EDU74536.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4401] gi|189363909|gb|EDU82328.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4486] gi|189366936|gb|EDU85352.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4501] gi|189375016|gb|EDU93432.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC869] gi|190900823|gb|EDV60613.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli B7A] gi|190905594|gb|EDV65219.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli F11] gi|192926148|gb|EDV80789.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli E22] gi|192955722|gb|EDV86196.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli E110019] gi|194417199|gb|EDX33310.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Shigella dysenteriae 1012] gi|194421382|gb|EDX37399.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli 101-1] gi|208727179|gb|EDZ76780.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4206] gi|208733520|gb|EDZ82207.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4045] gi|208738313|gb|EDZ85995.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4042] gi|209159833|gb|ACI37266.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC4115] gi|209746874|gb|ACI71744.1| survival protein [Escherichia coli] gi|209746876|gb|ACI71745.1| survival protein [Escherichia coli] gi|209746878|gb|ACI71746.1| survival protein [Escherichia coli] gi|209746880|gb|ACI71747.1| survival protein [Escherichia coli] gi|209746882|gb|ACI71748.1| survival protein [Escherichia coli] gi|209910504|dbj|BAG75578.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli SE11] gi|215263289|emb|CAS07604.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli O127:H6 str. E2348/69] gi|217321253|gb|EEC29677.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. TW14588] gi|218350257|emb|CAU95940.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli 55989] gi|218359406|emb|CAQ96945.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli IAI1] gi|218363763|emb|CAR01424.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli S88] gi|218368461|emb|CAR16197.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli IAI39] gi|218425495|emb|CAR06277.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli ED1a] gi|218430411|emb|CAR11278.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli UMN026] gi|222031887|emb|CAP74625.1| chaperone surA [Escherichia coli LF82] gi|226840576|gb|EEH72578.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|227837875|gb|EEJ48341.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli 83972] gi|238861990|gb|ACR63988.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli BW2952] gi|242375892|emb|CAQ30573.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli BL21(DE3)] gi|253325959|gb|ACT30561.1| Peptidylprolyl isomerase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972079|gb|ACT37750.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli B str. REL606] gi|253976288|gb|ACT41958.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli BL21(DE3)] gi|254590592|gb|ACT69953.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli O157:H7 str. TW14359] gi|257751916|dbj|BAI23418.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O26:H11 str. 11368] gi|257757437|dbj|BAI28934.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O103:H2 str. 12009] gi|257762563|dbj|BAI34058.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O111:H- str. 11128] gi|260450738|gb|ACX41160.1| SurA domain protein [Escherichia coli DH1] gi|281177270|dbj|BAI53600.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli SE15] gi|281599414|gb|ADA72398.1| Chaperone surA precursor [Shigella flexneri 2002017] gi|284919836|emb|CBG32891.1| chaperone precursor (peptidyl-prolyl cis-trans isomerase) [Escherichia coli 042] gi|290760752|gb|ADD54713.1| Chaperone surA precursor [Escherichia coli O55:H7 str. CB9615] gi|291321170|gb|EFE60612.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli B088] gi|291430043|gb|EFF03057.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli FVEC1412] gi|291430649|gb|EFF03647.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli B185] gi|291472399|gb|EFF14881.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli B354] gi|294492943|gb|ADE91699.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli IHE3034] gi|298280990|gb|EFI22491.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli FVEC1302] gi|299880288|gb|EFI88499.1| PPIC-type PPIASE domain protein [Escherichia coli MS 196-1] gi|300299732|gb|EFJ56117.1| PPIC-type PPIASE domain protein [Escherichia coli MS 185-1] gi|300306726|gb|EFJ61246.1| PPIC-type PPIASE domain protein [Escherichia coli MS 200-1] gi|300316273|gb|EFJ66057.1| PPIC-type PPIASE domain protein [Escherichia coli MS 175-1] gi|300355586|gb|EFJ71456.1| PPIC-type PPIASE domain protein [Escherichia coli MS 198-1] gi|300409065|gb|EFJ92603.1| PPIC-type PPIASE domain protein [Escherichia coli MS 45-1] gi|300413352|gb|EFJ96662.1| PPIC-type PPIASE domain protein [Escherichia coli MS 115-1] gi|300451883|gb|EFK15503.1| PPIC-type PPIASE domain protein [Escherichia coli MS 116-1] gi|300463317|gb|EFK26810.1| PPIC-type PPIASE domain protein [Escherichia coli MS 187-1] gi|301073515|gb|EFK88321.1| PPIC-type PPIASE domain protein [Escherichia coli MS 146-1] gi|305851009|gb|EFM51464.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli NC101] gi|306908472|gb|EFN38970.1| Peptidylprolyl isomerase [Escherichia coli W] gi|307551900|gb|ADN44675.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli ABU 83972] gi|307629629|gb|ADN73933.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli UM146] gi|308120284|gb|EFO57546.1| PPIC-type PPIASE domain protein [Escherichia coli MS 145-7] gi|309700266|emb|CBI99554.1| chaperone precursor (peptidyl-prolyl cis-trans isomerase) [Escherichia coli ETEC H10407] gi|310337646|gb|EFQ02757.1| chaperone surA [Escherichia coli 1827-70] gi|312289419|gb|EFR17313.1| chaperone surA [Escherichia coli 2362-75] gi|312944661|gb|ADR25488.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O83:H1 str. NRG 857C] gi|313646568|gb|EFS11029.1| chaperone surA [Shigella flexneri 2a str. 2457T] gi|315059279|gb|ADT73606.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli W] gi|315134749|dbj|BAJ41908.1| chaperone surA precursor [Escherichia coli DH1] gi|315285117|gb|EFU44562.1| PPIC-type PPIASE domain protein [Escherichia coli MS 110-3] gi|315298427|gb|EFU57682.1| PPIC-type PPIASE domain protein [Escherichia coli MS 16-3] gi|315616170|gb|EFU96789.1| chaperone surA [Escherichia coli 3431] gi|320190424|gb|EFW65074.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. EC1212] gi|320197500|gb|EFW72114.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli WV_060327] gi|320200427|gb|EFW75013.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli EC4100B] gi|320647458|gb|EFX16253.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H- str. 493-89] gi|320652792|gb|EFX21030.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H- str. H 2687] gi|320658181|gb|EFX25910.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663490|gb|EFX30774.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O55:H7 str. USDA 5905] gi|323166105|gb|EFZ51884.1| chaperone surA [Shigella sonnei 53G] gi|323171213|gb|EFZ56861.1| chaperone surA [Escherichia coli LT-68] gi|323176362|gb|EFZ61954.1| chaperone surA [Escherichia coli 1180] gi|323181750|gb|EFZ67163.1| chaperone surA [Escherichia coli 1357] gi|323190264|gb|EFZ75540.1| chaperone surA [Escherichia coli RN587/1] gi|323380164|gb|ADX52432.1| SurA domain protein [Escherichia coli KO11] gi|323935106|gb|EGB31473.1| ppic-type ppiase domain-containing protein [Escherichia coli E1520] gi|323939725|gb|EGB35927.1| ppic-type ppiase domain-containing protein [Escherichia coli E482] gi|323945684|gb|EGB41732.1| ppic-type ppiase domain-containing protein [Escherichia coli H120] gi|323950947|gb|EGB46824.1| ppic-type ppiase domain-containing protein [Escherichia coli H252] gi|323955251|gb|EGB51024.1| ppic-type ppiase domain-containing protein [Escherichia coli H263] gi|323960002|gb|EGB55648.1| ppic-type ppiase domain-containing protein [Escherichia coli H489] gi|323970727|gb|EGB65981.1| ppic-type ppiase domain-containing protein [Escherichia coli TA007] gi|324008401|gb|EGB77620.1| PPIC-type PPIASE domain protein [Escherichia coli MS 57-2] gi|324012311|gb|EGB81530.1| PPIC-type PPIASE domain protein [Escherichia coli MS 60-1] gi|324017678|gb|EGB86897.1| PPIC-type PPIASE domain protein [Escherichia coli MS 117-3] gi|324118405|gb|EGC12299.1| ppic-type ppiase domain-containing protein [Escherichia coli E1167] gi|326345227|gb|EGD68970.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. 1125] gi|326346920|gb|EGD70654.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. 1044] gi|331040251|gb|EGI12458.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Escherichia coli H736] gi|331045920|gb|EGI18039.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Escherichia coli M605] gi|331052137|gb|EGI24176.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Escherichia coli TA206] gi|331071418|gb|EGI42775.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Escherichia coli TA280] gi|331081660|gb|EGI52821.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Escherichia coli H299] gi|332097929|gb|EGJ02902.1| chaperone surA [Shigella dysenteriae 155-74] gi|332098944|gb|EGJ03895.1| chaperone surA [Shigella boydii 3594-74] gi|332103612|gb|EGJ06958.1| survival protein surA [Shigella sp. D9] gi|332341385|gb|AEE54719.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli UMNK88] gi|332762289|gb|EGJ92556.1| chaperone surA [Shigella flexneri 2747-71] gi|332762614|gb|EGJ92879.1| chaperone surA [Shigella flexneri 4343-70] gi|332764896|gb|EGJ95124.1| chaperone surA [Shigella flexneri K-671] gi|332768842|gb|EGJ99021.1| peptidyl-prolyl cis-trans isomerase [Shigella flexneri 2930-71] gi|333009456|gb|EGK28912.1| chaperone surA [Shigella flexneri K-218] gi|333011437|gb|EGK30851.1| chaperone surA [Shigella flexneri K-272] gi|333021676|gb|EGK40925.1| chaperone surA [Shigella flexneri K-227] gi|333022418|gb|EGK41656.1| chaperone surA [Shigella flexneri K-304] Length = 428 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|269138352|ref|YP_003295052.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Edwardsiella tarda EIB202] gi|267984012|gb|ACY83841.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Edwardsiella tarda EIB202] gi|304558384|gb|ADM41048.1| Peptidyl-prolyl cis-trans isomerase PpiD [Edwardsiella tarda FL6-60] Length = 626 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 32/399 (8%), Positives = 104/399 (26%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + + ++I F + + +Y ++G+ I + + + Sbjct: 1 MMDNLRAAANHVVLKVILALIIISFVLTGVGNYLIGGSGDY-AAKVDGQEIGRAQLEQAV 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + EL K + +I + L Q +K + V Sbjct: 60 QNERSRLQQQLGDQFSVLAGNEGYMKELRKQVLSRMIDDVLLDQYAQKLNLAISDAQVKE 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + + + + G+ + + Q + Q + +++ Sbjct: 120 AIRAMPYFQTDNHFDNAKYLDMVARLGLSPDAYAQLMRQQLVTQQLIQGFTATGFTLPAE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI- 187 + M + + E+ Q+ ++ + ++ + Sbjct: 180 VDALAALTMQQRQVSLATIDISKLMPQQQVSDAELQGYYQQHQSSFIAPEAVKVRYIEMD 239 Query: 188 ------------------------------PDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + Q + K Sbjct: 240 AAAINDKMTVSDAEISAYYDQHKGSFTQPARSDYSVIQVKTEAEAKAIAAQLANGADFAT 299 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ I + G+ +L + + + + + P + G + + D + Sbjct: 300 LAKEKSTDIISRKNGGELGWLEPETTPDEIRAAKLSHKGDVSAPIASSVGYLIVRLNDMQ 359 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++A ++ + K +K+ A Sbjct: 360 PAVVKPLSEVRAEIADKVKQQKALDAFYALQQKVSDAAT 398 >gi|313201268|ref|YP_004039926.1| ppic-type peptidyl-prolyl cis-trans isomerase [Methylovorus sp. MP688] gi|312440584|gb|ADQ84690.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylovorus sp. MP688] Length = 632 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 54/397 (13%), Positives = 104/397 (26%), Gaps = 94/397 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + ++ L V I F IV I +Y A SS ++GE I+ + + + Sbjct: 1 MLEAIRERSKSWLAKLILAAVTIPFAIVGIDTYLRDAGSSVSIAKVDGESISVQEYNNSM 60 Query: 61 ALLKLQKI-----------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--- 106 L+ Q ++++ + LI+ L + KS ++ Sbjct: 61 QRLRNQLQAEGKTDPSVLEQPDVKQSILDRLIINRLLNNAVTKSHFAIGDAALSDHIITL 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------------- 149 + N S E + L + + F+ + + + Sbjct: 121 PEFQENGKFSQETYDRLLTSNRLTPSQFESTMRTDLLVQQAREGLAALAYLPEPISKQTL 180 Query: 150 ----------------NDFMLKYGNLEMEIPANKQKMKNITV------------------ 175 DF+ + E +I A + K+ Sbjct: 181 ATEHQQREVTIAEIKTADFLDQVKVDEAQIKAYYDQHKDKFKVPEQVKLEFVLFSSNNLI 240 Query: 176 ----------------------REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 R I Q+ K AEE ++ Sbjct: 241 PKVQVSDEEVKKYYDENAAKFQGNEQRRASHILISFGVSATAEAKQQAKKQAEEVLAQVR 300 Query: 214 KDCNKLEKFASKI-----HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGV 267 + ++ A K G + F++ + +N ++ G Sbjct: 301 QHPDQFADLAKKYSKDPGSAEKGGDLGSFGRGMMVKPFEDAVFSMKPGEISNLVESEFGY 360 Query: 268 EYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKHEAE 303 I + + G A K + A+ K AE Sbjct: 361 HIIKLTEITGQSQGFDAAKPQIKAELLYQKAIALFAE 397 Score = 36.2 bits (81), Expect = 6.2, Method: Composition-based stats. Identities = 21/215 (9%), Positives = 51/215 (23%), Gaps = 12/215 (5%) Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 N + + S G + K+D ++ E + + Sbjct: 403 NNMVYEQSTSLKPVADAFGLQVQHTDWISHADGAKYFKSDKLMNMVFAEEVLKDKRNTEA 462 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 LI + ++ V+ I+ ++ K E + + Sbjct: 463 VEVSPNNLISARVVDYKPAAPRSYEEVKAGIEGVLKAEQAAKLAIKKGEAALADLRQGKS 522 Query: 232 GKAQYLLESDLH------------PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + ++ + + + KG I + Sbjct: 523 PQLDWIPPVTIDRSNAQGLTDVAMNNAFKIDVSKLPAYAGVADSNKGYLLIKVNGVNTPP 582 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ A YVK L+ + I Sbjct: 583 ANEDTDKASARELQAALASEYVAAYVKSLKDKSKI 617 >gi|126739402|ref|ZP_01755095.1| PPIC-type PPIASE domain [Roseobacter sp. SK209-2-6] gi|126719502|gb|EBA16211.1| PPIC-type PPIASE domain [Roseobacter sp. SK209-2-6] Length = 426 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 102/276 (36%), Gaps = 7/276 (2%) Query: 5 VFTSLSDF-IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63 + ++ F + + + T++ VIT+ ++ +R + Sbjct: 14 IRHAMHKFSVSARLLGAAFALTFGLGFAPSLEAQSLFAPAITVDSAVITNYELDQRERFM 73 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 L + G++ + A +ELI + LK +++ GI D + + A LS E+F Sbjct: 74 ALLRTPGDIAEKAREELIDDRLKLAILDEFGIEVDDEEIKQGMTELAGRANLSLEEFLGV 133 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 L + GI + + W + + ++ + E EI + + V+ L + Sbjct: 134 LRQNGIAPETVRDLTRVGISWRNFLGARYLSQARPTEEEIDRAMGQAGSGGVQVLLSELI 193 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 + N Q + F+Q+ + ++++ + G+ ++ + L Sbjct: 194 VPINEQNASQVEQFIQQVG-----KLKSYDAFSSAATQYSAADSRNNGGRLPWMNLTKLP 248 Query: 244 PQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDL 278 PQ Q ++ + T P Q V + R++ Sbjct: 249 PQLQAVVLELDLGEITEPVPLQGAVALFQMRGLREI 284 Score = 39.7 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 21/46 (45%) Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + +C + GE + ++ T +I + + +LR++A I Sbjct: 378 LLMLCGRTAELGEGQSRETVANALTQQRINSYSQSLLNQLRADARI 423 >gi|255524040|ref|ZP_05391002.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium carboxidivorans P7] gi|296186897|ref|ZP_06855298.1| PPIC-type PPIASE domain protein [Clostridium carboxidivorans P7] gi|255512327|gb|EET88605.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium carboxidivorans P7] gi|296048611|gb|EFG88044.1| PPIC-type PPIASE domain protein [Clostridium carboxidivorans P7] Length = 341 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 31/333 (9%), Positives = 94/333 (28%), Gaps = 24/333 (7%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 S+ + + +++ A+ + + T+NGE IT G++ L+ + Sbjct: 1 MKSVKKLVSAVLISAFAFSTVGCNMIAKTPEAIKNSVVATVNGEKITRGELDSNPNLMGV 60 Query: 66 QKINGE------------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + + + +I + +Q+ ++ + D + Sbjct: 61 VAQIKQQYGEDYEKNDDAKSILKEQKAQVLDTMIEAKVIEQKAKELKVLPDDAKLKAEVD 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + N + + + + + + + + + N + Sbjct: 121 KQISNIKQQQFGNDATKFQAALKQQNLTEETLKNMYYTQMKNQETVTNVTNNVGKDVKVD 180 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-I 226 K + + + + K + + ++ ++ Sbjct: 181 DKSIQDYYKNNPYKFTEKPDRIHTAHILVKTEDEAKKVKARLDKGEDFAKVAKEVSTDTA 240 Query: 227 HDVSIGKAQYLL---ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-- 281 G ++ + + + P +Q G I +K + + Sbjct: 241 TKDKGGDLGFVNYVDSGFDAAFMAGAIALKKGAVSAPVKSQFGYHIIKCIEKEEYPVKKI 300 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 A+KA + Q + +K + V + + +A I Sbjct: 301 DAVKAQIKTQLETEQKQKKYQDKVAEWKKSAKI 333 >gi|254468048|ref|ZP_05081454.1| chaperone SurA, putative [beta proteobacterium KB13] gi|207086858|gb|EDZ64141.1| chaperone SurA, putative [beta proteobacterium KB13] Length = 428 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 101/291 (34%), Gaps = 14/291 (4%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----ISKRIALLK 64 ++ IK++ +L+ F V S+ RI +N +VIT D + K + + Sbjct: 2 INYLIKIIFFLCLLVNFSFVS-----SYQELDRIVAIVNKDVITHNDLTEGVDKALLFFQ 56 Query: 65 LQK----INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 +EK + ELI + + + E I ++ ++ ++ Sbjct: 57 QNSIEPPEESIIEKKVLDELIEQKIIEGYAEDWNIKASQEDIDSLIQNILSANQITLDEL 116 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 S L +QG + + L+ + I V + K E EI +K+KM I + + Sbjct: 117 KSNLKQQGSSYDKLLKSLSYEIILKKVKNREISSKLNISEYEIKKHKEKMAKIRPDVFDL 176 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 +L + ++++ + +L+ +F+ G L +S Sbjct: 177 SHILIKFSSEPTAEEKKEKRKLGEEIFDKLKTDDFAKIAYEFSDSPDANEGGSLGKLKQS 236 Query: 241 DLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 +L F L S + P+ + G+ I I + Sbjct: 237 ELPEIFIDKLNNLSAGEYSTPFESNNGIHIIKINQVESYSESKNSSQKIKK 287 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 54/148 (36%), Gaps = 2/148 (1%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 KN + + + +++ ++ V K++K + +K++ + Sbjct: 279 KNSSQKIKKYFIKHIVLKTSEVASEDDVIKKLKRYKNEIDSGADFSVIAKKYSEDFSAAN 338 Query: 231 IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYL 288 G+ ++ E L +F + L QN + P+ T G I D + + + + Sbjct: 339 GGEIGWINEGLLDQEFDKQLSIIDQNEVSQPFKTDLGWHIIQYTDSKFEDLASENIDNKI 398 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + E ++ L+S + I Sbjct: 399 KYELINERTELLYQDWFSALKSESFIEI 426 >gi|190893605|ref|YP_001980147.1| peptidyl-prolyl cis-trans isomerase D signal peptide protein [Rhizobium etli CIAT 652] gi|190698884|gb|ACE92969.1| peptidyl-prolyl cis-trans isomerase D signal peptide protein [Rhizobium etli CIAT 652] gi|327193395|gb|EGE60295.1| peptidyl-prolyl cis-trans isomerase D signal peptide protein [Rhizobium etli CNPAF512] Length = 293 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 33/301 (10%), Positives = 80/301 (26%), Gaps = 49/301 (16%) Query: 22 LIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRIALL---KLQKINGELEKIAV 77 + V++++ A + + I ++ +A L Q + + + A+ Sbjct: 7 FALLAFATFVAFQAPAHAEDAVVAKVGNLEIHQSELDLAVANLDPQLAQLPDDQKKVAAL 66 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 I L + + QY Sbjct: 67 SAAIDVKLLAADAIAEKLDQTDEFKKR------------------------------MQY 96 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 L+ + + K + E++ +K+ E R +L Sbjct: 97 LSDRELHNAYFKKHVVDTVTPDEVKARYDKEVAALPKQEEVHARHIL-----------VK 145 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256 + K+ + ++ ++ + G Y + +F++ + Sbjct: 146 TEDEAKEIIKQLDAGKDFAELAKEKSTDPNKSEGGDLGYFSRGRMVKEFEDAAFALEKGA 205 Query: 257 TTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + DKRD + Q + + + +++A I Sbjct: 206 YSKTPVKTDFGYHVIKVEDKRDAPP--PPFDQVQDQVRQLVMRDKYLALLNQAKTSAKIE 263 Query: 316 Y 316 Sbjct: 264 I 264 >gi|192358925|ref|YP_001981367.1| peptidyl-prolyl cis-trans isomerase SurA [Cellvibrio japonicus Ueda107] gi|190685090|gb|ACE82768.1| peptidyl-prolyl cis-trans isomerase SurA [Cellvibrio japonicus Ueda107] Length = 437 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 40/318 (12%), Positives = 105/318 (33%), Gaps = 16/318 (5%) Query: 10 SDFIKLLTTYFVLIIFCIVP-IVSYKSWAMSSRIRTTINGEVITDGDISKRIALL----- 63 S +KL + + + + R+ ++ +V+ + ++++R A + Sbjct: 7 SGLVKLGKGMLLGSLLVYAGWLQAQPRTVELDRVVAIVDDDVVLESELNERKASIMERLQ 66 Query: 64 ---KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + L K +++LIVE ++ ++ I+ D ++ + A+ +SA Sbjct: 67 GQYQQLPPEDVLNKQILEQLIVERIELGLAKRYDISIDEAEIDQAIARIAQKNQVSAAAL 126 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + L +QG+ + ++ L + + + E +I Sbjct: 127 EADLKRQGLDMSGLREQLRKDLTINQLQQGVVNSRIKISEQDIDNFLASSDGKYATSPDY 186 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYL 237 I + + V++ A + + ++ + G + Sbjct: 187 HIGHILISVSSSADAEMVEQAENQANDIYKKLQGGADFAQMAISYSKDQAALQGGDIGWR 246 Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD---LGGEIALKAYLSAQNT 293 + L F N + K S + P+ + G + ++R E ++ + + Sbjct: 247 KLAQLPELFGNEMMKLSPGQVSKPFRSGAGFHILKNIEQRGGGAQMVEQTHARHILVKTS 306 Query: 294 PTKIEKHEAEYVKKLRSN 311 ++ E + LR Sbjct: 307 EIMDDRQAREKLLGLRER 324 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 27/280 (9%), Positives = 81/280 (28%), Gaps = 9/280 (3%) Query: 45 TINGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 +N + I++ DI +A + LI + +N + Sbjct: 157 VVNSRIKISEQDIDNFLASSDGKYATSPDYH-IGHILISVSSSADAEMVEQAENQANDIY 215 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----NDFMLKYGNL 159 A ++ QG K + +++K Sbjct: 216 KKLQGGADFAQMAISYSKDQAALQGGDIGWRKLAQLPELFGNEMMKLSPGQVSKPFRSGA 275 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 I N ++ + +++ + ++++ E L+ Sbjct: 276 GFHILKNIEQRGGGAQMVEQTHARHILVKTSEIMDDRQAREKLLGLRERILKGEDFAKLA 335 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRD 277 + + +S G + P F+ + ++ + + P+ +Q G + + ++R Sbjct: 336 RENSEDTGSMLSGGDLGWSTPGMFVPAFEEAMAQTGIGDISRPFKSQFGWHILQVLERRQ 395 Query: 278 LG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + + ++ ++ ++R A + Sbjct: 396 TDMSDRMKRNQAANVLRSRRFDEEFQLWLTQIREEAYVEI 435 >gi|320179614|gb|EFW54563.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella boydii ATCC 9905] Length = 428 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TAFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|27363507|ref|NP_759035.1| peptidyl-prolyl cis-trans isomerase ppiD [Vibrio vulnificus CMCP6] gi|27359623|gb|AAO08562.1| Peptidyl-prolyl cis-trans isomerase ppiD [Vibrio vulnificus CMCP6] Length = 619 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 42/406 (10%), Positives = 108/406 (26%), Gaps = 92/406 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY S+ + I G+ Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYLVSGSSNS-AAKVGNVEIGRGEFEMAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + K + +I + L Q E G+ V Sbjct: 60 QNERNRMQSQLGDYFSQLLADPAYVESFRKSVLDRMINDVLLDQHAESLGLRISDAQVRS 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + ++ + + + + L + G + F +Y+ + I ++ Sbjct: 120 MILAMPEFQQDGKFNQDVYQATLRRAGYSPDSFAEYMRRELIRSQLLDALQTSEFTLPGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 DF K E +I + K+ R ++ + Sbjct: 180 VDAEGKLFTQTRDVRTVTLNIRDFADKVTLTEEDIQKYYDENKSRFTRPEQVKVSYIELA 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 + L+ Q + Q + + + Sbjct: 240 ADSLKQQITISDDEVKQYYQEHLDKYSSEEQRRVAHILIEGDDQAKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G+ ++ + P F+ K+ + T + G I + Sbjct: 300 ATLAQEKSDDFGSADNGGELGWIERDVMDPAFEEAAFALKNVGDVTGLVKSDFGYHIIKL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++ + + A + + K E +L A Y Sbjct: 360 EELKEPVVKPFSDVAAQIKQEMIDQKAVDQFYELQSELEKVAF-EY 404 >gi|170768498|ref|ZP_02902951.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia albertii TW07627] gi|170122602|gb|EDS91533.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia albertii TW07627] Length = 428 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ A Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVEALAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVEALAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|320172859|gb|EFW48091.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella dysenteriae CDC 74-1112] Length = 428 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V ++ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNHEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 86/273 (31%), Gaps = 16/273 (5%) Query: 58 KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 + + L Q N + L + E S ++ + V ARN Sbjct: 155 QEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFG 213 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------FMLKYGNLEMEIPAN 166 + + Q + + IQ + + G +++ Sbjct: 214 KLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDL 273 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + + KNI+V E R +L Q V K + A + + ++F+ Sbjct: 274 RGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGKTTFAAAAKEFSQDP 332 Query: 227 -HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIA 283 G + P F++ + ++ + P + G I + D R++ + A Sbjct: 333 GSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAA 392 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K K + A ++++ R++A + Sbjct: 393 QKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|320156965|ref|YP_004189344.1| peptidyl-prolyl cis-trans isomerase ppiD [Vibrio vulnificus MO6-24/O] gi|319932277|gb|ADV87141.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio vulnificus MO6-24/O] Length = 619 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 42/406 (10%), Positives = 108/406 (26%), Gaps = 92/406 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY S+ + I G+ Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYLVSGSSNS-AAKVGNVEIGRGEFEMAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + K + +I + L Q E G+ V Sbjct: 60 QNERNRMQSQLGDYFSQLLADPAYVESFRKSVLDRMINDVLLDQHAESLGLRISDAQVRS 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + ++ + + + + L + G + F +Y+ + I ++ Sbjct: 120 MILAMPEFQQDGKFNQDVYQATLRRAGYSPDSFAEYMRRELIRSQLLDALQTSEFTLPGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 DF K E +I + K+ R ++ + Sbjct: 180 VDAEGKLFTQTRDVRTVTLNIRDFADKVTLTEEDIQKYYDENKSRFTRPEQVKVSYIELA 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 + L+ Q + Q + + + Sbjct: 240 ADSLKQQITISDDEVKQYYQEHLDKYSSEEQRRVAHILIEGDDQAKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G+ ++ + P F+ K+ + T + G I + Sbjct: 300 AALAQEKSDDFGSADNGGELGWIERDVMDPAFEEAAFALKNVGDVTGLVKSDFGYHIIKL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++ + + A + + K E +L A Y Sbjct: 360 EELKEPVVKPFSDVAAQIKQEMIDQKAVDQFYELQSELEKVAF-EY 404 >gi|312112916|ref|YP_004010512.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodomicrobium vannielii ATCC 17100] gi|311218045|gb|ADP69413.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodomicrobium vannielii ATCC 17100] Length = 283 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 38/297 (12%), Positives = 89/297 (29%), Gaps = 47/297 (15%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQEL 80 I ++++ + + +NG IT+ +I+ A + + ++ V+ L Sbjct: 5 ILLSAAVLAFGAQMAQAAPVARVNGTDITEAEIAFAEAEVGAEIAGLPAESRRRVLVEYL 64 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + L E K + + Y + Sbjct: 65 VEAHLFASEAAKDKLDAAKDFEERA------------------------------AYYKL 94 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 +++ + + + + ++Q K E R +L ++ Sbjct: 95 RALRDTFYEKKVRDAITDAQAKAAYDEQIAKLKPEPEVRARHIL-----------VKTKE 143 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 D + +K A + G Y + + F++ ++ Sbjct: 144 EAADLVKQLKGGADFNELAKKSADGPSANTGGDLGYFSKGQMVKVFEDTAFALQPGQISD 203 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P ++ G I + DKR+ + Q + ++ E V+KLRS+A + Sbjct: 204 PVQSEFGWHVIKVEDKRNRPV--PSFDEVKDQIVASLVQNQLRETVQKLRSSAKVEI 258 >gi|332095342|gb|EGJ00365.1| chaperone surA [Shigella boydii 5216-82] Length = 428 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNTAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHTRHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 83.2 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHTRHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|301019757|ref|ZP_07183903.1| PPIC-type PPIASE domain protein [Escherichia coli MS 69-1] gi|331661424|ref|ZP_08362348.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Escherichia coli TA143] gi|300399094|gb|EFJ82632.1| PPIC-type PPIASE domain protein [Escherichia coli MS 69-1] gi|331061339|gb|EGI33302.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Escherichia coli TA143] Length = 428 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVSNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVSNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|262164102|ref|ZP_06031841.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio mimicus VM223] gi|262027630|gb|EEY46296.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio mimicus VM223] Length = 388 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 29/260 (11%), Positives = 89/260 (34%), Gaps = 4/260 (1%) Query: 58 KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 + L + +++LI++TL++QE E+ G+ D N +N + A++ + Sbjct: 11 NAKQNNQPLPQETVLREQVLEKLIIDTLQQQEAERIGVKIDDNRLNDAIKEIAKSNQQTQ 70 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 E S + ++G+ F++ + + D + L E+ + + T Sbjct: 71 EQLISSVAQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDAT 130 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 + + + Q++ + ++ + G ++ Sbjct: 131 VQYKISHIQLRVEEGQDKSEAESLANKLVGELKHGADFAQMAYTYSKGPKALQGGDWGWM 190 Query: 238 LESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNT 293 + ++ F + +++ + P+ + G + I D + + ++ + T Sbjct: 191 RKEEMPTIFADQIKMQNKGSVIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPT 250 Query: 294 PTKIEKHEAEYVKKLRSNAI 313 ++ + + + Sbjct: 251 IILSDEGAQKQLNEFVQRIK 270 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 34/269 (12%), Positives = 82/269 (30%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + KI+ +L VE + + +S + + Sbjct: 111 ILPAEVDTLAELLAQETDATVQYKISHIQLRVEEGQDKSEAESLANKLVGELKHGADFAQ 170 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I Sbjct: 171 MAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSVIGPFRSGVGFHILKIDDVK 230 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKI-HD 228 TV + I + + QK++ + + ++++ Sbjct: 231 GLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEATFGELAQQYSQDPGSA 290 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R++ + ALK Sbjct: 291 AQKGELGYQTPDLYVPEFKHQIETLPVGQISEPFQTVHGWHIVEVLDRREVDRTDSALKN 350 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + + ++++LR++A + Sbjct: 351 KAYRILFNRKFNEEASAWLQELRASAFVE 379 >gi|153831363|ref|ZP_01984030.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae 623-39] gi|229529056|ref|ZP_04418446.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae 12129(1)] gi|148873155|gb|EDL71290.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae 623-39] gi|229332830|gb|EEN98316.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae 12129(1)] Length = 619 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 32/403 (7%), Positives = 91/403 (22%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y + + + I+ GD + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYL-ISGGNNAAAKVGNAEISRGDFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q G+ V Sbjct: 60 QNERNRMQAQLGDYFSNLLADPAYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDEQVRQ 119 Query: 105 ---FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 Q + + + L + G + +YL + ++ Sbjct: 120 LILEIPQFQSQGVFDSAAYQATLRRAGFTPEMYAEYLRKDLVRNQLMSALQGSEFSLAGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 DF K + EI + R ++ Sbjct: 180 VNLQDQLISQTRDIRTITLSLEDFAKKVTLSDEEIDQYYKTNTERFTRPEQVKVSYVELS 239 Query: 185 ---------------FSIPDNKLQNQGFVQKRIKDAE--------------ESRLRLPKD 215 L ++R + Sbjct: 240 ADGLKAQVSVDDAAAQQYYQEHLDKYSTAEQRNVSHILIEGNDEQKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ + + + G I + Sbjct: 300 ATLAKEKSQDLGSAAEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 D + + ++ + + + +L A Sbjct: 360 DDIKAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMAF 402 >gi|333010545|gb|EGK29978.1| chaperone surA [Shigella flexneri VA-6] Length = 428 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 46/287 (16%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R+NA + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRANAYVKI 425 >gi|108803753|ref|YP_643690.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rubrobacter xylanophilus DSM 9941] gi|108764996|gb|ABG03878.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rubrobacter xylanophilus DSM 9941] Length = 354 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 38/297 (12%), Positives = 82/297 (27%), Gaps = 29/297 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEK----------IAVQELIVETLKKQEIEK 92 G +T G + +++ LL Q GE+ + +L+ + + + + Sbjct: 52 VAVFEGGEVTQGQVQEQLDLLGRQSGLGEITPDSPQYQSAIAQIMPQLVTQEIAQAYARE 111 Query: 93 SGITFDSNTVNYFFVQHARNTGLS---------AEDFSSFLDKQGIGDNHFKQYLAIQSI 143 GIT V + E+ +Q + + + Sbjct: 112 HGITVTEREVEREIGRIKDQLVRQARAQGQDIGREEAFRRALEQAGITEAQLREQIREQL 171 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 V+ E E+ ++ + R V + + + + KR Sbjct: 172 PVQKVQERVAGDARPTEEEVRDYYEENREAQFTTPAQRCVRHILFNPDQRERAEEVKRRL 231 Query: 204 DAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPY 261 + +++ G + + P F+ + P Sbjct: 232 E------EGADFAELAREYSQDPGSREKGGDLGCIGRGETVPNFEEAAFGAEEGEVVGPV 285 Query: 262 VTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 TQ G I + D R E ++ + Q T + +V++ I Y Sbjct: 286 KTQFGYHVIKVYDVRRESTEPLSEVEDRIREQLAATAQAEKFQRWVERQEELRDIRY 342 >gi|254286721|ref|ZP_04961675.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae AM-19226] gi|150423148|gb|EDN15095.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae AM-19226] Length = 619 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 32/403 (7%), Positives = 91/403 (22%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y + + + I+ GD + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYL-ISGGNNAAAKVGNAEISRGDFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q G+ V Sbjct: 60 QNERNRMQAQLGDYFSNLLADPAYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDEQVRQ 119 Query: 105 ---FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 Q + + + L + G + +YL + ++ Sbjct: 120 LILEIPQFQSQGVFDSAAYQATLRRAGFTPEMYAEYLRKDLVRNQLMSALQGSEFSLSGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 DF K + EI + R ++ Sbjct: 180 VNLQDQLISQTRDIRTITLSLEDFAKKVTLSDEEIEQYYKTNTERFTRPEQVKVSYVELS 239 Query: 185 ---------------FSIPDNKLQNQGFVQKRIKDAE--------------ESRLRLPKD 215 L ++R + Sbjct: 240 ADGLKAKVSVDDAAAQQYYQEHLDKYSTAEQRNVSHILIEGNDEQKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ + + + G I + Sbjct: 300 ATLAKEKSQDLGSAAEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 D + + ++ + + + +L A Sbjct: 360 DDIKAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMAF 402 >gi|254417887|ref|ZP_05031611.1| SurA N-terminal domain family [Brevundimonas sp. BAL3] gi|196184064|gb|EDX79040.1| SurA N-terminal domain family [Brevundimonas sp. BAL3] Length = 393 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 51/288 (17%), Positives = 111/288 (38%), Gaps = 16/288 (5%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQ-------KINGELEKIAVQELIVETLKKQEI 90 M+ I T+N ++IT D+ +++ +L + +++ A+ LI + LK QEI Sbjct: 1 MADGIVATVNDKIITGFDLRQQMLMLIASSQVQPTEQNLPAIQQAALNRLIEQRLKAQEI 60 Query: 91 EKSGI-TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 K ++ Q AR G++ + FL + GI N F++ L + W +V Sbjct: 61 TKFESLKVTDQEIDEEIAQMARQAGVTPAAYMEFLQQGGIQPNAFRESLRTEIGWGQLVP 120 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 F + +++ +++ + + + ++ + + + ++ Sbjct: 121 GRFNSRARPSTLQVDQEVRRLNDAAAQPQYLIGEIYIEAARVGGQEAAMNGARQLVQQII 180 Query: 210 LRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKG 266 + ++F+S + G A ++++ + P Q + + +NP G Sbjct: 181 -QGAPFQAVAQQFSSAPSASARVPGDAGWVVKGTVQPALQTIFDQLQPGQLSNPIAVDGG 239 Query: 267 VEYIAICDKRD-LGGEIALKAYLSAQNTPTKIE---KHEAEYVKKLRS 310 V I + DKRD + L + T E ++ LR Sbjct: 240 VYIIYMRDKRDGAATSLVSLRQLMVELPETASEADLAAATRTLEGLRQ 287 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 35/267 (13%), Positives = 78/267 (29%), Gaps = 12/267 (4%) Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEI---EKSGITFDSNTVNYFFVQHAR 111 + + + L + LI E + +++ + V Sbjct: 133 QVDQEVRRLNDAAAQPQY-------LIGEIYIEAARVGGQEAAMNGARQLVQQIIQGAPF 185 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY-GNLEMEIPANKQKM 170 + + GD + +Q + + + ++ M Sbjct: 186 QAVAQQFSSAPSASARVPGDAGWVVKGTVQPALQTIFDQLQPGQLSNPIAVDGGVYIIYM 245 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 ++ L + + LR +C+ + A V Sbjct: 246 RDKRDGAATSLVSLRQLMVELPETASEADLAAATRTLEGLRQGLNCDNILSQARATQGVI 305 Query: 231 IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 ++L PQFQ + + + P T G+ +A+C +R G E + + Sbjct: 306 GADLGESDVANLAPQFQQFARTGEIGSVSTPIRTPLGLHLVAVCGRRVGGPEAPNRQQVE 365 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + E Y++ LRS+A+I + Sbjct: 366 GRLRSQNLAVLERRYLRDLRSDALIEF 392 >gi|300821942|ref|ZP_07102086.1| PPIC-type PPIASE domain protein [Escherichia coli MS 119-7] gi|300905457|ref|ZP_07123223.1| PPIC-type PPIASE domain protein [Escherichia coli MS 84-1] gi|300923997|ref|ZP_07139998.1| PPIC-type PPIASE domain protein [Escherichia coli MS 182-1] gi|301305055|ref|ZP_07211156.1| PPIC-type PPIASE domain protein [Escherichia coli MS 124-1] gi|301330176|ref|ZP_07222838.1| PPIC-type PPIASE domain protein [Escherichia coli MS 78-1] gi|331666290|ref|ZP_08367171.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Escherichia coli TA271] gi|331680626|ref|ZP_08381285.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Escherichia coli H591] gi|300402673|gb|EFJ86211.1| PPIC-type PPIASE domain protein [Escherichia coli MS 84-1] gi|300419766|gb|EFK03077.1| PPIC-type PPIASE domain protein [Escherichia coli MS 182-1] gi|300525542|gb|EFK46611.1| PPIC-type PPIASE domain protein [Escherichia coli MS 119-7] gi|300839662|gb|EFK67422.1| PPIC-type PPIASE domain protein [Escherichia coli MS 124-1] gi|300843816|gb|EFK71576.1| PPIC-type PPIASE domain protein [Escherichia coli MS 78-1] gi|315255671|gb|EFU35639.1| PPIC-type PPIASE domain protein [Escherichia coli MS 85-1] gi|331066501|gb|EGI38378.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Escherichia coli TA271] gi|331072089|gb|EGI43425.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Escherichia coli H591] Length = 428 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 82.4 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPGSANQGGDLGWATADIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|227113469|ref|ZP_03827125.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 626 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 38/398 (9%), Positives = 110/398 (27%), Gaps = 87/398 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ ++ + + ++ F + + Y +NG+ IT + + + Sbjct: 1 MMDNLRTAANNVVLKIILALIIASFVLTGVGDYLIGGSGDY-AAKVNGQEITRAQLEQAV 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + ++ +L + A+ +LI ETL Q K G+ + Sbjct: 60 QNERSRQQETLGENFSLLASNDGYMQQLRRQALSQLIDETLLDQYANKLGLNISDEQIKQ 119 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------ND 151 + E + + + G+ + + Q L Q +++ + Sbjct: 120 AIFDVPAFQTDNRFDNEKYLDQVRRLGVTPDMYAQMLRKQLTSQQLIRGFGNTAFLLPQE 179 Query: 152 FMLKYG-----------------------NLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + EI + + K + + ++ Sbjct: 180 IDNLVKLAAQDRVVRVATIDIAAKAKAQTVADDEIQSYYDQNKGNFIAPEEFKVSYITLD 239 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA------------------------- 223 + + V + + + + +KF+ Sbjct: 240 AASIMDGVKVDDAAINDFYEQNKSGYSQPERKKFSVIQVKNEADAASVLDALKQGGDFAT 299 Query: 224 -------SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 I + G ++ E+ + + + + + + G + + D + Sbjct: 300 LAKEKSTDVISRRNGGDLGWMDENSMIDELKQAKLTEKGQVSEAIKSSVGYLIVRLDDVQ 359 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++A ++ + K + +K+ A Sbjct: 360 PQQVKPLSEVRAEIAEKVKHEKAQDGYYALQQKVSEAA 397 >gi|15641920|ref|NP_231552.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591616|ref|ZP_01678864.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae 2740-80] gi|121727851|ref|ZP_01680918.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae V52] gi|147674490|ref|YP_001217451.1| peptidyl-prolyl cis-trans isomerase D [Vibrio cholerae O395] gi|153820108|ref|ZP_01972775.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae NCTC 8457] gi|153823840|ref|ZP_01976507.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae B33] gi|227082048|ref|YP_002810599.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae M66-2] gi|229507986|ref|ZP_04397491.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae BX 330286] gi|229511777|ref|ZP_04401256.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae B33] gi|229518914|ref|ZP_04408357.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae RC9] gi|229607532|ref|YP_002878180.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae MJ-1236] gi|254849006|ref|ZP_05238356.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae MO10] gi|255745323|ref|ZP_05419272.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholera CIRS 101] gi|262156047|ref|ZP_06029167.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae INDRE 91/1] gi|262167880|ref|ZP_06035580.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae RC27] gi|298498044|ref|ZP_07007851.1| peptidyl-prolyl cis-trans isomerase D [Vibrio cholerae MAK 757] gi|9656453|gb|AAF95066.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546529|gb|EAX56737.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae 2740-80] gi|121629887|gb|EAX62301.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae V52] gi|126509350|gb|EAZ71944.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae NCTC 8457] gi|126518637|gb|EAZ75860.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae B33] gi|146316373|gb|ABQ20912.1| peptidyl-prolyl cis-trans isomerase D [Vibrio cholerae O395] gi|227009936|gb|ACP06148.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae M66-2] gi|227013816|gb|ACP10026.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae O395] gi|229343603|gb|EEO08578.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae RC9] gi|229351742|gb|EEO16683.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae B33] gi|229355491|gb|EEO20412.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae BX 330286] gi|229370187|gb|ACQ60610.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae MJ-1236] gi|254844711|gb|EET23125.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae MO10] gi|255737153|gb|EET92549.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholera CIRS 101] gi|262023607|gb|EEY42308.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae RC27] gi|262030225|gb|EEY48869.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae INDRE 91/1] gi|297542377|gb|EFH78427.1| peptidyl-prolyl cis-trans isomerase D [Vibrio cholerae MAK 757] Length = 619 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 32/403 (7%), Positives = 91/403 (22%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y + + + I+ GD + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYL-ISGGNNAAAKVGNAEISRGDFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q G+ V Sbjct: 60 QNERNRMQAQLGDYFSNLLADPTYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDEQVRQ 119 Query: 105 ---FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 Q + + + L + G + +YL + ++ Sbjct: 120 LILEIPQFQSQGVFDSTAYQATLRRAGFTPEMYAEYLRKDLVRNQLMSALQGSEFSLAGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 DF K + EI + R ++ Sbjct: 180 VNLQDQLISQTRDIRTITLSLEDFAKKVTLSDEEIDQYYKTNTERFTRPEQVKVSYVELS 239 Query: 185 ---------------FSIPDNKLQNQGFVQKRIKDAE--------------ESRLRLPKD 215 L ++R + Sbjct: 240 ADGLKAQVSVDDAAAQQYYQEHLDKYSTAEQRNVSHILIEGNDEQKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ + + + G I + Sbjct: 300 ATLAKEKSQDLGSAAEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 D + + ++ + + + +L A Sbjct: 360 DDIKAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMAF 402 >gi|237704199|ref|ZP_04534680.1| surA [Escherichia sp. 3_2_53FAA] gi|226902111|gb|EEH88370.1| surA [Escherichia sp. 3_2_53FAA] Length = 428 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPSSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|145590048|ref|YP_001156645.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048454|gb|ABP35081.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 484 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 89/311 (28%), Gaps = 32/311 (10%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS-----------SRIRTTINGEVITDGDISKRIA 61 IKL+ F IVS + + + + +N IT DI RIA Sbjct: 8 IKLMNFIFFFAAVLFAGIVSAQDASKTTVATDGKVRNIDGVAAVVNTGYITRKDIDDRIA 67 Query: 62 LLKLQKIN----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 +LK Q L K+ ++ LI+E ++ Q E+ G S ++ A L+ Sbjct: 68 VLKKQGTKLPEGEALRKVILERLILEKIQLQNAEQEGFYVSSKELDKIIADTAAKNKLTF 127 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--- 174 + + ++ +KQ L + I + + K + EI + Sbjct: 128 VELKAKIEASSTSFEKYKQQLREEVIVSRYREREVDAKIKISDAEIDNFISERNRAMLSG 187 Query: 175 ------------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + Q +K+ Sbjct: 188 VTRPSPSANGGPEEIDVAQIFIPVDSGAGAGAQADAKKKADLLLREAKGDVDFLQLGAMA 247 Query: 223 ASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGG 280 A + + Y L F + + + G + + D+R + Sbjct: 248 AKDNPQIKFQELGYRPPDRLPQLFYEAVRNTGSGQVAGAVVKSPAGYHVLKVLDRRSMAA 307 Query: 281 EIALKAYLSAQ 291 A + Q Sbjct: 308 GSPPPAQAAPQ 318 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 54/139 (38%), Gaps = 2/139 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + L +Q ++ ++ R + + +K++ + G ++ Sbjct: 334 NARHILLRNRPGLSDQDAERRLQGYRDQVRAKTADFGDLAKKYSEDGSASNGGNLGWMGP 393 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKI 297 DL P+F+ + K +NP T+ G I + ++R+ + + A K Sbjct: 394 GDLVPEFELAMNKLQIGEVSNPVKTEFGWHLIQVIERREAQLTVEKQREFARAAIRSRKF 453 Query: 298 EKHEAEYVKKLRSNAIIHY 316 E+ +++++LR A + Sbjct: 454 EQAYQDWMRELRDTATVKI 472 >gi|187733861|ref|YP_001878866.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella boydii CDC 3083-94] gi|187430853|gb|ACD10127.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Shigella boydii CDC 3083-94] Length = 428 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQVRNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 81.6 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 91/287 (31%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V RN + + Q + + IQ + + Sbjct: 200 RAIVDQVRNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPDSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|229515304|ref|ZP_04404764.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae TMA 21] gi|229348009|gb|EEO12968.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae TMA 21] Length = 619 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 32/403 (7%), Positives = 91/403 (22%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y + + + I+ GD + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYL-ISGGNNAAAKVGNAEISRGDFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q G+ V Sbjct: 60 QNERNRMQAQLGDYFSNLLADPAYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDEQVRQ 119 Query: 105 ---FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 Q + + + L + G + +YL + ++ Sbjct: 120 LILEIPQFQSQGVFDSAAYQATLRRAGFTPEMYAEYLRKDLVRNQLMSALQGSEFSLSGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 DF K + EI + R ++ Sbjct: 180 VNLQDQLISQTRDIRTITLSLEDFAKKVTLSDEEIDQYYKTNTERFTRPEQVKVSYVELS 239 Query: 185 ---------------FSIPDNKLQNQGFVQKRIKDAE--------------ESRLRLPKD 215 L ++R + Sbjct: 240 ADGLKAQVSVDDEAAQQYYQEHLDKYSTAEQRNVSHILIEGNDEQKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ + + + G I + Sbjct: 300 ATLAKEKSQDLGSAAEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 D + + ++ + + + +L A Sbjct: 360 DDIKAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMAF 402 >gi|77464749|ref|YP_354253.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides 2.4.1] gi|77389167|gb|ABA80352.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides 2.4.1] Length = 286 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 77/281 (27%), Gaps = 50/281 (17%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKIAVQELIVETLKKQEIEKSG 94 + + T+NG+ IT G + A L Q + L K +++LI + Sbjct: 33 TADTVVATVNGQDITLGHMIALRAGLPDQYQSLPDDALFKGILEQLIQQAALA------- 85 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 S D Q + ++ Sbjct: 86 --------------------------QSIEGSVTKRDQLSLQNEERGFLSAVAMRRVVEG 119 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + ++ + + EY +L S D + + + Sbjct: 120 AVTDEALQAAYDARFADAAPQTEYNASHILVSSEDEAKKLKEEID-----------GGAD 168 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAIC 273 ++ +S + G + + F++ + K P TQ G + + Sbjct: 169 FATLAKEHSSDGAAANGGSLGWFGLGMMVKPFEDAVVKMKPGEVVGPIQTQFGWHLVKLN 228 Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + R E + + ++ A ++ ++ + A I Sbjct: 229 ETR--IAEKPSLDDMRDELAGQIEQEAVARHIDEVTAKAEI 267 >gi|300816090|ref|ZP_07096313.1| PPIC-type PPIASE domain protein [Escherichia coli MS 107-1] gi|300531297|gb|EFK52359.1| PPIC-type PPIASE domain protein [Escherichia coli MS 107-1] Length = 428 Score = 102 bits (252), Expect = 9e-20, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSAAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 82.0 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSAAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPGSANQGGDLGWATADIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|163746451|ref|ZP_02153809.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Oceanibulbus indolifex HEL-45] gi|161380336|gb|EDQ04747.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Oceanibulbus indolifex HEL-45] Length = 412 Score = 102 bits (252), Expect = 9e-20, Method: Composition-based stats. Identities = 37/268 (13%), Positives = 91/268 (33%), Gaps = 5/268 (1%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 + + I + +N E IT ++ +R ++L G + LI Sbjct: 17 AALALALVIGQSAAAQNLFAPVARVNDEAITGYEVQQRQRFMQLIGAPGTDSNSVIDSLI 76 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + L+ Q +E++G+ + + + A LS E+F L + I + F+ ++ I Sbjct: 77 EDRLRGQILEQAGLEVTPDGIRAGMTEFAGRADLSTEEFLKVLGQAQISEETFRDFIVIS 136 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + W D+++ + + + E+ + L+ ++ P + +R Sbjct: 137 AAWRDLIRARYNGRVNITDEEVERALGSSRGNNGLRVLLSEIIIPAPPQNADQVNALAER 196 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260 + + ++++ GK + +L + +L + T P Sbjct: 197 ----IAQSSSEAEFSSYASQYSATASRERGGKMPWTPLENLPVSLRPILLALAPGEVTAP 252 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYL 288 V + + G + + Sbjct: 253 LPIPNAVALFQLRGIEETGKPSVEYSQI 280 >gi|302343059|ref|YP_003807588.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfarculus baarsii DSM 2075] gi|301639672|gb|ADK84994.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfarculus baarsii DSM 2075] Length = 317 Score = 102 bits (252), Expect = 9e-20, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 100/307 (32%), Gaps = 20/307 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--- 71 +L++ ++ + S+ ++ E I+ +++ A + L Sbjct: 8 FFALACLLLVSTAAALLVACDRSGSTAWVAAVDDEKISLHQFNQKAAFMGLGADAKSLDA 67 Query: 72 -LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 L K + E+I + ++ K G+ ++ + G+ A F + +G+ Sbjct: 68 GLRKAVLDEMIQRLVILRQAAKLGVELSDQELDSEEERIHH--GMDAAAFREGMLARGMD 125 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 ++ LA + + + + EI A + K+ R I + +PD Sbjct: 126 YQDWRDELARDLLVRKTIDLVLTPRISVDQSEIVAYYDEHKDQFSRPEQILALHLVLPD- 184 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH-PQFQNL 249 +K + R ++ + G+ +L + + + Sbjct: 185 --------KKMADELVARMDRGQDMLAAAKEMGVALGSD--GRPDWLGRGHMPGKLEKAV 234 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEYVKK 307 P+ + G + + +KR +A + K + ++++ Sbjct: 235 FAARPGRPAGPFHSDYGYHVVWVIEKRPAMVLPLAEAAGRIQDALAKEKKDALTVGWLEE 294 Query: 308 LRSNAII 314 L+S + I Sbjct: 295 LKSESKI 301 >gi|83942078|ref|ZP_00954540.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. EE-36] gi|83847898|gb|EAP85773.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. EE-36] Length = 292 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 36/318 (11%), Positives = 83/318 (26%), Gaps = 58/318 (18%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSS--------RIRTTINGEVITD-GDISKR 59 + + L + V + + + + + T+NG IT I R Sbjct: 1 MQKPLTFLAPFVVAASLALPAVAQDDTAEKTDAQTDVTAETVVATVNGTDITIGSMIIAR 60 Query: 60 IAL--LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 L Q L K + +L+ +T Sbjct: 61 ATLPEQYQQLPPEVLFKGILDQLVQQTAL------------------------------- 89 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 F + + Q I +V++ E++ ++ E Sbjct: 90 --SQDFDGEVPKRIEMALENERRQLIAGEVIEKAMAQDVTEEELQAAYDEAYADAEPTEE 147 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 + +L ++ + ++ ++ ++ + G + Sbjct: 148 FSASHIL-----------VETEEEAQAVKKELDEGADFAELAKEKSTGPSGPAGGTLGWF 196 Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 + P F+ + + + P TQ G I + DKR E + + Sbjct: 197 GPGMMVPAFETAVAELEVGAVSEPVETQFGWHVIKLDDKRQK--EAPKLEDVKDELETQV 254 Query: 297 IEKHEAEYVKKLRSNAII 314 + ++K A + Sbjct: 255 RQVKAQTLIEKTTEAADV 272 >gi|156973716|ref|YP_001444623.1| peptidyl-prolyl cis-trans isomerse [Vibrio harveyi ATCC BAA-1116] gi|156525310|gb|ABU70396.1| hypothetical protein VIBHAR_01421 [Vibrio harveyi ATCC BAA-1116] Length = 619 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/406 (10%), Positives = 104/406 (25%), Gaps = 92/406 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY ++ + I G+ Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYI-VGGNNNAAAKVGNTEIARGEFEMAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + +I + L Q+ E G+ V Sbjct: 60 QNERNRMQAQLGDYFSQMLADPAYVESFRKSVLDRMINDVLLDQQAEALGLRISDAQVRS 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 Q N E + + L + G + F +Y+ + + ++ Sbjct: 120 MILDMPQFQSNGKFDQEIYQASLRRAGFSPDSFAEYMRRELVREQLLNALQTSEFTLPGE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +F K + EI + + R ++ + Sbjct: 180 VQSEGKLFTQTRDVRTITIDLNEFAKKVDLTDEEIQDYYKANPEMFTRPEQVKVAYIELS 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 ++L+ Q + + + + + Sbjct: 240 ADELKKQIQISDEDVKKYYDEHLDKYSTEEQRRVAHILVEGDDEAKAQAILDELNGGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 E+ ++ + G ++ + P F+ K+ + T + G I + Sbjct: 300 AKLAEEKSNDFGSAENGGDLGWIERDVMDPAFEEAAFALKNPGDITGLVKSDFGYHIIKL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + A + + K E +L A Y Sbjct: 360 EELKGAVAKPFSEVAAEIKQEMVDQKAVDQFYELQNELEKVAF-EY 404 >gi|254498443|ref|ZP_05111173.1| peptidyl-prolyl cis-trans isomerase D (SurA) [Legionella drancourtii LLAP12] gi|254352330|gb|EET11135.1| peptidyl-prolyl cis-trans isomerase D (SurA) [Legionella drancourtii LLAP12] Length = 421 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 99/304 (32%), Gaps = 18/304 (5%) Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEKIAV 77 + + ++ + ++ +N VIT ++ K++A+ K Q + + K + Sbjct: 1 MLAAVGVTQAKQLLDKVVAVVNNSVITASELDKQVAMAKKQLLAQRIQLPPDSVVRKQVL 60 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 Q LI L+ Q ++ GI+ D + + A + + KQG+G N +++ Sbjct: 61 QHLIDVDLQLQMAKQHGISVDDTELTQAIERIAAANHATLSQMREEIVKQGMGWNEYREN 120 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL-----IRTVLFSIPDNKL 192 + + I ++ + ++ + ++ V V+ + Sbjct: 121 IRKEMILSNLQQKAVGHDVMITNEQVEQYLKTEGDLPVDRTHLTYHLQNIVIPLNDEPTP 180 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLK 251 Q S + + ++ + G ++L F + ++ Sbjct: 181 AQMKKAQAIAAQILISIKKGADFNRVAVEKSTGDFALDSGDLGERHLAELPELFAKEVVN 240 Query: 252 KSQNNTTNPYVTQKGVEYIAIC----DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 P G++ I + +++ + ++ + + + + V Sbjct: 241 MKVGQVAGPLRAGNGLQLIKLVAIGGEQQQHMVTLTHVRHILLKPDANMLPEDVKKQVNN 300 Query: 308 LRSN 311 + Sbjct: 301 IYQQ 304 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 30/278 (10%), Positives = 81/278 (29%), Gaps = 9/278 (3%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-F 106 +IT+ + + + ++ +Q +++ + + Sbjct: 138 DVMITNEQVEQYLKTEGDLPVDRTHLTYHLQNIVIPLNDEPTPAQMKKAQAIAAQILISI 197 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML-----KYGNLEM 161 + A ++ E + + +VV + GN Sbjct: 198 KKGADFNRVAVEKSTGDFALDSGDLGERHLAELPELFAKEVVNMKVGQVAGPLRAGNGLQ 257 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 I + L + + V+K++ + + ++ Sbjct: 258 LIKLVAIGGEQQQHMVTLTHVRHILLKPDANMLPEDVKKQVNNIYQQLKAGKDFAKMAKQ 317 Query: 222 FASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279 ++ V G ++ +L P+F+ + K N + P TQ G I + ++ Sbjct: 318 YSLDPGSAVKGGDLGWVTPGELVPEFEKTMNKLALNQVSQPVKTQFGWHLIEVLGRKQQD 377 Query: 280 GEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A K + K + + + +R++A ++ Sbjct: 378 DSTAFKKQQIRQFLHQRKFAEAVQNWQQHIRTDAYVNI 415 >gi|253687447|ref|YP_003016637.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754025|gb|ACT12101.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 626 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 35/398 (8%), Positives = 109/398 (27%), Gaps = 87/398 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ ++ + + ++ F + + Y +NG+ IT + + + Sbjct: 1 MMDNLRTAANNVVLKIILALIIASFVLTGVGDYLIGGSGDY-AAKVNGQEITRAQLEQAV 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + ++ +L + A+ +LI ETL Q K G+ + Sbjct: 60 QNERSRQQEALGENFSLLASNDGYMQQLRRQALSQLIDETLLDQYANKLGLNISDEQIKQ 119 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------ND 151 N E + + + G+ + + Q L Q +++ + Sbjct: 120 AIFDVPAFQTNNRFDNEKYLDQVRRLGVTPDMYAQMLRKQLTSQQLIRGFGNSSFLLPQE 179 Query: 152 FMLKYG-----------------------NLEMEIPANKQKMKNITVREYLIRTV----- 183 + E+ + + K + + Sbjct: 180 IDNLVKLAAQDRVVRVATIDIAAKAKAQTVADDEVQSYYDQNKGNFIAPEEFKVSYITLD 239 Query: 184 --------------LFSIPDNKLQNQGFVQKRIKDAEESRLR------------LPKDCN 217 + + + +++ + + Sbjct: 240 AASIMDGVKVDDAAINDFYEQNKNDYSQPERKKFSVIQVKNEADATSVLDALKQGGDFAT 299 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ I + G ++ E+ + + + + + + G + + D + Sbjct: 300 LAKEKSTDIISRRNGGDLGWMDENSMIDELKQAKLTEKGQISAAIKSSVGYLIVRLDDVQ 359 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++A ++ + K + +K+ A Sbjct: 360 PQQIKPLSEVRAEIAEKVKHEKAQDGYYALQQKVSEAA 397 >gi|319778501|ref|YP_004129414.1| Survival protein SurA precursor [Taylorella equigenitalis MCE9] gi|317108525|gb|ADU91271.1| Survival protein SurA precursor [Taylorella equigenitalis MCE9] Length = 491 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 43/317 (13%), Positives = 93/317 (29%), Gaps = 39/317 (12%) Query: 11 DFIKLLTTYFVLIIFCIVPIVS-----------YKSWAMSSRIRTTINGEVITDGDISKR 59 F K + T + + S S + +I +N EVIT GD + R Sbjct: 2 SFTKKIITLSLALSSVFAIAQSDTKQVKNQVKHTLSKNATEQILAVVNDEVITMGDFASR 61 Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 + L++ ++ +Q LI E L ++ G+T V A GL+ E Sbjct: 62 LNTLRISGQ-HFSDEAVLQSLIDEKLMDTFAKERGLTVSDQRVAQAIQNIAAQNGLTPEQ 120 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + + I + + + + Q + D+ + +I A + + Y Sbjct: 121 MKAASSQYNINWDEYLKNIRQQILIEDLKAAIIRDRINITPHDIEAYLAQNPTGLPKGYK 180 Query: 180 --------------------------IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + + + + + +A + Sbjct: 181 EPVKVEPRFEKRQVVEQYFVPKAISLQHIYIRVPEGSSPETVAAAKAKANEALSKIRKGQ 240 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAI 272 K + +++ + G + D F N T+ + G + + Sbjct: 241 KFADVARQYSDGPEAANGGNLGIRMNEDWPALFMNATKNVRDGRTSGVFQAANGFHILRV 300 Query: 273 CDKRDLGGEIALKAYLS 289 ++R L + + Sbjct: 301 VERRGLVDQRVKTVNVR 317 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 64/222 (28%), Gaps = 4/222 (1%) Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 N +A F G + + V Sbjct: 263 IRMNEDWPALFMNATKNVRDGRTSGVFQAANGFHILRVVERRGLVDQRVKTVNVRLPDPP 322 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 E K + V E +R +L N + ++ ++I D + Sbjct: 323 QPQLSEKEKAAIKEGPVEVEESHVRHILV--AINPVVDEQKAYEKIVDIANQLKSGAEFS 380 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK 275 + EK++ G +++ P F N + P T+ G + + ++ Sbjct: 381 DLAEKYSDDTSAPLGGDLSWIVRGSADPAFDQAAFSLPLNQVSEPIRTKFGWHIMEVLER 440 Query: 276 RDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 R L + ++ + + E +++ +LR+ + I Sbjct: 441 RSLDRKSDIRKDVAYEMLYQQQSENILEDWINQLRTQSYIEN 482 >gi|153827658|ref|ZP_01980325.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae MZO-2] gi|149737864|gb|EDM52769.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae MZO-2] Length = 592 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 32/403 (7%), Positives = 91/403 (22%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y + + + I+ GD + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYL-ISGGNNAAAKVGNAEISRGDFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q G+ V Sbjct: 60 QNERNRMQAQLGDYFSNLLADPAYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDEQVRQ 119 Query: 105 ---FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 Q + + + L + G + +YL + ++ Sbjct: 120 LILEIPQFQSQGVFDSAAYQATLRRAGFTPEMYAEYLRKDLVRNQLMSALQGSEFSLSGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 DF K + EI + R ++ Sbjct: 180 VNLQDQLISQTRDIRTITLSLEDFAKKVTLSDEEIEQYYKTNTERFTRSEQVKVSYVELS 239 Query: 185 ---------------FSIPDNKLQNQGFVQKRIKDAE--------------ESRLRLPKD 215 L ++R + Sbjct: 240 ADGLKAQVSVDDAAAQQYYQEHLDKYSTAEQRNVSHILIEGNDEQKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ + + + G I + Sbjct: 300 ATLAKEKSQDLGSAAEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 D + + ++ + + + +L A Sbjct: 360 DDIKAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMAF 402 >gi|332665906|ref|YP_004448694.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliscomenobacter hydrossis DSM 1100] gi|332334720|gb|AEE51821.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliscomenobacter hydrossis DSM 1100] Length = 455 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 87/270 (32%), Gaps = 12/270 (4%) Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---NGELEKI 75 Y + + + + + ++ TI GE+ ++ ++ A K Q+ E + Sbjct: 3 YLIFAVLLTTTMAATAQRQILDKMVATIGGEITLLSEVEEQYAYTKAQRNGAVPPEARCM 62 Query: 76 AVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 V++ L+ + L Q S D + + R +D F + G N Sbjct: 63 LVEQILVNKLLLNQAKLDSIEVKDEEVESQLTARIERILSYMNDDLKQFEEYYGQTVNEV 122 Query: 135 KQYLAIQSIWPDVVKN---DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 ++ +++ M E+ +++ ++ + + I Sbjct: 123 REQFREDLRNNLLIERMRAKIMADVSVTPSEVKDFFRRIPKDSLPYFSSEVEVGEIVYKV 182 Query: 192 LQNQGFVQKRIKDAEESRLRL----PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 N+ + ++ E+ R R+ +K++ G + +F+ Sbjct: 183 PINKEQKRVTMEKLEDIRKRIVEGKEDFAELAKKYSDDGSARGGGDLGWAKRGKYVTEFE 242 Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276 K + + TQ G + + +R Sbjct: 243 AAAYKLEEMEVSPVIETQFGFHVLQMLGRR 272 >gi|329296585|ref|ZP_08253921.1| peptidyl-prolyl cis-trans isomerase SurA [Plautia stali symbiont] Length = 431 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 108/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ I ++ + M ++ +N V+ + D+ + +K Q L Sbjct: 7 LILGVAITANTAFAAPQMVDKVAAVVNNGVVLESDVDNMLRTVKSQAQQAGQQLPDDKTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ +++ + Q EK+G+ ++ A +S + S L G+ N Sbjct: 67 RHQFLERQVMDAIILQMGEKAGLQVSDQQLDQAIQSIAAQNRMSVDQLRSRLAYDGMNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L E+ +++ + + + +P + Sbjct: 127 DYRAQIRKEMLISEVRNNEVRRRVTILPQEVDTLAKQIGSQNTQGTELNISQILLPLPEN 186 Query: 193 QNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 Q V + A + +++ + G + +L F Q Sbjct: 187 PTQQQVDDQEALARQLVGELKGGADFGKLAVTYSADPQALKGGNMGWGKIEELPTLFSQT 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 L + + P + G + + D R ++ L ++ + +P + + Sbjct: 247 LSSAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVLARHILLKPSPILTDDQARQK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 IEQI--TADIK 315 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 57/168 (33%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + + KNI+V E L R +L +Q QK + + + Sbjct: 259 IRSGVGFHILKVNDLRGESKNISVTEVLARHILLKPSPILTDDQA-RQKIEQITADIKSG 317 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEY 269 + + G + P F++ L K + + P + G Sbjct: 318 KTTFAAAATQLSDDPGSANQGGDLDWASPEIDDPAFRDALLKLQKGQVSAPVHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R++A + Sbjct: 378 IQLLDTRQVDKTDAAQKERAYRLLFNRKFAEEAQTWMQEQRASAYVKI 425 >gi|218661050|ref|ZP_03516980.1| peptidyl-prolyl cis-trans isomerase D signal peptide protein [Rhizobium etli IE4771] Length = 293 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 79/301 (26%), Gaps = 49/301 (16%) Query: 22 LIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRIALL---KLQKINGELEKIAV 77 + V++++ A + + I ++ +A L Q + + + A+ Sbjct: 7 FALLAFATFVAFQAPAHAEDAVVAKVGNLEIHQSELDLAVANLDPQLAQLPDDQKKVAAL 66 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 I L + T + D++ Sbjct: 67 SAAIDVKLL---------------AADAITEKLDQTDEFKKRMQYLSDRE---------- 101 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 + K + E++ +K+ E R +L Sbjct: 102 -----LHNAYFKKHVVDTVSPDEIKARYDKEVAALPKQEEVHARHIL-----------VK 145 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256 + K+ + ++ ++ + G Y + +F++ + Sbjct: 146 TEDEAKEIIKQLDAGKDFAELAKEKSTDPNKSEGGDLGYFSRGRMVKEFEDAAFALEKGT 205 Query: 257 TTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + DKRD + Q + + + +++A I Sbjct: 206 YSKTPVKTDFGYHVIKVEDKRDAPP--PPFDQVQDQVRQLVMRDKYLTLLNQAKTSAKIE 263 Query: 316 Y 316 Sbjct: 264 I 264 >gi|82775458|ref|YP_401805.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella dysenteriae Sd197] gi|309787287|ref|ZP_07681899.1| chaperone surA [Shigella dysenteriae 1617] gi|121956480|sp|Q32K41|SURA_SHIDS RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|81239606|gb|ABB60316.1| survival protein [Shigella dysenteriae Sd197] gi|308924865|gb|EFP70360.1| chaperone surA [Shigella dysenteriae 1617] Length = 428 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 106/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLNQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 82.0 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPGSANQGGDLGWATADIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|229523938|ref|ZP_04413343.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae bv. albensis VL426] gi|229337519|gb|EEO02536.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae bv. albensis VL426] Length = 619 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 32/403 (7%), Positives = 91/403 (22%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y + + + I+ GD + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYL-ISGGNNAAAKVGNAEISRGDFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q G+ V Sbjct: 60 QNERNRMQAQLGDYFSNLLADPAYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDEQVRQ 119 Query: 105 ---FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 Q + + + L + G + +YL + ++ Sbjct: 120 LILEIPQFQSQGVFDSAAYQATLRRAGFTPEMYAEYLRKDLVRNQLMSALQGSEFSLAGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 DF K + EI + R ++ Sbjct: 180 VNLQDQLISQTRDIRTITLSLEDFAKKVTLSDEEIDQYYKTNTERFTRPEQVKVSYVELS 239 Query: 185 ---------------FSIPDNKLQNQGFVQKRIKDAE--------------ESRLRLPKD 215 L ++R + Sbjct: 240 ADGLKAQVSVDDAAAQQYYQEHLDKYSTAEQRNVSHILIEGNDEQKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ + + + G I + Sbjct: 300 ATLAKEKSQDLGSAAEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRL 359 Query: 273 CDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 D + + ++ + + + +L A Sbjct: 360 DDIKAPVVKPCSEVEQAIKQELIDQQALDSFYAKQSELEKMAF 402 >gi|262189698|ref|ZP_06048066.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae CT 5369-93] gi|262034418|gb|EEY52790.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae CT 5369-93] Length = 365 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 28/246 (11%), Positives = 88/246 (35%), Gaps = 4/246 (1%) Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L + +++LI++TL++QE ++ G+ D N +N + A+N + E + + ++G+ Sbjct: 2 LREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASVAQEGLTY 61 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 F++ + + D + L E+ + + T + + + Sbjct: 62 PEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISHIQLRVDD 121 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-L 250 Q++ + ++ + G ++ + ++ F + Sbjct: 122 GQDKSAAETLANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIK 181 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 +++ + P+ + G + I D + + ++ + T ++ + + + Sbjct: 182 MQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEGAQKQLNE 241 Query: 308 LRSNAI 313 Sbjct: 242 FVQRIK 247 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 82/269 (30%), Gaps = 4/269 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ LL + KI+ +L V+ + + ++ N + Sbjct: 88 ILPAEVDTLAELLAQETDATVQYKISHIQLRVDDGQDKSAAETLANKLVNDLRNGADFAQ 147 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + G + I + + I Sbjct: 148 MAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 207 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKI-HD 228 TV + I + + QK++ + + ++++ Sbjct: 208 GLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSA 267 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286 G+ Y P+F++ ++ + P+ T G + + D+R++ + ALK Sbjct: 268 AQKGELGYQTPDLYVPEFKHQIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKN 327 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + + ++++LR++A + Sbjct: 328 KAYRILFNRKFNEEASAWLQELRASAFVE 356 >gi|126463590|ref|YP_001044704.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides ATCC 17029] gi|126105254|gb|ABN77932.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides ATCC 17029] Length = 284 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 77/281 (27%), Gaps = 50/281 (17%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKIAVQELIVETLKKQEIEKSG 94 + + T+NG+ IT G + A L Q + L K +++LI + Sbjct: 31 TADTVVATVNGQDITLGHMIALRAGLPDQYQSLPDDALFKGILEQLIQQAALA------- 83 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 S D Q + ++ Sbjct: 84 --------------------------QSIEGSVTKRDQLSLQNEERGFLSAVAMRRVVEG 117 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + ++ + + EY +L S D + + + Sbjct: 118 AVTDEALQAAYDARFADAAPQTEYNASHILVSSEDEAKKLKEEID-----------GGAD 166 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAIC 273 ++ +S + G + + F++ + K P TQ G + + Sbjct: 167 FAVLAKEHSSDGAAANGGSLGWFGLGMMVKPFEDAVVKMKPGEVVGPIQTQFGWHLVKLN 226 Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + R E + + ++ A ++ ++ + A I Sbjct: 227 ETR--IAEKPSLDDMRDELAGQIEQEAVARHIDEVTAKAEI 265 >gi|319789892|ref|YP_004151525.1| SurA domain protein [Thermovibrio ammonificans HB-1] gi|317114394|gb|ADU96884.1| SurA domain protein [Thermovibrio ammonificans HB-1] Length = 282 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 93/286 (32%), Gaps = 23/286 (8%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 + I +NG+ I D+ + + + ++A+ LI + + Sbjct: 17 SQAKVVDYIAAVVNGQPILYSDVVRFARENHINNL-----RVALDRLIEREILLTQARSE 71 Query: 94 GITFDSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 GI+ + ++ AR G E+F L+K+GI + ++ + Q I ++ D Sbjct: 72 GISVSDKELKTALLELARKNGFKSLEEFKKALEKEGIPFSRVEESVKDQLIVAKLIARDV 131 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 K ++E+ +K E + + + + + Sbjct: 132 RSKVKVSDIELDKL--CLKVEGKPEREVYYIYTKNRADAEKAMELLA-----------NG 178 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIA 271 + + + G Y+ L ++ + + + G + Sbjct: 179 VPFQKVARELSQDPMTAQNGGYLGYVSPGMLVKPLDRVVWSIKPGSYRLVRLKDGYYIVY 238 Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + ++ + L Q + +K EY++ L+ +A + Y Sbjct: 239 VKGEKRGQC---NREKLREQLFAQRFQKALKEYIENLKRSASVKVY 281 >gi|153854234|ref|ZP_01995542.1| hypothetical protein DORLON_01534 [Dorea longicatena DSM 13814] gi|149753283|gb|EDM63214.1| hypothetical protein DORLON_01534 [Dorea longicatena DSM 13814] Length = 245 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 78/281 (27%), Gaps = 46/281 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKIN----GELEKIAVQELIVETLKKQEIEKS 93 M +I T+ G IT+ ++ I L ++ + K ++LI Sbjct: 1 MEQKIIATVGGHQITEAEVEAFIHSLPREQQAYAAHPDFRKQCEEQLI------------ 48 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 A+ D + + ++ F Sbjct: 49 -----------AVYAFAKYGEEEKIDETEEFKNVME-------NARKDILAQMAMRKLF- 89 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + EI + K+ + + + + +K + Sbjct: 90 ATVNVTDDEIKEYYEANKSKYSKGASVHAKHILVDNE--------EKCTELLNAITSGEK 141 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 + ++ ++ + G + +F++ + P TQ G I + Sbjct: 142 VFEDVAKESSTCPSGANGGDLGEFGRGQMVKEFEDAAFAAEVGHVVGPVKTQFGYHLIKV 201 Query: 273 CDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 DK++ +K + A+ + K E+ V +L+ Sbjct: 202 EDKKEAGESSLEEVKDQIRAELSQKKQEEAYRAKVDELKKK 242 >gi|323157883|gb|EFZ43986.1| chaperone surA [Escherichia coli EPECa14] Length = 356 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 107/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 >gi|302877391|ref|YP_003845955.1| SurA domain [Gallionella capsiferriformans ES-2] gi|302580180|gb|ADL54191.1| SurA domain [Gallionella capsiferriformans ES-2] Length = 440 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 36/328 (10%), Positives = 108/328 (32%), Gaps = 27/328 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRI---RTTI-------NGEVITDGDISKRIAL 62 + + +L + ++ TI N +VIT ++++R+ + Sbjct: 1 MSKIKFPVLLSVLSLMSTPVLAVEKHVIEPQQQVATIDAVVAVVNDDVITRLELNERLRM 60 Query: 63 LKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 + Q LE ++ +I E L+ Q +++G+ D ++ + A+ Sbjct: 61 VVSQLKKQGTPLPEGAVLETQVLERMIAEMLQAQFAKENGVRVDDTQLDMAITRIAQQNN 120 Query: 115 LS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 +F + L+ G+ F++ + + + + + + K + E+ + Sbjct: 121 FPSLVEFMAKLESDGVNVKKFREEIRAEIVSTRLREREVESKLVISDTEVDNYLSNKSKM 180 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK---FASKIHDVS 230 + + + + ++ + A+++ +L + + F+ + Sbjct: 181 GLDNDEYHLAHILVVVPEQASAEKIRAARERADQAFAQLSGGADFSQVSAGFSDAKDALK 240 Query: 231 IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALK 285 G + + P F N T + G + + +KR + Sbjct: 241 GGDLGWRAGDRIPPAFMNELQNLKPGQNTAVLRSPSGFHILKLVEKRGGSAPVVITQTHA 300 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++ + + E + + +++ Sbjct: 301 RHILIKTSEIVTEAEAKKQLLEIKQRID 328 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 50/139 (35%), Gaps = 1/139 (0%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 I +++ + +K++ + ++ + ++++ G +L Sbjct: 297 QTHARHILIKTSEIVTEAEAKKQLLEIKQRIDGGAGFAEQAKRYSQDGSAQQGGDLDWLS 356 Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKI 297 P+F+ + K Q TQ G I + +R+ E + K Sbjct: 357 PGQTVPEFEGAINKLQVGQMGMVQTQFGWHLIQVLARRNTDVSEQQKRQQARVSIGTFKS 416 Query: 298 EKHEAEYVKKLRSNAIIHY 316 E+ +++++LR A + Y Sbjct: 417 EELYQDWLRQLRDRAFVEY 435 >gi|253699826|ref|YP_003021015.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21] gi|251774676|gb|ACT17257.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21] Length = 325 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 43/324 (13%), Positives = 95/324 (29%), Gaps = 24/324 (7%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS-------RIRTTINGEVITDGDISK------- 58 ++++ T L+ C + + +I +N I I Sbjct: 1 MQVMKTIICLLSACALSLAGNHQAWAEPMAEDNGLQIAARVNDRPIYYHQIKANVERTLA 60 Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 + KI+ +++K ++ + + + + ++G + G Sbjct: 61 KYKRFGASKISDDVKKQVQKDELDRQVNMELLVQAGEKLKETDLEKKMEALLNMKGP--- 117 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 D S + K + ++ L + + + E E+ + Sbjct: 118 DGSPRVKKDESREKEMREQLRRNLLAESYLVLRGIQDVRVPEEELKRFYKDNSAKFAVPE 177 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKD----AEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 ++ I +K V K EE ++ +S G Sbjct: 178 AVKVSHIMIAVDKKATPQEVAKANAKIVKVREELLQGKKSFEELAKEHSSGDSAAKGGDL 237 Query: 235 QYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQ 291 Y+ + P+F + + ++ T+ G I DK+ + +K L Sbjct: 238 GYINPQFMPPEFDKAAFQLKSGEVSDVVKTKFGFHLIKAFDKKPGRIQEFSEVKVLLEKF 297 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIH 315 E+ AE +LR +A I Sbjct: 298 LLNQYQERKRAEIAMELRRDARIE 321 >gi|94986747|ref|YP_594680.1| parvulin-like peptidyl-prolyl isomerase [Lawsonia intracellularis PHE/MN1-00] gi|94730996|emb|CAJ54359.1| Parvulin-like peptidyl-prolyl isomerase [Lawsonia intracellularis PHE/MN1-00] Length = 308 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 101/297 (34%), Gaps = 22/297 (7%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-----------GELEKIAVQELIV 82 + ++ +NGE+IT D+ A ++ +LEK ++ +I Sbjct: 18 SAEQFINKTVAVVNGEIITLFDLQAETAPEIFRQQLNPNNPADKAKVEQLEKAILEGMIS 77 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + QE E+ + + V + + L+ E+F L+ Q + ++ FK+ + Sbjct: 78 NLILTQEAERLHVNVGKDEVESEYHNFIAKSQLTPEEFQYQLELQHLTEDSFKERIRSSI 137 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + ++ K + EI QK + ++ + P + + + Sbjct: 138 LRSRLLGAMVGRKIVVTKKEIEDYYQKNHDKLKNNNQLQLAILVYPPDINAKDWAARIK- 196 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPY 261 ++K + G + DL+P++ + L T+ Sbjct: 197 -------SGSVSFEEVVKKVSVGPKAKEGGDLGSIDIEDLNPEWLEQLSTMKPGEVTSLI 249 Query: 262 VTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + K + L Y+ K+E+ EY +LR A++ Sbjct: 250 DINGLQGQLKLINIIKGEPQTLETLTPYIEEILREPKLEERFKEYTDQLRKRAVVDI 306 >gi|307265095|ref|ZP_07546655.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919893|gb|EFN50107.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter wiegelii Rt8.B1] Length = 301 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 89/305 (29%), Gaps = 16/305 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-KINGELEK 74 + L++F + + S + + T+NGE IT+ + K +K Q + + + K Sbjct: 1 MKRKIALLLFFVFIVFLTVSCSTKKDVVATVNGENITNAEYKKAFDQVKAQIESSPQYTK 60 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + ++++ + N ++ ++ + K+ + Sbjct: 61 DIWDQDYQGKKFLDVVKENVLDSLIAQKLLVQEALKNNITVTDKEIADEYQKEKEVNKDI 120 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + + + + +++ E E+ + K ++ Sbjct: 121 TKEDVKNYLLINKLFDEYTKDVKVTEEELKKYYEDNKEQFEVVKASHILV---------- 170 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K +D ++ ++++ G + +F ++ Sbjct: 171 --ADEKTAEDIYNRLMKGEDFATLAKEYSIDTATKDQGGDLGEFPHGVMVSEFDQVVFSL 228 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + P T G I + +K + K + E L A Sbjct: 229 KKGEISKPVKTDYGYHIIKSEGI-TIKPFDEVKDAIEGYLLDDKKNQVIKEKYDALEKAA 287 Query: 313 IIHYY 317 I + Sbjct: 288 KIQKF 292 >gi|256059916|ref|ZP_05450102.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella neotomae 5K33] gi|261323889|ref|ZP_05963086.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella neotomae 5K33] gi|261299869|gb|EEY03366.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella neotomae 5K33] Length = 328 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 86/279 (30%), Gaps = 45/279 (16%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 S++ TING+ IT G++ + L Q +E+ + LI E EK + Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALIDIKAMAGEAEKDKL---- 116 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 Q ++L +++ + KN + K + Sbjct: 117 --------------------------DQTKEFKDRMEFLCERALHNEYFKNAIVDKISDA 150 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 ++ +K+ E R +L + + K + Sbjct: 151 DVRARYDKEIAAMPPQVEVRARHILVKTKEEAEA-----------IIKKLEGGAKFEDLA 199 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRD 277 + ++ S G Y E + P+F+ T P TQ G I + D+R Sbjct: 200 KASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLEDRRT 259 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + Q + + E VKKLR I Y Sbjct: 260 KQP--PAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 296 >gi|269961041|ref|ZP_06175410.1| peptidyl-prolyl cis-trans isomerse D [Vibrio harveyi 1DA3] gi|269834260|gb|EEZ88350.1| peptidyl-prolyl cis-trans isomerse D [Vibrio harveyi 1DA3] Length = 619 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 39/403 (9%), Positives = 102/403 (25%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY ++ + I G+ Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYIVGGNNNS-AAKVGNTEIARGEFEMAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + +I + L Q+ E G+ V Sbjct: 60 QNERNRMQAQLGDYFSQMLADPAYVESFRKSVLDRMINDVLLDQQAEALGLRISDAQVRS 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 Q N + + + L + G + F +Y+ + + ++ Sbjct: 120 MILDMPQFQSNGQFDQDIYQASLRRAGFSPDSFAEYMRRELVREQLLNALQTSEFTLPGE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +F K + EI + ++ R ++ + Sbjct: 180 VQAEGKLFTQTRDVRTITIDLNEFAKKVDLTDEEIQDYYKANPDMFTRPEQVKVAYIELS 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 +L+ Q V + + + + Sbjct: 240 AEELKKQVQVSDEDVKKYYDEHLDKYSTEEQRRVAHILVEGDDEAKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ K+ + T + G I + Sbjct: 300 ATVAKEKSDDFGSAENGGDLGWIERDVMDPAFEEAAFALKNPGDMTGLVKSDFGYHIIKL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + + A + + K E +L A Sbjct: 360 EELKGAVAKPYSEVAAEIKQEMIDQKAVDQFYELQNELEKVAF 402 >gi|218673531|ref|ZP_03523200.1| peptidyl-prolyl cis-trans isomerase D signal peptide protein [Rhizobium etli GR56] Length = 293 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 79/301 (26%), Gaps = 49/301 (16%) Query: 22 LIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRIALL---KLQKINGELEKIAV 77 + V++++ A + + I ++ +A L Q + + + A+ Sbjct: 7 FALLAFATFVAFQAPAHAEDAVVAKVGNLEIHQSELDLAVANLDPQLAQLPDDQKKVAAL 66 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 I L + T + D++ Sbjct: 67 SAAIDVKLL---------------AADAITEKLDQTEEFKKRMQYLSDRE---------- 101 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 + K + E++ +K+ E R +L Sbjct: 102 -----LHNAYFKKHVVDTVTPEEIKARYDKEVAALPKQEEVHARHIL-----------VK 145 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256 + K+ + ++ ++ + G Y + +F++ + Sbjct: 146 TEDEAKEIIKQLDAGKDFAELAKEKSTDPNKSEGGDLGYFSRGRMVKEFEDAAFALEKGT 205 Query: 257 TTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + DKRD + Q + + + +++A I Sbjct: 206 YSKTPVKTDFGYHVIKVEDKRDAPP--PPFDQVQDQVRQLVMRDKYLALLNQAKTSAKIE 263 Query: 316 Y 316 Sbjct: 264 I 264 >gi|320642095|gb|EFX11446.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7 str. G5101] Length = 428 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 106/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I + N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEARNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|322417708|ref|YP_004196931.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18] gi|320124095|gb|ADW11655.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18] Length = 308 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 88/311 (28%), Gaps = 45/311 (14%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSR-------IRTTINGEVITDGDISKRIALLKLQ 66 T ++ + V ++ + + + +NG ITD D K A L Q Sbjct: 4 SKTATVLLIALCVAVTGCKQQASTEAKKEGPGKGIVLAEVNGTTITDNDFYKEQAALPPQ 63 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 +E+I + ++ I + + Sbjct: 64 LKPMTETPEGKKEMIDTMVVRELIMQQAQKDGIDKSPEV--------------------- 102 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + L + I +K + E+ K K+ + IR Sbjct: 103 -----AAKLEDLKKRVIVEAFLKKKIEDSGVVSDAELQDYYNKNKDKFKSDAQIRASHIL 157 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + ++ ++ +K + G + + + P+F Sbjct: 158 ---------VKSEAEAQEIQKQLKAGASFEELAKKHSMDGAAQKGGDLGWFSKGSMIPEF 208 Query: 247 QNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAE 303 +++ + T+ TQ G I KR G +K + A PTK ++ + Sbjct: 209 ESVAFGLKEGETSGIVKTQFGYHIIKQTGKRPAGVRSFEEVKDQIKAALLPTKQQETFKK 268 Query: 304 YVKKLRSNAII 314 L+ A + Sbjct: 269 LKDDLKKEAKV 279 >gi|210620911|ref|ZP_03292328.1| hypothetical protein CLOHIR_00271 [Clostridium hiranonis DSM 13275] gi|210155123|gb|EEA86129.1| hypothetical protein CLOHIR_00271 [Clostridium hiranonis DSM 13275] Length = 260 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 85/278 (30%), Gaps = 37/278 (13%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQELIVETLKKQEIEKSGIT 96 ++ TING I++ D+ + + Q+ + E +K +++L+ + L E + + + Sbjct: 4 KVLATINGREISNIDLDNAVKSMHPQQQMRFQSEEGKKRLLEDLVNQELFYLEAKDNKVD 63 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 + + I + + FM Sbjct: 64 ETEEFK------------------------------ALMEQVTINMLKQHALNQLFMAAM 93 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 E + V E + +N+ + + + AEE + Sbjct: 94 PTEEEAKAYYDEHQDEFKVDEMAKARHILIKAENEDEFAAAEARAKEIAEEIKAGEKTFE 153 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK 275 ++ ++ G + + P+F+ ++ + P T G I + ++ Sbjct: 154 QAAIDYSDCPSNMQGGDLGLFGKGQMVPEFEEAVFSMNEGELSEPVKTSFGYHLIKVEER 213 Query: 276 RDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 G +K + + K K + V +LR Sbjct: 214 HKAGVSKFEEVKDEILGKLAQLKQLKAYEDKVAELREK 251 >gi|254708930|ref|ZP_05170741.1| parvulin-like PPIase precursor [Brucella pinnipedialis B2/94] gi|256030456|ref|ZP_05444070.1| parvulin-like PPIase precursor [Brucella pinnipedialis M292/94/1] gi|261316430|ref|ZP_05955627.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella pinnipedialis B2/94] gi|265987500|ref|ZP_06100057.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella pinnipedialis M292/94/1] gi|261295653|gb|EEX99149.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella pinnipedialis B2/94] gi|264659697|gb|EEZ29958.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella pinnipedialis M292/94/1] Length = 328 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 86/279 (30%), Gaps = 45/279 (16%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 S++ TING+ IT G++ + L Q +E+ + LI E EK + Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALIDIKAMAGEAEKDKL---- 116 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 Q ++L +++ + KN + K + Sbjct: 117 --------------------------DQTKEFKDRMEFLRERALHNEYFKNAIVDKISDA 150 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 ++ +K+ E R +L + + K + Sbjct: 151 DVRARYDKEIAAMPPQVEVRARHILVKTKEEAEA-----------IIKKLEGGAKFEDLA 199 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRD 277 + ++ S G Y E + P+F+ T P TQ G I + D+R Sbjct: 200 KASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLEDRRT 259 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + Q + + E VKKLR I Y Sbjct: 260 KQP--PAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 296 >gi|319781324|ref|YP_004140800.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167212|gb|ADV10750.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 305 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 80/283 (28%), Gaps = 49/283 (17%) Query: 40 SRIRTTINGEVITDGDI---SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 +++ T+NG+ +T+ D+ ++ Q + A+ I + + +G+ Sbjct: 50 NKVIATVNGQPLTEADLVLAEGELSQQFAQLPPEQRRAAALSAAIEIRVMAAQAVTTGLD 109 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 D + +L +++ ++V+ + K Sbjct: 110 KDPDFQRR------------------------------MAFLQQRALHGEMVEKGVVDKV 139 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + E+ +++ E R +L + + Sbjct: 140 TDAEVRARYDQEIANTPPTNELHARHILVKTKEEAEA-----------IIKQLDGGADFQ 188 Query: 217 NKLEKFASKIHDV-SIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAIC 273 + S S G + + P+F + T P TQ G I + Sbjct: 189 KLANEHTSDPSGKTSGGDLGWFGPGQMVPEFDKAASALEVGKYTEQPVQTQFGWHVIKLE 248 Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 DKR + Q I VK LR+ A + Sbjct: 249 DKRTKQP--PAFDDVKDQAKQAVIRDKYFALVKSLRAGAKVEI 289 >gi|331650947|ref|ZP_08351975.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Escherichia coli M718] gi|331051401|gb|EGI23450.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase surA) (Rotamase surA) [Escherichia coli M718] Length = 428 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 106/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAVPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LEQI--AADIK 315 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|85706339|ref|ZP_01037433.1| PPIC-type PPIASE domain protein [Roseovarius sp. 217] gi|85669112|gb|EAQ23979.1| PPIC-type PPIASE domain protein [Roseovarius sp. 217] Length = 420 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 34/288 (11%), Positives = 103/288 (35%), Gaps = 7/288 (2%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT---TINGEVITDGDISKRIAL 62 T ++ ++ L + + S + + +N + IT ++ +R + Sbjct: 4 LTRMTPILRRTLAALTLAAIGLTGLPGGVSPVQAQNLFAPAIHVNDQAITGYELQQRARM 63 Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 L L + G+ ++A ++LI E +K G+ + + V + A ++A+ S Sbjct: 64 LTLFRAPGDPRRLAREQLIEERIKLDAARAVGLVVEDDMVRTGMEEFAGRANMTADQLIS 123 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 L++ G+ F++++ W ++ + F + E ++ + + L+ Sbjct: 124 SLEEAGVSQQSFREFVRAGITWRELTRAQFASRVSVSEDDLERATRALTGGAAVRVLLSE 183 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 ++ + ++ + ++++ G+ +++ SDL Sbjct: 184 IILPVTSLGD---AEAKQALATQIAEADSEGDFAAAARQYSAAPSAGRGGRMEWVALSDL 240 Query: 243 HPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 + ++ + ++P G+ + D + + + Sbjct: 241 PAGLRPIVLGLAPGEVSDPLPIDGGLALFYMRDIEETSVAAPEYSAIE 288 Score = 42.0 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 4/84 (4%) Query: 235 QYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKG--VEYIAICDKRDL-GGEIALKAYLSA 290 ++ + T+ G + ++ +C + GE LS Sbjct: 334 GSKAPEEIPQDIAAALSQLDPGETSASVTRSNGQTLVFLMLCGRSPKLDGEAPSVEDLSN 393 Query: 291 QNTPTKIEKHEAEYVKKLRSNAII 314 +IE Y+++LR+ A I Sbjct: 394 FIRNQRIESFANGYLEQLRAEARI 417 >gi|308185631|ref|YP_003929762.1| survival protein SurA precursor [Pantoea vagans C9-1] gi|308056141|gb|ADO08313.1| survival protein SurA precursor [Pantoea vagans C9-1] Length = 431 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 106/310 (34%), Gaps = 18/310 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ I ++ + + ++ +N V+ + D+ + +K Q L Sbjct: 7 LILGVAISANTAFAAPQVVDKVAAVVNNGVVLESDVDGMMGTVKSQAQQAGQQLPDDKTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ I++ + Q EK+GI ++ A +S + S L G+ + Sbjct: 67 RHQILERQIMDNIILQMGEKAGIQISDEQLDQAIQNIAAQNRMSLDQLRSRLAYDGMNYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + +V N+ + L E+ ++ + + + +P + Sbjct: 127 VYRSQIRKEMTIAEVRNNEVRRRVTILPQEVDTLANQIGSQNSQGTELNVSHILLPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 Q V ++ A++ L + +++ + G + +L F Sbjct: 187 PTQQQVDEQETLAKQLVGELKNGADFGKMAVTYSADSQALKGGNMGWGKIEELPTLFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P + Sbjct: 247 LATAKKGDIVGPVRSGVGFHILKVNDLRGESKNVSVTEVHSRHILLKPSPILTDDQARAQ 306 Query: 305 VKKLRSNAII 314 ++++ A I Sbjct: 307 LEQI--AADI 314 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 87/294 (29%), Gaps = 26/294 (8%) Query: 43 RTTI-NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 + N EV I ++ + Q G ++ L E Sbjct: 138 IAEVRNNEVRRRVTILPQEVDTLANQIGSQNSQGTELNVSHILL-----PLPENPTQQQV 192 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND----- 151 + T+ V +N + ++ + I+ + + Sbjct: 193 DEQETLAKQLVGELKNGADFGKMAVTYSADSQALKGGNMGWGKIEELPTLFAQALATAKK 252 Query: 152 ------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 G +++ + + KN++V E R +L +Q + + A Sbjct: 253 GDIVGPVRSGVGFHILKVNDLRGESKNVSVTEVHSRHILLKPSPILTDDQA-RAQLEQIA 311 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVT 263 + R ++++ G + P F++ L + + T+ P + Sbjct: 312 ADIRSGKTTFAAAAKQYSDDPGSANQGGDLGWTSPEVFDPAFRDALLRLKKGQTSQPVHS 371 Query: 264 QKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + D R + + A K K + ++++ R++A + Sbjct: 372 SFGWHLIQLLDTRQVDKTDAAQKERAYRMLFNRKFAEEAQTWMQEQRASAYVKI 425 >gi|268316286|ref|YP_003290005.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus DSM 4252] gi|262333820|gb|ACY47617.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus DSM 4252] Length = 350 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 33/297 (11%), Positives = 89/297 (29%), Gaps = 21/297 (7%) Query: 35 SWAMSSRIRTTI----NGEVITDGDISKRIALLKLQKIN--------GELEKIAVQELIV 82 + S + + + +T + ++++ + + E+ K +++ IV Sbjct: 51 APVSDSTVAAIVTSEYGSDTLTAEEFRQQLSFILQRYPQIQMNPALMPEVHKSIIEDFIV 110 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + EI + GI D V Q + Q + + Q Sbjct: 111 RHVVDGEIARQGIQADPAAVEQELEQIRARFPSPEAFQEALT--QDGLTEDSLRGMIAQM 168 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + + +Q + ++ + P+ + V+ R Sbjct: 169 VRQRTFREQIESRATPPTDDE--VEQFRQQQAEEVHVQHILFRLAPNASEEEAAAVKARA 226 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN---TTN 259 + +S + + G ++ + F+ +++ TT Sbjct: 227 QAVLDSIRSGADFAEMARRHSEDGSAQEGGDLGFIRRGETVEPFEEAAFALRDSGDVTTE 286 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P T+ G I + ++R A Q + ++ +++L + A + Sbjct: 287 PVRTRFGYHLIRLLERRQGTPMDAA--EAREQLLQERKQEAVQHLLEELLAKATVRI 341 >gi|297579436|ref|ZP_06941364.1| peptidyl-prolyl cis-trans isomerase D [Vibrio cholerae RC385] gi|297537030|gb|EFH75863.1| peptidyl-prolyl cis-trans isomerase D [Vibrio cholerae RC385] Length = 619 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 31/403 (7%), Positives = 91/403 (22%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y + + + I+ GD + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYL-ISGGNNAAAKVGNAEISRGDFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q G+ V Sbjct: 60 QNERNRMQAQLGDYFSNLLADPAYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDEQVRQ 119 Query: 105 ---FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 Q + + + L + G + +YL + ++ Sbjct: 120 LILEIPQFQSQGVFDSAAYQATLRRAGFTPEMYAEYLRKDLVRNQLMSALQGSEFSLAGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 DF K + EI + R ++ Sbjct: 180 VNLQDQLISQTRDIRTITLSLEDFAKKVTLSDEEIDQYYKTNTERFTRPEQVKVSYVELS 239 Query: 185 ---------------FSIPDNKLQNQGFVQKRIKDAE--------------ESRLRLPKD 215 L ++R + Sbjct: 240 ADGLKAQVSVDDAAAQQYYQEHLDKYSTAEQRNVSHILIEGNDEQKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ + + + G I + Sbjct: 300 ATLAKEKSQDLGSAEEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + + ++ + + + +L A Sbjct: 360 DEIKAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMAF 402 >gi|89892936|ref|YP_516423.1| hypothetical protein DSY0190 [Desulfitobacterium hafniense Y51] gi|219666202|ref|YP_002456637.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfitobacterium hafniense DCB-2] gi|89332384|dbj|BAE81979.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219536462|gb|ACL18201.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfitobacterium hafniense DCB-2] Length = 315 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 36/329 (10%), Positives = 97/329 (29%), Gaps = 43/329 (13%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + F K + VL + + S A + +NGE IT+ D + R++ ++ Sbjct: 1 MRSFRKGIIAALVLTLAL-----TGCSSAGGDQWAAKVNGETITEQDFAARVSNVQKAYE 55 Query: 69 N--------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 +++ ++ +I L QE ++ + + ++ + G Sbjct: 56 GMGMDFSTDQGKEALNQVKSQVLEAMIASRLVIQEAQRLKLDVNDPSILEQEKNIIQMVG 115 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 + Q + + + + + + + + Sbjct: 116 ---------DESQYQEWLKQQAMTEDEVKNYFALSAEITKDVTVTPEQEKTFFENNQELY 166 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGK 233 + + + + + + + + ++ ++ S G Sbjct: 167 GGKGEEVQARHILVETEDEAKAIIAQ--------LDGGADFSELAKEKSTDTGSQSSGGY 218 Query: 234 AQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAICDKRDLG--GEIALKAYLS 289 + + P+F+ + T P ++ G I + D + A+K+ ++ Sbjct: 219 LGSFGKGKMVPEFEEAAFAQEVGTYTKTPVKSEFGYHIILVEDHKAATKADYEAVKSQVA 278 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAI--IHY 316 + Y +LR A I Y Sbjct: 279 EDALADAKAQKFGGYFDELREKAKANIEY 307 >gi|304396535|ref|ZP_07378416.1| Peptidylprolyl isomerase [Pantoea sp. aB] gi|304356044|gb|EFM20410.1| Peptidylprolyl isomerase [Pantoea sp. aB] Length = 431 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 107/304 (35%), Gaps = 16/304 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ I ++ + + ++ +N V+ + D+ ++ +K Q L Sbjct: 7 LILGVAISANTAFAAPQVVDKVAAVVNNGVVLESDVDGMMSTVKSQAQQAGQQLPDDKTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ I++ + Q +K+G+ ++ A +S + S L G+ + Sbjct: 67 RHQILERQIMDNIILQMGDKAGVQISDEQLDQAIQNIAAQNKMSLDQLRSRLAYDGMNYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + +V N+ + L E+ +++ + + + +P + Sbjct: 127 VYRSQIRKEMTIAEVRNNEVRRRITILPQEVDTLAKQIGSQNSQGTELNVSHILLPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 Q V ++ A++ L + +++ + G + +L F Sbjct: 187 PTQQQVDEQETLAKQLVGELKNGADFGKMAVTYSADSQALKGGNMGWGKIEELPTLFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSSAKKGDIVGPIRSGVGFHILKVNDLRGENKNVSVTEVHSRHILLKPSPILTDEQARAQ 306 Query: 305 VKKL 308 ++++ Sbjct: 307 LEQI 310 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 86/294 (29%), Gaps = 26/294 (8%) Query: 43 RTTI-NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 + N EV I ++ + Q G ++ L E Sbjct: 138 IAEVRNNEVRRRITILPQEVDTLAKQIGSQNSQGTELNVSHILL-----PLPENPTQQQV 192 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND----- 151 + T+ V +N + ++ + I+ + + Sbjct: 193 DEQETLAKQLVGELKNGADFGKMAVTYSADSQALKGGNMGWGKIEELPTLFAQALSSAKK 252 Query: 152 ------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 G +++ + + KN++V E R +L Q + + A Sbjct: 253 GDIVGPIRSGVGFHILKVNDLRGENKNVSVTEVHSRHILLKPSPILTDEQA-RAQLEQIA 311 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVT 263 + R ++++ G + P F++ L + + T+ P + Sbjct: 312 NDIRSGKTTFAAAAKQYSDDPGSANQGGDLGWTSPEVFDPAFRDALLRLKKGQTSQPVHS 371 Query: 264 QKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + D R + + A K K + ++++ R++A + Sbjct: 372 SFGWHLIQLLDTRQVDKTDAAQKERAYRMLFNRKFAEEAQTWMQEQRASAYVKI 425 >gi|217978662|ref|YP_002362809.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylocella silvestris BL2] gi|217504038|gb|ACK51447.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylocella silvestris BL2] Length = 322 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 34/279 (12%), Positives = 75/279 (26%), Gaps = 49/279 (17%) Query: 42 IRTTINGEVITDGDI----SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 + T+NG+ IT+ D+ L Q + V LI L Q+ + + Sbjct: 56 VLATVNGQEITENDLAIAKDDLAGSLPQQLQGKARDTYVVDFLIDGALVSQKAKADKLDA 115 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 H + + ++ Sbjct: 116 TPEFAKKLAYYHEK------------------------------LLMETLLGQVAKAALT 145 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + ++ + E R +L + + ++ + Sbjct: 146 DEAIKKTYDDALKAQKPETEVHARHILVATDADAEAVLKRLKA-----------GEEFAK 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ + G + + + P+F + K + P + G I + KR Sbjct: 195 VAKEVSKDTSA-DGGDLGWFTKDKMVPEFAEAAFKLEPGQLSAPVKSPFGWHIILVEGKR 253 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + Q + ++K + E V LR +A I Sbjct: 254 EKP--FPALDEVKDQVSRYVVQKAQGELVAGLRKDAKIE 290 >gi|27065591|pdb|1M5Y|A Chain A, Crystallographic Structure Of Sura, A Molecular Chaperone That Facilitates Outer Membrane Porin Folding gi|27065592|pdb|1M5Y|B Chain B, Crystallographic Structure Of Sura, A Molecular Chaperone That Facilitates Outer Membrane Porin Folding gi|27065593|pdb|1M5Y|C Chain C, Crystallographic Structure Of Sura, A Molecular Chaperone That Facilitates Outer Membrane Porin Folding gi|27065594|pdb|1M5Y|D Chain D, Crystallographic Structure Of Sura, A Molecular Chaperone That Facilitates Outer Membrane Porin Folding Length = 408 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 35/280 (12%), Positives = 92/280 (32%), Gaps = 18/280 (6%) Query: 52 TDGDISKRIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + D+ + +KL L ++ LI++ + Q +K G+ ++ Sbjct: 18 LESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLD 77 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 A+ ++ + S L G+ N ++ + + I +V N+ + L E+ Sbjct: 78 QAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEV 137 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR---LPKDCNKLE 220 + Q++ N + IP + V + A + Sbjct: 138 ESLAQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAI 197 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR--- 276 ++ ++ G+ + +L F + + P + G + + D R Sbjct: 198 AHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGES 257 Query: 277 -DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++ ++ + +P ++ ++++ A I Sbjct: 258 KNISVTEVHARHILLKPSPIMTDEQARVKLEQI--AADIK 295 Score = 83.2 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 123 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 179 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 180 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 239 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V K + A + + Sbjct: 240 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KLEQIAADIKSGK 298 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 299 TTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 358 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 359 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 405 >gi|91775766|ref|YP_545522.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacillus flagellatus KT] gi|91709753|gb|ABE49681.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacillus flagellatus KT] Length = 626 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 47/397 (11%), Positives = 112/397 (28%), Gaps = 94/397 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + ++ + + I F +V + SY A SS ++GE IT + S + Sbjct: 1 MLEAIRNRSKGWLAKVILAAITIPFALVGVDSYLRDAGSSVAVAKVDGESITVQEYSNAL 60 Query: 61 ALLKLQKING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ- 108 L+ + + EL++ + L+ L E++++ ++++ +Q Sbjct: 61 QNLRNRLQSEGKVDQAVIDGPELKQAVIDHLVEGRLLANEVKRAKFVVSDEQLSHYIMQE 120 Query: 109 --HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------------- 149 ++ S + FL ++ + F+ + + + Sbjct: 121 ESFHQDGQFSQALYDQFLAERRRTPSQFENEVRTDLLTMQAREGLSALAFVPNGVANNAI 180 Query: 150 ----------------NDFMLKYGNLEMEIPANKQKMKNITV------------------ 175 D++ + E E+ A ++ ++ Sbjct: 181 KVAHQSREVSIAEFRTADYLSQVKVTEDEVNAYYKEHQDKFKVPEQVKLEFVLLSANALI 240 Query: 176 ----------------------REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + R I QK + AEE + Sbjct: 241 PSQQVTEEEAREYYAQNAAQFQGDEQRRASHILIGFGVSPTPETKQKAKEKAEEVLALVK 300 Query: 214 KDCNKLEKFASKI-----HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGV 267 K+ + E+ A + G + F++ + ++ T G Sbjct: 301 KNPERFEQLAHQYSQDPGSKDKGGDLGLFGPGTMVKPFEDAVFSMKPGTISDLVETDFGY 360 Query: 268 EYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAE 303 I + + ++ + A+ K +E Sbjct: 361 HIIKLTEIHGSGQSFEDVQGQIRAELMYQKALAQFSE 397 >gi|326390841|ref|ZP_08212393.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter ethanolicus JW 200] gi|325993100|gb|EGD51540.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter ethanolicus JW 200] Length = 301 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 90/305 (29%), Gaps = 16/305 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-KINGELEK 74 + L++F + + S + + T+NGE IT+ + K +K Q + + + K Sbjct: 1 MKRKIALLLFFVFIVFLTVSCSTKKDVVATVNGENITNAEYKKAFDQVKAQIESSPQYTK 60 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + ++++ + N ++ ++ + K+ + Sbjct: 61 DIWDQDYQGKKFLDVVKENVLDSLIAQKLLVQEALKNNITVTDKEIADEYQKEKEVNKDI 120 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + + + + +++ E E+ + K ++ Sbjct: 121 TKEDVKNYLLINKLFDEYTKDVKVTEEELKKYYEDNKEQFEVVKASHILV---------- 170 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K +D ++ ++++ G + +F ++ Sbjct: 171 --ADEKTAEDIYNRLMKGEDFATLAKEYSIDTATKDQGGDLGEFPHGVMVSEFDQVVFSL 228 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + P T G I + +K + + K + E L A Sbjct: 229 KKGEISKPVKTDYGYHIIKSEGV-AIKPFNEVKDAIESYLLNDKKNQVIKEKYDALEKAA 287 Query: 313 IIHYY 317 I + Sbjct: 288 KIQKF 292 >gi|50120091|ref|YP_049258.1| peptidyl-prolyl cis-trans isomerase [Pectobacterium atrosepticum SCRI1043] gi|49610617|emb|CAG74062.1| peptidyl-prolyl cis-trans isomerase D [Pectobacterium atrosepticum SCRI1043] Length = 626 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 35/398 (8%), Positives = 109/398 (27%), Gaps = 87/398 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ ++ + + ++ F + + Y +NG+ IT + + + Sbjct: 1 MMDNLRTAANNVVLKIILALIIASFVLTGVGDYLIGGSGDY-AAKVNGQEITRAQLEQAV 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + ++ +L + A+ +LI ETL Q K G+ + Sbjct: 60 QNERSRQQETLGENFSLLASNDGYMQQLRRQALSQLIDETLLDQYANKLGLNISDAQIKQ 119 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------ND 151 N E + + + G+ + + Q L Q +++ + Sbjct: 120 AIFDVPAFQTNNRFDNEKYLDQVRRLGVTPDMYAQMLRKQLTSQQLIRGFGNTAFLLPQE 179 Query: 152 FMLKYG-----------------------NLEMEIPANKQKMKNITVREYLIRTV----- 183 + E+ + + K + + Sbjct: 180 IDNLVKLAAQDRVVRVATIDIAAKAKAQTVADDEVQSYYDQNKGNFIAPEEFKVSYITLD 239 Query: 184 --------------LFSIPDNKLQNQGFVQKRIKDAEESRLRLP------------KDCN 217 + + + +++ + + Sbjct: 240 AASIMDSVKVDDKAINDFYEQNKNDYSQPERKKFSVIQVKNEAEAASVLDSLKQGGDFAA 299 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ I + G ++ E+ + + + + + + G + + D + Sbjct: 300 LAKEKSTDIISRRNGGDLGWMDENSMIDELKQAKLTEKGQVSAAIKSSVGYLIVRLDDVQ 359 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++A ++ + K + +K+ A Sbjct: 360 PQQVKPLSEVRAEIAEKVKHEKAQDGYYALQQKISEAA 397 >gi|209551115|ref|YP_002283032.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536871|gb|ACI56806.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 293 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 84/301 (27%), Gaps = 49/301 (16%) Query: 22 LIIFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISKRIALL---KLQKINGELEKIAV 77 L + V+ ++ A + + + I ++ +A L Q + + + A+ Sbjct: 7 LAVLAFATFVALQAPAYADDAVIAKVGNLEIHQSELDLAVANLDPQLAQLPDDQKKVAAL 66 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 I L A D ++ Q QY Sbjct: 67 SAAIDVKLL------------------------------AADAAAEKLDQTDEFKKRMQY 96 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 L + + K + E++ +K+ E R +L Sbjct: 97 LTDRELHNAYFKKHVVDIVTPEEVKARYDKEVAALPKQEEVHARHIL-----------VK 145 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256 + KD + ++ ++ + G Y + +F++ + Sbjct: 146 TEDEAKDIIKQLDAGKDFAELAKEKSTDPNKSEGGDLGYFSRGRMVKEFEDAAFALEKGT 205 Query: 257 TTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + DKRD + Q + E + K +++A I Sbjct: 206 YSKTPVKTDFGYHVIKVEDKRDAPP--PPFEQVQDQVRQLVMRDKYLELLNKAKASAKIE 263 Query: 316 Y 316 Sbjct: 264 I 264 >gi|307942651|ref|ZP_07657999.1| cell-binding factor 2 [Roseibium sp. TrichSKD4] gi|307774290|gb|EFO33503.1| cell-binding factor 2 [Roseibium sp. TrichSKD4] Length = 286 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 81/302 (26%), Gaps = 48/302 (15%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---NGELEKIA 76 ++ F ++ S S A + + IT+ DI+ L + + I Sbjct: 13 IMVTAFALMLGTSAVSAAEPDDVIAKVGETEITEADIAFAAQDLGQELQRFPPSQWRGIL 72 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + ++ L Q + I D + Sbjct: 73 LDVIVDMELLAQAARDADIDKDPDFQKQL------------------------------D 102 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 +L ++++ + + +++ +KQ E R +L Sbjct: 103 FLTLRALRNAYIAQKIEGGVSDEDVQAAYDKQFADFEGDEEINARHILVKEKAEADAIVA 162 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 +Q ++ ++ + G + + + F+ + Sbjct: 163 ELQ-----------GGADFVELAKEKSTGPSGPNGGDLGFFVRGQMVGPFEEAAFALEPG 211 Query: 257 --TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T P TQ G I + +KR +SA + + ++ L+ + Sbjct: 212 AFTIEPVQTQFGWHVIKLEEKRKKP--KPTLEDVSAGLRQQLTRERYTKVMEDLKGYVTV 269 Query: 315 HY 316 Sbjct: 270 EI 271 >gi|17986407|ref|NP_539041.1| peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 1 str. 16M] gi|62290796|ref|YP_222589.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 1 str. 9-941] gi|82700707|ref|YP_415281.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis biovar Abortus 2308] gi|189025011|ref|YP_001935779.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus S19] gi|254696195|ref|ZP_05158023.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 2 str. 86/8/59] gi|254731113|ref|ZP_05189691.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 4 str. 292] gi|260546060|ref|ZP_05821800.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus NCTC 8038] gi|260758847|ref|ZP_05871195.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 4 str. 292] gi|260760571|ref|ZP_05872914.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 2 str. 86/8/59] gi|17982000|gb|AAL51305.1| peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 1 str. 16M] gi|62196928|gb|AAX75228.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 1 str. 9-941] gi|82616808|emb|CAJ11900.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis biovar Abortus 2308] gi|189020583|gb|ACD73305.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus S19] gi|260096167|gb|EEW80043.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus NCTC 8038] gi|260669165|gb|EEX56105.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 4 str. 292] gi|260671003|gb|EEX57824.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 2 str. 86/8/59] Length = 331 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 85/282 (30%), Gaps = 48/282 (17%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETLKKQEIEKSGIT 96 S++ TING+ IT G++ + L Q + A+ LI E EK + Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALAALIDIKAMAGEAEKDKL- 119 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 Q ++L +++ + KN + K Sbjct: 120 -----------------------------DQTKEFKDRMEFLRERALHNEYFKNAIVDKI 150 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + ++ +K+ E R +L + + K Sbjct: 151 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEEAEA-----------IIKKLEGGAKFE 199 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICD 274 + + ++ S G Y E + P+F+ T P TQ G I + D Sbjct: 200 DLAKASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLED 259 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R + Q + + E VKKLR I Y Sbjct: 260 RRTKQP--PAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 299 >gi|254690082|ref|ZP_05153336.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 6 str. 870] gi|256258335|ref|ZP_05463871.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 9 str. C68] gi|260755622|ref|ZP_05867970.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 6 str. 870] gi|260884648|ref|ZP_05896262.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 9 str. C68] gi|297247182|ref|ZP_06930900.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 5 str. B3196] gi|260675730|gb|EEX62551.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 6 str. 870] gi|260874176|gb|EEX81245.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 9 str. C68] gi|297174351|gb|EFH33698.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 5 str. B3196] Length = 331 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 85/282 (30%), Gaps = 48/282 (17%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETLKKQEIEKSGIT 96 S++ TING+ IT G++ + L Q + A+ LI E EK + Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALAALIDIKAMVGEAEKDKL- 119 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 Q ++L +++ + KN + K Sbjct: 120 -----------------------------DQTKEFKDRMEFLRERALHNEYFKNAIVDKI 150 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + ++ +K+ E R +L + + K Sbjct: 151 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEEAEA-----------IIKKLEGGAKFE 199 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICD 274 + + ++ S G Y E + P+F+ T P TQ G I + D Sbjct: 200 DLAKASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLED 259 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R + Q + + E VKKLR I Y Sbjct: 260 RRTKQP--PAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 299 >gi|148558977|ref|YP_001259765.1| peptidyl-prolyl cis-trans isomerase [Brucella ovis ATCC 25840] gi|148370234|gb|ABQ60213.1| peptidyl-prolyl cis-trans isomerase [Brucella ovis ATCC 25840] Length = 331 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 85/282 (30%), Gaps = 48/282 (17%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETLKKQEIEKSGIT 96 S++ TING+ IT G++ + L Q + A+ LI E EK + Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALAALIDIKAMAGEAEKDKL- 119 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 Q ++L +++ + KN + K Sbjct: 120 -----------------------------DQTKEFKDRMEFLRERALHNEYFKNAIVDKI 150 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + ++ +K+ E R +L + + K Sbjct: 151 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEEAEA-----------IIKKLEGGAKFE 199 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICD 274 + + ++ S G Y E + P+F+ T P TQ G I + D Sbjct: 200 DLAKASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLED 259 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R + Q + + E VKKLR I Y Sbjct: 260 RRTKQP--PAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 299 >gi|197116615|ref|YP_002137042.1| peptidylprolyl cis-trans isomerase lipoprotein, PpiC-type [Geobacter bemidjiensis Bem] gi|197085975|gb|ACH37246.1| peptidylprolyl cis-trans isomerase lipoprotein, PpiC-type [Geobacter bemidjiensis Bem] Length = 324 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 87/311 (27%), Gaps = 53/311 (17%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSR-------IRTTINGEVITDGDISKRIA----LLKL 65 T +L+ C+ + ++ + +NG ITD D K A LK Sbjct: 6 TAAVLLLALCVAATGCKQKAESEAKKGPGNGIVLAEVNGAKITDNDFYKEQAALPPYLKP 65 Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 E +K + ++V L Q+ +K GI + Sbjct: 66 MTETPEGKKEMLDTMVVRELILQQSKKEGIDSSAEVAAKL-------------------- 105 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + L + I +K + ++ A +K K IR Sbjct: 106 ----------EDLKKRVIVEAFLKKKVEESGNISDADMKAFYEKNKEKFQSGAQIRASHI 155 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 + + +K + G + + + P Sbjct: 156 LVKSEAEAKDIQ---------NQLKKGASFEELAKKHSIDGAAQKGGDLGWFSKGSMIPD 206 Query: 246 FQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEA 302 F+ + + T+ TQ G I R G +K + A P + ++ Sbjct: 207 FEKVAFGLKEGETSGIVKTQFGYHIIKKTGDRPAGARSFEDVKDQIKAAMVPERQQETFK 266 Query: 303 EYVKKLRSNAI 313 + +L+ NA Sbjct: 267 KLKDELKKNAK 277 >gi|317402408|gb|EFV82980.1| chaperone surA [Achromobacter xylosoxidans C54] Length = 517 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 27/289 (9%), Positives = 80/289 (27%), Gaps = 37/289 (12%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--------NGELEKIAVQEL 80 I ++ +VIT ++ + + + L+ +Q L Sbjct: 42 SAPPAAGEQFVDGIAAVVDKDVITLRELRDASQRIAGELKARGIQVPDDKTLQHQVLQRL 101 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I+E +++ E ++ GI D V+ A ++ ++K G+ + +++ L Sbjct: 102 IMERVQRHEADRLGIRVDDAQVDQAIATIAGRNKITVAQLRQEIEKSGVNWDSYRKSLKD 161 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-------------------- 180 + + + + E+ A + + Sbjct: 162 EIRSDRLRQRAVDSNIVISDAEVDAFLKDQRRNPAFAAAPQQAQPQPQPEAAPEQAAAPA 221 Query: 181 --------RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + ++ + + ++K+ +D R + + + G Sbjct: 222 GPMLYAVAQILVRVPEGSSPEQLAALRKKAEDLLARVKRGDDFASLAAASSDGPEALQGG 281 Query: 233 KAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 F + + + + + G + + D+ Sbjct: 282 VMGVRPLDGWPDLFAKAIANLQKGQISGLLQSGNGFHILKVMDRGTAQP 330 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 15/140 (10%), Positives = 43/140 (30%), Gaps = 2/140 (1%) Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + + ++ Q+ + + K + +++ G + Sbjct: 363 MQTHARHILIKTSTVMSDEQARQRLEQVRQRLVAGDAKFDDMARQYSQDATAPQGGDLGW 422 Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD-LGGEIALKAYLSAQNTP 294 L + P F+ + + P T G I + ++R + + Sbjct: 423 LNPGETVPPFEAAMNALKPGEISQPIQTPFGWHLIQVEERRQHDATDDLARMKARQTLFE 482 Query: 295 TKIEKHEAEYVKKLRSNAII 314 + + +++ +LR+ A I Sbjct: 483 RRAQPAFEDWLDQLRAQAYI 502 >gi|269467952|gb|EEZ79687.1| parvulin-like peptidyl-prolyl isomerase [uncultured SUP05 cluster bacterium] Length = 298 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 108/298 (36%), Gaps = 11/298 (3%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 + ++ I S S A + I +N ++IT IS I ++ L + I Sbjct: 4 LLLLIFIWSLNSLASPNSIIAIVNDDLITFDKISSEIKTSSTKEQKLAL----INRQIDL 59 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 L+ Q++++ G+ +N +N + A L+ + I +N Q Sbjct: 60 ALQLQKVKEVGVIPKNNAINIALKKVASQNNLTLTQLKNLPQFGEIVENITNQLSLRGLK 119 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL---QNQGFVQK 200 + K + L + + N K + + + + + SI +++ Sbjct: 120 QVVLKKANVKLTQVEISDALKKNSNDSKKLKQQIKIAQIAISSIDQTNSLLQSKDELIKQ 179 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN 259 + D + + + ++ + G++ +L + L P F+ +N + Sbjct: 180 FLLDLSDKINNGTSFSSLAKLYSQDPSYKNGGESGWLDKDRLPPIFKQNLQGLKKNELSK 239 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 P+ T +G I +KR++ A + AQ K +VK LR A I + Sbjct: 240 PFKTAQGWRIIKNINKRNV---DTHLASIKAQLIQKKKNTFFNSWVKGLREKAYIEIF 294 >gi|317153442|ref|YP_004121490.1| SurA domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316943693|gb|ADU62744.1| SurA domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 312 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 123/319 (38%), Gaps = 24/319 (7%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------- 65 + F+ + + S ++ +I +N ++IT ++ + + + Sbjct: 1 MPRCIFLFISLFLLVFSTNSLAVESVYDKILVKVNEDIITQYELDEEMRPILASIKGREL 60 Query: 66 ----QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 ++ +L + + ++ + L QEI+K IT ++ + GL+ E F Sbjct: 61 NEAEREQLADLRRQTLDRMVNDLLMTQEIKKFQITVTDTVIDDEIRRMKEERGLTDEAFE 120 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 + + G+ F+ L +++ K + EI A + ++ + E ++ Sbjct: 121 EMVKRDGLTIQEFRSKLKGLIEKQELLGYMVHSKVVVTDSEIEAEYEARRDNYLLEKMVG 180 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + +P + V+KRI D E + + + K++ S G + +D Sbjct: 181 LAILVLPADVSA--LEVRKRIMDGELTFDQ------AVLKYSVGPATDSGGSIGEVNWAD 232 Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIA---ICDKRDLGGEIALKAYLSAQNTPTKI 297 L +++ ++ Q P + + ++ I R + E ++ + + K Sbjct: 233 LADDWRDSIEGVKQGGVGTPVEVRGQMALLSPVTIASDRLVPLEE-VRDAIFERLMEGKR 291 Query: 298 EKHEAEYVKKLRSNAIIHY 316 E EY +KL+ +++I Y Sbjct: 292 ETIFDEYFEKLKQSSVITY 310 >gi|78045210|ref|YP_359073.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type [Carboxydothermus hydrogenoformans Z-2901] gi|77997325|gb|ABB16224.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type [Carboxydothermus hydrogenoformans Z-2901] Length = 337 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 39/334 (11%), Positives = 94/334 (28%), Gaps = 37/334 (11%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL-------- 65 K+ VL+ F + IV+ +NG+ I+ D +R A ++ Sbjct: 3 KITRVVAVLLTFVLALIVAGCG-----DYVAKVNGKTISKKDFDRRFAQVQADMKLRGVD 57 Query: 66 ------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 QK+ L++ + ++I E L + ++ I + + + + Sbjct: 58 LTSTEGQKMLQSLKQQTLDQMINEILISEYGKEKKIEPTKDEITNKINEIRAQFPSPQDF 117 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + D+ + + + + E++ K K + Sbjct: 118 EKALKDRNITDKDLQEMVRVQLINDKIYNEVTKGITVSEQEVKEYYEKHKNEPDFQTPEQ 177 Query: 180 IRTVL-------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + N + +K ++ + ++ + Sbjct: 178 RQVRHILIAVNDGNAQNNPHFNINVKRTDAEAKKLAEELIKQIKAGKDFATLAKEKSDDP 237 Query: 227 HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTN-PYVTQKGVEYIAICDKRDL--GGE 281 G ++ +F++ K + T P T G I + Sbjct: 238 GVKENGGQYTFSRGEMVKEFEDAAFALKKPGDITETPVKTAFGYHIIKLEKIIPARQKTY 297 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 +K L K + ++++ L+ A I Sbjct: 298 EEVKEQLKNYLLEKKKREAYNKFLEDLKKKAKIE 331 >gi|306843392|ref|ZP_07475993.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. BO1] gi|306276083|gb|EFM57783.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. BO1] Length = 331 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 85/282 (30%), Gaps = 48/282 (17%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETLKKQEIEKSGIT 96 S++ TING+ IT G++ + L Q + A+ LI E EK + Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFSRLPVEQRRLAALAALIDIKAMAGEAEKDKL- 119 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 Q ++L +++ + KN + K Sbjct: 120 -----------------------------DQTKEFKDRMEFLRERALHNEYFKNAIVDKI 150 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + ++ +K+ E R +L + + K Sbjct: 151 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEEAEA-----------IIKKLEGGAKFE 199 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICD 274 + + ++ S G Y E + P+F+ T P TQ G I + D Sbjct: 200 DLAKASSTDGTASSGGDLGYFTEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLED 259 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R + Q + + E VKKLR I Y Sbjct: 260 RRTKQP--PAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 299 >gi|53804280|ref|YP_114087.1| peptidyl-prolyl cis-trans isomerase family protein [Methylococcus capsulatus str. Bath] gi|53758041|gb|AAU92332.1| peptidyl-prolyl cis-trans isomerase family protein [Methylococcus capsulatus str. Bath] Length = 325 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 80/280 (28%), Gaps = 50/280 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +NG IT ++ + L ++ E+ V EL+ L +Q+ +T + Sbjct: 46 VAVVNGTAITKAEVGAIKSELAQRRSGEVSEEKIVDELVKRELLRQDAVAKQLTKNPEYQ 105 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 A + I + DFM + E Sbjct: 106 ARI-------------------------------DNAERVILSQIAAEDFMKNLTISDEE 134 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + R + ++ ++ + K + +KF Sbjct: 135 LQKEYDSRIGAMQRAEYRARHILVDKEDVAKDI----------IAKLGKGAKFEDLAKKF 184 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRD-- 277 + + G+ + + F + + K T P TQ G I + R+ Sbjct: 185 SKDPGSNNEGGELGWFSPQQMVQPFSEAVEKLKNGEITQVPVQTQFGWHVIQREESRESA 244 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 A+K + + K+ + Y+ L + A + + Sbjct: 245 PPAFDAVKEQIKSMLQTQKLHQ----YIDDLMAKAKVERF 280 >gi|306842909|ref|ZP_07475545.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. BO2] gi|306286932|gb|EFM58452.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. BO2] Length = 331 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 85/282 (30%), Gaps = 48/282 (17%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETLKKQEIEKSGIT 96 S++ TING+ IT G++ + L Q + A+ LI E EK + Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALAALIDIKAMAGEAEKDKL- 119 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 Q ++L +++ + KN + K Sbjct: 120 -----------------------------DQTKEFKDRMEFLRERALHNEYFKNAIVDKI 150 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + ++ +K+ E R +L + + K Sbjct: 151 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEEAEA-----------IIKKLEGGAKFE 199 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICD 274 + + ++ S G Y E + P+F+ T P TQ G I + D Sbjct: 200 DLAKASSTDGTASSGGDLGYFTEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLED 259 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R + Q + + E VKKLR I Y Sbjct: 260 RRTKQP--PAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 299 >gi|262375382|ref|ZP_06068615.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter lwoffii SH145] gi|262309636|gb|EEY90766.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter lwoffii SH145] Length = 440 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 27/317 (8%), Positives = 99/317 (31%), Gaps = 21/317 (6%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 + +K + L + + ++ + ++ +I D+++ +A + Q Sbjct: 8 TKQLKQIFKATALALCLSSAMTTFAVAQPKDEVVAVVDNSIILRSDLAQGVAEISHQLQK 67 Query: 70 GE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AED 119 + LE+ A+++LI+ + +++++ I D +N ++ AR++G Sbjct: 68 QKKAVPPQQYLEQQALEQLIIRQAQLEQVKRYNIRPDEKALNEAVLKVARDSGSPSLEAF 127 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + +A + + + + ++ + + Sbjct: 128 QQKLDAMAPNTYASLRNRIAEDLALNRLRQQIVTSRIQITDQDVKNFLNTPQGQALLGSQ 187 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + + + ++ ++ +K+++ V Sbjct: 188 VHVLH------LRVSGENAEQIATQVKQELNSSNDIQAIGKKYSTGGVKVEAADMGVRNL 241 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTP 294 S++ + + T+ GV + + +++ L ++ Q + Sbjct: 242 SEIPAELAARVTTLQPGQTSELIPVADGVHVLKLLERKGGEQKALVPQYLTRHILIQPSE 301 Query: 295 TKIEKHEAEYVKKLRSN 311 ++ + + L + Sbjct: 302 VVSPENAKQMIDSLYNR 318 Score = 84.7 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 31/269 (11%), Positives = 87/269 (32%), Gaps = 8/269 (2%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 ITD D+ + + Q + G + + + +Q + +S+ + Sbjct: 166 ITDQDVKNFLNTPQGQALLGS-QVHVLHLRVSGENAEQIATQVKQELNSSNDIQAIGKKY 224 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 G+ E + + + P + G +++ K Sbjct: 225 STGGVKVEAADMGVRNLSEIPAELAARVTT--LQPGQTSELIPVADGVHVLKLLERKGGE 282 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + V +YL R +L +++ + ++ I + F++ Sbjct: 283 QKALVPQYLTRHILIQP--SEVVSPENAKQMIDSLYNRLKQGEDFTVLASTFSNDTGSAR 340 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 G ++ + P+F+ +K + + P+ +Q G + + + R + + Sbjct: 341 DGGSLGWVSPGVMVPEFEQQMKSTPVGQFSKPFQSQFGWHILQVSETRQQDMTQEYQERM 400 Query: 289 -SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + ++++ R+NA + Sbjct: 401 ARQLLSERQFDAELDSWLRETRNNAYVEI 429 >gi|23502793|ref|NP_698920.1| peptidyl-prolyl cis-trans isomerase [Brucella suis 1330] gi|163843966|ref|YP_001628370.1| parvulin-like PPIase precursor [Brucella suis ATCC 23445] gi|23348814|gb|AAN30835.1| peptidyl-prolyl cis-trans isomerase [Brucella suis 1330] gi|163674689|gb|ABY38800.1| Parvulin-like PPIase precursor [Brucella suis ATCC 23445] Length = 331 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 85/282 (30%), Gaps = 48/282 (17%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETLKKQEIEKSGIT 96 S++ TING+ IT G++ + L Q + A+ LI E EK + Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALAALIDIKAMAGEAEKDKL- 119 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 Q ++L +++ + KN + K Sbjct: 120 -----------------------------DQTKEFKDRMEFLRERALHNEYFKNAIVDKI 150 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + ++ +K+ E R +L + + K Sbjct: 151 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEEAEA-----------IIKKLEGGAKFE 199 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICD 274 + + ++ S G Y E + P+F+ T P TQ G I + D Sbjct: 200 DLAKASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLED 259 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R + Q + + E VKKLR I Y Sbjct: 260 RRTKQP--PAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 299 >gi|83953128|ref|ZP_00961850.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. NAS-14.1] gi|83842096|gb|EAP81264.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. NAS-14.1] Length = 280 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 74/281 (26%), Gaps = 50/281 (17%) Query: 38 MSSRIRTTINGEVITD-GDISKRIAL--LKLQKINGELEKIAVQELIVETLKKQEIEKSG 94 + + T+NG IT I R L Q L K + +L+ +T Sbjct: 26 TAETVVATVNGTDITIGSMIIARATLPEQYQQLPPEVLFKGILDQLVQQTAL-------- 77 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 F + + Q I +V++ Sbjct: 78 -------------------------SQDFDGEVPKRIEMALENERRQLIAGEVIEKAMAQ 112 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 E++ ++ E+ +L ++ + ++ Sbjct: 113 DVTEEELQAAYDEAYADAEPTEEFSASHIL-----------VETEEEAQAVKKELDEGAD 161 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC 273 ++ ++ + G + + P F+ + + P TQ G I + Sbjct: 162 FAELAKEKSTGPSGPAGGTLGWFGPGMMVPAFETAVAALEVGAVSEPVETQFGWHVIKLD 221 Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 DKR E + + + ++K A + Sbjct: 222 DKRQK--EAPKLEDVKDELETQVRQVKAQTLIEKTTEAADV 260 >gi|161619861|ref|YP_001593748.1| chaperone surA precursor [Brucella canis ATCC 23365] gi|254704953|ref|ZP_05166781.1| chaperone surA precursor [Brucella suis bv. 3 str. 686] gi|260567571|ref|ZP_05838041.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 4 str. 40] gi|261755654|ref|ZP_05999363.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 3 str. 686] gi|161336672|gb|ABX62977.1| Chaperone surA precursor [Brucella canis ATCC 23365] gi|260157089|gb|EEW92169.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 4 str. 40] gi|261745407|gb|EEY33333.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 3 str. 686] Length = 331 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 85/282 (30%), Gaps = 48/282 (17%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETLKKQEIEKSGIT 96 S++ TING+ IT G++ + L Q + A+ LI E EK + Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALAALIDIKAMAGEAEKDKL- 119 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 Q ++L +++ + KN + K Sbjct: 120 -----------------------------DQTKEFKDRMEFLRERALHNEYFKNAIVDKI 150 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + ++ +K+ E R +L + + K Sbjct: 151 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEEAEA-----------IIKKLEGGAKSE 199 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICD 274 + + ++ S G Y E + P+F+ T P TQ G I + D Sbjct: 200 DLAKASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLED 259 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R + Q + + E VKKLR I Y Sbjct: 260 RRTKQP--PAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 299 >gi|149917238|ref|ZP_01905737.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Plesiocystis pacifica SIR-1] gi|149821845|gb|EDM81239.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Plesiocystis pacifica SIR-1] Length = 441 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 89/306 (29%), Gaps = 37/306 (12%) Query: 43 RTTINGEVITDGDISKRIALLKLQ-----------KINGELEKIAVQELIVETLKKQEIE 91 +N VIT G++ I LKLQ + K V LI + + +QE + Sbjct: 46 VAKVNDVVIT-GELFHSIYDLKLQKYADRNRDIPKTADRRYRKSIVDRLIYQEILRQEAK 104 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 K Q +D+ L ++G + +Q + + V++ D Sbjct: 105 KR----SIAYDKAELQQREDAQKRGIKDWEKHLRRRGESEESLRQLYVAELLERAVLEAD 160 Query: 152 FMLKYGNLEME-IPANKQKMKNITVREYLIRTVLFSIPDNKLQ----------------- 193 L + E+ + R +L + + Sbjct: 161 GKLAVTDEEIAGEYEKVKPNYTKDKERVRARHILIRVGPEQKPAPGEPVPEPTEAQKKEW 220 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK- 252 + ++K + ++ + + G + +F + Sbjct: 221 EEAALKKAEEIYAKASAEGADFAQLAIELSEGPSARKGGDLGIFAADRMVEEFSDAAFTL 280 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + P T+ G I + K G AL+ L + + K+ + + + L Sbjct: 281 EPGEVSKPVKTKFGFHIIKVEGKYAPGELPIEALEDQLRERLSARKLHQGRRDLKESLLE 340 Query: 311 NAIIHY 316 + + Sbjct: 341 SYAVEN 346 >gi|225853381|ref|YP_002733614.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis ATCC 23457] gi|254694570|ref|ZP_05156398.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 3 str. Tulya] gi|254700583|ref|ZP_05162411.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 5 str. 513] gi|254707533|ref|ZP_05169361.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella pinnipedialis M163/99/10] gi|254713643|ref|ZP_05175454.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti M644/93/1] gi|254716003|ref|ZP_05177814.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti M13/05/1] gi|256045546|ref|ZP_05448429.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 1 str. Rev.1] gi|256112274|ref|ZP_05453195.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 3 str. Ether] gi|256158440|ref|ZP_05456338.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti M490/95/1] gi|256253860|ref|ZP_05459396.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti B1/94] gi|256263138|ref|ZP_05465670.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 2 str. 63/9] gi|256370345|ref|YP_003107856.1| peptidyl-prolyl cis-trans isomerase [Brucella microti CCM 4915] gi|260169365|ref|ZP_05756176.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. F5/99] gi|260562856|ref|ZP_05833342.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 1 str. 16M] gi|261214896|ref|ZP_05929177.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 3 str. Tulya] gi|261217772|ref|ZP_05932053.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti M13/05/1] gi|261220998|ref|ZP_05935279.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti B1/94] gi|261315013|ref|ZP_05954210.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella pinnipedialis M163/99/10] gi|261321380|ref|ZP_05960577.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti M644/93/1] gi|261751092|ref|ZP_05994801.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 5 str. 513] gi|261758885|ref|ZP_06002594.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella sp. F5/99] gi|265991973|ref|ZP_06104530.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 1 str. Rev.1] gi|265993706|ref|ZP_06106263.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 3 str. Ether] gi|265996958|ref|ZP_06109515.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti M490/95/1] gi|294851184|ref|ZP_06791857.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella sp. NVSL 07-0026] gi|225641746|gb|ACO01660.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis ATCC 23457] gi|256000508|gb|ACU48907.1| peptidyl-prolyl cis-trans isomerase [Brucella microti CCM 4915] gi|260152872|gb|EEW87964.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 1 str. 16M] gi|260916503|gb|EEX83364.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 3 str. Tulya] gi|260919582|gb|EEX86235.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti B1/94] gi|260922861|gb|EEX89429.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti M13/05/1] gi|261294070|gb|EEX97566.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti M644/93/1] gi|261304039|gb|EEY07536.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella pinnipedialis M163/99/10] gi|261738869|gb|EEY26865.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella sp. F5/99] gi|261740845|gb|EEY28771.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 5 str. 513] gi|262551426|gb|EEZ07416.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti M490/95/1] gi|262764687|gb|EEZ10608.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 3 str. Ether] gi|263003039|gb|EEZ15332.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 1 str. Rev.1] gi|263093040|gb|EEZ17190.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 2 str. 63/9] gi|294819773|gb|EFG36772.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella sp. NVSL 07-0026] gi|326409944|gb|ADZ67009.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis M28] gi|326539657|gb|ADZ87872.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis M5-90] Length = 331 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 85/282 (30%), Gaps = 48/282 (17%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETLKKQEIEKSGIT 96 S++ TING+ IT G++ + L Q + A+ LI E EK + Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALAALIDIKAMAGEAEKDKL- 119 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 Q ++L +++ + KN + K Sbjct: 120 -----------------------------DQTKEFKDRMEFLRERALHNEYFKNAIVDKI 150 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + ++ +K+ E R +L + + K Sbjct: 151 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEEAEA-----------IIKKLEGGAKFE 199 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICD 274 + + ++ S G Y E + P+F+ T P TQ G I + D Sbjct: 200 DLAKASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLED 259 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R + Q + + E VKKLR I Y Sbjct: 260 RRTKQP--PAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 299 >gi|149202954|ref|ZP_01879925.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseovarius sp. TM1035] gi|149143500|gb|EDM31536.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseovarius sp. TM1035] Length = 283 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 76/303 (25%), Gaps = 52/303 (17%) Query: 16 LTTYFVLIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRIALLKLQK---INGE 71 L + L+ + ++ + + T+ G IT G + A L Q Sbjct: 5 LLSTAALVSGLAIGAQAFAQDTPSAETVMATVGGTDITLGHMLAVRASLPAQYDQVPPEA 64 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L K + +LI + L Q E Sbjct: 65 LFKGVLDQLIQQELLSQAHEGDLSR---------------------------------AA 91 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + DV + ++ + Q EY +L Sbjct: 92 ALQLENERRAVLAADVAEEVVNADLTEERLQAAYDAQYAGAEDETEYKAAHIL------- 144 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLL 250 ++ ++ ++ + S G + + + F + Sbjct: 145 ----VETEEAAQNLVIELEGGANFAALAQEHSIGPSGPSGGDLGWFGDGVMVPEFFAAVA 200 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + P TQ G I + + R E + + T T ++ ++ R Sbjct: 201 ALDVGAVSAPIQTQFGWHVIQLNETR--IKERPTLDGVRDELTNTLRQEAFDAFIAA-RE 257 Query: 311 NAI 313 A Sbjct: 258 AAT 260 >gi|283856448|ref|YP_163047.2| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis subsp. mobilis ZM4] gi|283775452|gb|AAV89936.2| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis subsp. mobilis ZM4] Length = 435 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 47/291 (16%), Positives = 97/291 (33%), Gaps = 21/291 (7%) Query: 44 TTINGEVITDGDISKRIALLKLQ----------KINGELEKIAVQELIVETLKKQEIEKS 93 +NG +IT+ DI +R AL+ + ++ LI ETL+ QE + + Sbjct: 37 AIVNGTIITNTDIEQRFALILASAGGDVSRISEEDRNMARLQILRNLIDETLEIQEAKAN 96 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 I ++ F +ARN + E FS+ L G K+ + W ++ Sbjct: 97 DIIITPTELDQIFEHYARNMKKTPEAFSADLQAIGSSAKSVKRQVEADMAWRRLLGRRVE 156 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL--- 210 E+ +MK ++ +F ++ + + + + + Sbjct: 157 PFVNISNEEVQNIINRMKAAKGKDEYHIAEIFFSANDTNRAEVRAKANKIQDQILQRGNT 216 Query: 211 --RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGV 267 R+ +++ G ++ L ++K + P T G Sbjct: 217 NERMGLFSAFASQYSEASSAARGGDMGFIQAEQLPDALAAVVKNMPVGSLMGPIETPGGF 276 Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKI-----EKHEAEYVKKLRSNAI 313 +A+ +K+ + G A ++ + + E KLR Sbjct: 277 SIVALLEKQQILGIDPKDAIVALKQIYVNFPPGTSQNVADEKTAKLRDATK 327 Score = 45.8 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVT-QKGVEYIAICDKRDLGG-EIALKAYLSAQNT 293 + + P QN++ K +T P+ + Q+GV + +C + D + + Q Sbjct: 352 ISIRSMPPLLQNMVAKLQVGESTLPFGSIQEGVSVLVVCGRDDPKVAKQPNFQQIHNQLQ 411 Query: 294 PTKIEKHEAEYVKKLRSNAIIHY 316 ++ K Y++ LR +AII Y Sbjct: 412 EDRVNKRAIRYLRDLRRDAIIDY 434 >gi|254503520|ref|ZP_05115671.1| SurA N-terminal domain family [Labrenzia alexandrii DFL-11] gi|222439591|gb|EEE46270.1| SurA N-terminal domain family [Labrenzia alexandrii DFL-11] Length = 314 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 110/278 (39%), Gaps = 3/278 (1%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIEKSGITFDS 99 I+ +N ITD DI++R L+ L + AVQELI + +K E + G++ Sbjct: 36 IKVIVNDVPITDYDITQRARLITLTLRKSASVARREAVQELIDDQVKVGEATRMGMSVSD 95 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + V+ + ARN L+ + L + G+ K+ L Q IW +V+ F Sbjct: 96 SEVDNAYANIARNVKLTPARLTQALGQGGVRAETLKKRLRAQLIWGKLVRARFSGGVDVD 155 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 E +I A +K + + I + + + + + C + Sbjct: 156 ESDIIAALRKTDEEDRATSIEYDLQRVIVVVPKNSSNGFKSQRRREIAQMRKAVSSCEDM 215 Query: 220 EKFASKIHDVSIGKAQYLLESDLHP-QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 + +V + LE+++ P + K T+P T G E IAIC KR++ Sbjct: 216 GSVLGQYKEVVVQPIGRRLETEIPPNIIDQVKKLGPGKLTDPNPTPVGFEMIAICGKREI 275 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +IA++ L + + E + + + I Y Sbjct: 276 QSDIAMRTKLENELRAKEGESQARRLLMDAKRRSTIIY 313 >gi|218960354|ref|YP_001740129.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase precursor [Candidatus Cloacamonas acidaminovorans] gi|167729011|emb|CAO79922.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase precursor [Candidatus Cloacamonas acidaminovorans] Length = 418 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 35/290 (12%), Positives = 92/290 (31%), Gaps = 16/290 (5%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKL--QKINGELEKIAVQELIVETLKKQEIEK 92 S + +I + ++I D+ K + ++ + + E+I + L Q+ + Sbjct: 18 SAELIDKIVAKVGTDIILLSDLQKEMVQMQSVGLLEEDTDPRDVLDEMINQKLIIQKAKD 77 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-------FKQYLAIQSIWP 145 IT + + + + S+F ++ L Q++ Sbjct: 78 LNITVNDEEIKVMAENYLKKVKAQYPSSSAFAADLKKSKLTESDLLQLYRDILTEQALSD 137 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++K + + K E E+ K+ ++F +++ IK Sbjct: 138 QILKKEIINKVSVTEAEVINFYNATKDSLAVKPVSWDLGIIFREIKPNQKSKEAKLAEIK 197 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYV 262 + + + G + + F++ Q ++ Sbjct: 198 EIQTRLKNGEDFATLASTESDCPSKEVGGDLGFFKRGQMVKPFEDAAFALQLGEISDIVE 257 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA-EYVKKLRSN 311 ++ G I + +KR G ++ TPT + + ++++R+ Sbjct: 258 SEYGYHIIRLEEKR---GNEIRARHILKALTPTAEDSLRERQLMEEIRNR 304 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 29/276 (10%), Positives = 77/276 (27%), Gaps = 7/276 (2%) Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 IN +T+ ++ I K + ++ ++ I+ K + Sbjct: 144 IINKVSVTEAEV---INFYNATKDSLAVKPVSWDLGIIFREIKPNQKSKEAKLAEIKEIQ 200 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 +++ + A S K+ GD F + + + D + + ++ Sbjct: 201 TRLKNGEDFATLASTESDCPSKEVGGDLGFFKRGQMVKPFEDAAFALQLGEISDIVESEY 260 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + + ++ ++ +++ + + +++ Sbjct: 261 GYHIIRLEEKRGNEIRARHILKALTPTAEDSLRERQLMEEIRNRYAKGESFASLAREYSM 320 Query: 225 KI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG---G 280 G E DL F + ++ P + +G+ YI K Sbjct: 321 DQESREDGGSLGEFTERDLPSLFATQILQTPVGEMTPVLENQGMLYIFCRLKEYPPRIYK 380 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +K K +++ LR A + Sbjct: 381 YEEVKDQAREMVLKRKQIDAFNAWIENLRREAYVQI 416 >gi|262166048|ref|ZP_06033785.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio mimicus VM223] gi|262025764|gb|EEY44432.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio mimicus VM223] Length = 619 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 32/403 (7%), Positives = 92/403 (22%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y + + + I+ GD + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYL-ISGGNNAAAKVGNAEISRGDFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q G+ + V Sbjct: 60 QNERNRMQAQLGDYFSNLLADPTYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDDQVRQ 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 Q E + + L + G + F +YL + ++ Sbjct: 120 MILEMPQFQSQGKFDQELYQAALRRAGFTPDMFAEYLRKDLVRNQLMTALQGSEFSLPGE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 +F K + +I + R ++ Sbjct: 180 VNLQDQLISQTRDIRTITLSLAEFAKKVTLSDEDIEQYYKANTERFTRPEQVKVSYVELS 239 Query: 185 ---------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK----------- 218 L ++R + Sbjct: 240 ADALKAEIAIDDEAAQQYYHEHLDKYSSAEQRKVSHILIEGDDEQKAQAILDELNAGADF 299 Query: 219 ---LEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ + + + G I + Sbjct: 300 TTVAKEKSQDVGSAQDGGSLGWIERDTMDPAFEAAAYALTEKGQISGLVKSDFGYHIIRL 359 Query: 273 CDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 D + + + + + + +L A Sbjct: 360 DDVKAPVVKPYTEVAQAIKQELVDQQALDSFYAKQSELEKLAF 402 >gi|258621306|ref|ZP_05716340.1| peptidyl-prolyl cis-trans isomerse D [Vibrio mimicus VM573] gi|258586694|gb|EEW11409.1| peptidyl-prolyl cis-trans isomerse D [Vibrio mimicus VM573] Length = 619 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 31/403 (7%), Positives = 98/403 (24%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y + + + I+ GD + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYL-ISGGNNAAAKVGNAEISRGDFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q G+ + V Sbjct: 60 QNERNRMQAQLGDYFSNLLADPTYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDDQVRQ 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 Q E + + L + G + F +YL + ++ Sbjct: 120 MILEMPQFQSQGKFDQELYQAALRRAGFTPDMFAEYLRKDLVRNQLMTALQGSEFSLPGE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +F K + +I + R ++ + Sbjct: 180 VNLQDQLISQTRDIRTLTLSLAEFAKKVTLSDEDIEQYYKANTERFTRPEQVKVSYVELS 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 + L+ + + +++ + + Sbjct: 240 ADALKAEIAIDDEAAQQYYQEHLDKYSSAEQRKVSHILIEGDDEQKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ + + + G I + Sbjct: 300 TTVAKEKSQDVGSAQDGGSLGWIERDTMDPAFEAAAYALTEKGQISGLVKSDFGYHIIRL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 D + + + + + + +L A Sbjct: 360 DDVKAPVVKPYTEVAQAIKQELVDQQALDSFYAKQSELEKLAF 402 >gi|86138690|ref|ZP_01057263.1| PPIC-type PPIASE domain protein [Roseobacter sp. MED193] gi|85824750|gb|EAQ44952.1| PPIC-type PPIASE domain protein [Roseobacter sp. MED193] Length = 396 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 97/266 (36%), Gaps = 6/266 (2%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET 84 F + + T++ IT ++++R + + + G+ E +A QELI + Sbjct: 5 FALSTTAVPLAAQGLFSPAVTVDNAAITYYELNQRALFMGVLRTPGDPEVMARQELIKDR 64 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 LK E+ K GI+ + + A LS +F + L + GI + + + W Sbjct: 65 LKLAELAKVGISPSEEEITAGMTELASRANLSLNEFLTVLKQNGIDPETVRDFTKVGIGW 124 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 + + F+ + E EI + + V+ L ++ + + + D Sbjct: 125 REYIGARFLSRARPTEAEIDRAMGQAGSGGVQVLLSELIVPI-----NEQNAQQVEALTD 179 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 + ++++ + G+ ++ + L PQ Q ++ T P Sbjct: 180 QVGQLTSFAAFSSAATQYSASDSRNNGGRLPWMNLTKLPPQLQPVVLALDPGEITEPLPL 239 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLS 289 Q V + R++ G + + Sbjct: 240 QGAVAMFQMRGVREVTGSRQRYSAIE 265 Score = 38.9 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 25/46 (54%) Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + +C + GE + ++ T ++E + ++++LR++A+I Sbjct: 348 LLMLCGRTAELGEGESRETVANALTQQRLESLSSSFIEQLRADALI 393 >gi|292489392|ref|YP_003532279.1| survival protein SurA [Erwinia amylovora CFBP1430] gi|292898389|ref|YP_003537758.1| survival protein A [Erwinia amylovora ATCC 49946] gi|291198237|emb|CBJ45343.1| chaperone (peptidyl-prolyl cis-trans isomerase) (survival protein A) [Erwinia amylovora ATCC 49946] gi|291554826|emb|CBA22684.1| survival protein SurA precursor [Erwinia amylovora CFBP1430] Length = 431 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 30/309 (9%), Positives = 107/309 (34%), Gaps = 16/309 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGEL 72 +++ + ++ + + ++ +N V+ + D+ + +K Q + L Sbjct: 7 LILGAALTASTAFAAPQVVDKVAAVVNNGVVLESDLDSMMQSVKGQAQQAGQQLPDDRTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ L+++ + Q+ +++G+ ++ A+ +S + S L G+ Sbjct: 67 RHQILERLVMDNILLQKAKQAGLQVSDAQLDQAIANIAQQNKMSIDQLRSRLAYDGMNYA 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +++ + + +V ++ + L E+ + ++ + + +P + Sbjct: 127 SYREQIRKEMATSEVRNSEVRRRVTILPQEVDSLASQLASQNSAGTELNISHILLPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 Q V + A++ ++ + G + +L F Sbjct: 187 PTQQQVDDQENLAKQLVSEAKGGADFGKLAIAHSADPQALKGGNMGWGRIQELPSLFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + + P + G + + D R + ++ + +P + + Sbjct: 247 LVTAKKGDIIGPVRSGVGFHILKVNDMRGDNQSISVTEVHARHILLKPSPIMTDDQARQK 306 Query: 305 VKKLRSNAI 313 ++++ S+ Sbjct: 307 LQQVASDIK 315 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 56/168 (33%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + ++I+V E R +L +Q QK + A + + Sbjct: 259 VRSGVGFHILKVNDMRGDNQSISVTEVHARHILLKPSPIMTDDQA-RQKLQQVASDIKSG 317 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEY 269 ++ + G + P F++ L + + +P + G Sbjct: 318 KLTFSAAAKQLSQDPGSANQGGDLGWSSAEVFDPAFRDALLRLKKGQIGDPVHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R+ A + Sbjct: 378 IELMDTRKVDKTDAAKKERAYRLLFNRKFAEEAQTWMQEERAAAYVKI 425 >gi|91228613|ref|ZP_01262531.1| peptidyl-prolyl cis-trans isomerse D [Vibrio alginolyticus 12G01] gi|269965576|ref|ZP_06179690.1| peptidyl-prolyl cis-trans isomerse D [Vibrio alginolyticus 40B] gi|91187845|gb|EAS74159.1| peptidyl-prolyl cis-trans isomerse D [Vibrio alginolyticus 12G01] gi|269829801|gb|EEZ84036.1| peptidyl-prolyl cis-trans isomerse D [Vibrio alginolyticus 40B] Length = 619 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 40/406 (9%), Positives = 102/406 (25%), Gaps = 92/406 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY ++ + I G+ Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYIVGGSNNS-AAKVGNTEIPRGEFEMAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + +I + L Q+ E G+ V Sbjct: 60 QNERNRMQAQLGDYFSQMLADPAYVESFRKSVLDRMINDVLLDQQAEALGLRISDTQVRS 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 Q N E + + L + G + F +Y+ + + ++ Sbjct: 120 MILDMPQFQSNGQFDQEIYQASLRRAGFSPDSFAEYMRRELVREQLLNALQNSEFILPGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +F + EI + + R ++ + Sbjct: 180 VQAEGKLFTQTRDIRTIQIDLAEFAKNIELTDEEIQEYYKANPDNFTRPEQVKVSYIELS 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 L+ Q V + + + + Sbjct: 240 AEALKEQVNVSDAEVKKYYDEHLNKYSSEEQRRVAHILVEGDDEAKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ K+ +T+ + G I + Sbjct: 300 ATLAQEKSDDFGSAENGGDLGWIERDVMDPAFEEAAFALKNPGDTSGLVKSDFGYHIIKL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +D + A + + + E +L A Y Sbjct: 360 EELKDSVAKPFEEVAAEIKQEMVDQQAIDQFYELQNELERVAF-EY 404 >gi|304392008|ref|ZP_07373950.1| survival protein SurA [Ahrensia sp. R2A130] gi|303296237|gb|EFL90595.1| survival protein SurA [Ahrensia sp. R2A130] Length = 343 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 63/282 (22%), Positives = 106/282 (37%), Gaps = 8/282 (2%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 RI +N IT DI++R ++L+++ G IA ELI E +K +E + Sbjct: 61 RIAVLVNETPITSTDIARRAKFVRLRRMKGNATTIATNELIDEAIKMKEARRINAVASDA 120 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL- 159 V+ + A+N L+ L + G FK Y+ W V + + Sbjct: 121 EVSSAYAGFAKNNKLTQPQLGQVLSRSGTTVRGFKDYIRASLSWQRAVGSRMRAEASGRG 180 Query: 160 ---EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 E + T+ + +G + R A + R R+ Sbjct: 181 GLGEKAKGPRFLSSAGTQGAKEGEYTLQQIVFVVPSDKRGQLSARRAQANQFRTRMNGC- 239 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 + A + DVS+ LL+S L PQ+ + + S+ T T KGVE +A+C K Sbjct: 240 TNALELAKSLRDVSVRDRGRLLDSQLPPQWAKEIRALSEGGVTRTKDTDKGVEMLALCRK 299 Query: 276 RD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 R+ N + + E +Y+ +L+ A I Sbjct: 300 REVRASTSSTSADLFGGANFAEQQSETEKKYLAELKERATIQ 341 >gi|290510114|ref|ZP_06549484.1| peptidyl-prolyl cis-trans isomerase D [Klebsiella sp. 1_1_55] gi|289776830|gb|EFD84828.1| peptidyl-prolyl cis-trans isomerase D [Klebsiella sp. 1_1_55] Length = 624 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 41/396 (10%), Positives = 108/396 (27%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y + +NG+ I G + Sbjct: 1 MMDNLRTAANSVVLKIIFGIIIVSFILTGVSGYLIGGGKNY-AAKVNGQEIGRGQFENAV 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 A + + + + + LI E+L Q + G++ V Sbjct: 60 ASERNRMQQQLGDQFSELAANENYMKTMRQQVLNRLIDESLLDQYARELGLSISDEQVKQ 119 Query: 105 FFVQHAR---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 Q N + FS + + G+ + + Q L Q ++ Sbjct: 120 AIFQTQAFQTNGKFDNQRFSGIVAQMGMTTDQYAQALRNQLTTQQLINAIAGTDFMLPGE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K + EI A Q+ + + R + Sbjct: 180 SDQLAALVSQQRVVREATINVNALAAKQTVSDEEINAFWQQNQARFMAPEQFRVSYIKMD 239 Query: 189 DNKLQNQGFVQKRIKDAEESRLRL-----------------------------PKDCNKL 219 +Q ++ ++ + + Sbjct: 240 AASMQESASDEEIQSWYDQHKDQFTQPQRNRYSVIQTKTEADAKAVLAELQKGADFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G ++ E+ P+ ++ + + + G + D + Sbjct: 300 KEKSTDIISARNGGDMGWMEEASTVPELKDAGLNEKGQLSGVIKSSVGFLVARLDDVQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 QVKPLADVRNDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|254457621|ref|ZP_05071049.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Campylobacterales bacterium GD 1] gi|207086413|gb|EDZ63697.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Campylobacterales bacterium GD 1] Length = 275 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 94/299 (31%), Gaps = 40/299 (13%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK-------INGELEKIAVQE 79 IV + S +S+ T+NG IT D+ + + E K +++ Sbjct: 7 IVATLLLTSTLVSATTLITVNGTQITQQDVDTALMNATQGRFNQVPAEKQAEFRKQVLEQ 66 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 LI + L + +K+G+ + + F R Sbjct: 67 LIAKELVFGDAQKTGVLNSKDFKDEFVQVQERVKKE------------------------ 102 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + V + + K + E+ K K+ + + + + Sbjct: 103 ---LAIQVWQKQQLDKVEVSDKELKNYYDKNKDEFNEKETVHARHILVKTEEEAKNIVKS 159 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTT 258 + E + + + + ++ G Y + + P+F + + + Sbjct: 160 LKSLKGEALKAKF---IEEAKAKSTGPSGPKGGDLGYFAQGQMVPEFNDKVFGMKVGTVS 216 Query: 259 NPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 P TQ G I + DK + +K+++ + K + + + +L++ A I Sbjct: 217 EPVKTQFGYHVIYLEDKKAKKTLAFTEVKSFIEQRLKMEKFKVVMQDKMLELKNKATIK 275 >gi|262171087|ref|ZP_06038765.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio mimicus MB-451] gi|261892163|gb|EEY38149.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio mimicus MB-451] Length = 619 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 31/403 (7%), Positives = 97/403 (24%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y + + + I+ GD + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYL-ISGGNNAAAKVGNAEISRGDFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q G+ V Sbjct: 60 QNERNRMQAQLGDYFSNLLADPTYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDGQVRQ 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 Q E + + L + G + F +YL + ++ Sbjct: 120 MILEMPQFQSQGKFDQELYQAALRRAGFTPDMFAEYLRKDLVRNQLMTALQGSEFSLPGE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +F K + +I + R ++ + Sbjct: 180 VNLQDQLVSQTRDIRTITLSLAEFAKKVTLSDEDIEQYYKANTERFTRPEQVKVSYVELS 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 + L+ + + +++ + + Sbjct: 240 ADALKAEIAIDDEAAQQYYQEHLDKYSSAEQRKVSHILIEGDDEQKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ + + + G I + Sbjct: 300 TTVAKEKSQDVGSAQDGGSLGWIERDTMDPAFEAAAYALTEKGQISGLVKSDFGYHIIRL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 D + + + + + + +L A Sbjct: 360 DDVKAPVVKPYTEVAQAIKQELVDQQALDSFYAKQSELEKLAF 402 >gi|114766150|ref|ZP_01445154.1| PPIC-type PPIASE domain [Pelagibaca bermudensis HTCC2601] gi|114541610|gb|EAU44652.1| PPIC-type PPIASE domain [Roseovarius sp. HTCC2601] Length = 408 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 97/271 (35%), Gaps = 5/271 (1%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 +LL + + T++ VIT +I +R ++ L G + Sbjct: 5 RLLRALTLTAGLALTVTPGTAPAQNLFAPAITVDEMVITGYEIEQRRRMMTLLNAPGNVN 64 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +++ ++LI + L+ + +GI + + A LS E F + L++ G+ + Sbjct: 65 ELSREQLIDDRLRLKAARAAGIEPSEQDILDGMDEFAGRADLSREQFVAVLNQGGVDEET 124 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 F+ ++ + W D+V+ F + E+ + L+ ++ Sbjct: 125 FRDFVRAGTAWRDLVRAQFASRTQVTPEEVDRALASGGGSSDVRVLLSEII----MPINA 180 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKK 252 + + + ++++ + G+ + ++L PQ ++ +L Sbjct: 181 QNAESVQARAERISQMTSTADFSAQARQYSATATRDNGGRLPWRDLTELPPQIRSLVLGL 240 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 + T+P Q V + D + G Sbjct: 241 APGEVTDPLPIQGAVALFQLRDIEETGYTRP 271 Score = 45.8 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 37/104 (35%), Gaps = 4/104 (3%) Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKG--VEYI 270 C+ L A + + L +++ K + +G + ++ Sbjct: 303 DRCDDLYAVAKGQPEEVL-DRGALPPAEIPTDIAYELSKLDPGEVSTALTRAEGQTLVFL 361 Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +C + E A ++ + ++ + Y+ +LR+NA I Sbjct: 362 MLCGRTAAVAEDADRSQVEIGLRNRRLSEVSDSYLAQLRANARI 405 >gi|258625370|ref|ZP_05720267.1| peptidyl-prolyl cis-trans isomerse D [Vibrio mimicus VM603] gi|258582361|gb|EEW07213.1| peptidyl-prolyl cis-trans isomerse D [Vibrio mimicus VM603] Length = 619 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 32/403 (7%), Positives = 92/403 (22%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y + + + I+ GD + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYL-ISGGNNAAAKVGNAEISRGDFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q G+ + V Sbjct: 60 QNERNRMQAQLGDYFSNLLADPTYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDDQVRQ 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 Q E + + L + G + F +YL + ++ Sbjct: 120 MILEMPQFQSQGKFDQELYQAALRRAGFTPDMFAEYLRKDLVRNQLMTALQGSEFSLPGE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 +F K + +I + R ++ Sbjct: 180 VNLQDQLISQTRDIRTITLSLAEFAKKVTLSDEDIEQYYKANTERFTRPEQVKVSYVELS 239 Query: 185 ---------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK----------- 218 L ++R + Sbjct: 240 ADALKAEISIDDEAAQQYYQEHLDKYSSAEQRKVSHILIEGDDEQKAQAILDELNAGADF 299 Query: 219 ---LEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ + + + G I + Sbjct: 300 TTVAKEKSQDVGSAQDGGSLGWIERDTMDPAFEAAAYALTEKGQISGLVKSDFGYHIIRL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 D + + + + + + +L A Sbjct: 360 DDVKAPVVKPYTEVAQAIKQELVDQQALDSFYAKQSELEKLAF 402 >gi|238919016|ref|YP_002932530.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Edwardsiella ictaluri 93-146] gi|238868584|gb|ACR68295.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 626 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 31/399 (7%), Positives = 104/399 (26%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + + ++I F + + +Y ++G+ I + + + Sbjct: 1 MMDNLRAAANHVVLKVILALIIISFVLTGVGNYLIGGSGDY-AAKVDGQEIGRAQLEQAV 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + EL K + +I + L Q +K + V Sbjct: 60 QNERSRLQQQLGDQFSVLAGNEGYMKELRKQVLSRMIDDVLLDQYAKKLNLAISDAQVKE 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + + + + G+ + + Q + Q + +++ Sbjct: 120 AIRAMPYFQSDNHFDNAKYLDMVARLGLSPDTYAQLVRQQLVTQQLIQGFTATGFTLPAE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + M + E+ Q+ ++ + ++ + Sbjct: 180 VNALAALTMQQRQVSLATIDISKLMPLQQVSDAELQGYYQQHQSSFIAPETVKVRYIEMD 239 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA------------------------- 223 + ++ V A + + ++ Sbjct: 240 AAAINDKMTVSNAEISAYYDQHKGSFTQPARSDYSVIQVKTEAEAKAIAGQLASGADFAT 299 Query: 224 -------SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 I + G+ +L + + + + + + P + G + + + Sbjct: 300 LAKEKSTDIISRKNGGELGWLEQETTPDEIRAAKLSHKGDVSAPIASSVGYLIVRLNGIQ 359 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++A ++ + K +K+ A Sbjct: 360 PAVVKPLSEVRAEIADKVKQQKALDAFYALQQKVSDAAT 398 >gi|312173557|emb|CBX81811.1| survival protein SurA precursor [Erwinia amylovora ATCC BAA-2158] Length = 431 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 30/309 (9%), Positives = 106/309 (34%), Gaps = 16/309 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGEL 72 +++ + ++ + + ++ +N V+ + D+ + +K Q + L Sbjct: 7 LILGAALTASTAFAAPQVVDKVAAVVNNGVVLESDLDSMMQSVKGQAQQAGQQLPDDRTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ L+++ + Q+ +++G+ ++ A+ +S + S L G+ Sbjct: 67 RHQILERLVMDNILLQKAKQAGLQVSDAQLDQAIANIAQQNKMSIDQLRSRLAYDGMNYA 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +++ + + +V ++ + L E+ + ++ + + +P + Sbjct: 127 SYREQIRKEMATSEVRNSEVRRRVTILPQEVDSLASQLASQNSAGTELNISHILLPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 Q V + A++ ++ + G + +L F Sbjct: 187 PTQQQVDDQENLAKQLVSEAKGGADFGKLAIAHSADPQALKGGNMGWGRIQELPSLFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + + P + G + + D R + ++ + +P + + Sbjct: 247 LVTAKKGDIIGPVRSGVGFHILKVNDMRGDNQSISVTEVHARHILLKPSPIMTDDQARQK 306 Query: 305 VKKLRSNAI 313 ++++ S Sbjct: 307 LQQVASEIK 315 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 56/168 (33%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + ++I+V E R +L +Q QK + A E + Sbjct: 259 VRSGVGFHILKVNDMRGDNQSISVTEVHARHILLKPSPIMTDDQA-RQKLQQVASEIKSG 317 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEY 269 ++ + G + P F++ L + + +P + G Sbjct: 318 KLTFSAAAKQLSQDPGSANQGGDLGWSSAEVFDPAFRDALLRLKKGQIGDPVHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R+ A + Sbjct: 378 IELMDTRKVDKTDAAKKERAYRLLFNRKFAEEAQTWMQEERAAAYVKI 425 >gi|157146942|ref|YP_001454261.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Citrobacter koseri ATCC BAA-895] gi|157084147|gb|ABV13825.1| hypothetical protein CKO_02719 [Citrobacter koseri ATCC BAA-895] Length = 623 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 35/396 (8%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S+ +N + I+ Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYL-IGGSNNYAAKVNDQEISRSQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + ++ V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYAHELKLSISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 A +++ +++ G+ + + Q L Q ++ Sbjct: 120 AIFSTAAFQVDGKFDNNRYNAIVNQMGMTADQYAQALRNQLTTQQLIAGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + + E+ + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQQATDQEVSSYYEQNKNRFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + + Sbjct: 240 AAAMQETVNDADIQSYYDQHQDQFTQPQRNRYSVIQTKTEDEAKAVLDALNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + +N K + + + G + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATTPDELKNAGLKEKGQLSGVIKSSVGFLVARLDDVQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + ++A+ K +K+ A Sbjct: 360 KVKPLSEARDDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|291286199|ref|YP_003503015.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Denitrovibrio acetiphilus DSM 12809] gi|290883359|gb|ADD67059.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Denitrovibrio acetiphilus DSM 12809] Length = 318 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 96/315 (30%), Gaps = 17/315 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWA------MSSRIR---TTINGEVITDGDISKRIALL 63 +K + I+ C+ + + A I TINGE IT + I+ Sbjct: 1 MKKTKILIITIVLCLSLVSCFPGKAGKKNGLTEEEIANTFVTINGERITKDEYEAFISYS 60 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 AV E + + + + + V+ + + + + Sbjct: 61 NSVMDTETRTNPAVVEALHKDFIEHRLLLQKAVAEGVVVDEGKFKDIVESFQTIKGQKML 120 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + + + + + ++ F+ K + +++I + K + L V Sbjct: 121 SEFEKQLNM--NFDSLKELLKQRIIIGKFLEKIADSDIDISEEELKAFYEEKKNELNADV 178 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 I +K ++A + EKF+ + G ++ ++ Sbjct: 179 SAHIQHIVTYE----EKAAQNALGLIKQGIPFSEVAEKFSVAPEKEAGGDLGFINVNEYP 234 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHE 301 F+ L + + G + + K+ LK L A+ K E Sbjct: 235 DIFKEALALKTGQVSGIMKSDYGYHIFKLLEVQKKSGISFDTLKKKLYAELYGIKQENKV 294 Query: 302 AEYVKKLRSNAIIHY 316 EY+ L + I Y Sbjct: 295 REYIDDLYQKSEIIY 309 >gi|206578972|ref|YP_002240079.1| peptidylprolyl isomerase [Klebsiella pneumoniae 342] gi|206568030|gb|ACI09806.1| peptidylprolyl isomerase [Klebsiella pneumoniae 342] Length = 624 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 42/396 (10%), Positives = 109/396 (27%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y + +NG+ I G + Sbjct: 1 MMDNLRTAANSVVLKIIFGIIIVSFILTGVSGYLIGGGKNY-AAKVNGQEIGRGQFENAV 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 A + + + + + LI E+L Q + G++ V Sbjct: 60 ASERNRMQQQLGDQFSELAANENYMKTMRQQVLNRLIDESLLDQYARELGLSISDEQVKQ 119 Query: 105 FFVQHAR---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 Q N + FS + + G+ + + Q L Q ++ Sbjct: 120 AIFQTQAFQTNGKFDNQRFSGIVAQMGMTTDQYAQALRNQLTTQQLINAIAGTDFMLPGE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K + EI A Q+ + + R + Sbjct: 180 SDQLAALVSQQRVVREATINVNTLAAKQTASDEEINAFWQQNQARFMAPEQFRVSYIKMD 239 Query: 189 DNKLQNQGFVQKRIKDAEESRLRL-----------------------------PKDCNKL 219 +Q ++ ++ + + Sbjct: 240 AASMQESASDEEIQSWYDQHKDQFTQPQRNRYSVIQTKTEADAKAVLAELQKGADFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G ++ E+ P+ ++ K + + + G + D + Sbjct: 300 KEKSTDIISARNGGDMGWMEEASTVPELKDAGLKEKGQLSGVIKSSVGFLVARLDDVQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 QVKPLADVRNDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|85705703|ref|ZP_01036800.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseovarius sp. 217] gi|85669693|gb|EAQ24557.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseovarius sp. 217] Length = 304 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 76/307 (24%), Gaps = 52/307 (16%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGD---ISKRIALLKLQK 67 ++ L + +L+ + + S + T+ G IT G + + Q Sbjct: 22 MLRTLFSTTILVTGLALTSPATAQDTPSPETVMATVGGTDITLGHMLAVRAALPEQFDQT 81 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 L +++LI + L Q + + Sbjct: 82 PPDALFSGVLEQLIQQELLVQAHD---------------------------------GEV 108 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + + DV + ++ + Q EY +L Sbjct: 109 SRAAALRLENERRAVLAADVAEGVVNADMTEERLQAAYDAQYAGQEDQTEYKAAHIL--- 165 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQF 246 ++ + ++ ++ S G + + + F Sbjct: 166 --------VETEEEAQKLVAELEGGANFAALAQEHSTGPSGPSGGDLGWFGDGVMVPEFF 217 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 + + + P TQ G I + + R E + T ++ Sbjct: 218 AAVAALEVGDVSAPLQTQFGWHVIQLNETRVK--ERPTLDAVREDLANTLRRDAFNAFMT 275 Query: 307 KLRSNAI 313 + R A Sbjct: 276 E-REAAT 281 >gi|288936830|ref|YP_003440889.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Klebsiella variicola At-22] gi|288891539|gb|ADC59857.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Klebsiella variicola At-22] Length = 624 Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 42/396 (10%), Positives = 109/396 (27%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y + +NG+ I G + Sbjct: 1 MMDNLRTAANSVVLKIIFGIIIVSFILTGVSGYLIGGGKNY-AAKVNGQEIGRGQFENAV 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 A + + + + + LI E+L Q + G++ V Sbjct: 60 ASERNRMQQQLGDQFSELAANENYMKTMRQQVLNRLIDESLLDQYARELGLSISDEQVKQ 119 Query: 105 FFVQHAR---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 Q N + FS + + G+ + + Q L Q ++ Sbjct: 120 AIFQTQAFQTNGKFDNQRFSGIVAQMGMTTDQYAQALRNQLTTQQLINAIAGTDFMLPGE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K + EI A Q+ + + R + Sbjct: 180 SDQLAALVSQQRVVREATINVNALAAKQTASDEEINAFWQQNQARFMAPEQFRVSYIKMD 239 Query: 189 DNKLQNQGFVQKRIKDAEESRLRL-----------------------------PKDCNKL 219 +Q ++ ++ + + Sbjct: 240 AASMQESASDEEIQSWYDQHKDQFTQPQRNRYSVIQTKTEADAKAVLAELQKGADFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G ++ E+ P+ ++ K + + + G + D + Sbjct: 300 KEKSTDIISARNGGDMGWMEEASTVPELKDAGLKEKGQLSGVIKSSVGFLVARLDDVQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 QVKPLADVRNDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|262042477|ref|ZP_06015636.1| peptidylprolyl cis-trans isomerase D [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040181|gb|EEW41293.1| peptidylprolyl cis-trans isomerase D [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 638 Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 41/395 (10%), Positives = 109/395 (27%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y + +NG+ I G + Sbjct: 16 MMDNLRTAANSVVLKIIFGIIIVSFILTGVSGYLIGGGKNY-AAKVNGQEIGRGQFENAV 74 Query: 61 ALLKLQKIN---------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 A + + + + + LI E+L Q + G++ V Sbjct: 75 ASERNRMQQLGDQFSELAANENYMKTMRQQVLNRLIDESLLDQYARELGLSISDEQVKQA 134 Query: 106 FVQHAR---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND----------- 151 Q N + FS + + G+ + + Q L Q ++ Sbjct: 135 IFQTQAFQTNGKFDNQRFSGIVAQMGMTTDQYAQALRNQLTTQQLINAIAGTDFMLPGES 194 Query: 152 ----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 K + EI A Q+ + + R + Sbjct: 195 DQLAALVSQQRVVREATINVNALAAKQTASDEEINAFWQQNQARFMAPEQFRVSYIKMDA 254 Query: 190 NKLQNQGFVQKRIKDAEESRLRL-----------------------------PKDCNKLE 220 +Q ++ ++ + + + Sbjct: 255 ASMQESASDEEIQSWYDQHKDQFTQPQRNRYSVIQTKTEADAKAVLAELQKGADFATLAK 314 Query: 221 KFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + ++ I + G ++ ++ P+ ++ K + + + G + D + Sbjct: 315 EKSTDIISARNGGDMGWMEDASTVPELKDAGLKEKGQLSGVIKSSVGFLVARLDDVQPAQ 374 Query: 280 GE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 375 VKPLADVRNDIAAKVKQEKALDAYYALQQKVSDAA 409 >gi|317492905|ref|ZP_07951329.1| ppic-type ppiase domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919027|gb|EFV40362.1| ppic-type ppiase domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 627 Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 43/399 (10%), Positives = 104/399 (26%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + + +++ F + + Y + ++G+ I+ G + + + Sbjct: 1 MMDNLRAAANHVVLKIILGLIIVSFVLTGVGGYLTGGSGDY-AAKVDGQEISRGQLEQAV 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + EL K A+ LI + L Q +K G+ V Sbjct: 60 QSERSRLQQQLGDQFSVLAGNEGYMKELRKQALNRLIDDMLLDQYAKKLGLGISDEQVKE 119 Query: 105 FFV---QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 N + S + G+ +++ Q + Q +++ Sbjct: 120 AIWAMPYFQTNNQFDNAKYLSIIANMGLTPDNYAQLVRQQLTSQQLIQAYTATGFTLPVE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVRE----------- 177 + E+ A ++ KN + Sbjct: 180 VEAMAALTMQQRDVRLATIDIKALEKDQKVTDEELKAYYEQNKNSFIAPEEVKVSYIEMD 239 Query: 178 -----------------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 Y + + K DA+ L + + Sbjct: 240 AAAIQDKVTVSDDEIAAYYDQHKSSYTQPERKDYSVIQVKTEADAKAVLDELNSGADFAK 299 Query: 221 KFASKI----HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 A K G+ +L + ++ + + G + + D + Sbjct: 300 VAAEKSTDIISRKKGGELGWLEPGTTPDEILGAKLTTKGQLSGAVKSSVGYLVVRLNDIK 359 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++A + AQ K +K+ +A Sbjct: 360 PEQVKPLAEVRADIEAQVKQQKALDAFFALQQKVSDSAT 398 >gi|256556956|gb|ACU83578.1| parvulin-like peptidyl-prolyl isomerase [uncultured bacterium HF130_AEPn_2] Length = 623 Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 48/402 (11%), Positives = 117/402 (29%), Gaps = 89/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++++ I + +S+ +NGE I+ ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIVVLMAFTGIEAIFQATTNSQDAAKVNGEEISQNELSQAV 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q + L + A++ LI L Q S +F ++ Sbjct: 61 DMQRRQLMQQLGKDFDASLLDEKMLREAALKGLIERKLLLQGAADSKFSFSEAALDQVIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML---------- 154 + + SAE F + + G F+Q L + + + Sbjct: 121 QTPEFQEDGKFSAERFDQVIRQLGYSRMQFRQMLTQEMLIGQLRAGIAGSGFVTDQEVLN 180 Query: 155 ---------------------KYGNLEMEIPANKQKMKNITVREYLIRT----------- 182 + E+ A + + + Sbjct: 181 FARLEKQTRDFATVSVKADPAAVKLTDDEVKAYYDQHAKEFMTPDQVVIDYLELKKASFF 240 Query: 183 --------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL--------------- 219 L ++ + + N ++ E ++ + K Sbjct: 241 DQVTVNDDELQALYEKETANLAEQRRAAHILIEVNDKVTEAQAKAKIDEVQARLAKGESF 300 Query: 220 ----EKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 ++F+ + G + P+F++ +Q+ + P + G I + Sbjct: 301 EALAKEFSQDPGSANNGGDLGFAGPGVYDPEFESALYGLNQDQVSAPVRSSFGWHLIKLL 360 Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++ +LK L+ + ++E+ E K+L A Sbjct: 361 GVEAPEVPSFASLKDKLTRELKTQQVEQRFVEATKQLEDAAF 402 >gi|238755738|ref|ZP_04617071.1| Chaperone surA [Yersinia ruckeri ATCC 29473] gi|238706030|gb|EEP98414.1| Chaperone surA [Yersinia ruckeri ATCC 29473] Length = 433 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 104/302 (34%), Gaps = 16/302 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ + ++ + ++ +N V+ D+ + +KL L Sbjct: 7 LILGLVVCANTAFAAPQEVDKVAAVVNNGVVLQSDVDGLLQSVKLNAQQAGQQIPDEATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ ++ Q +K GIT ++ A ++ + S L +G+ + Sbjct: 67 RHQILERLIMDNIQLQMAQKMGITVSDEALDKAIADIAAQNRMTTDQMRSRLAAEGLNYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L E+ + +++ T + + IP + Sbjct: 127 TYRAQIRKEMLTSEVRNNEVRRRVNILPQEVESLAKQISAQTGDDAELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 +Q V A+ + ++ + G+ + +L F + Sbjct: 187 PSQQQVDTAEDLAKNLVAELKKGADFGKLAIANSADSQALKGGQMGWGKLQELPTLFAER 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 L S+ + P + G + + D R + ++ + + + Sbjct: 247 LKTTSKGDIVGPIRSGVGFHILKVNDIRGENKSISVTEVHARHILLKPSVVMTDDQARAK 306 Query: 305 VK 306 ++ Sbjct: 307 LQ 308 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 22/167 (13%), Positives = 54/167 (32%), Gaps = 2/167 (1%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + + K+I+V E R +L +Q + + + + Sbjct: 259 IRSGVGFHILKVNDIRGENKSISVTEVHARHILLKPSVVMTDDQARAKLQAAANDIKNGK 318 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYI 270 + + G + P F++ L K + + P + G I Sbjct: 319 VTFADEAKRLSEDSGSAIQGGDLGWASPDIYDPAFRDALLKLKKGEISAPVHSSFGWHLI 378 Query: 271 AICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R + + A K K + ++++ R+ + + Sbjct: 379 QLLDTRQVDRTDAAQKDRAYRMLFNRKFAEEAQTWMQEQRAASYVKI 425 >gi|262394811|ref|YP_003286665.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio sp. Ex25] gi|262338405|gb|ACY52200.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio sp. Ex25] Length = 619 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 40/406 (9%), Positives = 102/406 (25%), Gaps = 92/406 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY ++ + I G+ Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYIVSGNNNS-AAKVGNTEIPRGEFEMAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + +I + L Q+ E G+ V Sbjct: 60 QNERNRMQAQLGDYFSQMLADPAYVESFRKSVLDRMINDVLLDQQAEALGLRISDTQVRS 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 Q N E + + L + G + F +Y+ + + ++ Sbjct: 120 MILDMPQFQSNGQFDQEIYQASLRRAGFSPDSFAEYMRRELVREQLLNALQNSEFILPGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +F + EI + + R ++ + Sbjct: 180 VQAEGKLFTQTRDIRTIKIDLAEFAKNIELTDEEIQQYYKANPDNFTRPEQVKVAYIELS 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 L+ Q V + + + + Sbjct: 240 AEALKEQVNVSDAEVKKYYDEHLNKYSSEEQRRVAHILVEGDDEAKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ K+ +T+ + G I + Sbjct: 300 ATLAQEKSDDFGSAENGGDLGWIERDVMDPAFEEAAFALKNPGDTSGLVKSDFGYHIIKL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +D + A + + + E +L A Y Sbjct: 360 EELKDSVAKPFEEVAAEIKQEMVDQQAVDQFYELQSELERVAF-EY 404 >gi|254718001|ref|ZP_05179812.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. 83/13] gi|265982948|ref|ZP_06095683.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella sp. 83/13] gi|306839780|ref|ZP_07472581.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. NF 2653] gi|264661540|gb|EEZ31801.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella sp. 83/13] gi|306405135|gb|EFM61413.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. NF 2653] Length = 331 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 85/282 (30%), Gaps = 48/282 (17%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETLKKQEIEKSGIT 96 S++ TING+ IT G++ + L Q + A+ LI E EK + Sbjct: 61 SKVLATINGKDITVGEVDQTAGDLDPQFARLPVEQRRLAALAALIDIKAMAGEAEKDKL- 119 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 Q ++L +++ + KN + K Sbjct: 120 -----------------------------DQTKEFKDRMEFLRERALHNEYFKNAIVDKI 150 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + ++ +K+ E R +L + + K Sbjct: 151 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEEAEA-----------IIKKLEGGAKFE 199 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICD 274 + + ++ S G Y E + P+F+ T P TQ G I + D Sbjct: 200 DLAKASSTDGTASSGGDLGYFTEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLED 259 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R + Q + + E VKKLR I Y Sbjct: 260 RRTKQP--PAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 299 >gi|313675959|ref|YP_004053955.1| ppic-type peptidyl-prolyl cis-trans isomerase [Marivirga tractuosa DSM 4126] gi|312942657|gb|ADR21847.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marivirga tractuosa DSM 4126] Length = 449 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 99/308 (32%), Gaps = 16/308 (5%) Query: 16 LTTYFVLIIFCIVPIV--SYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKINGE 71 + T+F + F PI + +I ++ +I + D++ L + + + E Sbjct: 8 ILTFFTSLAFLFAPIWVEAQSEVKTVDKIIAKVDNYIILESDLALAYKDRLSRGGQQSAE 67 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 ++ LIV L + E +T + V+ + + G Sbjct: 68 GRCEVLESLIVNKLMLAKAEIDSVTVLESQVDAQLENRMKMMVQQIGSEEKIEEYYGKSL 127 Query: 132 NHFKQYLAIQSIWPDVV---KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV---LF 185 + FK + ++ + ++ + ++ Y + + Sbjct: 128 DEFKVEIRDDVKEQMIIGEMQRTITQDLEVTPKQVQNFFDNIPKDSLPFYSTQVQVGQIV 187 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHP 244 P + + ++ R+ E L + ++ + S G Y L P Sbjct: 188 KKPTMSREAKENIKARLNGLRERILEGENFEDIARLYSQEPGAKQSGGNIGYFERGQLAP 247 Query: 245 QFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE-KHEA 302 +++ + + P T G I + D+R G ++ TK + + Sbjct: 248 EYEATALRLKPGEISKPVETDFGFHIIELLDRR---GNEFNTRHILILPKFTKRDMEKSV 304 Query: 303 EYVKKLRS 310 +++ +R+ Sbjct: 305 QFLDSIRN 312 >gi|182680158|ref|YP_001834304.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Beijerinckia indica subsp. indica ATCC 9039] gi|182636041|gb|ACB96815.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Beijerinckia indica subsp. indica ATCC 9039] Length = 299 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 83/283 (29%), Gaps = 49/283 (17%) Query: 38 MSSRIRTTINGEVITDGDI----SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 ++++ +NG+ ITD D+ + L Q + + LI L Q+ + Sbjct: 36 AAAKVLAKVNGKEITDEDLKYATEDLASSLPPQLEGKARDSYLLDYLIDAELVAQKAQAE 95 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + ++ N Y + + ++ Sbjct: 96 KLDKTTDFNNRL------------------------------AYFREKLLMEVLLSQVAK 125 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 ++ ++ +E R +L + D+ ++ Sbjct: 126 GAVTEEALKTAYDEAAKAQKPEQEIHARHILVATDDDAKAVLKRLKA-----------GE 174 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 ++ + G + + + P+F + K +N + P +Q G I + Sbjct: 175 DFAKVAKEVSKDPSA-DGGDLGWFTKDRMVPEFADAAFKLDENQLSEPVKSQFGWHIIQV 233 Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 KR + Q I++ + E V +LR A I Sbjct: 234 LGKRQKT--FPPYDQVREQVARFVIQRAQGELVAQLRKAAKIE 274 >gi|260467140|ref|ZP_05813318.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mesorhizobium opportunistum WSM2075] gi|259029064|gb|EEW30362.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mesorhizobium opportunistum WSM2075] Length = 309 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 80/283 (28%), Gaps = 49/283 (17%) Query: 40 SRIRTTINGEVITDGDI---SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 + + T+NG+ +T+ D+ ++ Q + A+ I + + +G+ Sbjct: 54 NAVVATVNGQPLTEADLMLAEGELSQQFAQLPPEQRRAAALSAAIEIRVMAAQAVTTGLD 113 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 D + +L +++ ++V+ + K Sbjct: 114 KDPDFQRR------------------------------MAFLQQRALHGEMVEKGVVAKV 143 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + E+ +++ V E R +L + + Sbjct: 144 TDAEVRARYDQEIANTPPVNEVHARHILVKTKEEAEA-----------IIKQLDGGADFQ 192 Query: 217 NKLEKFASKIHDV-SIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAIC 273 + S S G + + P+F + T P +Q G I + Sbjct: 193 KLANEHTSDPSGKTSGGDLGWFGPGQMVPEFDKAAFALEVGKYTEQPVQSQFGWHVIKLE 252 Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 DKR + Q I VK LR+ A + Sbjct: 253 DKRTKQP--PAFDDVKDQAKQAVIRDKYFALVKSLRAGAKVEI 293 >gi|114048051|ref|YP_738601.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-7] gi|113889493|gb|ABI43544.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-7] Length = 621 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 40/407 (9%), Positives = 92/407 (22%), Gaps = 95/407 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ I V++ F + SY + S +NG+ IT ++ + Sbjct: 1 MLEKIRDGSQGVIAKGILVLVILSFAFAGVSSYLG-SQSDVPAAEVNGDKITKAELEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +++ ++ L+ + L Q G+ + Sbjct: 60 QSERARMEQQLGEMFAALSADERYLESIKQSVLERLVADKLIDQAAAAMGLRVSDEQIIA 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + + + + L + G F+ + + + Sbjct: 120 AIKSEPAFQTDGKFDNDRYQAILRQLGYQPQTFRSMMRVDMTRRQLTAALVGTEFVLPGE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 F+ + ++ + + + Sbjct: 180 AKQLAELQGQTRDIRYLVVDSAPFLANASVTDEQVKNYYDTNQGQFMSPEKVSLEYVELN 239 Query: 185 ---------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK-------- 221 + D +KR+ + K + Sbjct: 240 SADFAKDSKVTDEEAQAYYDEHKTQYVSNEKRLAAHILIGPGSDEAVAKAKAEDLAKQLD 299 Query: 222 ------------FASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVE 268 + GK + + P F L + + T G Sbjct: 300 NGADFAELAKANSEDTLSAEQGGKLDWFEPGVMDPSFDTALFALQKGQHSAVVKTDFGFH 359 Query: 269 YIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 I + D + +KA + AQ K KL + Sbjct: 360 IIKLLDVQPGTTVPFADVKAKIVAQLQEKKAVDQFYSLQSKLADTSY 406 Score = 40.4 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 39/131 (29%), Gaps = 4/131 (3%) Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + K+ + E +R + + +++ A+ + + K + Sbjct: 487 EVKADISDRLKQDQANEAARAKAQELMTQVKAGAADVTLTAKAKLGRGAQDVDAAIVGKA 546 Query: 250 LKKSQNNTTNPYVT---QKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYV 305 + + T T G IA+ L L + E + Sbjct: 547 FQMPTPSATPVVDTVGLANGYAVIALDKVNAAESVSDELVNALKQRLNAQYSEADYRGLI 606 Query: 306 KKLRSNAIIHY 316 + L++NA I Y Sbjct: 607 ESLKANAKIDY 617 >gi|171910875|ref|ZP_02926345.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verrucomicrobium spinosum DSM 4136] Length = 344 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 82/304 (26%), Gaps = 20/304 (6%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ------------KINGELEKIAVQE 79 S S+ I +NG+V+T ++ + + + +L + A+ Sbjct: 20 SSAVAQSSNGIAVVVNGKVVTKSEVKEAVEAQEQLIRMTVRDPNEQTARLAQLREGALYA 79 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 LI L E +K G + ++ R+ + + + Sbjct: 80 LIERQLVLSEFDKLGGSIKPQYIDDDINGIVRDNFEGNREKFLMELAKTGMTLKKFREQR 139 Query: 140 IQSIWPDVVKNDFMLK-YGNLEMEIPANKQKMKNITVREYLIRT----VLFSIPDNKLQN 194 + + V++ ++ +K + + I+ + N + Sbjct: 140 QKMMVVSVLRARQTKDLAPPTPAQVEEFYRKNADKFRDKDYIKFSTITIPKYPIGNVGAS 199 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKS 253 +K ++ N + ++ S G + L + + Sbjct: 200 PESQKKLAEEIRGKVTNGSDFANLAKTYSQDSRAESGGDWGLQERATLSREIAEVAFALK 259 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + I K+ E ++ + + ++ L S Sbjct: 260 VGGVSRVVEIGGNYMIIYCEAKQPGNMEPLEKVRPQIEKFIQSEQGRNAVNRWLSGLASK 319 Query: 312 AIIH 315 AII Sbjct: 320 AIIQ 323 >gi|254464586|ref|ZP_05077997.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacterales bacterium Y4I] gi|206685494|gb|EDZ45976.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacterales bacterium Y4I] Length = 305 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 92/248 (37%), Gaps = 6/248 (2%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 T+N +VIT ++ +R ++ G+ + A +ELI + LK ++++GI + Sbjct: 42 AITVNDQVITRYELEQRARFQAALRVPGDPLETAREELINDRLKLMVLKQAGIELSEEDI 101 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + A LS +F + L +QG+ + + + W + + F+ + E Sbjct: 102 TAGMEELAGRANLSLNEFLTVLQQQGVAPQTLRDFTKVGLGWREYTRARFLSRARPTPEE 161 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I +V+ L ++ N Q + V++ ++ Sbjct: 162 IDRAMGTSGTGSVQVLLSEFIVPLNDQNAAQVEELVEQ-----VAKLKGYDSFSAAATQY 216 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 ++ G+ ++ + L PQ Q ++ + P Q V + R++ G Sbjct: 217 SAAGSRGDGGRLPWMPLTKLPPQLQEVVLALQPGEISEPLPLQGAVALFQMRGLREVEGA 276 Query: 282 IALKAYLS 289 + + Sbjct: 277 APRFSAIE 284 >gi|82775652|ref|YP_401999.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Shigella dysenteriae Sd197] gi|81239800|gb|ABB60510.1| putative protease maturation protein [Shigella dysenteriae Sd197] Length = 623 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDNLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVRHEKALDAYYALQQKVSDAA 395 >gi|163739707|ref|ZP_02147115.1| leucyl aminopeptidase [Phaeobacter gallaeciensis BS107] gi|161386937|gb|EDQ11298.1| putative chaperone surA [Phaeobacter gallaeciensis BS107] Length = 421 Score = 99.7 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 97/259 (37%), Gaps = 6/259 (2%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLK 86 ++ + + T+N V+T+ ++ +R L L + G+ +K A ++LI++ LK Sbjct: 32 VMFGPAPAAAQGLFAPAVTVNDAVVTNYELQQRARFLTLLRDPGDPQKKAREDLILDRLK 91 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 + ++GI + + A LS ++F + L + G+ + + + W + Sbjct: 92 LDVLAQAGIEPTEEEIVEGMTELAGRANLSLQEFLNVLGQNGVAPETLRDFTRVGIAWRE 151 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V ++ + E EI + V L ++ N Q + Q+ Sbjct: 152 YVAARYLAQARPSEEEIDRAMGLAGSGGVEVLLSELIMPINAQNAAQVEEIAQQ-----V 206 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQK 265 +++++ S G+ ++ ++L PQ Q ++ T P Sbjct: 207 SRITTTGAFSQAAQQYSATATRQSGGRLPWMPLTNLPPQLQQVVLGLRPGEVTAPLPLDG 266 Query: 266 GVEYIAICDKRDLGGEIAL 284 V + D R+ G Sbjct: 267 AVALFQLRDLRETSGAAPS 285 >gi|220905632|ref|YP_002480944.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869931|gb|ACL50266.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 639 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 42/403 (10%), Positives = 99/403 (24%), Gaps = 96/403 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + L ++++F + ++ + + +NG+ I+ + Sbjct: 1 MLEYIRDKSQSLGVKLAFGLIILVFVFWGVGNFNDRSSG-TLVAVVNGDPISMREFELAY 59 Query: 61 A------------LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 L + Q +L + +++LI + L QE ++G++ + Sbjct: 60 RNAEENLLRSNPGLTREQLKQQQLGRQILRDLITQVLLSQEAARTGVSITPLELRMAVGN 119 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN------------------ 150 + + + + Sbjct: 120 IKGFQNEKGQFDPEVYTRVLAAQRMAPAQFEQDMSRDLLRQKIFAMVTAPAWVDPAESQK 179 Query: 151 -------------------DFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPD 189 DF + E+ A + K + VL S D Sbjct: 180 RFEFLREKRDVDYIFIPASDFAASVKPSDEEVQAYYESHKAQFAIPARADVAYVLVSPQD 239 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCN-------------------------------- 217 + K ++ R + Sbjct: 240 LVKASGISSAAAEKWYADNAARFEQQEEVKAAHILVPLAEDASEADVKKAQEQAAAIEAE 299 Query: 218 --KLEKFASKIHDVSI-------GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 + FA+ + G+ +L F++ + + P +Q G+ Sbjct: 300 LKAGKSFAAVADAHNGPNAAGPGGELGWLKRGTTVKPFEDAAFALAPGKVSAPVRSQFGL 359 Query: 268 EYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 I + +K+D L ++A + A + + V L Sbjct: 360 HIIKVEEKKDGGLPPFKQVEAEVLAAMAQEQGADKLHDVVDNL 402 >gi|325106143|ref|YP_004275797.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pedobacter saltans DSM 12145] gi|324974991|gb|ADY53975.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pedobacter saltans DSM 12145] Length = 454 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 29/271 (10%), Positives = 85/271 (31%), Gaps = 10/271 (3%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAV 77 +++I I+ + + ++ + +I ++ ++ A LQ K + ++ + Sbjct: 4 YLVIALLIMSSNLFAQKKVIDKVVAVVGDNIILQSEVEQQYAQYILQGTKPDPNIKCYIM 63 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 Q ++ + L ++ I + V+ + R A + G +K Sbjct: 64 QSMLSQKLLTKQAAIDSIVVEDGDVDNEVERRMRTMITRAGGEQRLEEFLGRPVILYKDE 123 Query: 138 LAIQSIWP---DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + ++ K +++ Q + ++ Y + I Sbjct: 124 IRPDIREQLVAQKMQAKITEKVEVTPLDVRRFYQAIPKDSLPVYNTEVEVGEIVIYPKLT 183 Query: 195 QGFVQKRIKDAEESRLRLPK---DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN-L 249 + + E RLR+ ++ G+ + + + +F Sbjct: 184 KEEKETYKDKLEALRLRIKNGDSFATLARLYSQDPGSARDGGELPFFDRNTMAKEFTAWA 243 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 K + + T+ G ++ + ++R Sbjct: 244 FKLKPGELSPVFETEFGFHFLEVLERRGENV 274 Score = 40.8 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 26/285 (9%), Positives = 70/285 (24%), Gaps = 18/285 (6%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 +T D+ + + + ++ V E+++ +E +++ Sbjct: 146 EVTPLDVRRFYQAIPKDSLPVYNTEVEVGEIVIYPKLTKEEKETYKDKLEALRLRIKNGD 205 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + T + G F + + K E E + + Sbjct: 206 SFATLARLYSQDPGSARDGGELPFFDRNTMAKEFTAWAFKLKPGELSPVFETEFGFHFLE 265 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHD 228 + R +L + + ++ + ++ + Sbjct: 266 VLERRGENVRARHILIVPDSPPAALERARVEIDSIYQKVVAKKMDFSAAASLYSGNNDTK 325 Query: 229 VSIGKA---------QYLLESDL-HPQFQNLLKKSQNNTTNP-YVTQK----GVEYIAIC 273 + G Y+ L F + + + P T G ++ + Sbjct: 326 YNGGMILNYESSNRTTYIPTDKLDPSIFLVVDTMKVGSYSKPDVFTDNRGKKGYRFLYLK 385 Query: 274 DKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + K K +++ +K R + I Sbjct: 386 TKIPPHTANLEQDFPKIKEAAYEEKTSKVVSDWFEKRRKSTYIRI 430 >gi|189499014|ref|YP_001958484.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium phaeobacteroides BS1] gi|189494455|gb|ACE03003.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium phaeobacteroides BS1] Length = 440 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 29/313 (9%), Positives = 90/313 (28%), Gaps = 15/313 (4%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ---- 66 ++ + A++ RI + E+I + ++ + +LQ Sbjct: 2 IMKNRFLRLVAVVFIMVAAGFQRAGAAVADRIVAVVGNEMIMQSQVDEQAMMARLQYTEA 61 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 K + L+ ++ L+ + + I D + + + R Sbjct: 62 KNDPSLKAGILENLVTRKIVLTKARIDSIQVDESDIEKRTDERMRFLRSKFSSIEEMEST 121 Query: 127 QGIGDNHFKQYLAIQSIWPDVV-----KNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 ++ + ++ + + E+E + K V E + Sbjct: 122 FSKSYAVIEKEIKDDIRDQQLINNLRRQKMMGVNVTYEEVEDFYGANRDKLPVVPEAVEV 181 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 + + P + + + I+ ++ +++ G Y Sbjct: 182 SQVVMYPKVTAEAKAKARAAIEAMQQRLRSGENFAALAREYSQDPGSARLGGDLGYSRRG 241 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 + ++ + + + T+ G I + DK + ++ + ++ Sbjct: 242 EFVKNYEKVAFGLEEGEISGIVETRFGYHIIQLLDKEQ---DAVHTRHILIVFDRSTLDA 298 Query: 300 -HEAEYVKKLRSN 311 ++ +RS+ Sbjct: 299 PAAKAALEMIRSD 311 Score = 39.7 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 13/169 (7%), Positives = 36/169 (21%), Gaps = 17/169 (10%) Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + ++ + R +L + L + +++ Sbjct: 269 YHIIQLLDKEQDAVHTRHILIVFDRSTLDAPAAKAALEMIRSDIISGKSDFAEMAREYSD 328 Query: 225 KI-HDVSIGKA-------QYLLESDLHPQFQN--LLKKSQNNTTNPYVT--QKG---VEY 269 G S L Q + K + ++ + G Sbjct: 329 DPVSSKYGGVIRNTETGETRFAVSSLRDQLKTVVRSFKKVGDISSVVRVAPESGAPFYAI 388 Query: 270 IAICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + L K + E++ +L+ + Sbjct: 389 FKLNSREPAHKLDLSSDYARLEKLAIDEKQNRLFQEWINELQKEVYVRI 437 >gi|126724635|ref|ZP_01740478.1| PPIC-type PPIASE domain protein [Rhodobacterales bacterium HTCC2150] gi|126705799|gb|EBA04889.1| PPIC-type PPIASE domain protein [Rhodobacterales bacterium HTCC2150] Length = 341 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 26/315 (8%), Positives = 79/315 (25%), Gaps = 44/315 (13%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 ++ + ++ ++ I +V + + T+NG+ IT G + Sbjct: 50 LHRLSIKRNISMRFSHSFSAAAIMGMVFVGQPAFSQNMDTVLATVNGDQITLGHMIAMEQ 109 Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 L Q N + + S Sbjct: 110 RLPQQYRN-------------------------------YPDDVLYDGILQQLIQQALLS 138 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 +D + + ++++ ++ + E ++ T Sbjct: 139 QIVDGKDDLVLNLSIENEVRALKAGLLLDQISADAVTEEAVTKIYDERFAGQTGGVEWNA 198 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + + +++ + ++ ++ G+ + Sbjct: 199 SHILVDTEDEAKALIVT----------LAEGADFAELAKEKSTGPSGPRGGQLGWFGPGQ 248 Query: 242 LHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 + P+F+ + + + P TQ G + + D R+ + A+ Sbjct: 249 MVPEFEGAAAEMETGDVSAPVQTQFGWHVLKMNDIRETPA--PTLEEVRAEIVAEIQGLA 306 Query: 301 EAEYVKKLRSNAIIH 315 ++ A + Sbjct: 307 VDSAIEAAEVRATVE 321 >gi|330011537|ref|ZP_08307123.1| peptidyl-prolyl cis-trans isomerase D [Klebsiella sp. MS 92-3] gi|328534154|gb|EGF60789.1| peptidyl-prolyl cis-trans isomerase D [Klebsiella sp. MS 92-3] Length = 639 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 40/396 (10%), Positives = 107/396 (27%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y + +NG+ I G + Sbjct: 16 MMDNLRTAANSVVLKIIFGIIIVSFILTGVSGYLIGGGKNY-AAKVNGQEIGRGQFENAV 74 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 A + + + + + LI E+L Q + G++ V Sbjct: 75 ASERNRMQQQLGDQFSELAANENYMKTMRQQVLNRLIDESLLDQYARELGLSISDEQVKQ 134 Query: 105 FFVQHAR---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 Q N + FS + + G+ + + Q L Q ++ Sbjct: 135 AIFQTQAFQTNGKFDNQRFSGIVAQMGMTTDQYAQALRNQLTTQQLINAIAGTDFMLPGE 194 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K + EI Q+ + + R + Sbjct: 195 SDQLAALVSQQRVVREATINVNALAAKQTASDEEINVFWQQNQARFMAPEQFRVSYIKMD 254 Query: 189 DNKLQNQGFVQKRIKDAEESRLRL-----------------------------PKDCNKL 219 +Q + ++ + + Sbjct: 255 AASMQESASDDEIQSWYDQHKDQFTQPQRSRYSVIQTKTEADAKAVLAELQKGADFATLA 314 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G ++ ++ P+ ++ K + + + G + D + Sbjct: 315 KEKSTDIISARNGGDMGWMEDASTVPELKDAGLKEKGQLSGVIKSSVGFLVARLDDVQPA 374 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 375 QVKPLADVRNDIAAKVKQEKALDAYYALQQKVSDAA 410 >gi|259907387|ref|YP_002647743.1| peptidyl-prolyl cis-trans isomerase SurA [Erwinia pyrifoliae Ep1/96] gi|224963009|emb|CAX54492.1| Peptidyl-prolyl cis-trans isomerase, survival protein [Erwinia pyrifoliae Ep1/96] gi|283477220|emb|CAY73127.1| survival protein SurA precursor [Erwinia pyrifoliae DSM 12163] gi|310765112|gb|ADP10062.1| peptidyl-prolyl cis-trans isomerase SurA [Erwinia sp. Ejp617] Length = 431 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 30/309 (9%), Positives = 106/309 (34%), Gaps = 16/309 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGEL 72 +++ + ++ + + ++ +N V+ + D+ + +K Q + L Sbjct: 7 LILGAALTASTAFAAPQVVDKVAAVVNNGVVLESDLDSMMQSVKGQAQQAGQQLPDDKTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ L+++ + Q+ +++G+ ++ A+ +S + S L G+ Sbjct: 67 RHQILERLVMDNILLQKAKQAGLQISDAQLDQAIANIAQQNKISVDQLRSRLAYDGMNYA 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +++ + + +V N+ + L E+ + ++ + + +P + Sbjct: 127 SYREQIRKEMATAEVRNNEVRRRVTILPQEVDSLATQLASQNSAGTELNISHILLPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 Q V + A++ ++ + G + +L F Sbjct: 187 PTQQQVDDQENLAKQLVSEAKGGADFGKLAIANSADPQALKGGNMGWGRIQELPSLFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + + P + G + + D R + ++ + +P + + Sbjct: 247 LVTAKKGDIIGPVRSGVGFHILKVNDMRGDSQSISVTEVHARHILLKPSPVMTDDQARQK 306 Query: 305 VKKLRSNAI 313 ++++ + Sbjct: 307 LQQVANEIK 315 Score = 78.9 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 57/168 (33%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + ++I+V E R +L +Q QK + A E + Sbjct: 259 VRSGVGFHILKVNDMRGDSQSISVTEVHARHILLKPSPVMTDDQA-RQKLQQVANEIKSG 317 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEY 269 + ++ + G + P F++ L + + +P + G Sbjct: 318 KLTFSDAAKQLSQDPGSANLGGDLGWSSAEVYDPAFRDALLRLKKGQIGDPVHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R+ A + Sbjct: 378 IQLMDTRKVDKTDAAKKERAYRLLFNRKFAEEAQTWMQEERAAAYVKI 425 >gi|241206516|ref|YP_002977612.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860406|gb|ACS58073.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 293 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 84/301 (27%), Gaps = 49/301 (16%) Query: 22 LIIFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISKRIALL---KLQKINGELEKIAV 77 L + V+ ++ A + + + I ++ +A L Q + + + A+ Sbjct: 7 LAVLAFATFVALQAPAYADDAVIAKVGTLEIHQSELDLAVANLDPQLAQLPDDQKKVAAL 66 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 I L A D ++ Q QY Sbjct: 67 SAAIDVKLL------------------------------AADAAAEKLDQTDEFKKRMQY 96 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 L + + K + E++ +K+ E R +L Sbjct: 97 LTDRELHNAYFKKHVVDIVTPDEVKARYDKEVAALPKQEEVHARHIL-----------VK 145 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256 + KD + ++ ++ + G Y + +F++ + Sbjct: 146 TEDEAKDIIKQLDAGKDFAELAKEKSTDPNKSEGGDLGYFSRGRMVKEFEDAAFALEKGT 205 Query: 257 TTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + DKRD + Q + E + K +++A I Sbjct: 206 YSKTPVKTDFGFHVIKVEDKRDAPP--PPFEQVQDQVRQLVMRDKYLELLNKAKASAKIE 263 Query: 316 Y 316 Sbjct: 264 I 264 >gi|289522411|ref|ZP_06439265.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504247|gb|EFD25411.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 388 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 102/331 (30%), Gaps = 21/331 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVS----YKSWAMSSRIRTTINGEVITDGDI 56 + + T + + FV+ IF I S + ++ NG I I Sbjct: 2 ILKALRTRTKVIMIAVAVAFVISIFAGYGIYSRRGDSSATTEKDKVVAKANGTNIMLSQI 61 Query: 57 SKRIALLKLQKINGEL--------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + L Q L K + +++++ +E++++ I + +N + Sbjct: 62 DMGVRQLMDQMGISNLPQSQYYILRKHVLDQIVLDMELDKEVKENKIEVTDDEINVAMDR 121 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + E + +L I + K+ L Q +++ E E+ + Sbjct: 122 IISQF-PTKEAYQDYLSAYNIKEEDLKKELRRQLAQQKLLQTAVKTDDTVTEEEMQEFYE 180 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + V F+I + + ++DA S ++ A Sbjct: 181 ARGDDYFVRPEGLWVNFAIFSD-----EKTAQGVRDALASGQTWDDVMSQYGDKALHSTS 235 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY---VTQKGVEYIAICDKRDLGGEIALK 285 + + + L + + + P Q G+ + K++ +K Sbjct: 236 YDKPLLLPMTTLEAQEELLPLKELKEGELSRPIQLDEEQFGIYLVKGYQKQEKIPYDEVK 295 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + K + EY++ L A + Sbjct: 296 ENIKLALSQQKAQAQRQEYLQGLVDRANVEI 326 >gi|149178604|ref|ZP_01857190.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces maris DSM 8797] gi|148842530|gb|EDL56907.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces maris DSM 8797] Length = 317 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 36/317 (11%), Positives = 87/317 (27%), Gaps = 21/317 (6%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR---------IRTTINGEVITDGDISKRIA 61 FI L + + V + ++ + S + + + + T+NG +T D+ Sbjct: 1 MFISLRSIFIVSSLALLMFAPASDSLSAADKAPAIKDTTKVLVTVNGHPVTQADLDFATL 60 Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 ++ ++ LI + L + + I ++ + + D Sbjct: 61 TRRMAGDQKPNPAQLLESLINQRLIQDFLVDKKIKVPVELLDQSVSRIRSIIRKTDGDPD 120 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 L + G + + + W E + + + R Sbjct: 121 QTLSQMGFPPEKLRAAIELPLAWSIYASTQITP-----EKIQNYFAEHREELDGTRIEAR 175 Query: 182 TVLFSIPDNKLQNQGFVQKRI--KDAEESRLRLPKDCNKLEKFASKIHDVSIGKA-QYLL 238 +L D Q K ++ + ++ GK Sbjct: 176 HILLKPEDPSNQESIDKAKAQLADIRKQILDGKLTFAEAAVQHSTAPSKQDGGKLVPSAY 235 Query: 239 ESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + Q + + + P+ T G+ + K + + + Sbjct: 236 RGKMPLVLTQKIFPLEEGAISEPFQTPFGIHIAQLNKKHPG---QFSLEDVRGEIYRSLS 292 Query: 298 EKHEAEYVKKLRSNAII 314 + ++ LRS+A I Sbjct: 293 RSLWDKTIQSLRSSAKI 309 >gi|30249389|ref|NP_841459.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas europaea ATCC 19718] gi|30138752|emb|CAD85329.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas europaea ATCC 19718] Length = 264 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 86/305 (28%), Gaps = 46/305 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--EL 72 L+ + + + + + A S +NG I + + Q E+ Sbjct: 2 RLSKFLCVPLTVLGLVCVAPLNAQSGGTVAKVNGVAIPQSRLDLVVKAATAQGQPDSAEV 61 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + LI E + QE K G+ V Sbjct: 62 RNALRENLITEEILAQEAIKKGLDRSPEVVTQI--------------------------- 94 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 LA Q I + DFM + E+ + +K + + + + Sbjct: 95 ----DLARQGILIRAYQADFMRNNPVSDSELRKEYESVKAQMGDKEYKARHILVETEQEA 150 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 ++ K+ ++ E+ + G+ + + F + L + Sbjct: 151 KDLVAALKKGSAFDKL---------AGERSIDTGSKSNGGELGWSSAAVYVKPFADALIR 201 Query: 253 SQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + T+ P + G I + D R + +++ A V+ LR Sbjct: 202 LKKGETTSQPVQSPFGWHVIRLDDVRTAVP--PSFEEVKQNMQQRVLQRKFAAVVESLRK 259 Query: 311 NAIIH 315 NA + Sbjct: 260 NAKVE 264 >gi|311104077|ref|YP_003976930.1| chaperone surA [Achromobacter xylosoxidans A8] gi|310758766|gb|ADP14215.1| chaperone surA [Achromobacter xylosoxidans A8] Length = 532 Score = 99.4 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 35/358 (9%), Positives = 100/358 (27%), Gaps = 73/358 (20%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISK-------RIALLKLQKINGE-LEKIAVQ 78 P + + I ++ +VIT ++ + +Q + + L+ +Q Sbjct: 51 AAPAPAPQREQFVDGIAAVVDKDVITLRELRDASLRISGELKSRGIQVPDDQTLQHQVLQ 110 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 LI+E +++ E ++ GI D V+ A ++ ++K G + +++ L Sbjct: 111 RLIMERVQRHEADRLGIRVDDAQVDQAIQTIAARNKITVAQLRQEIEKSGTHWDGYRKSL 170 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI------------------------- 173 + + + + E+ A + + Sbjct: 171 RDEIRTDRLRQRAVDSTIVISDAEVDAFLKDQRRNPAFGAAPQAAPQPQPQAQPQPEPQQ 230 Query: 174 -----TVREYLIRTVLFSIPDNKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 Y + +L +P+ Q ++K+ + R + + Sbjct: 231 AAAPSGPMLYALAQILVRVPEGSSPEQLAALRKKAEGLLAQAKRGDDFASLAAAASDGPE 290 Query: 228 DVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK----------- 275 + G F Q + + ++ + G I + D+ Sbjct: 291 ALQGGVMGVRPLDGWPDLFVQAVSNLQKGQVSSLIQSGNGFHIIKVMDRGTAQPAPARTA 350 Query: 276 ----------------------RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + ++ + + ++ + ++++R Sbjct: 351 RAPAPAQAPQPAAAPAQAPAHQGPVEVMQTRARHILIKTSTVMSDELARQRLEQVRQR 408 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 14/140 (10%), Positives = 45/140 (32%), Gaps = 2/140 (1%) Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + + ++ Q+ + + K + +++ G+ + Sbjct: 378 MQTRARHILIKTSTVMSDELARQRLEQVRQRLVSGGAKFEDMARQYSQDATAPQGGELGW 437 Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD-LGGEIALKAYLSAQNTP 294 L + P F+ + + P + G I + ++R + + Sbjct: 438 LNPGETVPPFEAAMNALKPGEISQPVQSPFGWHLIEVEERRQHDATDDMARMKARQILFE 497 Query: 295 TKIEKHEAEYVKKLRSNAII 314 + + +++++LR+ A I Sbjct: 498 RRAQPAFEDWLEQLRAQAYI 517 >gi|283784267|ref|YP_003364132.1| peptidyl-prolyl cis-trans isomerase D [Citrobacter rodentium ICC168] gi|282947721|emb|CBG87276.1| peptidyl-prolyl cis-trans isomerase D [Citrobacter rodentium ICC168] Length = 624 Score = 99.4 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 39/397 (9%), Positives = 101/397 (25%), Gaps = 85/397 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +NG+ I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNGQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NGERNRMQQQLGDQYSELAANEGYMKTLRQQTLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNTGLSAEDFSSFLD---KQGIGDNHFKQYLAIQSIWPDVVK------------ 149 D + + + G+ + + Q L Q ++ Sbjct: 120 AIFSTPAFQVDGKFDNNHYNALVIQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K E E+ + ++ KN + R + Sbjct: 180 TDELAALVSQQRVVREATIDVQALAAKQQATEQEVASYYEQHKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + + Sbjct: 240 AAAMQKPVTDADVQSYYDQHQDEFTQPQRSRYSIIQTKTEDEAKAVLDALNKGGDFATLA 299 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L E+ + + +N K + + + G + D + Sbjct: 300 KEKSADIISACNGGDMGWLEEATMPDELKNAGLKEKGQLSGVIKSSVGFLIARLDDVQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + ++A+ K +K+ A Sbjct: 360 KVKPLSEVHDDIAAKVKQEKALDAFFALQQKVSDAAN 396 >gi|326316510|ref|YP_004234182.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373346|gb|ADX45615.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 642 Score = 99.4 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 41/406 (10%), Positives = 103/406 (25%), Gaps = 102/406 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58 M + + ++ ++ F +V I + S + ++G IT D Sbjct: 1 MFESIRKHSKVVM-IVLFLLIIPSFVLVGID-RNYFTSKSAVVARVDGHDITQDDWDNAH 58 Query: 59 RIALLKLQKINGEL----------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 R+ +++ + + ++ L+ + + + K + + Sbjct: 59 RMETDRIRAQSPSVDARLLDSPRARYATLERLVRDRVMQAAAVKMHLVTSDAQLARTLQG 118 Query: 109 HAR-------NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + L AE + + + QG+ F+ + + V+ Sbjct: 119 IPAIAALKRPDGSLDAEAYRALVGSQGLTPEGFENNVRRELSLSQVMGGVMGSAFAAQEP 178 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYL--------- 179 DF K + E+ A + + + Sbjct: 179 ARLALDSLYQRREIRVARFDAKDFAAKVTPTDDELQAYYKAHEAQFRQPEHADVQYVVLD 238 Query: 180 -------------------------------IRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 R I K +K A+ Sbjct: 239 LDAVRASITLSEDDLRSYYKENLERLAGKEERRASHILINAPKDAPAADREKAKARAQAL 298 Query: 209 RLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYV 262 ++ K N + A S G + D+ F++ + + ++ Sbjct: 299 LEQVRKAPNTFAEVARKNSQDSGSAPSGGDLGFFKRGDMVKPFEDAAFSMKKGDISDLVE 358 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++ G I + D + + + A+ ++ +L Sbjct: 359 SEYGYHIIQLNDVK--TPKQPTFEEVRAKLETEAKQQQAQRKFAEL 402 >gi|295096773|emb|CBK85863.1| Parvulin-like peptidyl-prolyl isomerase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 623 Score = 99.4 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 44/396 (11%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + SY ++ +NG+ I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSSYLIGGGANY-AAKVNGQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 A + + L + + LI E L Q + G+ V Sbjct: 60 AGERNRMQQQLGDQYSELAANEGYMKNLRQQTLNRLIDEALLDQYAKSLGLGISDEQVKK 119 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF--------- 152 N ++S +++ G+ + + Q L Q ++ Sbjct: 120 AIFSTQAFQSNGKFDNARYNSIVNQMGMTADQYAQALRNQLTTQQLINAVVGTDFMLKGE 179 Query: 153 ------------------------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K + E+ A ++ KN + R + Sbjct: 180 TEELAALVAQQRVVREATIDVNALAAKQQVSDAEVNAYYEQNKNNFISPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q + ++ + Sbjct: 240 AAAMQENATDAEIQSYYDQHQDQFTQPQRNRYSVIQTKTEAEAKAVLDELNKGADFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--R 276 + ++ I + G +L ES + +N K + + + G + D Sbjct: 300 KAKSTDIISAKNGGDMGWLEESTTPDELKNAGLKEKGQLSGVIKSSVGFLVARLDDIVAA 359 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 ++ ++A+ K +K+ A Sbjct: 360 KTKPLADVRDDIAAKVKQEKALDAFYALQQKVSDAA 395 >gi|261822503|ref|YP_003260609.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Pectobacterium wasabiae WPP163] gi|261606516|gb|ACX89002.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pectobacterium wasabiae WPP163] Length = 627 Score = 99.4 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 37/398 (9%), Positives = 109/398 (27%), Gaps = 87/398 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ ++ + + ++ F + + Y +NG+ IT G + + + Sbjct: 1 MMDNLRTAANNVVLKIILALIIASFVLTGVGDYLIGGSGDY-AAKVNGQEITRGQLEQAV 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + ++ +L K A+ +LI ETL Q K G+ + Sbjct: 60 QNERSRQQEALGENFSILASNDGYMQQLRKQALSQLIDETLLDQYANKLGLNISDEQIRQ 119 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 N E + + + G+ + + Q L Q +++ Sbjct: 120 AIFDVPAFQTNKHFDNEKYLDQVRRLGVTPDMYAQMLRKQLTSQQLIRGFGNTAFLLPQE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV----- 183 + E+ + + K + + Sbjct: 180 IDNLVKLAAQDRVVRVATIDVAAKAKALTVADDEVQSYYDQNKGRFIAPEEFKVSYITLD 239 Query: 184 --------------LFSIPDNKLQNQGFVQKRIKDAEESRLR------------LPKDCN 217 + + + +++ + + Sbjct: 240 AASIMDNVKIDDKAINDFYEQNKNDYSQPERKKFSVIQVKNEADATSVLDALKQGGDFAT 299 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ I + G ++ E+ + + + ++ + G + + D + Sbjct: 300 LAKEKSTDIISRRNGGDLGWMDENSTIDELKQAKLAEKGQVSSAIKSSVGYLIVRLDDVQ 359 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++A ++ + K + +K+ A Sbjct: 360 PQQVKPLSDVRAEIAEKVKHEKAQDGFYALQQKVSEAA 397 >gi|152968976|ref|YP_001334085.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893390|ref|YP_002918124.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Klebsiella pneumoniae NTUH-K2044] gi|150953825|gb|ABR75855.1| peptidyl-prolyl cis-trans isomerase D [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238545706|dbj|BAH62057.1| peptidyl-prolyl cis-trans isomerase D [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 624 Score = 99.4 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 41/396 (10%), Positives = 109/396 (27%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y + +NG+ I G + Sbjct: 1 MMDNLRTAANSVVLKIIFGIIIVSFILTGVSGYLIGGGKNY-AAKVNGQEIGRGQFENAV 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 A + + + + + LI E+L Q + G++ V Sbjct: 60 ASERNRMQQQLGDQFSELAANENYMKTMRQQVLNRLIDESLLDQYARELGLSISDEQVKQ 119 Query: 105 FFVQHAR---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 Q N + FS + + G+ + + Q L Q ++ Sbjct: 120 AIFQTQAFQTNGKFDNQRFSGIVAQMGMTTDQYAQALRNQLTTQQLINAIAGTDFMLPGE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K + EI A Q+ + + R + Sbjct: 180 SDQLAALVSQQRVVREATINVNALAAKQTASDEEINAFWQQNQARFMAPEQFRVSYIKMD 239 Query: 189 DNKLQNQGFVQKRIKDAEESRLRL-----------------------------PKDCNKL 219 +Q ++ ++ + + Sbjct: 240 AASMQESASDEEIQSWYDQHKDQFTQPQRNRYSVIQTKTEADAKAVLAELQKGADFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G ++ ++ P+ ++ K + + + G + D + Sbjct: 300 KEKSTDIISARNGGDMGWMEDASTVPELKDAGLKEKGQLSGVIKSSVGFLVARLDDVQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 QVKPLADVRNDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|315293370|gb|EFU52722.1| PPIC-type PPIASE domain protein [Escherichia coli MS 153-1] Length = 428 Score = 99.4 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 106/311 (34%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ + Q++ N + IP + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 V + A + ++ ++ G+ + +L F Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + G + + D R ++ ++ + +P ++ Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVK 306 Query: 305 VKKLRSNAIIH 315 +++ A I Sbjct: 307 REQI--AADIK 315 Score = 83.6 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 46/287 (16%), Positives = 93/287 (32%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q N + L + E S ++ + Sbjct: 143 NNEVRRRITI--LPQEVESLAQQVGNQNDASTELN-LSHILIPLPENPTSDQVNEAESQA 199 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V ARN + + Q + + IQ + + Sbjct: 200 RAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 259 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + KNI+V E R +L Q V KR + A + + Sbjct: 260 RSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARV-KREQIAADIKSGK 318 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 ++F+ G + P F++ + ++ + P + G I Sbjct: 319 TTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 378 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R++ + A K K + A ++++ R++A + Sbjct: 379 ELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 425 >gi|261344779|ref|ZP_05972423.1| hypothetical protein PROVRUST_06044 [Providencia rustigianii DSM 4541] gi|282567224|gb|EFB72759.1| peptidylprolyl cis-trans isomerase SurA [Providencia rustigianii DSM 4541] Length = 440 Score = 99.4 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 96/305 (31%), Gaps = 17/305 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ S + ++ +N V+ + D+ I +KL N L Sbjct: 7 LILGLVFASSASLAAPQQMDKVAAVVNNGVVLESDVQNMINTVKLNARNSGQQVPDDQTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ L+++ + Q + + VN AR GL+ L GI Sbjct: 67 RSQIIERLVMDNIMLQMANQMQLNIPEEAVNATIEDIARQNGLTLAQMEKRLVADGINMA 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L E+ A +M + E + IP + Sbjct: 127 KYRSEIRKEMLLAEVRNNEVRRRITILPQEVDALSNQMDSQANAEMGVNLSHILIPLPEN 186 Query: 193 QNQGF---VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + + +++ + G + +L F + Sbjct: 187 PTPEQLATAEALVSKVLSELKKGSDFGKLAIAYSADPQALKGGNMGWSRLQELPVVFSDQ 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDK-----RDLGGEIALKAYLSAQNTPTKIEKHEAE 303 + + P + G + + + + + ++ +++P + + Sbjct: 247 LKSSKKGDIVGPIRSGVGFHILRVNEISGGSQQPISVTEVKARHILLKSSPIMDDTMARQ 306 Query: 304 YVKKL 308 + +L Sbjct: 307 KLTQL 311 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 4/150 (2%) Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HD 228 + I+V E R +L QK + ++E R ++ + Sbjct: 278 QQPISVTEVKARHILLKSSPIMDDTMA-RQKLTQLSQEIRNGKISFEEAAKENSEDPGSA 336 Query: 229 VSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKA 286 + G+ + + P F++ +K + + P + G I + D R++ + A K Sbjct: 337 LKGGELGWNMPDVYDPAFRDALMKLKKGEISQPVPSSFGWHLIQLEDTRNVDKTDAAKKD 396 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + ++++ R+ A ++ Sbjct: 397 QAYRLLFNRKFNEEAQTWMQEQRAAAYVNI 426 >gi|114704782|ref|ZP_01437690.1| survival protein sura precursor (peptidyl-prolyl cis-trans isomerase sura) [Fulvimarina pelagi HTCC2506] gi|114539567|gb|EAU42687.1| survival protein sura precursor (peptidyl-prolyl cis-trans isomerase sura) [Fulvimarina pelagi HTCC2506] Length = 308 Score = 99.4 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 62/272 (22%), Positives = 106/272 (38%), Gaps = 5/272 (1%) Query: 47 NGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 NG +T I +R A LKL+++ G + A ELI E LK+QEI++ G+ VN + Sbjct: 35 NGMPVTTYQIRQRAAFLKLRRVGGNTTQKATDELIDEALKRQEIQRQGVNIPDEEVNAAY 94 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + A+ LS + L G FK Y+ +Q W + E + Sbjct: 95 LNFAKGNNLSEAQLAEVLGSAGFSPQAFKDYIRVQMGWGQAASRRIQREERLTEQDAVQR 154 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 Q + R ++A+ R R + FA + Sbjct: 155 MLAQGGEKPSTTEYTLQQVIFVIPNGQRGAMLANRKREAQAMRQRFQSC-DSTLAFAQGL 213 Query: 227 HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 DV++ + + +L ++ ++ S T T +GVE+I +C+ R + + A + Sbjct: 214 RDVTVRDLGRVAQPELPSLWKEDVMQTSPGRATPTKETDRGVEFIGVCNARQISDDRAAQ 273 Query: 286 AYLSAQNTPTKIEKHE---AEYVKKLRSNAII 314 A++ + A +KKLR A I Sbjct: 274 MVFQARDMESLNGDGSGADAALLKKLRDEAQI 305 >gi|285808215|gb|ADC35749.1| PpiC-type peptidyl-prolyl cis-trans isomerase [uncultured bacterium 293] Length = 392 Score = 99.4 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 103/291 (35%), Gaps = 17/291 (5%) Query: 37 AMSSRIRTTINGEVITDGDISKRI------ALLKLQKINGELEK---IAVQELIVETLKK 87 + R+ ++NG +++ + +R A + ++ L +QE I + L Sbjct: 28 EVLERVIVSVNGGIVSQSEFEQRQIAAVQGARIGPSEVEKYLRDNNARILQEAIDDLLLV 87 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF-SSFLDKQGIGDNHFKQYLAIQSIWPD 146 Q + G + V+ ++ + ++ L ++G+ + ++ + Q Sbjct: 88 QRASELGFKVPTTYVDETIEGIKKDNNIPSDQDLQDQLRREGMTLSDLRRNIERQVSRRW 147 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V++ + K + E A QK K + + + R +D Sbjct: 148 VLQRELEGKTSVSDAEARAEYQKNKAEYDKPGT----VTLREIVVGGEDAATRARAEDVA 203 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + + +S + G+ L +DL P ++ + T+P K Sbjct: 204 KRARAGEDFAALAKSTSSAASAKNGGELGQLSHTDLAPDLARIVFALPKGGVTDPVPVAK 263 Query: 266 GVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 G + + D+ + G +KA ++ + K Y++ LR A++ Sbjct: 264 GFRILKVEDRSEGGLVPFEQVKAEITRKLVQEKASGEYDRYIEGLRKXALV 314 >gi|261341042|ref|ZP_05968900.1| peptidylprolyl cis-trans isomerase D [Enterobacter cancerogenus ATCC 35316] gi|288316907|gb|EFC55845.1| peptidylprolyl cis-trans isomerase D [Enterobacter cancerogenus ATCC 35316] Length = 624 Score = 99.4 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 44/396 (11%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + SY ++ +NG+ I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSSYLIGGGANY-AAKVNGQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 A + + L + + LI E L Q + G+ V Sbjct: 60 AGERNRMQQQLGDQFSELAANEGYMNNLRQQTLNRLIDEALLDQYAKNLGLGISDEQVKK 119 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF--------- 152 N ++S +++ G+ + + Q L Q ++ Sbjct: 120 AIFSTQAFQSNGKFDNTRYNSIVNQMGMTADQYAQALRNQLTTQQLINAVVGTDFMLKGE 179 Query: 153 ------------------------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K + E+ A ++ KN V R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQQVSDAEVNAWYEQNKNSFVAPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 LQ ++ + Sbjct: 240 AAALQGNASDADIQSYYDQHQDQFTQPQRNRYSVIQTKTEADAKAVLDELNKGADFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 + ++ I + G +L + + +N K + + + G + D + Sbjct: 300 KAKSTDIISAKNGGDMGWLEAATTPDELKNAGLKDKGQLSGVIKSSVGFLVARLDDVQAA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KTKPLAEVRDEIAAKVKQEKALDAFYALQQKVSDAA 395 >gi|163743160|ref|ZP_02150542.1| PPIC-type PPIASE domain [Phaeobacter gallaeciensis 2.10] gi|161383577|gb|EDQ07964.1| PPIC-type PPIASE domain [Phaeobacter gallaeciensis 2.10] Length = 421 Score = 99.4 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 97/259 (37%), Gaps = 6/259 (2%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLK 86 ++ + + T+N V+T+ ++ +R L L + G+ +K A ++LI++ LK Sbjct: 32 VMFGPAPAAAQGLFAPAVTVNDAVVTNYELQQRARFLTLLRDPGDPQKKAREDLILDRLK 91 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 + ++GI + + A LS ++F + L + G+ + + + W + Sbjct: 92 LDVLAQAGIEPTEEEIVEGMTELAGRANLSLQEFLNVLGQNGVAPETLRDFTRVGIAWRE 151 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V ++ + E EI + V L ++ N Q + Q+ Sbjct: 152 YVAARYLAQARPSEEEIDRAMGLAGSGGVEVLLSELIMPINAQNAAQVEEVAQQ-----V 206 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQK 265 +++++ S G+ ++ ++L PQ Q ++ T P Sbjct: 207 SRITTTAAFSQAAQQYSATATRQSGGRLPWMPLTNLPPQLQQVVLGLRPGEVTAPLPLDG 266 Query: 266 GVEYIAICDKRDLGGEIAL 284 V + D R+ G Sbjct: 267 AVALFQLRDLRETSGAAPS 285 >gi|162449311|ref|YP_001611678.1| peptidyl-prolyl cis-trans isomerase SurA [Sorangium cellulosum 'So ce 56'] gi|161159893|emb|CAN91198.1| peptidyl-prolyl cis-trans isomerase SurA [Sorangium cellulosum 'So ce 56'] Length = 338 Score = 99.4 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 33/314 (10%), Positives = 89/314 (28%), Gaps = 31/314 (9%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI------------NGELEKIAVQEL 80 +S RI + I D+ +R LQ ++ + +Q++ Sbjct: 22 LAHAVVSERIVAVVGDRAILLSDLRQRARPFLLQIQARVPPGAQQAAAESQVFRDLLQKM 81 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED-FSSFLDKQGIGDNHFKQYLA 139 + E L+ Q EK+ + S + F A ++ E+ F + G+ + ++ + Sbjct: 82 VDEELEGQAAEKANVRVTSEEIENAFRNIAAAEQMTVEELFRTARASSGLTEQEYRDEIR 141 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQK---MKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + +++ + E ++ + + + + VL +P + + Sbjct: 142 RQILEGKMLQLRVKGRVRITEQDVRSAFDRLVREERRRRDYHPAWIVLRVLPGSSAEAVE 201 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLES------------DLH 243 + E +F+ G Sbjct: 202 ERRALAAALAERARGGEDFAALARQFSDDTATREEGGDLGVRAPQGTQAAVTGQRQVMAP 261 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHE 301 L+ P + + ++ A + + + + K + Sbjct: 262 ELEAALMAIEPGGVAGPMRAGDAFVIMKLLSRQPSRFTTLEAARPEVLQRLQAEIMTKAK 321 Query: 302 AEYVKKLRSNAIIH 315 +++ L+ + Sbjct: 322 QKWLDDLKRGTHVE 335 >gi|229591358|ref|YP_002873477.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens SBW25] gi|229363224|emb|CAY50307.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens SBW25] Length = 624 Score = 99.4 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 111/403 (27%), Gaps = 90/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISKR 59 M + + +I ++ + I + + +S+ +NGE IT ++S+ Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIVALMAFTGIEAIFQASGNSKQDVAKVNGEEITQTELSQA 60 Query: 60 IALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 + + + Q + L + A++ LI L Q S F ++ Sbjct: 61 VDMQRRQLMQQLGKDFDASLLDEKLLREAALKSLIDRKLLLQGAADSKFGFSEAALDQVI 120 Query: 107 ---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML--------- 154 + + +AE F + + G F+Q L + + V Sbjct: 121 LQTPEFQVDGKFNAERFDQVIRQLGYSRLQFRQMLTQEMLIGQVRAGIAGSGFVTDSEVL 180 Query: 155 ----------------------KYGNLEMEIPANKQKMKNITVREYLIRT---------- 182 + E+ A + + + Sbjct: 181 AFARLEKQTRDFATVNIKANPAAVKLTDDEVKAYYDQHAKEFMTPDQVVIDYLELKKSSF 240 Query: 183 ---------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL-------------- 219 L + + N ++ E ++ K Sbjct: 241 FDQVAVKDDELQAAYQKETANLAEQRRAAHILIEVNDKVTDAQAKAKIEEIQARLAKGEK 300 Query: 220 -----EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 ++F+ + G + P F+ L S++ + P + G I + Sbjct: 301 FEALAKEFSQDPGSASNGGDLGFAGPGVYDPDFETALYALSKDQVSAPVRSTFGWHLIKL 360 Query: 273 CDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + +LK L+ + ++E+ E K+L A Sbjct: 361 LGVEAPQVPTFASLKDKLTKELKTQQVEQRFVEATKQLEDAAF 403 >gi|149280301|ref|ZP_01886423.1| peptidyl-prolyl cis-trans isomerase (survival protein) [Pedobacter sp. BAL39] gi|149228990|gb|EDM34387.1| peptidyl-prolyl cis-trans isomerase (survival protein) [Pedobacter sp. BAL39] Length = 454 Score = 99.4 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 92/308 (29%), Gaps = 14/308 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--L 72 + V + + + ++ + VI DI+++ A + Sbjct: 1 MKKFLVVAGGLICLFLNTQAQRQSVDKVVAVLGSNVILLSDINQQYAQYLNSGNPSNESV 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + ++EL+ L KQ+ E + D + V+ Q R A Sbjct: 61 KCLILRELLTTKLLKQQAEIDSVMVDDSQVDEEVDQRMRYQIQRAGGEERLEQFLNRSIL 120 Query: 133 HFKQYLAIQSIWP---DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 +K + + +K + +E+ K ++ + + I Sbjct: 121 QYKDEIRPEIKEQMISRKMKGNITQDVSVTPLEVKKYFDSYKKDSLPDIPTEFEVGEIVL 180 Query: 190 NKLQNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQ 245 + + Q+ + RLR + ++ G + + + + Sbjct: 181 HPTLTKAEKQRFYDKIDALRLRVKSGEDFAFLAKSYSEDPGSAPDGGDLGFFDRAQMVKE 240 Query: 246 FQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAE 303 F K + + T+ G + + ++R GE ++ + T + + Sbjct: 241 FTAWAFKLKAGEISPVFETEHGYHILQVIERR---GEQVQARHILIRPQNTPQSMERLKL 297 Query: 304 YVKKLRSN 311 + + N Sbjct: 298 HADSIYKN 305 >gi|312961785|ref|ZP_07776283.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens WH6] gi|311284044|gb|EFQ62627.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens WH6] Length = 624 Score = 99.0 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 49/403 (12%), Positives = 112/403 (27%), Gaps = 90/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISKR 59 M + + +I ++ + I + + +++ +NGE IT ++S+ Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIVALMAFTGIEAIFQASGTNKQDVAKVNGEAITQPELSQA 60 Query: 60 IALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 + + + Q + L A++ LI L Q S F ++ Sbjct: 61 VDMQRRQLMQQLGKDFDASLLDEKLLRDAALKGLIDRKLLLQGAADSKFGFSEAALDQVI 120 Query: 107 ---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML--------- 154 + + +AE F + + G F+Q L + + V Sbjct: 121 LQTPEFQVDGKFNAERFDQVIRQLGYSRLQFRQMLTQEMLIGQVRAGIAGSGFVTDAEVL 180 Query: 155 ----------------------KYGNLEMEIPANKQKMKNITVREYLIRT---------- 182 + E+ A + + + Sbjct: 181 AFARLEKQTRDFATVNLKANPAAVKLTDDEVKAYYDQHAKEFMTPDQVVIDYLELKKSSF 240 Query: 183 ---------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL-------------- 219 L + + + N ++ E ++ + K Sbjct: 241 FDQVTVKDDELQAAYEKETANLAEQRRAAHILIEVNDKVTEAQAKAKIEEIQARLAKGEK 300 Query: 220 -----EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 ++F+ + G + P F+ L Q+ + P + G I + Sbjct: 301 FDALAKEFSQDPGSANNGGDLGFAGPGVYDPDFETALYALKQDQVSAPVRSTFGWHLIKL 360 Query: 273 CDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++ +LK L+ + ++E+ E K+L A Sbjct: 361 LGVEAPEVPTFASLKDKLTRELKAQQVEQRFVEATKQLEDAAF 403 >gi|215485522|ref|YP_002327953.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli O127:H6 str. E2348/69] gi|215263594|emb|CAS07924.1| peptidyl-prolyl cis-trans isomerase D (rotamase D) [Escherichia coli O127:H6 str. E2348/69] Length = 623 Score = 99.0 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKNLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|328950420|ref|YP_004367755.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinithermus hydrothermalis DSM 14884] gi|328450744|gb|AEB11645.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinithermus hydrothermalis DSM 14884] Length = 308 Score = 99.0 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 30/320 (9%), Positives = 90/320 (28%), Gaps = 35/320 (10%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL------------ 63 + + ++ + ++P + A + ++GE I ++ + L Sbjct: 1 MKRFLMVGLLILLPF----AAAQQDVVVAEVDGEPILLSELDLQFELFLRGVFGQQGVPI 56 Query: 64 --KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 +L+ L+ ++ L+ + + Q K+G+ V + SA S Sbjct: 57 TDELRARFAPLKAQILERLVRDRVVLQAARKAGLAASEEAVRERLMGIKEQFPDSAAFES 116 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVK-NDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + ++ Q + + + + L+ M + + E + Sbjct: 117 ALEASGIPSEDVLLQLMREAQTYNNYLDWLRPQLRISEPAMRLYYYLDRASFAEPEELCV 176 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 +L + + + + + + + G Sbjct: 177 SHILVRTREEAEAVLERLNA-----------GEAFEDLANQLSIDPGSNTTGGALGCHPA 225 Query: 240 SDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 F+ ++ T P ++ G I + R + + + Sbjct: 226 GTFIEPFERAARRLEVGELTRTPVESEFGFHVIRLDGFRPARV--PPFEAVRGEIEARFL 283 Query: 298 EKHEAEYVKKLRSNAIIHYY 317 ++ +++ L A + + Sbjct: 284 DRAVRQHLDYLFERAEVRTF 303 >gi|109899437|ref|YP_662692.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudoalteromonas atlantica T6c] gi|109701718|gb|ABG41638.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudoalteromonas atlantica T6c] Length = 627 Score = 99.0 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 39/404 (9%), Positives = 104/404 (25%), Gaps = 98/404 (24%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ + V++ F + SY + + + +N + I+ D+ + Sbjct: 1 MLERIREGTQGTWAMAILGLVILSFVFAGVGSYIN-SSAETAAAKVNDDTISQADLERAY 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + + + LI + L +Q G+ + Sbjct: 60 QNERGRMESQYGEAFAALTADSAYLQQFRQGVLDRLIGDKLLEQAAIDMGLRVSDAQIKQ 119 Query: 105 FFVQHARNTGLSAEDFSSFLD---KQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 V D + + G N F+ Y+ + + Sbjct: 120 AIVAMPEFQFDGKFDNERYTAVLRQAGFQPNEFRDYMRVDMTRRQLSNALLGSEFTLAAE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVR------------ 176 F + ++ Q Sbjct: 180 TTQAYKLQQQTRDARYLTIPAESFKDGINVSDDDVENYYQANITQFDTEQKVSLAYVELS 239 Query: 177 ----------------EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-- 218 +Y + + + + + + D + +R + +K Sbjct: 240 VDDLLTDIVVSDDEALQYYEQNIQDFRTQEERRASHILIEFGDDEQGARQQAEDVLSKIN 299 Query: 219 ----LEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGV 267 + A + + G + + P F+ + + ++ ++ G Sbjct: 300 DGGDFAELAKEYSSDTFSAENGGDLDWFSAGMMDPAFEEATYALANVGDVSSVVESEFGY 359 Query: 268 EYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 I + D + + +K + A+ + E+ Y K+LR Sbjct: 360 HIIKLTDIKPEETSPFTDVKEDVIAKLKSERAEEEF--YAKQLR 401 Score = 35.4 bits (79), Expect = 9.9, Method: Composition-based stats. Identities = 31/254 (12%), Positives = 75/254 (29%), Gaps = 10/254 (3%) Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 ++++ + +L E +++ K + + + + + + Sbjct: 377 DVKEDVIAKLKSERAEEEFYAKQLRMAEVAFETPDTLDEVAAIAEVDVNTTVMFSQDSVP 436 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + Q+ +++ + L + R + V I D Sbjct: 437 AAVNYPNVVAQAFSDELINDQVNSDVIELGDNHVMFVRVANYEAQRTKALEEVSPEINDI 496 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-- 248 L Q + AE + + + + E +K + +A S + P Sbjct: 497 LLAEQAQQAAKEW-AETLLVDIKAEQDVSESLQAKAVEWQEQEAVARSGSQISPALVTAL 555 Query: 249 ----LLKKSQNNTTNPYVTQKG-VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 K+S + G V+ + + D +L L + + + + E Sbjct: 556 FKLTEDKESNAQVVELFNGDVGLVQLMKVNDGAELPSTDVAA--LQNRLSTMRAQFTYGE 613 Query: 304 YVKKLRSNAIIHYY 317 +V LR A + Y Sbjct: 614 FVNALREQADVEIY 627 >gi|256545179|ref|ZP_05472545.1| foldase protein PrsA 1 [Anaerococcus vaginalis ATCC 51170] gi|256399220|gb|EEU12831.1| foldase protein PrsA 1 [Anaerococcus vaginalis ATCC 51170] Length = 339 Score = 99.0 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 95/286 (33%), Gaps = 23/286 (8%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKL-QKINGELEKIAVQELIVETLKKQEI 90 S K + + GE IT ++ +L+ VQ L+ + L ++ Sbjct: 40 SAKGEKLPDDAVALVGGEKITKDSYKDEMSFYSAMLASRQQLKPSIVQMLVQDKLIADDM 99 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 +K+ + D ++ F+Q+ + G + D D + + + Sbjct: 100 KKNNVKVDDKALDDKFLQYVQQFGGQEKFDKMLEDYNMSSDKFKETIKKDEIYQKH--RA 157 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 F K E +I ++ K+ + ++ + K +E Sbjct: 158 WFEEKNPVDEKQIKKYYEENKDTLSQVKASHILV------------ADEATAKQVKEKLD 205 Query: 211 RLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVE 268 ++++ + G Y + + +F + ++ ++P T G Sbjct: 206 NGEDFAKLAKEYSKDTANAEKGGDLGYFTKDKMVKEFADKAFSMKKDEVSDPVKTSYGYH 265 Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I + DK+D ALK +S K ++Y+ L + A + Sbjct: 266 IIKVTDKKDSP--EALKDEISKTLNDKK----YSDYLTDLFNKAKV 305 >gi|218779881|ref|YP_002431199.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfatibacillum alkenivorans AK-01] gi|218761265|gb|ACL03731.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfatibacillum alkenivorans AK-01] Length = 327 Score = 99.0 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 91/297 (30%), Gaps = 17/297 (5%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------GELEKIAVQELIVETLKKQ 88 A + +NG I I+ LL + L+K ++ +I + Q Sbjct: 27 GMAEPGEVLARVNGVNIYGWQITLAENLLFGSRNPHVHTESQTLKKEILKNVIDMEVLFQ 86 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 + +K GI D V+ F + + S ++ S L + + + Sbjct: 87 DAQKRGIEPDKRLVDGFVWNYKASF-PSLAEYQSALRGMNATEREIVDLAGRIVVMGACI 145 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 + + E E + N R +R +L K + + R + Sbjct: 146 EERYGALLTPTEAEAQKYYDENPNDFVLPRALRVRHILIKKDAAKGVDGKTAKARAQQIL 205 Query: 207 ESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLES-----DLHPQFQNLLKKSQNNTTNP 260 + + + + G Y+ E +L P + +LK NP Sbjct: 206 ARVKKGGEPFAIIAREASDGPEKDQGGDMGYVSEGALKNTELEPLEKVILKLQPGEIGNP 265 Query: 261 YVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T G + D+R + +K L + K+ + + +L+ I Sbjct: 266 VETDIGFHIVKALDERPESITPFETVKERLISALQKKKMVEALNQLASELKPGFDIE 322 >gi|157164251|ref|YP_001467105.1| holo-[acyl-carrier-protein] synthase [Campylobacter concisus 13826] gi|112801387|gb|EAT98731.1| foldase protein PrsA [Campylobacter concisus 13826] Length = 272 Score = 99.0 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 91/301 (30%), Gaps = 42/301 (13%) Query: 25 FCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISK----RIALLKLQKINGELEKIAVQE 79 F ++S + + + T++G+ I D DIS + K+ +K + + Sbjct: 4 FLFPAVLSLAAAVTLNAAVVATVDGDAINDSDISALLSAAMPGFDASKLQPNEKKRIIDD 63 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 LI L ++ + SGI D + + A Sbjct: 64 LINRKLLLKDAKASGIEKDVDYIKAV-------------------------------KAA 92 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + I ++ + ++ K K + R + D K N Q Sbjct: 93 QEGIAVELYMRKLFDGIKVSDSDLRDFYNKNKASMNQPAQARARHILVEDEKTANDIIAQ 152 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT-- 257 + E + + ++ K K G+ + +S + F + N T Sbjct: 153 LKNLKGEVLTKKFAELASQ--KSIDKGSAAHGGELGWFGQSQMVKPFADAAFSMANGTVS 210 Query: 258 TNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T P TQ G I D + G K + K + + + LR A I Sbjct: 211 TKPVKTQFGYHVILKEDGKAAGTVSFEQAKPEIEQAVKMEKFQAAVRQKSEALRQKAKIE 270 Query: 316 Y 316 Y Sbjct: 271 Y 271 >gi|116254033|ref|YP_769871.1| foldase/peptidyl-prolyl cis-trans isomerase [Rhizobium leguminosarum bv. viciae 3841] gi|115258681|emb|CAK09785.1| putative foldase/peptidyl-prolyl cis-trans isomerase [Rhizobium leguminosarum bv. viciae 3841] Length = 293 Score = 99.0 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 85/301 (28%), Gaps = 49/301 (16%) Query: 22 LIIFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISKRIALL---KLQKINGELEKIAV 77 L + V+ ++ A + + + I ++ +A L Q + + + A+ Sbjct: 7 LAVLAFATFVALQAPAYADDAVIAKVGTLEIHQSELDLAVANLDPQLAQLPDDQKKVAAL 66 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 I L A D ++ Q QY Sbjct: 67 SAAIDVKLL------------------------------AADAAAEKLDQTDEFKKRMQY 96 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 L+ + + K + E++ +K+ E R +L Sbjct: 97 LSDRELHNAYFKKHVVDIVTPDEVKARYDKEVAALPKQEEVHARHIL-----------VK 145 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256 + KD + ++ ++ + G Y + +F++ + Sbjct: 146 TEDEAKDIIKQLDAGKDFAELAKEKSTDPNKSEGGDLGYFSRGRMVKEFEDAAFALEKGT 205 Query: 257 TTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + DKRD + Q + E + K +++A I Sbjct: 206 YSKTPVKTDFGFHVIKVEDKRDAPP--PPFEQVQDQVRQLVMRDKYLELLNKAKASAKIE 263 Query: 316 Y 316 Sbjct: 264 I 264 >gi|307721593|ref|YP_003892733.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfurimonas autotrophica DSM 16294] gi|306979686|gb|ADN09721.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfurimonas autotrophica DSM 16294] Length = 276 Score = 99.0 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 89/301 (29%), Gaps = 41/301 (13%) Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK-------INGELEKIAVQ 78 ++ + S++ T+NG+ IT D+ + + + +Q Sbjct: 6 MLLSALLLTGSIASAKTLVTVNGKAITQQDVDTELMNATQGRFNQVPADRQAAFRQQVLQ 65 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 +LI + L + +KSGI + + + Sbjct: 66 QLIGKELIYNDAKKSGIINSKEYKSEY---------------------------KKLEQR 98 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + V + + E+ K K + + + + Sbjct: 99 MKKELAIQVWQKKLLDSIKISNKELKDYYNKNKEEFNEKESVHARHILVKAEDEAKKIIA 158 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257 Q + E+ + + +K ++ G Y + + P F + + Sbjct: 159 QLKSLSGEKLKEKF---IELAKKESTGPSGPKGGDLGYFSKGQMVPAFNDKVFSMKKGEV 215 Query: 258 T-NPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T P TQ G I + DK+ +KA++ + K + + + L+ A I Sbjct: 216 TLKPVKTQFGYHVIYVEDKKPSMTRSFDEVKAFIEQRLKMEKFKAVMKKKMDALQKKAAI 275 Query: 315 H 315 Sbjct: 276 K 276 >gi|294101095|ref|YP_003552953.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aminobacterium colombiense DSM 12261] gi|293616075|gb|ADE56229.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aminobacterium colombiense DSM 12261] Length = 282 Score = 99.0 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 40/318 (12%), Positives = 91/318 (28%), Gaps = 48/318 (15%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKRIALLKLQ 66 + +KLL ++ + + K S ++ + I D+ I L Q Sbjct: 1 MRKNVKLLIAMAIIATVVLSGVAGAKEVEKSDGDKVLAQVGDVEIKGQDVEDVIKSLDPQ 60 Query: 67 KI----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 + N + K ++ELI + + +++ + D Sbjct: 61 QRMYYENEQGRKAILEELINLEVFVRWAQENDVEKD------------------------ 96 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + + + + ++ F E E + IR Sbjct: 97 ------PIFIERLENIKREILRQVALEKMFG-NVSVSEKEARDYYTAHVTDFMIPSQIRA 149 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + ++ + EE + + +K++S G Y + Sbjct: 150 SHILV--------ENEEEAKRIREEIKTEKITFEDAAQKYSSCPSKAQKGDLGYFQSDQV 201 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEK 299 P+F Q + + P +Q G I + DK+ +K + K + Sbjct: 202 VPEFSQAAGALKKGEISAPVKSQYGWHIIRLEDKKPGSLQPFEEVKGQIETNLLREKRAQ 261 Query: 300 HEAEYVKKLRSNAIIHYY 317 + ++LR + + Sbjct: 262 IYTDETERLRKQYGVKVF 279 >gi|251772783|gb|EES53345.1| probable peptidyl-prolyl cis-trans isomerase [Leptospirillum ferrodiazotrophum] Length = 289 Score = 99.0 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 87/320 (27%), Gaps = 52/320 (16%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++F + F + + L + + + S +S + + IT + I Sbjct: 1 MNFRIFPTSGSFHRGM--ALPLTLLAGLSLTSGCHQTLSDNVVAKVGTREITKESLQSAI 58 Query: 61 ALLKL-QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 + L + + LI L E+ Sbjct: 59 KDMNLPSSAPASVPSDVLNRLID------------------------------NTLITEE 88 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + + + ++K K + ++ K + + Sbjct: 89 AEQEGLPNRPDIRKKLEDARNRILRQALIKTQVDDKVKVTDADVQGYFDKHRQEIKQ--- 145 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 V++ I +++ R+ K + F+ I G + E Sbjct: 146 -------------PGYVEVRQLIIPDQKTADRIVSSLRKKKGFSRAIEKFKGGPVGKIFE 192 Query: 240 SDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTK 296 + PQF + + T P + G+ Y I + KA ++ T Sbjct: 193 GTVPPQFAKFFFGVPAGSVTGPIALKDGIHYFKIDKQVPGKLLSFDQAKAGITQFLTSRM 252 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 + +Y+ LR+ I Sbjct: 253 KQDLYQKYLNSLRAKTKIEI 272 >gi|289208891|ref|YP_003460957.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thioalkalivibrio sp. K90mix] gi|288944522|gb|ADC72221.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thioalkalivibrio sp. K90mix] Length = 289 Score = 99.0 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 36/280 (12%), Positives = 78/280 (27%), Gaps = 47/280 (16%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 +N IT D+ A + + + E+I L +QE K G+ D Sbjct: 48 EDTVAIVNDRAITRADL-FTYAGMDEDPGLATQGEGVLDEVISLELLRQEALKRGLGDDP 106 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + + + +++ + Sbjct: 107 EIQR------------------------------ILKMVETNLLASMLMERIAEELEISE 136 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 E +++++ + EY R +L + ++ Sbjct: 137 EDVEAEYERQVEYLRGTEYRARHIL-----------VEDEDSARELLAQLDDGADFAELA 185 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKR 276 E+ + G + + P+F + TT+ P +Q G I + D R Sbjct: 186 EEHSIDPGSAARGGDLGWFTPDGMVPEFAAATEALEPGETTDAPVQSQFGWHLIRLDDTR 245 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ + A+ + E ++ LR+ A I Sbjct: 246 EVEV--PPLDEVRAEIIEILESRAIQEKLEALRAEATIEI 283 >gi|241761719|ref|ZP_04759806.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260752284|ref|YP_003225177.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|241374027|gb|EER63560.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258551647|gb|ACV74593.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 471 Score = 99.0 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 47/291 (16%), Positives = 97/291 (33%), Gaps = 21/291 (7%) Query: 44 TTINGEVITDGDISKRIALLKLQ----------KINGELEKIAVQELIVETLKKQEIEKS 93 +NG +IT+ DI +R AL+ + ++ LI ETL+ QE + + Sbjct: 73 AIVNGTIITNTDIEQRFALILASAGGDVSRISEEDRNMARLQILRNLIDETLEIQEAKAN 132 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 I ++ F +ARN + E FS+ L G K+ + W ++ Sbjct: 133 DIIITPTELDQIFEHYARNMKKTPEAFSADLQAIGSSAKSVKRQVEADMAWRRLLGRRVE 192 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL--- 210 E+ +MK ++ +F ++ + + + + + Sbjct: 193 PFVNISNEEVQNIINRMKAAKGKDEYHIAEIFFSANDTNRAEVRAKANKIQDQILQRGNT 252 Query: 211 --RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGV 267 R+ +++ G ++ L ++K + P T G Sbjct: 253 NERMGLFSAFASQYSEASSAARGGDMGFIQAEQLPDALAAVVKNMPVGSLMGPIETPGGF 312 Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKI-----EKHEAEYVKKLRSNAI 313 +A+ +K+ + G A ++ + + E KLR Sbjct: 313 SIVALLEKQQILGIDPKDAIVALKQIYVNFPPGTSQNVADEKTAKLRDATK 363 Score = 44.7 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVT-QKGVEYIAICDKRDLGG-EIALKAYLSAQNT 293 + + P QN++ K +T P+ + Q+GV + +C + D + + Q Sbjct: 388 ISIRSMPPLLQNMVAKLQVGESTLPFGSIQEGVSVLVVCGRDDPKVAKQPNFQQIHNQLQ 447 Query: 294 PTKIEKHEAEYVKKLRSNAIIHY 316 ++ K Y++ LR +AII Y Sbjct: 448 EDRVNKRAIRYLRDLRRDAIIDY 470 >gi|323701603|ref|ZP_08113275.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfotomaculum nigrificans DSM 574] gi|323533376|gb|EGB23243.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfotomaculum nigrificans DSM 574] Length = 341 Score = 99.0 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 98/307 (31%), Gaps = 30/307 (9%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------------ELEKIAVQELI 81 + ++ + T+NG+ IT ++ K++ + Q +LEK + +LI Sbjct: 23 ASNNADVVATVNGKEITRAELDKQVNMTVEQYKQQGIDLTSKENKDMKAQLEKSVLDDLI 82 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 +TL QE E+ +T V+ G EDF L + + + ++ + + Sbjct: 83 TKTLLMQEAERQKLTPSKEEVDKSIKDIKATFG-KEEDFKKALAEVKMTEQDVREDITFR 141 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + +V E EI + K+ + + + Sbjct: 142 LTYQKLVDKVTADVKAPTEAEIAKYYNEHKDQFGTPERLEVKHILFAFDGKVPNAPKRTE 201 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES-----------DLHPQFQNLL 250 + + ++L L + K FA+ + S + Sbjct: 202 AEALQAAKLALAEITQKGRDFAAVAREKSD-DLGTRENGGSYTVDKGAGTTDPAFEKAAA 260 Query: 251 KKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKK 307 T P + G I + + +K ++AQ + +++V + Sbjct: 261 ALKPGEITKQPVKSAYGYHLIKLEKIEPATQKSLAEVKDQIAAQLESEAKQAKFSQFVDE 320 Query: 308 LRSNAII 314 L+ A I Sbjct: 321 LKKKAEI 327 >gi|300997370|ref|ZP_07181710.1| PPIC-type PPIASE domain protein [Escherichia coli MS 200-1] gi|300304189|gb|EFJ58709.1| PPIC-type PPIASE domain protein [Escherichia coli MS 200-1] Length = 623 Score = 99.0 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 36/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G ++ ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWVEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|226227552|ref|YP_002761658.1| putative peptidyl-prolyl cis-trans isomerase [Gemmatimonas aurantiaca T-27] gi|226090743|dbj|BAH39188.1| putative peptidyl-prolyl cis-trans isomerase [Gemmatimonas aurantiaca T-27] Length = 463 Score = 99.0 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 30/297 (10%), Positives = 84/297 (28%), Gaps = 26/297 (8%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETLK 86 I + +VI ++ + + Q +LE+ A+Q+LI L Sbjct: 42 SKTIPVDGIAAIVGDQVILVSEVMSSVNSARAQGAKIESAKDLSKLEQDALQQLIEAELL 101 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARN---TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 Q+ + I + + + + +F L + G G + + + + Sbjct: 102 VQKAKLEKIEVNDVELQSGVDSREKQARGNFSTDAEFRQALKENGFGTVEEWRKMQLDAA 161 Query: 144 WPDVVKNDFMLKYGNL------------EMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 ++ + M K E + +R ++ + ++ Sbjct: 162 RRSKLQQEVMQKLQRDGKVTAVNVTNAEIDEAYEEAKTQLPRKEARVGMRQIVVATKPSE 221 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + K + N ++ + G + + P+F ++ Sbjct: 222 DAKKKARVKIDSLRAQLDKHPEDFENIAKRESMDGTRELGGDLGWNRRGRMVPEFDRMMF 281 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + T G I + + ++ + T +++ + + Sbjct: 282 ALNPGVISPVLETGFGYHIIRVDRVQPA---EVKARHILIRPTVDSVDEGRTKLLAD 335 >gi|315180639|gb|ADT87553.1| peptidyl-prolyl cis-trans isomerase D [Vibrio furnissii NCTC 11218] Length = 619 Score = 99.0 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 37/403 (9%), Positives = 103/403 (25%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y + S+ + G I G+ + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYL-ISGSNNAAAKVGGTEIGRGEFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + K + +I + L Q + G+ + Sbjct: 60 QNERNRMQSQLGDYFSNLLADPEYVASFRKSVLDRMINDLLLDQHAQALGLRVSDTQIRQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + + E + S L + G + F +Y+ + ++ Sbjct: 120 MILDMPQFQTDGKFDQEIYQSALRRAGFSPDSFAEYMRRDLVRNQLLSALQGSEFTLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +F + EI ++ R ++ + Sbjct: 180 VEAQGELITQTRDIRTITLSPAEFAKSIELSDDEIEQYYKQNSERYTRPEQVKLSYIELS 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 +L+N + +K + + Sbjct: 240 AEQLKNAITISDEQAKQYYESHMDKYSSAEQRQVSHILIQGDDEKAAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + I G ++ + P F++ K + + + G I + Sbjct: 300 ATLAKEKSQDIGSAEEGGSLGWIEHDTMDPAFESAAFALKKAGDVSGLVKSDFGYHIIKL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 D + + A + ++ + E +L A Sbjct: 360 DDVKAPVAKPYAEVAADIKSELKDQQAIDKFYELQTELEKVAF 402 >gi|330993926|ref|ZP_08317856.1| Chaperone surA [Gluconacetobacter sp. SXCC-1] gi|329758872|gb|EGG75386.1| Chaperone surA [Gluconacetobacter sp. SXCC-1] Length = 462 Score = 99.0 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 86/257 (33%), Gaps = 9/257 (3%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKI-------NGELEKIAVQELIVETLKKQEIEKSG 94 I T+NG V+T D+ R L L L V++LI E L+ QE+ Sbjct: 67 IIATVNGAVLTKRDVDTRGRLFALSSGLDVSDDVMQRLRPQIVRQLIDEKLRMQEMLDRH 126 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 I + + G+ + L + G+ + +Q W V++ + Sbjct: 127 INVPIQQIADAIAGIEQRNGMPQNALRNKLAEDGVSLTTLIDQIRVQLGWTQVLRQETGE 186 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + +I + +K + + + +F ++ + + K + + + Sbjct: 187 RGRITAADIEQRTEALKREDGKPEYMISEIFVPVEDPRHTENEL-KFTETIIQELRQGAP 245 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273 +F+ + G ++ E L K +NP G I Sbjct: 246 FPVVAAQFSQGQSALDGGMMGWMQEDGLDPQVVDVARKMPDGAISNPIRVAGGYVIATIA 305 Query: 274 DKRDLGGEIALKAYLSA 290 ++R +G ++A + Sbjct: 306 ERRTVGHQMATILSIRQ 322 >gi|113970826|ref|YP_734619.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-4] gi|113885510|gb|ABI39562.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-4] Length = 621 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 39/407 (9%), Positives = 91/407 (22%), Gaps = 95/407 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ I V++ F + SY + S +NG+ IT ++ + Sbjct: 1 MLEKIRDGSQGVIAKGILVLVILSFAFAGVSSYLG-SQSDVPAAEVNGDKITKAELEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +++ ++ L+ + L Q G+ + Sbjct: 60 QSERARMEQQLGEMFAALSADERYLESIKQSVLERLVADKLIDQAAAAMGLRVSDEQIIA 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + + + + L + G F+ + + + Sbjct: 120 AIKSEPAFQTDGKFDNDRYQAILRQLGYQPQTFRSMMRVDMTRRQLTAALVGTEFVLPGE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS-- 186 F+ + ++ + + + Sbjct: 180 AKQLAELQGQTRDIRYLVVDSAPFLANASVTDEQVKNYYDTNQGQFMSPEKVSLEYVELN 239 Query: 187 ---IPDNKLQNQGFVQKRIKDAEESRLRLPK----------------------------- 214 + Q + + + K Sbjct: 240 SADFAKDSKVTDEEAQAYYDEHKTQYVSNEKRLAAHILIGPGSDEAAAKAKAEDLAKQLD 299 Query: 215 DCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVE 268 + + A GK + + P F L + + T G Sbjct: 300 NGADFAELAKANSEDTLSAEQGGKLDWFEPGVMDPSFDTALFALKKGEHSAVVKTDFGFH 359 Query: 269 YIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 I + D + +KA + AQ K KL + Sbjct: 360 IIKLLDVQPGTTVPFADVKAKIVAQLQEKKAVDQFYSLQSKLADTSY 406 Score = 40.4 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 39/131 (29%), Gaps = 4/131 (3%) Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + K+ + E +R + + +++ A+ + + K + Sbjct: 487 EVKADISDRLKQDQANEAARAKAQELMTQVKAGAADVTLTAKAKLGRGAQDVDAAIVGKA 546 Query: 250 LKKSQNNTTNPYVT---QKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYV 305 + + T T G IA+ L L + E + Sbjct: 547 FQMPTPSATPVVDTVGLANGYAVIALDKVNAAESVSDELVNALKQRLNAQYSEADYRGLI 606 Query: 306 KKLRSNAIIHY 316 + L++NA I Y Sbjct: 607 ESLKANAKIDY 617 >gi|300311558|ref|YP_003775650.1| peptidyl-prolyl cis-trans isomerase [Herbaspirillum seropedicae SmR1] gi|300074343|gb|ADJ63742.1| peptidyl-prolyl cis-trans isomerase protein [Herbaspirillum seropedicae SmR1] Length = 258 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 86/300 (28%), Gaps = 53/300 (17%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--ELEKIAV 77 ++++F I I ++ +NG+ I + + Q +L Sbjct: 8 LLVLLFAIASIPAFAQN------LAVVNGKAIPSSRAELMVKQMTAQGQPDSPQLRGAIK 61 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 +ELI + QE +K G+ ++ N Sbjct: 62 EELINREILMQEADKQGLANSTDVKNQL-------------------------------E 90 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 LA QSI + D++ K + +I A K K + + + Sbjct: 91 LARQSIVIRALIADYLKKNPVSDADIKAEYDKFKAQAGDKEYHARHILVDKKEDAEAIIA 150 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256 K K + ++ + G + + F + + + Sbjct: 151 KLKA----------GTKFEDLAKQSKDTGSAANGGDLDWATPASFVKPFSDAMVALKKGE 200 Query: 257 TTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T P TQ G I + D R + Q +K Y ++LR+ A + Sbjct: 201 VTPTPVQTQFGWHVIKLEDVRPAKV--PTLDEVKPQIAEALQQKKLQAYQEQLRAKAKVQ 258 >gi|167036601|ref|YP_001664179.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039253|ref|YP_001662238.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter sp. X514] gi|300913893|ref|ZP_07131210.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter sp. X561] gi|307725422|ref|YP_003905173.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter sp. X513] gi|320115028|ref|YP_004185187.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166853493|gb|ABY91902.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter sp. X514] gi|166855435|gb|ABY93843.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|300890578|gb|EFK85723.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter sp. X561] gi|307582483|gb|ADN55882.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter sp. X513] gi|319928119|gb|ADV78804.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 301 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 89/305 (29%), Gaps = 16/305 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-KINGELEK 74 + L++ + + S + + +NGE IT+ + K +K Q + + + K Sbjct: 1 MKRKIALLLSFVFIVFLTVSCSAEKDVVAVVNGENITNAEYKKVFDQVKAQIESSPQYTK 60 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 E ++++ + N ++ ++ KQ + Sbjct: 61 DIWDEDYQGKKFLDVVKENVLDSLIAEKLLVQEALKNNITVTDKEIEDEYQKQKEVNKDI 120 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + + + + +++ E E+ + + ++ Sbjct: 121 TKEDVKNYLLINKLFDEYTKDVKVTEEELKKYYEDNEEQFETVKASHILV---------- 170 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K +D ++ ++++ G + P+F ++ Sbjct: 171 --VDEKTAEDIYNRLMKGEDFATLAKEYSVDTATKDQGGDLGEFPHGVMVPEFDQVVFSL 228 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + P T G I D + +K + + K + E L A Sbjct: 229 KKGEISKPVKTDYGYHIIK-SDGVIIKPFDEVKDTIESYLLDDKKNQVIIEKYDALEKAA 287 Query: 313 IIHYY 317 I + Sbjct: 288 KIQKF 292 >gi|330446589|ref|ZP_08310241.1| PPIC-type PPIASE domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490780|dbj|GAA04738.1| PPIC-type PPIASE domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 630 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 40/406 (9%), Positives = 100/406 (24%), Gaps = 94/406 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ + + +++ F + SY + + +N + I+ + + Sbjct: 1 MMERLREGANSIWVKIILSLIILSFVFAGVGSYLASGNEQ-VAAKVNDKEISQREFEQAY 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + Q + K + ++ + L +Q + G+ V Sbjct: 60 QNQRNQMQQRLGDYFSTLMGNPEYVQQFRKSVLDRMVNDELIEQRATELGLGVSDAQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 ++ + E ++ L + GI F + + + + Sbjct: 120 AIIEMPAFQVDGVFNNEQYNLTLRRAGISPEQFAESIRKDMLRQQFLSALQSSDFALNNE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS-- 186 DF K + E A + KN R ++ Sbjct: 180 VDELRKLESQERVVRTLKLNLADFTNKVTVTDEEAKAYYDENKNQFTRPAQVKVSYIELS 239 Query: 187 -----------------IPDNKLQNQGFVQKRIKDAE-----------------ESRLRL 212 + +KR Sbjct: 240 GKNLVNNIKITDQEAETYYNEHKSKYSTAEKRQVSHILVKGDSDASKAKAEALLAELKGG 299 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK--SQNNTTNPYVTQKGVEY 269 + +K + GK + + + P F+ + + + G Sbjct: 300 ANFADVAKKSSDDTFSAKDGGKLDWFGKGVMDPAFEEAAFSLAKPGDMSGLVKSSFGYHI 359 Query: 270 IAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 I + + + +KA + A+ ++ + + KL A Sbjct: 360 ILLDGIEEPKVKPFAEVKASIIAELQEQQVAEQFYKLQSKLAETAF 405 >gi|220904185|ref|YP_002479497.1| SurA domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868484|gb|ACL48819.1| SurA domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 311 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 93/301 (30%), Gaps = 24/301 (7%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQKINGE---------LEKIAVQEL 80 A +++ +NG+VIT D+ K + + + + + + + Sbjct: 17 CGVQAAQLNKVAAVVNGQVITMFDLQKNALPDMARARLNPDNPADAKQVDAIFRKVLDMM 76 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I++ L QE + ++ ++ + + ++ + F L +Q + + Sbjct: 77 IMDILIAQEARRLKVSVSPADIDNEIAKLMQGRNMTKQQFEEQLARQKSSVAELRGNIEK 136 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + ++ + K EI A + K+ + + Sbjct: 137 SLLRQKIMSMEVGRKVVVTPEEIRAYYEAHKDTMYDRNGLHMGVMVYSPKVNAASIAA-- 194 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN 259 + R K++ + G + L+P+++ K + T Sbjct: 195 ------QIRSGALTFEEAARKYSIAPNKEKGGDMGPVEWDRLNPEWEGRLTKMKPGDVTE 248 Query: 260 PYVTQKGVEYIAICDKRDLGGE----IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + Q + + G + K + A K + +Y +LRS A+I Sbjct: 249 LFDLQGHKAQVHLFRPGGGGVKMLSLEEAKPQIDAILRQPKAMERFDDYTGQLRSKAVID 308 Query: 316 Y 316 Sbjct: 309 I 309 >gi|294675776|ref|YP_003576391.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter capsulatus SB 1003] gi|294474596|gb|ADE83984.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter capsulatus SB 1003] Length = 289 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 30/315 (9%), Positives = 81/315 (25%), Gaps = 54/315 (17%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS----SRIRTTINGEVITDGD---ISKRIA 61 + F ++L + V+ + + + + T++G IT G + + Sbjct: 1 MPIFTRVLGSVAVMALLAGPALAEEAAKGGKTPGPETVVATVDGTEITLGMMVSVRNSLP 60 Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 Q + L + +LI +T + E Sbjct: 61 AEYQQLPDQVLFNGVLDQLIQQTALAKVGE------------------------------ 90 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 D + + ++ +++ + + K REY Sbjct: 91 ---GMMTRRDEIALEVERRAYLAGMLLDYTAERAVTPDKLKAAYDTKFAKAEPSREYHAA 147 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 ++ + + + + + + G + + Sbjct: 148 HIIVASEAEAKAIKAEID-----------GGADFATVAKAKSQDGAAANGGDLGWFDLTA 196 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 + P F + + P T+ G I + + R G + + + ++ Sbjct: 197 MVPPFAEAVAAMKAGEIKGPVQTEYGWHVIKLMESR--LGAAPTLEEATEELSGDLRQQA 254 Query: 301 EAEYVKKLRSNAIIH 315 + V + A + Sbjct: 255 VQDRVTDTVAKAKVE 269 >gi|188532873|ref|YP_001906670.1| peptidyl-prolyl cis-trans isomerase SurA [Erwinia tasmaniensis Et1/99] gi|188027915|emb|CAO95772.1| Peptidyl-prolyl cis-trans isomerase, survival protein [Erwinia tasmaniensis Et1/99] Length = 431 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 33/311 (10%), Positives = 109/311 (35%), Gaps = 18/311 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGEL 72 +++ + ++ + + ++ +N V+ + D++ + +K Q + L Sbjct: 7 LILGAALTANTAFAAPQVVDKVAAVVNNGVVLESDVNSMMQSVKGQAQQAGQQLPDDKTL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ L+++ + Q+ +++G+ ++ A+ LS + S L G+ Sbjct: 67 RHQILERLVMDNILLQKAKQAGLQVSDAQLDQAIANIAQQNKLSIDQLRSRLAYDGMNYA 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +++ + + +V ++ + L E+ + ++M + + +P ++ Sbjct: 127 TYREQIRQEMATSEVRNSEVRRRVSILPQEVDSLAEQMASQNSAGTELNISHILLPLSEN 186 Query: 193 QNQGFV---QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 Q V +K + ++ + G + +L F Sbjct: 187 PTQQQVDDQEKLARQLTSEARSGADFAKLAIANSADAQALKGGNMGWGRLQELPSLFAQA 246 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + + P + G + + D R + ++ + +P + + Sbjct: 247 LVTAKKGDIIGPIRSGVGFHILKVNDMRGDNQSISVTEVHARHILLKPSPIMTDDQARQK 306 Query: 305 VKKLRSNAIIH 315 ++++ A I Sbjct: 307 LQQV--AAEIK 315 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 58/168 (34%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + ++I+V E R +L +Q QK + A E + Sbjct: 259 IRSGVGFHILKVNDMRGDNQSISVTEVHARHILLKPSPIMTDDQA-RQKLQQVAAEIKSG 317 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEY 269 + ++ + G + P F++ L + + ++P + G Sbjct: 318 KLTFSDAAKQLSQDPGSANQGGDLGWSSAEVFDPAFRDALLRLKKGQISDPVHSSFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R+ A + Sbjct: 378 IELMDTRKVDKTDAAKKERAYRLLFNRKFAEEAQTWMQEERAAAYVKI 425 >gi|256751661|ref|ZP_05492536.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter ethanolicus CCSD1] gi|256749470|gb|EEU62499.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter ethanolicus CCSD1] Length = 301 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 88/305 (28%), Gaps = 16/305 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-KINGELEK 74 + L++ + + S + + +NGE IT+ + K +K Q + + + K Sbjct: 1 MKRKIALLLSFVFIVFLTVSCSAEKDVVAVVNGENITNAEYKKVFDQVKAQIESSPQYTK 60 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 E ++++ + N ++ ++ KQ Sbjct: 61 DIWDEDYQGKKFLDVVKENVLDSLIAEKLLVQEALKNNITVTDKEIEDEYQKQKEVSKDI 120 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + + + + +++ E E+ + K ++ Sbjct: 121 TKEDVKNYLLINKLFDEYTKDVKVTEEELKKYYEDNKEQFETVKASHILV---------- 170 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K +D ++ ++++ G + P+F ++ Sbjct: 171 --VDEKTAEDIYNRLMKGEDFATLAKEYSVDTATKDQGGDLGEFPHGVMVPEFDQVVFSL 228 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + P T G I D + +K + + K + E L A Sbjct: 229 KKGEISKPVKTDYGYHIIK-SDGVIIKPFDEVKDTIESYLLDDKKNQVIIEKYDALEKAA 287 Query: 313 IIHYY 317 I + Sbjct: 288 KIQKF 292 >gi|119383650|ref|YP_914706.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paracoccus denitrificans PD1222] gi|119373417|gb|ABL69010.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paracoccus denitrificans PD1222] Length = 423 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 37/264 (14%), Positives = 90/264 (34%), Gaps = 4/264 (1%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 +N V+T ++ +R+ L++ + A Q LI + L+ + GI ++ Sbjct: 35 VNDSVVTRYELDQRMRFLQILRAPDGDRASAEQALIDDRLRLFAARQMGIAASDAQIDAG 94 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + A + E+F+ L + G+ F+ ++A +W ++V+ + + + E+ Sbjct: 95 LAEFAGRANMDVEEFTRALAQAGVEQQTFRDFIAAGVVWRELVRQRLVPQVQVSDAELDQ 154 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 Q++ ++ + L + Q +S + ++ Sbjct: 155 EMQRVIETPRITHVALSELIIPAPPGQEAQAMRLAES--LVQSVRSEADFAAAARQHSAT 212 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 + G+ + +L P + ++ + P + V + D R Sbjct: 213 PSAENGGRLPWAPLENLPPSLRPIILSMQNGQISQPLTVEGAVVLFYLRDSRGTLRPG-A 271 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKL 308 K + EA + L Sbjct: 272 KEQVLDYVRFRLASTAEANRIAAL 295 Score = 40.0 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 30/102 (29%), Gaps = 24/102 (23%) Query: 237 LLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR-------------------- 276 L + + L +N + E + +C ++ Sbjct: 319 LSQGQIPTAEAIRLAVLDDNESTIVSQGGSAEILMLCKRQSALLAGNAQEAPVPVTAEGE 378 Query: 277 ----DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + + Q K+ + Y+ +LR+NAII Sbjct: 379 EGAAPDPDALPDREQMRGQIFSRKVGQAADNYLAELRANAII 420 >gi|254517383|ref|ZP_05129440.1| chaperone SurA [gamma proteobacterium NOR5-3] gi|219674221|gb|EED30590.1| chaperone SurA [gamma proteobacterium NOR5-3] Length = 412 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 91/276 (32%), Gaps = 15/276 (5%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 T+N L + + LI+E ++ Q + G+ + Sbjct: 35 LATVN---------ENIALQGGEAPPEDVLIRETLDRLILENIQIQMGARFGVRISDAQL 85 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + + A GL+ E F+ L+++G +Q + + I V + + E E Sbjct: 86 DQAMARIAGQNGLTPEQFAMLLEQEGRSYGEIRQNIEREMIIQRVQQGNVNQLIQISEQE 145 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + + + R + +P ++ V + E R+ Sbjct: 146 IENYLSTEEGQKLVQPEYRIIHALLPITSDTSETEVAQSTAYCETLVERIRSGEPFDAVM 205 Query: 223 ASKIHDV--SIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR--- 276 AS S G + DL FQ + + T + + + G+ + + D+R Sbjct: 206 ASVPPQYVFSGGDLGWRKLDDLPSLFQEVAPTLGRGETADLFQSPSGLHIVTMADQRGGG 265 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 D+ ++ + + ++ +L++ A Sbjct: 266 DMTINQTKVRHILIEPSEILTDEQARALAVELKARA 301 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 49/141 (34%), Gaps = 3/141 (2%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 + I +++ + + + + +++ I G + Sbjct: 271 QTKVRHILIEPSEILTDEQARALAVELKARAEAGEDFGDLAREYSEDIGSAAEGGDLGWT 330 Query: 238 LESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPT 295 + P+F+N + N + P +Q G + + D+R+ + KA + Sbjct: 331 SPGQMVPEFENTMASTEINTISAPVRSQFGWHILEVLDRREKDVTEDMRKAQVREFLHGR 390 Query: 296 KIEKHEAEYVKKLRSNAIIHY 316 K ++ +++K+R A + Sbjct: 391 KYQEELDAWLRKIRDEAFVDI 411 >gi|300930256|ref|ZP_07145669.1| PPIC-type PPIASE domain protein [Escherichia coli MS 187-1] gi|300461828|gb|EFK25321.1| PPIC-type PPIASE domain protein [Escherichia coli MS 187-1] Length = 623 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|320539610|ref|ZP_08039274.1| putative peptidyl-prolyl cis-trans isomerase (PPIase) [Serratia symbiotica str. Tucson] gi|320030222|gb|EFW12237.1| putative peptidyl-prolyl cis-trans isomerase (PPIase) [Serratia symbiotica str. Tucson] Length = 435 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 37/321 (11%), Positives = 109/321 (33%), Gaps = 18/321 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + + +K T + ++ C ++ + ++ +N V+ + DI+ + +KL Sbjct: 1 MGNVMKNWRTLILGLVVCANA--AFAAPQEVDKVAAVVNNGVVLESDINGLLQSVKLHAQ 58 Query: 69 NGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 L ++ LI++ ++ Q +K GIT + ++ A +S Sbjct: 59 QDGQPLPDDNLLRHQIIERLIMDNIQLQMAQKMGITVSNADLDNSIANIAAQNKMSLNQL 118 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + L +G+ N ++ + + + +V N + L E+ A +++ V + + Sbjct: 119 RNRLSYEGLNYNTYRLQIRKEMLIAEVRNNAVRRRVTILPQEVEALAKQVGAQNVSDTEM 178 Query: 181 RTVLFSIPDNKLQNQGF---VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 +P + +Q + + +++ + G + Sbjct: 179 NISHILLPLPENPSQQQMDSAEALARKLMGELHNGADFGKLAITYSADPQALKGGNMGWG 238 Query: 238 LESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQN 292 ++ F ++L+ + P + G + + D R + ++ + Sbjct: 239 KLQEIPTLFAEHLVNAKKGIIVGPIRSGVGFHILKVNDIRGASQSVSVTEVHARHILLKP 298 Query: 293 TPTKIEKHEAEYVKKLRSNAI 313 + + + + + Sbjct: 299 SVVMTDDQARTKLASIAQDIK 319 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 33/280 (11%), Positives = 83/280 (29%), Gaps = 20/280 (7%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I ++ + Q ++ I+ L E + + + Sbjct: 156 ILPQEVEALAKQVGAQNVSDTEMNISHILL-----PLPENPSQQQMDSAEALARKLMGEL 210 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ----SIWPDVVKND-------FMLKYGNL 159 N + ++ + +Q +V G Sbjct: 211 HNGADFGKLAITYSADPQALKGGNMGWGKLQEIPTLFAEHLVNAKKGIIVGPIRSGVGFH 270 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 +++ + ++++V E R +L +Q K A++ + K ++ Sbjct: 271 ILKVNDIRGASQSVSVTEVHARHILLKPSVVMTDDQART-KLASIAQDIKSGRTKFADEA 329 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + + G + P F++ L K ++ + P + G I + D R Sbjct: 330 KHLSQDPGSALQGGDLGWASPDIYDPAFRDALLKLNKGEISAPVHSAFGWHLIQLLDTRQ 389 Query: 278 L-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + A K K + ++++LR+ A + Sbjct: 390 VDKTDAAQKNRAYRMLFNRKFAEEAQTWMQELRAQAYVKI 429 >gi|260576764|ref|ZP_05844749.1| SurA domain protein [Rhodobacter sp. SW2] gi|259021016|gb|EEW24327.1| SurA domain protein [Rhodobacter sp. SW2] Length = 402 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 99/273 (36%), Gaps = 6/273 (2%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIR--TTINGEVITDGDISKRIALLKLQKINGEL 72 ++ V+ +F + + + A +N VI+ ++ +RI+ + + + + Sbjct: 1 MMRIKTVIFVFLLGLTGAIPAAAQDGPFAPRVYVNDRVISQYELDQRISFMTVLGLRENV 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 E++A+ LI E L+ ++ + V + A LS E+F + L G+ Sbjct: 61 EEVALNALIDERLQMTVAKQYNVKLTPKQVEAGMAEFAGRAQLSTEEFLTALAPAGVEAQ 120 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 F+ ++ IW ++V+ F + E EI ++ T + L ++ P+ +L Sbjct: 121 GFRDFVTAGLIWREIVRAKFGPRASISEAEIDQAIAQIDKNTSVQILASEIVIPAPEGQL 180 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 +R + + +S G+ + +L P +L Sbjct: 181 PVALATARR---LKAQSRTPEDFAKAARENSSSSSAGRGGRLNWTPVGNLPPDVVPVLLA 237 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 + P + V + + + + + Sbjct: 238 LKPGQVSAPVKLEGSVALFLLHEIKAQEQDGPV 270 Score = 42.0 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 27/62 (43%) Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 ++ V ++ +C++ + + + AQ ++ + A Y+ LR+NA Sbjct: 338 DPGESSTALVRGGNRVFLMLCNRIPVLDVPPSREAVRAQLLNQRLAAYGAGYLADLRANA 397 Query: 313 II 314 II Sbjct: 398 II 399 >gi|78061944|ref|YP_371852.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. 383] gi|77969829|gb|ABB11208.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. 383] Length = 296 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 92/305 (30%), Gaps = 28/305 (9%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-ELE 73 + + I+ + + + + + +T DI+ + + + + Sbjct: 2 MTKMKMLAIVAGSLALGTPFAAHAQDDVIANAAQASVTQDDIAGLLKAVSPEGRERLAAD 61 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 A+ +++ TL + A++ G + +Q D Sbjct: 62 PAALDQVVRSTL----------------AQKAVLAEAKSKGWDKQAQVQAAVEQARRDIV 105 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + YLA V + E++ +K + R + + ++P N Sbjct: 106 VRSYLAS-------VNAPPADYPSDTELQSAYDKNRAAFTAPRALHVAQIYIAVPPNADA 158 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK 252 ++ SR R + + + G ++ + + P + Sbjct: 159 ATLDKARKQAADLASRARSGDFAALAKANSQDKASAANGGDLGFVPDQLMVPAVRQAADA 218 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + P T G + + D R +K L A + +++ Y+ KL Sbjct: 219 LKPGQVSAPIQTPAGFHVVKLIDVRAAAPRPLADVKEQLRAMLRAQRTQQNAQAYLAKLA 278 Query: 310 SNAII 314 +NA I Sbjct: 279 ANAPI 283 >gi|268316845|ref|YP_003290564.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus DSM 4252] gi|262334379|gb|ACY48176.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus DSM 4252] Length = 458 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 29/286 (10%), Positives = 81/286 (28%), Gaps = 17/286 (5%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKI---NGELEKIAVQELIVETLK-KQEIEKSGI 95 I + E+I ++ +A Q+ + EL A+ +LI + + + + I Sbjct: 28 DEIVAVVGNELILRSEVDAFLAGYLQQQRIPYSDELWLEALNQLIDQKVLAEHARRDTTI 87 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------ 149 + V + + + G K L + + Sbjct: 88 QISDDRVEQALQERLNQLMQQVGGQTRLEEIYGKTLTQLKAELREDFREQMLAETFRNRK 147 Query: 150 -NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + + ++ ++ Q + + Sbjct: 148 LQQIRITPSEVRAWFEQFPTDSLPTLPDLVRLSHIVRYPRPSEKARQEAFEIASAIRDSI 207 Query: 209 RLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKG 266 + +F+ + G +DL P+F + + P+ T G Sbjct: 208 VSGRSSFEDMARRFSEDPGSAAAGGHIPDTRLADLVPEFAAVAARIPIGEISQPFETPFG 267 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIE-KHEAEYVKKLRSN 311 V + + + G++ ++ + ++ + Y++ +R + Sbjct: 268 VHILRVNRR---QGDLIDFNHILIRIDESQADPSEAIAYLEAVRDS 310 >gi|168187039|ref|ZP_02621674.1| foldase protein PrsA [Clostridium botulinum C str. Eklund] gi|169295091|gb|EDS77224.1| foldase protein PrsA [Clostridium botulinum C str. Eklund] Length = 348 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 38/343 (11%), Positives = 104/343 (30%), Gaps = 31/343 (9%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI--------- 56 ++ + + + ++ A++ + + + IT G++ Sbjct: 1 MKNIRKLVAAVAMCVFSVSAVGCSMIEKTPEAINKTVVAKVGDKKITKGELDSNFGVKRY 60 Query: 57 ---------SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-- 105 ++++ +++ VQ++ + KQE EK + + + Sbjct: 61 AEQFKAQYGDNYAENPQVKEQLKQVKLAVVQQMAAQEALKQEAEKLKLVPKEDELKKEAD 120 Query: 106 --FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + + + + + K + L ++ + ++N+ E E+ Sbjct: 121 KKIQEIKKEQNIKTDQDFDKMVKASGFTKEGFENLVKDNVILEKLQNELTKNVKVDEKEM 180 Query: 164 PANKQKMKNITVREYLI----RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + K+ ++ + ++ V+ IK +E + Sbjct: 181 QKYYETHKDKYPKDPKNPTKVHLAHIILQPKSQEDVSKVESEIKSIKEELNKGADFSILA 240 Query: 220 EKFASKIHDVSIGKAQYLL---ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK- 275 +K++ G + + L ++P TQ G I + K Sbjct: 241 KKYSQDGSKDKGGDLGTVPVVNSGFDEQFMDSALPLKDGQISDPVKTQFGYHIIKMIKKD 300 Query: 276 -RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + +K ++ K +K K+++ NA I Y Sbjct: 301 VKPCKTFAEVKNEINKFLLQDKKDKAIKNKFKQIQDNAKIKVY 343 >gi|194437396|ref|ZP_03069493.1| peptidylprolyl isomerase [Escherichia coli 101-1] gi|253774568|ref|YP_003037399.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160511|ref|YP_003043619.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli B str. REL606] gi|194423565|gb|EDX39555.1| peptidylprolyl isomerase [Escherichia coli 101-1] gi|242376223|emb|CAQ30914.1| periplasmic folding helper protein [Escherichia coli BL21(DE3)] gi|253325612|gb|ACT30214.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972412|gb|ACT38083.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli B str. REL606] gi|253976622|gb|ACT42292.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli BL21(DE3)] gi|323972295|gb|EGB67505.1| ppic-type ppiase domain-containing protein [Escherichia coli TA007] Length = 623 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|260768943|ref|ZP_05877877.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio furnissii CIP 102972] gi|260616973|gb|EEX42158.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio furnissii CIP 102972] Length = 619 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 37/403 (9%), Positives = 103/403 (25%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y + S+ + G I G+ + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYL-ISGSNNAAAKVGGTEIGRGEFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + K + +I + L Q + G+ + Sbjct: 60 QNERNRMQSQLGDYFSNLLADPEYVASFRKSVLDRMINDLLLDQHAQALGLRVSDTQIRQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + + E + S L + G + F +Y+ + ++ Sbjct: 120 MILDMPQFQTDGKFDQEIYQSALRRAGFSPDSFAEYMRRDLVRNQLLSALQGSEFTLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +F + EI ++ R ++ + Sbjct: 180 VEAQGELITQTRDIRTITLSPAEFAKSIELSDDEIEQYYKQNSERYTRPEQVKLSYIELS 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 +L+N + +K + + Sbjct: 240 AEQLKNAITISDEQAKQYYESHMDKYSSAEQRQVSHILIQGDDEKAAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + I G ++ + P F++ K + + + G I + Sbjct: 300 ATLAKEKSQDIGSAEEGGSLGWIEHDTMDPAFESAAFALKKAGDVSGLVKSDFGYHIIKL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 D + + A + ++ + E +L A Sbjct: 360 DDVKAPVAKPYAEVAADIKSELKDQQAIDKFYELQTELEKVAF 402 >gi|182420001|ref|ZP_02951235.1| foldase protein PrsA [Clostridium butyricum 5521] gi|237669545|ref|ZP_04529525.1| prsA family protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376038|gb|EDT73625.1| foldase protein PrsA [Clostridium butyricum 5521] gi|237654989|gb|EEP52549.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 343 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 35/340 (10%), Positives = 97/340 (28%), Gaps = 29/340 (8%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 + I ++ + + I ++ A+ + T+ E IT D+ + + Sbjct: 1 MKRIKKLIAAVSIFTLSISVMGCKMIEKTPEAIQKTVYATVGDEKITKADMDEEMKATID 60 Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDS-------------------NTVNYFF 106 Q + A E I + LK+ +++ + N Sbjct: 61 QLKQQYGDDYANNEKIKDQLKQMKVQYLNAMVNEKLMLKNAESVGVTPTDDELNEYADKQ 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 ++ + L+ G ++ +K Y Q V+ + + A Sbjct: 121 IEQLKQAYPDDAQLQQVLEANGFTEDSYKDYAKKQYKLQK-VQEAITADVEVTDDDAKAY 179 Query: 167 KQKMKNITVRE----YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + K+ ++ + + + + + ++ Sbjct: 180 YDENKDSQYTVGAGANAAHILIAEKGSDGNIDFDASLAKANEVKAKLDAGADFAQLASEY 239 Query: 223 ASKIHDVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD-- 277 + G ++ + + + S+ ++P +Q G I +D Sbjct: 240 GTDGTKDKGGDLGFVAYNQANYDQDFLAGFKQLSEGQISDPIKSQFGYHIIKATGIKDEV 299 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + +K + +Q + K + + + + A + Y Sbjct: 300 VTPFDDVKEQIKSQLLQQQQSKAFNDKISEWKDAAKVKTY 339 >gi|332094597|gb|EGI99643.1| PPIC-type PPIASE domain protein [Shigella boydii 5216-82] Length = 623 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TGELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|146310569|ref|YP_001175643.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Enterobacter sp. 638] gi|145317445|gb|ABP59592.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterobacter sp. 638] Length = 624 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 42/396 (10%), Positives = 106/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S+ +NG+ I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIILSFILTGVSGYLIGGSSNY-AAEVNGQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 A + + L + V LI E L Q ++ G+ + V Sbjct: 60 AGERNRMQQQLGDQFSELAANEGYMKTLRQQTVNRLIDEALLDQYAKRLGLGISDDQVKK 119 Query: 105 FFVQHAR---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF--------- 152 N +++ +++ G+ + + Q L Q ++ Sbjct: 120 AIFSTQAFQTNGKFDNTRYNAIVNQMGMTADQYAQALRNQLTSQQLINAVVGTDFMLKGE 179 Query: 153 ------------------------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K + E+ A ++ KN R + Sbjct: 180 TDELAALVSQQRVVRAATIDVNALAAKQQASDEEVKAYYEQNKNNFTAPEQFRVSYIKLD 239 Query: 189 DNKLQNQG-----------------------------FVQKRIKDAEESRLRLPKDCNKL 219 + + K + + Sbjct: 240 AATMPETASDSDIQSYYDQHQDQFTQAQRNRYSVIQTKTEADAKAVVDELAKGADFATVA 299 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 + ++ I + G +L ++ + +N K + + + G + + D + Sbjct: 300 KAKSTDIISAKNGGDMGWLEDATTPEELKNAGLKEKGQLSGVIKSSVGFLVVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KTKPLAEVRDDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|114327287|ref|YP_744444.1| peptidyl-prolyl cis-trans isomerase [Granulibacter bethesdensis CGDNIH1] gi|114315461|gb|ABI61521.1| peptidyl-prolyl cis-trans isomerase [Granulibacter bethesdensis CGDNIH1] Length = 346 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 35/283 (12%), Positives = 75/283 (26%), Gaps = 48/283 (16%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQK---INGELEKIAVQELIVETLKKQEIEKSGIT 96 S + +NG I GD+ L Q + I + +++ Q K G+ Sbjct: 86 STVVGRVNGADIHLGDLEDAARNLPEQMRQAPPQVIYPILLNQMLQREALVQAARKEGLD 145 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 + + A Q++ D ++ Sbjct: 146 KKPDVAAD------------------------------MKRAANQTLQNDYIREHVGPLL 175 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + + +K+ E R +L D + ++ Sbjct: 176 TDEALRKKFDKELAGKPGEEEVHARHILVPTEDEAKRIIAELKA-----------GGDFA 224 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICD 274 ++ + + G + ++D+ P+F + N + P TQ G I + Sbjct: 225 KIAKERSKDPGAANGGDLGFFKQADMVPEFSKAAFALKNNEVSPTPVHTQFGWHVIQTLE 284 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 R + Q I+ + V A + + Sbjct: 285 HRRAPAQT--FEQARDQLRQQVIQDGVKDLVTNAMKGAKVERF 325 >gi|187734800|ref|YP_001876912.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Akkermansia muciniphila ATCC BAA-835] gi|187424852|gb|ACD04131.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Akkermansia muciniphila ATCC BAA-835] Length = 384 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 96/301 (31%), Gaps = 23/301 (7%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ-------------KINGELEKIAVQELIVETLK 86 +RI T+NG IT ++S R+ + Q K +K +++L+ L Sbjct: 83 NRIAATVNGRPITANEVSVRLMPIGAQLAAQYPKQGPEFYKQLALAKKNIIEDLVERELL 142 Query: 87 KQEIEKSGITFDSNTVNYFFVQHA-RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + E E G + ++ + F L G+ F++ Q Sbjct: 143 RNEFEGMGGVIRDSLIDQEVNRTILTTFNGDRSAFLKNLSLSGMTIRAFREMTKKQLQVQ 202 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + + EI + K ++ + D+ + + Sbjct: 203 IMRASKYDQEIPPTPEEIQQEYESTKEQYRDLTKDKIKFKKIFIPMLGDDSASTPEVQLN 262 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ-FQNLLKKSQNNTT 258 A+E + + ++++ ++ G S L P+ + Sbjct: 263 LAELIAKEIKSKNATFEEMAKRYSKDLYAEKGGDWPVTERSTLSPESAAIIFGAQPGEII 322 Query: 259 NPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P V G + + K A+K + + + ++V++LR AI+ Sbjct: 323 GPLVDSTGFTIVLVEKKELAPPPPLSAIKEQIDIMARNKRSNERYKKWVERLRKKAIVKI 382 Query: 317 Y 317 Y Sbjct: 383 Y 383 >gi|223039645|ref|ZP_03609931.1| foldase protein PrsA [Campylobacter rectus RM3267] gi|222879028|gb|EEF14123.1| foldase protein PrsA [Campylobacter rectus RM3267] Length = 270 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 88/299 (29%), Gaps = 40/299 (13%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQKINGELEKIAVQELI 81 F + + ++++ + T+NG ITD DI+ +A + L+++ + +K + E I Sbjct: 4 FLFATLSLAAAMSLNAAVHATVNGSDITDKDIAFTLAAMPGVTLEQLPKDTQKKVIDETI 63 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 L E +KSG+ Sbjct: 64 SRKLLLDEAKKSGLEKTDEYKAAL-------------------------------EEVKD 92 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 +I D+ E EI K K ++ + K N + Sbjct: 93 NIALDLWMKRIFDNVKVSENEISDFYNKNKAEFAVPAQVKAKHILVAAEKDANDVIAALK 152 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-N 259 + + + K + + G+ + +S + F + + T Sbjct: 153 GLKGDALVKKFEELAK--AKSTDQGSAENGGELGWFGQSQMVKPFADAAFALKKGEITAK 210 Query: 260 PYVTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P + G I D + G +K + K + +LR+ A + Y Sbjct: 211 PVKSNFGYHVILKEDSKAAGTVGLNEVKPQIEGNLKMEKFRNDIRKRGDELRAKAKVEY 269 >gi|209517935|ref|ZP_03266768.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. H160] gi|209501651|gb|EEA01674.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. H160] Length = 265 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 76/296 (25%), Gaps = 36/296 (12%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELI 81 + + + + + T+NG+ ++ D I Q + +L ELI Sbjct: 2 FALALGTALSLASSATEKPFVTVNGKPVSQADADLYIGQAHAQGFSDSPQLTNHVRDELI 61 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + Q+ EK G + + + + Sbjct: 62 RREVLFQQAEKVGFDRNPEVAARAEAARQKILVQAQATWEIE------------------ 103 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 I +++ + + + EY +R +L Sbjct: 104 -IVRAYMQDFLKKNPVSDDQLKAMYNEMKSKGGSTEYKVRHILVKDEGEAK--------- 153 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN- 259 D + + ++ + G + S + F + + T Sbjct: 154 --DIIARLNKGASFGDLAKESIDSDSRYNGGDLGWKTSSKVVKPFADAVSHLHKGEYTQT 211 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 P T G I + D R L + E+ VK LR+ A I Sbjct: 212 PVKTGYGFHVIEVDDTRALQV--PSFEEMKPMLYQQAQEELVDRMVKNLRAKATIQ 265 >gi|300903291|ref|ZP_07121219.1| PPIC-type PPIASE domain protein [Escherichia coli MS 84-1] gi|301301592|ref|ZP_07207727.1| PPIC-type PPIASE domain protein [Escherichia coli MS 124-1] gi|300404586|gb|EFJ88124.1| PPIC-type PPIASE domain protein [Escherichia coli MS 84-1] gi|300843089|gb|EFK70849.1| PPIC-type PPIASE domain protein [Escherichia coli MS 124-1] gi|315256269|gb|EFU36237.1| PPIC-type PPIASE domain protein [Escherichia coli MS 85-1] Length = 623 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|260428595|ref|ZP_05782574.1| ppic-type ppiase domain protein [Citreicella sp. SE45] gi|260423087|gb|EEX16338.1| ppic-type ppiase domain protein [Citreicella sp. SE45] Length = 410 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 95/248 (38%), Gaps = 5/248 (2%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++ VIT ++ +R +L L G +A ++L+ + L+ Q + +GI + Sbjct: 36 AIIVDEMVITGYELDQRARMLTLLNAPGNTNDLAREQLVDDRLRLQAAQNAGIEPTEEEI 95 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + A LS E+F + L + G+ + F+ ++ + W +V++ F+ + E Sbjct: 96 LDGMSEFAGRAQLSREEFVTALGRAGVAEQTFRDFVRAGAAWRSLVQSRFVQQSQVSPAE 155 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + L+ ++ + ++ +R + + ++ Sbjct: 156 VDRALAGNGGSSTVRVLLSEIIMPLSPQNVEEVRARAER----IAQMTSESEFSAQARQY 211 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 ++ + G+ + ++L PQ + ++ S T P Q V + D + G Sbjct: 212 SATATRDAGGRLPWRELNELPPQLRPMILGLSPGQVTQPIPIQGAVALFQLRDIEETGYT 271 Query: 282 IALKAYLS 289 A + Sbjct: 272 APEIAAVE 279 Score = 46.2 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 3/81 (3%) Query: 237 LLESDLHPQFQNL-LKKSQNNTTNPYVTQKG--VEYIAICDKRDLGGEIALKAYLSAQNT 293 L S L K + + G + ++ +C + E A + + Sbjct: 327 LPPSQLPTDIAYELSKLDEGEVSTALTRSNGQSLMFLMLCGRTAAVSEDADRQQVEMGLR 386 Query: 294 PTKIEKHEAEYVKKLRSNAII 314 +I Y+ +LR+NA I Sbjct: 387 NQRISAMADGYLAQLRANARI 407 >gi|302039583|ref|YP_003799905.1| putative peptidylprolyl isomerase, PpiC-type [Candidatus Nitrospira defluvii] gi|300607647|emb|CBK43980.1| putative Peptidylprolyl isomerase, PpiC-type [Candidatus Nitrospira defluvii] Length = 304 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 88/314 (28%), Gaps = 48/314 (15%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR----IALLK 64 +S + LT+ L + + + ING IT + R + Sbjct: 15 ISSWQTRLTSA-ALGFCALGSLAGCTEPPQEEPVIAMINGRSITQSEFDIRWEDLSQATR 73 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + ++ + ELI+ L QE K G+ Sbjct: 74 ARYEKEGGKRRFLDELIMRELLMQEARKQGLDQSDEIREKTL------------------ 115 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 Q I +++K+ K + E+ A K N + ++ + Sbjct: 116 ------------RYREQLILDELLKDRIKTKVEVSKEELDAYLGKHANQLLANPKVQVSI 163 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLH 243 +P+ Q +++ G + L Sbjct: 164 MLLPNVYAAKDLKRQ---------VEAGGNFTRFALRYSIDERSRAKGGDLGPYKKGLLE 214 Query: 244 PQFQNLLKK-SQNNTTNPYVTQKGVEYIAI--CDKRDLGGEIALKAYLSAQNTPTKIEKH 300 P+ L+ ++P T +G + + + L + A + L + K K Sbjct: 215 PEVDALIPSLHPGVISDPIKTAQGYYLVKVSPLEPEILQADQATRERLRQELLAEKRRKR 274 Query: 301 EAEYVKKLRSNAII 314 + +LR+ A I Sbjct: 275 LDDVFAELRTGATI 288 >gi|187732708|ref|YP_001879152.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Shigella boydii CDC 3083-94] gi|187429700|gb|ACD08974.1| peptidylprolyl isomerase [Shigella boydii CDC 3083-94] Length = 623 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 103/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIHPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|283834240|ref|ZP_06353981.1| peptidylprolyl cis-trans isomerase D [Citrobacter youngae ATCC 29220] gi|291069758|gb|EFE07867.1| peptidylprolyl cis-trans isomerase D [Citrobacter youngae ATCC 29220] Length = 624 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 39/396 (9%), Positives = 101/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y + +NG+ I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGKNY-AAKVNGQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYSRELKLNISDDQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 +++ +++ G+ + + Q L Q ++ Sbjct: 120 AIFTTPSFQVDGKFDNNRYNAIVNQMGMTADQYAQALRNQLTTQQLINSVAGTDFMLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K + E+ + ++ KN + R + Sbjct: 180 TDELAALVAQQRIVREATIDVNALAAKQSVTDQEVTSYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AAAMQETASDADIQSYYDQHQDQFTQPQRNRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I G +L ES + +N K + + + G + D + Sbjct: 300 KEKSADIISARKGGDMGWLEESTTPDELKNAGLKEKGQLSGVIKSSVGFLVARLDDVQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + ++A+ K +K+ A Sbjct: 360 QVKPLSEARDDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|144900459|emb|CAM77323.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Magnetospirillum gryphiswaldense MSR-1] Length = 273 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 35/281 (12%), Positives = 72/281 (25%), Gaps = 50/281 (17%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 + + +NG I D++ L Q + ++ L ++ +K G+ D Sbjct: 30 NPVVAEVNGTKILQSDLANYQRSLPPQLAAQAPFEALQDMVVNNMLVAEQAKKEGLDKDP 89 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 L Q + + + Sbjct: 90 EVK----------------------------------QLYQQVLVKMWMNKHLKAEITPA 115 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 ++ + E R +L D ++K Sbjct: 116 AVKAAYDGYLASAKPEEEVRARHILTETEDQAKAVIAELKK-----------GADFTETA 164 Query: 220 EKFASKIHD-VSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAICDKR 276 + + + G Y + ++ PQF + + + P +Q G I + D+R Sbjct: 165 KAKSKDPSAKQNGGDLGYFAQGEMVPQFSSAAFAMKVGDLSEAPVQSQFGWHVIKVEDRR 224 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + EK + V +RS A + Y Sbjct: 225 QATP--PTLEQATPAIREELAEKLAQKLVGDVRSKAKVTLY 263 >gi|16128426|ref|NP_414975.1| periplasmic folding chaperone, has an inactive PPIase domain [Escherichia coli str. K-12 substr. MG1655] gi|26246452|ref|NP_752491.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli CFT073] gi|74311016|ref|YP_309435.1| peptidyl-prolyl cis-trans isomerase [Shigella sonnei Ss046] gi|82542929|ref|YP_406876.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Shigella boydii Sb227] gi|89107311|ref|AP_001091.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli str. K-12 substr. W3110] gi|91209515|ref|YP_539501.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli UTI89] gi|110640702|ref|YP_668430.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli 536] gi|117622701|ref|YP_851614.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli APEC O1] gi|170021186|ref|YP_001726140.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli ATCC 8739] gi|170080027|ref|YP_001729347.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli str. K-12 substr. DH10B] gi|188496348|ref|ZP_03003618.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli 53638] gi|191173673|ref|ZP_03035197.1| peptidylprolyl isomerase [Escherichia coli F11] gi|193067528|ref|ZP_03048495.1| peptidylprolyl isomerase [Escherichia coli E110019] gi|218557351|ref|YP_002390264.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli S88] gi|218688305|ref|YP_002396517.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli ED1a] gi|218703725|ref|YP_002411244.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli UMN026] gi|227884548|ref|ZP_04002353.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli 83972] gi|237707564|ref|ZP_04538045.1| peptidyl-prolyl cis-trans isomerase [Escherichia sp. 3_2_53FAA] gi|238899729|ref|YP_002925525.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli BW2952] gi|256023940|ref|ZP_05437805.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia sp. 4_1_40B] gi|293403562|ref|ZP_06647653.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli FVEC1412] gi|293408591|ref|ZP_06652430.1| conserved hypothetical protein [Escherichia coli B354] gi|298379174|ref|ZP_06989055.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli FVEC1302] gi|300900512|ref|ZP_07118679.1| PPIC-type PPIASE domain protein [Escherichia coli MS 198-1] gi|300918176|ref|ZP_07134783.1| PPIC-type PPIASE domain protein [Escherichia coli MS 115-1] gi|300947906|ref|ZP_07162054.1| PPIC-type PPIASE domain protein [Escherichia coli MS 116-1] gi|300958009|ref|ZP_07170173.1| PPIC-type PPIASE domain protein [Escherichia coli MS 175-1] gi|300988004|ref|ZP_07178484.1| PPIC-type PPIASE domain protein [Escherichia coli MS 45-1] gi|301025663|ref|ZP_07189181.1| PPIC-type PPIASE domain protein [Escherichia coli MS 196-1] gi|301330692|ref|ZP_07223294.1| PPIC-type PPIASE domain protein [Escherichia coli MS 78-1] gi|301647367|ref|ZP_07247179.1| PPIC-type PPIASE domain protein [Escherichia coli MS 146-1] gi|306813091|ref|ZP_07447284.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli NC101] gi|307137086|ref|ZP_07496442.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli H736] gi|307312181|ref|ZP_07591817.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli W] gi|309794826|ref|ZP_07689247.1| PPIC-type PPIASE domain protein [Escherichia coli MS 145-7] gi|312964534|ref|ZP_07778790.1| PPIC-type PPIASE domain protein [Escherichia coli 2362-75] gi|331640961|ref|ZP_08342096.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Escherichia coli H736] gi|331651379|ref|ZP_08352404.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Escherichia coli M718] gi|331656498|ref|ZP_08357460.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Escherichia coli TA206] gi|331661822|ref|ZP_08362745.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Escherichia coli TA143] gi|331681836|ref|ZP_08382469.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Escherichia coli H299] gi|83288412|sp|P0ADY2|PPID_ECOL6 RecName: Full=Peptidyl-prolyl cis-trans isomerase D; Short=PPIase D; AltName: Full=Rotamase D gi|83288413|sp|P0ADY1|PPID_ECOLI RecName: Full=Peptidyl-prolyl cis-trans isomerase D; Short=PPIase D; AltName: Full=Rotamase D gi|26106850|gb|AAN79035.1|AE016756_218 Peptidyl-prolyl cis-trans isomerase D [Escherichia coli CFT073] gi|1580712|dbj|BAA11645.1| YbaU [Escherichia coli W3110] gi|1773125|gb|AAB40197.1| similar to H. influenzae HI1004 [Escherichia coli] gi|1786645|gb|AAC73544.1| periplasmic folding chaperone, has an inactive PPIase domain [Escherichia coli str. K-12 substr. MG1655] gi|73854493|gb|AAZ87200.1| putative protease maturation protein [Shigella sonnei Ss046] gi|76365131|gb|ABA42059.1| peptidyl-prolyl isomerase [Escherichia coli] gi|81244340|gb|ABB65048.1| putative protease maturation protein [Shigella boydii Sb227] gi|85674581|dbj|BAE76221.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli str. K12 substr. W3110] gi|91071089|gb|ABE05970.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli UTI89] gi|110342294|gb|ABG68531.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli 536] gi|115511825|gb|ABI99899.1| peptidyl-prolyl isomerase [Escherichia coli APEC O1] gi|169756114|gb|ACA78813.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli ATCC 8739] gi|169887862|gb|ACB01569.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli str. K-12 substr. DH10B] gi|188491547|gb|EDU66650.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli 53638] gi|190906031|gb|EDV65646.1| peptidylprolyl isomerase [Escherichia coli F11] gi|192958940|gb|EDV89376.1| peptidylprolyl isomerase [Escherichia coli E110019] gi|218364120|emb|CAR01785.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli S88] gi|218425869|emb|CAR06675.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli ED1a] gi|218430822|emb|CAR11696.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli UMN026] gi|222032236|emb|CAP74975.1| Peptidyl-prolyl cis-trans isomerase D [Escherichia coli LF82] gi|226898774|gb|EEH85033.1| peptidyl-prolyl cis-trans isomerase [Escherichia sp. 3_2_53FAA] gi|227838634|gb|EEJ49100.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli 83972] gi|238861991|gb|ACR63989.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli BW2952] gi|260450372|gb|ACX40794.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli DH1] gi|291429415|gb|EFF02435.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli FVEC1412] gi|291471769|gb|EFF14252.1| conserved hypothetical protein [Escherichia coli B354] gi|294490510|gb|ADE89266.1| peptidylprolyl isomerase [Escherichia coli IHE3034] gi|298280287|gb|EFI21791.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli FVEC1302] gi|299880017|gb|EFI88228.1| PPIC-type PPIASE domain protein [Escherichia coli MS 196-1] gi|300315276|gb|EFJ65060.1| PPIC-type PPIASE domain protein [Escherichia coli MS 175-1] gi|300355993|gb|EFJ71863.1| PPIC-type PPIASE domain protein [Escherichia coli MS 198-1] gi|300407556|gb|EFJ91094.1| PPIC-type PPIASE domain protein [Escherichia coli MS 45-1] gi|300414627|gb|EFJ97937.1| PPIC-type PPIASE domain protein [Escherichia coli MS 115-1] gi|300452506|gb|EFK16126.1| PPIC-type PPIASE domain protein [Escherichia coli MS 116-1] gi|300843353|gb|EFK71113.1| PPIC-type PPIASE domain protein [Escherichia coli MS 78-1] gi|301074512|gb|EFK89318.1| PPIC-type PPIASE domain protein [Escherichia coli MS 146-1] gi|305853854|gb|EFM54293.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli NC101] gi|306907683|gb|EFN38185.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli W] gi|307552348|gb|ADN45123.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli ABU 83972] gi|307628089|gb|ADN72393.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli UM146] gi|308121479|gb|EFO58741.1| PPIC-type PPIASE domain protein [Escherichia coli MS 145-7] gi|309700702|emb|CBI99998.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli ETEC H10407] gi|312290768|gb|EFR18645.1| PPIC-type PPIASE domain protein [Escherichia coli 2362-75] gi|312945019|gb|ADR25846.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli O83:H1 str. NRG 857C] gi|315059721|gb|ADT74048.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli W] gi|315135123|dbj|BAJ42282.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli DH1] gi|315289841|gb|EFU49231.1| PPIC-type PPIASE domain protein [Escherichia coli MS 110-3] gi|315294225|gb|EFU53576.1| PPIC-type PPIASE domain protein [Escherichia coli MS 153-1] gi|315299565|gb|EFU58813.1| PPIC-type PPIASE domain protein [Escherichia coli MS 16-3] gi|315616618|gb|EFU97235.1| PPIC-type PPIASE domain protein [Escherichia coli 3431] gi|320186071|gb|EFW60816.1| Peptidyl-prolyl cis-trans isomerase ppiD [Shigella flexneri CDC 796-83] gi|320197085|gb|EFW71704.1| Peptidyl-prolyl cis-trans isomerase ppiD [Escherichia coli WV_060327] gi|323164242|gb|EFZ50049.1| PPIC-type PPIASE domain protein [Shigella sonnei 53G] gi|323379714|gb|ADX51982.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli KO11] gi|323938627|gb|EGB34876.1| ppic-type ppiase domain-containing protein [Escherichia coli E1520] gi|323943248|gb|EGB39404.1| ppic-type ppiase domain-containing protein [Escherichia coli E482] gi|323952947|gb|EGB48815.1| ppic-type ppiase domain-containing protein [Escherichia coli H252] gi|323958634|gb|EGB54337.1| ppic-type ppiase domain-containing protein [Escherichia coli H263] gi|324010072|gb|EGB79291.1| PPIC-type PPIASE domain protein [Escherichia coli MS 57-2] gi|324010655|gb|EGB79874.1| PPIC-type PPIASE domain protein [Escherichia coli MS 60-1] gi|324116929|gb|EGC10842.1| ppic-type ppiase domain-containing protein [Escherichia coli E1167] gi|331037759|gb|EGI09979.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Escherichia coli H736] gi|331051120|gb|EGI23172.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Escherichia coli M718] gi|331054746|gb|EGI26755.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Escherichia coli TA206] gi|331060244|gb|EGI32208.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Escherichia coli TA143] gi|331081038|gb|EGI52203.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Escherichia coli H299] Length = 623 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|118445143|ref|YP_879240.1| peptidil-prolyl cis-trans isomerase [Clostridium novyi NT] gi|118135599|gb|ABK62643.1| peptidil-prolyl cis-trans isomerase [Clostridium novyi NT] Length = 247 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 33/285 (11%), Positives = 82/285 (28%), Gaps = 47/285 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQELIVETLKKQEIEKS 93 M +++ T+NG IT+ DI + I ++ + +K +++LI + ++ Sbjct: 1 MENKVLATVNGREITENDIQESIKRFPKEQQAYLATEQGKKQLLEQLISFEVFYNYGKEM 60 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + + + N + Sbjct: 61 EYDKTKEYTTAI-------------------------------EIMERDALTQLSVNKVL 89 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + + E+ K+ V +I ++ K+ E Sbjct: 90 SQVELTDKEVEDYYNANKSNFVVGEMISAKHIL---------VDTEELAKEVAEEIKNGM 140 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 + K+++ G + + P+F+ + P TQ G I + Sbjct: 141 TFGDAATKYSTCPSKAQGGNLGKFGKGQMVPEFEEAAFNLEIGKVSEPVKTQFGYHLIQV 200 Query: 273 CDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 +K++ +K + + + A V++L+ + Sbjct: 201 EEKQEATEKSFDEVKDLIRTNLLQERQKVKYATTVEELKKKYNVE 245 >gi|257092906|ref|YP_003166547.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045430|gb|ACV34618.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 336 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 43/318 (13%), Positives = 91/318 (28%), Gaps = 52/318 (16%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVS-------YKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + + + S + A T+NG VI+ + + Sbjct: 1 MKLLNSRILLASAASLLVLGACNSDQNAKPAAVAPAAKEAAEATVNGVVISKKRVDMIVK 60 Query: 62 LL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 Q + E + V +LI++TL +E K G+ + Sbjct: 61 QAGGNGQADSPEARQGIVDKLIMQTLVAEEAVKKGLDKSPEVIEQI-------------- 106 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + + V++ + E+ ++ IT EY Sbjct: 107 ----------------DLMRQSVLASAYVQDLIKNGAASDEVLKAEYERIKATITGSEYK 150 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 R +L ++K + + K S G+ + Sbjct: 151 ARHILVEKEAEATAIIAKLKKDPGAFAKLAMEKSK---------DAGSKASGGELGWFDL 201 Query: 240 SDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 S + P+F + K + T P T G I + D + + E + Sbjct: 202 SRMVPEFAAAVSKLEKGAITQEPVKTPYGYHVIQLEDSKPI--EAPPFEEVKPHLAQQVQ 259 Query: 298 EKHEAEYVKKLRSNAIIH 315 +++ +++ L++ A I Sbjct: 260 QQNLKKHLDDLKAKAKIE 277 >gi|171915197|ref|ZP_02930667.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verrucomicrobium spinosum DSM 4136] Length = 351 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 25/328 (7%), Positives = 81/328 (24%), Gaps = 22/328 (6%) Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN----GEVITDGDISKRIAL 62 LS + L+ + + + A +R+ + + IT +++ + Sbjct: 14 HGLSWPVALVMVALIASVAAYW--WHLQDQAHEARVVARVGPATATQEITRHQVAEALRS 71 Query: 63 LKLQKI----------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 L ++ + A+ L+ + Sbjct: 72 LLWRRSETWESLSPQLQQQRRLEALDSLVSSHALHLWALTQPGNEHPTAAEDALQTFIKQ 131 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK-YGNLEMEIPANKQKMK 171 + + Q + + + ++ ++ + + EI A + Sbjct: 132 F-EIPDSWRQRSKLQQMNEAQLQAWVEEETRQRLAFDAEMSRRMARVTPDEIKAWLRDHA 190 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVS 230 + + + + + + + Sbjct: 191 TEVQIPERLSASHVFLSGHDKDKPDRTAEITAYHRRIIAGETTLSALAGEVSEDGRSNKL 250 Query: 231 IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAY 287 G + + F + + + P+ T+ G + + KR +A Sbjct: 251 GGSLGWFSRDRVPANFAEKAFAQKVGELSAPFRTELGWHIVLVHAKRPARPATLEEAQAE 310 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++A T + A+ +++ + Sbjct: 311 VAAHLTSVRRSAESAKLKEEILKLIPVE 338 >gi|154175136|ref|YP_001408066.1| trimethylamine-n-oxide reductase 1 [Campylobacter curvus 525.92] gi|112802868|gb|EAU00212.1| trimethylamiNe-n-oxide reductase 1 (tmaoreductase 1) (trimethylamine oxidase 1) [Campylobacter curvus 525.92] Length = 272 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 89/309 (28%), Gaps = 46/309 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI----SKRIALLKLQKINGE 71 + + I + +S + + T++GE I D DI + + K+ Sbjct: 1 MKKFLFPAILSLAAAISLNAA-----VVATVDGENINDTDISALLAAAMPGFDASKLQPN 55 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 +K + +LI L ++ + SGI D + Sbjct: 56 EKKRIIDDLINRKLLLKDAKASGIEKDPEYIKAV-------------------------- 89 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 A + I ++ + E+ K K+ + R + D K Sbjct: 90 -----QAAQEGIAVELYMRKIFDGIKTSDDELRNFYNKNKDSLNQPAQARASHILVEDEK 144 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 N Q + + + + K G+ + +S + F + + Sbjct: 145 TANAIIAQLKNLKGDALAKKFAELAQ--ADSIDKGSAAHGGELGWFGQSQMVKPFADAVF 202 Query: 252 KSQNNT--TNPYVTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKK 307 + T P +Q G I D + G K + K + + Sbjct: 203 SMSKGSVSTKPVKSQFGYHIILKEDSKPAGVVSFEQAKPQIEQAVKMEKFQNTIRQKGDA 262 Query: 308 LRSNAIIHY 316 LR+ A I Y Sbjct: 263 LRAKAKIEY 271 >gi|24111825|ref|NP_706335.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Shigella flexneri 2a str. 301] gi|30061943|ref|NP_836114.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Shigella flexneri 2a str. 2457T] gi|24050617|gb|AAN42042.1| putative protease maturation protein [Shigella flexneri 2a str. 301] gi|30040187|gb|AAP15920.1| putative protease maturation protein [Shigella flexneri 2a str. 2457T] gi|281599781|gb|ADA72765.1| putative protease maturation protein [Shigella flexneri 2002017] gi|332760732|gb|EGJ91020.1| PPIC-type PPIASE domain protein [Shigella flexneri 4343-70] gi|332761539|gb|EGJ91821.1| PPIC-type PPIASE domain protein [Shigella flexneri 2747-71] gi|332768363|gb|EGJ98547.1| PPIC-type PPIASE domain protein [Shigella flexneri 2930-71] gi|333008057|gb|EGK27533.1| PPIC-type PPIASE domain protein [Shigella flexneri K-218] gi|333021934|gb|EGK41182.1| PPIC-type PPIASE domain protein [Shigella flexneri K-304] Length = 623 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLV 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|323191361|gb|EFZ76624.1| PPIC-type PPIASE domain protein [Escherichia coli RN587/1] Length = 623 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|320109145|ref|YP_004184735.1| SurA domain-containing protein [Terriglobus saanensis SP1PR4] gi|319927666|gb|ADV84741.1| SurA domain protein [Terriglobus saanensis SP1PR4] Length = 360 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 102/336 (30%), Gaps = 41/336 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI----- 75 +LI + ++ + + ++NG+ I D+ + Q N + Sbjct: 16 LLIAGTLSLALTGCHPTHGADVVASVNGKAIPRADLDRFYQSQMAQNQNQQPVNEDQADS 75 Query: 76 ----AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 ++ LI E + +Q K +T + V+ + + E F+ L Sbjct: 76 ARLTILRSLIDEEIIQQRAAKMNLTASNEDVDAKVTEMKA--PYTEEQFNERLKASNHTL 133 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT--------- 182 + K+ + + ++ + K + ++ + K+ Sbjct: 134 DDMKREIRRSLTFDKLLNKEINSKINITDGDVSSYYAAHKSEYNLMETQYHLGQVLVTSF 193 Query: 183 ---VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238 ++ +K N +K+I+ + F+ + G ++ Sbjct: 194 PSPQAVNLQSSKATNDAEAKKKIQTLKNRIDSGEDFSAIAMNFSENPQTAQNGGDMGFIS 253 Query: 239 ESDLHPQFQNL---LKKSQNNTTN----------PYVTQKGVEYIAICDKRDLG----GE 281 ES LH + K T+ P G + + + G + Sbjct: 254 ESQLHTDILSYTAVTKLKAGQVTDILPVFDQPASPSKKVVGYVILKLISRDAAGQRLLTD 313 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 A++ + Q + + Y + LR+ + + Y Sbjct: 314 PAVQQNIRQQLHDARSTLLKNAYFEMLRNQSKVENY 349 >gi|262404271|ref|ZP_06080826.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio sp. RC586] gi|262349303|gb|EEY98441.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio sp. RC586] Length = 619 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 32/403 (7%), Positives = 98/403 (24%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y + + + I+ GD + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYL-ISGGNNAAAKVGNAEISRGDFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + K + ++ + L +Q G+ V Sbjct: 60 QNERNRMQSQLGDYFSNLLADPTYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDQQVRQ 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 Q E + + L + G + F +YL + ++ Sbjct: 120 MILDMPQFQSQGQFDQELYQAALRRAGFTPDMFAEYLRKDLVRNQLMSALQGSEFSLPGE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 DF K + +I + R ++ + Sbjct: 180 VNLQDQLISQTRDIRTITLSLADFAKKVTLSDDDIQQYYKANTERFTRPEQMKVSYVELS 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 + L+ Q + +++ + + Sbjct: 240 ADALKKQIMIDDEAAQEYYQEHLDKYSTAEQRKVSHILVEGSDEQKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ + ++ G I + Sbjct: 300 ATVAKEKSQDVGSAQEGGALGWIERDTMDPAFEAAAFALTENGQISGLVKSEFGYHIIRL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + + + + + + +L A Sbjct: 360 DEVKAPVVKPYTEVAKAVKQELVDQQALDAFYTKQSELEKLAF 402 >gi|223936140|ref|ZP_03628054.1| PpiC-type peptidyl-prolyl cis-trans isomerase [bacterium Ellin514] gi|223895362|gb|EEF61809.1| PpiC-type peptidyl-prolyl cis-trans isomerase [bacterium Ellin514] Length = 350 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 39/324 (12%), Positives = 102/324 (31%), Gaps = 20/324 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDIS----KRIALLKL 65 I + + +L + + + A + + IR + +IT + + ++ Sbjct: 27 IYRMRFFCILTLTGLSFCSAMCLNARAELVNGIRAIVADSIITYQQVELLVGRDADFIRH 86 Query: 66 QKINGELEKIA---------VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 Q N E + LI L + + SG ++ + Sbjct: 87 QYQNNPQEYQLRMVDLMGKGLTNLIQRELVLHDFQNSGFNVPETIIDEIVQDRIKEKYSD 146 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + L K+G+ FK+ + I+ ++ + + +I Q+ + Sbjct: 147 RVQLTKQLQKEGLTFEQFKKQIRDDLIYREMYRKNVPETI-MSPHKIETFYQEHQADFKV 205 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 I+T + + +G +KR ++ ++ G A + Sbjct: 206 ADEIKTRIIVLNKPADDTEGSTKKRAQEIISQLKNGAAFSEMASVYSEGSTRAQGGDAGW 265 Query: 237 LLES-DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNT 293 S L P + + K T+ T + + D+R + ++ + T Sbjct: 266 QETSVVLKPIAEAVSKLKSGEYTDVIETPTACFLVLLEDRRPAHVKPLRDVQDDIERTLT 325 Query: 294 PTKIEKHEAEYVKKLRSNAIIHYY 317 + + +++ ++ + ++ Sbjct: 326 AQENFRLYRKWIDRIEKKTFVRFF 349 >gi|295694759|ref|YP_003587997.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus tusciae DSM 2912] gi|295410361|gb|ADG04853.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus tusciae DSM 2912] Length = 305 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 95/302 (31%), Gaps = 24/302 (7%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-----ELEK 74 +F + + + SS + T +G + ++ K+ L +L + Sbjct: 6 LAGALFVTLLAILALAGCGSSDVVATFDGGQVHRAELDKQFKLQRLLIAPQYPDTPQNRL 65 Query: 75 IAVQELI-VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +Q+ I + + Q+ ++ GIT + Q+ + + L+K+ Sbjct: 66 EVLQQYIVMHDILDQKAKQEGITVSDKELADTVAQYRQQLIQYVYGNADALNKKMAELGL 125 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 L + + + F + EI A + + ++ Sbjct: 126 QDNDLQALARDDILAQKYFAKHLSVSDEEIQAYYKDHPADYTIAKVAHILV--------- 176 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 ++ + E L+ ++ + G+ S FQ+ K Sbjct: 177 ---KTKQEAEQVEARILKGESFAQIAKEVSLDPSKDQGGELPEGPLSQWVGPFQDAAMKL 233 Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 ++P TQ G + + +R + +K + + K ++ + + + +A Sbjct: 234 PIGQISDPVQTQFGWHILRVDSRR-VEPLSQVKDQVKNKVMQMKEQQ----WFNQAKQDA 288 Query: 313 II 314 I Sbjct: 289 HI 290 >gi|293603514|ref|ZP_06685936.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC 43553] gi|292818100|gb|EFF77159.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC 43553] Length = 335 Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 35/285 (12%), Positives = 85/285 (29%), Gaps = 40/285 (14%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GELEKIAVQELI 81 + K I ++ +VIT ++ + + + L+ +Q LI Sbjct: 51 APAPKGEQFVDGIAAVVDKDVITLRELRDASVRISSELKSRGIQVPDDQTLQHQVLQRLI 110 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 +E +++ E ++ GI D V+ A +S + ++K G G + +++ L + Sbjct: 111 MERVQRHEADRLGIRVDDAQVDQAIQTIAARNKISVAQLRAEIEKSGAGWDAYRKSLREE 170 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI---------------------------- 173 + + + E+ A + + Sbjct: 171 IRTDRLRQRAVDSNIVISDTEVDAFLKDQRRNPAFGAAPQAQPEPQPQAQPQPAPEQAAA 230 Query: 174 --TVREYLIRTVLFSIPDNKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 Y + +L +P+ Q ++K+ +D R + + + Sbjct: 231 PSGPMLYALAQILVRVPEGSSPEQLAALRKKAEDVLARAKRGDDFASLAAASSDGPEALQ 290 Query: 231 IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICD 274 G F + + + + + G I + D Sbjct: 291 GGVMGVRPLDGWPDLFVKAISNLQKGQVSGLIQSGNGFHIIKVMD 335 >gi|256020413|ref|ZP_05434278.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Shigella sp. D9] gi|332281592|ref|ZP_08394005.1| conserved hypothetical protein [Shigella sp. D9] gi|320201685|gb|EFW76261.1| Peptidyl-prolyl cis-trans isomerase ppiD [Escherichia coli EC4100B] gi|332103944|gb|EGJ07290.1| conserved hypothetical protein [Shigella sp. D9] Length = 623 Score = 98.2 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|218549891|ref|YP_002383682.1| peptidyl-prolyl cis-trans isomerase [Escherichia fergusonii ATCC 35469] gi|218357432|emb|CAQ90071.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia fergusonii ATCC 35469] Length = 638 Score = 98.2 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 38/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +NG+ I+ G Sbjct: 16 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNGQEISRGQFENAF 74 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + V Sbjct: 75 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYSRDLKLGISDEQVKQ 134 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 +++ L++ G+ + + Q L Q ++ Sbjct: 135 AIFATPAFQVDGKFDNSRYNAILNQMGMSADQYAQALRNQLTTQQLINGIAGTDFMLKGE 194 Query: 149 ---------KNDFMLKYGN-----------LEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + + EI + + KN V R + Sbjct: 195 TDELAALVSQQRVVREATIDVNAKAEKQQVSDAEITSYYDQHKNNFVTPEQFRVSYIMLD 254 Query: 189 DNKLQNQGFVQKRIKDAEESRLRL-----------------------------PKDCNKL 219 +Q ++ + + Sbjct: 255 AANIQQPVSDADIQAYYDQHQDQFTQPQRVRYSIIQTKTENEAKAVLDALNNGGDFAELA 314 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L +S + ++ K + + + G + + D + Sbjct: 315 KEKSADIISARNGGDLGWLEDSTTPQELKDAGLKDKGQLSGVIKSSVGFLVVRLDDVQPA 374 Query: 279 GGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 375 KVKTLAEVRDDIAAKVKHEKALDAYYALQQKVSDAA 410 >gi|218693904|ref|YP_002401571.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli 55989] gi|218350636|emb|CAU96328.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli 55989] Length = 623 Score = 98.2 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y + + +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYL-ISGGNNYAAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|194435312|ref|ZP_03067524.1| peptidylprolyl isomerase [Shigella dysenteriae 1012] gi|194416444|gb|EDX32601.1| peptidylprolyl isomerase [Shigella dysenteriae 1012] gi|332085739|gb|EGI90903.1| PPIC-type PPIASE domain protein [Shigella dysenteriae 155-74] Length = 623 Score = 98.2 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 105/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFAIPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEESRLRL-----------------------------PKDCNKL 219 +Q ++ + + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDGLNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|323963431|gb|EGB58993.1| ppic-type ppiase domain-containing protein [Escherichia coli H489] Length = 623 Score = 98.2 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|320178277|gb|EFW53251.1| Peptidyl-prolyl cis-trans isomerase ppiD [Shigella boydii ATCC 9905] Length = 623 Score = 98.2 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|311106582|ref|YP_003979435.1| peptidyl-prolyl cis-trans isomerase [Achromobacter xylosoxidans A8] gi|310761271|gb|ADP16720.1| peptidyl-prolyl cis-trans isomerase [Achromobacter xylosoxidans A8] Length = 653 Score = 98.2 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 43/408 (10%), Positives = 106/408 (25%), Gaps = 98/408 (24%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +++ + ++ F +V I Y S+ + T+NG+ +T + + Sbjct: 1 MFEFIRSH-RRWMQFILLLLIVPSFFLVGIQGYDSFMRAEPELATVNGQPVTRAEFDQAH 59 Query: 61 ALLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSN---TVNY 104 Q L + + +LI + L + + Sbjct: 60 RNQLEQFRQRLGAQFDPAVIDTPALREGLLNQLINQRLLANVAVDNRFSVSDETLRNTIA 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK--------------- 149 + N S E + L QG+ F+ L V++ Sbjct: 120 AIPEVQDNGRFSPERYRQVLAAQGMSPTSFEAGLRRDLAVARVLEPVGQSARAPGEVVAA 179 Query: 150 ------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 DF + +I A K ++ + + Sbjct: 180 LETALTQQRTVQLRRFAAADFRSQVSATPADIQAWYDANKQQLQIPEQVQVQYLVLDEAA 239 Query: 192 LQNQGFVQKRI--KDAEESRLRLPKD----------------------------CNKLEK 221 V+ E+++ R + + ++ Sbjct: 240 ATQGVQVKDEDLASYYEQNKNRFGQPERRRASHIMINLAPGASEDARKAARAKAEDLAKQ 299 Query: 222 FASKI---------------HDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQK 265 A+ + G +L L P + + ++++ + T Sbjct: 300 AAADPAQFAELARKNSQDAGSAANGGDLGWLAPGMLTGPLEKAIFGQAKDQVSGVIETPS 359 Query: 266 GVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 G+ + + + + +K ++A+ +E +L Sbjct: 360 GLHVVKVTEIQPAAIKPLAEVKDQITAEVRKQLAAVRFSEMASQLNKQ 407 >gi|325479565|gb|EGC82661.1| putative peptidylprolyl isomerase PrsA2 [Anaerococcus prevotii ACS-065-V-Col13] Length = 354 Score = 98.2 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 91/284 (32%), Gaps = 23/284 (8%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLK-LQKINGELEKIAVQELIVETLKKQEIEK 92 S + + ++GE I+ D ++ + +L+ V ++ + L +I+K Sbjct: 43 SSEKLDDKTVAIVDGEKISKDDYKSELSFYASMLASQQQLKNSIVTMMVQDKLIANDIKK 102 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 + I D V +Q +N G + D D + + + F Sbjct: 103 NDIKVDDKEVEDALMQSVQNFGGQENFDKTLDDYNMELDKFKETLKKD--LMYKKHREWF 160 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 + EI + K+ + ++ ++ D + Sbjct: 161 DENNKVTDDEIKKYFEDNKDEFAKVDASHILV------------EDEQTANDIKARLDNG 208 Query: 213 PKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 + ++++ + G + + +F++ + + P +Q G I Sbjct: 209 EDFASLAKEYSKDTASAQNGGALGAFAKGQMVKEFEDAAFSMKEGEISAPVKSQFGYHII 268 Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + +D K ++ + K A+Y+KKL + + Sbjct: 269 KVNSIKD--SFEDSKEEITKKIKDQK----YADYIKKLHEESNV 306 >gi|331645617|ref|ZP_08346721.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Escherichia coli M605] gi|331045779|gb|EGI17905.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Escherichia coli M605] Length = 623 Score = 98.2 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 39/396 (9%), Positives = 103/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREAAIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|281177612|dbj|BAI53942.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli SE15] Length = 623 Score = 98.2 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 39/396 (9%), Positives = 103/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREAAIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|332341805|gb|AEE55139.1| peptidyl-prolyl cis-trans isomerase PpiD [Escherichia coli UMNK88] Length = 623 Score = 98.2 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|331671987|ref|ZP_08372783.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Escherichia coli TA280] gi|320173739|gb|EFW48922.1| Peptidyl-prolyl cis-trans isomerase ppiD [Shigella dysenteriae CDC 74-1112] gi|331070976|gb|EGI42335.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Escherichia coli TA280] Length = 623 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|169633358|ref|YP_001707094.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii SDF] gi|169152150|emb|CAP01052.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii] Length = 441 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 105/314 (33%), Gaps = 20/314 (6%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIA----LLKLQK- 67 K L +F ++ S S+A + + ++ VI D+ + +A L+ QK Sbjct: 9 KHLKQFFKATTLAVLISSSMHSFAQPTDEVVAIVDNSVILKSDLEQGMAEAAHELQAQKK 68 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSS 122 L+ + +LI+ + ++++K GI D ++N ++ A +G Sbjct: 69 EVPPQQYLQFQVLDQLILRQAQLEQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQK 128 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + + +A + + M + + ++ + + Sbjct: 129 LDAIAPGTYENLRSRIAEDLAINRLRQQQVMSRIKISDQDVDNFLKSPQGQAALGNQAHV 188 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + I + Q V K ++ L N L+KF++ V + SD+ Sbjct: 189 IHMRISGDNPQEVQNVAKEVRSQLAQNNDL----NALKKFSTATVKVEGADMGFRPLSDI 244 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD----LGGEIALKAYLSAQNTPTKI 297 + + TT+ + GV + + +++ ++ Q + Sbjct: 245 PAELAARITPLQDGQTTDLISVRDGVHVLKLLERKQNEQKALVPQYQTRHILIQPSEVVS 304 Query: 298 EKHEAEYVKKLRSN 311 ++ + + + Sbjct: 305 PENAKQIIDSIYKR 318 Score = 88.2 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 30/270 (11%), Positives = 89/270 (32%), Gaps = 6/270 (2%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 I+D D+ + + Q G + + I ++ + N Sbjct: 163 KISDQDVDNFLKSPQGQAALGN-QAHVIHMRISGDNPQEVQNVAKEVRSQLAQNNDLNAL 221 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + + + + + + + + D + I + + ++ G +++ KQ Sbjct: 222 KKFSTATVKVEGADMGFRPLSDIPAELAARITPLQDGQTTDLISVRDGVHVLKLLERKQN 281 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HD 228 + V +Y R +L +++ + ++ I + +++ Sbjct: 282 EQKALVPQYQTRHILIQP--SEVVSPENAKQIIDSIYKRLKAGEDFATLAATYSNDTGSA 339 Query: 229 VSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKA 286 G ++ + P+F + + + + P+ TQ G + + DKR+ + Sbjct: 340 RDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHILQVTDKREKDMTHEYQER 399 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +++++R+NA + Sbjct: 400 MARQILGERQFNTEIDSWLREVRANAYVEI 429 >gi|333008127|gb|EGK27602.1| PPIC-type PPIASE domain protein [Shigella flexneri VA-6] Length = 623 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLV 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|304395503|ref|ZP_07377386.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pantoea sp. aB] gi|304356797|gb|EFM21161.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pantoea sp. aB] Length = 622 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 35/396 (8%), Positives = 102/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + +++ F + + +Y + +NG+ I+ G + + Sbjct: 1 MMDNLRAASNNVVLKIILGLIMVSFVLTGVGNYLIGGNNDY-AAKVNGQEISRGQLEQAF 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + ++ ++ + A+ +LI + L I+ ++ + V Sbjct: 60 NSERSRQQQMLGDQFSQLASNDGYMQQIRQQALSQLIDQALLDSYIKDLHLSISDDQVKQ 119 Query: 105 FFVQHARNTGLSAEDFSSFLD---KQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 D + +L G + + + L Q ++ Sbjct: 120 AIFNQQAFQTNGKFDNAKYLALIGNMGFSADQYAEALRKQLSNQQLINAVANTDFTLKGE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K + EI Q+ K + R + Sbjct: 180 ASKLVDLVSQQRDIRQATLDVNALAAKQTVTDDEISQYYQQHKTSFMAPEQFRVSYILMD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AASMQQDASEADIQAWYDQHKADYTQPQRTRYSVIQTKTEADANAVLAQLKGGASFADVA 299 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 + + G +L S + +N + + + G + + D + Sbjct: 300 KAKSIDPISARKGGDMGWLEPSTTPDELKNAGLTQKGQMSGVIKSSVGFLVVRLDDIQPE 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + +++ ++A+ K + +K+ A Sbjct: 360 QVKPLNDVRSAIAAKVKQEKGVDAFYKLQQKVSEAA 395 >gi|157156448|ref|YP_001461628.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli E24377A] gi|157078478|gb|ABV18186.1| peptidylprolyl isomerase [Escherichia coli E24377A] Length = 623 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|183597819|ref|ZP_02959312.1| hypothetical protein PROSTU_01149 [Providencia stuartii ATCC 25827] gi|188022575|gb|EDU60615.1| hypothetical protein PROSTU_01149 [Providencia stuartii ATCC 25827] Length = 439 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 103/307 (33%), Gaps = 16/307 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +++ + + ++ +N V+ + D+ + +KL N L Sbjct: 7 LILGLMFASSTALAAPQQMDKVAAVVNNGVVLESDVQNMLNTVKLNARNAGQQIPDDETL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI + + Q + I VN AR GL+ E + L GI Sbjct: 67 RHQILERLITDNIMLQMANQMQINIPEEAVNATIADIARQNGLTFEQMQARLKADGIDMA 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + +V N+ + L E+ + +++ + E + IP + Sbjct: 127 KYRSEIRKEMLIAEVRNNEVRRRVTILPQEVESLAKQISSQADYEASVNLSHILIPLPEN 186 Query: 193 QNQGFVQKRI---KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248 Q +QK + + +++ + G + +L F + Sbjct: 187 PTQEQLQKADAIVAKIMDEIKKGTNFGKLAIAYSADPQALKGGNMGWSRLQELPVVFAEQ 246 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDK----RDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 L + + P + G + + + + + ++ +++P + + Sbjct: 247 LKSAKKGDVVGPIRSGVGYHILRVNEMNSANKTISVTEVKARHILIKSSPIMDDNQARQK 306 Query: 305 VKKLRSN 311 + ++ + Sbjct: 307 LTQITQD 313 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 60/166 (36%), Gaps = 4/166 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G + + K I+V E R +L NQ QK + ++ R Sbjct: 259 IRSGVGYHILRVNEMNSANKTISVTEVKARHILIKSSPIMDDNQA-RQKLTQITQDIRSG 317 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269 N ++F+ + G+ + + P F++ ++ ++ + P + G Sbjct: 318 KTTFENAAKEFSEDPGSALKGGELGWNMPDVYDPAFRDALMRLNKGEISQPVRSNFGWHL 377 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I + D R++ + A K K + +V++ R+ A + Sbjct: 378 IQLEDTRNVDKTDAAQKDQAYRLLFNRKFNEEAQSWVQEQRAAAYV 423 >gi|313672612|ref|YP_004050723.1| ppic-type peptidyl-prolyl cis-trans isomerase [Calditerrivibrio nitroreducens DSM 19672] gi|312939368|gb|ADR18560.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Calditerrivibrio nitroreducens DSM 19672] Length = 313 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 30/297 (10%), Positives = 90/297 (30%), Gaps = 17/297 (5%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALL------------KLQKINGELEKIAVQELIV 82 S + + I++ +++ + + + E++ V+ L+ Sbjct: 15 SVFAADVTVAKVGKVNISEKEVNIILNDIVMKQGIDPRTIDQNNPKVAEVKNDIVKNLVQ 74 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + KS + + + + ++ ++ Sbjct: 75 REILLTLAMKSIPKDIDKKTSESYENLKKKYKDPKDFENAMKSAGTNEKEVKEKIKKNLI 134 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + V N E E +K K+I +++ I + QN + +I Sbjct: 135 LENYV--NSIAKDIKITEQEKKDFYEKNKDIFKDPEMVKASHILIKVDDKQNDKDAKSKI 192 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPY 261 + +K++ + G + + +F+N+ + + P+ Sbjct: 193 DSIYKELKSGKSFEELAKKYSQDGSAANGGDLGFFPRGAMVKEFENVAFSTPAGKFSEPF 252 Query: 262 VTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 TQ G + + +KR + ++ + K++ + V++ + + + Sbjct: 253 KTQYGYHIVKVTEKRPAKTYTYEEVSNHIEGKLRMDKLKGILDKKVEEGKKSVKVEI 309 >gi|193064188|ref|ZP_03045272.1| peptidylprolyl isomerase [Escherichia coli E22] gi|194428997|ref|ZP_03061529.1| peptidylprolyl isomerase [Escherichia coli B171] gi|260842642|ref|YP_003220420.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O103:H2 str. 12009] gi|192929217|gb|EDV82827.1| peptidylprolyl isomerase [Escherichia coli E22] gi|194412934|gb|EDX29224.1| peptidylprolyl isomerase [Escherichia coli B171] gi|257757789|dbj|BAI29286.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O103:H2 str. 12009] gi|323160448|gb|EFZ46396.1| PPIC-type PPIASE domain protein [Escherichia coli E128010] Length = 623 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 105/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEESRLRL-----------------------------PKDCNKL 219 +Q ++ + + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNEGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|260853664|ref|YP_003227555.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O26:H11 str. 11368] gi|257752313|dbj|BAI23815.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O26:H11 str. 11368] gi|323153478|gb|EFZ39732.1| PPIC-type PPIASE domain protein [Escherichia coli EPECa14] Length = 623 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKVVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|209917658|ref|YP_002291742.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli SE11] gi|218553008|ref|YP_002385921.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli IAI1] gi|293418512|ref|ZP_06660947.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli B088] gi|300818227|ref|ZP_07098438.1| PPIC-type PPIASE domain protein [Escherichia coli MS 107-1] gi|209910917|dbj|BAG75991.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli SE11] gi|218359776|emb|CAQ97317.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli IAI1] gi|291325040|gb|EFE64455.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli B088] gi|300529118|gb|EFK50180.1| PPIC-type PPIASE domain protein [Escherichia coli MS 107-1] gi|323184728|gb|EFZ70099.1| PPIC-type PPIASE domain protein [Escherichia coli 1357] gi|323945347|gb|EGB41403.1| ppic-type ppiase domain-containing protein [Escherichia coli H120] gi|324016698|gb|EGB85917.1| PPIC-type PPIASE domain protein [Escherichia coli MS 117-3] Length = 623 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|159043736|ref|YP_001532530.1| SurA domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157911496|gb|ABV92929.1| SurA domain protein [Dinoroseobacter shibae DFL 12] Length = 398 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 97/248 (39%), Gaps = 5/248 (2%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + + +L + ++ + + T+N E I+ ++ +R + ++ G+ + Sbjct: 2 RVISTALLALAMLIGQPATSQAQTFGPVI-TVNNEGISGYELEQREKFVTALRLPGDPAR 60 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 +A + LI + LK Q +G+ + + + A L+ E F + L +G+ F Sbjct: 61 LAREGLIEDKLKLQAARAAGLEIGIDELELGLEEFASRANLTTEQFIAALADEGVAPETF 120 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + ++ +W ++++ F + + E+ + + ++ P ++ Sbjct: 121 RDFVRADLVWRELIRQRFGPRARVSDAEVERALALQGAASGARIRVAEIIIPTPPDRRVE 180 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS- 253 + I++ ++ + ++F++ + G ++ S+L P L Sbjct: 181 AETLAANIRERVQTTAQFS---EAAQRFSAASSRANGGLRDWIAVSELPPGLAQRLLTLG 237 Query: 254 QNNTTNPY 261 + ++P Sbjct: 238 PGDVSDPV 245 Score = 40.4 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 1/77 (1%) Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 +++ L N + G E+I +C R E + L Q ++ Sbjct: 323 AAEIPSDIATALAGLDNQESTEIARAGGREHIMLC-TRTTALEEDDEGTLRRQLLNQRLG 381 Query: 299 KHEAEYVKKLRSNAIIH 315 + A Y+++L + A I Sbjct: 382 SYAANYLQELLAEATIQ 398 >gi|258513569|ref|YP_003189791.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfotomaculum acetoxidans DSM 771] gi|257777274|gb|ACV61168.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfotomaculum acetoxidans DSM 771] Length = 327 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 90/297 (30%), Gaps = 29/297 (9%) Query: 41 RIRTTINGEVITDGDISKRIALLK---------------LQKINGELEKIAVQELIVETL 85 + T+NGE IT + KR++++K QK+ ++ + E+I +TL Sbjct: 23 NVVATVNGEEITQQQLDKRVSIVKDYYEKQYGQKIEGQDAQKLIDNMKPGLLDEMISDTL 82 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 K+QE K G + + K + + + Sbjct: 83 KRQEARKVGKDMTDQQIQEKIDGVKKQFPNEEAF------KNFLAQQDLTEKDMAYMLNL 136 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK----LQNQGFVQKR 201 V + E++ ++ K + T +Y +R +L S + + +K Sbjct: 137 QDVVLKDVKAPTEEEVQEYYDQNKEQFKTAEQYEVRHILISTDPDDAGNVKHTEAEAEKL 196 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTT-N 259 + + + G + D P+F+ T Sbjct: 197 AVQVLADIKNGKDFAALAREKSEDLGSKDNGGLYTFKKGDTVPEFEKAALALKPGEYTRE 256 Query: 260 PYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P TQ G I + +K + Q + Y++ L+ A I Sbjct: 257 PVKTQFGYHIIKLEKLIPARDQSFAEVKDGIKQQLDQEAKKNKFNAYLEDLKKKAKI 313 >gi|15893571|ref|NP_346920.1| peptidil-prolyl cis-trans isomerase [Clostridium acetobutylicum ATCC 824] gi|15023118|gb|AAK78260.1|AE007541_5 Peptidil-prolyl cis-trans isomerase [Clostridium acetobutylicum ATCC 824] gi|325507691|gb|ADZ19327.1| Peptidil-prolyl cis-trans isomerase [Clostridium acetobutylicum EA 2018] Length = 247 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 29/282 (10%), Positives = 78/282 (27%), Gaps = 39/282 (13%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 M +++ +NG+ IT+ D++ I ++ L + L+ E + Sbjct: 1 MENKVLAVVNGQEITESDLNATINSFPEERRRQFLNPEGRKRLLDEIV------------ 48 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 A+++G+ ++ + Q + + Sbjct: 49 ----SFELVYNDAKDSGIEEQEVVKAQIEN----------ARKQILTHASLD-KIFSDIV 93 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + E+ + K + + ++ E Sbjct: 94 VADSEVEKYYEANKEMFKDPEKVAAKHIL---------VQTEEDALKIREEIKEGKTFEE 144 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276 +++S G + P+F+ + P TQ G I + K Sbjct: 145 AAAEYSSCPSKERGGDLGAFTRGQMVPEFEEAAFSQEIGEVGAPVKTQFGYHLIKVEGKI 204 Query: 277 DLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++K + + + + Y+ +L++ + Sbjct: 205 EPAQRDFPSVKDAIKNRLLQERQSMKYSWYIDQLKNKYKVEI 246 >gi|120599410|ref|YP_963984.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. W3-18-1] gi|146292594|ref|YP_001183018.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella putrefaciens CN-32] gi|120559503|gb|ABM25430.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. W3-18-1] gi|145564284|gb|ABP75219.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella putrefaciens CN-32] gi|319425896|gb|ADV53970.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella putrefaciens 200] Length = 618 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 41/405 (10%), Positives = 94/405 (23%), Gaps = 93/405 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ I V++ F + SY + + +NG+ IT ++ + Sbjct: 1 MLEKIRDGSQGVIAKSILVLVILSFAFAGVSSYLG-STTDVPAAEVNGDKITKAELEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +++ ++ L+ + L Q G+ + Sbjct: 60 QSERSRMEQQLGEMFAALSADERYLESIKQSVLERLVADKLIDQAASTMGLRVSDEQIIT 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + E + + L + G F+ + + + Sbjct: 120 AIKLEPAFQTDGKFDNERYQAILRQLGYQPQSFRNMMRVDMTRRQLTAALVGTEFVLPSE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 F+ + ++ + + + Sbjct: 180 AKQLAELQGQTRDIRYLVVDSAPFLANATVTDEQVKNYYDANQGQFMSPEQVSLEYVELN 239 Query: 185 ---------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK---- 225 + D +KR+ K A + Sbjct: 240 AADFAKNSPVTDEEAQAYYDEHKTQYLANEKRLAAHILINADQDDAATKAADLAKQLDNG 299 Query: 226 --------------IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYI 270 + GK ++ + P F L ++ + T G I Sbjct: 300 ADFAELAKAHSDDRLSAEQGGKLEWFEPGVMEPTFDAALFALNKGEHSAVVKTGFGYHII 359 Query: 271 AICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + D + +KA + AQ K KL + Sbjct: 360 KLLDVQAGATVPFADVKAKIVAQLQDKKAVDQFYSLQSKLADTSY 404 Score = 36.6 bits (82), Expect = 4.7, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 40/131 (30%), Gaps = 4/131 (3%) Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 N K+ + E +R + + +++ A+ + VS K ++ Sbjct: 485 EVKANITERLKQDQANEAARAKAQELMTQVKAAATDLGLVSKVKLGRGEQNVDAAIVGKA 544 Query: 250 LKKSQNNTTNPYVT---QKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYV 305 + ++T G IA+ L L + E + Sbjct: 545 FQMPTPSSTPVVDIVGLANGYAVIALDKVNAAEGVSDELVNALKQRLNAQYSEADYRGLI 604 Query: 306 KKLRSNAIIHY 316 L++NA + Y Sbjct: 605 DSLKANAKVVY 615 >gi|333010902|gb|EGK30328.1| PPIC-type PPIASE domain protein [Shigella flexneri K-272] gi|333020704|gb|EGK39964.1| PPIC-type PPIASE domain protein [Shigella flexneri K-227] Length = 623 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 105/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 + ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATSAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPATEQEIASYYEQNKNNFMTSEQFRVSYIKLV 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AAMMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|289579378|ref|YP_003478005.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter italicus Ab9] gi|289529091|gb|ADD03443.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter italicus Ab9] Length = 301 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 89/305 (29%), Gaps = 16/305 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-KINGELEK 74 + LI+ + S + + T+NGE IT+ + K +K Q + + + K Sbjct: 1 MKRKIALILSFGFIVFLLVSCSAKKEVVATVNGENITNAEYRKAFDQVKAQIESSPQYTK 60 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + ++++ + N ++ ++ ++ + Sbjct: 61 DIWNQDYEGKKFLDVVKENVLDSLIAQKLLLQEALKNNVTVTDKEIEEEYQREKEFNKDI 120 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + + + + ++ E E+ + K+ ++ Sbjct: 121 TKEEVKNYLLINKLFEEYTKDVKVTEEELKKYYEDNKDRFETVKASHILVSD-------- 172 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K +D ++ ++++ G + P+F+ + Sbjct: 173 ----EKIAQDIYNRLMKGEDFSTLAKEYSIDTATKDQGGDLGEFARGVMVPEFEQVAFSL 228 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + P T G I + L +K + A K + E L A Sbjct: 229 KKGEISKPVKTDYGYHIIK-SEGATLKSFDEVKGDIEAYLLNDKKNQVITEKYDALEKAA 287 Query: 313 IIHYY 317 I + Sbjct: 288 KIQKF 292 >gi|317046868|ref|YP_004114516.1| SurA domain-containing protein [Pantoea sp. At-9b] gi|316948485|gb|ADU67960.1| SurA domain protein [Pantoea sp. At-9b] Length = 431 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 34/279 (12%), Positives = 95/279 (34%), Gaps = 18/279 (6%) Query: 52 TDGDISKRIALLKLQK--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + D+ + +K Q + L ++ I++++ Q EK+G+ ++ Sbjct: 38 LESDVDSMLRTVKAQAQQAHQQLPDDNTLRHQILERQIMDSIVLQMGEKAGLQISDQQLD 97 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 A ++ + S + GI N ++ + + + +V N+ + L E+ Sbjct: 98 EAIQNIAGQNHMTLDQLRSRIAYDGINYNEYRAQIRKEMMISEVRNNEVRRRVTILPQEV 157 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLE 220 +++ + + + +P + Q V + A + + Sbjct: 158 DTLAKQIGSQNTQGTELNVSQILLPLPENPTQQQVDDQEALARQLVGELKKGADFGKLAV 217 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR--- 276 +++ + G + +L F Q L + + P + G + + D R Sbjct: 218 TYSADPQALKGGNMGWSKIEELPSLFSQALATAQKGDVVGPIRSGVGFHILKVNDLRGES 277 Query: 277 -DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 ++ ++ + +P + ++++ A I Sbjct: 278 KNISVTEVHARHILLKPSPILTDDQARAKLEEI--AADI 314 Score = 83.6 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 84/289 (29%), Gaps = 25/289 (8%) Query: 47 NGEV-----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 N EV I ++ + Q G ++ L E D Sbjct: 143 NNEVRRRVTILPQEVDTLAKQIGSQNTQGTELNVSQILL-----PLPENPTQQQVDDQEA 197 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + V + + ++ + I+ + + Sbjct: 198 LARQLVGELKKGADFGKLAVTYSADPQALKGGNMGWSKIEELPSLFSQALATAQKGDVVG 257 Query: 152 -FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 G +++ + + KNI+V E R +L +Q K + A + R Sbjct: 258 PIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPILTDDQA-RAKLEEIAADIRS 316 Query: 211 RLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVE 268 ++++ G + P F++ ++ + T+ P + G Sbjct: 317 GKITFAAAAKQYSDDPGSANQGGDLGWTSPEVFDPAFRDALMRLQKGQTSQPVHSSFGWH 376 Query: 269 YIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + ++++ R++A + Sbjct: 377 LIQLLDTRQVDKTDAAQKERAYRLLFNRKFAEEAQTWMQEQRASAYVKI 425 >gi|261414929|ref|YP_003248612.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371385|gb|ACX74130.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327509|gb|ADL26710.1| peptidyl-prolyl cis-trans isomerase SurA [Fibrobacter succinogenes subsp. succinogenes S85] Length = 427 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 36/310 (11%), Positives = 91/310 (29%), Gaps = 19/310 (6%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK-----LQKINGELEKI 75 + + + + + + I ++G+ I + + + + ++ Sbjct: 6 IASLVFALSVGCFAEPVLMEGIAAVVDGKPIMRSEFMNNLYRFQDTPEAASMTEQQQKEA 65 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +I E + I++ I N V+ H ++ S + + L+K Sbjct: 66 VLNRMIEEKVLLSRIDRDSIVISENEVDQRVTSHLQSIAASQKIDMATLEKAVRAQLGLS 125 Query: 136 QYLAIQSIWPDV--------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + + + V+ + + E+ + K+ R++ + Sbjct: 126 MIQYREQLGKQIRSHMEISRVRQLHVGTIHPTKKEVDVFYKDYKDSLPRQFNCVLLSHIQ 185 Query: 188 PDNKLQNQGFVQKRIKDA--EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 K + + +S K ++ + G Y L P Sbjct: 186 LPIKPDSMIVDSVKHVAEALIDSLNLGIKFELLAQRHSQDSTAAKGGDLGYFKRGLLDPA 245 Query: 246 FQNLLKKSQNNT--TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 F+ +++ +N + P T G + +++ G A L K Sbjct: 246 FEKAIERLKNGHYASTPVKTDLGWHIARVLGRKEDGVRSA--QILLRTIPTAKDSAAVLA 303 Query: 304 YVKKLRSNAI 313 LR+N Sbjct: 304 LADSLRNNIK 313 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 8/163 (4%), Positives = 40/163 (24%), Gaps = 3/163 (1%) Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 ++ ++ + ++ +L + + + + Sbjct: 261 TPVKTDLGWHIARVLGRKEDGVRSAQILLRTIPTAKDSAAVLALADSLRNNIKSKDEFAK 320 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 + K + G + +++ + + + P + + D Sbjct: 321 AAKKFSEDKSSNFQGGLLGWFQRNEMEPAYVDPVANLNVGEISEPVMIDGAYHLFRLDDS 380 Query: 276 RDLGGEIALKA--YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 R + + + + + ++K R ++ Sbjct: 381 RQVRELTLEEDYGKIELMAATHLENEKLQKLIQKWRKEVLVEI 423 >gi|296101563|ref|YP_003611709.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056022|gb|ADF60760.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 623 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 45/396 (11%), Positives = 105/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + SY ++ +NG+ I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSSYLIGGGANY-AAKVNGQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 A + + L + + LI E L Q +K G+ V Sbjct: 60 AGERNRMQQQLGDQFSELAANEGYMKTLRQQTLNRLIDEALLDQYAKKLGLGISDEQVKK 119 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF--------- 152 N ++S +++ G+ + + Q L Q ++ Sbjct: 120 AIFSTQAFQSNGKFDNARYNSIVNQMGMTADQYAQALRNQLTTQQLINAVVGTDFMLKGE 179 Query: 153 ------------------------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K + E+ A ++ KN V R + Sbjct: 180 TDELAALVAQQRVVRQATIDVNALAAKQQVSDAEVNAWYEQNKNSFVAPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 LQ + ++ + Sbjct: 240 AAALQETATDAEIQSYYDQHQDQFTQPQRNRYSVIQTKTEADAKAVLDELNKGADFATVA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 + ++ I + G +L + + +N K + + + G + D Sbjct: 300 KAKSTDIISAKNGGDMGWLEAATTPDELKNAGLKDKGQLSGVIKSSVGFLVARLDDIEAA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KTKPLAEVRDDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|152990310|ref|YP_001356032.1| peptidyl-prolyl cis-trans isomerase [Nitratiruptor sp. SB155-2] gi|151422171|dbj|BAF69675.1| peptidyl-prolyl cis-trans isomerase [Nitratiruptor sp. SB155-2] Length = 272 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 41/300 (13%), Positives = 99/300 (33%), Gaps = 40/300 (13%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQE 79 ++ ++ + + AM++++ +NG IT DI+ ++ + + +++ ++++ + + Sbjct: 4 IVATGLMAVSLIATQAMAAKVLAKVNGHAITTEDIAPMLSQIGARFEQLPPQMKQQVIDK 63 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 I L K++ KSG+ + Sbjct: 64 AIERELLKEKALKSGVEKSKEFK------------------------------EALAKIK 93 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 +K + + E A QK + R L+ + K + Sbjct: 94 RDLALQIWMKKKYDS-IKVTDKEAKAFYQKNIDKFKRPELVHARHILVKSEKEAQDIINE 152 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--T 257 + + + + + + G + + + F + + T Sbjct: 153 LKKTPKNQLKQKF---IELAKTKSVGPSGKRGGDLGFFKKGQMVKPFSDAAFSLKPGTFT 209 Query: 258 TNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T P TQ G I + +K+ G +K + AQ K ++ + +KL+ +A I Sbjct: 210 TKPVQTQFGYHIIYVEEKKPAGTIPFDQIKDRIKAQLKMKKFQEIVQKEAEKLKKSAKIQ 269 >gi|261210559|ref|ZP_05924852.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio sp. RC341] gi|260840344|gb|EEX66915.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio sp. RC341] Length = 619 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 32/403 (7%), Positives = 97/403 (24%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y + + + I+ GD + Sbjct: 1 MMDRLREGVNSIAVKVILGLIILSFIFAGVGNYL-ISGGNNTAAKVGKAEISRGDFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q G+ V Sbjct: 60 QNERNRMQAQLGDYFSNLLADPTYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDQQVRQ 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 Q E + + L + G + F +YL + ++ Sbjct: 120 MILEMPQFQSQGQFDQELYQAALRRAGFTPDMFAEYLRKDLVRNQLMSALQGSEFSLPGE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 DF K + +I + R ++ + Sbjct: 180 VNLQDQLISQTRDIRTITLSLADFAKKVTLSDDDIQQYYKANTERFTRPEQMKVSYVELS 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 + L+ Q + +++ + + Sbjct: 240 ADALKKQIMIDDEAAQEYYQEHLDKYSTAEQRKVSHILVEGSDEQKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ + ++ G I + Sbjct: 300 ATVAKEKSQDVGSAQEGGSLGWIERDTMDPAFEAAAFALTENGQISGLVKSEFGYHIIRL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + + + + + + +L A Sbjct: 360 DEVKAPVVKPYSEVVEAIKQELIDQQALDTFYAKQSELEKLAF 402 >gi|260866602|ref|YP_003233004.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O111:H- str. 11128] gi|257762958|dbj|BAI34453.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O111:H- str. 11128] gi|323178290|gb|EFZ63868.1| PPIC-type PPIASE domain protein [Escherichia coli 1180] Length = 623 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSLYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKVVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|157159968|ref|YP_001457286.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli HS] gi|312970538|ref|ZP_07784719.1| PPIC-type PPIASE domain protein [Escherichia coli 1827-70] gi|157065648|gb|ABV04903.1| peptidylprolyl isomerase [Escherichia coli HS] gi|310337187|gb|EFQ02325.1| PPIC-type PPIASE domain protein [Escherichia coli 1827-70] Length = 623 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQKISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|171464151|ref|YP_001798264.1| SurA domain [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193689|gb|ACB44650.1| SurA domain [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 482 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 51/124 (41%), Gaps = 2/124 (1%) Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK- 252 +Q ++ ++ R R +K++ + G ++ DL P+F+ + + Sbjct: 346 DQDAERRLQGYRDQVRARTADFAELAKKYSEDGSAANGGDLGWMGPGDLVPEFEQAMNRL 405 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKKLRSN 311 +NP + G I + D+R+ + + A K+++ E+V++L N Sbjct: 406 QIGEVSNPVKIEFGWHLIQVIDRREGQLTVEKQRQFARAAIRERKLDQAYQEWVRELHDN 465 Query: 312 AIIH 315 A + Sbjct: 466 ATVK 469 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 89/309 (28%), Gaps = 31/309 (10%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIV-----------SYKSWAMSSRIRTTINGEVITDGDIS 57 ++ F K+ + + V S + +N +T +I Sbjct: 4 MNRFKKIRVHAIFIGLGLFVNASFAQDVAKTNAVSESKIRNIDGVAAVVNTGYVTRKEID 63 Query: 58 KRIALLKLQKIN----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 RIA LK Q G L K + LI+E ++ Q E+ GI + ++ + A Sbjct: 64 DRIATLKKQGAKLPEDGTLRKAILDRLILEKIQLQNAEQEGIRVTNKELDKYIGDIAAKN 123 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN- 172 LS + + ++ G ++Q L + + + K + EI + Sbjct: 124 KLSLAELKAKINAYGTSFERYRQMLRDNIMVSRYREREVEAKVKITDAEIDNFIIERTRG 183 Query: 173 -------------ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 E + +F D Q +K+ Sbjct: 184 AAPTGVQRSAPAAKGEPEEIDVAQIFIPVDAGAGVQVKAKKKADALLRDARGDVDFIQLG 243 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAICDKRD 277 A + + + Y L F + + + G + + D+R Sbjct: 244 AMAAKENPKIKFQELGYRTPDRLPQLFYEAVRNTGSGQVANAVVKSSAGYHVLKVLDRRA 303 Query: 278 LGGEIALKA 286 +G + Sbjct: 304 VGASPPPQQ 312 >gi|110804469|ref|YP_687989.1| peptidyl-prolyl cis-trans isomerase [Shigella flexneri 5 str. 8401] gi|110614017|gb|ABF02684.1| putative protease maturation protein [Shigella flexneri 5 str. 8401] Length = 623 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQIDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLV 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|46201262|ref|ZP_00208032.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Magnetospirillum magnetotacticum MS-1] Length = 273 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 32/286 (11%), Positives = 71/286 (24%), Gaps = 50/286 (17%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94 + + +NG I + A Q + ++ I L ++ ++ Sbjct: 23 PAFAADTVVANVNGSDIKMSQL----AEFGRQMGPQAPYEAVLEVAINNQLVYEQAKRDK 78 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 + D + IQ + +++ Sbjct: 79 LDADPEVKAAL------------------------------HRVEIQLMAQALMQKKVRG 108 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 ++ ++ E R +L ++ + R Sbjct: 109 AITEEAVKARYDQAVKNFQPQEEVHARHIL-----------VETEESARSIIADLNRGQD 157 Query: 215 DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTN-PYVTQKGVEYIA 271 + + G Y ++ + P+F + + P TQ G I Sbjct: 158 FGELAKSRSKDTGSGAMGGDLGYFVQGAMVPEFSTVAFAMRPGEVSKTPVKTQFGYHVIK 217 Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + DKR I ++ + + V LR A I + Sbjct: 218 VEDKRMAT--IPPYDQAKPVIARQIADELQEKMVVDLRDKAKIKRF 261 >gi|209545159|ref|YP_002277388.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gluconacetobacter diazotrophicus PAl 5] gi|209532836|gb|ACI52773.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gluconacetobacter diazotrophicus PAl 5] Length = 452 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 80/252 (31%), Gaps = 9/252 (3%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI-------NGELEKIAVQELIVETL 85 I I+G ++T D+ R L L L +++LI E L Sbjct: 48 QSDATSQDAIIAIIDGTLLTRRDVDNRGRLFALSAGLTLSDDVMARLRPQILRQLIDERL 107 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 ++ E+ I + + R G+ L + GI + +Q W Sbjct: 108 RQNEMLSRHINVSPDQIAASIADIERRNGMPKNALRDRLAQDGISLTTMIDQIRVQLGWS 167 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 V++ + + EI ++ +++ + + + +F D+ ++ + K + Sbjct: 168 QVLREEMGTRGRITAAEISQREEALRHEDGKPQYLISEIFIPVDDPRHSEDEL-KFTQTI 226 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQ 264 + +F+ + G ++ E L + +NP Sbjct: 227 IQELRNGAPFPIVAAQFSQNQAALEGGLMGWVQEDSLDPQVVEIAKAMPPGAISNPIRVA 286 Query: 265 KGVEYIAICDKR 276 G + +R Sbjct: 287 GGYVIATLNGRR 298 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 40/277 (14%), Positives = 81/277 (29%), Gaps = 21/277 (7%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 IT +IS+R L+ + + LI E + + D +Q Sbjct: 180 ITAAEISQREEALRHEDGKPQY-------LISEIFIPVDDPRHSE--DELKFTQTIIQEL 230 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK--NDFMLKYGNLEMEIPANKQ 168 RN + F Q + ++ S+ P VV+ + + + Sbjct: 231 RNGAPFPIVAAQFSQNQAALEGGLMGWVQEDSLDPQVVEIAKAMPPGAISNPIRVAGGYV 290 Query: 169 KMKNITVREYLIRT---------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 R + + Q Q+ + C +L Sbjct: 291 IATLNGRRVIGHQMGTLVSLREAFIPFTTPLDPQAPSEQQRDALKQAQQISTTVHSCPEL 350 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 E K D + ++ Q Q +L + ++P V G+ + +C ++ Sbjct: 351 EAINHKFGDKHPSNPGDVQLERVNEQMQKVLTGLTPGQASHPLVAPDGIAVLMVCSRQQK 410 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + ++ Q + E+ + + L AII Sbjct: 411 NFAQQTPSDIADQLMNERAEQTSRQLDRDLHRRAIIE 447 >gi|162149098|ref|YP_001603559.1| peptidyl-prolyl cis-trans isomerase SurA [Gluconacetobacter diazotrophicus PAl 5] gi|161787675|emb|CAP57271.1| Peptidyl-prolyl cis-trans isomerase SurA [Gluconacetobacter diazotrophicus PAl 5] Length = 459 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 80/252 (31%), Gaps = 9/252 (3%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI-------NGELEKIAVQELIVETL 85 I I+G ++T D+ R L L L +++LI E L Sbjct: 55 QSDATSQDAIIAIIDGTLLTRRDVDNRGRLFALSAGLTLSDDVMARLRPQILRQLIDERL 114 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 ++ E+ I + + R G+ L + GI + +Q W Sbjct: 115 RQNEMLSRHINVSPDQIAASIADIERRNGMPKNALRDRLAQDGISLTTMIDQIRVQLGWS 174 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 V++ + + EI ++ +++ + + + +F D+ ++ + K + Sbjct: 175 QVLREEMGTRGRITAAEISQREEALRHEDGKPQYLISEIFIPVDDPRHSEDEL-KFTQTI 233 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQ 264 + +F+ + G ++ E L + +NP Sbjct: 234 IQELRNGAPFPIVAAQFSQNQAALEGGLMGWVQEDSLDPQVVEIAKAMPPGAISNPIRVA 293 Query: 265 KGVEYIAICDKR 276 G + +R Sbjct: 294 GGYVIATLNGRR 305 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 40/277 (14%), Positives = 81/277 (29%), Gaps = 21/277 (7%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 IT +IS+R L+ + + LI E + + D +Q Sbjct: 187 ITAAEISQREEALRHEDGKPQY-------LISEIFIPVDDPRHSE--DELKFTQTIIQEL 237 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK--NDFMLKYGNLEMEIPANKQ 168 RN + F Q + ++ S+ P VV+ + + + Sbjct: 238 RNGAPFPIVAAQFSQNQAALEGGLMGWVQEDSLDPQVVEIAKAMPPGAISNPIRVAGGYV 297 Query: 169 KMKNITVREYLIRT---------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 R + + Q Q+ + C +L Sbjct: 298 IATLNGRRVIGHQMGTLVSLREAFIPFTTPLDPQAPSEQQRDALKQAQQISTTVHSCPEL 357 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 E K D + ++ Q Q +L + ++P V G+ + +C ++ Sbjct: 358 EAINHKFGDKHPSNPGDVQLERVNEQMQKVLTGLTPGQASHPLVAPDGIAVLMVCSRQQK 417 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + ++ Q + E+ + + L AII Sbjct: 418 NFAQQTPSDIADQLMNERAEQTSRQLDRDLHRRAIIE 454 >gi|308185912|ref|YP_003930043.1| peptidyl-prolyl cis-trans isomerase D [Pantoea vagans C9-1] gi|308056422|gb|ADO08594.1| peptidyl-prolyl cis-trans isomerase D [Pantoea vagans C9-1] Length = 622 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/396 (9%), Positives = 103/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + + +++ F + + +Y + +NG+ I+ G + + Sbjct: 1 MMDNLRAASNHVVLKIILGLIIVSFVLTGVGNYLIGGNNDY-AAKVNGQEISRGQLEQAF 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + ++ ++ + A+ +LI + L I++ ++ + V Sbjct: 60 NSERSRQQQMLGDQFSQLASNDGFMQQMRQQALSQLIDQALLDSYIKELHLSISDDQVKQ 119 Query: 105 FFVQHARNTGLSAEDFSSFLD---KQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 D + +L G + + + L Q ++ Sbjct: 120 AIFNQQAFQTNGKFDNAKYLALIGNMGFSADQYAEALRKQLSNQQLINAVANTDFTLKGE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 M K + EI Q+ K + R + Sbjct: 180 ASKLVDLVSQQRDIRQATLDVNALMAKQTVTDDEISQYYQQHKTSFMAPEQFRVSYILMD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AASMQQDASEADIQAWYDQHKADYSQPQRNRYSVIQTKTEADANAVLAQLKGGANFADVA 299 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 + + G +L S + +N + + + G + + D + Sbjct: 300 KAKSIDPISARKGGDMGWLEPSTTPDELKNAGLTEKGQMSGVIKSSVGFLVVRLDDIQPE 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + +++ ++A+ K + +K+ A Sbjct: 360 QVKPLDEVRSAVAAKVKQEKGVDAFYKLQQKVSEAA 395 >gi|323495052|ref|ZP_08100141.1| peptidyl-prolyl cis-trans isomerase D [Vibrio brasiliensis LMG 20546] gi|323310709|gb|EGA63884.1| peptidyl-prolyl cis-trans isomerase D [Vibrio brasiliensis LMG 20546] Length = 619 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 42/406 (10%), Positives = 100/406 (24%), Gaps = 92/406 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY ++ + I G+ + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYIVGGSNNS-AAKVGNVEIGRGEFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q E G+ + V Sbjct: 60 QNERNRMQAQLGDYFSNLLADPSYVESFRKSVLDRMVNDLLLEQHAESLGLRVSDSQVRT 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 ++ + E + + L + G F +YL + ++ Sbjct: 120 LILEMPQFQVDGKFDQEIYQTALRRAGFSAESFAEYLRRDLVRNQLMTAIQGSDFALPGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 DF K E EI Q+ R ++ Sbjct: 180 VEAQSKLLTQTRDIKKVTLSLADFAAKAELSEQEISDYYQQNPERYTRPEQVKVAYVELS 239 Query: 185 -FSIPDNKLQNQGFVQKRIKDAEES----------------------------RLRLPKD 215 + +N + +K ++ + Sbjct: 240 AQQLKENIEISDEQAEKYYQEHIDKYSSEEQRRVSHILIEGDDQAKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 E+ + G ++ + P F+ TT + G I + Sbjct: 300 ATLAEEKSDDFGSASEGGSLGWIERDVMDPSFEEAAFALTKVGETTGLVKSDFGYHIIKL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +D + A + + + E +L A Y Sbjct: 360 DELKDSVAKPYQEVAAEIKQELKDQQAIDQYYELQSELEKVAF-EY 404 >gi|295700292|ref|YP_003608185.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1002] gi|295439505|gb|ADG18674.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1002] Length = 265 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 78/296 (26%), Gaps = 36/296 (12%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELI 81 + ++ + + + + T+NG+ ++ D I Q + +L ELI Sbjct: 2 LALVIGATLSLATSATEKPFVTVNGKPVSQADADLYIGQAHAQGFSDSPQLTDHVRDELI 61 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + Q+ +K+G + + + + Sbjct: 62 RREVLFQQAQKTGFDRNPEVAARAEAARQKILAQAQATWEIE------------------ 103 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 I +++ + + +Y +R +L Sbjct: 104 -IVRAYMQDFLKKNPVSDDQLKAMYNDMKAKGGSTQYKVRHILVKDQGEAK--------- 153 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN- 259 D + + ++ + G ++ S + F + + T Sbjct: 154 --DIIAKLNKGASFGDLAKESIDADTRYNGGDLGWITSSKVVKPFADAVSHLHKGEYTRM 211 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 P T G I + D R L + + VK LR+ A I Sbjct: 212 PVKTGYGFHVIEVDDTRPLQV--PSFEDMKPMLYQQAQAELVDRMVKNLRAKATIQ 265 >gi|254240198|ref|ZP_04933520.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa 2192] gi|126193576|gb|EAZ57639.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa 2192] Length = 621 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 46/402 (11%), Positives = 112/402 (27%), Gaps = 89/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++++ + + S + +NG+ I+ ++ + + Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIIVLLSLTGFDAIIRATDHSNVAAKVNGDDISLNEVQQAV 60 Query: 61 ALLKLQ-------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q + L++ A++ LI TL Q + F ++ Sbjct: 61 DMQRRQLLQRLGKDFDPSMLDDKLLKEAALKGLIERTLLLQAAKDDKFAFSDQALDQLIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF------------ 152 + + +A+ F + + F+Q L + + + Sbjct: 121 QTPEFQVDGKFNADRFDQVIRQMNYSRMQFRQMLGQEMLIGQLRAGLAGTGFVTDNELQS 180 Query: 153 ---------------------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + E++ K + +T + ++ V Sbjct: 181 FARLEKQTRDFATLAIKADASKSSVSDDEVKAFYEGHKSEFMTPEQVVVEYVELKKSSFF 240 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKL-------------------------------- 219 Q + + ++ L + + Sbjct: 241 DQVKVKQEDLEALYQKEIANLSEQRDAAHILIEVNDKVGDEQAKAKIDEIKARLAKGEDF 300 Query: 220 ----EKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 ++F+ I + G Y P F+ Q + P T G I + Sbjct: 301 AALAKEFSQDIGSAATGGDLGYAGRGVYDPAFEEALYALKQGEVSAPVKTPYGYHLIKLL 360 Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ +LK L + +E+ E K L S+A Sbjct: 361 GVQAPEVPSLESLKPKLEDELKKQMVEQRFVEATKDLESSAY 402 >gi|170681699|ref|YP_001742585.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli SMS-3-5] gi|218698647|ref|YP_002406276.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli IAI39] gi|300937058|ref|ZP_07151924.1| PPIC-type PPIASE domain protein [Escherichia coli MS 21-1] gi|301022565|ref|ZP_07186437.1| PPIC-type PPIASE domain protein [Escherichia coli MS 69-1] gi|170519417|gb|ACB17595.1| peptidylprolyl isomerase [Escherichia coli SMS-3-5] gi|218368633|emb|CAR16372.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli IAI39] gi|284920251|emb|CBG33310.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli 042] gi|300397446|gb|EFJ80984.1| PPIC-type PPIASE domain protein [Escherichia coli MS 69-1] gi|300457889|gb|EFK21382.1| PPIC-type PPIASE domain protein [Escherichia coli MS 21-1] gi|323170528|gb|EFZ56178.1| PPIC-type PPIASE domain protein [Escherichia coli LT-68] gi|323965128|gb|EGB60587.1| ppic-type ppiase domain-containing protein [Escherichia coli M863] gi|327254769|gb|EGE66385.1| PPIC-type PPIASE domain protein [Escherichia coli STEC_7v] Length = 623 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDVAAKVKHEKALDAYYALQQKVSDAA 395 >gi|317401961|gb|EFV82563.1| parvulin-type peptidyl-prolyl cis-trans isomerase [Achromobacter xylosoxidans C54] Length = 258 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 98/305 (32%), Gaps = 52/305 (17%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELE 73 + +L C++ + ++ T+NG+ I + + + LL Q + +L Sbjct: 1 MKRIVMLAAACVIAVPAFAQN------VATVNGKAIPQKSLDQFVKLLVSQGATDSPQLR 54 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + QE+I + Q E GI ++ Sbjct: 55 EQVKQEMINRQVFVQAAEAGGIAKQADVQTEI---------------------------- 86 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 LA Q I + D++ K+ + ++ A +K+K + + + D K Sbjct: 87 ---ELARQGILVRALMADYLAKHPVSDAKVTAEYEKIKKEQAGKMEYKVRHILVEDEKTA 143 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 N Q + K + +K + G + ++ F + + Sbjct: 144 NDLLAQLKSNK--------GKFDDLAKKNSKDPGSAEKGGDLGWAPPTNYVQPFAQAVTQ 195 Query: 253 SQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + P TQ G I + D R + E + Q ++ A+Y K+LR Sbjct: 196 LKKGQLVDKPVQTQFGWHIIMVDDTRPV--EFPPLDQVRTQLEEMLRQQTLADYQKELRE 253 Query: 311 NAIIH 315 A I Sbjct: 254 KAKIQ 258 >gi|300820313|ref|ZP_07100465.1| PPIC-type PPIASE domain protein [Escherichia coli MS 119-7] gi|331666797|ref|ZP_08367671.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Escherichia coli TA271] gi|331676113|ref|ZP_08376825.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Escherichia coli H591] gi|300527098|gb|EFK48167.1| PPIC-type PPIASE domain protein [Escherichia coli MS 119-7] gi|331066021|gb|EGI37905.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Escherichia coli TA271] gi|331076171|gb|EGI47453.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Escherichia coli H591] Length = 623 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDVAAKVKHEKALDAYYALQQKVSDAA 395 >gi|169796158|ref|YP_001713951.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AYE] gi|260555208|ref|ZP_05827429.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii ATCC 19606] gi|169149085|emb|CAM86962.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AYE] gi|260411750|gb|EEX05047.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii ATCC 19606] Length = 441 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 104/314 (33%), Gaps = 20/314 (6%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIA----LLKLQK- 67 K L +F ++ S S+A + + ++ VI D+ + +A L+ QK Sbjct: 9 KHLKQFFKATTLAVLISSSMHSFAQPTDEVVAIVDNSVILKSDLEQGMAEAAHELQAQKK 68 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSS 122 L+ + +LI+ + ++++K GI D ++N ++ A +G Sbjct: 69 EVPPQQYLQFQVLDQLILRQAQLEQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQK 128 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + + +A + + M + + ++ + + Sbjct: 129 LDAIAPGTYENLRSRIAEDLAINRLRQQQVMSRIKISDQDVDNFLKSPQGQAALGNQAHV 188 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + I + Q V K ++ L N L+K ++ V + SD+ Sbjct: 189 IHMRISGDNPQEVQNVAKEVRSQLAQSNDL----NALKKLSTATVKVEGADMGFRPLSDI 244 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD----LGGEIALKAYLSAQNTPTKI 297 + + TT+ + GV + + +++ ++ Q + Sbjct: 245 PAELAARITPLQDGQTTDLISVRDGVHVLKLLERKQNEQKALVPQYQTRHILIQPSEVVS 304 Query: 298 EKHEAEYVKKLRSN 311 ++ + + + Sbjct: 305 PENAKQIIDSIYKR 318 Score = 88.2 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 17/157 (10%), Positives = 52/157 (33%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + ++K +T I +++ + ++ I + + Sbjct: 273 LKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENAKQIIDSIYKRLKAGEDFATLAATY 332 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 ++ G ++ + P+F + + + + P+ TQ G + + DKR+ Sbjct: 333 SNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHILQVTDKREKDM 392 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + +++++R+NA + Sbjct: 393 THEYQERMARQILGERQFNTEIDSWLREVRANAYVEI 429 >gi|15597002|ref|NP_250496.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa PAO1] gi|107101237|ref|ZP_01365155.1| hypothetical protein PaerPA_01002270 [Pseudomonas aeruginosa PACS2] gi|9947788|gb|AAG05194.1|AE004606_8 peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa PAO1] Length = 621 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 46/402 (11%), Positives = 112/402 (27%), Gaps = 89/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++++ + + S + +NG+ I+ ++ + + Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIIVLLSLTGFDAIIRATDHSNVAAKVNGDDISLNEVQQAV 60 Query: 61 ALLKLQ-------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q + L++ A++ LI TL Q + F ++ Sbjct: 61 DMQRRQLLQRLGKDFDPSMLDDKLLKEAALKGLIERTLLLQAAKDDKFAFSDQALDQLIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF------------ 152 + + +A+ F + + F+Q L + + + Sbjct: 121 QTPEFQVDGKFNADRFDQVIRQMNYSRMQFRQMLGQEMLIGQLRAGLAGTGFVTDNELQS 180 Query: 153 ---------------------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + E++ K + +T + ++ V Sbjct: 181 FARLEKQTRDFATLAIKADASKSSVSDDEVKAFYEGHKSEFMTPEQVVVEYVELKKSSFF 240 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKL-------------------------------- 219 Q + + ++ L + + Sbjct: 241 DQVKVKQEDLEALYQKEIANLSEQRDAAHILIEVNDKVGDEQAKAKIDEIKARLAKGEDF 300 Query: 220 ----EKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 ++F+ I + G Y P F+ Q + P T G I + Sbjct: 301 AALAKEFSQDIGSAATGGDLGYAGRGVYDPAFEEALYALKQGEVSAPVKTPYGYHLIKLL 360 Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ +LK L + +E+ E K L S+A Sbjct: 361 GVQAPEVPSLESLKPKLEDELKKQMVEQRFVEATKDLESSAY 402 >gi|323137132|ref|ZP_08072211.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylocystis sp. ATCC 49242] gi|322397490|gb|EFY00013.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylocystis sp. ATCC 49242] Length = 297 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 85/280 (30%), Gaps = 49/280 (17%) Query: 41 RIRTTINGEVITDGDISKRIALL----KLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 ++ +NG ITD D+ + L Q + + L+ E L Q+ + + Sbjct: 34 KVLAKVNGVEITDDDLKLAMEDLGPGIPRQLEGKARDAYVLDFLVDEQLVVQKAQADKLA 93 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 YL +++ ++ N Sbjct: 94 ETPEFAKKL------------------------------AYLRDKALMETLLGNVAKQAA 123 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 ++ ++ EY +L ++ + R++ +D Sbjct: 124 TEAAIKQTYDEAAKNQKPETEYHAHHILVGSEEDAKKALA------------RVKGGEDF 171 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 K+ SK G + + + P+F + K ++P TQ G I + +K Sbjct: 172 AKVVAEVSKDSGPKNGDLGWFTKDRMVPEFADAAAKLEPGQISDPVKTQFGWHIIKLDEK 231 Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 R + Q ++K +++ V KLR A I Sbjct: 232 RPKAF--PPLDQVKDQVARYVVQKAQSDLVVKLREAAKIE 269 >gi|88704591|ref|ZP_01102304.1| Chaperone surA [Congregibacter litoralis KT71] gi|88700912|gb|EAQ98018.1| Chaperone surA [Congregibacter litoralis KT71] Length = 400 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 98/263 (37%), Gaps = 7/263 (2%) Query: 56 ISKRIALLKLQKINGE-LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 +++ IA + + L + + LI+E ++ Q ++ G+ +N + A G Sbjct: 26 VNQNIAAQGAEAPPEDVLIRETLDRLILENIQIQMGQRFGVRISDAQLNQAMGRIAAQNG 85 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 L+ E F+ L+++G ++ + + I V + + + EI + Sbjct: 86 LTQEQFAVLLEQEGRSYMEIRENIEREMIIQRVQQGNVNQLIEISDQEIENYLSTEEGQK 145 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH--DVSIG 232 + + R + +P + + ++K +E R+ + S + G Sbjct: 146 LVQPEYRIIHALLPISSDTSDAEIEKNRTFSEGLVERIRDGESFEAVMTSVPQEYAFTGG 205 Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYL 288 + +DL FQ + S+ T + + + G+ + + D+R D+ ++ Sbjct: 206 DLGWRKLADLPSLFQEVAPTLSRGETADVFQSPSGLHIVTMADQRGGGDMTINQTKVRHI 265 Query: 289 SAQNTPTKIEKHEAEYVKKLRSN 311 + + + + +LR Sbjct: 266 LIEPSEILTDDQARDLAAELRER 288 Score = 90.1 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 49/141 (34%), Gaps = 3/141 (2%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 + I +++ + + E + +++ I G + Sbjct: 259 QTKVRHILIEPSEILTDDQARDLAAELRERVEAGEDFGDLAREYSEDIGSAAEGGDLGWT 318 Query: 238 LESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPT 295 + P+F+N++ + P +Q G + + ++R+ + KA + Sbjct: 319 SPGQMVPEFENMMASTEVGVVSPPVRSQFGWHILEVLERREKDITEDMRKAQVREFLHGR 378 Query: 296 KIEKHEAEYVKKLRSNAIIHY 316 K ++ +++K+R A + Sbjct: 379 KYQEELDAWLRKIRDEAFVDI 399 >gi|124267144|ref|YP_001021148.1| putative peptidyl-prolyl cis-trans isomerase transmembrane protein [Methylibium petroleiphilum PM1] gi|124259919|gb|ABM94913.1| putative peptidyl-prolyl cis-trans isomerase transmembrane protein [Methylibium petroleiphilum PM1] Length = 640 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 45/401 (11%), Positives = 102/401 (25%), Gaps = 99/401 (24%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--- 57 M V + ++ + V F + Y + + + + G IT + Sbjct: 1 MFEFVRSHTR-LLQFILVLLVFPAFVFFGVQGYTGMSEGNAVVAKVAGTSITQAEWDAAH 59 Query: 58 -KRIALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF-- 106 ++ L+ Q E ++ + L+ E + +K +T + F Sbjct: 60 RNQVERLRAQSPGVDLKLFDTPEAKQRTLDALVRERVMLVAADKLHLTASDERLQRVFAS 119 Query: 107 -VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK---------------- 149 Q A + L QG+ F+Q L V++ Sbjct: 120 DPQLAFLRKPDGSLNADVLAAQGMSARQFEQQLRQDLAMRQVLQGVSGTVLAPSRPTSTA 179 Query: 150 -----------------NDFMLKYGNLEMEIPANKQKMKN-------------------- 172 F+ K + +I A + ++ Sbjct: 180 LDALLQQREVRIARFEAQKFVTKVNVTDADIEAYYKDGRHAAEFETPEQASIEYLVLDLD 239 Query: 173 -----------ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL--------- 212 + Y + P+ + + ++ + E R + Sbjct: 240 AIKSGLTVSDDDLRKYYAENESRYVAPEERRASHILIKAEKGASAEQREKARTKAATLLA 299 Query: 213 ------PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 K +K + V G + + F++ + + Sbjct: 300 EARKDPAKFAELAKKNSEDPGSAVQGGDLDFFARGAMVKPFEDAAFALKPGQLSEVVESD 359 Query: 265 KGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAE 303 G I + R + ++KA + + ++ AE Sbjct: 360 FGYHVILLTAVRGGEKKAFESVKAEIENEVKQQLAQRRYAE 400 >gi|297545519|ref|YP_003677821.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843294|gb|ADH61810.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 301 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 89/305 (29%), Gaps = 16/305 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-KINGELEK 74 + LI+ + S + + T+NGE IT+ + K +K Q + + + K Sbjct: 1 MKRKIALILSFGFIVFLLVSCSAKKEVVATVNGENITNAEYRKAFDQVKAQIESSPQYTK 60 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + ++++ + N +S ++ ++ + Sbjct: 61 DIWNQDYEGKKFLDVVKENVLDSLIAQKLLLQEALKNNITVSDKEIEEEYQREKEFNKDI 120 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + + + + ++ E E+ + K+ ++ Sbjct: 121 TKEDVKNYLLINKLFEEYTKDVKITEEELKKYYEDNKDQFETVKASHILVSD-------- 172 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K +D ++ ++++ G + P+F+ + Sbjct: 173 ----EKIAQDIYNRLMKGEDFATLAKEYSIDTATKDQGGDLGEFARGVMVPEFEQVAFSL 228 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + P T G I + L +K + A K + E L A Sbjct: 229 KKGQISKPVKTDYGYHIIK-SEGATLKSFDEVKGDIEAYLLNDKKNQVITEKYDALEKAA 287 Query: 313 IIHYY 317 I + Sbjct: 288 KIQKF 292 >gi|330883238|gb|EGH17387.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv. glycinea str. race 4] Length = 192 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 53/149 (35%), Gaps = 3/149 (2%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + I ++++N+ ++ + + + F+ + Sbjct: 34 QGQAQMRDEVHVRHILIKPSEIRNEEETKRLAEKIYDRIQNGEDFAELAKSFSEDPGSAL 93 Query: 230 SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAY 287 + G ++ + L P+F+ + + Q + P+ T G + + +R + A + Sbjct: 94 NGGDLNWVDPNSLVPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQ 153 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ +++++R A + Sbjct: 154 ALNVLRNRKYDEELQTWLRQIRDEAYVEI 182 Score = 44.7 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 9/67 (13%), Positives = 22/67 (32%), Gaps = 5/67 (7%) Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAEYVK 306 + T P T G + + +KR G + ++ + + + E+ + Sbjct: 7 MPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRNEEETKRLAE 66 Query: 307 KLRSNAI 313 K+ Sbjct: 67 KIYDRIQ 73 >gi|254476481|ref|ZP_05089867.1| ppic-type ppiase domain protein [Ruegeria sp. R11] gi|214030724|gb|EEB71559.1| ppic-type ppiase domain protein [Ruegeria sp. R11] Length = 421 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 95/254 (37%), Gaps = 6/254 (2%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEI 90 + S T+N V+T+ ++ +R L L + G+ + A ++LI + LK + + Sbjct: 36 PAVGSAQGLFSPAVTVNDSVVTNYELQQRARFLALLREPGDPLEKAREDLIEDRLKLEVL 95 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 ++GI V + A LS ++F + L + G+ + + + W V + Sbjct: 96 AQAGIDPTDEEVTAGMTELAGRANLSLQEFLNVLRENGVDPQTLRDFSRVGIAWRGYVGS 155 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 ++ + E EI + V L ++ N Q + Q+ Sbjct: 156 RYIGQARPSEEEIDRAMGLSGSGGVEVLLSELIMPINAQNAPQVEEVAQQ-----VAQMN 210 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEY 269 +F++ + G+ ++ ++L PQ Q ++ + S T P V Sbjct: 211 TTAAFSQAATQFSAARTRENGGRLPWMPLTNLPPQLQQVVLELSPGEVTAPIPLDNAVAL 270 Query: 270 IAICDKRDLGGEIA 283 + D R+ G Sbjct: 271 FQMRDLRESAGSAP 284 Score = 37.7 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 28/81 (34%), Gaps = 3/81 (3%) Query: 239 ESDLHPQFQNL-LKKSQNNTTNPYVTQKG--VEYIAICDKRDLGGEIALKAYLSAQNTPT 295 S++ K T+ G + + +C + A + ++ T Sbjct: 340 PSEIPQDIAIELAKLDPGETSTALTRNNGQTLVVLMMCGRTAEVNAEASREAVANALTQQ 399 Query: 296 KIEKHEAEYVKKLRSNAIIHY 316 ++ +++L+++A I Sbjct: 400 RLGAFADSLLEQLKADARIDI 420 >gi|212696153|ref|ZP_03304281.1| hypothetical protein ANHYDRO_00689 [Anaerococcus hydrogenalis DSM 7454] gi|212676782|gb|EEB36389.1| hypothetical protein ANHYDRO_00689 [Anaerococcus hydrogenalis DSM 7454] Length = 345 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 41/323 (12%), Positives = 98/323 (30%), Gaps = 42/323 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSR-------------------IRTTINGEVITDG 54 K + + F + + + + + GE I+ Sbjct: 3 KKIIALVLATSFLFSACANDNAKDKNDKGSNETQTSESAKKEDLPKDAVAVVGGEKISKE 62 Query: 55 DISKRIALLKL-QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 ++ +L+ VQ LI + L +++K+ + D +N F+Q+ + Sbjct: 63 SYKDEMSFYSAMLASQQQLKPSIVQMLIQDKLIADDMKKNDVKVDDKELNDKFLQYIQQF 122 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 G + D D + Q + F K + +I + K+ Sbjct: 123 GGQEKFDKMLEDYNMSSDKFKETIKKDQIYQKH--REWFEKKNPVSDKDIKKYYDEHKDT 180 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIG 232 + ++ + K+ ++ ++++ + G Sbjct: 181 LSQVKASHILV------------EDENTAKEVKKKLDDGEDFAKLAKEYSKDTANSAKGG 228 Query: 233 KAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 Y + + +F + + ++P T G I + DK+D L + Sbjct: 229 DLGYFTKDKMVKEFADKAFAMKKGEISDPVKTSYGYHIIKVEDKKDNP------DALKEE 282 Query: 292 NTPTKIEKHEAEYVKKLRSNAII 314 + +K A+Y+ L + A + Sbjct: 283 ISKALNDKKYADYLTDLFNKANV 305 >gi|116049755|ref|YP_791438.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa UCBPP-PA14] gi|313110502|ref|ZP_07796387.1| putative peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa 39016] gi|115584976|gb|ABJ10991.1| putative peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa UCBPP-PA14] gi|310882889|gb|EFQ41483.1| putative peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa 39016] Length = 621 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 46/402 (11%), Positives = 111/402 (27%), Gaps = 89/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++++ + + S + +NG+ I+ ++ + + Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIIVLLSLTGFDAIIRATDHSNVAAKVNGDDISLNEVQQAV 60 Query: 61 ALLKLQ-------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q + L++ A++ LI TL Q + F ++ Sbjct: 61 DMQRRQLLQRLGKDFDPSMLDDKLLKEAALKGLIERTLLLQAAKDDKFAFSDQALDQLIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF------------ 152 + + +A+ F + + F+Q L + + + Sbjct: 121 QTPEFQVDGKFNADRFDQVIRQMNYSRMQFRQMLGQEMLIGQLRAGLAGTGFVTDNELQS 180 Query: 153 ---------------------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 E++ K + +T + ++ V Sbjct: 181 FARLEKQTRDFATLAIKADASKSSVSEDEVKAFYEGHKSEFMTPEQVVVEYVELKKSSFF 240 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKL-------------------------------- 219 Q + + ++ L + + Sbjct: 241 DQVKVKQEDLEALYQKEIANLSEQRDAAHILIEVNDKVGDEQAKAKIDEIKARLAKGEDF 300 Query: 220 ----EKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 ++F+ I + G Y P F+ Q + P T G I + Sbjct: 301 AALAKEFSQDIGSAATGGDLGYAGRGVYDPAFEEALYALKQGEVSAPVKTPYGYHLIKLL 360 Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ +LK L + +E+ E K L S+A Sbjct: 361 GVQAPEVPSLESLKPKLEDELKKQMVEQRFVEATKDLESSAY 402 >gi|149181601|ref|ZP_01860095.1| post-translocation molecular chaperone [Bacillus sp. SG-1] gi|148850715|gb|EDL64871.1| post-translocation molecular chaperone [Bacillus sp. SG-1] Length = 313 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 25/294 (8%), Positives = 86/294 (29%), Gaps = 26/294 (8%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + ++ +V ++ + + + I+ ++ + + + Sbjct: 29 IKLLTLIGSVVVVCLIITGFVFSKDEVVAKVGKDSISKDELYTMLV--------DQYGEA 80 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A+ LI + + + E ++ I + + + G + Sbjct: 81 ALDTLIADKIVELESDEQKIKVTDGEIEEELHKLHESYGDEEAFNQALTSS-----GTSL 135 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 Q + + K + + ++ + K+ ++ + + + + Sbjct: 136 QSVKDNIHSYLLTKKLLQDRVSITDDQVQEYFETNKDSFAQQEQVEASHILVENEETAK- 194 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-LKKS 253 + +E E+++ + S G+ Y + ++ +F+ Sbjct: 195 --------EVKEMLDNGEDFAQLAEEYSVDTSNAGSGGELGYFAKGEMVAEFEEKAFSME 246 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYV 305 +NP T+ G I + DK++ K + ++ ++ Sbjct: 247 IEEISNPIETEFGFHIIKVTDKKEAEEAVLEDHKEEIQEILYEQALQTEYPVWL 300 >gi|323976074|gb|EGB71167.1| ppic-type ppiase domain-containing protein [Escherichia coli TW10509] Length = 623 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDVAAKVKHEKALDAYYALQQKVSDAA 395 >gi|291281348|ref|YP_003498166.1| Peptidylprolyl isomerase [Escherichia coli O55:H7 str. CB9615] gi|209743820|gb|ACI70217.1| putative protease maturation protein [Escherichia coli] gi|290761221|gb|ADD55182.1| Peptidylprolyl isomerase [Escherichia coli O55:H7 str. CB9615] gi|320661211|gb|EFX28642.1| periplasmic folding chaperone [Escherichia coli O55:H7 str. USDA 5905] Length = 623 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 42/396 (10%), Positives = 106/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVRE----------- 177 + + + E EI + ++ KN + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 178 ---------------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220 Y + + + K +A+ L K + Sbjct: 240 AATMQQPVSDADLQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 221 --KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 K A I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDVAAKVKHEKALDAYYALQQKVSDAA 395 >gi|192361586|ref|YP_001982980.1| peptidyl-prolyl cis-trans isomerase D [Cellvibrio japonicus Ueda107] gi|190687751|gb|ACE85429.1| peptidyl-prolyl cis-trans isomerase D [Cellvibrio japonicus Ueda107] Length = 270 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 26/298 (8%), Positives = 81/298 (27%), Gaps = 37/298 (12%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + C+ ++ S + S ++NG+ I+ + + + ++ + + Sbjct: 1 MKKLLLTSACCLAALLMGCSDSGS---IASVNGKGISQEEFNAYLKFKRIPEQDKARVDR 57 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A+ E + IEK+G Sbjct: 58 ALDEYVNRAALAAAIEKTG------------------------------KLDAAVIQAEL 87 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + + + + + + + + R + ++ P + Sbjct: 88 EEFKRQMLIGRYFEEHLNGVVDDAAVRNYYAEHQGQYESSRVHAAHILVRIDPTMGETER 147 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF-QNLLKKS 253 + + + + ++ + G +L E + P+F + L Sbjct: 148 QAKLSTAHEIYSRLQKGEDFADLAKSYSEDKVSGEKGGDLGWLAEGAVDPEFSKKLFSMK 207 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + P +T G + + + +++ + Q V ++ Sbjct: 208 PGEISEPLITPFGFHVVKMLEGPQTIKRSLESVEGEIRYQLRNQAKATETERLVNTVK 265 >gi|284122311|ref|ZP_06386843.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Poribacteria sp. WGA-A3] gi|283829362|gb|EFC33756.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Poribacteria sp. WGA-A3] Length = 186 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 24/180 (13%), Positives = 58/180 (32%), Gaps = 3/180 (1%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + V + +I A ++ + + + + +N ++ Sbjct: 1 EEMMVRRVRDMETRRGLFVSPEDIRAYYKEQQPLFTSPHAHHIRQILLLPKLGENMETLK 60 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNNTT 258 R + E F+ V G ++ +++ L P L K S T Sbjct: 61 ARAEILMSQLDEGRTFEQLAELFSDGSESVMGGDLGFVTKNELLPPLRDALHKISPGEVT 120 Query: 259 NPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 T+ G+ + + + R +K + ++ K++K ++ L+ A I Sbjct: 121 PLIETEIGIHILRLEESRPGVTEPFEKVKDAIESRLYQEKLQKSHDAWMSSLKDKAYIEI 180 >gi|168188090|ref|ZP_02622725.1| peptidil-prolyl cis-trans isomerase [Clostridium botulinum C str. Eklund] gi|169294073|gb|EDS76206.1| peptidil-prolyl cis-trans isomerase [Clostridium botulinum C str. Eklund] Length = 247 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 32/285 (11%), Positives = 86/285 (30%), Gaps = 47/285 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQELIVETLKKQEIEKS 93 M +++ T+NG+ IT+ DI I ++ + +K +++LI + ++ Sbjct: 1 MENKVLATVNGKQITENDIQAAIKRFPQEQQAYLATEQGKKQLLEQLISFEVFYDYGKEM 60 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + + + N + Sbjct: 61 EYDKTKEYTTAI-------------------------------EIMERDALTQLSVNKVI 89 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + + E+ K+ V +I + + + K + + ++ + Sbjct: 90 SQVELTDKEVEDYYNANKDNFVVGEMISAKHILV------DTEELAKEVTEEIKNGMTFS 143 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 + K+++ G + + P+F+ + P TQ G I + Sbjct: 144 ---DAATKYSTCPSKAQGGNLGKFGKGQMVPEFEEAAFNLEIGKISEPVKTQFGYHLIEV 200 Query: 273 CDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 DK++ ++ + + + A V++L+ + Sbjct: 201 EDKQEATKKSFDEVRDLIRTNLLQERQKVKYATTVEELKKKYNVE 245 >gi|83950728|ref|ZP_00959461.1| PPIC-type PPIASE domain protein [Roseovarius nubinhibens ISM] gi|83838627|gb|EAP77923.1| PPIC-type PPIASE domain protein [Roseovarius nubinhibens ISM] Length = 286 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 32/281 (11%), Positives = 76/281 (27%), Gaps = 50/281 (17%) Query: 38 MSSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94 + + T++G IT G + + Q L K + +LI + + + Sbjct: 31 NADTVVATVDGNEITLGHMIVLRAGLPAQLSQLPPAVLYKGILDQLIQQAIME------- 83 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 ++F + + I + + + Sbjct: 84 --------------------------NNFEGELSKAAKLSLENERRALIAGETINRVANV 117 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + ++ M E+ +L ++ K E Sbjct: 118 ALTDEALQKVYEDTYMTAEAQTEFNAAHIL-----------VETEEEAKALIEELNGGAD 166 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAIC 273 ++ ++ + G+ + + F + + K + + P TQ G I + Sbjct: 167 FSALAKEKSTGPSGPNGGELDWFAGDMMVEPFAEAVAKMEKGAISEPVQTQFGWHVIKLN 226 Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 D R E + A+ ++ Y+ L A + Sbjct: 227 DTR--TKERPELEEVRAELEEVVRQQAIDAYMTDLSEGAKV 265 >gi|271499601|ref|YP_003332626.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dickeya dadantii Ech586] gi|270343156|gb|ACZ75921.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dickeya dadantii Ech586] Length = 626 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 33/395 (8%), Positives = 104/395 (26%), Gaps = 87/395 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + ++ F + + Y +NG+ IT + + + Sbjct: 1 MMDNLRAAANNVVLKVILALIIGSFVLTGVGDYLIRGSGDY-AAKVNGQEITRSQLEQGV 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + ++ +L K + +LI ETL Q G+ + Sbjct: 60 QNERNRQQEMLGDNFSALAANEGYMQQLRKQVLSQLIDETLVVQYAHTLGLNISDEQIKQ 119 Query: 105 FFV---QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + N + + + + + G+ + + Q+L Q + +++ Sbjct: 120 AIFSVPEFQTNNRFDNDKYLAQVRQMGLTPDAYAQFLRKQLLTQQLIRGLGSTDFVLQQE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + E+ + K+ + + + Sbjct: 180 LDNLVAMAAQDRTIRTATLDLGVRARSQTVSDDEVKNFYDQNKSRYLAPEQFKVSYIMLD 239 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA------------------------- 223 + ++ V A + + + +K++ Sbjct: 240 AASIMDKTKVDNNDIAAYYEQHKGEFTQPERKKYSVIQLKTEADAKVVLDQLKKGADFAA 299 Query: 224 -------SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 + + G ++ + + + K + ++ + G I + D + Sbjct: 300 LAKEKSTDIVSRRNGGDLGWMDDGSTVDEIKQAGLKQKGQLSDVIKSSVGYLIIRLDDIQ 359 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + A + + L+ Sbjct: 360 AQRVK--ALDEVRADLAEKVKREKSLDAFYALQQK 392 >gi|239502210|ref|ZP_04661520.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB900] Length = 436 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 105/314 (33%), Gaps = 20/314 (6%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIA----LLKLQK- 67 K L +F ++ S S+A + + ++ VI D+ + +A L+ QK Sbjct: 4 KHLKQFFKATTLAVLISSSMHSFAQPTDEVVAIVDNSVILKSDLEQGMAEAAHELQAQKK 63 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSS 122 L+ + +LI+ + ++++K GI D ++N ++ A +G Sbjct: 64 EVPPQQYLQFQVLDQLILRQAQLEQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQK 123 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 F + + +A + + M + + ++ + + Sbjct: 124 FDAIAPGTYENLRSRIAEDLAINRLRQQQVMSRIKISDQDVDNFLKSPQGQAALGNQAHV 183 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + I + Q V K ++ L N L+K ++ V + SD+ Sbjct: 184 IHMRISGDNPQEVQNVAKEVRSQLAQNNDL----NALKKLSTATVKVEGADMGFRPLSDI 239 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD----LGGEIALKAYLSAQNTPTKI 297 + + TT+ + GV + + +++ ++ Q + Sbjct: 240 PAELAARITPLQDGQTTDLISVRDGVHVLKLLERKQNEQKALVPQYQTRHILIQPSEVVS 299 Query: 298 EKHEAEYVKKLRSN 311 ++ + + + Sbjct: 300 PENAKQIIDSIYKR 313 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 17/157 (10%), Positives = 52/157 (33%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + ++K +T I +++ + ++ I + + Sbjct: 268 LKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENAKQIIDSIYKRLKAGEDFATLAATY 327 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 ++ G ++ + P+F + + + + P+ TQ G + + DKR+ Sbjct: 328 SNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHILQVTDKREKDM 387 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + +++++R+NA + Sbjct: 388 THEYQERMARQILGERQFNTEIDSWLREVRANAYVEI 424 >gi|259419301|ref|ZP_05743218.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Silicibacter sp. TrichCH4B] gi|259345523|gb|EEW57377.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Silicibacter sp. TrichCH4B] Length = 425 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 108/272 (39%), Gaps = 8/272 (2%) Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-KINGELEKIAV 77 L + +P + + S + T+N +VIT ++ +R L + + G+ + A Sbjct: 26 GLALAVALTLPAADVGAQGLFSPVI-TVNEDVITTYELQQRARFLTVLGSVQGDPLETAR 84 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 +LI + LK+Q + + G+T + + + A+ LS E+F S L + G+ + + Sbjct: 85 NDLIEDRLKRQVMREVGLTLSEDEITEGMRELAQRANLSLEEFLSGLRQAGVDPETVRDF 144 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 + W + ++ F+ + E EI +V+ L +L +N Q Q Sbjct: 145 TSAGLGWREYIRGRFLAQARPSEAEIDRAMGTAGTGSVQVLLSEIILPLTQENAAQIQEL 204 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256 + + E +F++ + G+ ++ S L PQ Q ++ Sbjct: 205 ATQISELKNE-----AAFTASAAQFSASDSSANGGRLPWMSLSRLPPQLQEVVLGLEPGQ 259 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 T P Q + + R++ G A A + Sbjct: 260 ITQPLPMQGAIAIFRMRGLREVDGRSASFAAI 291 Score = 39.7 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 10/87 (11%), Positives = 32/87 (36%), Gaps = 5/87 (5%) Query: 235 QYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKG--VEYIAICDKRD--LGGEIALKAYLS 289 D+ L + N ++ G + ++ +C + + + +A ++ Sbjct: 338 GSKAPKDIPQDIALELARLDANESSATLTRDNGQTLLFVMLCGRTSELVAAQENARASVA 397 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ +V++L+++A I Sbjct: 398 NALVQQRLNDLAESHVEQLKADARIEI 424 >gi|255528699|ref|ZP_05395439.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium carboxidivorans P7] gi|296188773|ref|ZP_06857156.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Clostridium carboxidivorans P7] gi|255507609|gb|EET84109.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium carboxidivorans P7] gi|296046636|gb|EFG86087.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Clostridium carboxidivorans P7] Length = 248 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 30/280 (10%), Positives = 76/280 (27%), Gaps = 39/280 (13%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 +++ +NG+ IT D+ I ++ + ++L+ E + + I + Sbjct: 3 NKVLAVVNGKEITQVDLDSTIKRFPNERQGYLQTEAGKKQLLEEIISFELIYNYAKDNNM 62 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + + + + + + M + Sbjct: 63 ENDSDYI--------------------------AQLEMAKKEILTQTAI-AKVMQQVSVE 95 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + E+ K + +++ K+ E + Sbjct: 96 DKEVEDYYNANKENFKEPETVSAKHIL---------VESEEKAKEVAEEINAGTTFEDAA 146 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD- 277 +K++S G + P+F+ + P TQ G I + DK Sbjct: 147 KKYSSCPSKEQGGNLGKFGRGQMVPEFEEAAFALEIGTLSAPVKTQFGYHLIKVEDKSKG 206 Query: 278 -LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +K + + + + K+LR + Sbjct: 207 AVKSFEEVKNSIKNKLLQERQSFKYTQLNKELRQKYDVQI 246 >gi|126701124|ref|YP_001090021.1| putative foldase lipoprotein [Clostridium difficile 630] gi|254977125|ref|ZP_05273597.1| putative foldase lipoprotein (late stage protein export lipoprotein) [Clostridium difficile QCD-66c26] gi|255094454|ref|ZP_05323932.1| putative foldase lipoprotein (late stage protein export lipoprotein) [Clostridium difficile CIP 107932] gi|255102710|ref|ZP_05331687.1| putative foldase lipoprotein (late stage protein export lipoprotein) [Clostridium difficile QCD-63q42] gi|255308531|ref|ZP_05352702.1| putative foldase lipoprotein (late stage protein export lipoprotein) [Clostridium difficile ATCC 43255] gi|255316205|ref|ZP_05357788.1| putative foldase lipoprotein (late stage protein export lipoprotein) [Clostridium difficile QCD-76w55] gi|255518867|ref|ZP_05386543.1| putative foldase lipoprotein (late stage protein export lipoprotein) [Clostridium difficile QCD-97b34] gi|255652046|ref|ZP_05398948.1| putative foldase lipoprotein (late stage protein export lipoprotein) [Clostridium difficile QCD-37x79] gi|306521784|ref|ZP_07408131.1| putative foldase lipoprotein (late stage protein export lipoprotein) [Clostridium difficile QCD-32g58] gi|115252561|emb|CAJ70404.1| Peptidylprolyl isomerase PrsA-like [Clostridium difficile] Length = 331 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 39/326 (11%), Positives = 97/326 (29%), Gaps = 32/326 (9%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI------- 68 + L+I I+ + + T+ G I+ + K IAL K Sbjct: 1 MKKVITLVIAMILVVSVTACSSSKGETVATVEGTKISSDEFKKTIALYKDSMEQTYGKDI 60 Query: 69 -----------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 + + + + +LI + + +K + V F + G Sbjct: 61 WDKEVEKGVKYKDKFKDLILDQLITTEVIYSQAKKDNLLPKKEDVEKSFKELKDAMGKDE 120 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 + + Q + +++F K + E+ K+ ++ Sbjct: 121 KYKEQLKKLGIDDEFLRDQQEKD--LAMQNYQSNFAKKTKISDEEMKKYYDTHKDEFKKD 178 Query: 178 YLIRTVLFSIPDNKLQNQ------GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 + + + + +K+ ++A + +K++ Sbjct: 179 EVEASHILLKTVDDNNKPLSDKEKAEAKKKAEEALKEVKSGEDFAKVAKKYSQDTSASDG 238 Query: 232 GKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK-RDLGGEIALKAYLS 289 GK + + +F++ + ++ TQ G I + D+ + K + Sbjct: 239 GKLGFFSRGQMVAEFEDAAFSMKKGEVSDLVETQYGYHIIKVTDRINEQTSFEDAKETIK 298 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIH 315 Q K ++ ++KL A + Sbjct: 299 DQLLKNKYQEQ----IEKLTKEAKVE 320 >gi|15800171|ref|NP_286183.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli O157:H7 EDL933] gi|15829749|ref|NP_308522.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli O157:H7 str. Sakai] gi|168747883|ref|ZP_02772905.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4113] gi|168754546|ref|ZP_02779553.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4401] gi|168760404|ref|ZP_02785411.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4501] gi|168768396|ref|ZP_02793403.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4486] gi|168777137|ref|ZP_02802144.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4196] gi|168778934|ref|ZP_02803941.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4076] gi|168786292|ref|ZP_02811299.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC869] gi|168798005|ref|ZP_02823012.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC508] gi|208809217|ref|ZP_03251554.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4206] gi|208815330|ref|ZP_03256509.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4045] gi|208823220|ref|ZP_03263538.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4042] gi|209395856|ref|YP_002269088.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4115] gi|217325591|ref|ZP_03441675.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. TW14588] gi|254791625|ref|YP_003076462.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli O157:H7 str. TW14359] gi|261223924|ref|ZP_05938205.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli O157:H7 str. FRIK2000] gi|261256362|ref|ZP_05948895.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli O157:H7 str. FRIK966] gi|12513303|gb|AAG54791.1|AE005223_6 putative protease maturation protein [Escherichia coli O157:H7 str. EDL933] gi|13359952|dbj|BAB33918.1| putative protease maturation protein [Escherichia coli O157:H7 str. Sakai] gi|187767557|gb|EDU31401.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4196] gi|188017729|gb|EDU55851.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4113] gi|189002976|gb|EDU71962.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4076] gi|189357979|gb|EDU76398.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4401] gi|189362425|gb|EDU80844.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4486] gi|189369155|gb|EDU87571.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4501] gi|189373538|gb|EDU91954.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC869] gi|189379237|gb|EDU97653.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC508] gi|208729018|gb|EDZ78619.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4206] gi|208731978|gb|EDZ80666.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4045] gi|208737413|gb|EDZ85097.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4042] gi|209157256|gb|ACI34689.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4115] gi|209743814|gb|ACI70214.1| putative protease maturation protein [Escherichia coli] gi|209743816|gb|ACI70215.1| putative protease maturation protein [Escherichia coli] gi|209743818|gb|ACI70216.1| putative protease maturation protein [Escherichia coli] gi|209743822|gb|ACI70218.1| putative protease maturation protein [Escherichia coli] gi|217321812|gb|EEC30236.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. TW14588] gi|254591025|gb|ACT70386.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli O157:H7 str. TW14359] gi|320192857|gb|EFW67497.1| Peptidyl-prolyl cis-trans isomerase ppiD [Escherichia coli O157:H7 str. EC1212] gi|320638436|gb|EFX08150.1| periplasmic folding chaperone [Escherichia coli O157:H7 str. G5101] gi|320643817|gb|EFX12940.1| periplasmic folding chaperone [Escherichia coli O157:H- str. 493-89] gi|320649168|gb|EFX17746.1| periplasmic folding chaperone [Escherichia coli O157:H- str. H 2687] gi|320656061|gb|EFX23977.1| periplasmic folding chaperone [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320665187|gb|EFX32280.1| periplasmic folding chaperone [Escherichia coli O157:H7 str. LSU-61] gi|326341205|gb|EGD64997.1| Peptidyl-prolyl cis-trans isomerase ppiD [Escherichia coli O157:H7 str. 1044] gi|326346020|gb|EGD69759.1| Peptidyl-prolyl cis-trans isomerase ppiD [Escherichia coli O157:H7 str. 1125] Length = 623 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 42/396 (10%), Positives = 106/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVRE----------- 177 + + + E EI + ++ KN + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 178 ---------------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220 Y + + + K +A+ L K + Sbjct: 240 AATMQQPVSDADLQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 221 --KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 K A I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDVAAKVKHEKALDAYYALQQKVSDAA 395 >gi|218961587|ref|YP_001741362.1| putative Parvulin-like peptidyl-prolyl isomerase [Candidatus Cloacamonas acidaminovorans] gi|167730244|emb|CAO81156.1| putative Parvulin-like peptidyl-prolyl isomerase [Candidatus Cloacamonas acidaminovorans] Length = 281 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 29/274 (10%), Positives = 89/274 (32%), Gaps = 11/274 (4%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +I + I++ ++ + A + L + L + A++ LI L + +SGI Sbjct: 2 QIIAKVFEFEISEQELERECAKVSLAEREKCL-EGALKRLIDRCLLLYKAMESGIKISDT 60 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + + + ++ L + + + + F Sbjct: 61 EYENAIWEL---LDEEDPLKLWSTSLEQLTPQEMEKLLKQRLMINKYINSIFPQNIPITN 117 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +I + K ++ +R I ++ + + ++ ++ + Sbjct: 118 AKIKEFYDEQKEFFLKPEQVRCSHILIRNDNEEAKAKAEQIRRE----IHNADDFTYFCQ 173 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICD--KRD 277 K++ + G + + P+ + + + + P+++ G + +++ Sbjct: 174 KYSDCPSNNVCGDLGWFPRGKMIPEIEEVAFSLTVGEISQPFLSPYGYHILMKTGQSEKE 233 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 +K L A+ + E ++ +LR Sbjct: 234 YIPFEDIKDSLYARLQQIEREYKLLRHLAELRKQ 267 >gi|218892241|ref|YP_002441108.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa LESB58] gi|218772467|emb|CAW28249.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa LESB58] Length = 621 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 46/402 (11%), Positives = 111/402 (27%), Gaps = 89/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++++ + + S + +NG+ I+ ++ + + Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIIVLLSLTGFDAIIRATDHSNVAAKVNGDDISLNEVQQAV 60 Query: 61 ALLKLQ-------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q + L++ A++ LI TL Q + F ++ Sbjct: 61 DMQRRQLLQRLGKDFDPSMLDDKLLKEAALKGLIERTLLLQAAKDDKFAFSDQALDQLIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF------------ 152 + + +A+ F + + F+Q L + + + Sbjct: 121 QTPEFQVDGKFNADRFDQVIRQMNYSRMQFRQMLGQEMLIGQLRAGLAGTGFVTDNELQS 180 Query: 153 ---------------------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 E++ K + +T + ++ V Sbjct: 181 FARLEKQTRDFATLAIKADASKSSVSEDEVKAFYEGHKSEFMTPEQVVVEYVELKKSSFF 240 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKL-------------------------------- 219 Q + + ++ L + + Sbjct: 241 DQVKVKQEDLEALYQKEIANLSEQRDAAHILIEVNDKVGDEQAKAKIDEIKARLAKGEDF 300 Query: 220 ----EKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 ++F+ I + G Y P F+ Q + P T G I + Sbjct: 301 AALAKEFSQDIGSAATGGDLGYAGRGVYDPAFEEALYALKQGEVSAPVKTPYGYHLIKLL 360 Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ +LK L + +E+ E K L S+A Sbjct: 361 GVQAPEVPSLESLKPKLEDELKKQMVEQRFVEATKDLESSAY 402 >gi|213157107|ref|YP_002319152.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB0057] gi|215483612|ref|YP_002325833.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii AB307-0294] gi|301345175|ref|ZP_07225916.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB056] gi|301511287|ref|ZP_07236524.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB058] gi|332851812|ref|ZP_08433737.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6013150] gi|332865808|ref|ZP_08436592.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6013113] gi|193077182|gb|ABO11972.2| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii ATCC 17978] gi|213056267|gb|ACJ41169.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB0057] gi|213989120|gb|ACJ59419.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii AB307-0294] gi|332729819|gb|EGJ61154.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6013150] gi|332735020|gb|EGJ66105.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6013113] Length = 436 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 104/314 (33%), Gaps = 20/314 (6%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIA----LLKLQK- 67 K L +F ++ S S+A + + ++ VI D+ + +A L+ QK Sbjct: 4 KHLKQFFKATTLAVLISSSMHSFAQPTDEVVAIVDNSVILKSDLEQGMAEAAHELQAQKK 63 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSS 122 L+ + +LI+ + ++++K GI D ++N ++ A +G Sbjct: 64 EVPPQQYLQFQVLDQLILRQAQLEQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQK 123 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + + +A + + M + + ++ + + Sbjct: 124 LDAIAPGTYENLRSRIAEDLAINRLRQQQVMSRIKISDQDVDNFLKSPQGQAALGNQAHV 183 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + I + Q V K ++ L N L+K ++ V + SD+ Sbjct: 184 IHMRISGDNPQEVQNVAKEVRSQLAQSNDL----NALKKLSTATVKVEGADMGFRPLSDI 239 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD----LGGEIALKAYLSAQNTPTKI 297 + + TT+ + GV + + +++ ++ Q + Sbjct: 240 PAELAARITPLQDGQTTDLISVRDGVHVLKLLERKQNEQKALVPQYQTRHILIQPSEVVS 299 Query: 298 EKHEAEYVKKLRSN 311 ++ + + + Sbjct: 300 PENAKQIIDSIYKR 313 Score = 88.2 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 17/157 (10%), Positives = 52/157 (33%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + ++K +T I +++ + ++ I + + Sbjct: 268 LKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENAKQIIDSIYKRLKAGEDFATLAATY 327 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 ++ G ++ + P+F + + + + P+ TQ G + + DKR+ Sbjct: 328 SNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHILQVTDKREKDM 387 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + +++++R+NA + Sbjct: 388 THEYQERMARQILGERQFNTEIDSWLREVRANAYVEI 424 >gi|292490923|ref|YP_003526362.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus halophilus Nc4] gi|291579518|gb|ADE13975.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus halophilus Nc4] Length = 637 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 32/406 (7%), Positives = 101/406 (24%), Gaps = 99/406 (24%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I F + I +Y + + ++NGE IT + Sbjct: 1 MLEAIRSRAQGIFAWVIVGLITIPFALWGINNYFREGGEA-LAASVNGEEITTREFRAAF 59 Query: 61 ALLKLQKI-------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 Q + ++ ++ LI + L + G+ + ++ Sbjct: 60 QRYTQQLRFLMREGFSEEMLDDPATKQRVLEGLIEQRLVLDAAGELGLGMSDSELSKVIH 119 Query: 108 QHARNTGLSAEDFSSFLD-------------------------------------KQGIG 130 + + + + +Q + Sbjct: 120 NNEAFQDETGQFDFQRYESVLNSQGLTTAAYEARLRLSLLSEQLASTLHLSAFATQQEME 179 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT---------------- 174 D ++ + + V + F + E+ ++ + Sbjct: 180 DIARLRHQEREIGYGIVPSSKFRDAIQISDEELRQYYEEHPDEFRTPERVAVDYLRLTAK 239 Query: 175 ---------------------------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + ++ + +++ ++A Sbjct: 240 SLATDIPVDEQTLRDLYAESKDQFGTPEQRRASHILVQVPQGGDDAARQAAREKAEEALR 299 Query: 208 SRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQ 264 + ++ + G + + P F+ + + + P +++ Sbjct: 300 RLQQGEPFEEVAKEVSEDPGSAQQGGDLGFFGRGVMDPAFEEAAFSLEKVGDLSEPVLSK 359 Query: 265 KGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 G I + + + ++ L+ + E+H E + L Sbjct: 360 FGYHIIQLTGIQRGEAPSFEEVREELAQKYRQQLAEEHFYEQAETL 405 >gi|260550086|ref|ZP_05824300.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. RUH2624] gi|260406841|gb|EEX00320.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. RUH2624] Length = 441 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 101/314 (32%), Gaps = 20/314 (6%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISK-------RIALLKL 65 K L +F ++ S S+A + + ++ VI D+ + + K Sbjct: 9 KHLKQFFKATTLAVLISSSMHSFAQPTDEVVAIVDNSVILKSDLEQGMAEATHELQSQKK 68 Query: 66 QKINGELEK-IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSS 122 + + + + +LI+ + +++++ GI D ++N ++ A +G Sbjct: 69 EVPPQQYLQFQVLDQLILRQAQLEQVKRYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQK 128 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + + +A + + M + + ++ + + Sbjct: 129 LDAIAPGTYENLRGRIAEDLAINRLRQQQVMSRIKISDQDVDNFLKSPQGQAALGNQAHV 188 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + I + Q V K ++ L N L+K ++ V + SD+ Sbjct: 189 IHMRISGDNPQEVQSVAKEVRSKLAQSNDL----NALKKLSTATVKVEGADMGFRPLSDI 244 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD----LGGEIALKAYLSAQNTPTKI 297 + + TT+ + GV + + +++ ++ Q + Sbjct: 245 PAELAARITPLQDGQTTDLISVRDGVHVLKLLERKQNEQKALVPQYQTRHILIQPSEVVS 304 Query: 298 EKHEAEYVKKLRSN 311 ++ + + + Sbjct: 305 PENAKQIIDSIYKR 318 Score = 89.0 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 17/157 (10%), Positives = 52/157 (33%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + ++K +T I +++ + ++ I + + Sbjct: 273 LKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENAKQIIDSIYKRLKAGEDFATLAATY 332 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 ++ G ++ + P+F + + + + P+ TQ G + + DKR+ Sbjct: 333 SNDTGSARDGGSLGWVNPGMMVPEFDKKMQEIPVGQISEPFQTQFGWHILQVTDKREKDM 392 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + +++++R+NA + Sbjct: 393 THEYQERMARQILGERQFNTEIDSWLREVRANAYVEI 429 >gi|226952980|ref|ZP_03823444.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. ATCC 27244] gi|226836301|gb|EEH68684.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. ATCC 27244] Length = 437 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 98/311 (31%), Gaps = 18/311 (5%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA----LLKLQKI----N 69 + ++ ++ + + + ++ VI D+ + IA LK Q Sbjct: 9 IFRATVLAALISSSMHSFAQPADEVVAIVDSSVILKSDLVQGIAEAEHQLKAQNQTVPPK 68 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSSFLDKQ 127 L+ + +LI+ + +++++ GI D N++N ++ A +G + + Sbjct: 69 QYLQMQVLDQLIIRQAQLEQVKRYGIKPDENSLNAAVLRVANQSGSNSLSAFQQKLDAIA 128 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + + +A + + M + + ++ +K+ + L V Sbjct: 129 PGTYENLRNRIAEDLAIGRLRQQQVMSRIKISDHDVENF---LKSPEGQAALGTQVHVLH 185 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + VQK ++ S K ++ V + S++ + Sbjct: 186 MRISGTDNNEVQKVAEEVRRSLATSNDPKAISSKLSTGTVTVDGADMGFRALSEIPTELA 245 Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRD----LGGEIALKAYLSAQNTPTKIEKHEA 302 + TT + G + + +++ ++ Q + Sbjct: 246 ARVTPLQVGQTTGLVNVRDGTHVLKLLERKQNDQRALVPQYKTRHILIQTSEVVSSDRAK 305 Query: 303 EYVKKLRSNAI 313 + + L + Sbjct: 306 QMIDSLYNRIK 316 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 48/142 (33%), Gaps = 3/142 (2%) Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY 236 +T I +++ + ++ I F++ G + Sbjct: 284 PQYKTRHILIQTSEVVSSDRAKQMIDSLYNRIKAGEDFATLAATFSNDPGSARDGGNLGW 343 Query: 237 LLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQNTP 294 + + P+F+ ++K+ + P+ +Q G + + D R + + Sbjct: 344 VNAGVMVPEFEKVMKEIPVGQLSEPFQSQFGWHILEVTDTRQQDMTKEAQERMTRQILGE 403 Query: 295 TKIEKHEAEYVKKLRSNAIIHY 316 + E + ++LR+NA + Sbjct: 404 RQFETEVDSWTRELRANAYVEI 425 >gi|254453743|ref|ZP_05067180.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Octadecabacter antarcticus 238] gi|198268149|gb|EDY92419.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Octadecabacter antarcticus 238] Length = 388 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 89/248 (35%), Gaps = 5/248 (2%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 T+N V+++ +I +R+ +L + G LE A ++LI + LK + +G+ + Sbjct: 14 AITVNDSVVSEFEIDQRVIMLGTFRTPGNLEDTAREQLIEDRLKLAALNSAGLRITDEGL 73 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + A + + F + L + G+ + F+ ++ + W D ++ F + E + Sbjct: 74 VGAMGEFATRANMDLDQFITMLGQSGVSEETFRDFVRVNVSWRDFIRTRFNDRAQVSEAD 133 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + + E L+ ++ D + + Sbjct: 134 IDLALGQSDASSSIEVLLSEII----IPAPPESAEQANATADRIAQLTSTAAFEAEARRV 189 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 ++ G+ +L S+ + LL + T P GV + D R++ Sbjct: 190 SALPSKTRGGRLDWLPISNYPAGLRGLLLNLAPGEITAPLPITNGVALFQMRDVREVPRA 249 Query: 282 IALKAYLS 289 A + Sbjct: 250 APEPAAIE 257 >gi|262370367|ref|ZP_06063693.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter johnsonii SH046] gi|262314709|gb|EEY95750.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter johnsonii SH046] Length = 439 Score = 97.1 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 28/289 (9%), Positives = 88/289 (30%), Gaps = 21/289 (7%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEKIAVQELIVETLKKQE 89 S + ++ VI D+ + LK Q L + A+++LI+ + ++ Sbjct: 34 ASDEVVAVVDNSVILKSDLEASMTELKHQLESQKKQVPPEQYLAQQALEQLIIRQTQLEQ 93 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 +++ I D ++N + A+ +G + + +A + Sbjct: 94 VKRYNIQPDEKSLNEAVLNVAKQSGSTSLEAFQQKLDKMAPGTYASLRSRVAEDLAINRL 153 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + + ++ + + + + + K Sbjct: 154 RQQIVTSRIQISDQDVKNFLNTPQGQAALGNQVHVLHVRVSGDNADTVAKQVKT------ 207 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKG 266 +KF++ V + SD+ + + T+ + G Sbjct: 208 VLANDNDVAAIAKKFSTAGTKVEGADMGFRALSDIPSELAARVSPLQVGQITDLITVRDG 267 Query: 267 VEYIAICDKRDLGGEIAL----KAYLSAQNTPTKIEKHEAEYVKKLRSN 311 V + + +++ + + ++ Q + ++ + ++ L + Sbjct: 268 VHLLKLVERKGAEQKAIVPQYKARHILIQPSEVVSPENAKQMIESLYNR 316 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 15/142 (10%), Positives = 48/142 (33%), Gaps = 3/142 (2%) Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY 236 + I +++ + ++ I+ + +++ G + Sbjct: 286 PQYKARHILIQPSEVVSPENAKQMIESLYNRVQKGEDFAVLASTYSNDTGSARDGGSLGW 345 Query: 237 LLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQNTP 294 + + PQF+ +K + T+ P+ TQ G + + + R + + Sbjct: 346 VSPGVMVPQFEETMKNTPVGQTSKPFQTQFGWHILQVTETRQQDMTAEYQERMARQILGE 405 Query: 295 TKIEKHEAEYVKKLRSNAIIHY 316 + + ++++ R+ A + Sbjct: 406 RQFDAELDSWLRETRNRAFVEI 427 >gi|295106377|emb|CBL03920.1| Parvulin-like peptidyl-prolyl isomerase [Gordonibacter pamelaeae 7-10-1-b] Length = 439 Score = 97.1 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 35/346 (10%), Positives = 96/346 (27%), Gaps = 45/346 (13%) Query: 14 KLLTTYFVLIIF--CIVPIVSYKSWAMSSR-------IRTTINGEVITDGDISKRIALLK 64 ++ V + C+ + + A +S + T+NG I + +++ + ++ Sbjct: 5 NIMKAVCVAGLAATCVWGLAACADGASASGTKTYTGGVAATVNGTEIPEDEVTGMVESIR 64 Query: 65 LQK-------------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 Q N + +E+I +++ I++ + + + Sbjct: 65 SQMSMTDADTWGQWLADNAMTPESVREEMIDSFAQQELIKQGAKEKNISVESSEIDDIVN 124 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM--EIPANKQK 169 T + ED + ++Y +++ +++ + + E + K Sbjct: 125 KTKANYEDDEKWKAALEQAGFTEEKY--RENVESQLLQKKLTESFASDEEPSQEDLLKYA 182 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + + R+ V +I + K +K + Sbjct: 183 QMYASAYDGAKRSSHILFDSGDEATAQSVLDQINSGQLDFAEAAKQYSKDNAEGTGGSAA 242 Query: 230 SIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK----------RDL 278 G + S ++ + ++ + +Q G+ I D Sbjct: 243 KGGDVGWDKLSSFVTEYTDALAGLEKDQVSGLVTSQYGIHIIKCTDVFNAPKVVGEDGTE 302 Query: 279 GGEIALKAYL--------SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 E+ + E+ + + NA I Sbjct: 303 TVELTSTDQIPVEFLDSVKESLKQQNQSTAVQEWFNEYKENADIQI 348 >gi|254234899|ref|ZP_04928222.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa C3719] gi|296389804|ref|ZP_06879279.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas aeruginosa PAb1] gi|126166830|gb|EAZ52341.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa C3719] Length = 621 Score = 97.1 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 46/402 (11%), Positives = 111/402 (27%), Gaps = 89/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++++ + + S + +NG+ I+ ++ + + Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIIVLLSLTGFDAIIRATDHSNVAAKVNGDDISLNEVQQAV 60 Query: 61 ALLKLQ-------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q + L++ A++ LI TL Q + F ++ Sbjct: 61 DMQRRQLLQRLGKDFDPSMLDDKLLKEAALKGLIERTLLLQAAKDDKFAFSDQALDQLIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF------------ 152 + + +A+ F + + F+Q L + + + Sbjct: 121 QTPEFQVDGKFNADRFDQVIRQMNYSRMQFRQMLGQEMLIGQLRAGLAGTGFVTDNELQS 180 Query: 153 ---------------------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 E++ K + +T + ++ V Sbjct: 181 FARLEKQTRDFATLAIKADASKSSVSEDEVKAFYEGHKSEFMTPEQVVVEYVELKKSSFF 240 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKL-------------------------------- 219 Q + + ++ L + + Sbjct: 241 DQVKVKQEDLEALYQKEIANLSEQRDAAHILIEVNDKVGDEQAKAKIDEIKARLAKGEDF 300 Query: 220 ----EKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 ++F+ I + G Y P F+ Q + P T G I + Sbjct: 301 AALAKEFSQDIGSAATGGDLGYAGRGVYDPAFEEALYALKQGEVSAPVKTPYGYHLIKLL 360 Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ +LK L + +E+ E K L S+A Sbjct: 361 GVQAPEVPSLESLKPKLEDELKKQMVEQRFVEATKDLESSAY 402 >gi|198276169|ref|ZP_03208700.1| hypothetical protein BACPLE_02358 [Bacteroides plebeius DSM 17135] gi|198270981|gb|EDY95251.1| hypothetical protein BACPLE_02358 [Bacteroides plebeius DSM 17135] Length = 467 Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 37/319 (11%), Positives = 94/319 (29%), Gaps = 19/319 (5%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI- 60 ++ I +T +++ + + + + + E I D+ Sbjct: 4 NKSNRQKMNKLI--MTGVLAILLALTGTVPAVAQDNVIDEVVWVVGDEAILKSDVENERL 61 Query: 61 -ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 A + ++ +G+ + +EL V+ L + E I V Sbjct: 62 NAQYEGRRFDGDPYCVIPEELAVQKLFLHQAEIDSIEVSDQEVLQQVETRISWLTDQIGS 121 Query: 120 FSSFLDKQGIGDNHFKQYLAIQS---IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + ++ L + ++ + E+ K+ ++ Sbjct: 122 KEKLEEYYNKTSTQIREMLRENIRDGLTVQEMQKKIVGDIKLTPAEVRNYFSKLPQDSIP 181 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-----HDVSI 231 + + I + +++ K+ + R+ K A Sbjct: 182 FVPTQVEVQIITREPKIKEEEIERVKKELRDFTDRINKGETTFSTLARMYSEDPGSARRG 241 Query: 232 GKAQYLLESDLHPQFQNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 G+ + +L P+F N++ + + + T+ G + +KR G+ ++ Sbjct: 242 GEYGFTGRGELTPEFANVVFNLTDPKKISKVFETEYGYHIAQLIEKR---GDRVSYRHIL 298 Query: 290 AQNTPTKIEKHEAEYVKKL 308 P EK + KL Sbjct: 299 --IKPRVDEKEIEAELNKL 315 >gi|311104694|ref|YP_003977547.1| PPIC-type PPIASE domain-containing protein 1 [Achromobacter xylosoxidans A8] gi|310759383|gb|ADP14832.1| PPIC-type PPIASE domain protein 1 [Achromobacter xylosoxidans A8] Length = 258 Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 99/305 (32%), Gaps = 52/305 (17%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELE 73 + +L C++ + ++ T+NG+ I + + + LL Q + +L Sbjct: 1 MKRIVMLAAACVIAVPAFAQN------VATVNGKAIPQKSLDQFVKLLVSQGATDSPQLR 54 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + QE+I + Q E SGI ++ Sbjct: 55 EQVKQEMINRQIFVQAAEASGIAKQADVQTEV---------------------------- 86 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 LA Q I + D++ K+ + ++ A +K+K + + + D K Sbjct: 87 ---ELARQGILVRALMADYLAKHPVSDAKVTAEYEKIKKEQAGKMEYKVRHILVEDEKTA 143 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 N Q + K + +K + G + ++ F + + Sbjct: 144 NDLLAQIKSNK--------SKFNDLAKKNSKDPGSAEKGGDLGWAPPTNYVQPFAQAVTQ 195 Query: 253 SQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + P TQ G I + D R + E + Q ++ A+Y K+LR Sbjct: 196 LKKGELVDKPVQTQFGWHIIMVDDTRPV--EFPPLDQVRPQLEEMLRQQTLADYQKELRE 253 Query: 311 NAIIH 315 A I Sbjct: 254 KAKIQ 258 >gi|325846702|ref|ZP_08169617.1| putative peptidylprolyl isomerase PrsA1 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481460|gb|EGC84501.1| putative peptidylprolyl isomerase PrsA1 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 345 Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 41/323 (12%), Positives = 98/323 (30%), Gaps = 42/323 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSR-------------------IRTTINGEVITDG 54 K + + F + + + + + GE I+ Sbjct: 3 KKIIALVLATSFLFSACANDNAKDKNDKGSNETQTSESAKKEDLPKDAVAVVGGEKISKE 62 Query: 55 DISKRIALLKL-QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 ++ +L+ VQ LI + L +++K+ + D +N F+Q+ + Sbjct: 63 SYKDEMSFYSAMLASQQQLKPSIVQMLIQDKLIADDMKKNDVKVDDKELNDKFLQYIQQF 122 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 G + D D + Q + F K + +I + K+ Sbjct: 123 GGQEKFDKMLEDYNMSSDKFKETIKKDQIYQKH--REWFEKKNPVSDKDIKKYYDEHKDT 180 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIG 232 + ++ + K+ ++ ++++ + G Sbjct: 181 LAQVKASHILV------------EDENTAKEVKKKLDDGEDFAKLAKEYSKDTANSAKGG 228 Query: 233 KAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 Y + + +F + + ++P T G I + DK+D L + Sbjct: 229 DLGYFTKDKMVKEFADKAFAMKKGEISDPVKTSYGYHIIKVEDKKDNP------DALKEE 282 Query: 292 NTPTKIEKHEAEYVKKLRSNAII 314 + +K A+Y+ L + A + Sbjct: 283 ISKALNDKKYADYLTDLFNKANV 305 >gi|255657457|ref|ZP_05402866.1| putative foldase lipoprotein (late stage protein export lipoprotein) [Clostridium difficile QCD-23m63] gi|296449052|ref|ZP_06890842.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP08] gi|296262145|gb|EFH08950.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP08] Length = 331 Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 39/326 (11%), Positives = 97/326 (29%), Gaps = 32/326 (9%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI------- 68 + L+I I+ + + T+ G I+ + K IAL K Sbjct: 1 MKKVITLVIAMILVVSVTACNSSKGETVATVEGTKISSDEFKKTIALYKDSMEQTYGKDI 60 Query: 69 -----------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 + + + + +LI + + +K + V F + G Sbjct: 61 WDKEVEKGVKYKDKFKDLILDQLITTEVIYSQAKKDNLLPKKEDVEKSFKELKDAMGKDE 120 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 + + Q + +++F K + E+ K+ ++ Sbjct: 121 KYKEQLKKLGIDDEFLRDQQEKD--LAMQNYQSNFTKKTKISDEEMKKYYDTHKDEFKKD 178 Query: 178 YLIRTVLFSIPDNKLQNQ------GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 + + + + +K+ ++A + +K++ Sbjct: 179 EVEASHILLKTVDDNNKPLSAKEKAEAKKKAEEALKEVKSGEDFAKVAKKYSQDASASDG 238 Query: 232 GKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK-RDLGGEIALKAYLS 289 GK + + +F++ + ++ TQ G I + D+ + K + Sbjct: 239 GKLGFFSRGQMVAEFEDAAFSMKKGEVSDLVETQYGYHIIKVTDRINEQTSFEDAKETIK 298 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIH 315 Q K ++ ++KL A + Sbjct: 299 DQLLKNKYQEQ----IEKLTKEAKVE 320 >gi|146339244|ref|YP_001204292.1| putative peptidylprolyl isomerase [Bradyrhizobium sp. ORS278] gi|146192050|emb|CAL76055.1| putative Peptidylprolyl isomerase [Bradyrhizobium sp. ORS278] Length = 308 Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 30/318 (9%), Positives = 90/318 (28%), Gaps = 41/318 (12%) Query: 9 LSDFIKLLTTYFVLIIFCIVPI--VSYKSWAMSSRIRTTINGEVITDGD---ISKRIALL 63 + + + T + V + + ++ A + + T+NG I + + + + + Sbjct: 8 MRRSLAIRTHFVVACLAASLGATEIARAEQASADPVIATVNGSEIHESELAMVDEIVGRN 67 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 + E ++ +I L + I +++ Sbjct: 68 LPTQDRIERRDTILKMMIDTILLSDIARERKIVDEADIARRT------------------ 109 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + Q + +++ + +K + + + Sbjct: 110 ------------TFARNQGLMTQLLREVGQRAVSEETVRKAYEDVVLKAASEQTEVHLRH 157 Query: 184 LFSIPDN--KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 L + + + ++ R + A E + + + G + + Sbjct: 158 LVFLTKDAPDDAARKAIEARAQAALERLKKGEDFAAVATETSDDPVTKSRGGDFGWRIRP 217 Query: 241 DLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 +L ++ + + + + T G+ I + D+R + + Sbjct: 218 ELSKEYADAAFEMKNGDISPLIKTGVGLHIIKLEDRRTRRP--PEFDTVRERVAAMVSAT 275 Query: 300 HEAEYVKKLRSNAIIHYY 317 + E V K R+ A I + Sbjct: 276 AQIELVDKARAAAKIERF 293 >gi|329888709|ref|ZP_08267307.1| PPIC-type PPIASE domain protein [Brevundimonas diminuta ATCC 11568] gi|328847265|gb|EGF96827.1| PPIC-type PPIASE domain protein [Brevundimonas diminuta ATCC 11568] Length = 313 Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 31/306 (10%), Positives = 76/306 (24%), Gaps = 43/306 (14%) Query: 18 TYFVLIIFCIVPIVSY------KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 + V++ + + + + + R+ +N + D+ Sbjct: 10 LFLVVVAGLALGVAACGRGGDEAAPEKNDRVVARVNDRAVWASDVR-------------- 55 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + Q LI E + V+ + ++ Q Sbjct: 56 -REAVAQGLIGEDDPLDASSELFRRVMDEVVDQKLLAAEAERRGLDSSPAAQRRLQ---- 110 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + +V+ +E +Q+ E +R +L Sbjct: 111 -----AVRERILGDMLVEKVVSGAVSEQAVERLYAEQQRLARATEEVRVRLILAP----- 160 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH-PQFQNLL 250 ++ + ++ S G Y L P L Sbjct: 161 -----TKEQADAVLGVLGQGAAFEAVAAQRSIDDATRYSGGDLGYSTLDVLPGPYAAALQ 215 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 ++ P T+ G + + D+R Q + + +++LR Sbjct: 216 GQTPGAVVGPIQTETGWAVLKVEDRRVETP--PTLEQARPQIVRYLTYEGVRQLLEQLRG 273 Query: 311 NAIIHY 316 A + Sbjct: 274 QAEVEI 279 >gi|313888122|ref|ZP_07821796.1| putative foldase protein PrsA [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845812|gb|EFR33199.1| putative foldase protein PrsA [Peptoniphilus harei ACS-146-V-Sch2b] Length = 362 Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 94/323 (29%), Gaps = 39/323 (12%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-------- 66 L + + + + + + G I D K A Q Sbjct: 2 FLKKFGKIAVTIALAGSLVACSGANKDAAAKVGGVEIPMADFYKSYAARVNQLTSMYGED 61 Query: 67 ----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 + L + A+ +L KQ+ EKS IT VN + G Sbjct: 62 VLKNKEDGKKSTDELLREQAITDLTTTEALKQDAEKSKITVSDEEVNKKLDEIKAQLG-G 120 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 E F+ FL + G+ + + + Q + + E + + Sbjct: 121 EEAFNKFLKENGLPKEYVAENMKNQMLVGKYTQEKLKELEPTEEEVKKQYEDNKDSYYKA 180 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQ 235 + V K + L+ ++ + + G Sbjct: 181 KASHILV-------------DDLKEANVLRKKILKGEDFAKLAKENSKDTGSAQNGGSLG 227 Query: 236 YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 + F + + K + + P TQ G I + DK+ L A+K + AQ Sbjct: 228 EFTSGQMVEAFDKEIAKMKVGDISEPITTQFGYHIIKLEDKKPLE-FDAVKDQIKAQLQQ 286 Query: 295 TKIEKHEAEYVKKLRSNAIIHYY 317 K EY+ K++ +A I Y Sbjct: 287 EK----FKEYIDKVKKDAKIKIY 305 >gi|117921098|ref|YP_870290.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. ANA-3] gi|117613430|gb|ABK48884.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. ANA-3] Length = 621 Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 39/407 (9%), Positives = 91/407 (22%), Gaps = 95/407 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ I V++ F + SY + S +NG+ IT ++ + Sbjct: 1 MLEKIRDGSQGVIAKGILVLVILSFAFAGVSSYLG-SKSDVPAAEVNGDKITKAELEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +++ ++ L+ + L Q G+ + Sbjct: 60 QSERARMEQQLGEMFAALSADERYLESIKQSVLERLVADKLIDQAAAAMGLRVSDEQIIT 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + + + + L + G F+ + + + Sbjct: 120 AIKSEPAFQTDGKFDNDRYQAILRQLGYQPQTFRSMMRVDMTRRQLTAALVGTEFVLPGE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS-- 186 F+ + ++ + + + Sbjct: 180 AKQLAELQGQTRDIRYLVVDSAPFLANASVTDEQVKNYYDTNQGQFMSPEKVSLEYVELN 239 Query: 187 ---IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK------------------------- 218 + Q + + + K Sbjct: 240 AADFAKDSKVTDEEAQAYYDEHKTQYVSNEKRLAAHILIGPGSDEAAAKAKAEDLAKQLD 299 Query: 219 ----LEKFASKIHDV-----SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVE 268 + A + GK + + P F L + + T G Sbjct: 300 NGADFAELAKANSEDTLSAEQGGKLDWFEPGVMDPSFDTALFALQKGQHSAVVKTDFGFH 359 Query: 269 YIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 I + D + +KA + AQ K KL + Sbjct: 360 IIKLLDVQPGTTVPFADVKAKIVAQLQEKKAVDQFYSLQSKLADTSY 406 Score = 41.2 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 39/131 (29%), Gaps = 4/131 (3%) Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + K+ + E +R + + +++ A+ + + K + Sbjct: 487 EVKADIAERLKQDQANEAARAKAQELMTQVKAGATDVSLTAKTKLGRGAQDVDAAIVGKA 546 Query: 250 LKKSQNNTTNPYVT---QKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYV 305 + T T G IA+ L L + E + Sbjct: 547 FQMPTPTATPVVDTVGLANGYAVIALDKVNAAESVSDELVNALKQRLNAQYSEADYRGLI 606 Query: 306 KKLRSNAIIHY 316 + L++NA +HY Sbjct: 607 ESLKANAKVHY 617 >gi|210634928|ref|ZP_03298375.1| hypothetical protein COLSTE_02304 [Collinsella stercoris DSM 13279] gi|210158557|gb|EEA89528.1| hypothetical protein COLSTE_02304 [Collinsella stercoris DSM 13279] Length = 417 Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 30/340 (8%), Positives = 100/340 (29%), Gaps = 39/340 (11%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRI------------RTTINGEVITDGDISKRIAL 62 + + I ++ + + + + + T+NG I + ++++I Sbjct: 43 KIVLVAIGIAAMLLSVSAMACSGVLNEVQSKEDYKLTGGVAATVNGVNIKEDSVTEQIMS 102 Query: 63 LKLQ----------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 ++ + + ++ + L Q + GI ++ + Sbjct: 103 MRQSAYESDKDWATYLSQQGMTPETYRENVIDSIVRQYLLVQAEKDYGIKVTQEDLDKAW 162 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + G + F + + G + + + + + + +I A Sbjct: 163 KEAVEGNGGDEDAFVETISQFGFTKETYLENIKSSLAQQKL-REKVAGVKKPSDEDIVAY 221 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK--DCNKLEKFAS 224 + + +LF + ++ + + + +L + EK++ Sbjct: 222 LNENLSTYNDARRSSHILFKVAEDATEEERAKVEAEAQKVLDKLNAGEIEFAKAAEKYSE 281 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDL----- 278 + G + + ++Q+ S + T G I + ++ Sbjct: 282 DGSAKNGGDVGWDKLTTFVTEYQDALSGLSDGQMSGLVKTTYGYHIIKCTGQFNVQTVSS 341 Query: 279 --GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ ++ + T + +E++ + A I Sbjct: 342 IDEVPEGIRDAIAERIKTTAESEKYSEWLTEYTEKADIKI 381 >gi|184157913|ref|YP_001846252.1| parvulin-like peptidyl-prolyl isomerase [Acinetobacter baumannii ACICU] gi|332872750|ref|ZP_08440716.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6014059] gi|183209507|gb|ACC56905.1| Parvulin-like peptidyl-prolyl isomerase [Acinetobacter baumannii ACICU] gi|323517858|gb|ADX92239.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii TCDC-AB0715] gi|332739047|gb|EGJ69908.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6014059] Length = 436 Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 104/314 (33%), Gaps = 20/314 (6%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIA----LLKLQK- 67 K L +F ++ S S+A + + ++ VI D+ + +A L+ QK Sbjct: 4 KHLKQFFKATTLAVLISSSMHSFAQPTDEVVAIVDNSVILKSDLEQGMAEAAHELQAQKK 63 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSS 122 L+ + +LI+ + ++++K GI D ++N ++ A +G Sbjct: 64 EVPPQQYLQFQVLDQLILRQAQLEQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQK 123 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + + +A + + M + + ++ + + Sbjct: 124 LDAIAPGTYENLRSRIAEDLAINRLRQQQVMSRIKISDQDVDNFLKSPQGQAALGNQAHV 183 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + I + Q V K ++ L N L+K ++ V + SD+ Sbjct: 184 IHMRISGDNPQEVQNVAKEVRSQLAQSNDL----NALKKLSTATVKVEGADMGFRPLSDI 239 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD----LGGEIALKAYLSAQNTPTKI 297 + + TT+ + GV + + +++ ++ Q + Sbjct: 240 PAELAARITPLQDGQTTDLISVRDGVHVLKLLERKQNEQKALVPQYQTRHILIQPSEVVS 299 Query: 298 EKHEAEYVKKLRSN 311 ++ + + + Sbjct: 300 PENAKQIIDSIYKR 313 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 17/157 (10%), Positives = 52/157 (33%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + ++K +T I +++ + ++ I + + Sbjct: 268 LKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENAKQIIDSIYKRLKAGEDFAILAATY 327 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 ++ G ++ + P+F + + + + P+ TQ G + + DKR+ Sbjct: 328 SNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHILQVTDKREKDM 387 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + +++++R+NA + Sbjct: 388 THEYQERMARQILGERQFNTEIDSWLREVRANAYVEI 424 >gi|242309441|ref|ZP_04808596.1| cell-binding factor 2 [Helicobacter pullorum MIT 98-5489] gi|239524012|gb|EEQ63878.1| cell-binding factor 2 [Helicobacter pullorum MIT 98-5489] Length = 272 Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 90/311 (28%), Gaps = 49/311 (15%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQKIN 69 +K + L + +++ +NG+ IT+ DI+ + + ++ Sbjct: 1 MKKMILSSALAFALFQGVSFAETF-------AKVNGDEITEKDIAALMRAMPGVSFAQLP 53 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + + + + I L ++ +K G+ + N Sbjct: 54 QDAKSQVINQAIERKLLIEQAKKDGVEKTKDFKNAL------------------------ 89 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + +V M K + EI K V+ + + Sbjct: 90 -------ESVKDDLALEVWMRQEMEKVRVSDSEIEKFYNDNKTKFVQPEVAKVRHIL--- 139 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + L K + + + G ++ + P+F + Sbjct: 140 -VNSETEAKNIISDVKRAGKNSLAKFEELAKSKSKDGSAQNGGDVGWIARGQVVPEFADA 198 Query: 250 LKK-SQNNTTN-PYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYV 305 K ++ T P TQ G I + DK+ +K + K +++ + Sbjct: 199 AFKLNKGQYTQTPVKTQFGYHVIYVEDKKPTTTLALKDVKGQIEQNLRLMKFQENVKKEG 258 Query: 306 KKLRSNAIIHY 316 ++LR A + Sbjct: 259 QELRKKAKVEI 269 >gi|210623289|ref|ZP_03293706.1| hypothetical protein CLOHIR_01656 [Clostridium hiranonis DSM 13275] gi|210153690|gb|EEA84696.1| hypothetical protein CLOHIR_01656 [Clostridium hiranonis DSM 13275] Length = 333 Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 37/324 (11%), Positives = 93/324 (28%), Gaps = 32/324 (9%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-------------- 66 + + + + + +NG IT G + + K Sbjct: 3 IALAALMSFSLVACKQKDLNETVADVNGTKITLGQYEFMLKMNKDSVESNIGGADKWDEK 62 Query: 67 -----KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 + +++ + ++I L Q EK G+ + + S E+ Sbjct: 63 DQTGVSYKDKYKRLVLDQMINTELLAQNAEKEGLKPT-DKEIQASYNDLKTYVNSDENLK 121 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 ++ GI D K+ I + + + + + + E Sbjct: 122 GAAEELGINDEFLKEQAKISLLIQKSQEKFYKEEKVTDAEMKKYYDEHIDEYKKDEVEAS 181 Query: 182 TVLFSIPDNKL-----QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQ 235 +L D++ +Q + + K + +K++ + G Sbjct: 182 HILIKTTDDQNKPLPEADQKKAKAKAKKVLKEVKAGGDFAELAKKYSQDPGSAANGGALG 241 Query: 236 YLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDK-RDLGGEIALKAYLSAQNT 293 + + +F++ ++ T G I + D+ ++ KA + + Sbjct: 242 AFGKGMMVQEFEDAAFGMEPGEVSDLVKTDFGYHIIKVTDRIKETTSFEEAKAGIKEEIL 301 Query: 294 PTKIEKHEAEYVKKLRSNAIIHYY 317 K + + L+ A I + Sbjct: 302 KNKYGEK----IAALQKKAKIEKF 321 >gi|293375521|ref|ZP_06621798.1| peptidylprolyl isomerase PrsA1 family protein [Turicibacter sanguinis PC909] gi|325840213|ref|ZP_08166980.1| peptidylprolyl isomerase PrsA1 family protein [Turicibacter sp. HGF1] gi|292645861|gb|EFF63894.1| peptidylprolyl isomerase PrsA1 family protein [Turicibacter sanguinis PC909] gi|325490361|gb|EGC92686.1| peptidylprolyl isomerase PrsA1 family protein [Turicibacter sp. HGF1] Length = 239 Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 32/277 (11%), Positives = 82/277 (29%), Gaps = 42/277 (15%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 S++ + IT+ +++ I L+ Q+ + Q+L+ E + +Q + + I Sbjct: 2 SKVLAKVKNYEITEEMLNETIDALRAQQNINLTTEEQKQDLLDELVARQLVVEDAI---- 57 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + G+ + Q L + I+ + F Sbjct: 58 --------------------------ESGLTETEEFQKLYREFIFQHSIGQMF-KTINVT 90 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + E A + ++ E + + + + +D Sbjct: 91 DAECEAYYNENQDQFKEETVRAAHILVDE----------EAKAEDLLNQINEGADFHQLA 140 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + +S G + P+F+ + + +Q G I + DK++ Sbjct: 141 SEHSSCPSGARGGDLGDFGRGQMVPEFEQAAFALNIGEISGVVKSQFGYHLIKLLDKKET 200 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + K + + + + L+S + Sbjct: 201 VPFTDVLPQIKQYLVTKKQNEMYSAFTQGLKSKYTVE 237 >gi|126725343|ref|ZP_01741185.1| PPIC-type PPIASE domain [Rhodobacterales bacterium HTCC2150] gi|126704547|gb|EBA03638.1| PPIC-type PPIASE domain [Rhodobacterales bacterium HTCC2150] Length = 407 Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 36/263 (13%), Positives = 92/263 (34%), Gaps = 3/263 (1%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + V+ I P + + T++ +T +I +R A L + + G + K Sbjct: 5 IKKILVIGALLIAPAQISLAQSNPFAAAVTVDNRAVTYFEIEQRAAFLDVLRAPGNVLKT 64 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A + L+ E L+ + GI + + + A+ L +F + + GI F+ Sbjct: 65 ARETLVNERLQLNAAQSLGIQINQEELAVGMAEFAKRANLKTAEFIKAIGQDGIEPETFQ 124 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 ++ W +V+N F+ + E EI L+ ++ + + Sbjct: 125 DFVRAGLTWRKLVQNRFVGRAQVSEDEIDRALALSSRKGGARVLLSEIVLPARNPEEA-- 182 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQ 254 + + +++ + ++ + G+ +L ++L P + L Sbjct: 183 EASKNLAAELKDTIKTQSAFESAARTYSVSGSAANGGRITWLPLANLPPSIVPVLLTLKP 242 Query: 255 NNTTNPYVTQKGVEYIAICDKRD 277 ++ + + + ++ Sbjct: 243 GEVSDTVPVENAISMFQVRGLQE 265 Score = 39.3 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 1/64 (1%) Query: 252 KSQNNTTNPYVTQKGVEYIAIC-DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 +N + G + + R + + A +IE + Y++ LR+ Sbjct: 341 MDKNEISTSLRRNNGTALLFVMMCGRTPELTEGSRDEMRASLINRRIETYANNYLEDLRA 400 Query: 311 NAII 314 ++II Sbjct: 401 DSII 404 >gi|260428957|ref|ZP_05782934.1| ppic-type ppiase domain protein [Citreicella sp. SE45] gi|260419580|gb|EEX12833.1| ppic-type ppiase domain protein [Citreicella sp. SE45] Length = 282 Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 31/288 (10%), Positives = 81/288 (28%), Gaps = 50/288 (17%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKK 87 + + T+NG+ IT G I ++ Q + L + +++ +T+ Sbjct: 20 PAQAEEMDLDSVVATVNGQDITLGHMLVIRAQLPEQYQQLGDEVLWDGILDQIVQQTVLA 79 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 Q+ ++ + +V Sbjct: 80 QDDR---------------------------------AEETKRVTLSLDNERRSLMAAEV 106 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 V++ + ++ + + +E+ +L ++ + E Sbjct: 107 VQSIANDAVSDEAVQAAYDAEYATAELGKEFNASHIL-----------VETEEEAQALIE 155 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKG 266 + ++ + G+ + + FQ + S + + P TQ G Sbjct: 156 ELNGGADFAELAKTKSTGPSGPNGGELGWFGPGMMVEPFQAAVEQMSVGDISAPVQTQFG 215 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I + D+R+ E + A ++ Y+ + A + Sbjct: 216 WHVIKLNDERNK--EAPQLEEVRADIELKLQQEAVQNYIDEKLGAAEV 261 >gi|325526358|gb|EGD03958.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. TJI49] Length = 287 Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 37/286 (12%), Positives = 77/286 (26%), Gaps = 30/286 (10%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94 + A + +T DI+ + L E ++ Sbjct: 13 AVAAQDDVIANAAQASVTQSDIATLLKSLG------------------------EEGRTR 48 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 + D ++ + AE + DKQ +Q + + + Sbjct: 49 LAADPAAMDQVVRATLAQKAVLAEAKAKGWDKQADVQAAIEQARRDIIVRSYLASVNAPP 108 Query: 155 KYGNLEMEIPANKQKMKNITVREY--LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 + EI + + + + ++P N ++ SR R Sbjct: 109 ADYPSDAEIQTVYDQNRAAFTAPRALHVAQIYIAVPPNADAATVDKARKQAADLASRARN 168 Query: 213 PKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + + + G ++ E L P + + P T G + Sbjct: 169 GDFAALAKANSQDKASAANGGDMGFVPEPMLVPAVRQAADALKPGQVSGPIQTPTGFHVV 228 Query: 271 AICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + D R +K + A + ++ Y+ KL NA I Sbjct: 229 KLIDVRAAAPRPLADVKERVRAMLRAQRTQQGAQAYLAKLGGNAPI 274 >gi|294650562|ref|ZP_06727919.1| peptidyl-prolyl cis-trans isomerase SurA [Acinetobacter haemolyticus ATCC 19194] gi|292823559|gb|EFF82405.1| peptidyl-prolyl cis-trans isomerase SurA [Acinetobacter haemolyticus ATCC 19194] Length = 437 Score = 96.7 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 98/311 (31%), Gaps = 18/311 (5%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA----LLKLQKI----N 69 + ++ ++ + + + ++ VI D+ + IA LK Q Sbjct: 9 IFRATVLAALISSSMHSFAQPADEVVAIVDSSVILKSDLVQGIAEAEHQLKAQNQTVPPK 68 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSSFLDKQ 127 L+ + +LI+ + +++++ GI D N++N ++ A +G + + Sbjct: 69 QYLQMQVLDQLIIRQAQLEQVKRYGIKPDENSLNAAVLRVANQSGSNSLSAFQQKLDAIA 128 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + + +A + + M + + ++ +K+ + L V Sbjct: 129 PGTYENLRNRIAEDLAIGRLRQQQVMSRIKISDHDVENF---LKSPEGQAALGTQVHVLH 185 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 N VQK ++ S K ++ V + S++ + Sbjct: 186 MRISGTNNNEVQKVAEEVRRSLATSNDPKAISSKLSTGTVTVDGADMGFRALSEIPTELA 245 Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRD----LGGEIALKAYLSAQNTPTKIEKHEA 302 + TT + G + + +++ ++ Q + Sbjct: 246 ARVTPLQVGQTTGLVNVRDGTHVLKLLERKQNDQRALVPQYKTRHILIQTSEVVSSDRAK 305 Query: 303 EYVKKLRSNAI 313 + + L + Sbjct: 306 QMIDSLYNRIK 316 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 49/142 (34%), Gaps = 3/142 (2%) Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY 236 +T I +++ + ++ I F++ G + Sbjct: 284 PQYKTRHILIQTSEVVSSDRAKQMIDSLYNRIKAGEDFSTLAATFSNDPGSARDGGNLGW 343 Query: 237 LLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQNTP 294 + S + P+F+ ++K+ + P+ +Q G + + D R + + Sbjct: 344 VNASVMVPEFEKVMKEIPVGQLSEPFQSQFGWHILEVTDTRQQDMTKEAQERMARQILGE 403 Query: 295 TKIEKHEAEYVKKLRSNAIIHY 316 + E + ++LR+NA + Sbjct: 404 RQFETEVDSWTRELRANAYVEI 425 >gi|222087317|ref|YP_002545854.1| peptidyl prolyl cis-trans isomerase D signal peptide protein [Agrobacterium radiobacter K84] gi|221724765|gb|ACM27921.1| peptidyl prolyl cis-trans isomerase D signal peptide protein [Agrobacterium radiobacter K84] Length = 300 Score = 96.7 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 74/303 (24%), Gaps = 49/303 (16%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL---KLQKINGELE 73 F + + A + + I ++ IA L Q + + + Sbjct: 7 LAAVAFATFVTLHAPVFADDAK-DPVVAKVGDVEIHQSELDLAIANLDPQLGQLPDDQKK 65 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 A+ I L A+D ++ Q Sbjct: 66 VAALSASIDVKLL------------------------------AKDAAAEKLDQTPDFQS 95 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 YL + + K + E++ +K+ E R +L D Sbjct: 96 HMAYLRDRELHNAYFKAHVADGITDDEVKARYDKEVAALPKQEEVHARHILVKTEDEAKA 155 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 + ++ ++ + G Y + +F++ Sbjct: 156 IIKELDA-----------GKDFATLAKEKSTDPNKADGGDLGYFAHGRMVKEFEDAAFAL 204 Query: 254 Q-NNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 T P + G I + DKR + Q + E + K + N Sbjct: 205 PVGTYTKTPVKSDFGWHVIKVEDKRVAPP--PPFDQVKDQVRQLVMRDKYLELLNKAKQN 262 Query: 312 AII 314 + Sbjct: 263 TKV 265 >gi|118443543|ref|YP_877117.1| peptidylprolyl isomerase [Clostridium novyi NT] gi|118133999|gb|ABK61043.1| parvulin-like peptidyl-prolyl isomerase [Clostridium novyi NT] Length = 348 Score = 96.7 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 39/344 (11%), Positives = 98/344 (28%), Gaps = 33/344 (9%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK------- 58 ++ + + + ++ A++ + + + IT G++ Sbjct: 1 MKNIRKLVATVAVCVFSMSAVGCSMIEKTPEAINKTVVAKVGDKKITKGELDSNFAVKRY 60 Query: 59 ----------------RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++ Q ++++A QE + + +K + T Sbjct: 61 EEQFKAQYGDKYAENPQVKEQLKQVKVATVQQMAAQEALKQEAEKLGLVPKEAELKKETD 120 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 S E+F L G F+ + I + +N+ E E Sbjct: 121 KKIQEMKKEQNIKSNEEFEKMLKASGFTKEGFESLVRDNIILEKL-QNELTKNVKVDEKE 179 Query: 163 IPANKQKMKNITVREYLI----RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + + K+ ++ + ++ + IK +E + + Sbjct: 180 MQKYYETHKDKYPKDVKNPTKVHLAHIILQPKSQEDLAKCESEIKSIKEELNKGAEFSVL 239 Query: 219 LEKFASKIHDVSIGKAQYLL---ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 +K++ G + + L + P TQ G I + K Sbjct: 240 AKKYSQDGSKEKGGDLGTVPTVDSGFDEQFMEAALPLKDGQISEPVKTQFGYHIIKMIKK 299 Query: 276 --RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + +K ++ K K + K+++ NA + + Sbjct: 300 EVKPCKTFAEVKNEINKFLLEEKKGKIIKDKFKQIQDNAKVKVF 343 >gi|56479153|ref|YP_160742.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aromatoleum aromaticum EbN1] gi|56315196|emb|CAI09841.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aromatoleum aromaticum EbN1] Length = 260 Score = 96.7 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 72/284 (25%), Gaps = 47/284 (16%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKS 93 A ++ T+NG I + I Q EL + A ++L+ + QE + Sbjct: 20 AAGAATPVATVNGAPIPSSRMDVMINEQHAQGAPDGAELREAAREQLVRLEVLAQEAARK 79 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 GI + +++ Sbjct: 80 GIDKKPEIQAQ------------------------------MDLARQGVLIRAYMQDFVK 109 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + + +EY R +L ++ K Sbjct: 110 TNPATDADLRKEYESIKGQMGSKEYKPRHIL-----------VETEEEAKAIIGKLRAGE 158 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIA 271 K G+ + F + ++K + + P + G I Sbjct: 159 KFEALATASKDPGSKDKGGELGWSNPGMFVKPFSEAMVKLEKGQYSATPVKSDFGYHVIQ 218 Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + D RDL + Q +K ++V LR+ A + Sbjct: 219 LDDVRDLKA--PAFEEVKPQLEQRLQQKKIEKHVADLRAKAKVE 260 >gi|332992311|gb|AEF02366.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Alteromonas sp. SN2] Length = 630 Score = 96.3 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 49/408 (12%), Positives = 104/408 (25%), Gaps = 96/408 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ + +++ F + SY + + T+NGE I+ ++ + Sbjct: 1 MLERIREGSQGPWAMAIIALIVLSFVFAGVGSYL-TSSGTTAVATVNGEEISAQELERGY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + Q + + + + LI E L +Q+ ++ G+ + Sbjct: 60 QNQRAQMESQFGESIAQLFSSEQYLSDFRRNVLDRLIAEKLIQQQAQEMGLRVSDAQIRE 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 VQ + F + L + G F+ YL IQ + Sbjct: 120 TIVQMPEFQFGGQFDNDRFQTILRQNGFQVADFRDYLRIQMTQNQLAAALTNSEFALPGE 179 Query: 149 --------------------KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT------ 182 F E +I E I+ Sbjct: 180 AERANALQLQTRDAKYVMIDSASFAESVEVTEDDIAEYYNANITAFDTEEQIKLAYVSLT 239 Query: 183 -------------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA------ 223 + + DN L G ++R D K + A Sbjct: 240 VEDVKSRVSVDDEAVRTYYDNNLSGYGKEEERRVSHILIESGDDADAAKAKTQALLDQLN 299 Query: 224 --------------SKIHDVSIGKAQYLLESDLHPQFQNLLKK--SQNNTTNPYVTQKGV 267 + G ++ + F + + + T+ T+ G Sbjct: 300 DGADFAELAENNSDDTFSAENGGDLDFITPGMMDDAFDEAVFSLANVGDYTDVVETEFGF 359 Query: 268 EYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 I + + ++ ++A + K + E + A Sbjct: 360 HIIKLTELKEAQVQAFEDVEAEIRETLLTDKALEEFFELQNTMAEIAF 407 >gi|90416122|ref|ZP_01224055.1| peptidyl-prolyl cis-trans isomerase D [marine gamma proteobacterium HTCC2207] gi|90332496|gb|EAS47693.1| peptidyl-prolyl cis-trans isomerase D [marine gamma proteobacterium HTCC2207] Length = 618 Score = 96.3 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 41/395 (10%), Positives = 93/395 (23%), Gaps = 86/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ I + I+F I S + +NGE +T+ + + I Sbjct: 1 MLDSFRHNMKG-IAFGIVILIAIVFAFSGIGSLSMSGSGADTAVIVNGEKVTELSVLRAI 59 Query: 61 ALLKLQKINGE------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + K + +N + V++LI L Q + G+ S T + + Sbjct: 60 SSEKRRILNENEGLDASLLEDELIRPQVVEQLIGRRLLSQAAKSGGMGISSRTTSKLLLG 119 Query: 109 HARNT----GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML---------- 154 + + + QG F + L + V+ Sbjct: 120 TPAFLSEDGRFDQDLYLYTIRAQGYTSGTFLEMLRDDLLIEQYVRGFVASGFVTASELDL 179 Query: 155 -----------------------KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + +I + + + Sbjct: 180 IASITEQQRSYYYLTLPLQPAVDAVDLSDEQIATYYEDNNQRYQAPEQVIIDYIELNPEL 239 Query: 192 LQNQGFVQKRIK---------------------------------DAEESRLRLPKDCNK 218 V + + E Sbjct: 240 FSATQSVAEEQILARYEEQRDSLESTTSRQAAHILLAQPSDDVLAEINEKLAAGEAFEAL 299 Query: 219 LEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276 ++++ + G Y F+ L+ + P T G+ I + D + Sbjct: 300 AKEYSEDVGSADFGGDLGYTSGDTFPESFETALEALQVGEVSPPVSTDSGIHLIKLLDIQ 359 Query: 277 DLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRS 310 + + +A + + + E + L+ Sbjct: 360 EKIVDFDSERARIEQELVTELTDVWLVEKLANLKE 394 >gi|293608269|ref|ZP_06690572.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828842|gb|EFF87204.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 441 Score = 96.3 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 102/314 (32%), Gaps = 20/314 (6%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIA----LLKLQK- 67 K L +F + S S+A + + ++ VI D+ + +A L+ QK Sbjct: 9 KHLKQFFKATTLAALISSSMHSFAQPADEVVAIVDNSVILKSDLQQGMAEAAHELQAQKK 68 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSS 122 L+ + +LI+ + ++++K GI D ++N ++ A +G Sbjct: 69 EVPPQQYLQFQVLDQLILREAQLEQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQK 128 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + +A + + M + + ++ + + Sbjct: 129 LDAMAPGTYESLRNRIAEDLAISRLRQQQVMSRIKISDQDVENFLKSPQGQAALGNQAHV 188 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + I + Q V + ++ + N L+K ++ V + SD+ Sbjct: 189 IHMRISGDNAQEVQSVAQEVRSKLAQSNDI----NALKKLSTANVKVEGADMGFRPLSDI 244 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD----LGGEIALKAYLSAQNTPTKI 297 + + TT+ + GV + + +++ ++ Q + Sbjct: 245 PAELAARITPLQDGQTTDLVSVRDGVHVLKLLERKQNEQKALVPQFQTRHILIQPSEVVT 304 Query: 298 EKHEAEYVKKLRSN 311 ++ + + + Sbjct: 305 LENAKQIIDNIYKR 318 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 28/270 (10%), Positives = 88/270 (32%), Gaps = 6/270 (2%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 I+D D+ + + Q G + + + ++ + + N Sbjct: 163 KISDQDVENFLKSPQGQAALGNQAHVIHMRISGDNAQEVQSVAQEVRSKLAQSND-INAL 221 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + + + + + + + + D + I + + ++ G +++ KQ Sbjct: 222 KKLSTANVKVEGADMGFRPLSDIPAELAARITPLQDGQTTDLVSVRDGVHVLKLLERKQN 281 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HD 228 + V ++ R +L + ++ I + + +++ Sbjct: 282 EQKALVPQFQTRHILIQPSEVVTLENA--KQIIDNIYKRLKAGQDFATLAATYSNDTGSA 339 Query: 229 VSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKA 286 G ++ + P+F + + + + P+ TQ G + + DKR+ + Sbjct: 340 RDGGSLGWVTPGMMVPEFDKQMQEIPVGEISEPFQTQFGWHILQVTDKREKDMTHEYQER 399 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +++++R+NA + Sbjct: 400 MARQILGERQFNTEIDSWLREVRANAYVEI 429 >gi|253681183|ref|ZP_04861984.1| peptidil-prolyl cis-trans isomerase [Clostridium botulinum D str. 1873] gi|253562619|gb|EES92067.1| peptidil-prolyl cis-trans isomerase [Clostridium botulinum D str. 1873] Length = 246 Score = 96.3 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 31/285 (10%), Positives = 78/285 (27%), Gaps = 47/285 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQELIVETLKKQEIEKS 93 M +++ +NG+ IT+ DI I ++ + K + +L+ K Sbjct: 1 MENKVLAKVNGKEITERDIEVAIKRFPQERQAYFAGEQGRKQLLDQLVA-FELFYAYGKE 59 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + ++ + N + Sbjct: 60 NELDKTQEFIDGIEIMKKD------------------------------ALTQMSVNKVL 89 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + + E+ K V + + + +L N+ + + Sbjct: 90 SEVKVTDKEVEDYYTANKKNFVVGETVSAKHILVDNEELANKIAEKIK---------DGM 140 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 +++++ G + P+F+ + P TQ G I + Sbjct: 141 SFDEAAKEYSTCPSKAQGGNLGRFGRGQMVPEFEEAAFNLEIGKLSEPVKTQFGYHLIEV 200 Query: 273 CDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 DK + +K + A + +V++L++ + Sbjct: 201 EDKNEATEKSFNEVKDMIKANLIQQRQTAKYTTFVEELKNKYNVE 245 >gi|325121999|gb|ADY81522.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter calcoaceticus PHEA-2] Length = 436 Score = 96.3 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 102/314 (32%), Gaps = 20/314 (6%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIA----LLKLQK- 67 K L +F + S S+A + + ++ VI D+ + +A L+ QK Sbjct: 4 KHLKQFFKATTLAALISSSMHSFAQPADEVVAIVDNSVILKSDLQQGMAEAAHELQAQKK 63 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSS 122 L+ + +LI+ + ++++K GI D ++N ++ A +G Sbjct: 64 EVPPQQYLQFQVLDQLILREAQLEQVKKYGIKPDEKSLNEAVLKVAGQSGSKSLEAFQQK 123 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + +A + + M + + ++ + + Sbjct: 124 LDAMAPGTYESLRGRIAEDLAISRLRQQQVMSRIKISDQDVENFLKSPQGQAALGNQAHV 183 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + I + Q V K ++ + N L+K ++ V + SD+ Sbjct: 184 IHMRISGDNAQEVQSVAKEVRSKLAQSNDI----NALKKLSTANVKVEGADMGFRPLSDI 239 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD----LGGEIALKAYLSAQNTPTKI 297 + + TT+ + GV + + +++ ++ Q + Sbjct: 240 PTELAARITPLQDGQTTDLVSVRDGVHVLKLLERKQNEQKALVPQFQTRHILIQPSEVVT 299 Query: 298 EKHEAEYVKKLRSN 311 ++ + + + Sbjct: 300 LENAKQIIDNIYKR 313 Score = 87.4 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 28/270 (10%), Positives = 88/270 (32%), Gaps = 6/270 (2%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 I+D D+ + + Q G + + + ++ + + N Sbjct: 158 KISDQDVENFLKSPQGQAALGNQAHVIHMRISGDNAQEVQSVAKEVRSKLAQSND-INAL 216 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + + + + + + + + D + I + + ++ G +++ KQ Sbjct: 217 KKLSTANVKVEGADMGFRPLSDIPTELAARITPLQDGQTTDLVSVRDGVHVLKLLERKQN 276 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HD 228 + V ++ R +L + ++ I + + +++ Sbjct: 277 EQKALVPQFQTRHILIQPSEVVTLENA--KQIIDNIYKRLKAGQDFATLAATYSNDTGSA 334 Query: 229 VSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKA 286 G ++ + P+F + + + + P+ TQ G + + DKR+ + Sbjct: 335 RDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHILQVTDKREKDMTHEYQER 394 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +++++R+NA + Sbjct: 395 MARQILGERQFNTEIDSWLREVRANAYVEI 424 >gi|163743876|ref|ZP_02151247.1| PPIC-type PPIASE domain protein [Phaeobacter gallaeciensis 2.10] gi|161382817|gb|EDQ07215.1| PPIC-type PPIASE domain protein [Phaeobacter gallaeciensis 2.10] Length = 172 Score = 96.3 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 39/120 (32%), Gaps = 3/120 (2%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QN 255 ++ D + ++ + G+ + + + P+F+ + Sbjct: 35 ETEEDAADIRAELDAGADFATLARERSTGPSGPNGGELGWFSKGRMVPEFEEAVLVMGAG 94 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + ++P TQ G I + D+R + + ++ + V L + A I Sbjct: 95 DVSDPVQTQFGWHVIKLNDRRTSAA--PTFDEVREELATQMRQEAVEDRVLSLTTAATIE 152 >gi|83644983|ref|YP_433418.1| parvulin-like peptidyl-prolyl isomerase [Hahella chejuensis KCTC 2396] gi|83633026|gb|ABC28993.1| Parvulin-like peptidyl-prolyl isomerase [Hahella chejuensis KCTC 2396] Length = 628 Score = 96.3 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 46/403 (11%), Positives = 102/403 (25%), Gaps = 93/403 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + I + +++ F + S ++NGE IT ++ Sbjct: 1 MLQNIRDNAQGVIAKVIVGLIVMTFAFFGVESIVGGLSGEPEVASVNGEPITKSQFERKF 60 Query: 61 ALLKLQK-------------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 +LQ +L K + E I ++ Q ++G T+N F Sbjct: 61 ERNRLQAIAGMGENYDPSKIDENKLRKTTLDEFITREVQLQAAREAGFAVSDATINNFIT 120 Query: 108 QH---ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK--------------- 149 Q ++ F L + G+ F++ L+ + + + Sbjct: 121 QWPMAQKDGKYDNNQFMEALRRIGMRPMEFRKELSDELLVGQLQSGIAQTSFVIGEELNE 180 Query: 150 ------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 D + E K+ + I + + Sbjct: 181 LLRMERQTRSFSYYRLNAEDVAKDIEISDAEAEEYYNSNKDEFILPERIIVNYIELTRDA 240 Query: 192 LQNQGFV---------------------QKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 L + V ++ E+ + + + + Sbjct: 241 LVGRAEVSDEEVSERYEQEKKEFLPSEQRRASHILIETSDDVSDEQALAKAQEVEQKLKD 300 Query: 231 IGK--------------------AQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269 G Y + F+ + + + P T+ G Sbjct: 301 GGDFAALAKEFSSDLGSANDGGDLGYAQKGAFVEPFEEKLFSMNVGDISEPVKTEYGYHI 360 Query: 270 IAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 I + D + ++ K + + K + E KL+ Sbjct: 361 IKLNDVKAVEMPSLEESKDRIVKELQEQKADSLFVEVNAKLKD 403 Score = 37.0 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 24/72 (33%), Gaps = 2/72 (2%) Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAE 303 F+ + + T G I + + +D + A + ++ + Sbjct: 555 FKLPKPEEGKPVIEKFETNFGYAVIVLNEVKDNTEDLSEAEQKTYRTFMASRNGQREYND 614 Query: 304 YVKKLRSNAIIH 315 Y +K++ A I Sbjct: 615 YNEKIQDAAEIE 626 >gi|89073234|ref|ZP_01159764.1| putative peptidyl-prolyl cis-trans isomerase D [Photobacterium sp. SKA34] gi|89050944|gb|EAR56408.1| putative peptidyl-prolyl cis-trans isomerase D [Photobacterium sp. SKA34] Length = 630 Score = 96.3 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 41/406 (10%), Positives = 101/406 (24%), Gaps = 94/406 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ + + ++ F + SY + + +N + I+ + Sbjct: 1 MMERLREGANSIWVKIILSLIIFSFVFAGVGSYLAGGNEQ-VAAKVNDKEISQRAFEQAY 59 Query: 61 ----------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 L+ + ++ ++ + L +Q + G+ V Sbjct: 60 QNQRNQMQQRLGDYFSKLMGDPAYVQQFRNSVLERMVNDELIEQRATELGLGVSDAQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 V + E ++ L + G F + + + + Sbjct: 120 AIVAMPAFQVDGVFNNEQYNLTLRRAGFSPEQFAESIRKDMLRQQFLSALEGSDFALNNE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 DF K + E A K K R ++ + Sbjct: 180 LNELRKLESQERVVRTLKLNLADFTDKVTVTDKEAKAYYDKNKTQFTRPAQVKVSYIELS 239 Query: 189 DNKLQNQGFVQKRIKDAEESRLR------------------------------------L 212 D L N + + +A + + Sbjct: 240 DKNLVNNIKITDKETEAYYNEHKSKYSTAEKIQVSHILVKGDSDTSKAKAEALLAELKGG 299 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK--SQNNTTNPYVTQKGVEY 269 + +K + GK + + + P F+ + + + G Sbjct: 300 ANFADVAKKSSDDTFSAKDGGKLDWFGKGVMDPAFEEAAFSLAKPGDMSGLVKSSFGYHI 359 Query: 270 IAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 I + + + +KA + A+ ++ + + KL A Sbjct: 360 ILLDGIEEPKVKPFADVKASIVAELQEQQVAEQFYKLQSKLAETAF 405 >gi|229816170|ref|ZP_04446480.1| hypothetical protein COLINT_03217 [Collinsella intestinalis DSM 13280] gi|229808178|gb|EEP43970.1| hypothetical protein COLINT_03217 [Collinsella intestinalis DSM 13280] Length = 401 Score = 96.3 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 38/348 (10%), Positives = 107/348 (30%), Gaps = 40/348 (11%) Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI------------RTTINGEVITDG 54 LS K++ + I+ ++ + + + + + T+NG I + Sbjct: 31 EKLSKTAKIVLVA-IGILAMLLSVTAMACSGVLNEVNKEEPYELTGGVAATVNGVNIKED 89 Query: 55 DISKRIALLK----------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98 ++ +I L+ + + + + L + ++ GIT Sbjct: 90 TVTNQIMSLRTGSYDKDADWAAYLASQGLTPESYRENVIDGIARQYLLVEAEKEYGITVS 149 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 ++ + +N G + F +++ G + + + + + K++ Sbjct: 150 QEDLDKAWKDAVKNYGGDEKAFVEMIEQVGFTKDTYLENIKSSLAQQKL-KDEVAPAEKP 208 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK--DC 216 + EI + + +LF + ++ Q + ++ + Sbjct: 209 SDEEIITYLNENLSTYNGARRSSHILFKVAEDATDEQRAKVEAEAQKVLDQINAGEIEFA 268 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK 275 +K++ G + + P++Q+ L K + + T G I + Sbjct: 269 KAAKKYSEDSSADKGGDVGWDKLTTFVPEYQDALSKLGVDQVSGLVKTTYGYHIIKCTEL 328 Query: 276 RDL-------GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ ++ Y+S + E++ A I Sbjct: 329 FEVQAVTSLDEVPEGIRTYVSDMLESQAVATAYGEWLTDYTEKAEIKI 376 >gi|89052781|ref|YP_508232.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Jannaschia sp. CCS1] gi|88862330|gb|ABD53207.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Jannaschia sp. CCS1] Length = 301 Score = 96.3 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 30/281 (10%), Positives = 79/281 (28%), Gaps = 50/281 (17%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKL---QKINGELEKIAVQELIVETLKKQEIEKSG 94 + + T+NG IT G + +L Q + L + +++LI + + Sbjct: 47 SAETVMATVNGHDITVGHLIAMRQMLPAEYQQLPDEVLFEGMLEQLIQQQVLA------- 99 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 + + + + M Sbjct: 100 --------------------------DVAEANVTREMELLLENEQRALMAATYMDDIAMA 133 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + G E++ ++ + EY +L ++ ++ + Sbjct: 134 ELGEEELQAAYDEAYGEVEPTVEYNAAHIL-----------VEGEEDAQNLLTALGEGAD 182 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC 273 + + + G + E + P+F+ + + ++P TQ G + + Sbjct: 183 FAELAAENSIGPSGPNGGALGWFTEGMMVPEFEAAVMELEPGEVSSPVQTQFGWHVVLLN 242 Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + R+ + + T +++L + A I Sbjct: 243 ETREQAA--PTLDDVRPELEETIRRGRVDARLEELMAEAEI 281 >gi|317403066|gb|EFV83601.1| peptidyl-prolyl cis-trans isomerase D [Achromobacter xylosoxidans C54] Length = 656 Score = 96.3 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 43/408 (10%), Positives = 104/408 (25%), Gaps = 98/408 (24%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +++ + ++ F +V I Y+S+ T+ G+ I+ + + Sbjct: 1 MFEFIRSH-RRWMQFILLLLIVPSFFLVGIQGYESFMRKEPELATVAGQPISRAEFDQAH 59 Query: 61 ALLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSN---TVNY 104 Q +L + + +LI + L + + Sbjct: 60 RNQLEQYRQRLGAQFDPAVIDTPQLREALLNQLINQRLLANVAVDNRFSVSDETLRNTIA 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK--------------- 149 + N S E + L QG+ F+ L V++ Sbjct: 120 AIPEVQDNGRFSPERYRQVLAAQGMSPTSFEAGLRRDLAVARVLEPVGQSARAPAEVVAS 179 Query: 150 ------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 DF + +I A K ++ + + Sbjct: 180 LETALTQQRTVQLRRFAAADFRSQVTVTPADIQAWYDANKQQLQVPEQVQVQYLVLNEAA 239 Query: 192 LQNQGFVQKRI--KDAEESRLRLPKDC--------------------------------- 216 V+ E+++ R + Sbjct: 240 ATEGVQVKDEDLTSYYEQNKNRFGQPERRRASHIMIEVPAGASEDARKAARAKAEALATQ 299 Query: 217 -----NKLEKFASKIH-----DVSIGKAQYLLESDLH-PQFQNLLKKSQNNTTNPYVTQK 265 + + A K + G +L L P + + +S++ + + Sbjct: 300 AAANPAQFAELARKNSQDAGSAANGGDLGWLAPGMLSGPLEKAIFSQSKDQVSGVVESPS 359 Query: 266 GVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 G + + + + +K ++A+ +E +L Sbjct: 360 GFHVVKVTEIQPAAIKPLAEVKDQITAEVRKQLAAVRFSEMASQLNKQ 407 >gi|325274293|ref|ZP_08140404.1| periplasmic folding chaperone [Pseudomonas sp. TJI-51] gi|324100576|gb|EGB98311.1| periplasmic folding chaperone [Pseudomonas sp. TJI-51] Length = 623 Score = 96.3 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 48/402 (11%), Positives = 117/402 (29%), Gaps = 89/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++++ + + A S+ +NG+ I+ ++S+ Sbjct: 1 MLQNIRDNSQGWIAKSIIGLIVVLMALTGFEAIFQAATHSQDAAKVNGQTISQNELSQAA 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q + L + A++ LI L Q E + F ++ Sbjct: 61 DMQRRQLMQQLGKDFDPALLDEKLLREEALKGLISRKLLLQGAEDAKFAFSDAALDQVIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML---------- 154 + + SA+ F + + G G F+ LA + + + Sbjct: 121 QTPEFQVDGKFSADRFDQVIRQMGYGRMQFRDMLAEEMLIGQLRTGLAGSSFVTDQQVDA 180 Query: 155 -----------------------KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 K + E++ ++ + ++ + +I + Sbjct: 181 FARLEKQTRDFASLTFKADPAAVKVSDAEVKAHYDQHAKEFMSPDQVVIDYIELKKSAYF 240 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKL-------------------------------- 219 Q + ++ E+ L + + Sbjct: 241 DQVKVTDEELKAQYEKEIANLAEQRHAAHILIEVNDKVSDAQAKARAEEIEQRLAKGENF 300 Query: 220 ----EKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 ++F+ + G + P F+ K + P TQ G I + Sbjct: 301 ATLAKEFSQDPGSAGNGGDLGFAGPGVYDPAFEEALYKLQDGQVSAPVRTQFGYHLIKLL 360 Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ +LK L+ +E+ + K+L+ A Sbjct: 361 GVQAPEVPSFASLKDKLTRDLKTPLVEQRYVDASKQLQDAAY 402 >gi|148977892|ref|ZP_01814445.1| peptidyl-prolyl cis-trans isomerse D [Vibrionales bacterium SWAT-3] gi|145962838|gb|EDK28110.1| peptidyl-prolyl cis-trans isomerse D [Vibrionales bacterium SWAT-3] Length = 621 Score = 96.3 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 35/403 (8%), Positives = 95/403 (23%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY + + I G+ + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYI-TGGGNNAAAKVGNTEIGRGEFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + K + +I + L +Q+ E G+ + + Sbjct: 60 QNERNRMQSQLGDYFAQMLADPAYVESFRKSVLDRMINDVLLEQQAESLGLRISDSQIRT 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 ++ + E + + L + G F +Y+ + +V Sbjct: 120 MILEMPQFQTAGQFDQEVYQAALRRAGFSAESFAEYMRRDLMRNQLVTALQGSEFVLQGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 D + +I + R + Sbjct: 180 IDTQSKLIAQTRDIRTVTLSVADLAKDVELTDEQIEQYYTENPLAYTRPEQAKVSYIELS 239 Query: 185 ---------------FSIPDNKLQNQGFVQKRIKDAE--------------ESRLRLPKD 215 L ++R + Sbjct: 240 AEALKSQLEVSDEEAQKYYQEHLDKYSTAEQRKVSHILVEGDDEAKAQSILDELNAGTDF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 E+ + G ++ + P F++ ++ +TT + G I + Sbjct: 300 ATLAEEKSDDFGSADVGGDLGWIERDVMDPAFEDAAFALQNVGDTTGLVKSDFGYHIIKL 359 Query: 273 CDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + + + A + + E +L A Sbjct: 360 DELKAPESQPYAEVAAEIKQELLDQHAVDQFYEMQTELEKVAF 402 >gi|331268339|ref|YP_004394831.1| parvulin-like peptidyl-prolyl isomerase [Clostridium botulinum BKT015925] gi|329124889|gb|AEB74834.1| parvulin-like peptidyl-prolyl isomerase [Clostridium botulinum BKT015925] Length = 348 Score = 95.9 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 36/344 (10%), Positives = 93/344 (27%), Gaps = 33/344 (9%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK------- 58 ++ + + ++ A+ + + + IT G++ Sbjct: 1 MKNIRKLVATAVLCVFTMSAVGCSMIEKTPEAIKKTVVAKVGDKKITKGELDSHFGVKRY 60 Query: 59 ----------------RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++ Q ++IA QE + + +K ++ + Sbjct: 61 LDQFKQQYGENFEQNPQVKEQVKQIKIAVAKQIASQEALKQEAEKLKLVPNDQELKKEMD 120 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + S L G+ + F++ + I + +N+ + E Sbjct: 121 KKIQEFKKEQNIKDDKGLDSALKMSGLQKSDFEKLIKDNIIIEKL-QNELTKNIKVDDKE 179 Query: 163 IPANKQKMKNITVREYLI----RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 I K+ ++ + ++ + IK +E + Sbjct: 180 IEKYYNTNKDKYPKDPKNPTKIHVAHIILQAKTPEDDAKAKDEIKSIKEELNKGGDFAVL 239 Query: 219 LEKFASKIHDVSIGKAQ---YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 +K++ G + L ++P TQ G I + + Sbjct: 240 AKKYSQDGSKDKGGDLGSVPTVNSGFDQDFMNAALTLKDGQISDPVKTQFGYHIIKMIKR 299 Query: 276 RDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + +K + K + K+++ A I Y Sbjct: 300 EEAPCKTLAEVKNQVKEDILQNKKNEVIKNKFKEIQDKANIKIY 343 >gi|322437244|ref|YP_004219456.1| SurA domain protein [Acidobacterium sp. MP5ACTX9] gi|321164971|gb|ADW70676.1| SurA domain protein [Acidobacterium sp. MP5ACTX9] Length = 377 Score = 95.9 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 95/322 (29%), Gaps = 38/322 (11%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIAL-LKLQKINGELEKIA-------VQELIVE 83 + S+ + T+NG I D+ K L L + + + A +++LI E Sbjct: 47 AGCHPQHSADVMATVNGHAIMRADLDKVYNLQLGEAQQSQPSAEQADSQRLGLLKQLIDE 106 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + +Q K +T + V+ + + E F L ++ + K+ L Sbjct: 107 EIVQQRATKMNLTATNEEVDAKLAEMKA--PYTEEQFDGLLRERHTSVDDIKRDLRRSLT 164 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS------------IPDNK 191 ++ + K + +I + + K+ + + +K Sbjct: 165 MNKLLNKEINSKVTVSDADITSYFNQHKSEFNNIETQYHIARILVTSSPAPQAGNLQGSK 224 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL---HPQFQ 247 Q +K+I + + F+ S G + E+ + F Sbjct: 225 AQTDADAKKKILALKNRVDSGEDFGSLAMNFSEDPQTSASGGDMGSVAETQMKSNPIIFN 284 Query: 248 NLLKKSQNNTTNPYVTQK--------GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 +L T+ G + + G + + + + Sbjct: 285 SLANLKPGQVTDIMPFPDPSDPKKVGGYAIFQLLSRDPAGQHDVSEPQVQQRIRQGLHDA 344 Query: 300 HEA----EYVKKLRSNAIIHYY 317 Y + LR +A + + Sbjct: 345 RSQLLKGAYYEMLRDHAKVENF 366 >gi|306820765|ref|ZP_07454390.1| peptidyl-prolyl cis-trans isomerase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551155|gb|EFM39121.1| peptidyl-prolyl cis-trans isomerase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 245 Score = 95.9 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 72/285 (25%), Gaps = 47/285 (16%) Query: 38 MSSRIRTTINGEVITDGDIS----KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 M ++I TI IT+ D+ + Q E +QELI + L + + S Sbjct: 1 MENKILATIGDMNITEKDLDYMKKNMDKRVLSQFSGERGEYYLLQELINQKLMAIDAKTS 60 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + + + V + Sbjct: 61 DLLNNDEFKFE-------------------------------FESMKDNFISQYVIKTVL 89 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E+ + KN + + D E Sbjct: 90 DSVTVSDEEVREFFETNKNAFGESETVSASHILVGDLSKAESL---------YEKIQNGE 140 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 ++ ++ + G Y + +F+++ + P TQ G I + Sbjct: 141 DFATLAKENSTCPSSANGGDLGYFGRGQMVKEFEDMAFSLEVGAVSKPVKTQFGYHLILL 200 Query: 273 CDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 DK+ +K L K ++ + LR + Sbjct: 201 NDKKADKPKSFEDIKDELRESLFAKKQQEAYVAKINSLREKYGVK 245 >gi|300924168|ref|ZP_07140160.1| PPIC-type PPIASE domain protein [Escherichia coli MS 182-1] gi|301049648|ref|ZP_07196597.1| PPIC-type PPIASE domain protein [Escherichia coli MS 185-1] gi|300298585|gb|EFJ54970.1| PPIC-type PPIASE domain protein [Escherichia coli MS 185-1] gi|300419621|gb|EFK02932.1| PPIC-type PPIASE domain protein [Escherichia coli MS 182-1] Length = 623 Score = 95.9 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 104/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGGMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|330910235|gb|EGH38745.1| peptidyl-prolyl cis-trans isomerase ppiD [Escherichia coli AA86] Length = 623 Score = 95.9 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 39/396 (9%), Positives = 102/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 ++ L++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREAAIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLAGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|311280662|ref|YP_003942893.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterobacter cloacae SCF1] gi|308749857|gb|ADO49609.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterobacter cloacae SCF1] Length = 624 Score = 95.9 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 44/396 (11%), Positives = 105/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + SY ++ +N + I + Sbjct: 1 MMDSLRTAANSVVLKIIFGIIIVSFILTGVSSYL-IGGNNTYAAKVNSQEIGRSQFENAV 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 A + + L + + LI E L Q + G+ V Sbjct: 60 ASERNRMQQQLGDRFSELAANENYMKTLRQQVLNRLIDEALLDQYAKHLGLAISDQQVKQ 119 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF--------- 152 Q N + F+ + + G+ + + Q L Q ++ Sbjct: 120 AIFQTQAFQSNGKFDNDRFNGIVSQMGMTADQYAQALRNQLETQQLINAIVGTDFMLPGE 179 Query: 153 ------------------------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K + EI + ++ KN V R + Sbjct: 180 TEQLATLVSQQRIVREATINVDALAAKQQVSDQEISSYYEQHKNEFVSPEQFRVSYIKLD 239 Query: 189 DNKLQNQG-----------------------------FVQKRIKDAEESRLRLPKDCNKL 219 +Q + K ++ + Sbjct: 240 AAAMQETASDSDIQSYYDQHQEQFTQPERVRYSVIQTKTEADAKAVLDALSKGADFAALA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L S + +N K + + + G + D + Sbjct: 300 KEKSADIISAKNGGDMGWLEASTTPDELKNAGLKEKGQLSGVITSSVGFLVARLDDVQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KEKPLAEVRDDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|296121100|ref|YP_003628878.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces limnophilus DSM 3776] gi|296013440|gb|ADG66679.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces limnophilus DSM 3776] Length = 354 Score = 95.9 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 34/277 (12%), Positives = 75/277 (27%), Gaps = 12/277 (4%) Query: 42 IRTTINGEVITDGDISK-RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 I +NG I+ + RI+ + K + L+ L ++ + + +T Sbjct: 87 IVRRVNGRPISLAQVEFLRISRGITDQDAAAAHKSLTETLVDNELIREFLARQKVTVADA 146 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + Q + D + G+ + + + W + + Sbjct: 147 DIARRKEQFIQQWKNFGYDLPAITKSWGLAEPAWTADITTPLAWY------VYSQSQIND 200 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 I A ++ L LF + +K + + + + Sbjct: 201 AAIAAEFKRQPARWNGTRLRARQLFLKWPAGQPDAATREKMAEIKTKIQAGQLSMEAAIR 260 Query: 221 KFASKIHDVSIGKAQYLL-ESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 +++ G + L + + P + G+ I + D R Sbjct: 261 QYSESQSASQGGDVGWFGYRGRLPAAVSRAAYLQQVGEVGQPVESPLGIHLIEVTDIRPG 320 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + + E V K R +A I Sbjct: 321 ELGI---EDARKEIFDELSQSRWNEIVTKSRESARIE 354 >gi|257066459|ref|YP_003152715.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaerococcus prevotii DSM 20548] gi|256798339|gb|ACV28994.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaerococcus prevotii DSM 20548] Length = 359 Score = 95.9 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 94/278 (33%), Gaps = 23/278 (8%) Query: 40 SRIRTTINGEVITDGDISKRIALLK-LQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98 + ++GE I+ D ++ + +L+ V ++ + L +I+K+ I D Sbjct: 49 DKTVAIVDGEKISKDDYKDELSFYASMLASQQQLKNSIVTMMVQDKLIANDIKKNDIKID 108 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 V+ +Q +N G + + D D + + + F Sbjct: 109 DKEVDDALMQSVQNFGGQEQFDKTLDDYNMSLDKFKETLKKD--LMYKKHREWFDSNNEV 166 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 E EI + K+ V+ ++ ++ K+ +E Sbjct: 167 TEDEIKKYFEDNKDEFVKVDASHILV------------QDEETAKEVKEKIDNGEDFAKL 214 Query: 219 LEKFASK-IHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276 E++++ + G + + +F++ + ++P +Q G I + Sbjct: 215 AEEYSTDTASAKNGGAVGAFSKGQMVKEFEDAAFSMKEGEVSDPVKSQFGYHIIKVNKI- 273 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K ++ + K A+Y+KKL +A + Sbjct: 274 -TDSFEDSKEEITKKIKDQK----YADYIKKLHDDANV 306 >gi|257789791|ref|YP_003180397.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Eggerthella lenta DSM 2243] gi|257473688|gb|ACV54008.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Eggerthella lenta DSM 2243] Length = 418 Score = 95.9 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 41/338 (12%), Positives = 104/338 (30%), Gaps = 41/338 (12%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR----IRTTINGEVITDGDISKRIALLKL 65 +I L C + S +S + T+NG I + I+ I ++ Sbjct: 3 KTYIMKTVCAVGLTAACAWGLAGCSSDDNASSGTGGVAGTVNGVEIAEDTITNYIQGVRE 62 Query: 66 Q-----------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 Q + + L K+ +E+ GIT +S+ ++ + Sbjct: 63 QLGADDEDSWGTWLSQNDYTPASVREEVFNSYAQRELLKEGVEEKGITVESSEIDEQIDK 122 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + E + + LD+ G+ ++ ++ + + + F + ++ Q Sbjct: 123 VKA-NYDTDEKWQAALDQAGMTEDSYRAEIEQKLKENKL-YASFASDEDPSDADMLQYAQ 180 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-H 227 +LF+ D + ++ + +++++ Sbjct: 181 MYATAYDGSKRSSHILFNSDDEATAQEVL--------DKLNSGELDFVDAVKEYSQDPGS 232 Query: 228 DVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286 G + S+L ++++ + + TQ G+ I D E+ Sbjct: 233 VERDGDVGWNNPSNLAKEYKDGLEPLEKGQLSGLVTTQFGIHIIKCTDVYKAPEEVTSLD 292 Query: 287 YLSAQ--------NTPTKIEKHEAEYVKKLRSNAIIHY 316 + + TK ++ +++ + A I Sbjct: 293 QIPEEWISVIASSLKSTKQQEAYKKWLDETTEAADIKI 330 >gi|254448730|ref|ZP_05062188.1| foldase protein PrsA, putative [gamma proteobacterium HTCC5015] gi|198261738|gb|EDY86025.1| foldase protein PrsA, putative [gamma proteobacterium HTCC5015] Length = 306 Score = 95.9 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 37/316 (11%), Positives = 78/316 (24%), Gaps = 50/316 (15%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS-------SRIRTTINGEVITDGDISKRIA 61 L+ K L V+ + A + ++NG IT I + + Sbjct: 3 LNMLKKTLLATAVIGALSLTACKDNGQQAQQPGLFPVKGEVVASVNGVDITQPQIDEYVD 62 Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 V+ELI + +Q + G Sbjct: 63 YRAGMNQPAA---DPVEELINLEILRQAAVEQGFADKPEVRAA----------------- 102 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 A ++ +V+ + ++ ++Q Sbjct: 103 -------------MTRAATNTLANPLVREKISGDVSDEDLRAEYDEQVKMMEEASGGGSE 149 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I + + + E+ + S G + Sbjct: 150 FNASHILVESEEEAKAL-------IKQLDDGADFATLAEENSVGPSASSGGSLGWATADT 202 Query: 242 LHPQFQNLLKKSQNN--TTNPYVTQKGVE-YIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 F L++ ++ T P TQ G + + E + +Q ++ Sbjct: 203 YVEAFATALEQLEDGSYTAAPVETQFGWHVILRSESRESQAPEAPAFDMVKSQLEKVVMQ 262 Query: 299 KHEAEYVKKLRSNAII 314 K Y++ LR+ A + Sbjct: 263 KRMQSYMENLRNKANV 278 >gi|148548673|ref|YP_001268775.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida F1] gi|148512731|gb|ABQ79591.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida F1] Length = 623 Score = 95.9 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 46/402 (11%), Positives = 117/402 (29%), Gaps = 89/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++++ + + A S+ +NG+ I+ ++S+ Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIVVLMALTGFEAIFQAATHSQDAAKVNGQTISQNELSQAA 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q + L + A++ LI L Q E + F ++ Sbjct: 61 DMQRRQLMQQLGKDFDPALLDDKLLREEALKGLISRKLLLQGAEDAKFAFSEAALDQVIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML---------- 154 + + SA+ F + + G G F++ L + + + Sbjct: 121 QTPEFQVDGKFSADRFDQVIRQMGYGRMQFREMLGEEMLIGQLRTGLAGSSFVTDQQVDA 180 Query: 155 -----------------------KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 K + E++ ++ + ++ + +I + Sbjct: 181 FARLEKQTRDFASLTFKADPAAVKVSDEEVKAHYDQHAKEFMSPDQVVIDYIELKKSAFF 240 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKL-------------------------------- 219 Q + ++ E+ L + + Sbjct: 241 DQVKVTDEELKAQYEKEIANLAEQRHAAHILIEVNDKVSDAQAKARAEEIEQRLAKGEDF 300 Query: 220 ----EKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 ++F+ S G + P F+ + + P T+ G I + Sbjct: 301 AALAKEFSQDPGSATSGGDLGFAGPGVYDPAFEEALYQLQNGQVSAPVRTEFGYHLIKLL 360 Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ +LK L+ +E+ + K+L+ A Sbjct: 361 GVQAPEVPSFASLKDKLTRDLKMPLVEQRYVDASKQLQDAAY 402 >gi|114704310|ref|ZP_01437218.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fulvimarina pelagi HTCC2506] gi|114539095|gb|EAU42215.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fulvimarina pelagi HTCC2506] Length = 295 Score = 95.9 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 33/287 (11%), Positives = 78/287 (27%), Gaps = 48/287 (16%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLK---LQKINGELEKIAVQELIVETLKKQEIE 91 S + T+ E IT+ D++ A + + + + LI + Q E Sbjct: 23 QVFAQSPVVATVGEEEITEADLTAAQAEIGGDFERVPEDQRRIAVLAALIDIKVLAQAAE 82 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 ++ + D+ +L +++ + Sbjct: 83 EATLQDDAQIAATI------------------------------DFLRDRTLHNAYFARE 112 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + E+ ++ +E R +L + + + E Sbjct: 113 GVDTVTDEELRARYEQEIAAMEPPQEVRARHIL-----------LETEDQARTVIEELQN 161 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEY 269 + ++ + G + + + P F + T P TQ G Sbjct: 162 GADFAELATEKSTGPTAQNGGDLGFFADGQMVPPFSEAAFALEPGAITEEPVQTQFGWHV 221 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + +KR + Q +++ V + R + Y Sbjct: 222 IKVEEKRQAEP--PAYEQVQEQIRRAVLQEKYVGLVGEAREELGVTY 266 >gi|222053408|ref|YP_002535770.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. FRC-32] gi|221562697|gb|ACM18669.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. FRC-32] Length = 296 Score = 95.5 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 29/300 (9%), Positives = 76/300 (25%), Gaps = 34/300 (11%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79 ++ + + + + + + V+ D+ + IA L + + Sbjct: 6 YLFALVAGMLLAGTVHAEEVNPVVGKVGDFVLRQADLERVIANLTPEAQQKFQGEQEQAS 65 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 L+ + L + + Y+ Sbjct: 66 LVNQILLTKALAAKARKEGFERKPEV--------------------------KEQLSYII 99 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 Q + + ++ + E+ Q+ + V ++ K Sbjct: 100 DQFLGQEYLRKVVTANVEVPDAELKKYYQEHEKDFVVPERVKVRHIYFAAAKDATAEVKA 159 Query: 200 KRIKDAEESRLRLPKDCNKLE----KFASKIHDVSIGKAQYLLESDLH--PQFQNLLKKS 253 + AE+ +L K + + + G YL + + Sbjct: 160 QARAKAEKIAEQLKKGGDFAKLAGENSEDTESAANGGDLGYLTPGKTNSEEFEKAAFSLK 219 Query: 254 QNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + T G I + ++++ K Y+S+ EK E++ + Sbjct: 220 AGEVSPVVETPFGYHIIKVDERQEKRTATFEETKDYISSTLKAQLEEKKAREFLDAVAKE 279 >gi|163867494|ref|YP_001608693.1| peptidyl-prolyl cis-trans isomerase [Bartonella tribocorum CIP 105476] gi|161017140|emb|CAK00698.1| peptidyl-prolyl cis-trans isomerase [Bartonella tribocorum CIP 105476] Length = 317 Score = 95.5 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 30/290 (10%), Positives = 69/290 (23%), Gaps = 48/290 (16%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISK---RIALLKLQKINGELEKIAVQELIVETLKKQ 88 + + S + I+G+ IT G + I + + + + ++ + + Sbjct: 41 ASEKAVSPSHVMAVIDGKNITAGQLDDLALEINPNLARFPDEQRRIMVLKAYLDMQALAK 100 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 + + + Sbjct: 101 AARSKDLDKTEAYNKR------------------------------MAVMRDNVLQQLYF 130 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 K + K + ++E ++ E R +L + Sbjct: 131 KQAIVDKISDTDLEDLYKQEIAALPKEDEVKARHILVKTRKEAEA-----------IIKH 179 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKG 266 + +K ++ G Y + F++ T P + G Sbjct: 180 LNKGENFEEIAKKSSTDGSAAVGGDLGYFSHGQMVKPFEDAAFGLKVGEYTKQPVESPFG 239 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D+R + I+K E + LRS + Y Sbjct: 240 WHIIKLEDRRVKQP--PTFDEVKEMLRTQLIKKRYQELIVDLRSKIDVKY 287 >gi|296135612|ref|YP_003642854.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomonas intermedia K12] gi|295795734|gb|ADG30524.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomonas intermedia K12] Length = 640 Score = 95.5 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 49/405 (12%), Positives = 99/405 (24%), Gaps = 103/405 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58 M + S ++++ + F + I Y S+ S+ + G+ I+ + Sbjct: 1 MLESIR-KHSKLMQIVLFVLIFPSFVLFGIQGYSSFEGSADAAAKVGGQTISMQQLDAAN 59 Query: 59 --RIALLK---------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 IA L+ Q E + + +I +TL + E + + V + Sbjct: 60 RDEIARLQSMLGSAVDIKQLDTPEQKLRTLDGMIRQTLLQLEARREHLEVTDAQVQQAIL 119 Query: 108 QHAR-------NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------- 149 Q + + + + S + QG+ F+ + Q I V+ Sbjct: 120 QIPQIAALRKPDGSFDVQAYRSLIAAQGMNTAQFEAQVREQLILQQVLSGLAGSVIDSQA 179 Query: 150 ----------------------NDFMLKYGNLEMEIPANKQKMKNITVREY--------- 178 D+ + EI + + Sbjct: 180 LATAAAKAAAQQREVRLALFKPADYTAQVQVTPQEIETFYKNNTARFQKPESADIQYVVL 239 Query: 179 -------------------------------LIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 R I ++ AE Sbjct: 240 SAAEVAAGIKVTAEQAKAFYDANLSKFSTPAERRASHILIAVPADATAAQQEQAKARAEA 299 Query: 208 SRLRLPKDCNKLEKFASKI-----HDVSIGKAQYLLESDLHPQFQN--LLKKSQNNTTNP 260 ++ + + A K G Y + F + + P Sbjct: 300 IAKQVKANPAEFAALARKDSQDPGSAEKGGDLGYFTADSMVKPFADAVFGMQKIGEIVGP 359 Query: 261 YVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAE 303 TQ G I + + A+KA + Q +K + Sbjct: 360 IKTQFGYHIIELTGIKPGAQQPFDAVKASIEKQLQQEAAQKQMSA 404 >gi|313499610|gb|ADR60976.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida BIRD-1] Length = 623 Score = 95.5 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 46/402 (11%), Positives = 117/402 (29%), Gaps = 89/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++++ + + A S+ +NG+ I+ ++S+ Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIVVLMALTGFEAIFQAATHSQDAAKVNGQTISQNELSQAA 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q + L + A++ LI L Q E + F ++ Sbjct: 61 DMQRRQLMQQLGKDFDPALLDDKLLREEALKGLISRKLLLQGAEDAKFAFSEAALDQVIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML---------- 154 + + SA+ F + + G G F++ L + + + Sbjct: 121 QTPEFQVDGKFSADRFDQVIRQMGYGRMQFREMLGEEMLIGQLRTGLAGSSFVTDQQVDA 180 Query: 155 -----------------------KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 K + E++ ++ + ++ + +I + Sbjct: 181 FARLEKQTRDFASLTFKADPAAVKVSDEEIKAHYDQHAKEFMSPDQVVIDYIELKKSAFF 240 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKL-------------------------------- 219 Q + ++ E+ L + + Sbjct: 241 DQVKVTDEELKAQYEKEIANLAEQRHAAHILIEVNDKVTDAQAKARAEEIEQRLAKGEDF 300 Query: 220 ----EKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 ++F+ S G + P F+ + + P T+ G I + Sbjct: 301 AALAKEFSQDPGSANSGGDLGFAGPGVYDPAFEEALYQLQNGQVSAPVRTEFGYHLIKLL 360 Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ +LK L+ +E+ + K+L+ A Sbjct: 361 GVQAPEVPSFASLKDKLTRDLKMPLVEQRYVDASKQLQDAAY 402 >gi|326790698|ref|YP_004308519.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium lentocellum DSM 5427] gi|326541462|gb|ADZ83321.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium lentocellum DSM 5427] Length = 352 Score = 95.5 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 30/309 (9%), Positives = 83/309 (26%), Gaps = 25/309 (8%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------------GELEKIAVQE 79 + + + T+NG I GD+ K + + + + + + Sbjct: 41 AGTDSEAAKTVLATVNGVEILQGDLDKVYNSMVAEYQSYYGESEEMLTFLKQQKPGLLTG 100 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 LI L KQ+ ++ IT V + G E + G +K + Sbjct: 101 LINRELLKQKAKELNITCTDEEVEKIYSDLVSTYG--EEQVQEVIKANGFTTETYKAQIK 158 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL------FSIPDNKLQ 193 V + + + ++ + + + D+ + Sbjct: 159 EDEALSKVQEKMQEGEIKVTDEDVKKYYDENIDSFTTGAGANMEHILVKVADTDTDDYKK 218 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL---ESDLHPQFQNLL 250 K I+ + K + + ++ + Sbjct: 219 KCDEAVKTIEKEITDGTTFDELKTKYTADGIDTNMYVVEDLGFVQYEQPNYDTAFLAGAK 278 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + + + G +I + +++ +KA ++ + + +++ Sbjct: 279 EVKEGEISKAVKSSFGYHFIKVEGIKDKEVKPLEDVKAQITTTLENEQKNAYYNAKLEEW 338 Query: 309 RSNAIIHYY 317 A I + Sbjct: 339 TKAAKIEKF 347 >gi|228472041|ref|ZP_04056809.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga gingivalis ATCC 33624] gi|228276653|gb|EEK15366.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga gingivalis ATCC 33624] Length = 451 Score = 95.5 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 33/315 (10%), Positives = 91/315 (28%), Gaps = 12/315 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--ING 70 I +L F+ + + + + + +I + DI + + LK Q Sbjct: 4 ISILCQLFLFSLLSTSALWAQSPKNKIDGVAAVVGDYLILETDIDRALVELKSQNVDTKN 63 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + +L+ + L + + I N + + D +D Sbjct: 64 VTRCQLLGKLMEDKLYVSQAIQDSIKISDNDIRDGVNRRIDFLVEQLGDIKKVVDFYHKD 123 Query: 131 DNHFKQYLAIQSIWPDV----VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 D + + + + +K + E+ K+ + + Sbjct: 124 DEQSLRDELFEILRQNELSSRMKAKIVENIEVTPEEVKQFFNKIPKDELPTIGTELEIAQ 183 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS---IGKAQYLLESDLH 243 I Q + K I+ +E + + ++ A + + +S Sbjct: 184 IVIEPKAPQSEIDKVIEQLKEIKKDVLENGTSFSTKAILYSADRATGGKELTFNRKSSFA 243 Query: 244 PQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 +F+++ + ++P+ T G + + R + + + + Sbjct: 244 KEFKDVAFSLQEGEISDPFKTDFGWHILQVVKIRGKEVSVRHILMVPQIPQNSL--EEAK 301 Query: 303 EYVKKLRSNAIIHYY 317 + + +R I + Sbjct: 302 KKINDIRDKIINKEF 316 >gi|167841272|ref|ZP_02467956.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia thailandensis MSMB43] Length = 296 Score = 95.5 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 32/310 (10%), Positives = 83/310 (26%), Gaps = 34/310 (10%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING- 70 + + + + ++ + + +T D++ + + + Sbjct: 1 MMTKMKIRAIAVSGLLLGAP--LAAHARDDVIANAAQASVTQADLATLLKTVNPEVRERL 58 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + A+ +++ + A++ G E Sbjct: 59 AADPAALDQVVRS----------------ALAQKAVLADAKSKGWDKEAQ---------V 93 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY--LIRTVLFSIP 188 + +Q + + + + EI A + + + + ++P Sbjct: 94 QSAIEQARRDIVVRSYLASMNAPPADYPSDAEIQAAYDRNLPAFMAPRALHVAQIYIAVP 153 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLES-DLHPQF 246 N +R SR R + + + G ++ E L Sbjct: 154 PNAEAATLDKARRQAADLASRARNGDFAALAKANSQDHASAANGGDLGFVPEPLMLPEVR 213 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 Q + P T G + + D +K + A + +++ Y Sbjct: 214 QAAGALKPGQVSAPIRTPAGFHVVKLIDARAAAPRPLADVKEQVRAMLRAQRTQQNAQAY 273 Query: 305 VKKLRSNAII 314 + KL +NA I Sbjct: 274 LAKLTANAPI 283 >gi|167032914|ref|YP_001668145.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida GB-1] gi|166859402|gb|ABY97809.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida GB-1] Length = 623 Score = 95.5 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 47/402 (11%), Positives = 118/402 (29%), Gaps = 89/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++++ + + A S+ +NG+ I+ ++S+ Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIVVLMALTGFEAIFQAATHSQDAAKVNGQTISQNELSQAA 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q + L + A++ LI L Q E + F ++ Sbjct: 61 DMQRRQLMQQLGKDFDPALLDDKLLREEALKGLISRKLLLQGAEDAKFAFSEAALDQVIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML---------- 154 + + SA+ F + + G G F++ LA + + + Sbjct: 121 QTPEFQVDGKFSADRFDQVIRQMGYGRMQFREMLAEEMLIGQLRTGLAGSSFVTDQQVDA 180 Query: 155 -----------------------KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 K E++ ++ + ++ + +I + Sbjct: 181 FARLEKQTRDFASLTFKADPAAVKVSEEEVKAHYDQHAKEFMSPDQVVIDYIELKKSVFF 240 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKL-------------------------------- 219 Q + ++ E+ L + + Sbjct: 241 DQVKVTDEELKAQYEKEIANLAEQRHAAHILIEVNDKVTEAQAKARAEEIEQRLAKGEDF 300 Query: 220 ----EKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 ++F+ + G + P F++ K + P T+ G I + Sbjct: 301 AALAKEFSQDPGSANNGGDLGFAGPGVYDPAFEDALYKLQDGQVSTPVRTEFGYHLIKLL 360 Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ +LK L+ +E+ + K+L+ A Sbjct: 361 GVQAPEVPSFASLKDKLTRDLKIPLVEQRYVDASKQLQDAAY 402 Score = 35.4 bits (79), Expect = 10.0, Method: Composition-based stats. Identities = 25/270 (9%), Positives = 61/270 (22%), Gaps = 15/270 (5%) Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 I LL +Q +L + ++ + Sbjct: 357 IKLLGVQAPEVPSFASLKDKLTRDLKIPLVEQRYVDASKQLQDAAYEASDLAQPAQDLNL 416 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 G + + + + N + + Sbjct: 417 KVHTSAAFGREGGEGITANRS--VVQAAFSEEVLDEGANSTAIELDPETTVVLRVKEHRK 474 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI-------- 231 + + +K + + +L A +H+ Sbjct: 475 PEQLPLEAVAKNISEHLAKEKATAELKAKADKLIAGLRDGSIAAGSVHEGQGWKAYEAVT 534 Query: 232 -GKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKG-VEYIAICDKRD-LGGEIALKAY 287 G+ + ++L F+ + V + G + + + + K Sbjct: 535 RGEDG-IDPAELQALFRLGKPQAKDKPVYGSVVLRDGSLVVLQLKGVNEGATATDEEKQQ 593 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + ++ A Y K+L +NA I Y Sbjct: 594 IRRYLASRAGQQDFAAYRKQLEANADITRY 623 >gi|54309794|ref|YP_130814.1| putative peptidyl-prolyl cis-trans isomerase D [Photobacterium profundum SS9] gi|46914232|emb|CAG21012.1| putative peptidyl-prolyl cis-trans isomerase D [Photobacterium profundum SS9] Length = 623 Score = 95.5 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 37/406 (9%), Positives = 95/406 (23%), Gaps = 94/406 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + ++ F + SY + S ING I+ D + Sbjct: 1 MMERLREGVNSIWVKVILGLIIFSFVFAGVGSYLAGG-SQPAAAKINGTEISQNDFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELI-----------------VETLKK 87 + + + + + + +I E ++K Sbjct: 60 QNERNRMQSQLGDYFSTLLGDPEYVKQFRQSVLDRMINDVLIEQRATELGLRISDEHIRK 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS----- 142 D N + R +G + + F+ ++ + Sbjct: 120 TITSMPEFQRDGQFDNDSYTMLLRRSGFTPDQFAEYMRTDMLRTQFLTAIQGSDFTLDSE 179 Query: 143 --------IWPDVVK------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS-- 186 VV+ DF + E A ++ + R ++ Sbjct: 180 LTALRKLEAQQRVVRSLTLDLADFTKNATVTDEEAKAFYEQNPQMFTRPDQVKVAYIELS 239 Query: 187 -----------------IPDNKLQNQGFVQKRIKDAEESRLR-----------------L 212 + +++R + Sbjct: 240 GEGLKDTLDVSDEDVKAYYEEHKDKYSSIEQRQVSHILVQGDNADAKAKAEALKAELDAG 299 Query: 213 PKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEY 269 + GK + + P F++ + + + + G Sbjct: 300 ADFAELALSSSDDTYSGKDGGKLDWFERGVMDPAFEDAAFGLANNGDISGVVKSSFGYHI 359 Query: 270 IAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 I + + + + A + + + +H + KL A Sbjct: 360 IKLDAVKASQVKPFADVSAEIIVELREQQAAEHFYDMQTKLAETAF 405 >gi|308445916|ref|XP_003087049.1| hypothetical protein CRE_13891 [Caenorhabditis remanei] gi|308264485|gb|EFP08438.1| hypothetical protein CRE_13891 [Caenorhabditis remanei] Length = 438 Score = 95.5 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 29/313 (9%), Positives = 95/313 (30%), Gaps = 17/313 (5%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-------RIALLKLQ 66 K + + ++ A +I + I D+ + R+ K + Sbjct: 5 KFKKLFKASTLALLISTSVSVYAAPQDQIIAIVGSTAILKSDLDQGVAEATHRLQAQKKE 64 Query: 67 KINGE-LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSSF 123 L++ + +LI + ++++K G+ D ++N ++ A+ +G + Sbjct: 65 IPPQNILQQQVLSQLITHDAQLEQVKKYGLKADEKSLNEAVLKVAQQSGENSLEAFQKKL 124 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + +A + + + M + ++++ + Sbjct: 125 DAVAPGTYELLRNRVAEDLLIQRLSQQQVMSRIKITDLDVENFL--KSPEGQAAVGSQVH 182 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 + + + ++ K + +KF++ V + SD+ Sbjct: 183 VLHMRISGEAPASELESIAKAVRTDLKDSNDVKSIEKKFSTAQVKVDGADMGFRPLSDIP 242 Query: 244 PQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIE 298 + TT+ + GV + + +K+ ++ + + Sbjct: 243 TDLAARVTTLEPGQTTDLIPAKDGVHVLKLLEKKSNEQKALVPQFNTRHILIKTSEVVSP 302 Query: 299 KHEAEYVKKLRSN 311 ++ + + + + Sbjct: 303 ENAKQTIDSIYNR 315 Score = 88.2 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 45/142 (31%), Gaps = 3/142 (2%) Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY 236 T I +++ + ++ I +++ G + Sbjct: 285 PQFNTRHILIKTSEVVSPENAKQTIDSIYNRLKAGDDFATLASTYSNDPGSARDGGSLGW 344 Query: 237 LLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTP 294 + + P+F L++ S N + P+ TQ G + + R K Sbjct: 345 VSPGMMVPEFDKLMQSSPVNEISKPFQTQFGWHILQVTGTRQQDMTSEYQKRMARQILGE 404 Query: 295 TKIEKHEAEYVKKLRSNAIIHY 316 + E ++++LR+N I Sbjct: 405 RQFESEYDGWLRELRANTYIEI 426 >gi|90579274|ref|ZP_01235084.1| putative peptidyl-prolyl cis-trans isomerase D [Vibrio angustum S14] gi|90440107|gb|EAS65288.1| putative peptidyl-prolyl cis-trans isomerase D [Vibrio angustum S14] Length = 630 Score = 95.5 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 38/406 (9%), Positives = 97/406 (23%), Gaps = 94/406 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ + + ++ F + SY + + +N + I+ + Sbjct: 1 MMERLREGANSIWVKIILSLIIFSFVFAGVGSYLAGGNEQ-VAAKVNDKEISQRAFEQAY 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + Q + ++ ++ + L +Q + G+ V Sbjct: 60 QNQRNQMQQRLGDYFSTLMGDPAYVQQFRNSVLERMVNDELIEQRATELGLGVSDAQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 V + E ++ L + GI F + + + + Sbjct: 120 AIVAMPAFQVDGVFNNEQYNLTLRRAGISPEQFAESIRKDMLRQQFLSALEGSDFALNNE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNIT-------------- 174 DF K + E A +K K Sbjct: 180 LNELRKLESQERVVRTLKLNLADFTDKVTVTDEEAKAYYEKNKTQFTRPAQVKVSYIELS 239 Query: 175 ----------------------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 +Y + + + + + Sbjct: 240 DKNLVNNIKITDKEAEAYYNEHKSKYSTAEKIQVSHILVKGDSDASKAKAEALLAELKAG 299 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK--SQNNTTNPYVTQKGVEY 269 + +K + GK + + + P F+ + + + G Sbjct: 300 ANFADVAKKSSDDTFSAKDGGKLDWFGKGVMDPAFEKAAFSLAKPGDMSGLVKSSFGYHI 359 Query: 270 IAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 I + + + +KA + A+ ++ + + KL A Sbjct: 360 ILLDGIEEPKVKPFADVKASIVAELQEQQVAEQFYKLQSKLAETAF 405 >gi|300023220|ref|YP_003755831.1| SurA domain protein [Hyphomicrobium denitrificans ATCC 51888] gi|299525041|gb|ADJ23510.1| SurA domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 442 Score = 95.5 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 92/262 (35%), Gaps = 5/262 (1%) Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 + + + ++K A++ELI E LK QE +K +T + + V+ A + Sbjct: 184 LQREAFESARKASLPAVKKQAIEELIDERLKLQEAKKQSVTIEDSEVDRVITGIAERNKM 243 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + + F + G + K + W +VV+ F ++ Sbjct: 244 TLDQ---FTKQVGGSIDPMKSRIRAALSWNEVVRRRFGPLINVNTKDVDKMVATAAGSAQ 300 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 + ++ I K + + +RI++AE+ R R + A+ I Sbjct: 301 EDVELQIQRVQIMLPKKMEEHGIAQRIEEAEKVRSRFTDCKSTAAA-ATGIPGAKFENIG 359 Query: 236 YLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 S L + LL S P V VE +C + + + + + Sbjct: 360 KRKSSTLPEPTRTLLLNASDGEMLPPSVGDGAVELYVVCGRDSVKSDADKRTQAEGELKQ 419 Query: 295 TKIEKHEAEYVKKLRSNAIIHY 316 + E Y+K LR +A I Y Sbjct: 420 KEFEVMARRYLKDLREDAHIEY 441 >gi|26989028|ref|NP_744453.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida KT2440] gi|24983852|gb|AAN67917.1|AE016424_3 peptidyl-prolyl cis-trans isomerase D, putative [Pseudomonas putida KT2440] Length = 623 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 47/402 (11%), Positives = 117/402 (29%), Gaps = 89/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++++ + + A S+ +NG+ I+ ++S+ Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIVVLMALTGFEAIFQAATHSQDAAKVNGQTISQNELSQAA 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q + L + A++ LI L Q E + F ++ Sbjct: 61 DMQRRQLMQQLGKDFDPALLDDKLLREEALKGLISRKLLLQGAEDAKFAFSEAALDQVIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML---------- 154 + + SAE F + + G G F++ L + + + Sbjct: 121 QTPEFQVDGKFSAERFDQVIRQMGYGRMQFREMLGEEMLIGQLRTGLAGSSFVTDQQVDA 180 Query: 155 -----------------------KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 K + E++ ++ + ++ + +I + Sbjct: 181 FARLEKQTRDFASLTFKADPAAVKVSDEEVKAHYDQHAKEFMSPDQVVIDYIELKKSAFF 240 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKL-------------------------------- 219 Q + ++ E+ L + + Sbjct: 241 DQVKVTDEELKAQYEKEIANLAEQRHAAHILIEVNDKVTDAQAKARAEEIEQRLAKGEDF 300 Query: 220 ----EKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 ++F+ + G + P F+ K + P T+ G I + Sbjct: 301 AALAKEFSQDPGSANTGGDLGFAGPGVYDPAFEEALYKLQDGQVSAPVRTEFGYHLIKLL 360 Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ +LK L+ +E+ + K+L+ A Sbjct: 361 GVQAPEVPSFASLKDKLTRDLKMPLVEQRYVDASKQLQDAAY 402 >gi|254438097|ref|ZP_05051591.1| SurA N-terminal domain family [Octadecabacter antarcticus 307] gi|198253543|gb|EDY77857.1| SurA N-terminal domain family [Octadecabacter antarcticus 307] Length = 383 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 87/248 (35%), Gaps = 5/248 (2%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +N V+++ +I +R+ALL + G LE A ++LI E LK + ++ + + + Sbjct: 9 AIIVNDSVVSEFEIDQRVALLLAFRTPGNLEDTAHEQLIQERLKLEALDSARLRITDEGL 68 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + A L + F + L + G+ + F+ ++ + W D ++ F E + Sbjct: 69 VLAMTEFATRANLELDQFITMLGQSGVAEETFRDFVRVNVSWRDFIRTRFNDSAQVSEAD 128 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + + E L+ ++ + + Sbjct: 129 IDLALGQSGASSSIEVLLNEII----IPAPAESAQQAMATAERIAQLTTTSAFEAEARSV 184 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 ++ G+ +L S+ + LL + T P GV + R++ Sbjct: 185 SALPSRTRGGRLDWLPISNYPAGLRGLLLNLAPGEVTAPIPITDGVALFQMRGLREVPRA 244 Query: 282 IALKAYLS 289 A + Sbjct: 245 APEPAAIE 252 >gi|110589212|gb|ABG77115.1| peptidyl-prolyl cis-trans isomerase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 241 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 75/219 (34%), Gaps = 4/219 (1%) Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 LI L+ Q + GIT D T++ ARN +S L+ GI HF++ L Sbjct: 1 LITNQLQLQTATRLGITVDDATLSRTIASIARNNNISLNRLRETLESDGINFTHFREKLR 60 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + I + + + + + E ++ ++ + + + I + VQ Sbjct: 61 REIIINRLRQKEVVNRIVITEQDVRSHMAREAGSSRQRAAFHIQHILIATPEGAAPEDVQ 120 Query: 200 KRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 AE+ + + + + G ++ + + F +L+ + Sbjct: 121 AARGKAEQLVLELREGADFSSTAIRESDGRQALEGGDLGWIEAARVPSIFTHLMDQLEPG 180 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 + ++P G I + + R + + + Sbjct: 181 DISDPVRNASGFHIIKLVEVRGAKRHLVSQTHARHILIN 219 >gi|56461330|ref|YP_156611.1| parvulin-like peptidyl-prolyl isomerase [Idiomarina loihiensis L2TR] gi|81678272|sp|Q5QVN9|SURA_IDILO RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|56180340|gb|AAV83062.1| Periplasmic parvulin-like peptidyl-prolyl isomerase (two homologous domains) [Idiomarina loihiensis L2TR] Length = 432 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 110/317 (34%), Gaps = 18/317 (5%) Query: 13 IKLLTTYFVLIIFCIVPIV---SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI- 68 +K + ++ + + + ++ + R+ ++ V+ I + I +K + Sbjct: 1 MKKIASFCSAAVLIASSFLLNNTVQAQQILDRVVVVVDDGVVLQSQIDQLIQQVKNGQNF 60 Query: 69 -------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 + LE A++ LI++ ++ Q + GI D N + + A N L+ + Sbjct: 61 NSSNAPSDEVLETQAIERLILQEIQLQMANRMGIEIDDNQLEQAINEIANNQDLTTAELR 120 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 + G+ +++ + + + V + + EI + +++ + R Sbjct: 121 ENMVSSGMSWAAYRENIRNELVIQQVQRAAVQQRVSITPQEINNLVKLIESNQEVQTEYR 180 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAE---ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 I + +Q ++K + A + + + +S + G ++ Sbjct: 181 LAQILISADSNSSQAELEKAKERANTVLNLLDKGSDFADLAVRSSSGSAALDGGDLGWMT 240 Query: 239 ESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTP 294 + + F + + P + G + + DKR + + ++ + + Sbjct: 241 VNGMPTLFAEAVDGKSVGDVVGPIRSGIGFHILKVQDKRGEQTVEVQEVKARHILIKPSV 300 Query: 295 TKIEKHEAEYVKKLRSN 311 + E + K R Sbjct: 301 ILSDNKAKEMLNKYREQ 317 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 36/272 (13%), Positives = 79/272 (29%), Gaps = 9/272 (3%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 IT +I+ + L++ + ++A Q LI + E +NTV + + Sbjct: 157 ITPQEINNLVKLIESNQEVQTEYRLA-QILISADSNSSQAELEKAKERANTVLNLLDKGS 215 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 L+ S G V G + I + K+ Sbjct: 216 DFADLAVRSSSGSAALDGGDLGWMTVNGMPTLFAEAVDGKSVGDVVGPIRSGIGFHILKV 275 Query: 171 KNITVREYLIRTVLFSIPDNKLQ-----NQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 ++ + + + + + + K E+ + ++ Sbjct: 276 QDKRGEQTVEVQEVKARHILIKPSVILSDNKAKEMLNKYREQIASGEKTFAELAREHSAD 335 Query: 226 I-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 G + + P+F+ Q+ + P+ TQ G + + +R L Sbjct: 336 PGSASRGGDLGWARPNKYAPEFKQKVESIEQDTISEPFSTQFGWHIVEVTGRRTLDATEE 395 Query: 284 LKAY-LSAQNTPTKIEKHEAEYVKKLRSNAII 314 K K + + +++R A I Sbjct: 396 NKQERAYQMLFSRKFREELDNWQQEIRDQAFI 427 >gi|317489254|ref|ZP_07947771.1| ppic-type ppiase domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325832301|ref|ZP_08165300.1| PPIC-type PPIASE domain protein [Eggerthella sp. HGA1] gi|316911655|gb|EFV33247.1| ppic-type ppiase domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325486137|gb|EGC88591.1| PPIC-type PPIASE domain protein [Eggerthella sp. HGA1] Length = 418 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 41/338 (12%), Positives = 104/338 (30%), Gaps = 41/338 (12%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR----IRTTINGEVITDGDISKRIALLKL 65 +I L C + S +S + T+NG I + I+ I ++ Sbjct: 3 KTYIMKTVCAVGLTAACAWGLAGCSSDDNASSGTGGVAGTVNGVEIAEDTITNYIQGVRE 62 Query: 66 Q-----------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 Q + + L K+ +E+ GIT +S+ ++ + Sbjct: 63 QLGADDEDSWGTWLSQNDYTPASVREEVFNSYAQRELLKEGVEEKGITVESSEIDEQIDK 122 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + E + + LD+ G+ ++ ++ + + + F + ++ Q Sbjct: 123 VKA-NYDTDEKWQAALDQAGMTEDSYRAEIEQKLKENKL-YASFASDEDPSDADMLQYAQ 180 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-H 227 +LF+ D + ++ + +++++ Sbjct: 181 MYATAYDGSKRSSHILFNSDDEATAQEVL--------DKLNSGELDFVDAVKEYSQDPGS 232 Query: 228 DVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286 G + S+L ++++ + + TQ G+ I D E+ Sbjct: 233 VERDGDVGWNNPSNLAKEYKDGLEPLEKGQLSGLVTTQFGIHIIKCTDVYKAPEEVTSLD 292 Query: 287 YLSAQ--------NTPTKIEKHEAEYVKKLRSNAIIHY 316 + + TK ++ +++ + A I Sbjct: 293 QIPEEWISVIASSLKSTKQQEAYKKWLDETTEAADIKI 330 >gi|206900652|ref|YP_002251221.1| foldase protein PrsA [Dictyoglomus thermophilum H-6-12] gi|206739755|gb|ACI18813.1| foldase protein PrsA [Dictyoglomus thermophilum H-6-12] Length = 355 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 39/322 (12%), Positives = 89/322 (27%), Gaps = 25/322 (7%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ---- 66 K+L FV I V+ M + ING ++ + R+ +K Q Sbjct: 5 SIFKILFIVFVAIFILGGAFVALVYHQMKNYPVLKINGMPVSRQEYKDRLNFIKTQYSIM 64 Query: 67 -------KINGELEKIAVQELIVE--TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 ++ +E I + K + E + + Sbjct: 65 FGVDFTTTQGQKMLSQVKEETIKDIARWKIVQAETKKRGISVSEKEVETRLKEIEKEFPS 124 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 Q D + + +++ + ++ E EI + + Sbjct: 125 VLQFEITLSQYGYDRNTFKEELRKNLLMRKLMDEIGKDEKVTEDEIKKYYNENIKLF--- 181 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQY 236 +K + E + +K++ S G + Sbjct: 182 -----EHPKEYKVYSIFIKDEKKAKEVYNELLSNKITFTDAAKKYSEDTTTKDSGGDLGF 236 Query: 237 LLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNT 293 + + L + + + N + P T +G + + ++ KA + + Sbjct: 237 ITQGTLPEEVEKVTFTLPLNQISKPIKTDEGYYITKVTEIKEAYTTPYFQAKAEIEDKLL 296 Query: 294 PTKIEKHEAEYVKKLRSNAIIH 315 K K +++++ S A I Sbjct: 297 YDKRSKVFNKWLEEQVSKAKIE 318 >gi|330817257|ref|YP_004360962.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia gladioli BSR3] gi|327369650|gb|AEA61006.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia gladioli BSR3] Length = 259 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 88/278 (31%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I + +A L + Q+ + +L K+ QEL+ + QE K G+ ++ Sbjct: 25 VAVVNGTPIPKSRVDAMVAQLVQQGQQDSEQLRKMVGQELVNREILMQEALKEGLPNRAD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + DF+ K + Sbjct: 85 VKQQV-------------------------------AIAQQTVVLRALIEDFVKKNQPSD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A ++ + + + ++ K K + + Sbjct: 114 AEVKAKYDELAKGATGSEYHLHHILVDNEQQAKDLIAKIKA----------GAKFEDLAK 163 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT-NPYVTQKGVEYIAICDKRD 277 +F+ + G + P+F N + T P TQ G I + D R Sbjct: 164 QFSKDPGSAKNGGDLDWADPKSFVPEFANAATHLQKGQMTDEPVKTQFGWHIIRVDDVRP 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + AQ +++ + +KLR+ A I Sbjct: 224 IAP--PPFEQVKAQLAQQMVQQKLQAFEEKLRAQAKIQ 259 >gi|313681760|ref|YP_004059498.1| ppic-type peptidyl-prolyl cis-trans isomerase [Sulfuricurvum kujiense DSM 16994] gi|313154620|gb|ADR33298.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfuricurvum kujiense DSM 16994] Length = 280 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 85/303 (28%), Gaps = 44/303 (14%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL-------LKLQKINGELEKIAV 77 + + S + A + T+NG+ IT +++K + EL + Sbjct: 9 IMGLLLGSISASAA---VLATVNGDEITSDEVNKVLIEGTQGRLDSLSPDKQNELRHRII 65 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 + +IV+ L + +K+GI Sbjct: 66 EGMIVQNLIYDDAQKTGILDSKEYKQEL---------------------------ETTID 98 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 + V + + E+ A N + + + + + Q Sbjct: 99 RLKVQLAAKVWEQEQFDAIKVDAKEVKAYFDTNPNEFIDKEK---IHARHILVRSKTQAQ 155 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256 + + + F+ G Y + F + Sbjct: 156 SIIASMKTLSGDRLKKEFMAQAKLFSIGPSAARGGDLGYFPRGQMVASFNDAAFALKTGT 215 Query: 257 TTN-PYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++ P +Q G I + D++ G A+K+++ + K ++ + + L A Sbjct: 216 VSSIPVQSQFGYHVIYVEDRKPAKKMGFDAVKSFIEQRLKMDKFKETMEKKMAALHEKAK 275 Query: 314 IHY 316 I Y Sbjct: 276 ITY 278 >gi|89070359|ref|ZP_01157666.1| PPIC-type PPIASE domain protein [Oceanicola granulosus HTCC2516] gi|89044006|gb|EAR50181.1| PPIC-type PPIASE domain protein [Oceanicola granulosus HTCC2516] Length = 405 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 90/242 (37%), Gaps = 4/242 (1%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 T+N I+ +I +R LL++ G+LE +A ++L+ + LK E++++G+ ++ Sbjct: 31 AITVNDSAISFYEIDQRAKLLRVFNTPGDLEALAREQLVEDRLKLAELDRAGLQLSEESL 90 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 A L E F L + G+ + + ++ + W D ++ + + E + Sbjct: 91 AAEMEAFAGRADLPYEQFIGVLAEAGVAEETLRDFVRVGVSWRDYIRTRYRGRAEVNEAD 150 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + N + +L I + + I + ++ Sbjct: 151 VDQTLAAPPNGGTQIE---VLLNEIIIPAPPPRAAEAQAIAERISQTTSTAAFEAAAREY 207 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 ++ G+ +L ++ P Q +L + T P G+ + R++ G Sbjct: 208 SALPSRERGGRLDWLPIANYPPPIQALVLGLAPGEVTAPLPIPNGIALFQLRAVREVAGS 267 Query: 282 IA 283 Sbjct: 268 RP 269 Score = 39.7 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Query: 237 LLESDLHPQFQNLLKKSQNNTTNPYVTQKG---VEYIAICDKRDLGGEIALKAYLSAQNT 293 L + L + + T+ +T G + + +C++R E + +++ Sbjct: 323 LPVGQVPTDIALELARLDDGETSTALTANGGQSLVLLMLCERR-YSEEPVDREAVASNLR 381 Query: 294 PTKIEKHEAEYVKKLRSNAII 314 ++ + + +LR+ A+I Sbjct: 382 SQRLSGFADQLLAELRAAAVI 402 >gi|258543673|ref|YP_003189106.1| peptidyl-prolyl cis-trans isomerase precursor [Acetobacter pasteurianus IFO 3283-01] gi|256634751|dbj|BAI00727.1| peptidyl-prolyl cis-trans isomerase precursor [Acetobacter pasteurianus IFO 3283-01] gi|256637807|dbj|BAI03776.1| peptidyl-prolyl cis-trans isomerase precursor [Acetobacter pasteurianus IFO 3283-03] gi|256640861|dbj|BAI06823.1| peptidyl-prolyl cis-trans isomerase precursor [Acetobacter pasteurianus IFO 3283-07] gi|256643916|dbj|BAI09871.1| peptidyl-prolyl cis-trans isomerase precursor [Acetobacter pasteurianus IFO 3283-22] gi|256646971|dbj|BAI12919.1| peptidyl-prolyl cis-trans isomerase precursor [Acetobacter pasteurianus IFO 3283-26] gi|256650024|dbj|BAI15965.1| peptidyl-prolyl cis-trans isomerase precursor [Acetobacter pasteurianus IFO 3283-32] gi|256653014|dbj|BAI18948.1| peptidyl-prolyl cis-trans isomerase precursor [Acetobacter pasteurianus IFO 3283-01-42C] gi|256656068|dbj|BAI21995.1| peptidyl-prolyl cis-trans isomerase precursor [Acetobacter pasteurianus IFO 3283-12] Length = 352 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 35/283 (12%), Positives = 74/283 (26%), Gaps = 50/283 (17%) Query: 42 IRTTINGEVITDGDISKRIALLKLQK---INGELEKIAVQELIVETLKKQEIEKSGITFD 98 + T+NGE IT D+ + L Q + + V +L + +K G+ Sbjct: 93 VVATVNGEKITLSDVQTAMISLPPQMRQLPPNLIFPMLVNQLADQKAILITAQKEGLDKK 152 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 T ++ + M + Sbjct: 153 PETQQMMVNAS------------------------------NTALQNAWLSEQVMPHLTD 182 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 ++ ++ +E R +L + D + Sbjct: 183 DAIKQYYDQNYAGKPAEKEVHARHIL-----------VKTEAEANDVIKKLKAGADFGKL 231 Query: 219 LEKFA--SKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNT-TNPYVTQKGVEYIAICD 274 + + G + ++D+ P F + + + P +Q G I + D Sbjct: 232 AAHVSTDKGSAQQNGGDLGWFKKTDMIPAFSDAAFAMKKGEISSTPVKSQYGYHVIQVLD 291 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 R + + I+K+ E V K + I + Sbjct: 292 TRTDPV--PTLDAVRDKIRQALIQKYVREAVDKATNQVKIVRF 332 >gi|85058653|ref|YP_454355.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Sodalis glossinidius str. 'morsitans'] gi|84779173|dbj|BAE73950.1| peptidyl-prolyl cis-trans isomerase D [Sodalis glossinidius str. 'morsitans'] Length = 617 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 33/395 (8%), Positives = 105/395 (26%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + + + F + + +Y +NG+ I+ + + + Sbjct: 1 MMDNLRAAANHVVLKIILGLIAFSFVLTGVGNYLIGGDGDY-AAKVNGQQISRSQLEQAV 59 Query: 61 ALLKLQKINGE-------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + ++ + + + +LI ETL Q +K G+ + + Sbjct: 60 QNERNRQQEAMGEQFSQLAANEGYMRQQVLSQLIDETLLDQYADKLGLAISDDQIKQAIF 119 Query: 108 QHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN-------------- 150 F S + G+ + + + Q + +++ Sbjct: 120 AILAFRTEDKFDNAKFRSLIGNMGLSPDQYATLMRKQLLTQQLIQGIGGTGFLLPAETDR 179 Query: 151 ---------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + E++ N K + ++ + + + Sbjct: 180 LLEVAVQTREARLAMFAIAALAAKQTASDDEIQASYNAYKNQYLSPEAFKVSYIPMDAET 239 Query: 190 NKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKLE 220 + + Q+ ++ + + + Sbjct: 240 MQTKTTVDEQEIQAWYDQHHDQFTVPGRKRYSIIQSKSENDANDWLKQLQQGADFASLAK 299 Query: 221 KFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 ++ + + G ++ +SD + + + + + G I + D + Sbjct: 300 AHSTDVVSAKNGGDIGWMSDSDTLDELKQANLSQKGQLSGVIKSSVGFLIIRLDDMQPAQ 359 Query: 280 GE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 A+ ++A+ K +K+ A Sbjct: 360 VSPLSAVHDEVAAKVKQEKAIDAYYALQQKVSDAA 394 >gi|254472475|ref|ZP_05085875.1| peptidyl prolyl cis-trans isomerase D signal peptide protein [Pseudovibrio sp. JE062] gi|211958758|gb|EEA93958.1| peptidyl prolyl cis-trans isomerase D signal peptide protein [Pseudovibrio sp. JE062] Length = 289 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 34/317 (10%), Positives = 80/317 (25%), Gaps = 52/317 (16%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS----SRIRTTINGEVITDGDISKRIALLK 64 L F +L + + I V+ A + + + VIT+ D++ Sbjct: 2 LRKFTGILGSSVAVAALAISLNVAQAQDAETAPDLDKPVAKVGNSVITEADLAYAAQDYA 61 Query: 65 LQKI---NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 Q E K+ L+ L + E+ + + Sbjct: 62 QQLQRVPPTEWRKVLTDVLVEMKLLAEAGEEEKLAETDDFKR------------------ 103 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 + +++ + E++ + + E Sbjct: 104 ------------LMAFERTRALRNAYFQKYIQSAVTEDEVKAAYDAEYANYQGAPEINAA 151 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 +L + KD + ++ ++ + G + + Sbjct: 152 HIL-----------VEKEDEAKDIIKQLEGGADFAELAKEKSTGPSGPNGGDLGFFGKGQ 200 Query: 242 LHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 + P+F+ T P TQ G I + R Q + Sbjct: 201 MVPEFETAAFALKPGEFTKEPVQTQFGYHVILNKEARTQPA--PTLEAAEGQIRQELVLA 258 Query: 300 HEAEYVKKLRSNAIIHY 316 E +++L++ + Sbjct: 259 KFREVLEELKAKNTVEI 275 >gi|15613740|ref|NP_242043.1| protein secretion (post-translocation chaperonin) [Bacillus halodurans C-125] gi|46397037|sp|Q9KDN4|PRSA_BACHD RecName: Full=Foldase protein prsA; Flags: Precursor gi|10173793|dbj|BAB04896.1| protein secretion (post-translocation chaperonin) [Bacillus halodurans C-125] Length = 333 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 99/303 (32%), Gaps = 25/303 (8%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L I+ + S + ++G I+D + + +LK + L+ Sbjct: 3 KRHLLIAGLACMTILGACNNDDAGSSGQAVVEVDGHEISDAEF---VDMLKERYGEAILQ 59 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++ + LI + EI + I + T E + ++ GI + Sbjct: 60 ELVQRHLISQAADSVEIPQEEIDEELETFKSQIGVE-----TDDEMLDALSNQFGITVEN 114 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 ++++ + P V++ + + E A + ++ + ++ Sbjct: 115 KEEFVNEYILPPLVLEKLAVEGVEITDEEKQAYFDENRDSLIEVEASHILV--------- 165 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL-LK 251 ++ ++ + +++ + G + + D+ P+F+ Sbjct: 166 ---EDEETAEEVLDRLEAGDDFAELASEYSVDPSAEANNGDLGFFGKGDMVPEFEEAAFN 222 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + P + G I + D++D L+ + + E ++ L + Sbjct: 223 MEIDEVSEPVESTYGYHIILVTDRKD--SYEELEEKIHDTLMRERSRTQ-EEVLRDLLAQ 279 Query: 312 AII 314 A I Sbjct: 280 ADI 282 >gi|268679964|ref|YP_003304395.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfurospirillum deleyianum DSM 6946] gi|268617995|gb|ACZ12360.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfurospirillum deleyianum DSM 6946] Length = 270 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 89/306 (29%), Gaps = 46/306 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKINGEL 72 + + I C V +S + + T+NGE +TD DI+ + + K + + + Sbjct: 1 MKKVILSGIACAVLGMSLNAA-----VYATVNGEDVTDQDIAVLMRAMQGAKFESLPADA 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ V++ + L +E KSG+ + + Sbjct: 56 KQKIVEQAVERKLLTKEAVKSGVEKEKEYTDAL--------------------------- 88 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + ++ E+ K + ++ ++ + + Sbjct: 89 ----KRIKEDLSLELWMKKIYNNVKVDAKEVKDYYDKNADKFMQPATVKARHILVKSEEE 144 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 + ++ + ++ G + + + F + Sbjct: 145 AKAAIKELSGLSGQKLNDKF---VELATTKSTGPSGQGGGDLGWFAANQMVKPFADAAFA 201 Query: 253 -SQNNTTN-PYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + T P TQ G I + D + + +K + K A +KL Sbjct: 202 LKKGEYTKSPVQTQFGFHVILVEDTKAAEKASFEMVKPQIENGLKMEKFRVEVANKAQKL 261 Query: 309 RSNAII 314 R A + Sbjct: 262 RQGAKV 267 >gi|90410786|ref|ZP_01218801.1| putative peptidyl-prolyl cis-trans isomerase D [Photobacterium profundum 3TCK] gi|90328417|gb|EAS44715.1| putative peptidyl-prolyl cis-trans isomerase D [Photobacterium profundum 3TCK] Length = 623 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 36/406 (8%), Positives = 96/406 (23%), Gaps = 94/406 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + ++ F + SY + S ING I+ + + Sbjct: 1 MMERLREGVNSIWVKVILGLIIFSFVFAGVGSYLAGG-SQPAAAKINGTEISQNEFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELI-----------------VETLKK 87 + + + + + + +I E ++K Sbjct: 60 QNERNRMQSQLGDYFSTLLGDPEYVKQFRQSVLDRMINDVLIEQRATELGLRISDEHIRK 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI---- 143 D N + R +G + + F+ ++ + Sbjct: 120 TITSMPEFQRDGKFDNDSYTMLLRRSGFTPDQFAEYMRTDMLRTQFLTAIQGSDFALDSE 179 Query: 144 ---------WPDVVK------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS-- 186 VV+ DF + E ++ + R ++ Sbjct: 180 LTALRKLEAQQRVVRSLTLDLADFTKNATVTDEEAKVFYEQNPQMFTRPEQVKVAYIELS 239 Query: 187 -----------------IPDNKLQNQGFVQKRIKDAEESRLRLPKDC----------NKL 219 + +++R + + Sbjct: 240 GEGLKDTLDVSDEDVKAYYEEHKDKYSSIEQRQVSHILVQGDNADAKAKAEALKAELDAG 299 Query: 220 EKFA--------SKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEY 269 F+ GK + + P F++ + + + + G Sbjct: 300 ADFSELALSSSDDTYSAKDGGKLDWFERGVMDPAFEDAAFGLANSGDVSGVVKSSFGYHI 359 Query: 270 IAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 I + + + + A + + + +H + KL A Sbjct: 360 IKLDAVKASQVKPFADVSAEIIVELREQQAAEHFYDMQTKLAETAF 405 >gi|134293907|ref|YP_001117643.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia vietnamiensis G4] gi|134137064|gb|ABO58178.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia vietnamiensis G4] Length = 321 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 40/319 (12%), Positives = 95/319 (29%), Gaps = 41/319 (12%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M +K+ T ++ + + + + + ++ +T DI+ + Sbjct: 26 MMTKMKTR-------------ALVTAGLLLAAPLAAHAQDDVIASVAQASVTQADIAGVL 72 Query: 61 ALLKLQKING-ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 + + + A+ +++ TL + A++ G + Sbjct: 73 KAVNAEGRERLAADPAALDQVVRATL----------------AQKAVLAEAKSKGWEKDA 116 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 +Q D + YLA V + E++ + + T R Sbjct: 117 QVQAAIEQARRDIVARSYLAS-------VSAPPADYPSDAEIQSAYEQNRAALTTPRALH 169 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLL 238 + + ++P N ++ +R R + + G ++ Sbjct: 170 VAQIYIAVPSNADAATLEAARKRAADLANRARSGDFAALARANSQDAASAANGGDLGFVP 229 Query: 239 ES-DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPT 295 +S L Q + P T G + + D R +K L Sbjct: 230 DSLMLPAVRQAADALKPGQVSAPVRTPSGFHVVKLIDVRAAAPRPLADVKEQLRTMLRAQ 289 Query: 296 KIEKHEAEYVKKLRSNAII 314 +++++ Y+ L +NA I Sbjct: 290 RMQQNARTYLANLAANAPI 308 >gi|240849866|ref|YP_002971254.1| peptidyl-prolyl cis-trans isomerase [Bartonella grahamii as4aup] gi|240266989|gb|ACS50577.1| peptidyl-prolyl cis-trans isomerase [Bartonella grahamii as4aup] Length = 317 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 31/290 (10%), Positives = 70/290 (24%), Gaps = 48/290 (16%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISK---RIALLKLQKINGELEKIAVQELIVETLKKQ 88 + + S + I+G+ IT G + I + + + + ++ + + Sbjct: 41 ASEKAVSPSHVMAVIDGKNITAGQLDDLALEINPNLARFPDEQRRMMVLKAYLDMQALAK 100 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 G+ + + Sbjct: 101 AARSKGLDKTEAYDKR------------------------------MAVMRDNVLQQLYF 130 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 K + K + ++E ++ E R +L + Sbjct: 131 KQAIVDKISDTDLEALYKEEVAALPKEDEVKARHILVKTRKEAEA-----------IIKH 179 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKG 266 + +K ++ G Y + F++ T P + G Sbjct: 180 LNKGENFEEIAKKSSTDGSAAVGGDLGYFSHGQMVKPFEDAAFGLKIGEYTKQPVESPFG 239 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D+R + I+K E + LRS + Y Sbjct: 240 WHIIKLEDRRLKQP--PAFDDVKEMLRTQLIKKRYQELIVDLRSKMDVKY 287 >gi|293605682|ref|ZP_06688060.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC 43553] gi|292815920|gb|EFF75023.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC 43553] Length = 684 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 43/412 (10%), Positives = 103/412 (25%), Gaps = 98/412 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +++L+ ++ F +V I Y S+ T+ G+ I+ + + Sbjct: 31 MFEFIRSH-RRWMQLILLLLIVPSFFLVGIQGYDSFMRKEPELATVAGQPISRAEFDQAH 89 Query: 61 ALLKLQKINGE-------------LEKIAVQELIVETLKKQEIEKSGITFDSN---TVNY 104 Q + L + + +LI + L + Sbjct: 90 RNQLEQMRQRQGARFDPAVSDTPALREGLLNQLINQRLLANVAVDNRFNVSDETLRNTIA 149 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK--------------- 149 + N S E + L QG+ F+ L V+ Sbjct: 150 AIPEVQDNGRFSPERYRQVLAAQGMSPTSFEAGLRRDLAVGRVLDPVGQSARAPAEVVAS 209 Query: 150 ------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV-------- 183 D+ + +I A K ++ Sbjct: 210 LESALTQQRTVQLRRFAAEDYRSQVTVSPADIQAWYDANKQQLQIPEQVQVQYLVLDEAA 269 Query: 184 ----LFSIPDNKLQNQGFVQKRIKDAE----------------------------ESRLR 211 + ++ + R E + + Sbjct: 270 ATQGIQVKDEDLASYYEQNKNRFGQPERRRASHIMIELAPGASEEARKAARAKAEDLAKQ 329 Query: 212 LPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLH-PQFQNLLKKSQNNTTNPYVTQK 265 D +K + A G +L L P + + ++++ + + Sbjct: 330 AAADPSKFAELATKNSQDAGSASKGGDLGWLAPGMLSGPLEKAIFGQAKDQVSGVVESPA 389 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G+ + + + + + + Q T ++ A + ++ S Y Sbjct: 390 GLHIVKVTEIQPAAIKPLA--EVKDQITSEVRKQLAAVHFSEMASQLNKQVY 439 >gi|159897379|ref|YP_001543626.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Herpetosiphon aurantiacus ATCC 23779] gi|159890418|gb|ABX03498.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Herpetosiphon aurantiacus ATCC 23779] Length = 315 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 28/311 (9%), Positives = 80/311 (25%), Gaps = 33/311 (10%) Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI-------SKRIALLKLQKINGE 71 + ++ I+ + S++ + IT+ + S I Sbjct: 8 LLLCLVIAILAGCGSEITTSQSKVLVEVGNSSITEAEFTTFLDLNSNIINQNASGLDANT 67 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + + ++I++ + +E K G DS + + + G ++ + Sbjct: 68 TRQQLLDQMILQKVILEESAKLGAGIDSVSAEQTTMMIDQAVGKEKPTYADYEAFAKENR 127 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + + K + + + Sbjct: 128 FGTVESMRAYVA-QILTYESYAQKLEVPSA----------------TPQFHLFHILLSSD 170 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL----HPQF 246 ++ ++ +++++ + G + + Sbjct: 171 TVSESVALEQANQVLAQLKTGEDFSILAQQYSADPGSGSNGGDLGWYTQEQYAGFVPEFA 230 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 L + P TQ G I I + R+ + + + V+ Sbjct: 231 AALNTLEIGQLSEPVKTQFGYHIIKITESRNAISFGTFQE----LMDSPEGNAYIQSKVE 286 Query: 307 KLRSNAIIHYY 317 + R N +I Y Sbjct: 287 EYRKNDLIKNY 297 >gi|260433485|ref|ZP_05787456.1| ppic-type ppiase domain protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417313|gb|EEX10572.1| ppic-type ppiase domain protein [Silicibacter lacuscaerulensis ITI-1157] Length = 417 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 94/256 (36%), Gaps = 6/256 (2%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 S +N +++T ++ +R L+L I G E + LI E L+KQ + ++ Sbjct: 35 ASAQSPFSPAIRVNQDIVTWYELEQRQRFLELLGIPGSSEAEVRKALIDERLRKQAMREA 94 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 GI V + A LS E+F + L G+ + Y+A Q W D V F+ Sbjct: 95 GIQSAPEDVQLAIDEFAARGQLSPEEFLAALSDAGVAPETVRDYVASQLAWRDYVSARFI 154 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + + EI + ++ L ++ P Q + ++ + Sbjct: 155 SQARPTQDEINRALGQAGGGGLQVLLSEIIIPVTPQTLGQAEALAEE-----IAQVKSVD 209 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAI 272 ++++ + G+ +L ++L P Q ++ T+P V + Sbjct: 210 AFSAAATQYSAAPTRENGGRLDWLNITNLPPVLQPIILGLKTGEVTDPLTLPNAVALFQL 269 Query: 273 CDKRDLGGEIALKAYL 288 R++ + + Sbjct: 270 RGLREVATGTPRYSKI 285 Score = 42.0 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 32/80 (40%), Gaps = 3/80 (3%) Query: 238 LESDLHPQFQ-NLLKKSQNNTTNPYVTQKG--VEYIAICDKRDLGGEIALKAYLSAQNTP 294 S++ L K N + G + ++ +C + GE + ++ T Sbjct: 335 SPSEIPRDIALELAKLDPNEVSTTLTRNNGQTLVFLMLCGRTRDLGENTSREDVANALTQ 394 Query: 295 TKIEKHEAEYVKKLRSNAII 314 +++ +++LR++A I Sbjct: 395 QRLQAFADSLLEQLRADAAI 414 >gi|110636616|ref|YP_676823.1| peptidyl-prolyl cis-trans isomerase [Cytophaga hutchinsonii ATCC 33406] gi|110279297|gb|ABG57483.1| peptidyl-prolyl cis-trans isomerase (survival protein) [Cytophaga hutchinsonii ATCC 33406] Length = 452 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 30/280 (10%), Positives = 91/280 (32%), Gaps = 16/280 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS------KRIALLKLQKI 68 +L Y + + + + +I ++ +++ ++ R ++ + Sbjct: 5 MLLRYLFVFFVFVTNYHFCAAQQVIDKIVAKVDNQIVLKSEVEISYLQFMRSPEAQMMQT 64 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF----VQHARNTGLSAEDFSSFL 124 +++ ++ LI+ + +T + +N + G A+ S + Sbjct: 65 TDDIKCRVLESLIINKMLLARAVMDSVTVEREIINQQIDRRMDYFIQQFGTVAKLESYYN 124 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + Q + ++++ ++ + + ++ + + Sbjct: 125 KSIDQLKEELYPQIRDQMVTQK-MQDNITAGVTITPNDVKKFYKALPADSLPYFSSEVEV 183 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 I N+ K + EE R R C ++F+ + G+ + + Sbjct: 184 GQIIRLPEINRQDQLKFKQKLEEIRQRVASGEDFCRLAKQFSQDPVSAKNCGEIGFFKKG 243 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG 279 +L P+++ K T+ TQ G + + ++R Sbjct: 244 ELVPEYEAAASKLQPGQTSGVIETQYGYHIVQLIERRGAE 283 >gi|293603952|ref|ZP_06686366.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC 43553] gi|292817645|gb|EFF76712.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC 43553] Length = 258 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 99/305 (32%), Gaps = 52/305 (17%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELE 73 + +L C++ + ++ T+NG+ I ++ + + LL Q + +L Sbjct: 1 MKRIVMLAAACVIAVPAFAQN------VATVNGKAIPQKNLDQFVKLLVSQGATDSPQLR 54 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + QE+I + Q E SGI ++ Sbjct: 55 EQVKQEMINRQIFVQAAESSGIAKQADVQTEI---------------------------- 86 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 LA Q I + D++ K + ++ A +K+K + + + D K Sbjct: 87 ---ELARQGILVRALMADYLAKNPVSDAKVTAEYEKIKKEQAGKMEYKVRHILVEDEKTA 143 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 N Q + K + +K + G + ++ F + + Sbjct: 144 NDLLAQIKSNK--------SKFDDLAKKNSKDPGSAEKGGDLGWAPPTNYVQPFAQAVTQ 195 Query: 253 SQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + P TQ G I + D R + E + Q ++ A+Y K+LR Sbjct: 196 LKKGQLVDKPVQTQFGWHIIMVDDTRPV--EFPPLDQVRPQLEEMLRQQTLADYQKQLRD 253 Query: 311 NAIIH 315 A I Sbjct: 254 KAKIQ 258 >gi|301059212|ref|ZP_07200150.1| PPIC-type PPIASE domain protein [delta proteobacterium NaphS2] gi|300446702|gb|EFK10529.1| PPIC-type PPIASE domain protein [delta proteobacterium NaphS2] Length = 343 Score = 94.7 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 35/320 (10%), Positives = 89/320 (27%), Gaps = 19/320 (5%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ L + + + + +T + + + L Sbjct: 24 IFKRKSNIFYTLFLLVTAFGGLFFVEGCDRIGKDPGPVVLVVGDQQLTADVLKQNLLLAS 83 Query: 65 LQKI-----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 ++ + +I L + ++ GI + + G S Sbjct: 84 EDLPIPAKETENIKTALLDNIIDRYLILEYAKQHGIVVSEKEFQARLIDIKK--GYSESL 141 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 F L ++ + + + Q + V+ + E+ A + N Sbjct: 142 FEEMLLRKWGDPDVWMKRFKEQIVIEKVINAVTVHMEPPDYKEMKARFESNPNHYKAPEE 201 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 IR +K+ + + K++ V G+ ++ + Sbjct: 202 IRFRQIFCR---------TKKKANELYGKIRSGESLASLARKYSEGPEAVDGGEVGWVAK 252 Query: 240 SDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTK 296 L + L + + + + G + D+R G + + T+ Sbjct: 253 GILDESLDKMLFQMAPGDISPVTKGASGYHIFEVMDRRPGGFRAFSEIIDGIEEDLCQTR 312 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 E+++ LRS+ + Sbjct: 313 RMSFIKEWLQSLRSDIRVKI 332 >gi|224418500|ref|ZP_03656506.1| cell binding factor 2 precursor major antigen PEB4A [Helicobacter canadensis MIT 98-5491] gi|253827813|ref|ZP_04870698.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313142030|ref|ZP_07804223.1| cell binding factor [Helicobacter canadensis MIT 98-5491] gi|253511219|gb|EES89878.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313131061|gb|EFR48678.1| cell binding factor [Helicobacter canadensis MIT 98-5491] Length = 271 Score = 94.7 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 88/301 (29%), Gaps = 42/301 (13%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQKINGELEKIAVQE 79 I+ V S + +NG+ IT+ DI+ + + ++ E + V + Sbjct: 4 ILLSSVVAFSLLQGVSFAETFAKVNGDEITEKDIAALMRAMPGVSFAQLPQEAKDQVVNQ 63 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 + L + +K G+ Sbjct: 64 AVERKLLIAQAKKEGVEKSKEFKEAL-------------------------------ESV 92 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + +V M K EI + K V+ + + Sbjct: 93 KEDLALEVWMRQEMGKVKVSSSEIEKFYNQNKTKFVQPETAKVKHILVSSEADAKNIIAD 152 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT 258 + + + K + + + G+ ++ + + P+F + K ++ T Sbjct: 153 LK----KAGKNVASKFEEFAKAKSKDGSAQNGGELGWIAKGQVVPEFADAAFKLNKGQYT 208 Query: 259 N-PYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 P TQ G I + DKR + + TK +++ + + LRS A + Sbjct: 209 QTPVKTQFGYHVIYVDDKRPTTTLALKDVSGQIEQNLKLTKFQENVRKEGQDLRSKAKVE 268 Query: 316 Y 316 Sbjct: 269 I 269 >gi|320333920|ref|YP_004170631.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus maricopensis DSM 21211] gi|319755209|gb|ADV66966.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus maricopensis DSM 21211] Length = 639 Score = 94.7 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 93/321 (28%), Gaps = 26/321 (8%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--KRIALLKLQKIN 69 I L + ++ P++ +NG VITD D+ +R + + Sbjct: 18 LIVLAVMLVLGMVASFTPLLGNLGGQNKGNPAVKVNGTVITDQDLESVRRGNPVLGLTQD 77 Query: 70 GELEKIAVQELIVETLKKQEIEK--SGITFDSNTVNYFFVQHARNTG-LSAEDFSSFLDK 126 G L ++ +++ +++ S VN + G S +++ L + Sbjct: 78 GVLGDDFKTAIVESKVQETLLKQGASDQQVSRAEVNDAVSKLREQLGLKSNKEWVDRLQQ 137 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 G D F++ Q W +K E + E I + Sbjct: 138 YGFTDASFREAQRTQLAWQKKLKALQDATPKGTPAEAQLYYTLHPDEFKSEARIVGRQIA 197 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD----- 241 + Q Q + D KL S ++ G + + Sbjct: 198 VSSEAKAKQLLAQA----------KGGADFAKLASENSTVNKDRGGALGPIENGEPKPVA 247 Query: 242 ---LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPT 295 L + + +Q T+ + + + A+++ T Sbjct: 248 KITLPAEVGEAAFALTQGGLTDVVKSGDKFYIVKVERFVPASTQPFEAVRSKAIDAVTKQ 307 Query: 296 KIEKHEAEYVKKLRSNAIIHY 316 K + + LR+ A + + Sbjct: 308 KQDAAVEAWYTDLRNKANVEF 328 >gi|84387739|ref|ZP_00990755.1| peptidyl-prolyl cis-trans isomerse D [Vibrio splendidus 12B01] gi|84377422|gb|EAP94289.1| peptidyl-prolyl cis-trans isomerse D [Vibrio splendidus 12B01] Length = 621 Score = 94.7 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 35/403 (8%), Positives = 94/403 (23%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY + + I G+ + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYI-TGGGNNAAAKVGNTEIARGEFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + K + +I + L +Q+ E G+ + + Sbjct: 60 QNERNRMQSQLGDYFAQMLADPAYVESFRKSVLDRMINDVLLEQQAESLGLRISDSQIRT 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK------ 155 ++ + E + S L + G F +Y+ + +V + Sbjct: 120 MILEMPQFQTAGQFDQEVYQSALRRAGFSAESFAEYMRRDLMRNQLVTALQGSEFVLQGE 179 Query: 156 ---------------------------YGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 + +I + R + Sbjct: 180 IDTQSKLIAQTRDIRTVTLSVADLAKGIELTDEQIEQYYSENPQAYTRPEQAKVSYIELS 239 Query: 185 ---------------FSIPDNKLQNQGFVQKRIKDAE--------------ESRLRLPKD 215 L ++R + Sbjct: 240 AEALKSQLEVSDEEAQKYYQEHLDKYSTEEQRKVSHILVQGDDEAKAQSILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 E+ + G ++ + P F++ ++ +TT + G I + Sbjct: 300 ATLAEEKSDDFGSADVGGDLGWIERDVMDPAFEDAAFALENIGDTTGLVKSDFGYHIIKL 359 Query: 273 CDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + + A + + E +L A Sbjct: 360 DEVKASQAQPYTEVAAEIKQELLDQHAVDQFYEQQTELEKVAF 402 >gi|261253455|ref|ZP_05946028.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio orientalis CIP 102891] gi|260936846|gb|EEX92835.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio orientalis CIP 102891] Length = 619 Score = 94.7 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 42/406 (10%), Positives = 102/406 (25%), Gaps = 92/406 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY ++ + I G+ + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYIVGGSNNT-AAKVGNVEIGRGEFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q E G+ V Sbjct: 60 QNERNRMQAQLGDYFSNLLADPSYVESFRKSVLDRMVNDVLLEQHAESLGLRVSDTQVRT 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 ++ + E + + L + G F +YL + ++ Sbjct: 120 LILEMPQFQIDGKFDQEIYQTALRRAGFNAESFAEYLRRDLVRNQLLTAIQGSDFTLPSE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 DF K E EI ++ R ++ + Sbjct: 180 VEAQSKLLTQTREVKKVTLSLEDFAAKAQLSEDEINDYYKQNPERYTRPEQVKVAYIELS 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 +L++ V Q + + + Sbjct: 240 AQQLKDDIQVSEEQAKQYYQEHLDKYSSEEQRRVSHILVEGDDQAKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 E+ + G ++ + P F++ +TT + G I + Sbjct: 300 ATLAEEKSDDFGSASEGGSLGWIERDVMDPAFEDAAFALTKVGDTTGLVKSDFGYHIIKL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +D + A + + + E +L A Y Sbjct: 360 DELKDSVAKPYAEVAAEIKQELKDQQAVDQYYELQSELEKVAF-EY 404 >gi|294497370|ref|YP_003561070.1| foldase protein PrsA [Bacillus megaterium QM B1551] gi|294347307|gb|ADE67636.1| foldase protein PrsA [Bacillus megaterium QM B1551] Length = 307 Score = 94.7 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 89/309 (28%), Gaps = 33/309 (10%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 + L T ++ + + SS++ IT GD+ K++ Q Sbjct: 3 KSLVALTTAASLVALSACSGGNDASNANDSSKVIVETKAGNITQGDLYKQMKDTIGQDQF 62 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 L + +E ++ ++ G + Sbjct: 63 NTLVRSVTEEKVLSK---------KYKVTDKELDQQLNILREQYGDQVDSV--------- 104 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 ++ + + + + E+ + K + ++ Sbjct: 105 IKQKGEKEVKDMLKVDILREKAATAGIKVSDKELKKAYDEYKAQKPQIRASHILV----- 159 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN 248 +K + E + + +++++ + G Y E + +F+ Sbjct: 160 -------KDEKTANEVEAKIKKGEDFASLAKEYSTDQQSAANGGDLGYFGEGQMVKEFEE 212 Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH-EAEYVK 306 K + + P T+ G I + DK+ + K L Q +K+++ + ++ Sbjct: 213 AAYKLKKGEVSKPIKTEYGYHIIKLVDKKKVESFEKKKPELEQQIKRSKVDQAEANKKIQ 272 Query: 307 KLRSNAIIH 315 K A + Sbjct: 273 KELDKAKVE 281 >gi|254492046|ref|ZP_05105223.1| PPIC-type PPIASE domain protein [Methylophaga thiooxidans DMS010] gi|224462743|gb|EEF79015.1| PPIC-type PPIASE domain protein [Methylophaga thiooxydans DMS010] Length = 613 Score = 94.7 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 43/384 (11%), Positives = 107/384 (27%), Gaps = 91/384 (23%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN----- 69 L + I F + + SY + A S + +NG+ IT ++ + + + Q N Sbjct: 1 WLIVGLISIPFALWGVNSYLTGA-SDVVVAEVNGKEITQAELQQSLQQYRDQMRNMMGEQ 59 Query: 70 --------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAE 118 +++ + LI + L + EK G + ++ R+ AE Sbjct: 60 FDPAMFEGAMVKRNVLDGLIEQQLLRDANEKLGQRINDAEISQVIRTTPAFQRDGEFDAE 119 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------------------------- 149 ++ L + G ++ L + + + Sbjct: 120 YYNMVLARVGYSPASYEAQLRADLMSQQLTQNIETTALATEKDVRQTLRLQEQRREIAYG 179 Query: 150 ----NDFMLKYGNLEMEIPANKQKMKNITV-----------------------------R 176 +++ + + E+ ++ + Sbjct: 180 VVPVQEYVEQVSVTDDEVQQLYDNHQSNYQSPEQLKLNYIELSVATISSTLTVTEDDLKQ 239 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAE-------ESRLRLPKDCNKLEKFASKI-HD 228 Y F P + + ++ DA+ + E+ + Sbjct: 240 FYADNQSQFVGPQQRRASHILIEGDDNDAQTTIEAIATRLENGEDFSSLAEELSQDPGSA 299 Query: 229 VSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGG--EIAL 284 G + + P F+ ++ + + P T+ G I + D + G + Sbjct: 300 SQGGDLGFFERDVMDPAFEEAAFALETIGDVSEPVKTEFGYHLIKLTDIKQPEGQEFSQV 359 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKL 308 + + + E + ++L Sbjct: 360 RDEVEKLYRRQQAESIFYDKAEQL 383 Score = 37.7 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 35/127 (27%), Gaps = 5/127 (3%) Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKK 252 ++ ++ ES L+ K N+ + ++ + L F + Sbjct: 481 FEKASEKAREHGESVLKELKQGNQATDLLPTWQEAEFYGRESDNISMQILQRAFAMSKPE 540 Query: 253 SQNNTTNPYVTQKGVEYIA---ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 S + I + + + E + L Q T ++ LR Sbjct: 541 SGSKFAGFTANNGNYIVIELTAVDEGKPADVEAEDQQALKQQLTQVHANAEVQAFITSLR 600 Query: 310 SNAIIHY 316 A I Sbjct: 601 EQADIEI 607 >gi|260773190|ref|ZP_05882106.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio metschnikovii CIP 69.14] gi|260612329|gb|EEX37532.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio metschnikovii CIP 69.14] Length = 619 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 34/403 (8%), Positives = 101/403 (25%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y + + I+ G+ + Sbjct: 1 MMERLREGVNSIAVKIILGLIILSFIFAGVGNYI-VGGGNNAAAKVGKTEISRGEFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + L + + +I + L +Q + G+ N V Sbjct: 60 QNERNRMQSQLGDYFSTLLADPTYVASLRRSVLDSMINDILIEQHAQSLGLRVSDNQVRQ 119 Query: 105 ---FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 + + S L + G + F +Y+ + +V Sbjct: 120 AIIAMPEFQSAGQFDQNIYQSALRRAGFTPDAFAEYMRRSLVRDQLVAALQTSEFTLPGE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 DF + EI Q+ + R +R + Sbjct: 180 VEGLSALVAQARDVRTITLPTTDFAKDVQLTDQEIEQYYQQNDDRYTRPEQMRISYIELA 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 +L+ + ++ + + Sbjct: 240 AQQLKEAITITDEQTKAFYDAHQDKYASKEQRKVSHIMIQGDDEQAAQAILDQLHNGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + I G+ ++ + F++ + + + G I + Sbjct: 300 AQLAKEKSQDIGSSQEGGELGWIEPDTMDAAFESAAFALQQVGEISGLVKSDFGYHVIKL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + + + + A+ + + +L A Sbjct: 360 DELKAPVIKPYEQVAVEIKAELQDQQAVDRFYQLQTELERIAF 402 >gi|300857299|ref|YP_003782283.1| foldase protein [Clostridium ljungdahlii DSM 13528] gi|300437414|gb|ADK17181.1| foldase protein precursor [Clostridium ljungdahlii DSM 13528] Length = 341 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 32/330 (9%), Positives = 87/330 (26%), Gaps = 28/330 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSY----KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 IK L + +F A+++ T+NGE IT GD+ K ++L Sbjct: 4 IKRLVAAAFITVFAFSTAGCNMIEKTPEAIANSTVATVNGEKITRGDLDKDPNTIQLLSQ 63 Query: 69 NGEL------------------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 + ++ + +I + +Q+ ++ + D + + + Sbjct: 64 AKQQYGSDYAKNDEATSAIKTQKEQILDNMITTKVIEQKAKELKLLPDESKLKSDMDKKI 123 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + + + F + + N + K Sbjct: 124 DDIKKQNFKGDTSQFDAALKAQGFTEESFKTMFLAQLKTQAIETNISNYLAKSVKVTDKQ 183 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDV 229 + + + + + + ++ + Sbjct: 184 IKDYYNANKDKYTEQPDKMHLAHILVKTKDEAQKVKARLDKGEDFAKVAKEVSQDTATKD 243 Query: 230 SIGKAQYLL---ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIAL 284 G ++ + ++P + G I K++ + + Sbjct: 244 KGGDLGFVNYNDSGYDAQFMAGAKALKEGAISDPVQSSFGYHIIKCIKKQEYPVKDFNKV 303 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + Q + K ++ V++ + A I Sbjct: 304 KDDIKKQLESDQKSKLVSQKVQEWKKAASI 333 >gi|307129932|ref|YP_003881948.1| peptidyl-prolyl cis-trans isomerase D [Dickeya dadantii 3937] gi|306527461|gb|ADM97391.1| peptidyl-prolyl cis-trans isomerase D [Dickeya dadantii 3937] Length = 626 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 36/398 (9%), Positives = 107/398 (26%), Gaps = 87/398 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + ++ F + + Y +NG+ IT + + + Sbjct: 1 MMDNLRAAANNVVLKIILALIIGSFVLTGVGDYLIRGSGDY-AAKVNGQEITRAQLEQGV 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + ++ +L K + +LI ETL Q G+ V Sbjct: 60 QNERSRQQEMLGENFSALAANEGYMQQLRKQVLSQLIDETLVVQYAHTLGLNISDEQVKQ 119 Query: 105 FFV---QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + N + + + + + G+ + + Q+L Q + +++ Sbjct: 120 AIFSVPEFQTNNRFDNDKYLAQVRQLGLTPDAYAQFLRKQLLTQQLIRGLGNTDFVLQQE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS-- 186 + E+ + KN + + Sbjct: 180 LDNLVAMASQDRTIRTATIDLSARARNQTVSDEEVKNFYDQNKNRYLAPEQFKVSYIMLD 239 Query: 187 -----------------IPDNKLQNQGFVQKRIKDAEESR------------LRLPKDCN 217 + +++ + + + Sbjct: 240 AASIMDKTKVDNADIAAYYEQHKSEFTQPERKKYSVIQLKTEADAKAALEQLKKGADFAA 299 Query: 218 KLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ I + G ++ + + + K + ++ + G I + D + Sbjct: 300 LAKEKSTDIVSRRNGGDLGWMDDGSTVDEIKQAGLKQKGQLSDVIKSSVGYLIIRLDDIQ 359 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++A L+ + K +K+ A Sbjct: 360 AQHVKALDEVRADLAEKVKREKSLDAFYSLQQKISEAA 397 >gi|294678213|ref|YP_003578828.1| chaperone SurA [Rhodobacter capsulatus SB 1003] gi|294477033|gb|ADE86421.1| chaperone SurA [Rhodobacter capsulatus SB 1003] Length = 418 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 43/277 (15%), Positives = 90/277 (32%), Gaps = 2/277 (0%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + F LL + T+NG I+ +I++R ++L Sbjct: 2 MRHFPSLLGWVLTAGLALGTAAPLQAQATGDFAPAITVNGLAISGYEIAQRARFMELLGA 61 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 G++ K+A + LI + L+ + + GI+ V + A LSAEDF L G Sbjct: 62 TGDVRKMAEEALIDDRLQGWKAQSLGISVSREAVTRGMAEFAARANLSAEDFLKALAGAG 121 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDF-MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + ++ ++ IW +VVK + + + EI + ++ I Sbjct: 122 VEAQTYRDFVTSGVIWREVVKTTYGGGRIQISDAEIDRALAHEAPKGAEPEPPKVLISEI 181 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + + + ++ +S G+ ++ + L P+ + Sbjct: 182 VIRNFPGRDAETMAKARKAAAAKTEAEFAALAKELSSAKSAGQGGRLDWMPVTALPPEVR 241 Query: 248 NLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 + + P T V + + Sbjct: 242 ETVLGLRPGRASAPVETPNSVSVFFLRGLDEGAPLTP 278 >gi|330808576|ref|YP_004353038.1| peptidylprolyl isomerase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376684|gb|AEA68034.1| putative peptidylprolyl isomerase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 623 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 47/402 (11%), Positives = 113/402 (28%), Gaps = 89/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + + + +S +NGE I+ ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIVALMALTGFDAIFKATTNSNEAAKVNGENISQNELSQAV 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q + L A++ LI L Q + F ++ Sbjct: 61 DMQRRQLMQQLGKDFDASLLDEKMLRDSALKGLIDRKLLLQGAHDAKFAFSEAALDQVIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML---------- 154 + + S E F + + G F+Q LA + + + Sbjct: 121 QTPEFQVDGKFSPERFDQVIRQLGYSRMQFRQMLAQEMLIGQLRAGLAGSGFVTDAQVLA 180 Query: 155 ---------------------KYGNLEMEIPANKQKMKNITVREYLIRT----------- 182 + E+ A + + + Sbjct: 181 FARLEKQTRDFATLNIKADPASVKLTDDEVKAYYDQHAKEFMTPDQVVIDYLELKKASFF 240 Query: 183 --------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-------------- 220 L + ++ N ++ E ++ + K + Sbjct: 241 DQVSVKDEDLQAAYQKEIANLSEQRRAAHILIEVNDKVTEAQAKAKIEEIQARLAKGESF 300 Query: 221 -----KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC 273 +F+ + G Y P+F+ L +++ + P T G+ I + Sbjct: 301 EALAKEFSQDPGSANNGGDLGYAGPGVYDPEFEKALYALNKDQVSAPVRTDFGLHLIKLL 360 Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++ +LK L+ + ++E+ E K+L + Sbjct: 361 GVEAPEVPTFASLKDKLTRELKTQQVEQRFVEATKQLEDASF 402 >gi|257455283|ref|ZP_05620518.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enhydrobacter aerosaccus SK60] gi|257447245|gb|EEV22253.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enhydrobacter aerosaccus SK60] Length = 550 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 103/308 (33%), Gaps = 27/308 (8%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEKIAVQELI 81 + S + + +N I + + +A Q +L + +LI Sbjct: 133 VTSSSQDQLIDGVIAIVNDTPILRSQLDRAVAQASAQLQAQNKPVPPAQQLYPQVLDQLI 192 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSSFLDKQGIGDNHFKQYLA 139 + ++ I++ G+ + N VN A+ G++ AE ++ G +Q ++ Sbjct: 193 TKQIQLDLIKRQGLQAEENAVNAALTNLAQQNGVASLAEFQQKLDAQRAGGYQALRQKVS 252 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + + ++ + ++ + + RT+ +P Sbjct: 253 EDLAIQTLQQQQLASRIKISDQDVDNFLKSPESNALEKSQYRTLHIRVPFIADAAGKTSD 312 Query: 200 KRIKDAEESRLRLPKDCNK---------LEKFASKIHDVSIGKAQYLLESDLHPQF-QNL 249 K+ K A ++ K+ + A+ + G Y + ++L + +N+ Sbjct: 313 KQKKQALTVATQIAKNLQAENANIEQIMTDAQANYNAQIQGGDMGYHVAAELPTELSKNI 372 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT-------PTKIEKHEA 302 TNP T +G I + DKR +I + + ++ Sbjct: 373 TALEVGQVTNPIATAEGYNVIKLVDKRGGQQKIIDQWHTRHILISPSTALPADMAKQQID 432 Query: 303 EYVKKLRS 310 +KLR Sbjct: 433 TIYEKLRQ 440 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 51/147 (34%), Gaps = 3/147 (2%) Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSI 231 T I + +++I E + ++ + Sbjct: 402 QQKIIDQWHTRHILISPSTALPADMAKQQIDTIYEKLRQGEDFATLASTYSKDPGSASNG 461 Query: 232 GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLS 289 G ++ E D+ P F++++K++ N+ + P+ TQ G + + +KR K Sbjct: 462 GDLGWVSEGDMVPSFESMMKQTSVNDYSVPFQTQFGWHILKVDEKRQKDVSDVYRKNMAR 521 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++++ LR+ A + Sbjct: 522 EILYQRMAPQALDDWMQDLRAQAYVKI 548 >gi|227537536|ref|ZP_03967585.1| peptidyl-prolyl cis-trans isomerase [Sphingobacterium spiritivorum ATCC 33300] gi|227242673|gb|EEI92688.1| peptidyl-prolyl cis-trans isomerase [Sphingobacterium spiritivorum ATCC 33300] Length = 458 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 37/319 (11%), Positives = 104/319 (32%), Gaps = 21/319 (6%) Query: 16 LTTYFVLIIFCIVPI--VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGE 71 + +++FC++ ++ + R+ T+ +I DI + + Q N + Sbjct: 1 MIKQLCVLLFCVLGSINFTFAQGKIVDRVVATVGANIILQSDIDMQYSQNLAQGMSPNED 60 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + +Q+L+ + L Q+ I + V+ A Sbjct: 61 FKCYILQQLLTQKLLAQQAVLDSIEVSESEVDDNLNNRLNVMTRQAGGKERLESFLNRSL 120 Query: 132 NHFKQYLAI---QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +K+ + + + ++ + + K +E+ + + ++ + + I Sbjct: 121 LQYKEEMRTSVAEQLKAQKMQQNIVQKIDVTPLEVKRYFEGLNKDSLPYFDTEVEIGEIV 180 Query: 189 DNK---LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHP 244 + + +KR +D + + ++ V+ G + + Sbjct: 181 MYPVLTKEEKEASRKRAEDLRKQIVDGSDFGTIARLYSEDKGSAVAGGDLGFSTRDNYVK 240 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP-----TKIE 298 +F K + + T+ G ++ + ++R GE ++ P + + Sbjct: 241 EFSAVAFKLKPGEISQVFETEYGFHFLQVLERR---GEEVRARHILVSIKPTNASLERTK 297 Query: 299 KHEAEYVKKLRSNAIIHYY 317 +KL + I +Y Sbjct: 298 VKMDSLYQKLINK-KIDFY 315 >gi|299770418|ref|YP_003732444.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. DR1] gi|298700506|gb|ADI91071.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. DR1] Length = 436 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 38/314 (12%), Positives = 101/314 (32%), Gaps = 20/314 (6%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIA----LLKLQK- 67 K L +F + S S+A + + ++ VI D+ + +A L+ QK Sbjct: 4 KHLKQFFKATTLAALISSSMHSFAQPADEVVAIVDNSVILKSDLQQGMAEAAHELQAQKK 63 Query: 68 ---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSS 122 L+ + +LI+ + ++++K GI D ++N ++ A +G Sbjct: 64 EVPPQQYLQFQVLDQLILREAQLEQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQK 123 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + +A + + M + + ++ + + Sbjct: 124 LDAMAPGTYESLRGRIAEDLAISRLRQQQVMSRIKISDQDVENFLKSPQGQAALGNQAHV 183 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + I + Q V + ++ + L+K ++ V + SD+ Sbjct: 184 IHMRITGDNPQEVQSVAQEVRSKLAQSNDINV----LKKLSTANAKVDGADMGFRPLSDI 239 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD----LGGEIALKAYLSAQNTPTKI 297 + + + TT+ + GV + + +++ ++ Q + Sbjct: 240 PAELAARITPLQEGQTTDLISVRDGVHVLKLIERKQNEQKALVPQYQTRHILIQPSEVVS 299 Query: 298 EKHEAEYVKKLRSN 311 + + + + Sbjct: 300 LDNAKQIIDNIYKR 313 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 29/270 (10%), Positives = 90/270 (33%), Gaps = 6/270 (2%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 I+D D+ + + Q G + + + ++ + + N Sbjct: 158 KISDQDVENFLKSPQGQAALGNQAHVIHMRITGDNPQEVQSVAQEVRSKLAQSND-INVL 216 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + + +A+ + + + + D + I + + ++ G +++ KQ Sbjct: 217 KKLSTANAKVDGADMGFRPLSDIPAELAARITPLQEGQTTDLISVRDGVHVLKLIERKQN 276 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HD 228 + V +Y R +L + + ++ I + + +++ Sbjct: 277 EQKALVPQYQTRHILIQPSEVVSLDNA--KQIIDNIYKRLKAGDDFATLAATYSNDTGSA 334 Query: 229 VSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKA 286 G ++ + P+F + + + + P+ TQ G + + +KR+ + Sbjct: 335 RDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHILQVTEKREKDMTHEYQER 394 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +++++R+NA + Sbjct: 395 MARQILGERQFNTEIDSWLREVRANAYVEI 424 >gi|93006523|ref|YP_580960.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter cryohalolentis K5] gi|92394201|gb|ABE75476.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter cryohalolentis K5] Length = 465 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 57/163 (34%), Gaps = 3/163 (1%) Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 ++I K N T+ T + ++LQ +++I D Sbjct: 300 VTPEGIDIIKLANKKANDTMLVPQWNTRHILVKVDELQTDALAEQKINDLYSQLRNGAAF 359 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAIC 273 + ++ G ++ E + F+ ++K + + + P+ TQ G + + Sbjct: 360 DSLASTYSDDPGSAGRGGDLDWVGEDQMIAPFEAMMKNTAVGDYSAPFKTQFGWHILKVE 419 Query: 274 DKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIH 315 KR + + + + +++++LR+ A I Sbjct: 420 GKRQQDVSDEYRRTMARQALYQRLAPQAKEDWLQELRAGAYIQ 462 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 91/301 (30%), Gaps = 22/301 (7%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--------KINGELEKIAVQELIVET 84 + I +N I D+ IA + + + +L+ + LI+ Sbjct: 52 LTPANSTDGIIALVNENAILKSDLIAAIAQTQARAKAAGEPIANSAQLQSEVLNALILRE 111 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHAR--NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 L+ I++ G+ D ++N Q A+ A Q + L + Sbjct: 112 LQLSLIKRVGLNPDEASINKRLEQIAKAEGLNSIAALQQRLDSAQSGSYATLRAQLIEDA 171 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + E +I A + + + +TV +P ++ +R Sbjct: 172 AIQALQQRQITNRVRISEQDIDAFLASPEAKRLNQSEYQTVHVRVPYMDDYSRLSEAQRN 231 Query: 203 K--------DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + S + G + + L + + + K Sbjct: 232 DALKVAQKLRTRLLVPNVNVAEAIAASQGSYPIPLQGGDMGFHKAAALPTELSSEITKLE 291 Query: 254 QNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + P VT +G++ I + +K+ + ++ + + + + + L S Sbjct: 292 VGAVSAPLVTPEGIDIIKLANKKANDTMLVPQWNTRHILVKVDELQTDALAEQKINDLYS 351 Query: 311 N 311 Sbjct: 352 Q 352 >gi|317499572|ref|ZP_07957835.1| ppic-type ppiase domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|291559696|emb|CBL38496.1| Parvulin-like peptidyl-prolyl isomerase [butyrate-producing bacterium SSC/2] gi|316893121|gb|EFV15340.1| ppic-type ppiase domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 247 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 31/276 (11%), Positives = 74/276 (26%), Gaps = 38/276 (13%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98 + I + GE IT D+ IA L ++ + + + + + K G Sbjct: 3 NQNILAVVAGEEITQKDLDALIAALPKEQQAYAGNEHFRNQCLEQIITVHLFAKLGEELK 62 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 F A + + + Sbjct: 63 LEETEAFADNLAH-------------------------AKREILAQMALGEAMKDITVSE 97 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 E + + + + + +L D++ + Q ++K I + + Sbjct: 98 DEAKEYYKANENQFMAGETVHAKHIL---VDDEDKCQEILEKIIGEE-------TTFEDA 147 Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR- 276 ++F++ G + +F++ + P TQ G I + DK+ Sbjct: 148 AKEFSTCPSKEKGGDLGAFGRGQMVKEFEDAAFAAEVGHVVGPVKTQFGYHLIKVEDKKD 207 Query: 277 -DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + + K + +L+ Sbjct: 208 AETSVYEDVADTIKNIILQQKRNDVYGNKIAELKEK 243 >gi|327480677|gb|AEA83987.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas stutzeri DSM 4166] Length = 618 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 42/402 (10%), Positives = 108/402 (26%), Gaps = 89/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++++ + + + A +++ +NGE I+ D+ + + Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIVVLLALTGFDAIFNAASNAQNAAEVNGEEISRYDLDQAM 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q L A+ LI L Q + + F ++ Sbjct: 61 NMQRRQLAQQLGQDFDPSLLDDRLLRDAALGSLIDRMLLLQAAKGANFAFSREALDQLIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND------------- 151 + + + F + + G F+Q L + + + Sbjct: 121 QTPEFQVDGAFNPARFDQVIQQMGYSRLQFRQLLEQEMLIGQLRAGISGTGFVTDQQVQN 180 Query: 152 ------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRT----------- 182 + +I + + + Sbjct: 181 FARLEMQTRDFATLTVPAQHEAIEVSDDQINEFYEANADRFRTPEQVVVEYVELKKESFF 240 Query: 183 --------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--- 231 L + ++ N ++ E+ L D K + + Sbjct: 241 DQVEASDEELQELYQKQIANLAEQRRAAHILIETGGELSDDEAKAKIDEIAARVKNGEDF 300 Query: 232 -----------------GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC 273 G + P F++ L ++ + P ++ G I + Sbjct: 301 ATVAKEVSQDPGSANEGGDLGFAGPGVYDPAFEDALYALNEGEVSAPVKSEFGWHIIKLL 360 Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ ++K L + ++E+ E K+L A Sbjct: 361 GVQSPEVPSFESMKPELVRELKAQQVEQRFVETSKQLEDAAF 402 >gi|282855468|ref|ZP_06264788.1| foldase protein PrsA [Pyramidobacter piscolens W5455] gi|282586694|gb|EFB91942.1| foldase protein PrsA [Pyramidobacter piscolens W5455] Length = 303 Score = 94.0 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 36/297 (12%), Positives = 78/297 (26%), Gaps = 37/297 (12%) Query: 31 VSYKSWAMSSR-IRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQELIVETL 85 ++ + + + + T+ GE IT D+ + ++ Q+ + E + + LI Sbjct: 18 SAFAADQNADKKVLATVAGETITQADLDQAMSGFDPQQRAAYASPEGQAQLLDNLID--- 74 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 E K + +Q L Sbjct: 75 -----------------------FKVFARSGREQKLQNSPKYKEAMANLEQRLLFTLATE 111 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ--GFVQKRIK 203 ++ + + + ++ K +L N +K Sbjct: 112 KILDEAGKTPATDQDAQKYYDEHKEIFQVPAAIRASHILIRADKNMPAKDQKAAQEKAAD 171 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPY 261 + + + + ++ G Y + + P+F+ + T P Sbjct: 172 LIRDIKAGKTTFEDAAKNNSADGTRSRGGDLGYFSKGQMVPEFEKAAFALKKGEMTAKPV 231 Query: 262 VTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 T G I D RD +K + A K K + LR+ + Sbjct: 232 KTDFGYHVIKATDSRDASIRPFAEVKEDIKADLVRQKQVKAIQDERDALRARYGVKI 288 >gi|104781017|ref|YP_607515.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas entomophila L48] gi|95110004|emb|CAK14709.1| putative peptidyl-prolyl cis-trans isomerase D [Pseudomonas entomophila L48] Length = 619 Score = 94.0 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 50/402 (12%), Positives = 117/402 (29%), Gaps = 89/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++++ + + A S+ +NG+ I+ ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIVVLMALTGFEAIFQAATHSQDAAKVNGQTISQNELSQAV 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q + L + A++ LI L Q E + F ++ Sbjct: 61 DMQRRQLMQQLGKDFDPALLDEKMLREAALKGLIDRKLLLQGAEDAKFAFSEAALDQLIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM--- 161 + + SAE F S + + G G F++ LA + + + + + Sbjct: 121 QTPEFQVDGKFSAERFDSVIRQMGYGRMQFREMLAQEMLIGQLRTGLAGSSFVTDKQVEA 180 Query: 162 --------------------------EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + ++ + V+ I K Sbjct: 181 FARLEKQTRDFAALTFKADPAAVKVSDEEVKAHYDQHAKEFMTPDQVVIDYIELKKSAFF 240 Query: 196 GFV-------------------QKRIKDAEESRLRLPKDCNKLEK--------------- 221 V ++R + + + Sbjct: 241 DQVKVNDDELKALYEKEIANLGEQRHAAHILIEVNDKTTDAQAKARIEEIQQRLEKGEDF 300 Query: 222 ------FASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 F+ + G + P F++ K +++ + P TQ G + + Sbjct: 301 AKLAKAFSQDPGSANAGGDLGFAGPGVYDPTFEDALYKLNKDQVSAPVRTQFGYHLVKLL 360 Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + D+ +LK L+ + ++E+ E K+L A Sbjct: 361 GVQAPDVPSFASLKDKLTRELKTQQVEQRFVEATKQLEDAAF 402 >gi|254520524|ref|ZP_05132580.1| peptidylprolyl isomerase [Clostridium sp. 7_2_43FAA] gi|226914273|gb|EEH99474.1| peptidylprolyl isomerase [Clostridium sp. 7_2_43FAA] Length = 325 Score = 94.0 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 37/329 (11%), Positives = 92/329 (27%), Gaps = 31/329 (9%) Query: 11 DFIKLLTTYFVLIIFCIVPIVS----YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66 IK + L IF + A+ + + + IT G++ + Q Sbjct: 2 IKIKKIIAAGALSIFAFSAVGCEMIQKTPEAIKNTVLAKVGDVKITKGEVDEIADPYLQQ 61 Query: 67 ------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 + L A+ L+ E + ++ E+ G+T V+ ++ + Sbjct: 62 YGSDYDTNPNMAEQVKALRTQAINLLVEEKMMLKKAEELGVTPTKEEVDSEVQKYIESLK 121 Query: 115 LSAEDFSSFLD------KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 S F + + V D + +I A + Sbjct: 122 ESYGGDEQFNAALEQAGMTLDEYTTKLTESMKNKLATEKVTEDLFKDVNITDEDIKAYYE 181 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + K+ V+ ++ ++ + E+ A+ Sbjct: 182 ENKDSFGEANAEHIVV--------SDEAKAKEIRERIINGEDFATVAKESSEEPAAAESG 233 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 ++G ++ L + + P +Q G I + + +K + Sbjct: 234 GNLGVIKFNTTEYDQDFVAGLKALKEGEISEPVKSQFGYHIIRATKVKQGTFDE-VKDSI 292 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 K + + +++ + + + Y Sbjct: 293 KTTLENQKKNEIYSSSIEQWKKDYNVKIY 321 >gi|113867525|ref|YP_726014.1| peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha H16] gi|113526301|emb|CAJ92646.1| Peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha H16] Length = 264 Score = 94.0 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 90/308 (29%), Gaps = 51/308 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + TT + ++ S + A + +NG+ I+ + K IA Q N EL Sbjct: 1 MKTTVLSFSLAAVLAAGSLPAIAQN---AAVVNGKAISSAKLDKLIAGTG-QPDNPELRS 56 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A LI L QE K G+ Q Sbjct: 57 RARNMLIDRELLVQEANKRGL------------------------------TQRDDVQEQ 86 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + + + V + D++ +G + E+ K+K+ + Sbjct: 87 LEQARLNVLAGAVFE-DYVKTHGASDAELRKQYDKIKSQFGNGKEYHARHILVEKEADAK 145 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKK 252 + + K + + + + G + S P+F + Sbjct: 146 AIIAKIK---------GGAKFEDMAKASSKDPGSAANGGDLDWANSSSYVPEFSAAMTGL 196 Query: 253 SQNNTTN-PYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTK--IEKHEAEYVKK 307 + T+ P TQ G I + D RD +K L+ + + +K Sbjct: 197 KKGQLTDTPVKTQFGWHIIELVDVRDAKIPSFEEVKPQLTQMLMGDQNWQREQFQAMMKS 256 Query: 308 LRSNAIIH 315 L+ A I Sbjct: 257 LKDKAKIQ 264 >gi|114566203|ref|YP_753357.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337138|gb|ABI67986.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 324 Score = 94.0 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 85/309 (27%), Gaps = 35/309 (11%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKL---------------------QKINGE 71 + +S +N E+IT K LK ++ Sbjct: 20 GCNDKKASPSIAEVNSEIITQEQYDKACQNLKQAYEVQNPAQSGDKADSSGKIDSEMEKR 79 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L+ A L+++ L +Q+ EK GI ++ N +D ++ + Sbjct: 80 LQDQAFDSLVMQALLRQDAEKRGIKIKEKEIDVAIDSFKANLAAEGKDAYQKFLQENNLN 139 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + A + + ++ E E+ Q+ ++ Sbjct: 140 EKELREEARMQLLVNQLQKKINASITIEEEELQQYYQENIASFQEAAGMQISHIL----- 194 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD--LHPQFQNL 249 K ++ + ++ +S G + E+ + Sbjct: 195 ----VATDKEARELLTQLQQGADFAQLAQEHSSCASKAQGGYLGVVNENSNYVPEFKNAA 250 Query: 250 LKKSQNNTT-NPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVK 306 L+ T P + G I + +K + Q K ++Y++ Sbjct: 251 LQLKAGEITQEPVKSDFGYHIIKAGQLQPTTTKSFDEVKNQIRMQLEKEKENTLFSQYME 310 Query: 307 KLRSNAIIH 315 LR A I Sbjct: 311 DLRQQAQIK 319 >gi|330996060|ref|ZP_08319954.1| PPIC-type PPIASE domain protein [Paraprevotella xylaniphila YIT 11841] gi|329574057|gb|EGG55635.1| PPIC-type PPIASE domain protein [Paraprevotella xylaniphila YIT 11841] Length = 459 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 89/302 (29%), Gaps = 17/302 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 ++ F KLL + L + + + + + + E I D+ I Sbjct: 1 MNLFKKLLYAFVFLFGGIQMHLFAQSPNNVVDEVIWVVGDEAILRSDVEAARMDFGA-NI 59 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 +G + ++L ++ L + + + D++ ++ + A + Sbjct: 60 SGNPYCVIPEQLAIQKLFLHQAQLDSVEVDNSQISASMEARLNELIMRAGSKEKLEEYYH 119 Query: 129 IGDNHFKQYLAIQSIWP---DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 ++ + V+ + E+ + M ++ + + Sbjct: 120 KTMTQIREMMFESLKEQYTVQKVRENLTSDIKVTPAEVRRYFKDMPEDSLPWISDQVEVQ 179 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-----IGKAQYLLES 240 I Q +++ + + R+ + A + G+ Y+ Sbjct: 180 IITQQPRIPQEEIERVKAELRDYTDRVNNGESSFSTLAILYSEDPGSARYGGEMDYVGRG 239 Query: 241 DLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 +L P F N+ + ++ G I + DKR + + K+ Sbjct: 240 ELDPAFANVAFSLTDPKKISKVVESEYGFHIIQLVDKRGDKVK------VRHILRKPKLA 293 Query: 299 KH 300 + Sbjct: 294 QA 295 >gi|323498280|ref|ZP_08103282.1| peptidyl-prolyl cis-trans isomerase D [Vibrio sinaloensis DSM 21326] gi|323316708|gb|EGA69717.1| peptidyl-prolyl cis-trans isomerase D [Vibrio sinaloensis DSM 21326] Length = 619 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 36/403 (8%), Positives = 94/403 (23%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY + + I G+ + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYIVGGAGNT-AAKVGNVEIGRGEFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q E G+ V Sbjct: 60 QNERNRMQAQLGDYFSNLLADPSYVESFRKSVLDRMVNDLLIEQHAETLGLRVSDAQVRT 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFK---QYLAIQSIWPDVVKN----------- 150 V+ + D + + +YL + ++ Sbjct: 120 MIVEMPQFQADGKFDQDIYQASLRRAGFTPESFAEYLRRDLVRNQLLTAIQASDFSLAAE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 DF K E +I A ++ R ++ + Sbjct: 180 VEAQAKLLTQTREVETLTLPLSDFAAKVKLSEEDIQAYYEQNPQRYTRPEQVKVAYIELA 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 +L++ + Q + + + Sbjct: 240 AQQLKDAITISEEQAKKYYDEHLDKYSSEEQRRVSHILVEGDDQAKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 E+ + G ++ + P F+ + T + G I + Sbjct: 300 ATLAEEKSDDFGSASEGGSLGWIERDVMDPAFEEAAFGLNNVGEVTELVKSDFGYHIIKL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + + A + + + E +L A Sbjct: 360 DELKASVAKPYTEVAAEIKQELKDQQAIDQFYELQSELEKVAF 402 >gi|188590380|ref|YP_001919599.1| peptidylprolyl isomerase [Clostridium botulinum E3 str. Alaska E43] gi|188500661|gb|ACD53797.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum E3 str. Alaska E43] Length = 343 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 28/350 (8%), Positives = 86/350 (24%), Gaps = 51/350 (14%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 + + + + ++ A+ + + T+ E IT GD+ + + + Sbjct: 1 MNKIKKIVASVVVATLAFSIVGCKMIEKTPEAIKNTVLATVGKEKITQGDLDRDLKSITE 60 Query: 66 QKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 EL+ + ++ E + + + + +N + Sbjct: 61 SLKQKYGENYESNADIKDQLKELKTQYLNAIVNEKVILAKSAELNLRPSDEELNKDVDEA 120 Query: 110 ARNTGLSAEDFSSFLDK--QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + + + Q + V D + + +I Sbjct: 121 VSYYKTAYQTEEQYNTFLEQNGFTEDEFKEYQKNQAIVRYVYQDMVKDVEVNDEDIQKYY 180 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI- 226 + K+ + ++ + + ++ + Sbjct: 181 DENKDTQ------------FSTPGEIDFDKSLQQANEIKSQLDGGADFAEVAKEKSQDPG 228 Query: 227 HDVSIGKAQYLLESD---LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-- 281 + G ++ S + + + P +Q G I + +D G + Sbjct: 229 TKGNGGSLGFIEYSSTKYVKEFMDGFKDLKEGEISQPIKSQFGYHIIKVTGVKDDGADVA 288 Query: 282 ---------------IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +K + Q K E +++ + + Sbjct: 289 HILVADKGEGTVTPLEDVKEDIRGQLLQKKQSDVFNEKIEEWKKEVGVKI 338 >gi|157962498|ref|YP_001502532.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella pealeana ATCC 700345] gi|157847498|gb|ABV87997.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella pealeana ATCC 700345] Length = 621 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 43/402 (10%), Positives = 97/402 (24%), Gaps = 95/402 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ I V++ F + SY + T+NGE I++ + + Sbjct: 1 MLEKIREGSQGVIAKSILILVILSFAFTGVSSYLGSSTEVA-AATVNGEEISNSALEQAY 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +++ ++ L+ E L Q + G+ + Sbjct: 60 QNERSRLEQQLGDMFATLSADDNYMQSVKQSVLERLVAEKLLDQNAAELGLRVSDEQIKA 119 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK------ 155 + + + + + L + G N F+ + I +V + Sbjct: 120 AIMSEPAFQTDGAFDNDRYQAILRQLGYQANSFRDMMRIDMTRRQLVATLVGSEFVLPSE 179 Query: 156 ---------------------------YGNLEMEIPANKQKMKNITVREYLIRTVLFS-- 186 + +I A +R ++ Sbjct: 180 AKYVADLQGQTRDIDYKVIDATPFLADISVTDEQIKAYYDTNLGQFIRPEVVSLNYIELD 239 Query: 187 -----------------IPDNKLQNQGFVQKRIKDAE-------------------ESRL 210 D N +KR+ + Sbjct: 240 AKDLAKDVTVTDAEAQAYYDEHKANYTQAEKRLAAHILVQSGDDDAAAKAKAEAIYKQLQ 299 Query: 211 RLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVE 268 + + G+ + + P+F L ++ + T G Sbjct: 300 DGADFAELAKTESEDTFSGEQGGQLDWFEAGVMEPEFDTALFALNKGEYSGVVKTNFGYH 359 Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 I D G A A + + +K + +L+ Sbjct: 360 IIKALDI--QAGAQAPFADVKEKILAQLKDKQAVDKFYELQQ 399 >gi|39997172|ref|NP_953123.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Geobacter sulfurreducens PCA] gi|39984062|gb|AAR35450.1| PPIC-type PPIASE domain protein [Geobacter sulfurreducens PCA] gi|298506185|gb|ADI84908.1| peptidylprolyl cis-trans isomerase, PpiC-type [Geobacter sulfurreducens KN400] Length = 321 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 40/328 (12%), Positives = 92/328 (28%), Gaps = 34/328 (10%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT--------TINGEVITDGDISKRIALLK 64 +K + + I+ + + S + +NG VI ++ + Sbjct: 1 MKTVRNLIITILCLLGSVPSAPGAETA---VAPSGRAAAAVVNGAVIFRDELDHFVEFAL 57 Query: 65 LQK----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 ++ +E+ + +LI L Q EK + ++ G Sbjct: 58 SRRRGAGRKVTDEQKKRVERQELDKLIAMELLAQAGEK----LNPADLSKKIQARREAIG 113 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 S S + N + + + + E ++ A +K K+ Sbjct: 114 SSVSRGGSVVAPSEDRLNDT---ARRDVLVDAYLASRGIDAIKVPETDLRAYYEKNKSGF 170 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL---EKFASKIHDVSI 231 + I + K + + K E R R+ + + + Sbjct: 171 KKPETIAVRHILVKVEKEASPETQAEARKKIEGIRDRIGAGADFAVLASESSDCASAAKG 230 Query: 232 GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG--EIALKAYL 288 G + + +F + T+ T G I + ++ ++ ++ Sbjct: 231 GDLGEIQRGFMPREFDQVAFSLKPGETSGIVKTHHGFHIIRVMERHPETVRTFEEMRDFI 290 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K E V++L+ A I Sbjct: 291 EQYLAKDYQRKKVEEIVEELKRAATIDI 318 >gi|297564584|ref|YP_003683556.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Meiothermus silvanus DSM 9946] gi|296849033|gb|ADH62048.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Meiothermus silvanus DSM 9946] Length = 632 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 36/324 (11%), Positives = 97/324 (29%), Gaps = 10/324 (3%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-R 59 + +V T + F+ L I+F + + +NG +++ ++++ + Sbjct: 4 INKRVITIIFGFLALAFLVGATILFALQGGGNLSGNRSQGPTVMWVNGRPVSELELARIQ 63 Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKS---GITFDSNTVNYFFVQHARNTGLS 116 L L K + +E + + + I V + G + Sbjct: 64 SRDPLLSSNPQGLMKPLLDTFFLEQVILTKAVQQDSSRIRVSGGEVRKALDDLKQRAGAT 123 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 ++ L Q + + S+ + K E+ K Sbjct: 124 TKEQYDQLLNQIGYTDSQLRDELRDSLKVQKRVEEIQKKATPTPEEVKFYFDLNKANYKT 183 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG-KAQ 235 E ++ + D KL + + ++K + K+ + + + Sbjct: 184 EDRVKARQIVVDDKKLAD--DLYAQLKAGADFVELAKKNSKVAADQGGALGAETGKSEPG 241 Query: 236 YLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQN 292 ++ + + + K Q T P + + + + + +K ++ Sbjct: 242 FVTRVIFPSEVADAVFKLKQGGLTAPIASGGRYYIVKVEEFKPGGDPNFEEVKDRVAEDV 301 Query: 293 TPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ Y+ +LR + + Sbjct: 302 KKIKGDQALEAYLLELRKKTQVRF 325 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 27/308 (8%), Positives = 62/308 (20%), Gaps = 73/308 (23%) Query: 30 IVSYKSWAMSSRIRTTINGEVI----------TDGDISKRIALLKLQKINGELEKIAVQE 79 ++ + + + I T+ I + I A+++ Sbjct: 325 FAENTTYKYENPVVAKVGESEIKLPELTQLVFTNQQIPQLIQQGLGDLAVQFFMPQALEQ 384 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 LI + E +K Sbjct: 385 LITREILVSEAKKIN--------------------------------------QPFVGAR 406 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 Q V+ + E+ + + + Sbjct: 407 DQIARE--VQAYHTKDITVTDEEVRKYYAENPASFTIPASAEV----KGISFKKEDEAKA 460 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ--------NLLK 251 K ++A +L + ++ + L P N K Sbjct: 461 KAFREAALKGGKLEDLAKA--------NGGTVTDYGKVNPGTLPPVANRLVFLTKGNFPK 512 Query: 252 KSQNNTTNPYVTQKG-VEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + G + + + ++ L + Q K K +V +L Sbjct: 513 GPLGEVSEVVKLDDGSYQVLIVNNRVAEKLKPFEEVADQAREQVLAQKRSKAAQAWVAEL 572 Query: 309 RSNAIIHY 316 R + Sbjct: 573 RKQTKVEN 580 >gi|149201836|ref|ZP_01878810.1| PPIC-type PPIASE domain [Roseovarius sp. TM1035] gi|149144884|gb|EDM32913.1| PPIC-type PPIASE domain [Roseovarius sp. TM1035] Length = 414 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 33/279 (11%), Positives = 100/279 (35%), Gaps = 7/279 (2%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIR---TTINGEVITDGDISKRIALLKL 65 ++ + L L + ++ A + + +N + IT ++ +R LL L Sbjct: 1 MTPIFRRLIAALTLAVTGLLVWPLSGGMAQAQNLFSPQIYVNDQAITGYELQQRARLLTL 60 Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 + G+ +++A ++LI E +K SG+ + + V + A ++A+ + L Sbjct: 61 FRAPGDPQRLAREQLIEERIKIDAARASGLVLEEDLVRDGMEEFAGRANMTADQLIAALG 120 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 G+ F++++ W ++ + F + E ++ + + L+ ++ Sbjct: 121 DSGVSQESFREFVRAGITWRELTRARFAARVSVSEDDLERATRALTGGAAVRVLLSEII- 179 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 ++ + + + ++ G+ ++ S+L Sbjct: 180 --LPVTSLEDAEAKQALAASIAESTSEGAFAEAARRHSAAPSSSRGGRMDWVALSELPAG 237 Query: 246 FQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 + ++ + ++P + + + D ++ Sbjct: 238 LRPIVLGLAPGEVSDPLPLEGALALFYMRDIEEMTVPSP 276 Score = 40.8 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 4/84 (4%) Query: 235 QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKG--VEYIAICDKRDL-GGEIALKAYLSA 290 ++ L T+ G + ++ +C + GE LS Sbjct: 328 GSKAPEEIPQDIAIALASLDPGETSTSVTRANGQTLVFLMLCGRSPKLDGEAPSVEDLSN 387 Query: 291 QNTPTKIEKHEAEYVKKLRSNAII 314 +IE Y+++LR+ A I Sbjct: 388 FIRNQRIESFANGYLEQLRAEARI 411 >gi|146282422|ref|YP_001172575.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas stutzeri A1501] gi|145570627|gb|ABP79733.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas stutzeri A1501] Length = 618 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 42/402 (10%), Positives = 108/402 (26%), Gaps = 89/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++++ + + + A +++ +NGE I+ D+ + + Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIVVLLALTGFDAIFNAASNAQNAAEVNGEEISRYDLDQAM 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q L A+ LI L Q + + F ++ Sbjct: 61 NMQRRQLAQQLGQDFDPSLLDDRLLRDAALGSLIDRMLLLQAAKGANFAFSREALDQLIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND------------- 151 + + + F + + G F+Q L + + + Sbjct: 121 QTPEFQVDGAFNPARFDQVIQQMGYSRLQFRQLLEQEMLIGQLRAGISGTGFVTDQQVQN 180 Query: 152 ------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRT----------- 182 + +I + + + Sbjct: 181 FARLEMQTRDFATLTVPAQHEAIEVSDEQINEFYEANADRFRTPEQVVVEYVELKKESFF 240 Query: 183 --------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--- 231 L + ++ N ++ E+ L D K + + Sbjct: 241 DQVEASDEELQELYQKQIANLAEQRRAAHILIETGGELSDDEAKAKIDEIAARVKNGEDF 300 Query: 232 -----------------GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC 273 G + P F++ L ++ + P ++ G I + Sbjct: 301 ATVAKEVSQDPGSANEGGDLGFAGPGVYDPAFEDALYALNEGEVSAPVKSEFGWHIIKLL 360 Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ ++K L + ++E+ E K+L A Sbjct: 361 GVQSPEVPSFESMKPELVRELKAQQVEQRFVETSKQLEDAAF 402 >gi|332701510|ref|ZP_08421598.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio africanus str. Walvis Bay] gi|332551659|gb|EGJ48703.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio africanus str. Walvis Bay] Length = 631 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 26/212 (12%), Positives = 57/212 (26%), Gaps = 9/212 (4%) Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 S E+ + + ++ Q ++ E+ Sbjct: 196 LEDFTAQASPSEEEIAGYYEQNKARFTLPAQARISYLLFSA---EQMARPEQVPAEEVRQ 252 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP---KDCNKLEKF 222 + + R+ +R + K Q V E+ R ++ + +KF Sbjct: 253 YYEAHADKFQRQEEVRASHILVKVAKDAPQEEVDTAKAKIEDIRKKITGSLSFADAAKKF 312 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + + G + + P F+ + P T+ G I + ++R+ G Sbjct: 313 SEGPSGPAGGDLGWFGRGRMVPTFEQAAFALKPGQVSAPVRTEFGWHIIKLEERREPG-- 370 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 A + + A V A Sbjct: 371 QIPLAEVESDIRAELARDTAASLVGDALDEAT 402 Score = 39.7 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 2/56 (3%) Query: 263 TQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + KG + + K A T ++ ++ +++ LRS A I Sbjct: 569 SPKGWYVAKLDALIPAPESEWQSQKDMWVAALTQSREQELYQAFIESLRSEAKIEI 624 >gi|254444073|ref|ZP_05057549.1| PPIC-type PPIASE domain protein [Verrucomicrobiae bacterium DG1235] gi|198258381|gb|EDY82689.1| PPIC-type PPIASE domain protein [Verrucomicrobiae bacterium DG1235] Length = 326 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 34/325 (10%), Positives = 100/325 (30%), Gaps = 22/325 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAM-----SSRIRTTINGEVITDGDISKRIALLKLQKI- 68 ++ +LI I +S+ A ++ I ++IT ++ + + Q Sbjct: 1 MIKKATLLISLFIPLALSFAQSAPKGARLANSIAAIAEEKIITVEEVRRELQPFLPQIQA 60 Query: 69 ------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA-RNTGL 115 E+E +Q L L ++ + ++ V+ + Sbjct: 61 DSKGDPMKFRQLIEEMETDIIQNLTDNVLIVKQFYEDKGQIPASFVDNEIEETIITKFEG 120 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + +L G + + + + I + + I + K Sbjct: 121 KRSLYLDYLKSIGKTPDEHRMMIKEEIIVNYMRSKMRKSASVVSPVRIEKFYDEYKQEFF 180 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 +E I L + ++ +++ + E K+++ G Sbjct: 181 QEEAIHLRLIRLTKLADESDDVLKQTADEIYEKLELGFAFDELASKYSNDAKAKKGGDWG 240 Query: 236 YLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQN 292 ++ + L + ++ + + P + + + + R G ++ + Sbjct: 241 WVTKGSLIEELSTPAFAMTEGDYSEPITIKNNLFILYCEEHRPEGYMPLPDVREDIEDIL 300 Query: 293 TPTKIEKHEAEYVKKLRSNAIIHYY 317 + EA+++++LR + + + Sbjct: 301 ISQMAREAEAKFLERLRRDGYVRRF 325 >gi|86148518|ref|ZP_01066806.1| peptidyl-prolyl cis-trans isomerse D [Vibrio sp. MED222] gi|85833709|gb|EAQ51879.1| peptidyl-prolyl cis-trans isomerse D [Vibrio sp. MED222] Length = 621 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 38/403 (9%), Positives = 99/403 (24%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY + + I G+ + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYI-TGGGNNAAAKVGNTEIARGEFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + K + +I + L +Q+ E G+ + + Sbjct: 60 QNERNRMQSQLGDYFAQMLADPTYVESFRKSVLDRMINDVLLEQQAESLGLRISDSQIRT 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 ++ + E + S L + G F +Y+ + +V Sbjct: 120 MILEMPQFQTAGQFDQEVYQSALRRAGFSAESFAEYMRRDLMRNQLVTALQGSEFVLQGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 D + +I Q+ R + + Sbjct: 180 IDIQSKLIAQTRDIRTVTLSVADLAKNIELTDEQIELYYQENPAAYTRPEQAKVSYIELS 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 L++Q V + + + + Sbjct: 240 AEALKSQLEVSDEEAQKYYQEHLDKYSTEEQRKVSHILVQGDDEAKAQSILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 E+ + G ++ + P F++ + +TT + G I + Sbjct: 300 ATLAEEKSDDFGSADVGGDLGWIERDVMDPAFEDAAFALVNIGDTTGLVKSDFGYHIIKL 359 Query: 273 CDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + + A + + E +L A Sbjct: 360 DELKASQAQPYTEVAAEIKTELLDQHAVDQFYEQQTELEKVAF 402 >gi|187932868|ref|YP_001884407.1| peptidylprolyl isomerase [Clostridium botulinum B str. Eklund 17B] gi|187721021|gb|ACD22242.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum B str. Eklund 17B] Length = 343 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 26/350 (7%), Positives = 85/350 (24%), Gaps = 51/350 (14%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 + + + + ++ ++ + + T+ E IT GD+ + + + Sbjct: 1 MNKIKKIVASVVVATLAFSIVGCKMIEKTPESIKNTVLATVGKEKITQGDLDRDLKSITE 60 Query: 66 QKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 EL+ + ++ E + + + + +N + Sbjct: 61 SLKQKYGENYESNADIKDQLKELKTQYLNAIVNEKVILAKSTELNLRPSDEELNKEVDEA 120 Query: 110 ARNTGLSAEDFSSFLDK--QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + + + Q + V D + + +I Sbjct: 121 VNYYKTAYQTEEQYNAFLEQNGFTEDEFKEYQKNQAVVRYVYQDMVKDVEVNDDDIQKYY 180 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI- 226 + K + ++ + + ++ + Sbjct: 181 DENKETQ------------FSTPGEIDFDKSLQQANEIKSQLDGGADFSEVAKEKSQDPG 228 Query: 227 HDVSIGKAQYLLESD---LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD------ 277 + G ++ S + + + P +Q G I + +D Sbjct: 229 TKDNGGSLGFIEYSSTKYVKEFMDGFKDLKEGEISQPIKSQFGYHIIKVTGVKDDGAEVA 288 Query: 278 -----------LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +K + Q K E +++ + + + Sbjct: 289 HILVADKGEGTVTPLEDVKEDIRGQLLQKKQSDVFNEKIEEWKKDVGVKI 338 >gi|189502175|ref|YP_001957892.1| hypothetical protein Aasi_0785 [Candidatus Amoebophilus asiaticus 5a2] gi|189497616|gb|ACE06163.1| hypothetical protein Aasi_0785 [Candidatus Amoebophilus asiaticus 5a2] Length = 445 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 26/312 (8%), Positives = 97/312 (31%), Gaps = 14/312 (4%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 ++ K+L + + + ++ +++ + I ++ L + Q Sbjct: 1 MNTASKILWIAIGVFFTQHTLMAQTPQGRLLDKVIASVDDQPILQSELDAEYQLYQAQDN 60 Query: 69 --NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---NTGLSAEDFSSF 123 + ++ +++ + K I + V+ + + + + Sbjct: 61 ASKKPTKCQVLENMVINKILLANAAKKEINVKNGEVDRYLKYRMQAILEEVGTEARLEQY 120 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL---I 180 + K + + + + +++ + +E+ + ++ V + Sbjct: 121 IRKPIHVFKEELRKSIREQLTIEKMRDSIIGNITISPIEVQSYFDQLPASDVPFFPATVE 180 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 L P + Q + V + + + +++ I + G+ + Sbjct: 181 AYQLVLFPSIEEQEKKLVIENLASLKTRIQAGESFAVLARQYSEDIGSASNGGELGFWRI 240 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 +L ++ + + P T+ G I + +K+ + ++ + K+ Sbjct: 241 GELDSSYEKAALALNPGEISEPVETRFGFHIIQLIEKQK---DKYNTRHILLKPLAAKVS 297 Query: 299 -KHEAEYVKKLR 309 + E + +R Sbjct: 298 IEEAIERINNIR 309 Score = 38.5 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 34/290 (11%), Positives = 76/290 (26%), Gaps = 24/290 (8%) Query: 45 TINGEVITDGDISKRIALLKLQKING-----ELEKIAVQELIVETLKKQEIEKSGITFDS 99 I I+ ++ L + E ++ + I E KK IE Sbjct: 149 IIGNITISPIEVQSYFDQLPASDVPFFPATVEAYQLVLFPSIEEQEKKLVIENLASLKTR 208 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 F AR S+ + ++ + + Sbjct: 209 IQAGESFAVLARQYSEDIGSASNGGELGFWRIGELDSSYEKAALAL-----NPGEISEPV 263 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 E + ++ +Y R +L K+ + +++ + Sbjct: 264 ETRFGFHIIQLIEKQKDKYNTRHILLKPLAAKVSIEEAIERINNIRTSILEKQVTFEKAA 323 Query: 220 EKFASK-IHDVSIGKAQYLLES-DLH------PQFQNLLKKSQNNTTNPYV-TQKGVE-- 268 ++ G E + F L K + + + P V T G + Sbjct: 324 MSYSQDIATAHQGGLLTGNSEGVQMPVDKLPSDVFFILDKMAPGDVSRPIVFTIDGKQAA 383 Query: 269 -YIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + ++ + K ++ E+++ ++ AII Sbjct: 384 CIIYLKERIASHQANFGQDYEKIHKLALAYKKQRILNEWIEAAKAKAIIQ 433 >gi|33602778|ref|NP_890338.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella bronchiseptica RB50] gi|81713941|sp|Q7WCX5|PLP1_BORBR RecName: Full=Probable parvulin-type peptidyl-prolyl cis-trans isomerase; Short=PPIase; AltName: Full=Rotamase; Flags: Precursor gi|33577220|emb|CAE35777.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella bronchiseptica RB50] Length = 258 Score = 93.6 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 99/305 (32%), Gaps = 52/305 (17%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELE 73 + +L C++ + ++ T+NG+ IT + + + L+ Q + +L Sbjct: 1 MKRIAMLAAACVIAVPAFAQN------VATVNGKPITQKSLDEFVKLVVSQGATDSPQLR 54 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + QE+I + Q EK G+ ++ Sbjct: 55 EQIKQEMINRQVFVQAAEKDGVAKQADVQTEI---------------------------- 86 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 LA Q I + D++ K+ + ++ A +K+K + + + D K Sbjct: 87 ---ELARQGILVRALMADYLQKHPVTDAQVKAEYEKIKKEQAGKMEYKVRHILVEDEKTA 143 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 N Q + K + +K + G + ++ F + K Sbjct: 144 NDLLAQVKSNK--------SKFDDLAKKNSKDPGSAERGGDLGWAPATNYVQPFAEAVTK 195 Query: 253 SQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + P TQ G I + D R + E + Q ++ A Y K+LR Sbjct: 196 LKKGQLVDKPVQTQFGWHVIQVDDTRPV--EFPAMDQVRPQLEEMLRQQTLANYQKQLRE 253 Query: 311 NAIIH 315 A I Sbjct: 254 QAKIQ 258 >gi|295702743|ref|YP_003595818.1| foldase protein PrsA [Bacillus megaterium DSM 319] gi|294800402|gb|ADF37468.1| foldase protein PrsA [Bacillus megaterium DSM 319] Length = 307 Score = 93.6 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 34/308 (11%), Positives = 89/308 (28%), Gaps = 33/308 (10%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 + L T ++ + + SS++ IT GD+ K++ Q Sbjct: 3 KSLVALTTAASLVALSACSGGNDASNANDSSKVIVETKAGNITQGDLYKQMKDTIGQDQF 62 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 L + +E ++ ++ G + Sbjct: 63 NTLVRSVTEEKVLSK---------KYKVTDKELDQQLNILREQYGDQVDSV--------- 104 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 ++ + + + + E+ + K + ++ Sbjct: 105 IKQKGEKEVKDMLKVDILREKAATAGIKVSDKELKKAYDEYKAQKPQIRASHILV----- 159 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN 248 +K + E + + +++++ + G Y E + +F+ Sbjct: 160 -------KDEKTANEVEAKIKKGEDFASLAKEYSTDQQSAANGGDLGYFGEGQMVKEFEE 212 Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH-EAEYVK 306 K + + P T+ G I + DK+ + K L Q +K+++ + ++ Sbjct: 213 AAYKLKKGEVSKPIKTEYGYHIIKLVDKKKVESFEKKKPELEQQIKRSKVDQAEANKKIQ 272 Query: 307 KLRSNAII 314 K A + Sbjct: 273 KELDKAKV 280 >gi|120610416|ref|YP_970094.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli AAC00-1] gi|120588880|gb|ABM32320.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli AAC00-1] Length = 642 Score = 93.6 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 36/406 (8%), Positives = 99/406 (24%), Gaps = 102/406 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58 M + + ++ ++ F +V I + S + ++G IT D Sbjct: 1 MFESIRKHSKVVM-IVLFLLIIPSFVLVGID-RNYFTSKSAVVARVDGHDITQDDWDNAH 58 Query: 59 RIALLKLQKINGEL----------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 R+ +++ + + ++ L+ + + + K + + Sbjct: 59 RMETDRIRAQSPSVDARLLDSPRARYATLERLVRDRVMQAAAVKMHLVTSDAQLARTLQG 118 Query: 109 HAR-------NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + L AE + + + QG+ F+ + + V+ Sbjct: 119 IPAIAALKRPDGSLDAEAYRALVGSQGLTPEGFESNVRRELSLSQVMGGVLGSAFAGQEP 178 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYL--------- 179 DF K + E+ + + + + Sbjct: 179 ARLALDALYQRREIQVARFDAKDFAAKVAPTDDELQSYYKAHEAQFRQPEHADVQYVVLD 238 Query: 180 -------------IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + +L + + + D K A + Sbjct: 239 LDAVRASITLSEDDLRSYYKENLERLAGKEERRASHILINAPKDAPAADREKARARAQAL 298 Query: 227 -----------------------HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYV 262 S G + D+ F++ + + ++ Sbjct: 299 LEQVRKAPGTFAEVARKNSQDTGSAPSGGDLGFFKRGDMVKPFEDAAFSMKKGDISDLVE 358 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++ G I + D + + A+ ++ +L Sbjct: 359 SEYGYHIIQLNDVK--TPRQPTFEEVRAKLETEAKQQQAQRKFAEL 402 >gi|330829914|ref|YP_004392866.1| peptidylprolyl cis-trans isomerase D [Aeromonas veronii B565] gi|328805050|gb|AEB50249.1| Peptidylprolyl cis-trans isomerase D [Aeromonas veronii B565] Length = 637 Score = 93.6 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 33/408 (8%), Positives = 98/408 (24%), Gaps = 96/408 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + + +++ F + + SY + + T+NG I+ + Sbjct: 2 MLDKLREGAQGKVAKVILGLIILSFALAGVGSYLN-GPARTAPATVNGTEISAAALENAY 60 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + + + LI + L + + G+ + Sbjct: 61 RNERARMESQMGEAFSQLAANPDYMKQFRRGVLDRLIDQALLDSKARELGLRISDEQIKQ 120 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + A N + + + + + G+ F+ L + ++ Sbjct: 121 AIVAMPEFAENGKFNNDRYLQLIRRAGMTPEMFRDSLRQDMVRQQLMSALLGTEFSLKGE 180 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNIT-------------- 174 ++M + E+ + Sbjct: 181 AEQLDKLYNQTRDLRLVRLAAANYMADVQVSDNELEQYYKTNGARFMNDEQVKVDYLLLD 240 Query: 175 ---------------VREYLIRTVLFSIPDNKLQNQGFV------QKRIKDAEESRLRLP 213 Y LF + + + + + AE + Sbjct: 241 AANLAKDIKVTEQDAQDYYDQHQDLFQRAERRHVAHILIPFGKDEKAAEQKAEAVLAKAK 300 Query: 214 KDCNKL----EKFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGV 267 + + G+ + + + P F+ + + + G Sbjct: 301 AGDDFAALAKADSSDTFSAKKGGELDWFEKGVMDPAFEKAAFALNKAGDLSTVVKSPFGF 360 Query: 268 EYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 I + +K + K ++ +K+ ++ Sbjct: 361 HIIKLLGVEAAQTKPFADVKEETITRLQADKAKEKFFAEQQKMADSSF 408 Score = 37.7 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 1/82 (1%) Query: 237 LLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPT 295 L ++ + F + G + DK ++ + + A L AQ Sbjct: 548 LDQNLIAQAFTLPHPIDGKPSVALVAETNGDRVVVALDKVNVPAAASGMAAMLQAQLGQG 607 Query: 296 KIEKHEAEYVKKLRSNAIIHYY 317 K + + +LR A I Y+ Sbjct: 608 KAQVDYKSLIDELRKAAKIEYF 629 >gi|324114668|gb|EGC08636.1| ppic-type ppiase domain-containing protein [Escherichia fergusonii B253] Length = 622 Score = 93.6 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 37/395 (9%), Positives = 103/395 (26%), Gaps = 85/395 (21%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + T+ + + + +++ F + + Y ++ +NG+ I+ G Sbjct: 1 MDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNGQEISRGQFENAFN 59 Query: 62 LLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 + + L + + LI E L Q + V Sbjct: 60 SERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYSRDLKLGISDEQVKQA 119 Query: 106 FVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV-------------- 148 +++ L++ G+ + + Q L Q ++ Sbjct: 120 IFATPAFQVDGKFDNSRYNAILNQMGMSADQYAQALRNQLTTQQLINGIAGTDFMLKGET 179 Query: 149 --------KNDFMLKYGN-----------LEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + + + + EI + + KN V R + Sbjct: 180 DELAALVSQQRVVREATIDVNAKAEKQQVSDAEITSYYDQHKNNFVTPEQFRVSYIMLDA 239 Query: 190 NKLQNQGFVQKRIKDAEESRLRL-----------------------------PKDCNKLE 220 +Q ++ + + + Sbjct: 240 ANIQQPVSDADIQAYYDQHQDQFTQPQRVRYSIIQTKTENEAKAVLDALNNGGDFAELAK 299 Query: 221 KFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + ++ I + G +L +S + ++ K + + + G + + D + Sbjct: 300 EKSADIISARNGGDLGWLEDSTTPQELKDAGLKDKGQLSGVIKSSVGFLVVRLDDVQPAK 359 Query: 280 GEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 VKTLAEVRDDIAAKVKHEKALDAYYALQQKVSDAA 394 >gi|78185901|ref|YP_373944.1| peptidyl-prolyl cis-trans isomerase SurA [Chlorobium luteolum DSM 273] gi|78165803|gb|ABB22901.1| peptidyl-prolyl cis-trans isomerase SurA [Chlorobium luteolum DSM 273] Length = 439 Score = 93.6 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 97/310 (31%), Gaps = 14/310 (4%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI----N 69 K L + F +I ++ + + ++ ++ + EVI ++ R + ++Q Sbjct: 3 KALHSVFAVIAVLLIMPPTLSAAVVADKVVAVVGSEVIFKSELDSRELMTRMQYPGLKDE 62 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 L + +I + + + + ++ D N V V R + G Sbjct: 63 ASLRSTILDNIIDQKIILTKAKIDSVSIDENAVTSMAVDRFRQLSGRFTSKEDMERRLGR 122 Query: 130 GDNHFKQYLAIQSIWPDVVK---NDFMLKYGNLEMEIPANKQKM---KNITVREYLIRTV 183 + ++ LA + +++ E+ + + E + + Sbjct: 123 SVDAIRRDLADELRGQQMIETLKRKKFSSVTIGYGEVMSFYRSNQASMPNLPEEVSVSQI 182 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 L N ++K + ++ +++ G ++ +L Sbjct: 183 LKFPGVNSASKAEALKKIQEIQKKQGSGFLSFEELARRYSMDPGSAPLGGDLGFVQRGEL 242 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 F++ + + T+ G I + G I ++ L A + Sbjct: 243 VKPFEDAAYALKDGHVSGIVETRYGYHIIQRLGRE--GSSIHVRHILVAFERSGSDDGEA 300 Query: 302 AEYVKKLRSN 311 A ++ +RS Sbjct: 301 AAFLDAIRSK 310 >gi|166030348|ref|ZP_02233177.1| hypothetical protein DORFOR_00009 [Dorea formicigenerans ATCC 27755] gi|166029868|gb|EDR48625.1| hypothetical protein DORFOR_00009 [Dorea formicigenerans ATCC 27755] Length = 260 Score = 93.6 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 28/277 (10%), Positives = 67/277 (24%), Gaps = 38/277 (13%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 ++ + G ITD ++ I L ++ + + K G Sbjct: 17 QKVLAVVGGHEITDKEVDAFIKSLPREQQAYASNPQFRAQCQEQLEALYSFAKYGEDLKL 76 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + + + Sbjct: 77 DETEEYKSVMENARKDILA---------------------------RLAMKQLFDSVKVT 109 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + E+ + K+ + + + NQ E + Sbjct: 110 DEEVKDYYEANKSQFKKGATVHAKHILTDSEEKCNQIL--------ESIVSGEKVFEDAA 161 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 ++F++ G + + +F++ + P TQ G I + +K+D Sbjct: 162 KEFSTCPSGQRGGDLGEFGKGQMVKEFEDAAFAAEIGHVVGPVKTQFGYHLIKVEEKKDA 221 Query: 279 --GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +K + +Q K ++ V +L Sbjct: 222 AESSFDEVKEQIKSQLKQQKQGDAYSKKVAELTEKYK 258 >gi|251778310|ref|ZP_04821230.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082625|gb|EES48515.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 343 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 27/350 (7%), Positives = 85/350 (24%), Gaps = 51/350 (14%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 + + + + ++ A+ + + T+ E IT GD+ + + + Sbjct: 1 MNKIKKIVASVVVATLAFSIVGCKMIEKTPEAIKNTVLATVGKEKITQGDLDRDLKSITE 60 Query: 66 QKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 EL+ + ++ E + + + + +N + Sbjct: 61 SLKQKYGENYESNADIKDQLKELKTQYLNAIVNEKVILAKSAELNLRPSDEELNKDVDEA 120 Query: 110 ARNTGLSAEDFSSFLDK--QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + + + Q + V D + + +I Sbjct: 121 VSYYKTAYQTEEQYNTFLEQNGFTEDEFKEYQKNQAIVRYVYQDMVKDVEVNDEDIQKYY 180 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI- 226 + K+ + ++ + + ++ + Sbjct: 181 DENKDTQ------------FSTPGEIDFDKSLQQANEIKSQLDGGADFAEVAKEKSQDPG 228 Query: 227 HDVSIGKAQYLLESD---LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-- 281 + G ++ S + + + P +Q G I + +D G + Sbjct: 229 TKGNGGSLGFIEYSSTKYVKEFMDGFKDLKEGEISQPIKSQFGYHIIKVTGVKDEGADVA 288 Query: 282 ---------------IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +K + Q K +++ + + Sbjct: 289 HILVADKGEGTVTPLEDVKEDIRGQLLQKKQSDVFNGKIEEWKKEVGVKI 338 >gi|218710170|ref|YP_002417791.1| peptidyl-prolyl cis-trans isomerase D [Vibrio splendidus LGP32] gi|218323189|emb|CAV19366.1| Peptidyl-prolyl cis-trans isomerase D [Vibrio splendidus LGP32] Length = 621 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 37/403 (9%), Positives = 98/403 (24%), Gaps = 91/403 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY + + I G+ + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYI-TGGGNNAAAKVGNTEIARGEFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + K + +I + L +Q+ E G+ + + Sbjct: 60 QNERNRMQSQLGDYFAQMLADPAYVESFRKSVLDRMINDVLLEQQAESLGLRISDSQIRT 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 ++ + E + S L + G F +Y+ + +V Sbjct: 120 MILEMPQFQTAGQFDQEVYQSALRRAGFSAESFAEYMRRDLMRNQLVTALQGSEFVLQGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 D + +I Q+ R + + Sbjct: 180 IDIQSKLIAQTRDIRTVTLSVADLAKTIELTDEQIEQYYQENPAAYTRPEQAKVSYIELS 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 L++Q V + + + + Sbjct: 240 AEALKSQLEVSDEEAQKYYQEHLDKYSTEEQRKVSHILVQGDDEAKAQSILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 E+ + G ++ + P F+ ++ +TT + G I + Sbjct: 300 ATLAEEKSDDFGSADVGGDLGWIERDVMDPAFEEAAFALENIGDTTGLVKSDFGYHIIKL 359 Query: 273 CDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + + + + E +L A Sbjct: 360 DEVKASQAQPYTEVATDIKQELLDQHAVDQFYEQQTELEKVAF 402 >gi|167766953|ref|ZP_02439006.1| hypothetical protein CLOSS21_01470 [Clostridium sp. SS2/1] gi|167710928|gb|EDS21507.1| hypothetical protein CLOSS21_01470 [Clostridium sp. SS2/1] Length = 247 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 29/276 (10%), Positives = 68/276 (24%), Gaps = 38/276 (13%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98 + I + GE IT D+ IA L ++ + + + + + K G Sbjct: 3 NQNILAVVAGEEITQKDLDALIAALPKEQQAYAGNEHFRNQCLEQIITVHLFAKLGEELK 62 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 F A + + + Sbjct: 63 LEETEAFADNLAH-------------------------AKREILAQMALGEAMKDITVSE 97 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 E + + + + + +L K + E+ + Sbjct: 98 EEAKEYYKANENQFMAGETVHAKHILV----------DDEDKCQEILEKIIGEETTFEDA 147 Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR- 276 ++F++ G + +F++ + P TQ G I + DK+ Sbjct: 148 AKEFSTCPSKEKGGDLGAFGRGQMVKEFEDAAFAAEVGHVVGPVKTQFGYHLIKVEDKKD 207 Query: 277 -DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + + K + +L+ Sbjct: 208 AETSVYEDVADTIKNIILQQKRNDVYGNKIAELKEK 243 >gi|33594430|ref|NP_882074.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella pertussis Tohama I] gi|33597875|ref|NP_885518.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella parapertussis 12822] gi|81713668|sp|Q7W5E0|PLP1_BORPA RecName: Full=Probable parvulin-type peptidyl-prolyl cis-trans isomerase; Short=PPIase; AltName: Full=Rotamase; Flags: Precursor gi|167016622|sp|P40415|PLP1_BORPE RecName: Full=Probable parvulin-type peptidyl-prolyl cis-trans isomerase; Short=PPIase; AltName: Full=Protein p13; AltName: Full=Rotamase; Flags: Precursor gi|33564505|emb|CAE43820.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella pertussis Tohama I] gi|33574304|emb|CAE38637.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella parapertussis] gi|332383841|gb|AEE68688.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella pertussis CS] Length = 258 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 99/305 (32%), Gaps = 52/305 (17%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELE 73 + +L C++ + ++ T+NG+ IT + + + L+ Q + +L Sbjct: 1 MKRIAMLAAACVIAVPAFAQN------VATVNGKPITQKSLDEFVKLVVSQGATDSPQLR 54 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + QE+I + Q EK G+ ++ Sbjct: 55 EQIKQEMINRQVFVQAAEKDGVAKQADVQTEI---------------------------- 86 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 LA Q I + D++ K+ + ++ A +K+K + + + D K Sbjct: 87 ---ELARQGILVRALMADYLQKHPVTDAQVKAEYEKIKKEQAGKMEYKVRHILVEDEKTA 143 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 N Q + K + +K + G + ++ F + K Sbjct: 144 NDLLAQVKSNK--------NKFDDLAKKNSKDPGSAERGGDLGWAPATNYVQPFAEAVTK 195 Query: 253 SQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + P TQ G I + D R + E + Q ++ A Y K+LR Sbjct: 196 LKKGQLVDKPVQTQFGWHVIQVDDTRPV--EFPAMDQVRPQLEEMLRQQTLANYQKQLRE 253 Query: 311 NAIIH 315 A I Sbjct: 254 QAKIQ 258 >gi|42521668|ref|NP_967048.1| hypothetical protein Bd0019 [Bdellovibrio bacteriovorus HD100] gi|39574198|emb|CAE77702.1| ppiD [Bdellovibrio bacteriovorus HD100] Length = 269 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 95/296 (32%), Gaps = 38/296 (12%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 L+I ++ I + S+ + + + IT D +K+ +K Q IN ++ +++L+ Sbjct: 3 LVISILLLISATAFAQKSTDVVAQVGKKTITLEDFNKKYNEVKSQTINPPTKEQFLEDLV 62 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + QE EK + D Q Q Sbjct: 63 RYEMGVQEAEKRNLQKDP----------------------------------IVQDRFNQ 88 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 ++ +++ D + +++ K + F Q ++ Sbjct: 89 EMYKALLEKDIGQRVQKIQVSDAEMKAWYAKNPELRTSHILIEFKAGATPAQVAEAKKRA 148 Query: 202 IKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQ-FQNLLKKSQNNTTN 259 + EE + ++ ++ G + L P ++ ++ T Sbjct: 149 TEIYEEVKKSKRPFEELVKLYSDDALSKQVGGDIGWQSRVTLVPNYYEAVVNMKVGEITG 208 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 TQ G I + +R E A K + A K ++ +Y ++++ + I Sbjct: 209 LIETQFGFHVIKLTGRR--SFENANKRQIRAAVFDEKRKQVFNDYFERMKKSYPIK 262 >gi|327484462|gb|AEA78869.1| Peptidyl-prolyl cis-trans isomerase ppiD [Vibrio cholerae LMA3894-4] Length = 616 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 32/403 (7%), Positives = 90/403 (22%), Gaps = 94/403 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y ++ I+ GD + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYLISGGNNAAA----NAEISRGDFEQAY 56 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q G+ V Sbjct: 57 QNERNRMQAQLGDYFSNLLADPAYVASFRKSVLDRMVNDLLLEQHAASLGLRVSDEQVRQ 116 Query: 105 ---FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 Q + + + L + G + +YL + ++ Sbjct: 117 LILEIPQFQSQGVFDSAAYQATLRRAGFTPEMYAEYLRKDLVRNQLMSALQGSEFSLAGE 176 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 DF K + EI + R ++ Sbjct: 177 VNLQDQLISQTRDIRTITLSLEDFAKKVTLSDEEIDQYYKTNTERFTRPEQVKVSYVELS 236 Query: 185 ---------------FSIPDNKLQNQGFVQKRIKDAE--------------ESRLRLPKD 215 L ++R + Sbjct: 237 ADGLKAQVSVDDAAAQQYYQEHLDKYSTAEQRNVSHILIEGNDEQKAQAILDELNAGADF 296 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + + G ++ + P F+ + + + G I + Sbjct: 297 ATLAKEKSQDLGSAAEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRL 356 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 D + + ++ + + + +L A Sbjct: 357 DDIKAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMAF 399 >gi|117618139|ref|YP_856546.1| peptidylprolyl cis-trans isomerase D [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559546|gb|ABK36494.1| peptidylprolyl cis-trans isomerase D [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 636 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 29/408 (7%), Positives = 103/408 (25%), Gaps = 96/408 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + + +++ F + + SY + + T+NG I+ + Sbjct: 1 MLDKLREGAQGKVAKVILGLIILSFALAGVGSYLN-GPARTAPATVNGNDISSAALENAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + + + LI + L + + G+ + Sbjct: 60 RNERARMESQMGESFSQLAANPDYMKQFRRGVLDRLIDQALFDSKARELGLRVSDEQIKQ 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + A + + + + + + G+ F+ L + ++ Sbjct: 120 AIVAMPEFAEDGKFNNDRYLQLIRRAGMTPEMFRDSLRQDMVRQQLMGALLGTEFALKGE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRT------ 182 ++ + E+ + + + + ++ Sbjct: 180 AEQLDKLYNQTRDLRLVRLAASAYLGDVKVSDEEVEQYYKANSSHFMNDEQVKVDYLLLD 239 Query: 183 --------------------------------VLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + I +++ +++ + Sbjct: 240 AATLGKDVKVSEQDAQDYYDQHQDLFQRAERRHVAHILIPFGKDEKAAEQKAEAVLTKAK 299 Query: 211 RLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGV 267 + +S G+ + + + P F+ + + + G Sbjct: 300 AGDDFAALAKADSSDTFSAKKGGELDWFEKGVMDPAFEKAAFALAKAGDLSTVVKSPFGF 359 Query: 268 EYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 I + +KA ++ K ++ +K+ ++ Sbjct: 360 HVIKLLGVEPAQTKPFADVKAETISRLQADKAKELFFAEQQKMADSSF 407 Score = 40.0 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 1/82 (1%) Query: 237 LLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPT 295 L ++ + F+ + G + DK + E + A L Q Sbjct: 547 LDQNLVAQAFRMPHPIDGKPSVELVTEANGDRVVVALDKVTVAKEPSGMAKLLQGQLGQG 606 Query: 296 KIEKHEAEYVKKLRSNAIIHYY 317 K + + +LR +A I Y+ Sbjct: 607 KAQVSYKSLIDELRKSAKIEYF 628 >gi|260776378|ref|ZP_05885273.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio coralliilyticus ATCC BAA-450] gi|260607601|gb|EEX33866.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio coralliilyticus ATCC BAA-450] Length = 619 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 39/406 (9%), Positives = 96/406 (23%), Gaps = 92/406 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY ++ + I G+ + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYIVGGSNNS-AAKVGNVEIGRGEFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + +I + L +Q E G+ + V Sbjct: 60 QNERNRMQAQLGDYFSTLLADPNYVESFRKSVLDRMINDLLLEQHAESLGLRVSDSQVRS 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQG---IGDNHFKQYLAIQSIWPDVVKN----------- 150 V + D + + F +YL + ++ Sbjct: 120 MIVDMPQFQVDGKFDQEIYQASLRRAGFSPDSFAEYLRRDLVRNQLLTAIQASDFSLEGE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 DF K E EI + R ++ Sbjct: 180 VEAQSKLLTQTREIKKVTLSLSDFASKAELSEQEINDYYTQNPERYTRPEQVKVAYVELS 239 Query: 185 -FSIPDNKLQNQGFVQKRIKDAEES----------------------------RLRLPKD 215 + D + ++ ++ + Sbjct: 240 AQQLKDAIDVSDEQAKQYYQEHLDKYSSEEQRRVSHILIEGDDEAKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 E+ + G ++ + P F+ K + T + G I + Sbjct: 300 ATLAEEKSDDFGSASEGGSLGWIERDVMDPAFEEAAFALKKAGDVTGLVKSDFGYHIIKL 359 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +D + + + + + E +L + A Y Sbjct: 360 DELKDSVAKPYEEVASEIKQELKDQQAIDQFYELQSQLETVAF-EY 404 >gi|326560318|gb|EGE10706.1| peptidyl-prolyl cis-trans isomerase SurA [Moraxella catarrhalis 7169] gi|326566363|gb|EGE16513.1| peptidyl-prolyl cis-trans isomerase SurA [Moraxella catarrhalis BC1] Length = 434 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 114/318 (35%), Gaps = 20/318 (6%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISK-------RIALLK 64 K + + +VS S + + I +N E+I ++++ I Sbjct: 4 KFIIKTLTAAVISCTSLVSQASISGNSHDGIVAVVNDEIILKSELNQATELVATEIQKNG 63 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSS 122 + + +A+ ELI E L+ I ++G+ + ++ +Q A++ G++ +E S Sbjct: 64 GNVTQDQAQTLALDELINEKLQLAIINRAGVVPNDEVIDQQLLQIAQSQGVNSLSEFQSK 123 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 ++ + L + + +N + + +I A ++ + + R Sbjct: 124 LDAERAGSYVALRANLIQDAAIQALWQNQIQSRVRITDDQIDAFLSSPESARLNQVQYRL 183 Query: 183 VLFSIPDNKLQNQG---FVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYL 237 + +P + + +S L + ++ + A D+ + Sbjct: 184 LHIRVPYLDNTASEQNRQQAALVAERVKSSLDAGMNLDQAMQNARGDYTPDLQGADTGLI 243 Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNT 293 + L P + K + T+ P VT G++ + + +K+ I K +++ A+ Sbjct: 244 NATALPPAIAAKVDKLTIGQTSTPIVTVNGIDIVKVVNKQQQNQVIVPKWQTSHILARID 303 Query: 294 PTKIEKHEAEYVKKLRSN 311 + + + + Sbjct: 304 SNQSSDIAEQKINAIYQQ 321 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 60/165 (36%), Gaps = 3/165 (1%) Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 ++I K + V +T + Q+ +++I + + Sbjct: 269 VTVNGIDIVKVVNKQQQNQVIVPKWQTSHILARIDSNQSSDIAEQKINAIYQQLQQGADF 328 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAIC 273 ++ G ++ E D+ P+F+ ++K + + + + P+ +Q G + + Sbjct: 329 GTLAATYSDDTGSASQHGSLGWVNEGDMVPEFETMMKNTAKGDFSTPFRSQFGWHILKVN 388 Query: 274 DKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 D + + + + +++++LRS+A I Y Sbjct: 389 DIKQHDITEQYRRNAAHEYLFLRSAPQAQEDWLQELRSSAYIKIY 433 >gi|326575894|gb|EGE25817.1| peptidyl-prolyl cis-trans isomerase SurA [Moraxella catarrhalis CO72] Length = 434 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 114/318 (35%), Gaps = 20/318 (6%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISK-------RIALLK 64 K + + +VS S + + I +N E+I ++++ I Sbjct: 4 KFIIKTLTAAVISCTSLVSQASISGNSHDGIVAVVNDEIILKSELNQATELVATEIQKNG 63 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSS 122 + + +A+ ELI E L+ I ++G+ + ++ +Q A++ G++ +E S Sbjct: 64 GNVTQDQAQTLALDELINEKLQLAIINRAGVVPNDEVIDQQLLQIAQSQGVNSLSEFQSK 123 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 ++ + L + + +N + + +I A ++ + + R Sbjct: 124 LDAERAGSYAALRANLIQDAAIQALWQNQIQSRVRITDDQIDAFLSSPESARLNQVQYRL 183 Query: 183 VLFSIPDNKLQNQG---FVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYL 237 + +P + + +S L + ++ + A D+ + Sbjct: 184 LHIRVPYLDNTASEQNRQQAALVAERVKSSLDAGMNLDQAMQNARGDYTPDLQGADTGLI 243 Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNT 293 + L P + K + T+ P VT G++ + + +K+ I K +++ A+ Sbjct: 244 NATALPPAIAAKVDKLTIGQTSTPIVTVNGIDIVKVVNKQQQNQVIVPKWQTSHILARID 303 Query: 294 PTKIEKHEAEYVKKLRSN 311 + + + + Sbjct: 304 SNQSSDIAEQKINAIYQQ 321 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 60/165 (36%), Gaps = 3/165 (1%) Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 ++I K + V +T + Q+ +++I + + Sbjct: 269 VTVNGIDIVKVVNKQQQNQVIVPKWQTSHILARIDSNQSSDIAEQKINAIYQQLQQGADF 328 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAIC 273 ++ G ++ E D+ P+F+ ++K + + + + P+ +Q G + + Sbjct: 329 GTLAATYSDDTGSASQHGSLGWVNEGDMVPEFETMMKNTAKGDFSTPFRSQFGWHILKVN 388 Query: 274 DKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 D + + + + +++++LRS+A I Y Sbjct: 389 DIKQHDITEQYRRNAAHEYLFLRSAPQAQEDWLQELRSSAYIKIY 433 >gi|224825282|ref|ZP_03698387.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lutiella nitroferrum 2002] gi|224602203|gb|EEG08381.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lutiella nitroferrum 2002] Length = 264 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 77/302 (25%), Gaps = 51/302 (16%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-----ELEKIA 76 L V + A + T+NG I D+ + + +L L + Sbjct: 6 LAALLFVAAIGIPGLAAAQA-VATVNGVAIDKKDVDEAVTMLSKNSNGKVQDSPALREQI 64 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + LI + L QE + G+ + V Q Sbjct: 65 KENLINKQLILQEATRRGLEKQPDFV------------------------------ERLQ 94 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + + + Q + + + Sbjct: 95 NVREEMLRDALFAEIVKQSPVTDAKIKARYDQLASQQAGSKEVHARQIMV---------- 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQNLLKKSQN 255 + + K + + + S G + S + P+ LK Sbjct: 145 ASEAEASKVIADLKKGKKFEDLAKTLSKDPAAKQSGGDMGWGNLSQMEPKLAEALKGLGK 204 Query: 256 NTT--NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + P+ + G I D RD + AQ ++ A+ V +LRS A Sbjct: 205 GQSSSQPFKSGLGWHVFKIEDIRDAKL--PPLNEVKAQIARQIQQEDVAKAVGELRSKAK 262 Query: 314 IH 315 I Sbjct: 263 IQ 264 >gi|237730418|ref|ZP_04560899.1| peptidyl-prolyl cis-trans isomerase [Citrobacter sp. 30_2] gi|226905957|gb|EEH91875.1| peptidyl-prolyl cis-trans isomerase [Citrobacter sp. 30_2] Length = 624 Score = 93.2 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 38/396 (9%), Positives = 102/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +NG+ I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNF-AAKVNGQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + L+ E L Q + + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLVDEALLDQYSRELKLNISDDQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQS------------------- 142 +++ +++ G+ + + Q L Q Sbjct: 120 AIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 143 --------IWPDVVKND------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +V+ K E E+ + ++ KN + R + Sbjct: 180 TDELAALVAQQRIVREATIDVNALAAKQSVTEQEVASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AAAMQETASDADIQSYYDQHQDQFTQPQRNRYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I G +L +S + +N K + + + G + D + Sbjct: 300 KEKSADIISARKGGDMGWLEDSTTPDELKNAGLKEKGQLSGVIKSSVGFLVARLDDVQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + ++A+ K +K+ A Sbjct: 360 QVKPLSEARDEIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|298529972|ref|ZP_07017374.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfonatronospira thiodismutans ASO3-1] gi|298509346|gb|EFI33250.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfonatronospira thiodismutans ASO3-1] Length = 628 Score = 93.2 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 36/402 (8%), Positives = 92/402 (22%), Gaps = 97/402 (24%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I + ++I+F + S+ INGE I+ + ++ Sbjct: 1 MLDIMRRNAQSWIVKVLFGVIVIVFVFWGVGSFTEDDRE--TLAVINGEPISIQEFARAY 58 Query: 61 ALLKLQKINGE------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 L + +++ L Q+ + G++ + Sbjct: 59 ESTAHSMREQNPGLSREDMRSMQLREQVFNQMVNSKLLVQKASQLGLSVSREQLQQEITS 118 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN------------------ 150 ++ +++ Sbjct: 119 LPAFFDEENRFDPQRYEQVLRSHRLTPSQFERDFRHNLLMEKMEEYVSLPAKPNEHEVQE 178 Query: 151 -------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL------- 184 +F K E +I Q ++ + IR Sbjct: 179 FFNYVRSQAKIDYKLFEADEFHDKVSITEEQIKEYYQDNQDRFMEPEKIRIAHLELSPDA 238 Query: 185 ---------------FSIPDNKLQNQGFVQKRI-----------------KDAEESRLRL 212 F ++ + V+ R ++ E L Sbjct: 239 LAGAQRVSSEEVEAYFQSHQSEFEQPEEVKARHILVEVEEDAPELEQEQARERIEQILAE 298 Query: 213 PKDCNKLEKFASKIHDV----SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 + E+ A + G ++ F+ + ++P T+ G Sbjct: 299 LEMGQSFEELAREHSQCPSAAEGGDLGRFGRGEMVEPFEEAAFDLTPGEVSSPVQTRFGW 358 Query: 268 EYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 I + + + ++ + + K +Y Sbjct: 359 HLIKVEEYVEAASPDLEEVEDEIRRKIGREKAADQIGDYADD 400 >gi|94310806|ref|YP_584016.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cupriavidus metallidurans CH34] gi|93354658|gb|ABF08747.1| Peptidyl-prolyl cis-trans isomerase [Cupriavidus metallidurans CH34] Length = 264 Score = 93.2 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 91/309 (29%), Gaps = 53/309 (17%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + T+ + ++ S ++A + +NG+ I+ + K IA Q EL Sbjct: 1 MKTSVLSFSLAAVLAAGSLPAFAQN---AAVVNGKPISSAKVDKLIASTG-QPETPELRD 56 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A LI L QE K GI Q Sbjct: 57 RARNMLIDRELLLQEANKRGI------------------------------TQRDDVQEQ 86 Query: 135 KQYLAIQSIWPDVVKNDFMLK-YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + + V ++ + E+ K K + +EY +R +L + Sbjct: 87 LEQARLNVLAGAVFEDYVRTHGASDEELRKQYEKIKAQFGNGKEYHVRHILVEKEADAKA 146 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLK 251 ++ K + + + + G + S P+F + Sbjct: 147 LIAKIKA-----------GAKFEDVAKAQSKDTGSAANGGDLDWANSSSYVPEFSAAMTN 195 Query: 252 KSQNNTTN-PYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTK--IEKHEAEYVK 306 + T+ P TQ G I + D RD +K L + + +K Sbjct: 196 LKKGQMTDTPVKTQFGWHIIELVDTRDAKIPSFEEVKPQLQQMMMGDQGWQREQFQAMMK 255 Query: 307 KLRSNAIIH 315 L+ A I Sbjct: 256 SLKDKAKIQ 264 >gi|301165393|emb|CBW24964.1| putative peptidyl-prolyl cis-trans isomerase [Bacteriovorax marinus SJ] Length = 271 Score = 93.2 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 78/296 (26%), Gaps = 38/296 (12%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA-LLKLQKINGELEKIAVQELI 81 + V ++S S A + T++G I ++ K L + + ++I Sbjct: 6 LAITSVLLLSTTSMAAKDPVVATVDGISIKKSELEKTYQENLMFVSDKRVTRQKVLNDII 65 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 L + +K+ + D + Sbjct: 66 NRKLGIKRAKKANLDNDPIVKQKMEDIMYHAQISKDLEPR-------------------- 105 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + K + ++ + L R K +N+ + + Sbjct: 106 -----------LKKIVVTDADVDKYYKDHPEYRTAHILFRVR---TNPEKEENEAALNQA 151 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNP 260 +K + + KF+ + G + L F + K+ N T P Sbjct: 152 LKVYNTLKKKPELFSELANKFSQSSTAPNGGDMGFQPAIRLAPEYFNAIKGKADNFITPP 211 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 TQ G I + + + K + Y +LR+ A I Sbjct: 212 VKTQFGYHIIKVMAVKSVKSINNAL--YKKIVYDQKRDAILDNYFSELRAKANIKI 265 >gi|158319280|ref|YP_001511787.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkaliphilus oremlandii OhILAs] gi|158139479|gb|ABW17791.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkaliphilus oremlandii OhILAs] Length = 249 Score = 93.2 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 84/285 (29%), Gaps = 47/285 (16%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQK----INGELEKIAVQELIVETLKKQEIEKSG 94 ++++ T+ G IT D + L Q+ + +K VQEL+ + L E K+G Sbjct: 3 NNKVLATVGGREITQQDFDLLLGSLNPQQAMQFNSEAGKKQLVQELVNQELFLLEALKNG 62 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 + D + +I ++ + Sbjct: 63 LDKDEVFIQEA-------------------------------QRMHDNILKQYAMHNVLK 91 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 E ++ + + ++ +++ + + Sbjct: 92 NATVSEEDMLNYYNEHTDSFKEPESMQASHIL---------VESEEKANEVLKEINEGLS 142 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 +K ++ + G + + P+F+N + P TQ G I Sbjct: 143 FEEAAKKHSTCPSNAQGGDLGHFTRGRMVPEFENAAFDMEVGAVSAPVKTQFGYHIIKAV 202 Query: 274 DK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +K + +K L+ Q + K ++ V +L+ + Sbjct: 203 NKVEESVKPFAEVKMQLNQQLSMMKQQELYLNKVDELKKEYEVQI 247 >gi|154502709|ref|ZP_02039769.1| hypothetical protein RUMGNA_00522 [Ruminococcus gnavus ATCC 29149] gi|153796592|gb|EDN79012.1| hypothetical protein RUMGNA_00522 [Ruminococcus gnavus ATCC 29149] Length = 246 Score = 93.2 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 30/277 (10%), Positives = 75/277 (27%), Gaps = 38/277 (13%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 M +I + G I + D K + + ++ Q+ + + + + G Sbjct: 1 MEQKIIAVVAGREIKESDFEKFLQNVPREQQAYLSNPQFRQQCLDQFVALHMFAELGGEM 60 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + A + I + + M Sbjct: 61 KLEETEEY---------------------------QEMVENAKRDILAQMTMREVMKDAV 93 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E ++ ++ K + +R + + + + + Sbjct: 94 VTEEDVKNYYEEHKQQFTKGETVRAKHILTDSKEKCDAILAAIQSGE--------TSFED 145 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ G + + +F++ P TQ G I + +K+ Sbjct: 146 AAKEKSTCPSGAKGGDLGEFGKGQMVKEFEDAAFTAEIGAIVGPVQTQFGYHLIKVEEKK 205 Query: 277 DLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 D +K + Q + K ++ VK+LR Sbjct: 206 DAAVADFEEVKNSIRNQLLQQRQNKVYSDKVKELREK 242 >gi|326570911|gb|EGE20935.1| peptidyl-prolyl cis-trans isomerase SurA [Moraxella catarrhalis BC7] Length = 434 Score = 93.2 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 114/318 (35%), Gaps = 20/318 (6%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISK-------RIALLK 64 K + + +VS S + + I +N E+I ++++ I Sbjct: 4 KFIIKTLTAAVISCTSLVSQASISGNSHDGIVAVVNDEIILKSELNQATELVATEIQKNG 63 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSS 122 + + +A+ ELI E L+ I ++G+ + ++ +Q A++ G++ +E S Sbjct: 64 GNVTQDQAQTLALDELINEKLQLAIINRAGVIPNDEVIDQQLLQIAQSQGVNSLSEFQSK 123 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 ++ + L + + +N + + +I A ++ + + R Sbjct: 124 LDAERAGSYVALRANLIQDAAIQALWQNQIQSRVRITDDQIDAFLSSPESARLNQVQYRL 183 Query: 183 VLFSIPDNKLQNQG---FVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYL 237 + +P + + +S L + ++ + A D+ + Sbjct: 184 LHIRVPYLDNTASEQNRQQAALVAERVKSSLDAGMNLDQAMQNARGDYTPDLQGADTGLI 243 Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNT 293 + L P + K + T+ P VT G++ + + +K+ I K +++ A+ Sbjct: 244 NATALPPAIAAKVDKLTIGQTSTPIVTVNGIDIVKVVNKQQQNQVIVPKWQTSHILARID 303 Query: 294 PTKIEKHEAEYVKKLRSN 311 + + + + Sbjct: 304 SNQSSDIAEQKINAIYQQ 321 Score = 89.7 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 60/165 (36%), Gaps = 3/165 (1%) Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 ++I K + V +T + Q+ +++I + + Sbjct: 269 VTVNGIDIVKVVNKQQQNQVIVPKWQTSHILARIDSNQSSDIAEQKINAIYQQLQQGVDF 328 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAIC 273 ++ G ++ E D+ P+F+ ++K + + + + P+ +Q G + + Sbjct: 329 GTLAATYSDDTGSASQHGSLGWVNEGDMVPEFETMMKNTAKGDFSTPFRSQFGWHILKVN 388 Query: 274 DKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 D + + + + +++++LRS+A I Y Sbjct: 389 DIKQHDITEQYRRNAAHEYLFLRSAPQAQEDWLQELRSSAYIKIY 433 >gi|296113335|ref|YP_003627273.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis RH4] gi|295921029|gb|ADG61380.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis RH4] gi|326563565|gb|EGE13824.1| peptidyl-prolyl cis-trans isomerase SurA [Moraxella catarrhalis 12P80B1] gi|326570173|gb|EGE20218.1| peptidyl-prolyl cis-trans isomerase SurA [Moraxella catarrhalis BC8] Length = 434 Score = 93.2 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 114/318 (35%), Gaps = 20/318 (6%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISK-------RIALLK 64 K + + +VS S + + I +N E+I ++++ I Sbjct: 4 KFIIKTLTAAVISCTSLVSQASISGNSHDGIVAVVNDEIILKSELNQATELVATEIQKNG 63 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSS 122 + + +A+ ELI E L+ I ++G+ + ++ +Q A++ G++ +E S Sbjct: 64 GNVTQDQAQTLALDELINEKLQLAIINRAGVIPNDEVIDQQLLQIAQSQGVNSLSEFQSK 123 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 ++ + L + + +N + + +I A ++ + + R Sbjct: 124 LDAERAGSYVALRANLIQDAAIQALWQNQIQSRVRITDDQIDAFLSSPESARLNQVQYRL 183 Query: 183 VLFSIPDNKLQNQG---FVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYL 237 + +P + + +S L + ++ + A D+ + Sbjct: 184 LHIRVPYLDNTASEQNRQQAALVAERVKSSLDAGMNLDQAMQNARGDYTPDLQGADTGLI 243 Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNT 293 + L P + K + T+ P VT G++ + + +K+ I K +++ A+ Sbjct: 244 NATALPPAIAAKVDKLTIGQTSTPIVTVNGIDIVKVVNKQQQNQVIVPKWQTSHILARID 303 Query: 294 PTKIEKHEAEYVKKLRSN 311 + + + + Sbjct: 304 SNQSSDIAEQKINAIYQQ 321 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 60/165 (36%), Gaps = 3/165 (1%) Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 ++I K + V +T + Q+ +++I + + Sbjct: 269 VTVNGIDIVKVVNKQQQNQVIVPKWQTSHILARIDSNQSSDIAEQKINAIYQQLQQGADF 328 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAIC 273 ++ G ++ E D+ P+F+ ++K + + + + P+ +Q G + + Sbjct: 329 GTLAATYSDDTGSASQHGSLGWVNEGDMVPEFETMMKNTAKGDFSTPFRSQFGWHILKVN 388 Query: 274 DKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 D + + + + +++++LRS+A I Y Sbjct: 389 DIKQHDITEQYRRNAAHEYLFLRSAPQAQEDWLQELRSSAYIKIY 433 >gi|326562023|gb|EGE12353.1| peptidyl-prolyl cis-trans isomerase SurA [Moraxella catarrhalis 103P14B1] gi|326574518|gb|EGE24460.1| peptidyl-prolyl cis-trans isomerase SurA [Moraxella catarrhalis 101P30B1] gi|326576358|gb|EGE26267.1| peptidyl-prolyl cis-trans isomerase SurA [Moraxella catarrhalis O35E] Length = 434 Score = 93.2 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 114/318 (35%), Gaps = 20/318 (6%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISK-------RIALLK 64 K + + +VS S + + I +N E+I ++++ I Sbjct: 4 KFIIKTLTAAVISCTSLVSQASISGNSHDGIVAVVNDEIILKSELNQATELVATEIQKNG 63 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSS 122 + + +A+ ELI E L+ I ++G+ + ++ +Q A++ G++ +E S Sbjct: 64 GNVTQDQAQTLALDELINEKLQLAIINRAGVIPNDEVIDQQLLQIAQSQGVNSLSEFQSK 123 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 ++ + L + + +N + + +I A ++ + + R Sbjct: 124 LDAERAGSYAALRANLIQDAAIQALWQNQIQSRVRITDDQIDAFLSSPESARLNQVQYRL 183 Query: 183 VLFSIPDNKLQNQG---FVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYL 237 + +P + + +S L + ++ + A D+ + Sbjct: 184 LHIRVPYLDNTASEQNRQQAALVAERVKSSLDAGMNLDQAMQNARGDYTPDLQGADTGLI 243 Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNT 293 + L P + K + T+ P VT G++ + + +K+ I K +++ A+ Sbjct: 244 NATALPPAIAAKVDKLTIGQTSTPIVTVNGIDIVKVVNKQQQNQVIVPKWQTSHILARID 303 Query: 294 PTKIEKHEAEYVKKLRSN 311 + + + + Sbjct: 304 SNQSSDIAEQKINAIYQQ 321 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 60/165 (36%), Gaps = 3/165 (1%) Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 ++I K + V +T + Q+ +++I + + Sbjct: 269 VTVNGIDIVKVVNKQQQNQVIVPKWQTSHILARIDSNQSSDIAEQKINAIYQQLQQGADF 328 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAIC 273 ++ G ++ E D+ P+F+ ++K + + + + P+ +Q G + + Sbjct: 329 GTLAATYSDDTGSASQHGSLGWVNEGDMVPEFETMMKNTAKGDFSTPFRSQFGWHILKVN 388 Query: 274 DKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 D + + + + +++++LRS+A I Y Sbjct: 389 DIKQHDITEQYRRNAAHEYLFLRSAPQAQEDWLQELRSSAYIKIY 433 >gi|302381139|ref|YP_003816962.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brevundimonas subvibrioides ATCC 15264] gi|302191767|gb|ADK99338.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brevundimonas subvibrioides ATCC 15264] Length = 317 Score = 93.2 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 34/318 (10%), Positives = 86/318 (27%), Gaps = 51/318 (16%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + S + + + + + + C + R + + I D+ + Sbjct: 1 MRHSRNPLVLIAFSAVLALAACGRGGGDDQPPEPGDRAVARVQDQTIWASDVKREAVAQG 60 Query: 65 L------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 L I L + + E++ + L +E E+ G+ Sbjct: 61 LVGEGEPLDITSNLFRRVLDEVVDQKLLAREAERRGL----------------------- 97 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + + + +V+N + + ++ +Q T E Sbjct: 98 -------DNSALAQRRLEATRERILGDMLVENVVNGRINDQAVQTLYQEQLRLARTSEEI 150 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYL 237 +R +L + ++ + S G Y Sbjct: 151 RVRLILSRTKPEADA-----------VIGILGQGASFEAVAQERSIDEATRFSGGDLGYS 199 Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 + + L+ + +T P+ T+ G + + D+R Q Sbjct: 200 TADVMPQAYAGALRDAPAGSTVGPFQTEGGWAVLRVEDRRRESP--PTLDQARPQIVRYL 257 Query: 297 IEKHEAEYVKKLRSNAII 314 + + +++LR A + Sbjct: 258 TYEGVRQLLEELRGKAKV 275 >gi|160947418|ref|ZP_02094585.1| hypothetical protein PEPMIC_01352 [Parvimonas micra ATCC 33270] gi|158446552|gb|EDP23547.1| hypothetical protein PEPMIC_01352 [Parvimonas micra ATCC 33270] Length = 247 Score = 93.2 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 83/284 (29%), Gaps = 46/284 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALL---KLQKINGELEKIAVQELIVETLKKQEIEKSG 94 M S++ +NG I + D+ + I L+ L N E +K +EL+ + L Q+ Sbjct: 1 MESKVMAIVNGVEILESDVDRFIELMGDRALPYKNPEGKKQLCEELVKQELIIQDCYNRK 60 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 + V + + + F Sbjct: 61 LNESEAFVKEI------------------------------NEITRSILAKHFLNELFGD 90 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + EI ++ KN+ Y + +++ + ++ + Sbjct: 91 -IKVSDEEIKKYYEENKNLFKSRYTFKAKHIL---------VESEEKADELKKLCENGEE 140 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAIC 273 +K++ G + + +F+N + T P TQ G I + Sbjct: 141 FEELAKKYSMCPSKEVGGDLGEFSQGQMVLEFENACIDARVGEITKPVKTQFGYHLIMLE 200 Query: 274 DKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + +K + K + + + L +A I Sbjct: 201 SKTEPEQLDLETVKDEIRKNIVKAKEQIAYVKKMDALMKDAKIE 244 >gi|82703233|ref|YP_412799.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosospira multiformis ATCC 25196] gi|82411298|gb|ABB75407.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosospira multiformis ATCC 25196] Length = 265 Score = 93.2 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 90/307 (29%), Gaps = 46/307 (14%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 + + + + I + A + +NG I + + Q Sbjct: 1 MHFMKFTRLAALGISGLIAATTVQAQTGSTMAKVNGTPIPQSRLEFIMKARASQGQPDTP 60 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 E K ++LI E + QE +K G+ D + + Sbjct: 61 EARKALREDLITEEVIAQEAKKKGLDRDPDFITQL------------------------- 95 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 +A Q+ + D++ + + E+ + +K + + + Sbjct: 96 ------DMARQTAMVRAYQIDYIKNHPVSDEELHKEYETVKTQMGDKEYKAHHILVATEE 149 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNL 249 + ++ K+ ++ EK G+ + + F + L Sbjct: 150 EAKDIIAKLKKGAKFDKL---------AGEKSLDTGSKSKGGELDWSPAASYVQPFAEAL 200 Query: 250 LKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 K + T+ P T G I + D R L I + +++ A + L Sbjct: 201 TKLHKGQLTDQPVKTPFGWHVIRLDDVRPLK--IPPFEEIKQNLAQRVLQRQFAASINDL 258 Query: 309 RSNAIIH 315 RS A + Sbjct: 259 RSKAKVE 265 >gi|330991867|ref|ZP_08315816.1| Cell-binding factor 2 [Gluconacetobacter sp. SXCC-1] gi|329760888|gb|EGG77383.1| Cell-binding factor 2 [Gluconacetobacter sp. SXCC-1] Length = 305 Score = 93.2 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 27/280 (9%), Positives = 76/280 (27%), Gaps = 50/280 (17%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGI 95 + + ++NG+ I D+ + +A + Q + I + +L+ + + K+G+ Sbjct: 47 QNPVLASVNGQDIRLNDVRQAMASMPEQLRKLPDNIIVPILLNQLVDQRAIQIAAAKAGL 106 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + + + Sbjct: 107 DKQPDVQQQMQQAAQNALQNA------------------------------YLSAQVAPT 136 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + ++ ++ E R +L + D + Sbjct: 137 LTDEAVKTYYDQNYANKPGAEEVHARHIL-----------VKSEAEANDIIKQLKAGADF 185 Query: 216 CNKLEKFASKIH--DVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTN-PYVTQKGVEYIA 271 K ++ + G + + D+ + N+ + P TQ G I Sbjct: 186 GQLATKLSTDPGSAKQNGGDLGWFKKGDMLPTFWDAASAMQPNSFSQTPVHTQYGWHVIQ 245 Query: 272 ICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + KR A++ + + ++K + + +++ Sbjct: 246 VLGKRTAPTPTLDAMRDQIRQKLIQEGVQKAVSNALSQVK 285 >gi|118595195|ref|ZP_01552542.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylophilales bacterium HTCC2181] gi|118440973|gb|EAV47600.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylophilales bacterium HTCC2181] Length = 428 Score = 93.2 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 101/313 (32%), Gaps = 19/313 (6%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--- 65 + I L ++ + Y + +I + +VIT ++ I Sbjct: 1 MWSVINSLIFIVLIASHACLSWG-YDDYEPLDKIVAVVEKDVITKKEMEHGIESFNKGLR 59 Query: 66 ------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 E+ +I + ELI + + Q E+S I D ++ A N ++ E Sbjct: 60 GSNPNNLPSEKEIREIVLDELIEKKIISQYAEQSQIIIDIQQIDNALKNIAANNNITLEQ 119 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 K+ G + + + Q + + + + EI +K + +Y Sbjct: 120 LKE-SAKKSGGLDDLYEEVRFQLTLRIIKERAIFSQINISDYEIKKFIEKERLRNPDQYS 178 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 I +L +++ ++R ++ + + G + Sbjct: 179 ISHILLKKNSGDENQLTLKLEKVLIELQNRP----FDEVAQELSDGPYAEKGGLMGWFEL 234 Query: 240 SDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA---YLSAQNTPT 295 + L F +++ S + P+++ G + + + + + + + ++ Sbjct: 235 NSLPNIFVEHVKGMSVREISKPFLSDNGYHILLVNEMQSKSTKEKIYSTQYNINQILLKK 294 Query: 296 KIEKHEAEYVKKL 308 E + + KL Sbjct: 295 NQVTAENDLISKL 307 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 86/270 (31%), Gaps = 6/270 (2%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I+D +I K I +L+ + + L + + ++ N F + A Sbjct: 157 ISDYEIKKFIEKERLRNPDQYSISHIL--LKKNSGDENQLTLKLEKVLIELQNRPFDEVA 214 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAI-QSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + L ++ ++ + + + F+ G + + + K Sbjct: 215 QELSDGPYAEKGGLMGWFELNSLPNIFVEHVKGMSVREISKPFLSDNGYHILLVNEMQSK 274 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHD 228 + + N++ + + ++ + + +++ Sbjct: 275 STKEKIYSTQYNINQILLKKNQVTAENDLISKLNNIKNQISDGLPFAEAASQYSEDLSSA 334 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNN-TTNPYVTQKGVEYIAICDKRDLGGEIALKA- 286 G+ ++ ++L P+FQ L + NN P+ T G I + KRD ++ Sbjct: 335 KKNGELGWVDRNNLLPEFQVELDNASNNSIVGPFKTAAGWHLIELIAKRDKDITEESQSL 394 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 Q K E ++ L+ + I Sbjct: 395 SARLQLLNYKAEIRYKDWFHDLKQQSNIEI 424 >gi|209517045|ref|ZP_03265893.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. H160] gi|209502576|gb|EEA02584.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. H160] Length = 259 Score = 93.2 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 81/278 (29%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I I L + Q+ +L++ +EL+ + QE + G+ + Sbjct: 25 IAVVNGTPIPKSRADALIQQLVHQGQQDTPQLQQAVREELVNREILMQEALRRGLPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + DF+ + Sbjct: 85 VKAQV-------------------------------AVAQQTVVLRALIEDFVKNNQPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 EI A + + + + + ++ K + + Sbjct: 114 AEITARYNALVKDAGGQEYHLHHILVDNEQQAKDLIAKIKA----------GASFEDLAK 163 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F + + T+ P TQ G I + D R Sbjct: 164 QYSKDPGSGKNGGDLDWSDPKAYVPEFADAATHLQKGQMTDTPVHTQFGWHIIRVDDIRA 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + AQ ++ + + LR NA I Sbjct: 224 VTP--PPLEQVRAQIVQQIQQEKLQAFEENLRKNARIQ 259 >gi|54288331|gb|AAV31619.1| predicted parvulin-like peptidyl-prolyl isomerase [uncultured alpha proteobacterium EBAC2C11] Length = 289 Score = 92.8 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 73/303 (24%), Gaps = 49/303 (16%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRI-RTTINGEVITDGDISKRIALLKL---QKINGELE 73 ++ ++ + A RI T+NGE I D+ ++ L Q Sbjct: 10 FICLIAGATLLAGTTNMVQADEDRIPVGTVNGETIWLDDVMRQAERLPAKFRQAPMESYF 69 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 V ++I + + + Sbjct: 70 NQLVTDMIDSKIAADAARAAKYDTKKEIASA----------------------------- 100 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + A + + + + +E + + +L Sbjct: 101 -MKTAADRVLAESWIGEKISGDVTDAAIEKAYKTFVADTASREQVTAAHIL--------- 150 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 + K S ++ + G + P F+N Sbjct: 151 --VATEDEAKKIIASLAGGADFAELARSKSTGPSGPNGGSLGKFGRGQMVPAFENAAFAL 208 Query: 254 QNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ TT P TQ G I + K + Q T + +++LR+ Sbjct: 209 EDGKITTQPVQTQFGWHVIKVESKEIAPA--PTIEDMREQLVQTLSTQALGRVLEELRAK 266 Query: 312 AII 314 I Sbjct: 267 QEI 269 >gi|320103011|ref|YP_004178602.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Isosphaera pallida ATCC 43644] gi|319750293|gb|ADV62053.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Isosphaera pallida ATCC 43644] Length = 370 Score = 92.8 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 87/285 (30%), Gaps = 16/285 (5%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQEIEKSGITF 97 + +N IT D+ + +A ++L + +AV+ L+ L Q + + GIT Sbjct: 61 DQPLAVVNATPITRRDVQRIMAQIELAPGAEIQDAYNMAVEMLVNTELLFQFLNRQGITV 120 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 ++ + + + L G ++ L +W ++ + Sbjct: 121 TKKDLDDELARLSESLKAQNLTLEQALAANGATMQELQKDLTRAKLW-----EKYVTRVA 175 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK--D 215 E + R +L +P+ + K A ++ + K Sbjct: 176 TEERLKKYVADNQDLFNGVKVTARHILLKVPEGASEEVKASIKAKLLAIKAEIESGKIEF 235 Query: 216 CNKLEKFASKI---HDVSIGKAQYL-LESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYI 270 +K++ S G L +F + K ++P T+ G I Sbjct: 236 AEAADKYSEDDGNKQQPSGGFLGEFYRRGQLIEEFAEAAFKCKPGVISDPVETEFGYHLI 295 Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + ++ + K + E + ++ A I Sbjct: 296 LVTNRDEGQPFDFEKG--RDIAFQQFESELREEVILAEKAKAKIE 338 >gi|254511943|ref|ZP_05124010.1| ppic-type ppiase domain protein [Rhodobacteraceae bacterium KLH11] gi|221535654|gb|EEE38642.1| ppic-type ppiase domain protein [Rhodobacteraceae bacterium KLH11] Length = 417 Score = 92.8 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 98/290 (33%), Gaps = 12/290 (4%) Query: 6 FTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKR 59 +S F K L + I + ++ S +N +++T ++ +R Sbjct: 1 MQLISGFTKFLRSGCRASILPVMALALTAMATPQAQGQSLFSPAIRVNQDIVTWYELEQR 60 Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 L+L E + LI + L+KQ + ++GI V A LS+E+ Sbjct: 61 QQFLELLGAPNSSEIEVREALIDDRLRKQVMREAGIEAAPEAVETGIDDIAARGNLSSEE 120 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 F L+ G+ + ++A Q W D + F+ + E EI + ++ L Sbjct: 121 FLQLLNDAGVSRETVRDFVADQLTWRDYISARFLSQARPSEDEINRALGQGGGGGLQVLL 180 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 ++ P Q + + + +E + G+ +L Sbjct: 181 SEIIIPVTPQTLSQAEALADEISQLPDEQSFASAAAQYSAAD-----TRTNGGRLDWLSL 235 Query: 240 SDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 S+L P Q ++ T P V + R++ + + Sbjct: 236 SNLPPALQPVILGLKNGEITEPLSLSNAVALFQMRGIREVATAAPRYSEI 285 Score = 38.5 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 24/46 (52%) Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 ++ +C + GE + ++ T +++ +++LRS+A+I Sbjct: 369 FLMLCSRTRDLGENTTRVDVANALTQQRLQAFADSLLEQLRSDAVI 414 >gi|110677781|ref|YP_680788.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Roseobacter denitrificans OCh 114] gi|109453897|gb|ABG30102.1| PPIC-type PPIASE domain protein [Roseobacter denitrificans OCh 114] Length = 285 Score = 92.8 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 78/311 (25%), Gaps = 51/311 (16%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--- 65 + +++L + + + + + T+NGE I G + A L Sbjct: 1 MQKHLRILAFSALTAAIAAPVVAQDDTALTADTVIATVNGEDIKLGHMIAARATLGERYN 60 Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 Q +L V++LI +T Q IE N Sbjct: 61 QMPAEQLWNGIVEQLIQQTALAQGIESLSAGEAMALENQE-------------------- 100 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 ++ +++ + + E+ +L Sbjct: 101 --------------RSLKAAKAIEIGLEQAVTEEDIQAAYDAEFGNLDPEEEFNASHIL- 145 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 ++ +E+ + ++ + G+ + + P Sbjct: 146 ----------VATEEEAIAVKEAIDGGANFAATAREKSTGPSGPNGGELGWFSTGMMVPS 195 Query: 246 FQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ ++P TQ G I + D R I + Sbjct: 196 FEAATIALEVGEVSDPVETQFGWHVITLNDTRQKN--IPTLEEAREGIEARLAQDAALGI 253 Query: 305 VKKLRSNAIIH 315 ++ + A I Sbjct: 254 IQNAAAGAAIE 264 >gi|110801593|ref|YP_697584.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Clostridium perfringens SM101] gi|110682094|gb|ABG85464.1| PPIC-type PPIASE domain protein [Clostridium perfringens SM101] Length = 248 Score = 92.8 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 37/285 (12%), Positives = 78/285 (27%), Gaps = 46/285 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQELIVETLKKQEIEKS 93 M ++ T+ IT I + IA Q+ + E ++ +++ I E K Sbjct: 1 MEKKVLATVGNTEITSDYIDEIIARYPAQQQAMLASDEGKRQVLEQAIA-FELMSEFAKE 59 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + + A+ + +V + Sbjct: 60 TGLDKTEEFKDQLNKFAKE------------------------------LLAQMVMKKTL 89 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E ++ K V + + + + EE Sbjct: 90 SSVTVTDDEAKDFYEEHKENFVELETVTAKHILVASEEDAKKVE--------EEIASGSI 141 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 + K++S G + + P+F+ + P TQ G I + Sbjct: 142 TFEDAANKYSSCPSKEQGGNLGSFSKGMMVPEFEEAAFNLELGVVSAPVKTQFGYHLIKV 201 Query: 273 CDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 DK + +K + + +K E +K+LR + Sbjct: 202 EDKTEAKTKAFEDVKEQVVNMLIQERQQKKYLELIKELREKYGVK 246 >gi|71066075|ref|YP_264802.1| peptidylprolyl isomerase [Psychrobacter arcticus 273-4] gi|71039060|gb|AAZ19368.1| possible peptidylprolyl isomerase [Psychrobacter arcticus 273-4] Length = 465 Score = 92.8 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 56/163 (34%), Gaps = 3/163 (1%) Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 ++I K + T+ T + ++LQ +++I D Sbjct: 300 ITPEGIDIIKLANKKSSDTMLVPQWNTRHILVKVDELQTDALAEQKINDLYSQLRNGAAF 359 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAIC 273 ++ G ++ E + F+ ++K + + + P+ TQ G + I Sbjct: 360 DGLASTYSDDPGSAGRGGDLDWVGEDQMIGPFEAMMKNTAVGDYSAPFKTQFGWHILKIE 419 Query: 274 DKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIH 315 KR + + + + +++++LR+ A I Sbjct: 420 GKRQQDVSDEYRRTMARQALYQRLAPQAKEDWLQELRAGAYIQ 462 Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 92/310 (29%), Gaps = 26/310 (8%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--------KINGELEKIAVQEL 80 + + I +N I D+ IA + + + +L+ + L Sbjct: 48 SVARLTPANSTDGIIALVNENAILKSDLIAAIAQTQARAKAAGEPIANSAQLQSEVLNAL 107 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHAR--NTGLSAEDFSSFLDKQGIGDNHFKQYL 138 I+ L+ I++ G+ D +N Q A+ A Q + L Sbjct: 108 ILRELQLSLIKRVGLNPDEAAINKRLEQIAKAEGLNSIAALQQRLDSAQAGSYATLRAQL 167 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + + + E +I A + + + +TV +P ++ Sbjct: 168 IEDAAIQALQQRQITNRVRISEQDIDAFLASPEAKRLNQSEYQTVHVRVPYMDDYSRLSE 227 Query: 199 QKRIK--------DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250 +R + S + G + + L + + + Sbjct: 228 AQRNDALKVAQKLRTRLLVPNIDVAEAIAASQGSYPIPLQGGDMGFHKAAALPTELSSEI 287 Query: 251 KK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-------TPTKIEKHEA 302 K + P +T +G++ I + +K+ + + T E+ Sbjct: 288 TKLEVGAVSAPLITPEGIDIIKLANKKSSDTMLVPQWNTRHILVKVDELQTDALAEQKIN 347 Query: 303 EYVKKLRSNA 312 + +LR+ A Sbjct: 348 DLYSQLRNGA 357 >gi|167754419|ref|ZP_02426546.1| hypothetical protein ALIPUT_02713 [Alistipes putredinis DSM 17216] gi|167659044|gb|EDS03174.1| hypothetical protein ALIPUT_02713 [Alistipes putredinis DSM 17216] Length = 469 Score = 92.8 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 31/278 (11%), Positives = 84/278 (30%), Gaps = 14/278 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 + + ++ I + K M R+ + G I ++ + L Q+ Sbjct: 1 MSKKILFCAALVLAIFAGAAQKRQVMLDRVVAVVGGSSILWSEVDEYAGELVEQRRQQGY 60 Query: 71 ----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 + A+++L+++ L + + + + H + A ++ K Sbjct: 61 TSDRDPHDEALEQLLMQKLLFNQALIDSVDVSYSGIAQRVEAHLQALIDDAGSIAALETK 120 Query: 127 QGIGDN---HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT----VREYL 179 Q + + + + +++ + K + E+ +K + +Y+ Sbjct: 121 QHMPIFNVREMLRQRYEEQAYAQAMQSSVVGKIKVIPGEVERYYKKTDPDSLPTIPEQYV 180 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + K Q ++ + E + ++ +S G+ Sbjct: 181 YAQITRFPASIKEAKQRTKERLLDMRERIIKGQTRFDIMARMYSMDGSAISGGELDPQPL 240 Query: 240 SDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276 QF + + TQ G I + D++ Sbjct: 241 DGFVRQFADALADLKPGQVSEVVETQYGYHLIQLIDQK 278 >gi|49475012|ref|YP_033053.1| peptidyl-prolyl cis-trans isomerase [Bartonella henselae str. Houston-1] gi|49237817|emb|CAF27012.1| Peptidyl-prolyl cis-trans isomerase [Bartonella henselae str. Houston-1] Length = 317 Score = 92.8 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 31/282 (10%), Positives = 72/282 (25%), Gaps = 48/282 (17%) Query: 40 SRIRTTINGEVITDGDISK---RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 S + I+G+ +T G + + I + + + ++ + + K GI Sbjct: 49 SHVMAVIDGKEVTAGQLDELALEINPGLARFSDEQRRITVLKAYLDMLALAKAAIKEGID 108 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 + + K + + Sbjct: 109 KSETYNKR------------------------------MAVMRDNVLQQLYFKQTVVDQI 138 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + ++E K+ E R +L +K + + + Sbjct: 139 SDADLETLYKKEVAALPKEDEVKARHIL-----------VKTKKEAEAIIKRLNKGESFE 187 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICD 274 +K ++ G Y + F++ T P + G I I D Sbjct: 188 EIAKKNSTDGSAAVGGDLGYFSHGQMVKPFEDAAFGLKVGEYTKKPVESPFGWHIIKIED 247 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R + + I++ + + LR + Y Sbjct: 248 RRVKQP--PVFDDVKEMLRTQLIKERYQKLIADLRKKIDVKY 287 >gi|194289564|ref|YP_002005471.1| peptidylprolyl isomerase; exported protein [Cupriavidus taiwanensis LMG 19424] gi|193223399|emb|CAQ69404.1| putative Peptidylprolyl isomerase; putative exported protein [Cupriavidus taiwanensis LMG 19424] Length = 264 Score = 92.8 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 90/308 (29%), Gaps = 51/308 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + TT + ++ S + A + +NG+ I + K IA Q + EL Sbjct: 1 MKTTVLSFSLAAVLAAGSLPAIAQN---AAVVNGKAIPSAKLDKLIAGTG-QPDSPELRT 56 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A LI L QE K G+ Q Sbjct: 57 RARNMLIDRELLVQEANKRGL------------------------------TQRDDVQEQ 86 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + + + V + D++ +G + E+ K+K+ + Sbjct: 87 LEQARLNVLAGAVFE-DYVKTHGASDAELRKQYDKIKSQFGNGKEYHARHILVEKEADAK 145 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKK 252 + + K ++ + + + G + S P+F + Sbjct: 146 AIIAKIK---------GGAKFEDQAKAASKDPGSAANGGDLDWANSSSYVPEFSAAMTGL 196 Query: 253 SQNNTTN-PYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTK--IEKHEAEYVKK 307 + T+ P TQ G I + D RD +K L+ + + +K Sbjct: 197 KKGQMTDTPVKTQFGWHIIELVDVRDAKIPSFEEVKPQLTQMLMGDQNWQREQFQAMMKS 256 Query: 308 LRSNAIIH 315 L+ A I Sbjct: 257 LKDKARIQ 264 >gi|171914423|ref|ZP_02929893.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verrucomicrobium spinosum DSM 4136] Length = 299 Score = 92.8 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 90/286 (31%), Gaps = 16/286 (5%) Query: 43 RTTINGEVITDGDISKRIALLKLQ----------KINGELEKIAVQELIVETLKKQEIEK 92 INGE I D I + +K + + E +A L L +QE + Sbjct: 2 ALIINGETIDDEIIEEEFRHIKGHYERALQVSCCERDPEFRGMAKDNLASRALLQQESRR 61 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 + G + + S + LA +++N + Sbjct: 62 RFPEVSEGEAKARLEKLIEQAGGEEQFYMSIGMPFKDESL-LQDNLANGVRMDKMLQNVY 120 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 + E +I A + + E IR S+ + +++ V + +++ E L Sbjct: 121 SPEPEPGEADIQAYYEANVKHFLSEEQIRVSHISLNLSGARSRAEVYQTMRELREQVLGG 180 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271 + S + + + +F+ + + + TQ G Sbjct: 181 ADFDALAAEHNSNKDMSP--DLGWFKKGEFMEEFEAIAFSMRDGEISPVFTTQLGFHICR 238 Query: 272 ICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + D++ + ++ + A+ + E+++ L+ A I Sbjct: 239 LTDRKAAVPKPLDEVREAVRARILEEYRDGKFNEFLETLKGGAKIE 284 >gi|312129916|ref|YP_003997256.1| ppic-type peptidyl-prolyl cis-trans isomerase [Leadbetterella byssophila DSM 17132] gi|311906462|gb|ADQ16903.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leadbetterella byssophila DSM 17132] Length = 440 Score = 92.8 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 89/304 (29%), Gaps = 13/304 (4%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + VL + ++P+ +I I+ I ++ A + N Sbjct: 1 MLKKVVLALIMVLPLCVKAQSTNVDKIIAKIDNYYILKSEVESLRARYAKEGQN-VSSCE 59 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A++ + ++ L + E + +++ + + + +D+ G K Sbjct: 60 ALESMAIQKLLVAKAEIDSVIVENDQIKDQLDARMNQMVTVYGNEKNIVDQFGKSIETLK 119 Query: 136 QYLAIQSIWP---DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + + +K K +E+ + + ++ + + L I Sbjct: 120 NEMRSELKEQMTAEKMKGVIYEKVSVTPLEVKKFYESIPKDSLWKVGQKVKLSQIVRLAP 179 Query: 193 QNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN 248 I ++ + R ++++ + G + + P+F+ Sbjct: 180 LTPELRTDLITKLQDIKRRIQSGEDFGKLAKEYSEDQGSAANGGDLGWSKRGMMVPEFEA 239 Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVK 306 ++ ++ G I KR G+ ++ Y+ Sbjct: 240 AAMSLDTGQISDIVESEYGFHLIQTLAKR---GQEYRARHILLMPDYQILSTDEPKRYLD 296 Query: 307 KLRS 310 LR Sbjct: 297 SLRK 300 >gi|331270660|ref|YP_004397152.1| peptidil-prolyl cis-trans isomerase [Clostridium botulinum BKT015925] gi|329127210|gb|AEB77155.1| peptidil-prolyl cis-trans isomerase [Clostridium botulinum BKT015925] Length = 247 Score = 92.8 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 33/285 (11%), Positives = 80/285 (28%), Gaps = 47/285 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQELIVETLKKQEIEKS 93 M +++ ++NG+ IT+ DI I ++ + +K +++LI K Sbjct: 1 MENKVLASVNGKEITEKDIEVAIKRFPQERQAYFAGEQGKKQLLEQLIA-FELFHAYGKE 59 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + ++ + N + Sbjct: 60 NEFDKTQEFIDGIEIMKKD------------------------------ALTQMSVNKVL 89 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + + E+ K V + + + +L N + E Sbjct: 90 SEVQVTDKEVEDYYTANKKNFVVGETVSAKHILVDNEELAN---------EVAEKIKNGM 140 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 +++++ G + + P+F+ + P TQ G I + Sbjct: 141 SFDEAAKEYSTCPSKAQGGNLGKFGKGQMVPEFEEAAFNLEIGKLSEPVKTQFGYHLIEV 200 Query: 273 CDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 DK +K + A + +V++L++ + Sbjct: 201 EDKNKATEKSFDEVKDMIKANLIQQRQTAKYTTFVEELKNKYNVE 245 >gi|169830779|ref|YP_001716761.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Desulforudis audaxviator MP104C] gi|169637623|gb|ACA59129.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Desulforudis audaxviator MP104C] Length = 297 Score = 92.8 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 38/289 (13%), Positives = 83/289 (28%), Gaps = 21/289 (7%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + + +NGE I+ ++ + ++ + +QELI L QE Sbjct: 27 ALGGCGRSGDVETVAVVNGEPISRDELYAEM--------YAQMGQQTLQELITRKLIIQE 78 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 G+ V + + S E+F L G+ +Q + +Q I V+ Sbjct: 79 GRAQGVEISDADVQTRLDEVIESGFSSREEFQEALKAYGLEQKDLEQQIRVQLI----VE 134 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + E E+ + + + + + + + Sbjct: 135 GVLGKQIQLDEAEVKEYFEANRKRFGQPESLEARHIVLKTREEAESVRSELVSGADFAVL 194 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 R + + G+ + + L T G Sbjct: 195 AREKSVDPLTAGGGGGLGTIRYGEL-------IPAWQKALFGMETGLVNEVLETPSGFHV 247 Query: 270 IAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + I +K ++A + + T +I + +V L + A + Y Sbjct: 248 VEILEKHPAVEPVFADVEAKVRRELTEKEITQLYPAWVDSLWTKAKVEY 296 >gi|150388008|ref|YP_001318057.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkaliphilus metalliredigens QYMF] gi|149947870|gb|ABR46398.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkaliphilus metalliredigens QYMF] Length = 319 Score = 92.8 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 32/323 (9%), Positives = 89/323 (27%), Gaps = 36/323 (11%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--- 70 K + L+ ++ +S +NG ++ + K +AL KL Sbjct: 7 KSIGLLTALLAIMLLITACSTPAQLSQDAAAEVNGATVSMEEFDKTLALFKLSYEMQYGY 66 Query: 71 ----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 +++ +++LI + L ++ +SG+T + + + Sbjct: 67 NEDIFQQDIGGMTLLENIKEGIMEKLISDVLIAEKAVESGLTVSEEEITEAYEPYRVYEE 126 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 + + + +Q ++ ++ + E + + Sbjct: 127 SDENFSAFLKENEIDETFIREQVKKDILLFK--YRDFYNENLEMTEEAARKFFDENPEMF 184 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGK 233 + + + +++++ V G Sbjct: 185 STQEASARHILV----------ADLALADELVVRLESGEDFATLAQEYSTDPGSAVQGGD 234 Query: 234 AQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292 + + P+F+ P TQ G I + D+ D + + Sbjct: 235 LGFFPRGVMVPEFEEASFTQPIGEVGAPVQTQHGYHIILVEDRVDNSYD---FDEMKESI 291 Query: 293 TPTKIEKHEAEYVKKLRSNAIIH 315 +++++L NA + Sbjct: 292 MGYLKNLEFEKHLEELVGNAEVQ 314 >gi|303238145|ref|ZP_07324681.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acetivibrio cellulolyticus CD2] gi|302594191|gb|EFL63903.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acetivibrio cellulolyticus CD2] Length = 249 Score = 92.8 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 32/282 (11%), Positives = 83/282 (29%), Gaps = 40/282 (14%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 +++ I IT D+ + + + V++LI + +++ I Sbjct: 3 NKVFAKIGNREITSQDLQNFLQSVDPKIATQFTSPDGVKQLIAQLAEQELFYLDAIEKGL 62 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + + R + ++ + F+ Sbjct: 63 ENETEYLEEIERIKVNFLKQYAL---------------------------SKFLKSVTIN 95 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 E+E + K + ++ + D N+ + K + Sbjct: 96 EVEAKKFYNENKGLFNEPESVKASHILVQDEATANKILSE---------IDEGKKFEDAA 146 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++++ + G + + + P+F+ + T P TQ G I + KRD Sbjct: 147 KEYSTCPSKANGGDLGFFSKGQMVPEFETAAFALDKGEITKTPVKTQFGFHIIKLTGKRD 206 Query: 278 LG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + A+ K + + V +L+ + + Sbjct: 207 AMELTFSEAEDKVKAELMAKKQQAEYYKKVDELKGKYDVKLF 248 >gi|260685020|ref|YP_003216305.1| putative foldase lipoprotein [Clostridium difficile CD196] gi|260688678|ref|YP_003219812.1| putative foldase lipoprotein [Clostridium difficile R20291] gi|260211183|emb|CBA66654.1| putative foldase lipoprotein (late stage protein export lipoprotein) [Clostridium difficile CD196] gi|260214695|emb|CBE07344.1| putative foldase lipoprotein (late stage protein export lipoprotein) [Clostridium difficile R20291] Length = 321 Score = 92.8 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 37/316 (11%), Positives = 93/316 (29%), Gaps = 32/316 (10%) Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI----------------- 68 I+ + + T+ G I+ + K IAL K Sbjct: 1 MILVVSVTACSSSKGETVATVEGTKISSDEFKKTIALYKDSMEQTYGKDIWDKEVEKGVK 60 Query: 69 -NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 + + + + +LI + + +K + V F + G + Sbjct: 61 YKDKFKDLILDQLITTEVIYSQAKKDNLLPKKEDVEKSFKELKDAMGKDEKYKEQLKKLG 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + Q + +++F K + E+ K+ ++ + + + Sbjct: 121 IDDEFLRDQQEKD--LAMQNYQSNFAKKTKISDEEMKKYYDTHKDEFKKDEVEASHILLK 178 Query: 188 PDNKLQNQ------GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + +K+ ++A + +K++ GK + Sbjct: 179 TVDDNNKPLSDKEKAEAKKKAEEALKEVKSGEDFAKVAKKYSQDTSASDGGKLGFFSRGQ 238 Query: 242 LHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK-RDLGGEIALKAYLSAQNTPTKIEK 299 + +F++ + ++ TQ G I + D+ + K + Q K ++ Sbjct: 239 MVAEFEDAAFSMKKGEVSDLVETQYGYHIIKVTDRINEQTSFEDAKETIKDQLLKNKYQE 298 Query: 300 HEAEYVKKLRSNAIIH 315 ++KL A + Sbjct: 299 Q----IEKLTKEAKVE 310 >gi|258405892|ref|YP_003198634.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfohalobium retbaense DSM 5692] gi|257798119|gb|ACV69056.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfohalobium retbaense DSM 5692] Length = 626 Score = 92.4 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 24/268 (8%), Positives = 74/268 (27%), Gaps = 12/268 (4%) Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA- 110 + + R L + +L + + I +K D + + Sbjct: 132 SRYEQLLRANQLTPAQFEADLTRSLLTNKIQRAVKLPASVSEAQAKDLFAFSQEKARMEY 191 Query: 111 -----RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 ++ A + + F++ ++ + + + EI A Sbjct: 192 ALFAWQDQPGLAPNEEAVKHYYQENQKQFQRPARMEMDYLLLTPEGLAAAQPVSDEEIKA 251 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR---LPKDCNKLEKF 222 + R+ ++ I + + V + + A+ R ++ Sbjct: 252 YYEANPGEFERQEELKARHILIEVPEGADDQQVTEAREQAQALVERLRDGADLAELAREY 311 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD--LG 279 + G + ++ F+ ++P T G I + D++ Sbjct: 312 SDGPSSAQGGDLGWFARGEMVEAFEAAAFALDTGEISDPVRTSFGFHVITVEDRKPSGTQ 371 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKK 307 ++ + + K + ++ + + Sbjct: 372 PFEEVQDEIRQEIGADKAAQKMSDLLDE 399 Score = 63.2 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 22/232 (9%), Positives = 59/232 (25%), Gaps = 15/232 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + ++++F + + + + + GE I D + Sbjct: 1 MLDAMRKNAQSWAIKFLFALIILVFVFWGVGNLGNDQA--TVVAEVQGEAILIRDFQQAY 58 Query: 61 ALLKLQKING------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 +L++ + +LI L +E +K G+ + V + Q Sbjct: 59 QRTVENLRRKQPDISREDFEQMQLKRQVLNDLITSQLLFREAKKLGLAVTAPEVRQYVQQ 118 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML-KYGNLEMEIPANK 167 + S ++ + + K E A Sbjct: 119 MPVFQNADKQFDPSRYEQLLRANQLTPAQFEADLTRSLLTNKIQRAVKLPASVSEAQAKD 178 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + + N+ V+ ++ ++ R + Sbjct: 179 LFAFSQEKARMEYALFAWQDQPGLAPNEEAVKHYYQENQKQFQRPARMEMDY 230 Score = 38.1 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 28/89 (31%), Gaps = 4/89 (4%) Query: 232 GKAQYLL-ESDLHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAY-- 287 G+ ++ +++ Q PY Q+G + ++ + Sbjct: 530 GRRGFIPGLGMNPQLVESVFNAEQGQWLEKPYKVQQGYVLARLAERVAPDMSKWEEQQSL 589 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 Q ++ + Y+ +LR A + Sbjct: 590 WVGQLQQSRKQALFQAYLTQLREKAEVKI 618 >gi|300770932|ref|ZP_07080809.1| peptidyl-prolyl cis-trans isomerase [Sphingobacterium spiritivorum ATCC 33861] gi|300762205|gb|EFK59024.1| peptidyl-prolyl cis-trans isomerase [Sphingobacterium spiritivorum ATCC 33861] Length = 458 Score = 92.4 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 37/319 (11%), Positives = 105/319 (32%), Gaps = 20/319 (6%) Query: 15 LLTTYFVLIIFCIVPI-VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGE 71 ++ +VL+ + + +++ + R+ T+ +I DI + + Q N + Sbjct: 1 MIKQLYVLLFCVLGSVNLTFAQGKIVDRVVATVGANIILQSDIDMQYSQNLAQGMSPNED 60 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + +Q+L+ + L Q+ I + V+ A Sbjct: 61 FKCYILQQLLTQKLLAQQAVLDSIEVSESEVDDNLNNRLNVMTRQAGGKERLESFLNRSL 120 Query: 132 NHFKQYLAI---QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +K+ + + + ++ + + K +E+ + + ++ + + I Sbjct: 121 LQYKEEMRTSVAEQLKAQKMQQNIVQKIDVTPLEVKRYFEGLNKDSLPYFDTEVEIGEIV 180 Query: 189 DNK---LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHP 244 + + +KR +D + + ++ V+ G + + Sbjct: 181 MYPVLTKEEKEASRKRAEDLRKQIVDGSDFGTIARLYSEDKGSAVAGGDLGFSTRDNYVK 240 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP-----TKIE 298 +F K + + T+ G ++ + ++R GE ++ P + + Sbjct: 241 EFSAVAFKLKPGEISQVFETEYGFHFLQVLERR---GEEVRARHILVSIKPTNASLERTK 297 Query: 299 KHEAEYVKKLRSNAIIHYY 317 +KL + I +Y Sbjct: 298 VKMDSLYQKLINK-KIDFY 315 >gi|210613468|ref|ZP_03289727.1| hypothetical protein CLONEX_01934 [Clostridium nexile DSM 1787] gi|210151168|gb|EEA82176.1| hypothetical protein CLONEX_01934 [Clostridium nexile DSM 1787] Length = 245 Score = 92.4 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 29/281 (10%), Positives = 71/281 (25%), Gaps = 46/281 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKIN----GELEKIAVQELIVETLKKQEIEKS 93 MS + + GE IT + + + ++ + + +++LI Sbjct: 1 MSQEVLAVVAGEEITQAEFDAFLQGVPREQQPYLSNPQFREQCLEQLI------------ 48 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 A+N + + K + + + Sbjct: 49 -----------ALHMFAKNGEEMKLEETEEFKK------LVESARRDILAQMAMRETLKD 91 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E+E K + +L +K E Sbjct: 92 VVVSEEEIEAYYEANKQHFTKGDTVSAKHIL----------TDSEEKCNSILESITTGEK 141 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAI 272 + ++F++ G + +F++ + P TQ G I + Sbjct: 142 EFETAAKEFSTCPSGAKGGDLGEFGRGQMVKEFEDAAFAAEIGHVVGPVKTQFGYHLIKV 201 Query: 273 CDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 K + +K + K + V++++ Sbjct: 202 EKKNEAIVASLEEVKETIRRTLLQQKQNEAYNTKVEEMKKK 242 >gi|157362935|ref|YP_001469702.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotoga lettingae TMO] gi|157313539|gb|ABV32638.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotoga lettingae TMO] Length = 343 Score = 92.4 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 107/344 (31%), Gaps = 50/344 (14%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 ++ + + +++I +V I A + + +NG IT ++++ + +L Sbjct: 1 MRKVFMFGLILILSLVAIGQETQPATA--VVAEVNGVAITMEELNREANVDRLLSQIQSV 58 Query: 71 -------------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY----FFV 107 ++ + LI + L KQ EK G+T + + Sbjct: 59 DATFYDVLVNTSEGVNLLLRYKREVLNNLIDQVLIKQIGEKMGVTVSKDNIENMVSTELN 118 Query: 108 QHARNTGLSAEDFSSFLDKQG-IGDNHFKQYLAIQSIWPD---VVKNDFMLKYGNLEMEI 163 + G++ D +L + G N FK L +++ E E Sbjct: 119 KTLTQYGMTESDLDWYLKQAGLGDINSFKDRLRWIFTVQQTVSLIQQQVTSSATVTEEEA 178 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 ++ + E + + ++ + ++ E + + Sbjct: 179 RQFYEQNREYFAVEEAAKLLRITVDSKEKADKA---------LERIRAGEEFSQVASDVS 229 Query: 224 SKI-HDVSIGKAQYLLESD--LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDL- 278 + G ++ + + + + + P T G E I DKR Sbjct: 230 TDPLSKGKAGDLGWVERGSGLISEEIEEKIFVSPKGAILGPLQTSVGWEIYRIIDKRPKG 289 Query: 279 -GGEIALKAYLSAQNTPTKIEKHEAEYVKK----LRSNAIIHYY 317 + + K ++ ++ + +++++I+ Y Sbjct: 290 YENFEDVVNDIYQHLIQQKAQQLWQTWINEQFIPFKNSSVINIY 333 >gi|326790776|ref|YP_004308597.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium lentocellum DSM 5427] gi|326541540|gb|ADZ83399.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium lentocellum DSM 5427] Length = 330 Score = 92.4 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 42/334 (12%), Positives = 96/334 (28%), Gaps = 43/334 (12%) Query: 13 IKLLTTYFVLIIFCIVPIV----------SYKSWAMSSRIRTTINGEVITDGDISKRIAL 62 +KLL VL++ ++ S + + T+ +T + +++ Sbjct: 1 MKLLKKGIVLLMVGLLGFGVVGCSKVADNSQTNNKTEDVVIATVGDGKVTKKALDQQLVY 60 Query: 63 LKLQKI----------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 L E +++ V L+ L + ++ + ++ V+ Sbjct: 61 LDSLMQWQYGEDYESNEEAMNYYNEQKRLMVDYLVEIQLIISKAQEYDVNVTADDVDEEL 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + + F L G+ KQ L I VV + EI Sbjct: 121 ELLKSDY-DTEAAFEEALTTSGMSLEELKQMLKEDLIVNQVVTAS-TKDITVSDEEIKTY 178 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + E ++ K+ + + + E++ + Sbjct: 179 YDGNIDSFKTEAGATMSHIL---------VATEEEAKEIKAKYDKGTSFEDLAEEYGTDA 229 Query: 227 HDVSIGKAQYLLESD---LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK---RDLGG 280 G +Y+ + + + + + P TQ G I + D + Sbjct: 230 TKSQGGLLEYIPYNSTKYDADFLASAKQLDEGEVSEPVKTQNGWHLIKVTDVNKEERIKS 289 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +K + Q K + + VK+ + + I Sbjct: 290 YDEVKDEIKEQLLIQKQNEVVEKKVKEWKESTNI 323 >gi|326336412|ref|ZP_08202582.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691285|gb|EGD33254.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 461 Score = 92.4 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 35/326 (10%), Positives = 93/326 (28%), Gaps = 12/326 (3%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + I L T F+ CI + + S + + +I + DI + + Sbjct: 3 LKRNNLKSMNRINYLGTLFLSFFLCIPCLWAQSSKTKIDGVAAVVGDYLILETDIDRALI 62 Query: 62 LLKLQK--INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 L+ Q + +L+ + L + + I + + D Sbjct: 63 ELRSQNVDTKNVTRCQLLGKLMEDKLYVNQAIQDSIKVSDTDIRDGVNRRIEFLTDQLGD 122 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDV----VKNDFMLKYGNLEMEIPANKQKMKNITV 175 + D + + + +K + E+ K+ + Sbjct: 123 IQKVIQFYHKDDEQSLRDELFDILRQNELSSRMKAKIVENIEVTPEEVKQFFNKIPKDEL 182 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL---EKFASKIHDVSIG 232 + I Q V K I+ +E + + ++ S Sbjct: 183 PTIGTELEIAQIVIEPKAPQSEVNKVIEQLKEIKKDVQENGASFPTKAILYSADRATGGK 242 Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 + + +S +F+++ + ++P+ T G + + R + + Sbjct: 243 ELTFNRKSSFAKEFKDVAFSLQEGEISDPFKTDFGWHILQVVKIRGKEVSVRHILMVPQI 302 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + + + +R+ I + Sbjct: 303 PQNSL--EEAKKKINDIRNKIINKEF 326 Score = 37.3 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 23/289 (7%), Positives = 72/289 (24%), Gaps = 23/289 (7%) Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + +T ++ + + EL I + I + + + + +S + + Sbjct: 159 IVENIEVTPEEVKQFFNKI----PKDELPTIGTELEIAQIVIEPKAPQSEVNKVIEQLKE 214 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI--WPDVVKNDFMLKYGNLEME 162 N + + G + DV + + + Sbjct: 215 IKKDVQENGASFPTKAILYSADRATGGKELTFNRKSSFAKEFKDVAFSLQEGEISDPFKT 274 Query: 163 IPANKQKMKNIT-VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 +E +R +L + + +K + + + Sbjct: 275 DFGWHILQVVKIRGKEVSVRHILMVPQIPQNSLEEAKKKINDIRNKIINKEFTFAEAAKN 334 Query: 222 FAS-KIHDVSIGKA-------QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKG-----V 267 F+ K G+ + + P + + + ++P + + Sbjct: 335 FSDEKETKEDGGQLLNPENYSTKFELTRMEPLLYSQVSSLKDDEISSPIMDEDRTGRKMY 394 Query: 268 EYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + I ++ I + K + +++ + I Sbjct: 395 KIYRITNRIGEHTADFINDYTRIRDLALKEKQLEAVGKWMNEAIKKTFI 443 >gi|302871263|ref|YP_003839899.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor obsidiansis OB47] gi|302574122|gb|ADL41913.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor obsidiansis OB47] Length = 335 Score = 92.4 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 37/318 (11%), Positives = 94/318 (29%), Gaps = 20/318 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI----- 60 + T VL+I I + +R +NGE IT + + Sbjct: 1 MDKRTKIAIFFITAIVLLIIVIAVTPEMVKYVDENRAVAIVNGEKITKKEFAINYRSQIN 60 Query: 61 ----------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 + + ++++ + LIV ++ Q+ K IT S Q Sbjct: 61 YYGLDKAFLSQKVGDKTYEQQIKENVLDGLIVRQIELQQARKRNITLTSTEKKAIDQQIE 120 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + S + + Q I +V + + + + Sbjct: 121 QYKSDSQSGAEF--KQYLQTIGATENEYKDQVIKSQIVSKLYDEVTKSQKASDAEIESYY 178 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDV 229 + ++ N + + +++ ++ + +K++ Sbjct: 179 NSHKSDFVEVKASHILFKVNDSKEEAAKKRKAEEVLQMIKSGQSFEKLAQKYSEDETTKQ 238 Query: 230 SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 G Y + + +F++ + ++ T G I + D++ L +K + Sbjct: 239 KSGDLGYFRKGQMVKEFEDAAFSLNIGEISSVVKTSYGFHIIKVTDRKQLSLNE-VKDEI 297 Query: 289 SAQNTPTKIEKHEAEYVK 306 + K +++ V+ Sbjct: 298 KSTIESQKKDEYYQSLVE 315 >gi|225873725|ref|YP_002755184.1| peptidyl-prolyl cis-trans isomerase, PpiC type [Acidobacterium capsulatum ATCC 51196] gi|225793223|gb|ACO33313.1| peptidyl-prolyl cis-trans isomerase, PpiC type [Acidobacterium capsulatum ATCC 51196] Length = 372 Score = 92.4 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 99/324 (30%), Gaps = 39/324 (12%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI-------AVQELIVE 83 +S + A + + T+NG+ I + ++ + + LI E Sbjct: 40 ISGCNRAHKADVLATVNGKPIMKSQVDLLYEANVGKQPEKPTKVQGDIVRLNILSRLINE 99 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + Q K + + V + + ++F L +Q + + KQ + Q Sbjct: 100 EILMQRAAKMNLVASNEDVESRLNEIKA--PFTPDEFQKQLAQQHLTLDALKQQIRNQLT 157 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ---------- 193 + + K + +I A K + + N + Sbjct: 158 EQKLFNKEINSKIDVTDDQITAYYNAHKAEFNLPQPQFHLAQILVTNIPENAKNSGNLQN 217 Query: 194 ----NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL---HPQ 245 N +++I+ ++ F+ + + G ++ + +L Sbjct: 218 SKAMNDAEAKRKIQMLDDRLKNGDDFGTLASNFSENPQNSSNGGDMGFISQQELQSDPDV 277 Query: 246 FQNLLKKSQNNTTNPY---VTQK-----GVEYIAICDKRDLG----GEIALKAYLSAQNT 293 + + K S T TQ G + DK G + ++ + + Sbjct: 278 WGAVSKLSPGEITPVLPVYATQDHKKVIGYAIYKLLDKEGAGQLELSDPRVQQSIRQRLH 337 Query: 294 PTKIEKHEAEYVKKLRSNAIIHYY 317 ++ + + Y++ LR A + Y Sbjct: 338 ESRSQLMQNAYLEMLRDQAHVVNY 361 >gi|296879875|ref|ZP_06903848.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP07] gi|296429164|gb|EFH15038.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP07] Length = 321 Score = 92.4 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 37/316 (11%), Positives = 93/316 (29%), Gaps = 32/316 (10%) Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI----------------- 68 I+ + + T+ G I+ + K IAL K Sbjct: 1 MILVVSVTACNSSKGETVATVEGTKISSDEFKKTIALYKDSMEQTYGKDIWDKEVEKGVK 60 Query: 69 -NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 + + + + +LI + + +K + V F + G + Sbjct: 61 YKDKFKDLILDQLITTEVIYSQAKKDNLLPKKEDVEKSFKELKDAMGKDEKYKEQLKKLG 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + Q + +++F K + E+ K+ ++ + + + Sbjct: 121 IDDEFLRDQQEKD--LAMQNYQSNFTKKTKISDEEMKKYYDTHKDEFKKDEVEASHILLK 178 Query: 188 PDNKLQNQ------GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + +K+ ++A + +K++ GK + Sbjct: 179 TVDDNNKPLSAKEKAEAKKKAEEALKEVKSGEDFAKVAKKYSQDASASDGGKLGFFSRGQ 238 Query: 242 LHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK-RDLGGEIALKAYLSAQNTPTKIEK 299 + +F++ + ++ TQ G I + D+ + K + Q K ++ Sbjct: 239 MVAEFEDAAFSMKKGEVSDLVETQYGYHIIKVTDRINEQTSFEDAKETIKDQLLKNKYQE 298 Query: 300 HEAEYVKKLRSNAIIH 315 ++KL A + Sbjct: 299 Q----IEKLTKEAKVE 310 >gi|239826178|ref|YP_002948802.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp. WCH70] gi|259534743|sp|C5D6L9|PRSA_GEOSW RecName: Full=Foldase protein prsA; Flags: Precursor gi|239806471|gb|ACS23536.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp. WCH70] Length = 276 Score = 92.4 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 93/304 (30%), Gaps = 41/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + ++ V +S + S I T +G IT + + + K Sbjct: 1 MRKWMIVAAVAAVFGLSACNNGDSEVIVKTKDGN-ITKEEFYNEMK--------ARVGKE 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 +++L+ E + ++ + + D N + + + ++ Sbjct: 52 VIRDLVHEKVLSKKYKVTDKEIDKEIENLKEMYGTQYDLVVQQNGEKA------------ 99 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + M + E+ + K +++ Sbjct: 100 --IRDMVKLDLLRQKAAMEDIKVTDKELKDYYKNYKPKIRASHIL--------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 +K ++ + + ++++ + G + + +F++ K Sbjct: 143 VKDEKTAEEIKTKLDKGEDFAKLAKQYSQDPGSAPNGGDLGWFGPGKMVKEFEDAAYKLK 202 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE-KHEAEYVKKLRSNA 312 ++P T G I + DK + +K + + +K++ V+KL +A Sbjct: 203 VGQVSDPVKTDYGYHIIKVTDKEEKKPFNEMKEEIEFEVKQSKLDPAKVQSKVEKLIKDA 262 Query: 313 IIHY 316 + Sbjct: 263 KVEI 266 >gi|149926466|ref|ZP_01914727.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Limnobacter sp. MED105] gi|149824829|gb|EDM84043.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Limnobacter sp. MED105] Length = 260 Score = 92.4 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 84/306 (27%), Gaps = 51/306 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG--DISKRIALLKLQKINGEL 72 +L T V ++ A + +NG+ I D + Q + E+ Sbjct: 1 MLKTTLKATCLAAVLVLGTPVHAQN---AAVVNGQSIPSALVDFIMAEQEKRGQAASPEM 57 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 QELI + + KQE K G+ Sbjct: 58 RATIRQELINQEVMKQEAVKKGLGSSPEVKYQV--------------------------- 90 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + Q+I + ++ DF + E+ ++ + + + Sbjct: 91 ----QMMNQAILANALREDFYKNTKLTDKEVETAYAEIAKMMGGSEFRASHILV------ 140 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 + K + + K + + + + G + + P+F + Sbjct: 141 ----EQEAEAKAIIDQLGKGGKFADIAKAKSKDPGSAPNGGDLDWANPNSFVPEFSQAMV 196 Query: 252 K-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + T P +Q G I + D R + Q I EY KL Sbjct: 197 GLKKGEYTKTPVKSQFGYHVILLADTRQATP--PKLEEIRPQLEQKMINDKWEEYQGKLL 254 Query: 310 SNAIIH 315 S A + Sbjct: 255 SGAKVK 260 >gi|238898000|ref|YP_002923680.1| PPIC-type peptidyl-prolyl cis-trans isomerase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465758|gb|ACQ67532.1| PPIC-type peptidyl-prolyl cis-trans isomerase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 624 Score = 92.4 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 47/400 (11%), Positives = 106/400 (26%), Gaps = 88/400 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M TS + + +F+++ F + SY + +NGE I+ + + + Sbjct: 1 MMEYFRTSTKNLTLKIILFFIVLSFIAGGLGSYFIGRATDY-VAKVNGEKISRAQLEQAL 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +L K + +LI + L Q G+ D V Sbjct: 60 QNERHRLKQQLGEHFLALADNKDYMQQLRKKVIDQLINQILIVQYTHHLGLKIDDEHVKD 119 Query: 105 FFV---QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + + + + + G + F + Q I +++ Sbjct: 120 TIRKMSYFQTDNQFDNKKYLNLISNMGYTPDEFAELQRQQLINDQLLQIFGNSEFVLPNE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N F + + EI K KN ++ + Sbjct: 180 IKRISALLLQKRHVRLATLNLNTFQNRQKVTDEEIKDYYDKNKNTFTNPEQVKVSFIIMD 239 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA------------------------- 223 ++N+ V K + +L+ ++ Sbjct: 240 AESMENKITVNKSEIKDFYEQHSAEFIQPELKNYSVIQLKTKKEADTTLDKLKKGALFSD 299 Query: 224 -------SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 I G+ +L + + + + + G + D + Sbjct: 300 LAKNKSIDSISRKKGGQLGWLEPDTTVDEIKQANLTEKGQLSGVIESSTGYFIFRLNDIK 359 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + ++ L + K + KK+ S A+I Sbjct: 360 PSYVKPLSIVRNQLIEKIKQEKAIQAYYVLQKKV-SEAMI 398 >gi|332141940|ref|YP_004427678.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Alteromonas macleodii str. 'Deep ecotype'] gi|327551962|gb|AEA98680.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Alteromonas macleodii str. 'Deep ecotype'] Length = 630 Score = 92.4 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 49/408 (12%), Positives = 103/408 (25%), Gaps = 96/408 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ + +++ F + SY + + T+NGE I+ ++ + Sbjct: 1 MLERIREGSQGPWAMAIIALIVLSFVFAGVGSYL-TSNGTTAVATVNGEEISAQELERAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + Q + + K + LI E L +Q+ G+ + Sbjct: 60 QNQRAQMESQYGESIAQLFSSEQYLADFRKNVLDRLIAEKLIQQQATNMGLRVSDEQIRE 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 VQ E F + L + G F+ YL Q + Sbjct: 120 TIVQMPEFQFGGQFDNERFQAILRQNGFQVADFRDYLRTQMTQNQLAAALTNSSFALDGE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRT------ 182 +F + +I A E ++ Sbjct: 180 VEQANALQRQTRNAKYVLVSSDEFADSIEVTDADIEAFYNNNIASFDTEEQVKLAYVKLS 239 Query: 183 -------------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + + DN L + G ++R D K + + K Sbjct: 240 VEDLKGRVSVDEDAVRTYYDNNLGSYGTEEQRRVSHILIEAGDDADAAKAKAESLKAEID 299 Query: 230 SI--------------------GKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGV 267 S G ++ + P F ++ + ++ T+ G Sbjct: 300 SGADFAALAEANSDDTFSAENGGDLDFITPEMMDPAFDEAAFSLENVGDVSDVVETEFGY 359 Query: 268 EYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 I + + ++ + + + E L A Sbjct: 360 HVIKLTEVKEAQVKTFDEVAGEIRDTLLYDAAMEKYFELQNTLAEIAF 407 >gi|163856017|ref|YP_001630315.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella petrii DSM 12804] gi|163259745|emb|CAP42046.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella petrii] Length = 258 Score = 92.4 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 86/278 (30%), Gaps = 46/278 (16%) Query: 43 RTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 T+NG+ I+ + + + LL Q +L + QE+I + Q EK G+ ++ Sbjct: 22 VATVNGKAISQQSLDQFVKLLVSQGATDTPQLREQVKQEMINRQIFVQAAEKDGVAKQAD 81 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 LA Q I + D++ K+ + Sbjct: 82 VQTEI-------------------------------ELARQGILVRALMADYLAKHPVTD 110 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +I A K K + + + D K N Q + K + + Sbjct: 111 QQIQAEYDKAKQQQAGQMEYKVRHILVEDEKTANDLLAQIKGNK--------SKFADLAK 162 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRD 277 + + G + ++ F + + + P TQ G I + D R Sbjct: 163 QNSKDPGSAAKGGDLGWASPTNYVKPFADTVSSLKKGQLADKPVQTQFGWHIIEVEDTRP 222 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + E + Q ++ Y K+LR A I Sbjct: 223 V--EFPPLDQVRPQLEEMLRQQTLTAYQKELREKATIK 258 >gi|153952806|ref|YP_001393571.1| peptidylprolyl isomerase [Clostridium kluyveri DSM 555] gi|219853471|ref|YP_002470593.1| hypothetical protein CKR_0128 [Clostridium kluyveri NBRC 12016] gi|189037913|sp|A5N4J2|PRSA_CLOK5 RecName: Full=Foldase protein prsA; Flags: Precursor gi|254783411|sp|B9DY54|PRSA_CLOK1 RecName: Full=Foldase protein prsA; Flags: Precursor gi|146345687|gb|EDK32223.1| PrsA [Clostridium kluyveri DSM 555] gi|219567195|dbj|BAH05179.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 341 Score = 92.4 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 37/330 (11%), Positives = 91/330 (27%), Gaps = 40/330 (12%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL---- 72 + ++ A++ +NGE IT D+ K ++L + Sbjct: 12 LIAVFIFSVTGCNMIEKTPEAIAKSTVAEVNGEKITRSDLDKDPNTIQLITQVKQQYGEN 71 Query: 73 --------------EKIAVQELIV-----ETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 ++ + +LI + K+ ++ S+ +N Sbjct: 72 YKENEDAVNTIKTQKEQILDDLITNKVVAQKAKELKLLPDETKLKSDMETQIAQLKKQNF 131 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---FMLKYGNLEMEIPANKQKM 170 AE F++ L QG + FK Q ++ + EI Sbjct: 132 NDDAEQFNTALKAQGFTEESFKAMFLSQLRTQQTLEKVTESISKNIKITDKEIEDYYNTN 191 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDV 229 K+ + + + + + + ++ ++ + Sbjct: 192 KSKYTEQPNKMHLAHILVKTEDEAKKVKKR--------LDDGEDFAKVAKEVSQDTASKD 243 Query: 230 SIGKAQYLL---ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IAL 284 + G + L + + P + G I K + + A+ Sbjct: 244 NGGDLGTVNYDNSGYDADFMAGALALKEGAISAPVKSSFGYHIIKCIKKEEYPVKALSAV 303 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + Q K ++ +++ + + I Sbjct: 304 KDQIKTQLESDKKNSLVSQKIQEWKKASTI 333 >gi|147676453|ref|YP_001210668.1| parvulin-like peptidyl-prolyl isomerase [Pelotomaculum thermopropionicum SI] gi|146272550|dbj|BAF58299.1| parvulin-like peptidyl-prolyl isomerase [Pelotomaculum thermopropionicum SI] Length = 324 Score = 92.4 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 38/320 (11%), Positives = 88/320 (27%), Gaps = 36/320 (11%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------- 70 F+ +V + + SR T+NGE IT G++S+R+ +K Sbjct: 8 FIAAAVFLVIVAVLSGCS--SRAVATVNGEKITAGELSQRLEEIKSNLEKQGFDFSGDKG 65 Query: 71 -----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 L + ++++I L QE +K G V + E Sbjct: 66 KAFMESLRQETLEQMINTRLMLQEAKKLG-PLTPEQVQEIIKPLKEQFSSAEEYQDFLAQ 124 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + + + + E +I + R ++ Sbjct: 125 IKMSEEEAAYILN--------LQEQVTGDVAPPAEADIKKYYDEHLEEFSRPEQLQVRHI 176 Query: 186 SIPDN-------KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 + ++ ++A + + + G Sbjct: 177 LFFVDGGDKGYPVQHTDAEAREMAEEAIAQLKAGKDFAELAREKSEDSGTRADGGLYTFS 236 Query: 239 ESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTP 294 + +F + T +P T+ G I + K ++ ++ Sbjct: 237 RDEAVKEFADAAYALKVGEYTADPVKTEYGYHIIKLEKKIPARQDPFEEVRQDIAGLLLE 296 Query: 295 TKIEKHEAEYVKKLRSNAII 314 ++ E++++ + A I Sbjct: 297 QARQEKFGEFMQQAKDRAEI 316 >gi|145628832|ref|ZP_01784632.1| thymidylate kinase [Haemophilus influenzae 22.1-21] gi|144979302|gb|EDJ88988.1| thymidylate kinase [Haemophilus influenzae 22.1-21] Length = 246 Score = 92.4 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 86/244 (35%), Gaps = 12/244 (4%) Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 ++ +++SG+ D +++ A GL+ F LD QGI N F+Q +A Q + Sbjct: 1 MQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNTFRQQIANQMVMG 60 Query: 146 DVVKNDFMLKYGNLEMEI---------PANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 V G E+ A ++ + + + + L + Sbjct: 61 AVRNKAIQESIGVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHILLKLNPLLNDAQ 120 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY-LLESDLHPQFQNLLKKSQ 254 ++ K + + K++ + G Y E+ Q ++K Q Sbjct: 121 AKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPETYAPQFAQTVVKSKQ 180 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKKLRSNAI 313 + P+ T+ G + + RD + T+++ ++VK LR A Sbjct: 181 GVISAPFKTEFGWHILEVTGVRDGDLTAEAYTQKAYERLVNTQLQDATNDWVKALRKRAN 240 Query: 314 IHYY 317 I Y+ Sbjct: 241 IQYF 244 >gi|312142429|ref|YP_003993875.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halanaerobium sp. 'sapolanicus'] gi|311903080|gb|ADQ13521.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halanaerobium sp. 'sapolanicus'] Length = 340 Score = 92.0 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 87/337 (25%), Gaps = 35/337 (10%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAM------SSRIRTTINGEVITDGDIS-----KR 59 FIK + IIF + + + + +NGE I+ ++ Sbjct: 2 IFIKKVFV-LTAIIFLVFSMSAMAQNIENTMSLDQTGPAAVVNGEEISRQELEGFAALNE 60 Query: 60 IALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 I + LQ E + + +LI L QE + G+ +N Sbjct: 61 ILMDILQSNQEFGTVLLQTESGQELIEEFMRYKLDQLISTKLMVQEAKNRGLEVSDQEIN 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 Q L+ + + + F+ K E Sbjct: 121 QIIDQQIAGIKQQNNLNDQQLEMALQQEGFASLDEYKSLLIESNMDRFFIEKLRTDITEE 180 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 E + + + K ++ ++ + Sbjct: 181 ITISDAEVEEFYNENQAQFAIPAEYRISHILFNEADKA-EEVLTQIESGADFAEMAKEHS 239 Query: 224 SKIHDVSIGKAQYLLESD---LHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLG 279 + G ++ D + + P TQ G I I D RD Sbjct: 240 IGPTAENGGDLGFIAADDRGIDAVFLNAAKELEVGQVSESPVETQFGFHIIKITDYRDGS 299 Query: 280 G--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +K L + + + E++ LR +A I Sbjct: 300 SREFAEIKDELKEEMLSQRANQLWNEFIIGLREDAEI 336 >gi|323490390|ref|ZP_08095605.1| foldase protein PrsA [Planococcus donghaensis MPA1U2] gi|323396060|gb|EGA88891.1| foldase protein PrsA [Planococcus donghaensis MPA1U2] Length = 288 Score = 92.0 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 25/304 (8%), Positives = 76/304 (25%), Gaps = 26/304 (8%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + ++ I + + + + IT + +++ Sbjct: 1 MKKMIYISIGVLAATAIFILAAFNGDETVAKVGDKEITKEALYEKLVATSGAAT------ 54 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + +I + QE EK+ + ++ + G + + Sbjct: 55 --LDAMISNEVVNQEAEKAEVEVTQEEIDAEMAVYEEQYGGAEGLEQALASS-----GMS 107 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 L + V+ + +I ++ K + + Sbjct: 108 IADLEEEMKTYLKVEKIIGPDIEITDEQISTYFEENKETFAQASKVEANHIL-------- 159 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK- 252 Q+ + + +++ + G ++ P+F+ Sbjct: 160 -VETQEEADEVKAKLDDGDDFAELAAEYSVDTSNAEDGGALGEFGAGEMTPEFEEAAFSL 218 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + ++P T G I + K + K + + A ++ + Sbjct: 219 KVDEISDPVETDYGFHIIQVTGKTEATEANLEDSKEQIKETLFDEALNTQYAAWLAEKTE 278 Query: 311 NAII 314 + I Sbjct: 279 SYNI 282 >gi|239780227|gb|ACS15392.1| PpiC-type peptidyl-prolyl cis-trans isomerase [uncultured bacterium FLS12] Length = 306 Score = 92.0 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 28/293 (9%), Positives = 90/293 (30%), Gaps = 19/293 (6%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQ-----------KINGELEKIAVQELIVETLKK 87 + + +NGE + + I ++ K ++ +A ++ L Sbjct: 15 ENAMALVVNGERVEEARIENEARQIEANPELAVDEQDPDKRKEAVQAMAKDHVVTGVLIN 74 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 QE+ + ++ + + F A+ + + K+ L ++ + Sbjct: 75 QEVARRHMSIPPHELEAAFEAVAQQQDAKDKPPEQ-GGWDENQADAVKKNLEMRMKIDRL 133 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + E ++ A ++ K+ ++ + D + ++ +KD Sbjct: 134 LDEVCRDVPEPTEEDVLACYEESKDRFAVPEMIHAAHIVKHVQDGNIMDRQAAYNEMKDI 193 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 + + + S G + +F++++ + + + Sbjct: 194 ANEIDKGATFEELAARHSDCPD--SGGDLGVFPRGQMVQEFEDVVFALEVGQVSGIFSSC 251 Query: 265 KGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 G+ + ++R + + +V +L+++A+I Sbjct: 252 FGLHIAKLYERRPRVDKSFDEVADEVRKACATELENTRIDAFVDELKASAVIE 304 >gi|297182861|gb|ADI19012.1| parvulin-like peptidyl-prolyl isomerase [uncultured alpha proteobacterium HF0070_05I22] Length = 296 Score = 92.0 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 80/309 (25%), Gaps = 42/309 (13%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 L + +T +F V + S + A T+NG+ I D+ L + Sbjct: 12 LKVRFERITRHFGYGTLAAVCLASTIAQANEQISVGTVNGKDIWLDDVLHAAERLPQEFQ 71 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 LE +L+ + + + A + Q Sbjct: 72 QTPLENY-FSQLVADII-----------------DSQLAATAARFDAYDKKPEVAAAMQ- 112 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 A + + + + ++ +K + + +L Sbjct: 113 --------LAANRVLAESWLAEKVRAEITETAIQSAYDKFVADTASREQVTASHIL---- 160 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 + K ++ ++ + G + P F+ Sbjct: 161 -------VETEAEAKAVIAVLQDGGDFAELAKEKSTGPSGPNGGALGTFGRGQMVPAFET 213 Query: 249 LLKK-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 + + ++ P TQ G I + K + AQ + ++ Sbjct: 214 AAFSLTIGSYSDTPVQTQFGWHVIKVDGKDITPA--PDLEAMRAQLANNLSTQTLGRLLE 271 Query: 307 KLRSNAIIH 315 +LR++ I Sbjct: 272 ELRASQDIQ 280 >gi|222100637|ref|YP_002535205.1| Basic membrane protein [Thermotoga neapolitana DSM 4359] gi|221573027|gb|ACM23839.1| Basic membrane protein [Thermotoga neapolitana DSM 4359] Length = 329 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 43/333 (12%), Positives = 100/333 (30%), Gaps = 43/333 (12%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL--- 72 + F++I+ ++ SS + +NG+ IT + + + K ++ Sbjct: 1 MKKVFLVILLVTTATFFSQATTTSSTVVAIVNGQPITSDLLELEADINGILKSIAQIDMR 60 Query: 73 ------------------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR--- 111 + + LI + L +Q EK G+ VN + + Sbjct: 61 FFNVLTGTEEGLRLLLKYKMEVLNSLIDDLLIQQLAEKEGVGVTDEEVNAEVEKRLKETV 120 Query: 112 -NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + G++ ED FL G GD + + + K Q Sbjct: 121 ESMGITLEDLDKFLQSAGYGDLETFKKRLKWHLKTQLSLQRLQEKITQDATVTVEEAQNY 180 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 N Y + + + + + + K A + Sbjct: 181 YNQNKEAYRVPAAVHLYRISAEEKGKIDEA-----LSRIRKGEDFLEVATKVA------T 229 Query: 231 IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAY 287 G ++ E +L ++ + + + P+ ++ G + +KR +K Sbjct: 230 GGDLGWIEEGELEKDLESVIFEAPEGAILGPFESKGGFMLYKVVEKRASSYKKFEEVKEE 289 Query: 288 LSAQNTPTKIEKHEAEY----VKKLRSNAIIHY 316 + + K + ++ ++ + N+ I Sbjct: 290 IINKLLSEKKAQIWNDWFNKTFEEFKKNSHIEI 322 >gi|255321569|ref|ZP_05362727.1| trimethylamiNe-N-oxide reductase 1 [Campylobacter showae RM3277] gi|255301425|gb|EET80684.1| trimethylamiNe-N-oxide reductase 1 [Campylobacter showae RM3277] Length = 270 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 81/280 (28%), Gaps = 40/280 (14%) Query: 44 TTINGEVITDGDISKRIALLK---LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 T+NG ITD D++ +A + L+++ + +K + E I L E +KSG+ Sbjct: 23 ATVNGTAITDKDVAFTLAAMPGVTLEQLPKDTQKKVIDETINRKLLLDEAKKSGLDKSDE 82 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 ++ D+ E Sbjct: 83 YKAAL-------------------------------EELKNNLALDLWMKRIFDNIKVSE 111 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 EI K K +R + K N + +E + + Sbjct: 112 GEISDFYNKNKAEFAVPAQVRAKHILVATEKDANDIIAALKGLKGDELVKKFEELAK--S 169 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRDL 278 K + + G+ + +S + F + + T P + G I D + Sbjct: 170 KSTDQGSAANGGELGWFGQSQMVKPFADAAFALKKGEVTQKPVKSNFGYHVILKEDSKAA 229 Query: 279 GG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G +K + K + +LRS A + Y Sbjct: 230 GTVGLNEVKPQIEGNIKMEKFRNDIRKRGDELRSKAKVEY 269 >gi|293603516|ref|ZP_06685937.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC 43553] gi|292817952|gb|EFF77012.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC 43553] Length = 160 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 13/140 (9%), Positives = 45/140 (32%), Gaps = 2/140 (1%) Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + + ++ Q+ + + K + +++ G+ + Sbjct: 6 MQTRARHILIKTSTVMSDETARQRLEQVRQRLVSGGAKFEDMARQYSQDATAPQGGELGW 65 Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD-LGGEIALKAYLSAQNTP 294 L + P F+ + + P + G I + ++R + + Sbjct: 66 LNPGETVPPFEAAMNALKPGEISPPIQSPFGWHLIQVEERRQHDATDDLARMKARQILFE 125 Query: 295 TKIEKHEAEYVKKLRSNAII 314 + + +++++LR+ A + Sbjct: 126 RRAQPAFEDWLEQLRAQAYV 145 >gi|182626803|ref|ZP_02954541.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium perfringens D str. JGS1721] gi|177907849|gb|EDT70447.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium perfringens D str. JGS1721] Length = 248 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 80/285 (28%), Gaps = 46/285 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQELIVETLKKQEIEKS 93 M ++ T+ IT I + IA Q+ + E ++ +++ I E K Sbjct: 1 MEKKVLATVGNTEITSDYIDEIIARYPAQQQAMLASDEGKRQVLEQAIA-FELMSEFAKE 59 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + + A+ + +V + Sbjct: 60 TGLDKTEEFKDQLNKFAKE------------------------------LLAQMVMKKTL 89 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E A Q+ K V + + ++ K EE Sbjct: 90 SSVTVTDDEAKAFYQEHKENFVELETVTAKHILV--------ASEEEAKKVEEEIASGSI 141 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 + K++S G + + P+F+ + P TQ G I + Sbjct: 142 TFEDAANKYSSCPSKEQGGNLGSFSKGMMVPEFEEAAFNLELGVVSAPVKTQFGYHLIKV 201 Query: 273 CDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 DK + +K + + +K E +K+LR + Sbjct: 202 EDKTEAKTKAFEDVKEQVVNMLIQERQQKKYLELIKELREKYGVK 246 >gi|332530714|ref|ZP_08406644.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hylemonella gracilis ATCC 19624] gi|332039835|gb|EGI76231.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hylemonella gracilis ATCC 19624] Length = 266 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 38/277 (13%), Positives = 73/277 (26%), Gaps = 47/277 (16%) Query: 43 RTTINGEVITDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 +NG+ I + L+ Q E+ + Q +I L QE + G+ Sbjct: 33 LAVVNGKPIPTARVDALARQVLRGQPPTPEIMEELKQAVIDRELLAQEARRQGLAATPEY 92 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 + ++V Sbjct: 93 RAQIEFAQES------------------------------LLIRELVARFQQTNPVTDAD 122 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 ++ + +EY R +L ++K K ++ Sbjct: 123 FQEGYQRFVAANGGKEYHARHILVPTEAEAQALLAQLKK-----------GAKFDALAKQ 171 Query: 222 FASKI-HDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTN-PYVTQKGVEYIAICDKRDL 278 + G + P+F L+ + T+ P TQ G + + D RD+ Sbjct: 172 HSKDPGSAARGGDLDWAPAQGYVPEFAAALQALGKGQTSEAPVQTQFGWHLLQVEDVRDI 231 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + Q ++ E+ K LR+ A I Sbjct: 232 QL--PSLNDVKPQLAQEIGQRKFEEFQKDLRAKAKIK 266 >gi|295676529|ref|YP_003605053.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1002] gi|295436372|gb|ADG15542.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1002] Length = 259 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 80/278 (28%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I I L + Q+ +L++ +EL+ + QE + G+ + Sbjct: 25 IAVVNGTPIPKSRADALIQQLVHQGQQDTPQLQQAVREELVNREILMQEALRRGLPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + DF+ + Sbjct: 85 IKAQI-------------------------------AVAQQTVVLRALIEDFVKNNQPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A + + + + + ++ K + Sbjct: 114 AEVTARYNALVKDAGGKEFHLHHILVDNEQQAKDLIAKIKA----------GASFEDLAR 163 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F + + T+ P TQ G I + D R Sbjct: 164 QYSKDPGSGKNGGDLDWSDPKAYVPEFADAAAHLQKGQMTDTPVHTQFGWHIIRVDDIRA 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + AQ ++ + + LR NA I Sbjct: 224 VTP--PPLEQVRAQIVQQIQQEKLQAFEENLRKNAKIQ 259 >gi|209515375|ref|ZP_03264241.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. H160] gi|209504095|gb|EEA04085.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. H160] Length = 295 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 29/286 (10%), Positives = 74/286 (25%), Gaps = 43/286 (15%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91 S S ++ T+N VI+ +++ + ++ + V L ++ L Q Sbjct: 46 SATSSKEATDAALTVNDTVISQREMAMLVHQQPVRDEQPNSRQKIVDNLTMQILAAQAAT 105 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 + G+ + + +K+ Sbjct: 106 QKGLDKSPEVQDQ------------------------------MDMSKTSILAQAYIKDF 135 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 F + EY R ++ D + + Sbjct: 136 FASHKPTDAQLNAEYDKVKAAAAGNEYRARHIVVKSEDEAKAIIAKLNQDP--------- 186 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTT-NPYVTQKGVE 268 + G + + + P+F + ++K + + P +Q G Sbjct: 187 -KAFSELASADSLDPVSKAKGGDLGWFDPARMVPEFASAVQKLGKGQISQEPIKSQFGYH 245 Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I + D R + + ++ + + +++ A I Sbjct: 246 VIVVDDIRSKADSVPPFEQVKDSLAAHFEQEELLKALSDMKAQAKI 291 >gi|110799431|ref|YP_697171.1| peptidylprolyl isomerase [Clostridium perfringens ATCC 13124] gi|123049564|sp|Q0TMG9|PRSA_CLOP1 RecName: Full=Foldase protein prsA; Flags: Precursor gi|110674078|gb|ABG83065.1| putative foldase protein PrsA [Clostridium perfringens ATCC 13124] Length = 342 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 39/331 (11%), Positives = 91/331 (27%), Gaps = 20/331 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 S+ + ++ +V A+ T+NGE IT G++ + + Sbjct: 1 MVSVKKIVASALVGVLMFSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFA 60 Query: 66 QKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 Q + + + VQ L+ + + E +K GI + + Sbjct: 61 QMKSQYGDKYMDDPQVAQQILQQRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQ 120 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 N D + + + + V++ + + + + Sbjct: 121 FENIKKGMGDNFDKALEAEGYTEDTFKDVIKNQVINQAVQDYIIKDVKVTDEDAQKYYDE 180 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 K V + + +N+ + Q + K N + K Sbjct: 181 NKQQFVAKDSGVLTKHLLFENEEEAQKAYDEIQSGKTTFNDLFTKYENNKSEN-KKPIAE 239 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI---CDKRDLGGEIALKA 286 ++G + L + + P TQ G I +K +K+ Sbjct: 240 NLGVVPAENSGLVQEFVDGLKPLKEGEISKPIKTQFGYHIIQAGATYEKGAQLPFDDVKS 299 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + K + + + + + + Y Sbjct: 300 QIIQILKQQKDSEKFKADMDQWKKDLNVKVY 330 >gi|154148403|ref|YP_001406775.1| foldase protein PrsA [Campylobacter hominis ATCC BAA-381] gi|153804412|gb|ABS51419.1| foldase protein PrsA [Campylobacter hominis ATCC BAA-381] Length = 271 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 93/300 (31%), Gaps = 41/300 (13%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK----LQKINGELEKIAVQEL 80 + + ++++ + T+NG IT+ +I+ +A L + K+ ++K ++ Sbjct: 4 ILFSTLSLVAAVSLNATVFATVNGMDITEREIAPIVAGLGPNVDISKLPDNIKKEILERS 63 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I++ L +E + SG+ LA Sbjct: 64 IMQQLLLKEAKDSGVAKGERFNREL-------------------------------ELAK 92 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + + + + E +I A K K ++ I+ + Sbjct: 93 EMLTIRLWQEEKAKNIKVAENDIKAFYDKNKAKFMQPAQIKAGHILVKTEAEAKTIINDL 152 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT- 258 + ++ +K + G + E + F + K + + Sbjct: 153 KNFKGDDLVKNFA--ITAAQKSLEPAARQTGGALGWFSEHQMVKPFYDAAKALKKGEISL 210 Query: 259 NPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P TQ G I D +D K + K+++ + K LR+ A + Y Sbjct: 211 KPVKTQFGYHVILKEDAKDAHQATFSEAKPTIENILKQEKLKETITKEAKDLRAKAKVEY 270 >gi|18309250|ref|NP_561184.1| hypothetical protein CPE0268 [Clostridium perfringens str. 13] gi|110800910|ref|YP_694723.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium perfringens ATCC 13124] gi|168207845|ref|ZP_02633850.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium perfringens E str. JGS1987] gi|168211827|ref|ZP_02637452.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium perfringens B str. ATCC 3626] gi|168215167|ref|ZP_02640792.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium perfringens CPE str. F4969] gi|168218257|ref|ZP_02643882.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium perfringens NCTC 8239] gi|169344703|ref|ZP_02865666.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium perfringens C str. JGS1495] gi|18143926|dbj|BAB79974.1| hypothetical protein [Clostridium perfringens str. 13] gi|110675557|gb|ABG84544.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium perfringens ATCC 13124] gi|169297170|gb|EDS79284.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium perfringens C str. JGS1495] gi|170660843|gb|EDT13526.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium perfringens E str. JGS1987] gi|170710226|gb|EDT22408.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium perfringens B str. ATCC 3626] gi|170713436|gb|EDT25618.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium perfringens CPE str. F4969] gi|182379724|gb|EDT77203.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium perfringens NCTC 8239] Length = 248 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 80/285 (28%), Gaps = 46/285 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQELIVETLKKQEIEKS 93 M ++ T+ IT I + IA Q+ + E ++ +++ I E K Sbjct: 1 MEKKVLATVGNTEITSDYIDEIIARYPAQQQAMLASDEGKRQVLEQAIA-FELMSEFAKE 59 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + + A+ + +V + Sbjct: 60 TGLDKTEEFKDQLNKFAKE------------------------------LLAQMVMKKTL 89 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E A ++ K V + + ++ K EE Sbjct: 90 SSVTVTDDEAKAFYEEHKENFVELETVTAKHILV--------ASEEEAKKVEEEIASGSI 141 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 + K++S G + + P+F+ + P TQ G I + Sbjct: 142 TFEDAANKYSSCPSKEQGGNLGSFSKGMMVPEFEEAAFNLELGVVSAPVKTQFGYHLIKV 201 Query: 273 CDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 DK + +K + + +K E +K+LR + Sbjct: 202 EDKTEAKTKAFEDVKEQVVNMLIQERQQKKYLELIKELREKYGVK 246 >gi|329901823|ref|ZP_08272915.1| Peptidyl-prolyl cis-trans isomerase domain protein [Oxalobacteraceae bacterium IMCC9480] gi|327549006|gb|EGF33618.1| Peptidyl-prolyl cis-trans isomerase domain protein [Oxalobacteraceae bacterium IMCC9480] Length = 244 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 40/277 (14%), Positives = 83/277 (29%), Gaps = 47/277 (16%) Query: 43 RTTINGEVI--TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG+ I + D+ + A + Q EL K+ +ELI + QE +K G+ ++ Sbjct: 11 LAVVNGKSIPSSRADLMVKQAATQGQADTPELRKMVKEELINREVLVQEADKLGLGNSAD 70 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + + + +V + + Sbjct: 71 VKSQL------------------------------EIARQSLVIRALVGDYVKKHPVSDA 100 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + +EY R +L D ++ K + + Sbjct: 101 DIKAEYDKFKATAGDKEYRARHILVEKEDEAKAIIVKLKA-----------GAKFEDLAK 149 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRDL 278 + G + + F + + ++ + T P TQ G I + D R Sbjct: 150 ASKDPGSAANGGDLDWASPASFVKPFSDAMVALAKGSYTEVPVKTQFGFHVIKLEDTRAA 209 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + Q + + +K EY ++LR+ A + Sbjct: 210 KV--PTLEEVKPQISESLQQKKLQEYQQELRAKAKVQ 244 >gi|310658175|ref|YP_003935896.1| ppic-type peptidyl-prolyl cis-trans isomerase [Clostridium sticklandii DSM 519] gi|308824953|emb|CBH20991.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium sticklandii] Length = 249 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 36/286 (12%), Positives = 83/286 (29%), Gaps = 47/286 (16%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQK----INGELEKIAVQELIVETLKKQEIEK 92 ++ + IT+ D+ + L Q + ++ +QEL+ + L E + Sbjct: 2 ENKEKVLAKVATHQITESDLEHMLKNLNPQIAANFQGEQGKQALLQELVNQKLFYLEALE 61 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 S I D+ + ++ + Sbjct: 62 SSIENDAKFQSE-------------------------------FEKLKENFVTQYSIQNL 90 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 + E+ A + K + ++ + D L + + + Sbjct: 91 INSVSVTHEELEAYYNENKEGFISPQKVQASHILVSDVSLAE---------EVKGKLAQG 141 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271 ++++S G E + P+F+ K + + P TQ G I Sbjct: 142 ESFEALAKEYSSCPSKERGGDLGMFGEGQMVPEFEEAAFKMAVGEISEPVETQFGFHIIK 201 Query: 272 ICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + DK++ G +++ L K ++ L+S + Sbjct: 202 VTDKQESGLLSFEEVRSNLLRNMMAEKQGAIYQNHIADLKSKYNVE 247 >gi|224025969|ref|ZP_03644335.1| hypothetical protein BACCOPRO_02720 [Bacteroides coprophilus DSM 18228] gi|224019205|gb|EEF77203.1| hypothetical protein BACCOPRO_02720 [Bacteroides coprophilus DSM 18228] Length = 457 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 37/292 (12%), Positives = 89/292 (30%), Gaps = 17/292 (5%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQKINGELEKIAVQELIVETLK 86 VS+ + + + E I D+ A + ++ +G+ + +EL ++ L Sbjct: 19 GTVSHAQNNVIDEVVWVVGDEAILKSDVEDERLQAQYEGRRFDGDPYCVIPEELAIQKLY 78 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 + E +T V + + ++ L Sbjct: 79 LHQAEIDSVTVSEQAVLQEVETYTAWLIEQIGTKEKMEEYYNKTSTQIREMLRENMRNKQ 138 Query: 147 V---VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + ++ + E+ K+ ++ L + + I + ++ Sbjct: 139 IVQEMQRKIVGDIKLTPAEVRNYFSKLPADSIPYILPQVEVQIITLEPKVTEEEKERIKS 198 Query: 204 DAEESRLRLPKDCNKLEKFASKI-----HDVSIGKAQYLLESDLHPQFQNLLKKSQN--N 256 + E R+ K A G+ ++ L P+F N++ + Sbjct: 199 ELREFTDRINKGETTFSTLARMYSEDPGSARQGGEYGFMGRGQLVPEFANVVFNLTDTKK 258 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + T+ G + +KR G+ ++ P +K E + KL Sbjct: 259 ISKVFETEFGFHIAQLIEKR---GDRVSYRHIL--LKPRIDQKEIDEALAKL 305 >gi|224825281|ref|ZP_03698386.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lutiella nitroferrum 2002] gi|224602202|gb|EEG08380.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lutiella nitroferrum 2002] Length = 258 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 34/296 (11%), Positives = 86/296 (29%), Gaps = 50/296 (16%) Query: 28 VPIVSYKSWAMSSRIRT---TINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIV 82 + + + + +S+ + +NG I+ I + +++ Q +L+ A +LI Sbjct: 5 LLLSTLTAAVLSTAVLAAPPVVNGTAISQSRIDAVVRMMEAQGQQSSPDLQAAARDQLIT 64 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + +Q K G+ + + + Sbjct: 65 AEILRQAAVKKGLDKSPEYRAEL------------------------------ENMQTMA 94 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + ++ DF + ++ A K+K+ + +P Sbjct: 95 LASRLI-KDFQRSNPVSDAQLRAEYDKIKSQFPEKKSYHARHILVPTEAEAKAV------ 147 Query: 203 KDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTN 259 ++ + ++ + + G + S+ F + K T+ Sbjct: 148 ---IDALRKGKAFDQLAKEKSIDPGSKNNGGDLGWSEASNFVAPFSEAMTKLAKGQVTSE 204 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 P T+ G I + D R + Q + +++ L++ A I Sbjct: 205 PVKTEFGWHVIKLDDVRTEAA--PPVEQIRPQLEQRIMSGRIEKFISDLKAKASIQ 258 >gi|308050304|ref|YP_003913870.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ferrimonas balearica DSM 9799] gi|307632494|gb|ADN76796.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ferrimonas balearica DSM 9799] Length = 624 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 45/398 (11%), Positives = 98/398 (24%), Gaps = 91/398 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + V++ F + + SY + +NGE IT D+ + Sbjct: 1 MLEKIREGSQGVAAKIILGAVILSFALTGVYSYLGTNSEM-LAAEVNGEEITRYDLDQAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q++ G+ + + Sbjct: 60 QNEQARMRAQLGEMFDSLSADPTYMAGLRQSVLDRLIAERLIDQKVADLGLRVSDDQIQQ 119 Query: 105 FFVQHARNTGLSAEDFSSFLD---KQGIGDNHFKQYLAIQSIWPDVV------------- 148 V D + + + + + L +V Sbjct: 120 AIVAMPEFQVDGKFDNARYQAVLRQNNLSGVQLRDMLRRDMSRQQLVVGLLGSEFVTDAE 179 Query: 149 --------------------KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + D+ + EI Q + + + Sbjct: 180 AQALTALQQQTRDLRYLLVSQADYNAGIEVSDSEISDFYQANQARFATPEEVSVEYVELA 239 Query: 189 DNKLQNQ----GFVQKRIKDAEESRLRLPKDCNKL------------------------- 219 + L K D++ + + P+ Sbjct: 240 VSDLAGDVSVTDEEAKAFYDSQANAYQQPERRLAAHMLFEGDDAQARAEAALARVRAGEA 299 Query: 220 ------EKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYI-- 270 E + G+ ++ + P F L + T++ T+ G + + Sbjct: 300 FAAVAAEASDDTFTAENGGELDWMTPGQMEPAFDAALFALQEGETSDVIKTEYGYQIVNA 359 Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + +KA + A K + +KL Sbjct: 360 KKIEAATQRPFDEVKASIIATLQADKAQTEFYGLQQKL 397 >gi|333029339|ref|ZP_08457400.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacteroides coprosuis DSM 18011] gi|332739936|gb|EGJ70418.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacteroides coprosuis DSM 18011] Length = 462 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 36/317 (11%), Positives = 102/317 (32%), Gaps = 20/317 (6%) Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-RIAL 62 K+ L+ + L + +L +P + + + + E+I D+ R+ Sbjct: 6 KMRNKLAIY---LRSAVLLCCLMALPKSVFAQNNVIDEVIWVVGDEIILKSDVESLRLQY 62 Query: 63 LKLQKI-NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 L K +G + +++ ++ L + + I + + + Sbjct: 63 LIDGKKIDGNPYCVIPEQIAIQKLFLNQAKLDSIEVSESAIIRQVDMYMAEYLKMFNSKE 122 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWP---DVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + + ++ L +V++ + E+ Q + ++ Sbjct: 123 KMEEVMNKTTSQIRRDLRNSLREGETVKMVQDKLVGDIAVTPAEVRRFFQDLPQDSIPYI 182 Query: 179 LIR---TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKI-HDVSIGK 233 + ++ +P L V+KR+++ + ++ + + G+ Sbjct: 183 PTKVEVQIITQLPRVSLAEVDDVKKRLREYTDQVNSGEMPFSTLARLYSEDLGSAMKGGE 242 Query: 234 AQYLLESDLHPQFQN--LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 ++ L P++ N + + T+ G I + +KR G+ ++ Sbjct: 243 IGFMGRGMLAPEYANVAFNMQEPGKVSKIVETEFGYHIIQLVEKR---GDRVNTRHIL-- 297 Query: 292 NTPTKIEKHEAEYVKKL 308 P ++ + KL Sbjct: 298 LKPKVSDEDLTKSTNKL 314 >gi|149192497|ref|ZP_01870682.1| peptidyl-prolyl cis-trans isomerse D [Vibrio shilonii AK1] gi|148833670|gb|EDL50722.1| peptidyl-prolyl cis-trans isomerse D [Vibrio shilonii AK1] Length = 432 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 96/396 (24%), Gaps = 91/396 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY + + + + I G+ + Sbjct: 1 MMERIREGVNSIAVKIILGLIILSFVFAGVGSYIAGGIGNT-AAKVGNVEIGRGEFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + K + +I + L +Q E G+ + Sbjct: 60 QNERNRMQSQLGDYFSTLLGDPSYVASFRKSVLDRMINDVLLEQHAESLGLRISDAQIRQ 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQG---IGDNHFKQYLAIQSIWPDVVK------------ 149 ++ + D + + F +YL + ++ Sbjct: 120 MILEMPQFQNDGKFDQDIYQATLRRAGFSADSFAEYLRRDLVRNQLLTALQGSEFTLPSE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRT------ 182 DF K + EI ++ R ++ Sbjct: 180 IELQSKLLTQTRDIKTLTLSLADFSKKAQITDEEIQKYYEENPGQFTRPEQVKVAYIELS 239 Query: 183 -------------VLFSIPDNKLQNQGFVQKRIKDAE--------------ESRLRLPKD 215 + D L ++R + Sbjct: 240 AQALKDQVKVTDDEIQKYYDEHLDKYSTSEQREVSHILVQGDDEAKAQAILDELNAGADF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 ++ + I G ++ + P F+ K+ +TT + G I + Sbjct: 300 ATLAKEKSEDIGSSEEGGSLGWIERDVMDPAFEEAAFALKNVGDTTGLVKSDFGYHIIKL 359 Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + E A + + ++ + L Sbjct: 360 DAIK--ASESKPLAEVKDEIIAELKDQVAVDEFYNL 393 >gi|149378497|ref|ZP_01896176.1| Parvulin-like peptidyl-prolyl isomerase [Marinobacter algicola DG893] gi|149357219|gb|EDM45762.1| Parvulin-like peptidyl-prolyl isomerase [Marinobacter algicola DG893] Length = 608 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 42/394 (10%), Positives = 98/394 (24%), Gaps = 86/394 (21%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + I + +++ I + + T+NGE IT+ + + + Sbjct: 1 LQDIRENAQGTIAKIIIGLLIVSLSIWGMDAIVGGFSGEPEVATVNGEDITEREFLRVVQ 60 Query: 62 LLKLQK------------INGELEKIAVQ-----------------ELIVETLKKQEIEK 92 + ++ ++ + + EL + + Sbjct: 61 IESQRRLSEMENPDPSLLDEDQVRQDVLDALIQQKVMTLNAEDQGLELSDADIDSLITQM 120 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND- 151 D FV RN G+ +F + KQ + + + + V Sbjct: 121 PQFQVDGTFNRDRFVSAVRNMGMGVAEFRETMRKQYVVNQIRAGISQSGVVTDENVAQLL 180 Query: 152 ------------------FMLKYGNLEMEIPANKQKMKNITVREYLI------------- 180 + + ++ A + K + Sbjct: 181 RIQNQTRNFRVTTLSADAVSDQVEVTDADVEAYYDENKEAFKLPESVDASYIVLSLAALA 240 Query: 181 ---------------------RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 +++ ++ + +E Sbjct: 241 ETIEISDEQLRDYYEQRASELMREERRASHILIEDGENAEETMATIQERLAGGESFAALA 300 Query: 220 EKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277 E+F+ + G + P F++ L + + P T GV I + D + Sbjct: 301 EEFSVDTVSAEQGGDLGFAERGVYDPAFEDALFALEEGEVSEPVSTSFGVHLIKLEDVQK 360 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 E A L Q ++ E ++RS Sbjct: 361 T--EAPPLAELEDQLRRELAQREATERFAEVRSE 392 >gi|331086426|ref|ZP_08335506.1| hypothetical protein HMPREF0987_01809 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406192|gb|EGG85715.1| hypothetical protein HMPREF0987_01809 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 246 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 29/281 (10%), Positives = 77/281 (27%), Gaps = 46/281 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQELIVETLKKQEIEKS 93 MS+ + + G+ IT+ ++ + ++ N + + +++LI L Q E Sbjct: 1 MSNEVLAVVAGKEITNAELDAFLQNAPREQQAYVTNPQFRQQYLEQLISLHLFAQAGED- 59 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + + A + I + + + Sbjct: 60 ------------------------------AKLEETEEFAKILENAKRDILAQLAMRETL 89 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E+ A ++ K + + + + E Sbjct: 90 KDVTVTDEEVAAYYEENKQQFTKGETVSAKHILVDSEEKCTSVL--------ESITSGEK 141 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAI 272 + ++ ++ G + + +F+ ++ + P TQ G I + Sbjct: 142 AFEDAAKEASTCPSGARGGDLGEFGKGQMVKEFEEAAFAAEIGHVVGPVKTQFGYHLIKV 201 Query: 273 CDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 K + +K + K V++L+ Sbjct: 202 EKKNEASVAVFDEVKEAIKRNLIQQKQNAAYNAKVQELKEK 242 >gi|51595313|ref|YP_069504.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Yersinia pseudotuberculosis IP 32953] gi|153948580|ref|YP_001402048.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Yersinia pseudotuberculosis IP 31758] gi|170025447|ref|YP_001721952.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pseudotuberculosis YPIII] gi|186894330|ref|YP_001871442.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pseudotuberculosis PB1/+] gi|51588595|emb|CAH20203.1| peptidyl-prolyl cis-trans isomerase, for periplasmic folding of outer membrane proteins [Yersinia pseudotuberculosis IP 32953] gi|152960075|gb|ABS47536.1| peptidyl-prolyl cis-trans isomerase [Yersinia pseudotuberculosis IP 31758] gi|169751981|gb|ACA69499.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia pseudotuberculosis YPIII] gi|186697356|gb|ACC87985.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia pseudotuberculosis PB1/+] Length = 628 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 37/399 (9%), Positives = 105/399 (26%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + +++ F + + SY + +N + I+ + + + Sbjct: 1 MMDNLRAAANNVVLKIILALIMLSFILTGVGSYLIGGSNDY-AAKVNDQDISRAQLEQAM 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +L + + +LI L Q K G+T V Sbjct: 60 QSERGRLQQKLGEQFSVLAANEGYMQQLRQQVLGQLINNVLLDQYARKLGLTVSDEQVKE 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY---LAIQSIWPDVVK------------ 149 Q D + +L +Q+ Q I ++K Sbjct: 120 SIRQIPDFQTGEHFDNNRYLALINQLGYTPEQFAQLQRQQLINQQLLKAFSDTGFVLPIE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + E+ A + K+ + ++ ++ Sbjct: 180 VQAMSALVLQQRDVRLATLDLKALQAEQKVTDEELQAYYDQNKHNFIAPEQMKVSFIAMD 239 Query: 189 DNKLQNQG-------------------------------FVQKRIKDAEESRLRLPKDCN 217 +Q+ + K A + + Sbjct: 240 AAAMQSNITVTEEDIAAYYDQNRSSYTQPERRNYSVIQFKTEAEAKAALDELKKGADFAV 299 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ I + G+ +L + + + ++ + G + + D + Sbjct: 300 IAKEKSTDIISRNNGGELGWLEPETTPDEVKAANLSEKGQLSDVIKSSVGYLIVRLNDIK 359 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + L+ + K +K+ A Sbjct: 360 PELVKPLSEVHDELAKKLKQEKALDAYYALQQKVNDAAT 398 >gi|325662683|ref|ZP_08151280.1| hypothetical protein HMPREF0490_02020 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471022|gb|EGC74249.1| hypothetical protein HMPREF0490_02020 [Lachnospiraceae bacterium 4_1_37FAA] Length = 246 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 29/281 (10%), Positives = 77/281 (27%), Gaps = 46/281 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQELIVETLKKQEIEKS 93 MS+ + + G+ IT+ ++ + ++ N + + +++LI L Q E Sbjct: 1 MSNEVLAVVAGKEITNAELDAFLQNAPREQQAYVTNPQFRQQYLEQLISLHLFAQAGED- 59 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + + A + I + + + Sbjct: 60 ------------------------------AKLEETEEFAKILENAKRDILAQLAMRETL 89 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E+ A ++ K + + + + E Sbjct: 90 KDVTVTDEEVAAYYEENKQQFTKGETVSAKHILVDSEEKCTSVL--------ESITSGEK 141 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAI 272 + ++ ++ G + + +F+ ++ + P TQ G I + Sbjct: 142 AFEDAAKEASTCPSGARGGDLGEFGKGQMVKEFEEAAFAAEIGHVVGPVKTQFGYHLIKV 201 Query: 273 CDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 K + +K + K V++L+ Sbjct: 202 EKKNEASVAAFDEVKEAIKRNLIQQKQNAAYNAKVQELKEK 242 >gi|237725280|ref|ZP_04555761.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D4] gi|265754206|ref|ZP_06089395.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_33FAA] gi|229436546|gb|EEO46623.1| peptidyl-prolyl cis-trans isomerase [Bacteroides dorei 5_1_36/D4] gi|263234915|gb|EEZ20470.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_33FAA] Length = 456 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 31/316 (9%), Positives = 93/316 (29%), Gaps = 16/316 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQKINGEL 72 + T + L++ + Y + + + E I D+ A + +K +G+ Sbjct: 5 MCTKVYALVLMLFAAVSVYGQDNVIDEVVWVVGDEAILKSDVENERLNAQYEGRKFDGDP 64 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 I ++L ++ L + I + + + Sbjct: 65 YCIIPEQLAIQKLFLHQAAIDSIEVSEQEIISDVERRTNWLIDQIGSKEKVEEYYNKTST 124 Query: 133 HFKQYLAIQSIWPDV---VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 ++ L ++ + E+ + + ++ + + I Sbjct: 125 QIREMLRENIRDGKTVQKMQQQIVGDIKITPAEVRRYFKDLPQDSIPFIPTQVEVQIITM 184 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-----IGKAQYLLESDLHP 244 Q +++ K + R+ A + G+ ++ ++L P Sbjct: 185 EPKIPQEEIERVKKTLRDYTERVTSGEIAFSTLARLYSEDEGSRRRGGELGFMGRAELVP 244 Query: 245 QFQN--LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT-PTKIEKHE 301 ++ N + N + ++ G I + +KR G+ ++ + K + Sbjct: 245 EYANVAFNLQDPNKVSKIVESEFGFHIIQLIEKR---GDRINTRHILLKPKVDEKDLEAA 301 Query: 302 AEYVKKLRSNAIIHYY 317 + + ++ + Sbjct: 302 LLRLDSIANDIRNEKF 317 >gi|206560348|ref|YP_002231112.1| putative exported isomerase [Burkholderia cenocepacia J2315] gi|198036389|emb|CAR52285.1| putative exported isomerase [Burkholderia cenocepacia J2315] Length = 260 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 82/278 (29%), Gaps = 47/278 (16%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I +A L Q +L++ QEL+ + QE + GI + Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDGPQLQQAVRQELVNREILMQEAIREGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + F+ K + Sbjct: 85 VKAQV-------------------------------AVAQQTVVLRSMIEGFLKKNQPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A ++ + + + + + K + + Sbjct: 114 AEVKARYDELVKGVGGNREYHLHHILVDNEQQAKDLIAKIK---------GGAKFEDLAK 164 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F +K + T+ P TQ G I + D RD Sbjct: 165 QYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDTPVKTQFGWHIIRVDDIRD 224 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + AQ +++ + + LR A I Sbjct: 225 IAP--PPFDQVKAQIAQQLVQQKLQAFEEGLRQQAKIQ 260 >gi|319406090|emb|CBI79720.1| peptidyl-prolyl cis-trans isomerase [Bartonella sp. AR 15-3] Length = 317 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 32/286 (11%), Positives = 73/286 (25%), Gaps = 48/286 (16%) Query: 36 WAMSSRIRTTINGEVITDGDISK---RIALLKLQKINGELEKIAVQELIVETLKKQEIEK 92 S + I+G+ IT G + + I ++ + + ++ + + + Sbjct: 45 PVSLSHVIAVIDGKNITAGQLDELALEINPNLVRVPDEQRRVTVLKAYLDMQALAKAALQ 104 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 G+ + + K Sbjct: 105 KGVDKTEAYDKR------------------------------MAIMRDNILQQLYFKEMV 134 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 + K + +++ NK+ E R +L ++ + + + Sbjct: 135 VDKIADADVKALYNKEIAALPKEDEIKARHIL-----------VKTKEEAEKIIKRLNKG 183 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYI 270 K +K ++ G Y + F+ T P + G I Sbjct: 184 EKFEEIAKKDSTDGSSAVGGDLGYFSRGQMVKSFEEAAFNLKVGEYTKKPIESPFGWHVI 243 Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I D+R + + I + + LRS + Y Sbjct: 244 KIEDRRLKQP--PVFDDVKEVLRTQLIRERYQTLITDLRSKVNVEY 287 >gi|119476198|ref|ZP_01616550.1| peptidyl-prolyl cis-trans isomerase D, putative [marine gamma proteobacterium HTCC2143] gi|119450825|gb|EAW32059.1| peptidyl-prolyl cis-trans isomerase D, putative [marine gamma proteobacterium HTCC2143] Length = 640 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 40/404 (9%), Positives = 102/404 (25%), Gaps = 92/404 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58 M + + I +++ F + I S + + +NG+ I+ ++ + Sbjct: 15 MLQNIRENSQGLIAKFIIGLIILTFALFGIDSLVGNNGPA-VVAAVNGDEISLAELEQGV 73 Query: 59 ------RIALLKLQKINGELEKI-----AVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + + L+ + LI + L Q + + ++ + Sbjct: 74 SLERRRLLNYMGENADPSLLDDQRLRGPVLDRLIQQKLLLQAAADASVGVSDAALDQTII 133 Query: 108 QHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV---------------- 148 + S E + S L G +KQ ++ + Sbjct: 134 AMEQFQEDGKFSPERYQSILRGSGYSTAFYKQLMSQDLTVAQLNSGISGSDFVISNELSE 193 Query: 149 -----------------KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV-------- 183 + + E EI + + E + Sbjct: 194 VSKIVGQQRSFRYFILPREKVAAQVIISEEEIQQHYNDNIDKYQSEEQVMLEYVEVKTAD 253 Query: 184 ---------LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK- 233 + ++ ++R + +D ++ + A ++ + G Sbjct: 254 FFKPVEADDIEREYALEIAAFEADEERRVSHILIEITDDRDASEARQLAEQLAEKLTGDT 313 Query: 234 ---------------------AQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIA 271 + + P+F+ L + + + P T G + Sbjct: 314 DFATIAREFSEDPGSSSDAGDLGFTMGDTFPPEFEAALFELALDQISEPIQTDAGYHLLK 373 Query: 272 ICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + R + + + + E V+ LR A Sbjct: 374 ATEIRGVSPAPFSERGSVIEGRLQQAAAEAEFVNAVEDLRDLAF 417 >gi|312876097|ref|ZP_07736085.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor lactoaceticus 6A] gi|311797083|gb|EFR13424.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor lactoaceticus 6A] Length = 335 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 36/318 (11%), Positives = 94/318 (29%), Gaps = 20/318 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL--- 62 + + VL+I I + +R +NGE IT + + Sbjct: 1 MDKRTKIVLFSIAAVVLLIILIAVTPEIVRYVDENRAVAIVNGEKITKKEFAINYKSQIN 60 Query: 63 ------------LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 + + ++++ + LI+ ++ Q+ K IT S Q Sbjct: 61 YYGLDKAFLSQKVGDKTYEQQIKENVLDGLIIRQIELQQARKRNITLSSAEKKAIDQQIE 120 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + S + + Q I +V + N + + Sbjct: 121 QYKSDSQSGTEF--KQYLQTIGATENEYKDQVIKSQIVSKLYDEVTKNQKASDAEIESYY 178 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDV 229 + ++ N + + +K+ ++ + +K++ Sbjct: 179 NSHKSDFVEVKASHILFKVNDSKEEAAKKKKAEEILQMIKDGQNFEKLAQKYSEDETTKQ 238 Query: 230 SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 G Y + + +F++ + ++ T G I + D++ L +K + Sbjct: 239 KGGDLGYFRKGQMVKEFEDAAFSLNIGEISSIVKTSYGFHIIKVTDRKQLLL-SDVKDEI 297 Query: 289 SAQNTPTKIEKHEAEYVK 306 + K +++ ++ Sbjct: 298 KSTIESQKKDEYYQSLLE 315 >gi|226940618|ref|YP_002795692.1| signal peptide protein [Laribacter hongkongensis HLHK9] gi|226715545|gb|ACO74683.1| Probable signal peptide protein [Laribacter hongkongensis HLHK9] Length = 263 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 31/298 (10%), Positives = 74/298 (24%), Gaps = 52/298 (17%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-----KINGELEKIAVQELI 81 + + + +NG I ++ ++ + K EL Q+LI Sbjct: 9 ALTFALATAGIAQAAPVAVVNGTAIQQNELDSAVSAIVRSGGGRIKDTPELRNEVKQQLI 68 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + QE + G+ S + Sbjct: 69 NRQVILQESARRGLDKTSQFK------------------------------ERMDAVRDD 98 Query: 142 SIWPDVVKNDFMLK-YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + ++ + + ++ +K K +E R ++ ++K Sbjct: 99 LLQQALIDDLAKQNPVSDAQVRAEYDKLKSALSGQKEVQARQIIVGSEAEANAVIAQLKK 158 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQNLLKKS-QNNTT 258 ++ + + G + + + LK + T Sbjct: 159 -----------GGNFEAIAKQKSKDPAAKQNGGDMGWGNLGVMAKPLADTLKPLGKGQYT 207 Query: 259 N-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 P+ + G + + RD + Q + + + LR A I Sbjct: 208 QQPFKSDLGWHIFKVENVRDAKV--PQFDEVKPQLSRQMQGAAVEKALNDLRGKAKIQ 263 >gi|331092188|ref|ZP_08341018.1| hypothetical protein HMPREF9477_01661 [Lachnospiraceae bacterium 2_1_46FAA] gi|330401960|gb|EGG81534.1| hypothetical protein HMPREF9477_01661 [Lachnospiraceae bacterium 2_1_46FAA] Length = 246 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 28/281 (9%), Positives = 72/281 (25%), Gaps = 46/281 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKIN----GELEKIAVQELIVETLKKQEIEKS 93 MS ++ T+ G+ IT+ ++ + + ++ + +++LI Sbjct: 1 MSEKVLATVAGQPITEEELQAFLNNVPREQQPYINNPQFRDQCLEQLIS----------- 49 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + + + A + I + + M Sbjct: 50 --------------------LHLFAQMGEEMKLEETEEFQQILKNAKKDILAQLAMRETM 89 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E+ A + + +K E Sbjct: 90 KGVEVSDEEVKAYYDANSQQFKKGATVSAKHILTDSE--------EKCQTILESILNGEK 141 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAI 272 + ++F++ G + +F+++ + P TQ G I + Sbjct: 142 TFEDSAKEFSTCPSGTRGGDLGQFGRGQMVKEFEDVAFEAEIGEVKGPVKTQFGYHLIKV 201 Query: 273 CDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ + +K + K E V L+ Sbjct: 202 ENRTEESVAAFDEVKETIRRSLVQQKQNAKYMEQVNVLKEK 242 >gi|18311465|ref|NP_563399.1| peptidylprolyl isomerase [Clostridium perfringens str. 13] gi|46396974|sp|Q8XHK0|PRSA_CLOPE RecName: Full=Foldase protein prsA; Flags: Precursor gi|18146149|dbj|BAB82189.1| probable protein export protein [Clostridium perfringens str. 13] Length = 342 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 39/331 (11%), Positives = 91/331 (27%), Gaps = 20/331 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 S+ + ++ +V A+ T+NGE IT G++ + + Sbjct: 1 MVSVKKIVASALVGVLMFSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFA 60 Query: 66 QKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 Q + + + VQ L+ + + E +K GI + + Sbjct: 61 QMKSQYGDKYMDDPQVAQQILQQRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQ 120 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 N D + + + + V++ + + + + Sbjct: 121 FENIKKGMGDNFDKALEAEGYTEDTFKDVIKNQVINQAVQDYIIKDVKVTDEDAQKYYDE 180 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 K V + + +N+ + Q + K N + K Sbjct: 181 NKQQFVAKDSGVLTKHLLFENEEEAQKAYDEIQSGKTTFNDLFTKYQNNKSEN-KKPIAE 239 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI---CDKRDLGGEIALKA 286 ++G + L + + P TQ G I +K +K+ Sbjct: 240 NLGVVPAENSGLVQEFVDGLKPLKEGEISKPIKTQFGYHIIQAGATYEKGAQLPFDEVKS 299 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + K + + + + + + Y Sbjct: 300 QIIQILKQQKDSEKFKADMDQWKKDLNVKVY 330 >gi|34498388|ref|NP_902603.1| signal peptide protein [Chromobacterium violaceum ATCC 12472] gi|34104242|gb|AAQ60601.1| probable signal peptide protein [Chromobacterium violaceum ATCC 12472] Length = 260 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 51/305 (16%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELE 73 + + S + A S +NG+ I+D + + +++ Q +N + Sbjct: 1 MRKILLQTALVAAFAGSAIAVAGPS-----VNGQPISDARVDAVVKMMEAQGQNVNPQAR 55 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +L+ + +QE K G+ A Sbjct: 56 DQIKDQLVTAEVLRQEAVKKGLDKSPEFNAELQNMQA----------------------- 92 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 ++ ++ D+ E ++ A K+ + Sbjct: 93 -------MALANRLI-KDYEKANPLSEADLKAEYDKLAASVPETKQFHARHILVKSEAEA 144 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLK 251 ++ + ++ + + G + F + + K Sbjct: 145 KSV---------IDALKKGKSFDKLAKEKSQDPGSKANGGDLGWQEAGTFVAPFSEAMSK 195 Query: 252 KSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 ++ T P T+ G I + D R + + Q T + +YV +L++ Sbjct: 196 LAKGEVTAKPVKTEYGWHVIKLDDVRTQRN-VPQLEEIRPQLTQRVMGARIEKYVAELKA 254 Query: 311 NAIIH 315 A I Sbjct: 255 KAQIQ 259 >gi|319408175|emb|CBI81828.1| peptidyl-prolyl cis-trans isomerase [Bartonella schoenbuchensis R1] Length = 316 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 29/287 (10%), Positives = 72/287 (25%), Gaps = 42/287 (14%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91 + S + ING+ IT G++ + EI Sbjct: 41 ASAKPIAPSHVMAIINGKSITAGELDE---------------------------LALEIN 73 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 + ++ + A+ + + + + K Sbjct: 74 PNLARLSDEQRRITVLKAYLDMQAFAKAAIEKGIDKTEVYDKRMAIMRDNVLQQLYFKQM 133 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + K + +++ +K+ E R +L ++ + + + Sbjct: 134 VVDKIQDADLQALYDKEVAALPKEDEVKARHIL-----------VKTKEAAEAIIKRLKK 182 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEY 269 +K ++ G Y + F++ T P + G Sbjct: 183 GESFEEIAKKDSTDGSASVGGDLGYFSYGQMVKPFEDAAFSLKVGEYTKKPVESPFGWHI 242 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D+R + ++ + LR+ + Y Sbjct: 243 IKVEDRRPKQP--PAFDDVKEVLRTQIMKDRYHALIIDLRNKVDVKY 287 >gi|116620335|ref|YP_822491.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Solibacter usitatus Ellin6076] gi|116223497|gb|ABJ82206.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Solibacter usitatus Ellin6076] Length = 327 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 40/315 (12%), Positives = 93/315 (29%), Gaps = 16/315 (5%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70 F ++ + + VP+++ ++ + T +G + +++ A L ++ Sbjct: 2 RFPSVVFLAALSVSAIGVPVMAQEAPKAQPPVMTRPDGATVPL-EVTPPPAPLPPNRVIL 60 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 ++ +IA+ +E + + E + + F Q R LS E LD+ Sbjct: 61 QVGEIALTAGQLEQILEAYSEAQRVYVNGPGRPQFIQQLIRVLMLSQEGKRRKLDETDRY 120 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 N A + D K + + + ++ ++ + + Sbjct: 121 RNQLTYSAAGILSNHT--EEDIRKKIKIDDAMLEDYLKAHPLDYMQVRARHILIRTPGSS 178 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--------HDVSIGKAQYLLESDL 242 G + +A L FA + G + + Sbjct: 179 LPLEPGQKELTDAEALTKAQELRAKIVAGADFADVAKIESNDISTNTKGGDLGFFKRGQM 238 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 P + + P T G I + + + + L+ L + Sbjct: 239 APSIEEAAFALKPGEISQPVKTSMGYTVIKVEEIKPVKSFEELRPDLERNLRN----ELT 294 Query: 302 AEYVKKLRSNAIIHY 316 +YV L++ I Sbjct: 295 RKYVDDLKALTKIEI 309 >gi|114799826|ref|YP_761850.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Hyphomonas neptunium ATCC 15444] gi|114740000|gb|ABI78125.1| PPIC-type PPIASE domain protein [Hyphomonas neptunium ATCC 15444] Length = 303 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 31/313 (9%), Positives = 91/313 (29%), Gaps = 55/313 (17%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS------RIRTTINGEVITDGDISKRIALLKL---- 65 T + ++ + S + + + + T+NGE I D+ L Sbjct: 8 FTAFCAVMAALTLAGCSQEGFQLEEPREVSREVAATVNGEAIYTADVEVEAVARGLVVSG 67 Query: 66 --QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 + E K + +LI + L QE ++ G+ D + + Sbjct: 68 ASLRAEDEAYKQVLDQLIDQKLMAQEAKRLGLEKDPAGMRRLEMAQ-------------- 113 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + + +V++ + + ++ +Q E + + Sbjct: 114 ----------------ERIMGNLLVESVVAEQVTDEMIDRMYAEQVRLQQVNDEVSVAHI 157 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 + + + + ++ + + G ++ +DL Sbjct: 158 VT--------DTEEEAEAVWLRVQAGEAFESLVFNHSNDS--ATRMENGDLGFVSPNDLP 207 Query: 244 PQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 + ++ + P+ + + + D+R + + + + + Sbjct: 208 DPYPVVIANTPVGEVAPPFEAEGSWRIVKVKDRRTEPPKT--RDEMRPEIATFLTLSEVS 265 Query: 303 EYVKKLRSNAIIH 315 +++LR+ A I Sbjct: 266 RILRRLRTEARIE 278 >gi|119774365|ref|YP_927105.1| peptidyl-prolyl cis-trans isomerase D [Shewanella amazonensis SB2B] gi|119766865|gb|ABL99435.1| peptidyl-prolyl cis-trans isomerase D [Shewanella amazonensis SB2B] Length = 615 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 44/403 (10%), Positives = 97/403 (24%), Gaps = 95/403 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ I V++ F + SY + T+NGE I + + Sbjct: 1 MLEKIREGAQGTIAKSILVLVILSFAFTGVSSYLGSSTE-PAAATVNGEEIPVSALEQAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 K + + + ++ +I + L Q + G+ + Sbjct: 60 QNEKARMEQQLGEMFQTLAADDNYLRSIRQGVLERMIADKLLDQTASEMGLRISDEQIKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK------ 155 ++ E + + L + G N F+ + + +V + Sbjct: 120 AIMEEPAFQTEGKFDNERYLAILRQLGYQTNSFRDMMRVDMTRRQLVNALIGSEFVLPSE 179 Query: 156 ---------------------------YGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 + E + + ++ + Sbjct: 180 SKAVAELQGQTRDLRYLVVESQPFEAGITVADDEAKSFYDANPDQFIKPEQVSLEYLTLS 239 Query: 185 ---------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA------ 223 + D + +KR+ L + K + A Sbjct: 240 AKSLADEVSVTDEQAKAYYDEHMSQYKTPEKRLAAHILVNLGDDEAAAKTKADAIYAKLQ 299 Query: 224 --------------SKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVE 268 G+ + + + P F + L ++ + T G Sbjct: 300 AGADFAELAKTDSEDTFSGELGGQLDWFEQGVMDPAFDEALFGLEKDQYSAVVKTDYGFH 359 Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 I + D GG A + + EK + L+ Sbjct: 360 IIKLLDV--QGGAQASFDEVKDRIFAQIKEKDALDKFYSLQQK 400 >gi|310766848|gb|ADP11798.1| putative protease maturation protein [Erwinia sp. Ejp617] Length = 623 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 31/396 (7%), Positives = 105/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + + +++ F + + Y + +NG+ I + + Sbjct: 1 MMDNLRAASNHVVLKVILGLIILSFILTGVGGYLTGGSGDY-AAKVNGQEIGRAQLERAF 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + ++ ++ + A+ +LI E L Q ++ G+ + + Sbjct: 60 SSERARQQQMLGEQFSVLAGNEGYMQQMRQQALSQLIDEMLLTQYAKEIGLAIGDDQIKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 + S ++ G + + + L Q ++ Sbjct: 120 AIFTQPAFQTDGKFDNAKYLSIINNMGFTADQYAEALRKQLTTQQLIGSVTGTDFVLGNE 179 Query: 149 ---------KNDFMLKY-----------GNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + + EI Q+ ++ + R + Sbjct: 180 TDSLAALVAQQRLVREVTINVNAMAAKQNVTQEEIANYYQQHQSSLMSPEQFRVSYIKMD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 + +Q ++ + + Sbjct: 240 ASAMQQPVSESDIQSWYQQHQDDYTQPQRNRYSIIQTKTEAEARSVLDALKKGGSFAKLA 299 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ + G +L + +N K + ++ + G + D + Sbjct: 300 KEKSADPISARNGGDMGWLEPETTPDELKNAALKEKGQLSDVITSSVGFIVARLDDTQPE 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + ++ + K + +K+ A Sbjct: 360 KVKALSEVHDEIARKLKQEKAVVAFYKLQQKVSDAA 395 >gi|152980669|ref|YP_001353234.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Janthinobacterium sp. Marseille] gi|151280746|gb|ABR89156.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Janthinobacterium sp. Marseille] Length = 259 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 86/308 (27%), Gaps = 54/308 (17%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI--TDGDISKRIALLKLQKING 70 + L + + + + + +NG+ I + D+ + + Q+ Sbjct: 1 MTLKPAHLLAALIVSASLPAMAQN------LAVVNGKPIPSSRADVMIKQMTSQGQQDTP 54 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 EL + ELI + QE +K G+ ++ N Sbjct: 55 ELRAMVKDELINREILIQEADKLGLGAQADVKNQI------------------------- 89 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + + +V + + + +EY R +L Sbjct: 90 -----EIARQSILIRALVADYLKKNPVKDADIKAEYDRFKAQASDKEYHARHIL------ 138 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL 249 + K K + + + + G + + F + Sbjct: 139 -----VEKEDEAKAIIAKLKGGAKFEDLAKASSKDPGSAANGGDLDWASPASFVKPFSDA 193 Query: 250 LKK-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + + P TQ G I + D R +I + Q + +K + ++ Sbjct: 194 MVALQKGQLSETPVKTQFGYHVIKLDDVR--TAKIPTLEEVKPQIAESLQQKKLQAFQQQ 251 Query: 308 LRSNAIIH 315 LRS A I Sbjct: 252 LRSKAKIQ 259 >gi|92114164|ref|YP_574092.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chromohalobacter salexigens DSM 3043] gi|91797254|gb|ABE59393.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chromohalobacter salexigens DSM 3043] Length = 602 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 42/394 (10%), Positives = 99/394 (25%), Gaps = 82/394 (20%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKS-WAMSSRIRTTINGEVITDGDISKR 59 M ++ ++ + +++ F + S + S T+NGE I + + Sbjct: 1 MLQRIREGSQGWVAKMIVGAIIVTFALFGAESLVGVFTSGSDDIATVNGEPIKRQAVELQ 60 Query: 60 IAL-----LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF----VQHA 110 + + EL + ++I L Q E+ G+ ++ Sbjct: 61 VQRGIRSGQVPPEQERELRAQVIDQMITTELLDQYAEEGGMHLSDAQIDQLIVSRPEFQD 120 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN-------------------- 150 S E FS+ L G F++ L + + Sbjct: 121 SEGNFSQELFSNRLASAGYTPLSFRRELRRDMKRQQLQQGVALSTFVLPGEAERLQALQN 180 Query: 151 ---------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD------ 189 + ++ +M+ + + + + V+ + D Sbjct: 181 QTRDFRYASLTADDLEAPVEVTESDMQAYYEAHQDQYQRPEQVKVAYVVLNQQDVAQDVD 240 Query: 190 ------------NKLQNQGFVQKRIKDAEESRLRLPKDC------------NKLEKFASK 225 + V + D + R R A++ Sbjct: 241 VDEQQLRDAYAAEREDAPREVAHVMVDYGDERSRDEAMARIEEAQGQLAEGADFADVAAE 300 Query: 226 IH-----DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG 279 G + F + + ++ + G+ I + D D+ Sbjct: 301 YSDDATTANKGGNLGVINRGFFGDAFDDAAFSLDEGQVSSVVDSGDGLHLIKVTDI-DMP 359 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + L+ Q E ++L + Sbjct: 360 SFDEQRDELAEQVRLDNSRDAFNERAQQLEDRSY 393 >gi|164688476|ref|ZP_02212504.1| hypothetical protein CLOBAR_02121 [Clostridium bartlettii DSM 16795] gi|164602889|gb|EDQ96354.1| hypothetical protein CLOBAR_02121 [Clostridium bartlettii DSM 16795] Length = 250 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 31/281 (11%), Positives = 71/281 (25%), Gaps = 46/281 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIA----LLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 M +I + + I++ DI I Q E K +++L+ + L + + Sbjct: 1 MEKKILAKVGDKEISNIDIDNAIQGLDPYQAQQFQTEEGRKYVLEDLVNQELLYMYAKDN 60 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 I D + V N + Sbjct: 61 KIDEDEAFKKEMAEIEKN-------------------------------VLKQYVINQIL 89 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E A + K + + N+ Q + D Sbjct: 90 TSVKLTDEEKQAFYEANKTNFSNPETANAKHILVDSEEKANEILAQIKAGDV-------- 141 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAI 272 + ++ G + P+F+ + + + P TQ G I + Sbjct: 142 TFEDAARANSTCPSKDQGGDLGTFGRGQMVPEFEEATFAMNVGDVSEPVKTQFGYHLIKL 201 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 K + + + + K + + ++++ Sbjct: 202 EAKNEPSIPAYEEIADKVEKTLMFQKQGEVYKNKLDEVKAK 242 >gi|212690536|ref|ZP_03298664.1| hypothetical protein BACDOR_00018 [Bacteroides dorei DSM 17855] gi|237708008|ref|ZP_04538489.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 9_1_42FAA] gi|212666885|gb|EEB27457.1| hypothetical protein BACDOR_00018 [Bacteroides dorei DSM 17855] gi|229457994|gb|EEO63715.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 9_1_42FAA] Length = 456 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 31/316 (9%), Positives = 93/316 (29%), Gaps = 16/316 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQKINGEL 72 + T + L++ + Y + + + E I D+ A + +K +G+ Sbjct: 5 MCTKVYALVLMLFAAVSVYGQDNVIDEVVWVVGDEAILKSDVENERLNAQYEGRKFDGDP 64 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 I ++L ++ L + I + + + Sbjct: 65 YCIIPEQLAIQKLFLHQAAIDSIEVSEQEIISDVERRTNWLIDQIGSKEKVEEYYNKTST 124 Query: 133 HFKQYLAIQSIWPDV---VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 ++ L ++ + E+ + + ++ + + I Sbjct: 125 QIREMLRENIRDGKTVQKMQQQIVGDIKITPAEVRRYFKDLPQDSIPFIPTQVEVQIITM 184 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-----IGKAQYLLESDLHP 244 Q +++ K + R+ A + G+ ++ ++L P Sbjct: 185 EPKIPQEEIERVKKTLRDYTERVTSGEIAFSTLARLYSEDEGSRRRGGELGFMGRAELVP 244 Query: 245 QFQN--LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT-PTKIEKHE 301 ++ N + N + ++ G I + +KR G+ ++ + K + Sbjct: 245 EYANVAFNLQDPNKVSKIVESEFGFHIIQLIEKR---GDRINTRHILLKPKVDEKDLEAA 301 Query: 302 AEYVKKLRSNAIIHYY 317 + + ++ + Sbjct: 302 LLRLDSIANDIRNEKF 317 >gi|325981462|ref|YP_004293864.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas sp. AL212] gi|325530981|gb|ADZ25702.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas sp. AL212] Length = 264 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 92/304 (30%), Gaps = 46/304 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG--DISKRIALLKLQKINGELE 73 L + ++I + ++++ A SS + +NG I ++ + + + Q+ E+ Sbjct: 3 LKKFSQVMIISVWGLIAFSVQAQSSGVVAKVNGVAIPQSRLELMVKANVAQGQQDGPEMR 62 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 K + LI E + QE K + D + Sbjct: 63 KALRENLIAEEILAQEATKKRLDQDPEVIAQL---------------------------- 94 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 +A Q++ + D++ + + ++ + + +N+ + Sbjct: 95 ---EIARQAVLVRAFQADYIKHNQVSDDTLRKEYDVLRVQMGDKEYKARHILVENENEAR 151 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL--LK 251 + K+ + + EK + G+ + + F Sbjct: 152 DIIASLKKGGNFAKIAE---------EKSIDDGSKENGGELNWSPPAAYVRPFSEALVKL 202 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 T P T G I + D R + + +++ A V+ LRS Sbjct: 203 SKGGMTEQPVQTSFGWHVIQLMDIRPMEV--PPFEEVKQNIQQRVLQREFATVVQDLRSK 260 Query: 312 AIIH 315 A + Sbjct: 261 AKVE 264 >gi|289548356|ref|YP_003473344.1| SurA domain protein [Thermocrinis albus DSM 14484] gi|289181973|gb|ADC89217.1| SurA domain protein [Thermocrinis albus DSM 14484] Length = 283 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 101/302 (33%), Gaps = 26/302 (8%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + +++ + S+ + R+ ++NGE I + ++ LL K Sbjct: 6 IAKLSCGVLLLTALSFWSF-GLTLLDRVVASVNGEPILESEV-----LLGKLFFGSNDRK 59 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + +L+ + L Q + G+ V+ Q + L+ E + L K G+ Sbjct: 60 KVLDKLVEDMLLYQYAQSKGMGVPDQMVDAAVNQILQANNLTMEGLAKELSKDGLSLEDL 119 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 K +L + + + + + ++++ K K I V+ + + Sbjct: 120 KNFLRREILATQGITALLLRETKVQDIDVELEKLKRGMIKVKREISVLTVD--------- 170 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 + + K E + + + + + DL + + Sbjct: 171 ----KAKGKKLLELTEKGLDLDKVARDLGLQPERL------LVSKGDLVEPLDREVWAAP 220 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +T + + I ++ + L Q K+E+ E +KKLRS A+I Sbjct: 221 VGSTVVAEDKDHIYLAKILGVKEETS-SVNEEELREQILRRKLEEKREELLKKLRSTAVI 279 Query: 315 HY 316 Y Sbjct: 280 RY 281 >gi|293413696|ref|ZP_06656345.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli B185] gi|291433754|gb|EFF06727.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli B185] Length = 623 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 39/396 (9%), Positives = 103/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEK------------ 92 + + L + + LI E L Q + Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 93 -----SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN--------HFKQYLA 139 D N + G++A+ ++ L Q F Sbjct: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 140 IQSIWPDVVKNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + V + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQDQFTQPQRARYSIIQTKTEDEAKAVLDELNKGGDFAALA 299 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATIPDELKNAGLKQKGQLSGVIKSSVGFLIVRLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|159185780|ref|NP_357092.2| peptidyl-prolyl cis-trans isomerase [Agrobacterium tumefaciens str. C58] gi|159140914|gb|AAK89877.2| peptidyl-prolyl cis-trans isomerase [Agrobacterium tumefaciens str. C58] Length = 288 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 29/302 (9%), Positives = 80/302 (26%), Gaps = 48/302 (15%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL---KLQKINGELEKIA 76 + + ++A ++ + I ++ + L Q + + + A Sbjct: 7 IAAAVIVATLGLQLPAFAQEDKVVAKVGDLEIHQSELDLAMGNLDPQLAQLPDEQKKVAA 66 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + I L + + G+ + + Sbjct: 67 LSGAIDVKLLVKNADAEGLEKTEDFKKR------------------------------ME 96 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 ++ + + + + N E++ +K+ E +L Sbjct: 97 FIKDRELHNAYFRKHVVDAVTNDEVKARYDKEVAALPQEEEIKAAHIL-----------V 145 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + KD + ++ ++ + G + + + P+F+ + Sbjct: 146 ASEDEAKDIIKQLDSGKDFAALAKEKSTDSNKDDGGDLGWFGKGRMVPEFEEAAFGLEKG 205 Query: 257 TT--NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P TQ G I + DKR + Q + ++K +++ I Sbjct: 206 AYTKTPVKTQFGFHVIKLEDKRIAPP--PAFEQVEPQVRQLVMRDKYVALIEKAKADQKI 263 Query: 315 HY 316 Sbjct: 264 EI 265 >gi|78776717|ref|YP_393032.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfurimonas denitrificans DSM 1251] gi|78497257|gb|ABB43797.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfurimonas denitrificans DSM 1251] Length = 277 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 39/301 (12%), Positives = 89/301 (29%), Gaps = 41/301 (13%) Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK-------INGELEKIAVQ 78 + + + ++S++ ++NG IT D+ K + + E K ++ Sbjct: 7 LVSSLALLSAISLSAQTLVSVNGTEITQQDVDKELMAATQGRFNQVPAEKQAEFRKQVLE 66 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 +L+ + L + +K+G+ + Sbjct: 67 QLVAKELVYDDAKKTGVLTSPEYKEKY---------------------------EEVTQR 99 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + I V + + K E+ K V + + Sbjct: 100 IQKEIAIQVWQKREIDKIAISNDELKKYYDANKEEFVENESVNARHILVEKESDAKNIIA 159 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNN 256 + + + + + + ++ G Y + P+F + K++ Sbjct: 160 ELKPLKGDALKNKF---MELAKSKSTCASAAEGGDLGYFTAGQMVPEFNDKAFSMKAKEM 216 Query: 257 TTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T P TQ G I I DK + +K+++ + K + +K+L A I Sbjct: 217 TLEPVKTQFGYHVIYIEDKKAKATKNFTEVKSFIEQRLKMEKAKTVMLAKMKELEKKATI 276 Query: 315 H 315 Sbjct: 277 K 277 >gi|170720931|ref|YP_001748619.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida W619] gi|169758934|gb|ACA72250.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida W619] Length = 623 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 49/402 (12%), Positives = 114/402 (28%), Gaps = 89/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++++ + + A S+ +NG+ I+ ++S+ Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIVVLMALTGFEAIFQAASHSQDAAKVNGQTISQNELSQAA 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q + L A++ LI L Q + + F ++ Sbjct: 61 DMQRRQLMQQLGKDFDPALLDEKLLRDAALKGLIERKLLLQGAKDAKFAFSEAALDQVIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM--- 161 + + +A+ F + + G G F++ LA + + V + + Sbjct: 121 QTPEFQVDGKFNADRFDQVIRQMGYGRLQFREMLAEEMLIGQVRTGIAGSSFVTDQQVDA 180 Query: 162 --------------------------EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + ++ + V+ + K Sbjct: 181 FARLENQTRDFASLTFKANPAAVKVSDDEVKAHYEQHAKEFMTPDQVVIDYVELKKSAFF 240 Query: 196 GFVQKRIKDAEESRLR---------------------------------LPKDCNKLEKF 222 V+ + + + + + K E F Sbjct: 241 DQVKVTDDELKAQYEKEIANLAEQRHAAHILIEVNDKVTDAQAKARIEEVEQRLAKGEDF 300 Query: 223 ASKIHDVS--------IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 A + S G + P F++ K + P TQ G I + Sbjct: 301 AKLAKEFSQDPGSANSGGDLGFAGPGVYDPVFEDALYKLDDGQVSAPVRTQFGYHLIKLL 360 Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 K+ ++ +LK L+ +E+ + K+L+ A Sbjct: 361 GKQAPEVPSFASLKDKLTRDLKTPLVEQRYVDASKQLQDAAY 402 >gi|313681753|ref|YP_004059491.1| ppic-type peptidyl-prolyl cis-trans isomerase [Sulfuricurvum kujiense DSM 16994] gi|313154613|gb|ADR33291.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfuricurvum kujiense DSM 16994] Length = 280 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 78/283 (27%), Gaps = 41/283 (14%) Query: 45 TINGEVITDGDISKRIALLKLQK-------INGELEKIAVQELIVETLKKQEIEKSGITF 97 T+NG+ IT +++K + + EL + ++ +I + L + +K G+ Sbjct: 26 TVNGDEITSDEVNKVLMEGTQGRFDSLPADKQNELRQRIIEGMIAQELVYDDAQKIGVLD 85 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + V + Sbjct: 86 SKEYKQEL---------------------------EALVNRLKVQLAAKVWEQQQFEAIK 118 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E+ A V + I + + ++ R Sbjct: 119 VDAKEVKAYFDANPEEFVDKEKIHARHILVKTEGEAQSIIKSMKGLSGDKLRNEF---IA 175 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT--TNPYVTQKGVEYIAICDK 275 + + ++ G Y + P F + + + P +Q G I I DK Sbjct: 176 QAKSKSTGPSAAKGGDLGYFPRGQMVPSFNDAAFAMKEGAISSTPVQSQFGYHVIYIEDK 235 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G +K ++ + K + + + LR+ A I Y Sbjct: 236 KPAKKLGFDEVKNFIEQRLKMDKFKATMEKKMSDLRAKAKIIY 278 >gi|326791007|ref|YP_004308828.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium lentocellum DSM 5427] gi|326541771|gb|ADZ83630.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium lentocellum DSM 5427] Length = 246 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 30/284 (10%), Positives = 75/284 (26%), Gaps = 46/284 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALL---KLQKINGELEKIAVQELIVETLKKQEIEKSG 94 M +++ ++G I D+ + + +Q + E +K V EL+++ L + K G Sbjct: 1 MENKVLAVVDGRAIKQSDLYDLLRSIGQNAMQFQSEEGQKQLVDELVMQELLYSDAIKHG 60 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 + + + + Sbjct: 61 LDKEEEFTAALEQMTKS-------------------------------LLKQYAMGKLLE 89 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + E+ + + + + + + + + + Sbjct: 90 SVTASDEEVKEYYETHQGQFKSDEAAKANHILVATLEEAEKVAEEIK---------AGLS 140 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAIC 273 +K+++ G + P+F+ S + P TQ G I + Sbjct: 141 FAEAAKKYSTCPSASQGGALGEFTRGRMVPEFETAAFAMSPGEISAPVQTQFGYHIIELE 200 Query: 274 DKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 A+K + Q K + ++L S + Sbjct: 201 ALTPAGLSPLEAVKEQVKEQCLLAKRQALYLAKRQELESLYTVE 244 >gi|312128222|ref|YP_003993096.1| ppic-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor hydrothermalis 108] gi|311778241|gb|ADQ07727.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor hydrothermalis 108] Length = 335 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 34/318 (10%), Positives = 93/318 (29%), Gaps = 20/318 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI----- 60 + + VL+I I + +R +NGE IT + + Sbjct: 1 MDKRTKIVLFSIAAVVLLIILIAVTPEIVRYVDENRAVAIVNGEKITKKEFAINYRSQIN 60 Query: 61 ----------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 + + ++++ + LI+ ++ Q+ K IT + Sbjct: 61 YYGLDKAFLSQKVGDKTYEQQIKENVLNGLIIRQIELQQARKRNITLTAAEKKAI--DQQ 118 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + + + Q I +V + N + + Sbjct: 119 IQQYKSDSQSGAEFKQYLQTIGATENEYKDQVIKSQIVSKLYDEVTKNQKATDAEIESYY 178 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDV 229 + ++ N + + +K+ ++ + +K++ Sbjct: 179 NSHKSDFVEVKASHILFKVNDSKEEATKKKKAEEILQMIKDGQNFEKLAQKYSEDETTKQ 238 Query: 230 SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 G Y + + +F++ + ++ T G I + D++ L +K + Sbjct: 239 KGGDLGYFRKGQMVKEFEDAAFSLNIGEISSIVKTSYGFHIIKVTDRKQLSLNE-VKDEI 297 Query: 289 SAQNTPTKIEKHEAEYVK 306 + K +++ ++ Sbjct: 298 KSTIESQKKDEYYQSLLE 315 >gi|261418900|ref|YP_003252582.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp. Y412MC61] gi|297531148|ref|YP_003672423.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp. C56-T3] gi|319765717|ref|YP_004131218.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp. Y412MC52] gi|261375357|gb|ACX78100.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp. Y412MC61] gi|297254400|gb|ADI27846.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp. C56-T3] gi|317110583|gb|ADU93075.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp. Y412MC52] Length = 281 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 85/304 (27%), Gaps = 41/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + + +S S S I T NG IT + + + K Sbjct: 1 MKKWMMAAAVVSLMALSACSNDGSEAIVETKNGN-ITKDEFYNEMK--------ERVGKS 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 +++LI E + ++ + + D + + + Sbjct: 52 VLRDLIDEKVLSKKYKVTDEEIDREIERI--------------KEAYGTQYDLAVQQNGE 97 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + + E E+ K +++ Sbjct: 98 KVIREMVKLDLLRTKAAVEDIKVTEKELKEYYDNYKPKIRASHIL--------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 +K K+ + + ++++ + G + + +F+ K Sbjct: 143 VKDEKTAKEVKAKLDKGEDFAKLAKEYSQDPGSASNGGDLGWFGPGKMVKEFEEAAYKLK 202 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-AEYVKKLRSNA 312 ++P T G I + DK +K ++ + K++ V KL +A Sbjct: 203 VGEVSDPVKTDYGYHIIKVTDKEKKKSFNEMKDEIAFEVKRNKLDPATMQSKVDKLVKDA 262 Query: 313 IIHY 316 + Sbjct: 263 GVEI 266 >gi|126641590|ref|YP_001084574.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii ATCC 17978] Length = 414 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 35/293 (11%), Positives = 94/293 (32%), Gaps = 19/293 (6%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIA----LLKLQK----INGELEKIAVQELIVETL 85 + + ++ VI D+ + +A L+ QK L+ + +LI+ Sbjct: 3 SFAQPTDEVVAIVDNSVILKSDLEQGMAEAAHELQAQKKEVPPQQYLQFQVLDQLILRQA 62 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + ++++K GI D ++N ++ A +G + + +A Sbjct: 63 QLEQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQKLDAIAPGTYENLRSRIAEDLA 122 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + + M + + ++ + + + I + Q V K ++ Sbjct: 123 INRLRQQQVMSRIKISDQDVDNFLKSPQGQAALGNQAHVIHMRISGDNPQEVQNVAKEVR 182 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYV 262 L N L+K ++ V + SD+ + + TT+ Sbjct: 183 SQLAQSNDL----NALKKLSTATVKVEGADMGFRPLSDIPAELAARITPLQDGQTTDLIS 238 Query: 263 TQKGVEYIAICDKRD----LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + GV + + +++ ++ Q + ++ + + + Sbjct: 239 VRDGVHVLKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENAKQIIDSIYKR 291 Score = 88.2 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 17/157 (10%), Positives = 52/157 (33%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + ++K +T I +++ + ++ I + + Sbjct: 246 LKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENAKQIIDSIYKRLKAGEDFATLAATY 305 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 ++ G ++ + P+F + + + + P+ TQ G + + DKR+ Sbjct: 306 SNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHILQVTDKREKDM 365 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + +++++R+NA + Sbjct: 366 THEYQERMARQILGERQFNTEIDSWLREVRANAYVEI 402 >gi|89100557|ref|ZP_01173417.1| post-translocation molecular chaperone [Bacillus sp. NRRL B-14911] gi|89084744|gb|EAR63885.1| post-translocation molecular chaperone [Bacillus sp. NRRL B-14911] Length = 293 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 31/301 (10%), Positives = 98/301 (32%), Gaps = 27/301 (8%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + F+ +++ + + + ++ E I ++ + Sbjct: 1 MMGFLTK-KIGLGILVLILAAAGTAAFFLSKEPAVASVGSESIKKEELYSLLV------- 52 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + A+ L+ + + + E +K +T + + G E F + L++ G Sbjct: 53 -KQYGDEALDALVTDKIIEMEAKKEKVTISNKEKEEELKNLKESYG-GEEGFKAALEQSG 110 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + + +++ + E EI A ++ K+ ++ ++ Sbjct: 111 VTEAGIAEDIEKYLKTEKLLE----PRIDLKEDEIKAYFEENKDQFAQQEQVKASHIL-- 164 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQ 247 + K+ + + + + +++++ S G+ Y + ++ F+ Sbjct: 165 -------VEDEATAKEVKSKLDKGEEFADLAKEYSTDASNAESGGELGYFGKGEMEAAFE 217 Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEY 304 + N + P T G I + DK++ K +++ + Sbjct: 218 EAAFELKANEISGPVKTDYGYHIIKVEDKKEAKEAVYEDSKEAAKKALFDERMQTEYYNW 277 Query: 305 V 305 + Sbjct: 278 L 278 >gi|332878099|ref|ZP_08445829.1| PPIC-type PPIASE domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684061|gb|EGJ56928.1| PPIC-type PPIASE domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 459 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 32/302 (10%), Positives = 89/302 (29%), Gaps = 17/302 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 ++ F KLL + L + + + + + + E I D+ I Sbjct: 1 MNLFKKLLYAFVFLFEGIQMHLFAQSPNNVVDEVIWVVGDEAILRSDVEAARMDFGA-NI 59 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 +G + ++L ++ L + + + +++ ++ + A + Sbjct: 60 SGNPYCVIPEQLAIQKLFLHQAQLDSVEVENSQISANMEARLNELIMRAGSKEKLEEYYH 119 Query: 129 IGDNHFKQYLAIQSIWP---DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 ++ + V+ + E+ + M ++ + + Sbjct: 120 KTMTQIREMMFESLKEQYTVQRVRENLTSDIKVTPAEVRRYFKDMPEDSLPWISDQVEVQ 179 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-----IGKAQYLLES 240 I Q +++ + + R+ + A + G+ Y+ Sbjct: 180 IITQQPRIPQEEIERVKAELRDYTDRVNNGESSFSTLAILYSEDPGSARYGGEMDYVGRG 239 Query: 241 DLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 +L P F N+ + ++ G I + DKR + + K+ Sbjct: 240 ELDPAFANVAFSLTDPKKISKVVESEYGFHIIQLVDKRGDKVK------VRHILRKPKLA 293 Query: 299 KH 300 + Sbjct: 294 QA 295 >gi|283779465|ref|YP_003370220.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pirellula staleyi DSM 6068] gi|283437918|gb|ADB16360.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pirellula staleyi DSM 6068] Length = 325 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 79/289 (27%), Gaps = 22/289 (7%) Query: 9 LSDFIKLLTTYFVLII-FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--- 64 ++ KL T + ++ + + + T+NG IT D+ +A L Sbjct: 1 MNLLAKLPATCVAASLPLLLLVAMGAAAELSADETLATVNGHAITRADVDAFVAKLAPPK 60 Query: 65 -----------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 N +L + L+ L +E+S + + Sbjct: 61 SSTQPPQPVEVPVVDNPQLRAETLAMLVDRELVLSFLERSKLAASEED----IDLIVASF 116 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 LD Q +W + K + + +E K+ Sbjct: 117 TRELTTQGLTLDDHLKQQQLSLARFRRQLLWNESWKKYVARQTTDANLEKFFTKRVRDFD 176 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL-EKFASKIHDVSIG 232 R + L + + V R ++ + S ++F+ S G Sbjct: 177 GTRIRVAHLRLPVDANATPEAAEQVMARAREIKRSIDAGELTFAAACQQFSEAPSAKSGG 236 Query: 233 KAQYLLE-SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG 279 + ++ + F T+ P ++ GV+ + Sbjct: 237 ELGWIGRHDSMPEPFAAAAFSLEVGQTSGPVLSPVGVQLVHCLAIEPGK 285 >gi|332829602|gb|EGK02248.1| hypothetical protein HMPREF9455_01518 [Dysgonomonas gadei ATCC BAA-286] Length = 461 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 97/309 (31%), Gaps = 18/309 (5%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K + +L I ++ + +I + E I D+ K ++ + E Sbjct: 1 MVKQAGKFILLAILLSSGLLCKAQDNIIDQIIWVVGDEAILKSDVEKARQMMLSRGERIE 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 E++AVQ+L ++ K I+ N G + Sbjct: 61 GDPYCLIPEQLAVQKLFLDQAKIDSIDVPTAEVSRGVTRQE-NMVIANLGSKEKVEEYLQ 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI---R 181 +++ + + +V K K E+ ++ ++ Sbjct: 120 ASMSQLREEWREEIRNGYLVSEVKKKLVGKKSSLTPSEVRRYYAQLPQDSLPYIPTTVEV 179 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 ++ + P L V++R++D ++ + G+ + + Sbjct: 180 QIITNEPIVPLAEIDKVKERLRDFTNRVNAGESFSTLAIMYSEDGSAQNGGETGFSGRAS 239 Query: 242 LHPQFQNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 +F N+ + +N T+ G I + ++R G++ ++ P E Sbjct: 240 WVTEFSNMAFSLNDPKKVSNIVETEYGFHIIQLIERR---GDLINVRHIL--LRPKVPEA 294 Query: 300 HEAEYVKKL 308 + + K+ Sbjct: 295 EFEKAIAKM 303 >gi|254247979|ref|ZP_04941300.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia cenocepacia PC184] gi|124872755|gb|EAY64471.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia cenocepacia PC184] Length = 260 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 39/278 (14%), Positives = 81/278 (29%), Gaps = 47/278 (16%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I +A L Q +L++ QEL+ + QE + GI + Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDGPQLQQAVRQELVNREILMQEAIREGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + F+ K + Sbjct: 85 VKAQV-------------------------------AVAQQTVVLRSMIESFLKKNQPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ ++ + + + + + K + + Sbjct: 114 AEVKTRYDELVKGVGGNREYHLHHILVDNEQQAKDLIAKIK---------GGAKFEDLAK 164 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F +K + T+ P TQ G I + D RD Sbjct: 165 QYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDAPVKTQFGWHIIRVDDIRD 224 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + AQ +++ + + LR A I Sbjct: 225 IAP--PPFDQVKAQIAQQLVQQKLQAFEEGLRQQAKIQ 260 >gi|158421935|ref|YP_001523227.1| PpiC-type peptidyl-prolyl cis-trans isomerase precursor [Azorhizobium caulinodans ORS 571] gi|158328824|dbj|BAF86309.1| PpiC-type peptidyl-prolyl cis-trans isomerase precursor [Azorhizobium caulinodans ORS 571] Length = 314 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 80/281 (28%), Gaps = 48/281 (17%) Query: 39 SSRIRTTINGEVITDGDI---SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 S + T+NG I ++ I Q ++ + L TL Q + + Sbjct: 49 SDPVVETVNGAPIRASELAIAEDDIGPGLPQVQGAARQEYILSFLTDMTLLAQAAQAQKL 108 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 YL +++ ++ + Sbjct: 109 DQSPEFAAK------------------------------MNYLRTKALMETLMAAEAKKA 138 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 ++ + E R +L + + K+ Sbjct: 139 VTEDAKRKTYDEFVKQTKPETEVHARHIL-----------VDSEAKAKEIAAKAKAGADF 187 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICD 274 ++ + G Y + + P+F + K + ++P TQ G I + D Sbjct: 188 AKLAKENSKD-SAEDGGDLGYFTKDQMVPEFADAAFKLDKGQVSDPVKTQFGWHVIKVED 246 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 KR I +S Q I K +++ V KLRS+A + Sbjct: 247 KRQKP--IPTYEQVSDQIDQYLIRKAQSDLVTKLRSDAKVE 285 >gi|87306930|ref|ZP_01089076.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Blastopirellula marina DSM 3645] gi|87290303|gb|EAQ82191.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Blastopirellula marina DSM 3645] Length = 369 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 36/293 (12%), Positives = 85/293 (29%), Gaps = 32/293 (10%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGEL------EKIAVQELIVETLKKQEIEKSG 94 I +N I D D+ + A G+L + + LI L Q IE + Sbjct: 57 EIEAFVNNAPIYDVDVERAAAKAFGAASKGDLDLPFGLKSSVLNRLIDRELALQYIESTD 116 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 S+ VN + + + ++L + ++ +A WP Sbjct: 117 FRPSSSEVNREISRVKKELEARGKSLDAYLTENHTDMRMLRRRIAWNIAWPRY------A 170 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI---KDAEESRLR 211 + + + + + + + +Q ++R + + + Sbjct: 171 DASLTDDNLRRYFELHRRDFDGTQRKLSQILLTTNETEPSQVVERQRDIAARLRVQIKRG 230 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLE-SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEY 269 +++ G ++ + L + N + P T G+ Sbjct: 231 EFAFEKAARSYSNAPSSEQGGLVGWIGRHNQLPEEIHNAAFDAPLGEVAGPIQTSFGIHL 290 Query: 270 IAICDKR-DLGGEIALKAYLSAQNTPTKIEKHEAEYV-----KKLRSNAIIHY 316 I + +++ +K + + Y+ + RS A + Y Sbjct: 291 ICVTEEQLGEIPWEEVKHEVR---------EAAERYLFSYTADRGRSQADVKY 334 >gi|126668935|ref|ZP_01739876.1| Parvulin-like peptidyl-prolyl isomerase [Marinobacter sp. ELB17] gi|126626598|gb|EAZ97254.1| Parvulin-like peptidyl-prolyl isomerase [Marinobacter sp. ELB17] Length = 624 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 43/399 (10%), Positives = 103/399 (25%), Gaps = 86/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + I + +++ + + + T+NG+ IT+ + + + Sbjct: 1 MLQDMRENAQGTIAKIIIGLLILSLSVWGMDAIIGGFSGEPEVATVNGQDITEREFLRVV 60 Query: 61 ALLKLQK------------INGELEKIAVQELIVETLKKQEIEKS--------------- 93 L + ++ +Q LI E + Q+ ++ Sbjct: 61 QLESQNRLSRMERPDPSLLDEDQIRVDVLQALIEEQVLAQDADRQGLALSDADIDALITQ 120 Query: 94 --GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN----------------HFK 135 D FV RN G+ +F + KQ + + Sbjct: 121 MPQFQVDGQFNRDQFVTTVRNVGMGVGEFRDAMRKQTVVNQIRAGIVASGVVTSNSITRL 180 Query: 136 QYLAIQSIWPDVVK---NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS------ 186 + Q+ ++ + + +I A N+ + + Sbjct: 181 MKIQNQTRDFRLLNISASAVADQVNVSAGDIQAFYDSNPNLFQQPEQVDVSYVVLSLNAL 240 Query: 187 ----------------------------IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 +++ ++ ++ Sbjct: 241 ADAIVISDEELLTYYQSREADLAREERRAAHILVEDTADADAVVERIQQRLADGEDFAAL 300 Query: 219 LEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ + G + P F + L ++P T GV I + D R Sbjct: 301 AQELSIDTVSGEQGGDLGFAGRGVYDPAFDEALFSLEPGTVSDPVRTSFGVHLIKLNDIR 360 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 D+ + A L + + + A+ L +A Sbjct: 361 RSDVPALADVAAQLRDDLSREQAREAYAQARTTLADSAY 399 >gi|108758423|ref|YP_630863.1| peptidylprolyl cis-trans isomerase [Myxococcus xanthus DK 1622] gi|108462303|gb|ABF87488.1| peptidylprolyl cis-trans isomerase [Myxococcus xanthus DK 1622] Length = 524 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 41/371 (11%), Positives = 94/371 (25%), Gaps = 69/371 (18%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS----KRIALLKLQ- 66 FI + F L A + ++NG+ I D + ++++ L+ Q Sbjct: 17 FIIGIAVVFTLQFGPGSSGFGATGGATAPGSVASVNGKEIPLRDFAAAWAQQMSFLRSQG 76 Query: 67 -------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 + + L+ L Q E+ GI + + Q+ D Sbjct: 77 SPVPESLARQFGMHNQVLDRLVNTELLAQAAERHGIAASDDELRKLIHQNTDFQKDGQFD 136 Query: 120 FSSFLD----KQGIGDNHFKQYLAIQSIWPDVVK-------------------------- 149 F + F+ L Q ++ Sbjct: 137 FERYQQVLRDFYRKSPQDFEAELRRQLAAQKMMDVVRGNAVVSDDEVRARFEKEGNQAKV 196 Query: 150 -------NDFMLKY------------GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + K E +I + + + + IR + Sbjct: 197 VFARFLPAMYADKVPSPTAAQLAEWKKAHEKDIKEYFEANRFVYQQPERIRARQVLVKLP 256 Query: 191 KLQNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF 246 + ++ A+ R + G ++ P Sbjct: 257 PEATADQKKAALEKAQALRKEIEGGKDFAQVARDSSEDPGSKARGGDLGWVERGSWEPAL 316 Query: 247 QNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPT-KIEKHEA 302 + Q T P T+ GV + + +K+ + ++ ++ + ++ Sbjct: 317 ADAAFALKQGEVTQPVETKFGVHLVKVDEKQAAQDKKLEDVQDEIATTLYKQDRAKQQAR 376 Query: 303 EYVKKLRSNAI 313 +K ++A Sbjct: 377 AEAEKALASAK 387 >gi|146277165|ref|YP_001167324.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides ATCC 17025] gi|145555406|gb|ABP70019.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sphaeroides ATCC 17025] Length = 405 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 98/276 (35%), Gaps = 7/276 (2%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT---TINGEVITDGDISKRIALLKLQKIN 69 +K ++ + + + A + + +N VIT+ + +R+ L + Sbjct: 1 MKTFVSHCLAFVMASGLTFASAVDAPAQNLFAPRLVVNDRVITNYEFEQRVRFLTILGAT 60 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 G+LEK A+ LI + ++ E++G+ + V + A LSAE F + L K G+ Sbjct: 61 GDLEKQAMDALIDDKIRLDAAERAGLKATESQVTEGMEEFAGRANLSAEAFVAELGKAGV 120 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 F+ ++ +W ++++ F + E I + T L+ ++ P Sbjct: 121 APETFRDFVHAGLVWRELMRARFGAEARPSETAIDRAITRQTRRTTIRLLLSEIIIPTPP 180 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL-ESDLHPQFQN 248 + + + + I+ + + + G+ ++ ++ Sbjct: 181 GQEADALALAEEIRRTAQGETAFAQAARSYS---ASSSAERGGRIDWVPLQNLPPSLGPL 237 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 LL S ++P V + + Sbjct: 238 LLTLSPGQVSDPLKIPNAVALFQVRAIDETSEPAPA 273 >gi|118602546|ref|YP_903761.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567485|gb|ABL02290.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 298 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 38/295 (12%), Positives = 97/295 (32%), Gaps = 5/295 (1%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 ++ S ++ + + I +N +++T IS I + L + LI++ Sbjct: 4 TLLLICAFSLNAFTIPNSIIAIVNDDLVTFDQISVDIKSNHTKVQKLVLVNQQID-LILQ 62 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 K +++ + N++ + + + F + Q I Sbjct: 63 LQKIKQLNITPKENAINSMLGNIASNNNLNLMQLQSLPKFDEVIDHVKQSLSLEGLRQFI 122 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++ ++ ++ P + K+ + + + ++ + Sbjct: 123 VENLDIKLTEVEIIKQLIKTPNHSNKLTQQIKIAQIAVNSIDQVDSLLRSKDSLIKDFLI 182 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYV 262 D E + + ++ + GK+ +L L F+ S + + P+ Sbjct: 183 DLSEKINKGDSFSTLAKLYSQDASYKNGGKSDWLNLLKLPEIFKQNLKNLSVGDLSQPFK 242 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + I DKR + + L + K + +++KKLR A I + Sbjct: 243 IGQVWRIVKIIDKRSVDNYLI---ELKTKLIRQKENIYFNDWIKKLRKEAYIEIF 294 >gi|227485003|ref|ZP_03915319.1| possible peptidylprolyl isomerase PrsA [Anaerococcus lactolyticus ATCC 51172] gi|227237000|gb|EEI87015.1| possible peptidylprolyl isomerase PrsA [Anaerococcus lactolyticus ATCC 51172] Length = 343 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 35/275 (12%), Positives = 88/275 (32%), Gaps = 23/275 (8%) Query: 43 RTTINGEVITDGDISKRIALL-KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 +NGE I+ ++ + L+ VQ ++ + L +++ + I Sbjct: 47 IAIVNGEKISKDAYKAEMSFYGSMLASRQNLKNSIVQMMVQDKLIADDMKANKIEISDKE 106 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 VN F+ + G + D + + + + F ++ E Sbjct: 107 VNDAFLNSVKQFGGQEQFDKMLDDYNMDVEKFKETVKKD--LMYKKHREWFEKEHPVTEE 164 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 EI + K+ + ++ +K K+ ++ + ++ Sbjct: 165 EIKQYYEDNKDKFAKRDASHILV------------ADEKTAKEVKDKLDKGADFAALAKE 212 Query: 222 FASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG 279 ++ + + G+ + +F++ + + P TQ G I + D Sbjct: 213 YSKDTANAANGGELGTFSRGQMVKEFEDAAFSLKEGEISGPVKTQFGYHIIKVNKIADSI 272 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + T +K ++Y+K+L A + Sbjct: 273 EDN------KEAITKALNDKKYSDYIKELNKKANV 301 >gi|83749030|ref|ZP_00946037.1| Signal Peptide isomerase rotamase [Ralstonia solanacearum UW551] gi|83724293|gb|EAP71464.1| Signal Peptide isomerase rotamase [Ralstonia solanacearum UW551] Length = 299 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 65/280 (23%), Gaps = 48/280 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +NG I + I Q + EL A L+ L +Q+ K G Sbjct: 61 AAVVNGHAIPSAKVDALIKK-SGQPDSPELRNRARDMLVDRELIEQDAAKRG-------- 111 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + Q Q+ +V +F N Sbjct: 112 --------------------------LLGRDDVQEQLAQARLNVLVAAEFEDYVKNSPTT 145 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++ + I + + + + Sbjct: 146 EDELHKQYEKIKAQFGNGKEYHAHHILVDKEADAKA------IIAKLKAGGNFEEIAKAQ 199 Query: 223 ASK-IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDL- 278 + + G + P+F L + T P TQ G I + D RD Sbjct: 200 SKDKGSGANGGDLDWANPGTYVPEFSAALTGLKKGEITLTPVKTQFGWHVIRLDDTRDAK 259 Query: 279 -GGEIALKAYLSAQNTPTK--IEKHEAEYVKKLRSNAIIH 315 +K L + +K LR A I Sbjct: 260 IPAFEDVKPQLLEMMMGDQNWQRAKFQAMLKDLREKATIK 299 >gi|319404585|emb|CBI78191.1| peptidyl-prolyl cis-trans isomerase [Bartonella rochalimae ATCC BAA-1498] Length = 308 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 30/290 (10%), Positives = 74/290 (25%), Gaps = 48/290 (16%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISK---RIALLKLQKINGELEKIAVQELIVETLKKQ 88 + + S + I+G+ IT G + + I ++ + + ++ + + Sbjct: 32 AAEKPVPLSHVIAVIDGKNITAGQLDELALEINPNLVRVPDEKRRVTVLKAYLDMQALAK 91 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 + G+ + + Sbjct: 92 AALQKGLDKTEAYDKR------------------------------MAIMRDNILQQLYF 121 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 K + K + +++ +K+ E R +L ++ + + Sbjct: 122 KEMVVDKIADADVKALYDKEIAALPKEDEIKARHIL-----------VKTKEEAEKVIKR 170 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKG 266 + +K ++ G Y + F+ T P + G Sbjct: 171 LNKGESFEEIAKKDSTDGSSAVGGDLGYFSRGQMVKPFEEAAFNLKVGEYTKKPVESPFG 230 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I I D+R + + I +H + LR + Y Sbjct: 231 WHVIKIEDRRLKQP--PVFDDVKDVLRTQLIREHYQTLITDLRGKINVEY 278 >gi|217967894|ref|YP_002353400.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dictyoglomus turgidum DSM 6724] gi|217336993|gb|ACK42786.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dictyoglomus turgidum DSM 6724] Length = 355 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 45/323 (13%), Positives = 91/323 (28%), Gaps = 27/323 (8%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ---- 66 K+L FV I V+ M + ING ++ + R+ +K Q Sbjct: 5 SIFKILFIVFVAIFILGGAFVALVYHQMKNYPVLKINGMPVSRQEYKDRLNFMKTQYSIM 64 Query: 67 -------KINGELEKIAVQELIVE---TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +L E I + Q K S ++ S Sbjct: 65 FNVDFTTTEGQKLLPKVKDETIKDLARWKIVQTEAKKRGISISEKEVDTRLKEIEKEFPS 124 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 F L + G N FK+ L + ++ + E EI + + Sbjct: 125 VLQFEMTLAQYGYDRNTFKEELRKNLLMRKLID-EIGKDEKVTEDEIKKYYNENIKLF-- 181 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQ 235 ++ + E + +K++ G+ Sbjct: 182 ------EHPKEYKVYSILIKDEKRAKEVYNELTSNKITFTDAAKKYSEDTTTKDKGGELG 235 Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQN 292 ++ + L + + + N + P T +G + + ++ KA + + Sbjct: 236 FITQGTLPEEVEKITFTLPLNQISKPIKTNEGYYITKVTEVKEAYTTPYFQAKAEIEDKL 295 Query: 293 TPTKIEKHEAEYVKKLRSNAIIH 315 K K ++++ S A I Sbjct: 296 LYDKRAKVFNKWLEDQVSKAKIE 318 >gi|258545949|ref|ZP_05706183.1| peptidyl-prolyl cis-trans isomerase SurA [Cardiobacterium hominis ATCC 15826] gi|258518827|gb|EEV87686.1| peptidyl-prolyl cis-trans isomerase SurA [Cardiobacterium hominis ATCC 15826] Length = 433 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 29/273 (10%), Positives = 82/273 (30%), Gaps = 12/273 (4%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELI-----VETLKKQEIEKSGITFDSNTVNYF 105 IT+ + + IA L ++ + LI + E++ + Sbjct: 165 ITERQVDEYIAKLAREQGSTI---HVQDLLIPLPEGDAQSRAGEVDAKIREVSQALRDSG 221 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + ++ ++ D + ++V++ + G +++ + Sbjct: 222 GNLQQASARVAGARYNDLGDVNLGRIPPRFARALAKLGAGEIVESPVVDDDGMHFLKVAS 281 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 N T+ E + +L D + N I ++ + + A Sbjct: 282 KHSAEGNYTLAEADVSHILLRNNDGRDDNSKARIDAIYRELQAGADFASLARRYSEDAQ- 340 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDL-GGEIA 283 G ++ + ++ + + P T G + + ++R E Sbjct: 341 -SAAKGGDLGWVSADQFGGELAQAIETQAVGSISKPIKTPYGYHILLVRERRQSDKSEAV 399 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ + +++ + ++ LR A I Sbjct: 400 VREQIKRNLYAKALDEAWQQRLQSLRREAYIDI 432 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 37/262 (14%), Positives = 87/262 (33%), Gaps = 13/262 (4%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQ 88 + I +N E IT +++ I + ELE ++ +I+ L Q Sbjct: 35 ASQPIDEIGLVVNDEAITRRQLTQEIEAARRNLPKELKLPAGELEHQLLEHVIMNHLLAQ 94 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAED-FSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 +K G+ + +N Q A +S + ++ G+ + F++ + + Sbjct: 95 IEKKVGLEISEDELNTAIAQIAGRNKVSEQKLYAQAQRDTGLSRDAFREQVRKSLAQEHM 154 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG-FVQKRIKDAE 206 + E ++ K+ ++ +L +P+ Q++ V +I++ Sbjct: 155 KEGMVGADINITERQVDEYIAKLAREQGSTIHVQDLLIPLPEGDAQSRAGEVDAKIREVS 214 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTN-PYVTQ 264 ++ + + + + + P+F L K P V Sbjct: 215 QALRDSGGNLQQASARVAGARYN---DLGDVNLGRIPPRFARALAKLGAGEIVESPVVDD 271 Query: 265 KGVEYIAICDKRDLGGEIALKA 286 G+ ++ + K G L Sbjct: 272 DGMHFLKVASKHSAEGNYTLAE 293 >gi|219856704|ref|YP_002473826.1| hypothetical protein CKR_3361 [Clostridium kluyveri NBRC 12016] gi|219570428|dbj|BAH08412.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 258 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 30/282 (10%), Positives = 78/282 (27%), Gaps = 39/282 (13%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 M + + +N IT+ D + ++ ++L+ E + + G Sbjct: 12 MQNNVLAIVNNVEITENDFKNVVKRFPAERQQYFNTDEGKKQLLDEIISFELFYNYGKEI 71 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + + V+ + + + + + + M Sbjct: 72 ELEKDRDYLVKL--------------------------ETTKKELLIQETI-SKIMENIK 104 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + E+ K++ + I + + Q + + + + Sbjct: 105 VTDKEVEDYYTNNKSMYKKPENITARHILVDSFEKAAQISNEIK---------KGLSFED 155 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276 +K++S G + P+F+ + + P TQ G I + K Sbjct: 156 AAKKYSSCPSKAQGGNLGNFTRGQMVPEFETAAFQLEIGILSKPVKTQFGYHLIKVEKKE 215 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G +K + K ++ + L+ I Sbjct: 216 KDSIKGFDKVKNAIKNGLLQEKRTLEYSKCINNLKDKYPIEI 257 >gi|157828738|ref|YP_001494980.1| protein export protein prsA precursor [Rickettsia rickettsii str. 'Sheila Smith'] gi|157801219|gb|ABV76472.1| protein export protein prsA precursor [Rickettsia rickettsii str. 'Sheila Smith'] Length = 282 Score = 90.9 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 81/301 (26%), Gaps = 38/301 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + +IF V ++S ++A ++ T G + I K + ++ Sbjct: 4 LSVIFLSVSMLSGIAFADKDKVVATYKGGEVKASQIMKEFKPQLNLQSGETIKN------ 57 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 ++ N L E+ + + Sbjct: 58 --------------FDDFPPQDQEKLIKIYVNNLLLKEEVAKSNITSSKEFQEKLENAKN 103 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +++ N + + NK + + +L QK Sbjct: 104 QLAQQELLANYIKSNITDKMFDDEYNKYVGNLKGKEQIKVAHIL-----------VKSQK 152 Query: 201 RIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL---LESDLHPQFQNLLKK-SQN 255 D + + E+ + K + G Y+ L P+F+ N Sbjct: 153 EANDIKTKLSKGGNFTKLAEELSLDKASASNGGVIGYILLNQPGQLVPEFEKKAFALKVN 212 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + +K+ + I K + +Y+ L + A + Sbjct: 213 EVSTPVKTDFGWHIIKVLEKKPVP--IPTKEEAKVTIDNILAAEILKKYIADLEAKANVK 270 Query: 316 Y 316 Sbjct: 271 I 271 >gi|209543390|ref|YP_002275619.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gluconacetobacter diazotrophicus PAl 5] gi|209531067|gb|ACI51004.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gluconacetobacter diazotrophicus PAl 5] Length = 308 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 30/276 (10%), Positives = 71/276 (25%), Gaps = 50/276 (18%) Query: 43 RTTINGEVITDGDISKRIALLKLQK---INGELEKIAVQELIVETLKKQEIEKSGITFDS 99 ++NGE I D+ + A + Q + + + +LI + + Sbjct: 50 VASVNGEDIHLADVRQAAANMPAQLRQLPPNMIFPMLLNQLIDQKAIQAAAT-------- 101 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + A+ ++ + + Sbjct: 102 ----------------------HAGLDKQPDVQQQMHAAAMNALQNAYLSQQVTPTLTDA 139 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 ++ + E R +L + KD + Sbjct: 140 AVQAYYTQHYANKKPEAEIHARHIL-----------VATEAEAKDVIKQLKAGADFGALA 188 Query: 220 EKFA--SKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTN-PYVTQKGVEYIAICDK 275 K + + G + + D+ P F + + + P TQ G I + D Sbjct: 189 TKLSTDKASAKQNGGDLGWFKKGDMLPAFSDAAFAMKPHTFSQTPVHTQYGWHVIEVLDT 248 Query: 276 R--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 R D+ A++ + + + + V ++ Sbjct: 249 RTADVPKLDAVRDEIRQKLIQQGVRDAVEKAVAGVK 284 >gi|283479299|emb|CAY75215.1| putative protease maturation protein [Erwinia pyrifoliae DSM 12163] Length = 623 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 31/396 (7%), Positives = 105/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + + +++ F + + Y + +NG+ I + + Sbjct: 1 MMDNLRAASNHVVLKVILGLIILSFILTGVGGYLTGGSGDY-AAKVNGQEIGRAQLERAF 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + ++ ++ + A+ +LI E L Q ++ G+ + + Sbjct: 60 SSERARQQQMLGEQFSVLAGNEGYMQQMRQQALSQLIDEMLLTQYAKEIGLAIGDDQIKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 + S ++ G + + + L Q ++ Sbjct: 120 AIFTQPAFQTDGKFDNAKYLSIINNMGFTADQYAEALRKQLTTQQLIGSVTGTDFVLGNE 179 Query: 149 ---------KNDFMLKY-----------GNLEMEIPANKQKMKNITVREYLIRTV----- 183 + + + + EI Q+ ++ + R Sbjct: 180 TDSLAALVAQQRLVREVTINVNALAAKQNVTQEEIANYYQQHQSSLMSPEQFRVSYIKMD 239 Query: 184 ------------LFSIPDNKLQNQGF------------VQKRIKDAEESRLRLPKDCNKL 219 + S + + + ++ + Sbjct: 240 ASAMLQPVSESDIQSWYQQHQDDYTQPQRNRYSIIQTKTEAEARSVLDALNKGGSFAKLA 299 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ + G +L + +N K + ++ + G + D + Sbjct: 300 KEKSADPISARNGGDMGWLEPETTPDELKNAALKEKGQLSDVITSSVGFIVARLDDTQPE 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + ++ + K + +K+ A Sbjct: 360 KVKALSEVHDEIARKLKQEKAVVAFYKLQQKVSDAA 395 >gi|107028909|ref|YP_626004.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia AU 1054] gi|116689933|ref|YP_835556.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia HI2424] gi|170733271|ref|YP_001765218.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia MC0-3] gi|105898073|gb|ABF81031.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia AU 1054] gi|116648022|gb|ABK08663.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia HI2424] gi|169816513|gb|ACA91096.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia MC0-3] Length = 260 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 82/278 (29%), Gaps = 47/278 (16%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I +A L Q +L++ QEL+ + QE + GI + Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDGPQLQQAVRQELVNREILMQEAIREGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + F+ K + Sbjct: 85 VKAQV-------------------------------AVAQQTVVLRSMIESFLKKNQPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A ++ + + + + + K + + Sbjct: 114 AEVKARYDELVKGVGGNREYHLHHILVDNEQQAKDLIAKIK---------GGAKFEDLAK 164 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F +K + T+ P TQ G I + D RD Sbjct: 165 QYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDAPVKTQFGWHIIRVDDIRD 224 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + AQ +++ + + LR A I Sbjct: 225 IAP--PPFDQVKAQIAQQLVQQKLQAFEEGLRQQAKIQ 260 >gi|312623037|ref|YP_004024650.1| ppic-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor kronotskyensis 2002] gi|312203504|gb|ADQ46831.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor kronotskyensis 2002] Length = 335 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 39/318 (12%), Positives = 95/318 (29%), Gaps = 20/318 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI----SKRIA 61 + + VL+I I + +R +NGE IT + +I Sbjct: 1 MDKRTKIVLFSIAAVVLLIILIAVTPEIVKYVDENRAVAIVNGEKITKKEFAINYRSQIN 60 Query: 62 LLKLQKI-----------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 L K ++++ + LI+ ++ Q+ ++ I S Q Sbjct: 61 YYGLDKTFLSQKVGDKTYEQQIKENVLDGLIIRQIELQQAKRKNIALTSAEKKAIDQQIE 120 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + S + + Q I +V + N + + Sbjct: 121 QYKSDSQSGAEF--KQYLQTIGATENEYKDQVIKSQIVSKLYDEITKNQKATDAEIENYY 178 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDV 229 + ++ N + + +K+ ++ + +K++ Sbjct: 179 SSHKSDFVEVKASHILFKVNDSKEEATKKKKAEEVLQMIKDGQNFEKLAQKYSEDETTKQ 238 Query: 230 SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 G Y + + +F++ + +N T G I + DK+ L +K + Sbjct: 239 KGGDLGYFRKGQMVKEFEDAAFSLNIGEISNIVKTSYGYHIIKVTDKKQLSLNE-VKDEI 297 Query: 289 SAQNTPTKIEKHEAEYVK 306 + K +++ ++ Sbjct: 298 KSTIESQKKDEYYQSLLE 315 >gi|296157842|ref|ZP_06840676.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. Ch1-1] gi|295892088|gb|EFG71872.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. Ch1-1] Length = 259 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 79/278 (28%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I I L + Q+ +L+ +EL+ + QE + G+ + Sbjct: 25 IAVVNGTPIPKARADALIDQLVHQGQQNTPQLQTAVREELVNREILMQEALRRGLPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + DF+ + Sbjct: 85 IKAQI-------------------------------AVAQQTVVLRALIEDFVKNNTPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A + + + + + ++ K + Sbjct: 114 AEVTARYNALIKDAGGKEYHLHHILVDNEQQAKDLIAKIKA----------GASFEDLAR 163 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F + + T+ P TQ G I + D R+ Sbjct: 164 QYSKDPGSGKNGGDLDWSDPKAYVPEFADAATHLQKGQMTDTPVHTQFGWHIIRVDDVRN 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + Q ++ + + LR NA I Sbjct: 224 ITP--PPLEQVRPQIVQQIQQEKLQAFEEGLRKNAKIQ 259 >gi|22124938|ref|NP_668361.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Yersinia pestis KIM 10] gi|45440627|ref|NP_992166.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Microtus str. 91001] gi|108808639|ref|YP_652555.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Yersinia pestis Antiqua] gi|108811102|ref|YP_646869.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Yersinia pestis Nepal516] gi|145600047|ref|YP_001164123.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Yersinia pestis Pestoides F] gi|149365001|ref|ZP_01887036.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis CA88-4125] gi|162420506|ref|YP_001607415.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis Angola] gi|165926634|ref|ZP_02222466.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Orientalis str. F1991016] gi|165936039|ref|ZP_02224609.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Orientalis str. IP275] gi|166010989|ref|ZP_02231887.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Antiqua str. E1979001] gi|166212996|ref|ZP_02239031.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Antiqua str. B42003004] gi|167399316|ref|ZP_02304840.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421506|ref|ZP_02313259.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423714|ref|ZP_02315467.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468476|ref|ZP_02333180.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis FV-1] gi|218930183|ref|YP_002348058.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Yersinia pestis CO92] gi|229838757|ref|ZP_04458916.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896089|ref|ZP_04511259.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis Pestoides A] gi|229899325|ref|ZP_04514468.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis biovar Orientalis str. India 195] gi|229901331|ref|ZP_04516453.1| Peptidyl-prolyl cis-trans isomerase ppiD [Yersinia pestis Nepal516] gi|270489517|ref|ZP_06206591.1| PPIC-type PPIASE domain protein [Yersinia pestis KIM D27] gi|294504885|ref|YP_003568947.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis Z176003] gi|21957777|gb|AAM84612.1|AE013706_7 putative protease maturation protein [Yersinia pestis KIM 10] gi|45435484|gb|AAS61043.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis biovar Microtus str. 91001] gi|108774750|gb|ABG17269.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis Nepal516] gi|108780552|gb|ABG14610.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis Antiqua] gi|115348794|emb|CAL21748.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis CO92] gi|145211743|gb|ABP41150.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis Pestoides F] gi|149291414|gb|EDM41488.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis CA88-4125] gi|162353321|gb|ABX87269.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis Angola] gi|165916184|gb|EDR34791.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Orientalis str. IP275] gi|165921562|gb|EDR38759.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Orientalis str. F1991016] gi|165989989|gb|EDR42290.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205783|gb|EDR50263.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Antiqua str. B42003004] gi|166960425|gb|EDR56446.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051820|gb|EDR63228.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057884|gb|EDR67630.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681260|gb|EEO77354.1| Peptidyl-prolyl cis-trans isomerase ppiD [Yersinia pestis Nepal516] gi|229687727|gb|EEO79800.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis biovar Orientalis str. India 195] gi|229695123|gb|EEO85170.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701012|gb|EEO89041.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis Pestoides A] gi|262362950|gb|ACY59671.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis D106004] gi|262366870|gb|ACY63427.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis D182038] gi|270338021|gb|EFA48798.1| PPIC-type PPIASE domain protein [Yersinia pestis KIM D27] gi|294355344|gb|ADE65685.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis Z176003] gi|320016339|gb|ADV99910.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 628 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 37/399 (9%), Positives = 105/399 (26%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + +++ F + + SY + +N + I+ + + + Sbjct: 1 MMDNLRAAANNVVLKIILALIMLSFILTGVGSYLIGGSNDY-AAKVNDQDISRAQLEQAM 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +L + + +LI L Q K G+T V Sbjct: 60 QSERGRLQQKLGEQFSVLAANEGYMQQLRQQVLGQLINNVLLDQYARKLGLTVSDEQVKE 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY---LAIQSIWPDVVK------------ 149 Q D + +L +Q+ Q I ++K Sbjct: 120 SIRQIPDFQTGEHFDNNRYLALINQLGYTPEQFAQLQRQQLINQQLLKAFSDTGFVLPIE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + E+ A + K+ + ++ ++ Sbjct: 180 VQAMSALVLQQRDVRLATLDLKALQAEQKVTDEELQAYYDQNKHNFIAPEQMKVSFIAMD 239 Query: 189 DNKLQNQGFVQKRIKDAE-------------------------------ESRLRLPKDCN 217 +Q+ V + A + + Sbjct: 240 AAAMQSNITVTEEDIAAYYDQNRSSYTQPERRNYSVIQFKTEVEAKAALDELKKGADFAV 299 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ I + G+ +L + + + ++ + G + + D + Sbjct: 300 IAKEKSTDIISRNNGGELGWLEPETTPDEVKAANLSEKGQLSDVIKSSVGYLIVRLNDIK 359 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + L+ + K +K+ A Sbjct: 360 PELVKPLSEVHDELAKKLKQEKALDAYYALQQKVNDAAT 398 >gi|291296508|ref|YP_003507906.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Meiothermus ruber DSM 1279] gi|290471467|gb|ADD28886.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Meiothermus ruber DSM 1279] Length = 305 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 31/309 (10%), Positives = 76/309 (24%), Gaps = 28/309 (9%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-----------L 72 + ++ + + A S + T+ IT + R L L Sbjct: 6 LLFLITALGSLAVAQSDPVVATVANTTITKSQLELRFGLYIRDSERQNGLSYSEEALAAL 65 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 +K ++ + E + E +G + V + + + + Sbjct: 66 KKRFLELVARERAIILKAEAAGFAASKDDVQAAVAEVKADFDSEEAFTQALKEAGIPSLE 125 Query: 133 HFKQYLAIQSIWPDVVKNDFML-KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + +++ K + + K + + Y +L Sbjct: 126 VYHTLVYEALTYNAYLEHLLKQLKTSEPALRLLYLVSKSQFALPKRYCSAHIL------- 178 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL 250 + + K + + G F+ L Sbjct: 179 ----VDTAQEAYQVIARLGKGEKFADLARALSKDPGSKEEGGDLGCEPRGTFVAPFELAL 234 Query: 251 KKSQNNTTN--PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 Q ++ P T+ G I + KR + A+ T + + Sbjct: 235 VALQPGESSKVPVKTEFGYHIILL--KRVEAAGFQGFEEVRAELDQTIRNSAVYRLLLWI 292 Query: 309 RSNAIIHYY 317 + I + Sbjct: 293 EKSTPIQLF 301 >gi|49473855|ref|YP_031897.1| peptidyl-prolyl cis-trans isomerase [Bartonella quintana str. Toulouse] gi|49239358|emb|CAF25691.1| Peptidyl-prolyl cis-trans isomerase [Bartonella quintana str. Toulouse] Length = 317 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 32/328 (9%), Positives = 82/328 (25%), Gaps = 67/328 (20%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSR-------------------IRTTINGEVITD 53 +T + + + ++ S + I+G+ IT Sbjct: 3 FNFITLFLTSTLLASTSLGVMAQKSVESASNDLKNLEKASEKTVPPSHVMAVIDGKEITA 62 Query: 54 GDISK---RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 G + + I ++ + + ++ + + + GI Sbjct: 63 GQLDELALEINPNLVRFPDEQRRITVLKAYLDMQVLAKAAISKGIDKTEAYDKR------ 116 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + + K + + + ++E NK+ Sbjct: 117 ------------------------MAVMRDNVLQQLYFKQMIVDQISDTDLETLYNKEVA 152 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 E R +L +K + + + +K ++ Sbjct: 153 ALPKEDEVKARHIL-----------VKTKKEAEAIIKRLSKGESFEAVAKKNSTDGSAAV 201 Query: 231 IGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 G Y + F++ T P + G I + D+R + + Sbjct: 202 GGDLGYFSHGQMVKPFEDAAFGLKVGEYTKKPVESPFGWHVIKVEDRRLKQP--PIFDDV 259 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I++ + + LR+ + Y Sbjct: 260 KEMLRTQLIKERYQKLIVDLRNTIDVKY 287 >gi|322508232|gb|ADX03686.1| Peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii 1656-2] Length = 414 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 35/293 (11%), Positives = 94/293 (32%), Gaps = 19/293 (6%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIA----LLKLQK----INGELEKIAVQELIVETL 85 + + ++ VI D+ + +A L+ QK L+ + +LI+ Sbjct: 3 SFAQPTDEVVAIVDNSVILKSDLEQGMAEAAHELQAQKKEVPPQQYLQFQVLDQLILRQA 62 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLS--AEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + ++++K GI D ++N ++ A +G + + +A Sbjct: 63 QLEQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQKLDAIAPGTYENLRSRIAEDLA 122 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + + M + + ++ + + + I + Q V K ++ Sbjct: 123 INRLRQQQVMSRIKISDQDVDNFLKSPQGQAALGNQAHVIHMRISGDNPQEVQNVAKEVR 182 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYV 262 L N L+K ++ V + SD+ + + TT+ Sbjct: 183 SQLAQSNDL----NALKKLSTATVKVEGADMGFRPLSDIPAELAARITPLQDGQTTDLIS 238 Query: 263 TQKGVEYIAICDKRD----LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + GV + + +++ ++ Q + ++ + + + Sbjct: 239 VRDGVHVLKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENAKQIIDSIYKR 291 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 17/157 (10%), Positives = 52/157 (33%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + ++K +T I +++ + ++ I + + Sbjct: 246 LKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENAKQIIDSIYKRLKAGEDFAILAATY 305 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 ++ G ++ + P+F + + + + P+ TQ G + + DKR+ Sbjct: 306 SNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHILQVTDKREKDM 365 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + +++++R+NA + Sbjct: 366 THEYQERMARQILGERQFNTEIDSWLREVRANAYVEI 402 >gi|323526035|ref|YP_004228188.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1001] gi|323383037|gb|ADX55128.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1001] Length = 259 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 34/278 (12%), Positives = 76/278 (27%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I I L + Q+ +L+ +EL+ + QE + G+ Sbjct: 25 IAVVNGTPIPKSRADALIDQLVHQGQQNTPQLQMAVREELVNREVLMQEALRRGL----- 79 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + + ++++ Sbjct: 80 -------------------------QNRPDIKAQVAVAQQTVVLRALIEDFVKKNAPTDA 114 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +K+ +EY + +L +++ KD + Sbjct: 115 EVTARYNALIKDAGGKEYHLHHIL-----------VDNEQQAKDLIAKIKGGASFEELAK 163 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F + + ++ P TQ G I + D R Sbjct: 164 QYSKDPGSGKNGGDLDWSDPKAYVPEFADAATHLQKGQMSDTPVHTQFGWHIIRVDDVRS 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + Q ++ + + LR NA I Sbjct: 224 ITP--PPLEQVRPQIVQQIQQEKLQAFEEGLRKNAKIQ 259 >gi|182420516|ref|ZP_02643225.2| foldase protein PrsA [Clostridium perfringens NCTC 8239] gi|182624265|ref|ZP_02952050.1| foldase protein PrsA [Clostridium perfringens D str. JGS1721] gi|177910483|gb|EDT72856.1| foldase protein PrsA [Clostridium perfringens D str. JGS1721] gi|182380295|gb|EDT77774.1| foldase protein PrsA [Clostridium perfringens NCTC 8239] Length = 325 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 38/314 (12%), Positives = 88/314 (28%), Gaps = 21/314 (6%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING------------ 70 +V A+ T+NGE IT G++ + + Q + Sbjct: 2 FSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFAQMKSQYGDKYMDDPQVA 61 Query: 71 ----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 + + VQ L+ + + E +K GI + + N D + Sbjct: 62 QQILQQRQSVVQSLVTDKVLVAEADKLGIKPSEEDIKKKVDEQFENIKKGMGDNFDKALE 121 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + + + + +I + K V + Sbjct: 122 AEGYTEDTFKEFLKNQVIAEATVEYATKDVKVSDEDIKKYYDENKQQFVVKAGADVKHLL 181 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 P + + + + + + L K + + ++G+ Y + Sbjct: 182 FPTEEEAQKAYDEIQSGKT--TFDDLFNKYEKNKDPKKEPIAENLGRVDYNNSNFDKDFM 239 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIA---ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 + L + P + G I I DK E K + + K ++ + Sbjct: 240 EGLKGLKDGEISKPVKSSFGYHIIKATNITDKETQLTEEQAKEQIISILENQKKKEAYQK 299 Query: 304 YVKKLRSNAIIHYY 317 +++ + + + Y Sbjct: 300 DLEQWKKDLNVKVY 313 >gi|301597698|ref|ZP_07242706.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB059] Length = 344 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 17/157 (10%), Positives = 52/157 (33%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + ++K +T I +++ + ++ I + + Sbjct: 176 LKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENAKQIIDSIYKRLKAGEDFATLAATY 235 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 ++ G ++ + P+F + + + + P+ TQ G + + DKR+ Sbjct: 236 SNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHILQVTDKREKDM 295 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + +++++R+NA + Sbjct: 296 THEYQERMARQILGERQFNTEIDSWLREVRANAYVEI 332 >gi|300813778|ref|ZP_07094088.1| peptidylprolyl isomerase PrsA3 family protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512121|gb|EFK39311.1| peptidylprolyl isomerase PrsA3 family protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 249 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 38/284 (13%), Positives = 83/284 (29%), Gaps = 47/284 (16%) Query: 40 SRIRTTINGEVITDGDISKRIAL----LKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 ++I +NG+ IT D + I L+ +N + K ++ELI L Q+ ++G Sbjct: 4 NKILAEVNGKKITGEDYNIFINSINPKLREHLVNSDQNKEVIEELIHHELIYQDAIENGK 63 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + A +S+ + + Sbjct: 64 DKEEEF-------------------------------QKVLDQAKKSLLLNYTLGKLLSN 92 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 E EI K ++ +R + D K+ ++ Sbjct: 93 IEVTEKEIEDFYNNHKEHFTKDQTVRASHILVDD---------LKKAEEIYNRIKDGADF 143 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274 + + ++ + G + +F++ + P TQ G I + + Sbjct: 144 SKEAKNNSTCPSKENGGDLGIFSRGQMVKEFEDACFNMEVGEVSKPVKTQFGYHIIKLVE 203 Query: 275 KRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + ++ K ++ + + LR + I Y Sbjct: 204 KNKAQEMTLEESRDHIIEDIRRQKEQEIYKDKISSLREKSQIKY 247 >gi|23009953|ref|ZP_00050812.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Magnetospirillum magnetotacticum MS-1] Length = 218 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 20/181 (11%), Positives = 48/181 (26%), Gaps = 15/181 (8%) Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Y + + + ++ + + ++ E R +L Sbjct: 28 YFRDKLLLDEYLEREAKKAVTPEAAKALYDQTVKSMKPEEEVHARHIL-----------V 76 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K + + G + + + F + K + Sbjct: 77 ESEDEAKKIAARIKGGEDFAKVAAELSKDPGSKTEGGDLGWFTQERMVKPFADAAFKLAP 136 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 ++P TQ G + + +KR + Q K + + + KLR A + Sbjct: 137 GQVSDPVKTQFGWHVLRVEEKRTKPV--PTFDEMKEQIDQYLTRKAQQDTIVKLREAAKV 194 Query: 315 H 315 Sbjct: 195 E 195 >gi|220932053|ref|YP_002508961.1| peptidyl-prolyl cis-trans isomerase [Halothermothrix orenii H 168] gi|219993363|gb|ACL69966.1| peptidyl-prolyl cis-trans isomerase [Halothermothrix orenii H 168] Length = 495 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 47/330 (14%), Positives = 95/330 (28%), Gaps = 19/330 (5%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLI-IFCIVPIVSYKSWAMSSRI----RTTINGEVI---T 52 M K+ I + VL F S A SS I +N I T Sbjct: 1 MFKKLRNYSKYIIYFVVAALVLTGAFLGFGAYRNSSPAASSVIDPNYIARVNDTSIPRET 60 Query: 53 DGDISKRIALLKLQKINGEL--EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 + A ++ + +LI L QE EK G +SN + + Sbjct: 61 YYQYLQNNAQFAQLSREQQVPYRLNLLNQLIERELLLQEAEKLG--IESNPTDKEVKEQI 118 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + L + + N + + ++ ++ Sbjct: 119 NKMLEAYNITEEKLKELLDSRGIKYEDFKEDIRHNIKTSNIIRKTIEHTYKGVEVSEDEI 178 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDV 229 + + + + K + + ++K +K+ EE K++ K+ D Sbjct: 179 REAYEKVRPALIAVNIEGEKKKEARAKIEKALKELEE----GKAFGEVAAKYSDLKLKDG 234 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAY 287 +G + + T++ +KG + + DK+ + Sbjct: 235 DLGFIGRNNGFLPQEVLDKAFELEKGKTSDIIEGEKGYYIVKVIDKKLARGEEFEKSREE 294 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 L Q K + +++ + A I Y Sbjct: 295 LKDQLLKQKQNRTYQNWLRDTKKQADIEIY 324 >gi|222528654|ref|YP_002572536.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor bescii DSM 6725] gi|222455501|gb|ACM59763.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor bescii DSM 6725] Length = 335 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 38/318 (11%), Positives = 95/318 (29%), Gaps = 20/318 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI----- 60 + + VL+I I + +R +NGE IT + + Sbjct: 1 MDKRTKIVLFSIAAVVLLIILIGVTPEIVKYVDENRAVAIVNGEKITKKEFAINYRSQIN 60 Query: 61 ----------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 + + ++++ + LI+ ++ Q+ K IT S Q Sbjct: 61 YYGIDKTFLSQKVGDKTYEQQIKENVLDGLIIRQIELQQARKRNITLTSAEKKAIDQQIE 120 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + S + + Q I +V + N + + Sbjct: 121 QYKSDSQSGAEF--RQYLQTIGATENEYKDQVIKSKIVSKLYDEITKNQKATDAEVENYY 178 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DV 229 + ++ N + + +K+ ++ + +K++ + Sbjct: 179 SSHKSDFVEVKASHILFKVNDSKEEAAKKKKAEEILQMIKDGQNFEKLAQKYSEDENTKQ 238 Query: 230 SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 G Y + + +F++ + +N T G I + DK+ L +K + Sbjct: 239 KGGDLGYFRKGQMVKEFEDAAFSLNIGEISNIVKTSYGYHIIKVTDKKQLSLNE-VKDEI 297 Query: 289 SAQNTPTKIEKHEAEYVK 306 + K +++ ++ Sbjct: 298 KSTIESQKKDEYYQSLLE 315 >gi|319407575|emb|CBI81225.1| peptidyl-prolyl cis-trans isomerase [Bartonella sp. 1-1C] Length = 308 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 32/287 (11%), Positives = 73/287 (25%), Gaps = 42/287 (14%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91 + + S + I+G+ IT G + + EI Sbjct: 32 AAEKPVPLSHVIAVIDGKNITAGQLDE---------------------------LALEIN 64 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 + I ++ + A+ + + + + K Sbjct: 65 PNLIRVSDEKRRVTVLKAYLDMQALAKAALQKGLDKTEAYDKRMAIMRDNILQQLYFKEM 124 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + K + +++ +K+ E R +L ++ + + + Sbjct: 125 VVDKIADADVKALYDKEIAALPKEDEIKARHIL-----------VKTKEEAEKVIKRLHK 173 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEY 269 +K ++ G Y + F+ T P + G Sbjct: 174 GENFEEIAKKDSTDGSSAVGGDLGYFSRGQMVKPFEEAAFNLKVGEYTKKPVESPFGWHV 233 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I I D+R + + I +H + LR + Y Sbjct: 234 IKIEDRRLKQP--PVFDDVKDVLRTQLIREHYQTLITDLRGKINVEY 278 >gi|91783535|ref|YP_558741.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia xenovorans LB400] gi|91687489|gb|ABE30689.1| Putative peptidyl-prolyl cis-trans isomerase [Burkholderia xenovorans LB400] Length = 259 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 80/278 (28%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I I L + Q+ +L+ +EL+ + QE + G+ + Sbjct: 25 IAVVNGTPIPKARADALIDQLVHQGQQNTPQLQMAVREELVNREILMQEALRRGLPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + DF+ + Sbjct: 85 IKAQI-------------------------------AVAQQTVVLRALIEDFVKNNTPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A + + + + + ++ K + + Sbjct: 114 AEVTARYNALIKDAGGKEYHLHHILVDNEQQAKDLIAKIKA----------GASFEDLAK 163 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F + + T+ P TQ G I + D R+ Sbjct: 164 QYSKDPGSGKNGGDLDWSDPKAYVPEFADAATHLQKGQMTDTPVHTQFGWHIIRVDDVRN 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + Q ++ + + LR NA I Sbjct: 224 VTP--PPLEQVRPQIVQQIQQEKLQAFEEGLRKNAKIQ 259 >gi|260584542|ref|ZP_05852288.1| foldase protein PrsA [Granulicatella elegans ATCC 700633] gi|260157565|gb|EEW92635.1| foldase protein PrsA [Granulicatella elegans ATCC 700633] Length = 316 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 30/298 (10%), Positives = 84/298 (28%), Gaps = 22/298 (7%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 + + ++ + + + T +T + K + + +Q L+++ Sbjct: 8 MLAVASTLALAACSNNQSAVATSKAGNVTQEEFYKALK--------ATSGEQTLQRLVLQ 59 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + + + D + N + Sbjct: 60 KVLENDA------KDKKALEEEAKTEVANQVKQYGGEDALKAVLARSGFTSVDAYRDTVY 113 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++ + E+ + + ++ + + + +K+ + Sbjct: 114 LNKLITAAVKKSTTFSDEEVQKYYDSWEPKATAQ---HILIGVSQNASDEEKAEAKKKAE 170 Query: 204 DAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-P 260 D + ++ ++ + GK SD+ +F + T P Sbjct: 171 DLIKQLKDGADFDTLAKENSTDKTSAENGGKIGPFKRSDMVKEFADAAYGLKVGEITEEP 230 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY--VKKLRSNAIIHY 316 +TQ G I + DK + G +++ L + K++ + V L NA + Sbjct: 231 VLTQYGYHVIKLVDKPEKGSLSDVRSTLEDELLAEKLKDTATIHSVVSSLVKNADVKI 288 >gi|304315716|ref|YP_003850861.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777218|gb|ADL67777.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 323 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 30/287 (10%), Positives = 78/287 (27%), Gaps = 18/287 (6%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQEIEK 92 S ++ I ++G+ IT + +K Q + I Q + Sbjct: 43 SCGVNKNIVAKVDGQDITLKEYQDSFNQVKAQIESDPQYTKDIWNQNYNEQKFIDVVENS 102 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 + + + T E + ++ K+ + +V + Sbjct: 103 VLDNLILEKLLLKEAEKEKFTATDKEITDEYNAEKATNSKVTKEMAKDNVLINKLVDSW- 161 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 + E K+ ++ +K + + + Sbjct: 162 TKNVKVTDSEAEKYYNDNKSQFEVVKASHILVSD------------EKTANEIYDKLQKG 209 Query: 213 PKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 ++++ + G+ + +F+N + P TQ G I Sbjct: 210 ANFAELAKQYSIDTSTKDNGGELGEFTRGTMVTEFENAAFALKPGEISKPVKTQYGYHII 269 Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + +K+ + + TK + + + L+ A I + Sbjct: 270 K-SEGKTTKSFNDVKSSIISYLENTKKQNIFNQKSEALKKAAKIEKF 315 >gi|294635328|ref|ZP_06713825.1| peptidylprolyl cis-trans isomerase D [Edwardsiella tarda ATCC 23685] gi|291091304|gb|EFE23865.1| peptidylprolyl cis-trans isomerase D [Edwardsiella tarda ATCC 23685] Length = 626 Score = 90.1 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 35/399 (8%), Positives = 109/399 (27%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + + ++I F + + +Y ++G+ I+ + + + Sbjct: 1 MMDNLRAAANHVVLKVILALIIISFVLTGVGNYLIGGSGDY-AAKVDGQEISRAQLEQAV 59 Query: 61 ALLKLQKING----------------ELEKIAVQELI-----------------VETLKK 87 + + EL + + +I +K+ Sbjct: 60 QNERSRLQQQLGDQFSVLAGNEGYMKELRQQVLSRMIDDVLLDQYAKKLNLAISDAQVKE 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS----- 142 D++ N +++ GL+ + ++ + +Q + + + A Sbjct: 120 AIRTLPYFQTDNHFDNAKYLEMVARLGLTPDSYAQLMRQQLVTQQLIQGFTATGFTLPSE 179 Query: 143 --------IWPDVVK------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI- 187 + ++ M + + E+ Q+ +N + +R + Sbjct: 180 VSSLAALTMQQRLINLATIDIKQLMPQQKVSDAELQGYYQQHQNSFIAPEAVRVSYIEMD 239 Query: 188 ------------------------------PDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + Q + K E + Sbjct: 240 AAAINDKMTVSDAEISAYYDQHKRSFTQPERNKYSVIQVKSEAEAKAIAEQLAKGADFAT 299 Query: 218 KLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ +S I + G+ ++ + N ++ + P + G + + D + Sbjct: 300 LAKEHSSDIISRKNGGELGWMEPESTPQEILNAKLTTKGQVSAPIASSVGYLIVRLDDMQ 359 Query: 277 DL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++A ++ + K +K+ A Sbjct: 360 PAVIKPLSEVRAAIADKVKQQKSLDAFYAMQQKVSDAAT 398 >gi|187923910|ref|YP_001895552.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia phytofirmans PsJN] gi|187715104|gb|ACD16328.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia phytofirmans PsJN] Length = 259 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 80/278 (28%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I I L + Q+ +L+ +EL+ + QE + G+ + Sbjct: 25 IAVVNGTPIPKARADALIDQLVHQGQQNTPQLQTAVREELVNREILMQEALRRGLPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + DF+ + Sbjct: 85 IKAQI-------------------------------AVAQQTVVLRALIEDFVKNNTPSD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A + + + + + ++ K + + Sbjct: 114 AEVTARYNALIKDAGGKEYHLHHILVDNEQQAKDLIAKIKA----------GASFEDLAK 163 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +F+ + G + P+F + + T+ P TQ G I + D R+ Sbjct: 164 QFSKDPGSGKNGGDLDWSDPKAYVPEFADAATHLQKGQMTDTPVHTQFGWHIIRVDDVRN 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + Q ++ + + LR NA I Sbjct: 224 ITP--PPLEQVRPQIVQQIQQEKLQAFEEGLRKNAKIQ 259 >gi|256419700|ref|YP_003120353.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chitinophaga pinensis DSM 2588] gi|256034608|gb|ACU58152.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chitinophaga pinensis DSM 2588] Length = 478 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 25/287 (8%), Positives = 82/287 (28%), Gaps = 15/287 (5%) Query: 5 VFTSLSDFIKLLTTYFV-LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63 +F L+ + + + + + + + ++ +I + ++I D+ + L Sbjct: 8 LFLKLTALVNMNRIFALSAGTLLLCQVAVAQQKMVADKIAAIVGDKIILRSDVEGEMVNL 67 Query: 64 KLQKI----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 + ++++I + + + E+ + + V+ R Sbjct: 68 SRNNADGSLPPNAPCMIMEQIISQKVMVMQAERDSLPVSESDVDGQIENRIRYFQDVYGS 127 Query: 120 FSSFLDKQGIGDNHFKQYLAIQS---IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + G K+ + +++ E+ + +++ Sbjct: 128 PEKMKEVTGYSIYQLKERFRQPIKEGLLAKAMQDKITSSVKVTPSEVKKYFDAIPKDSLQ 187 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK--- 233 Y + I + Q I E + ++ + + + A + K Sbjct: 188 YYESELEIGQIVIQPKATKEMDQYAIDRLLEFKKQVQEKTSDFGRLAILYSEDPGAKENK 247 Query: 234 ----AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 + + +N ++P +Q G I ++ Sbjct: 248 GVYILNRNDKQWDADFLAASFRLKENEISSPIKSQFGYHLIQCIKRQ 294 >gi|294775653|ref|ZP_06741161.1| putative D-tyrosyl-tRNA(Tyr) deacylase [Bacteroides vulgatus PC510] gi|294450497|gb|EFG18989.1| putative D-tyrosyl-tRNA(Tyr) deacylase [Bacteroides vulgatus PC510] Length = 452 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 31/316 (9%), Positives = 93/316 (29%), Gaps = 16/316 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQKINGEL 72 + T + L++ + Y + + + E I D+ A + +K +G+ Sbjct: 1 MCTKVYALMLMLFAVVSVYGQDNVIDEVVWVVGDEAILKSDVENERLNAQYEGRKFDGDP 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 I ++L ++ L + I + + + Sbjct: 61 YCIIPEQLAIQKLFLHQAAIDSIEVSEQEIISDVERRTNWLIDQIGSKEKVEEYYNKTST 120 Query: 133 HFKQYLAIQSIWPDV---VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 ++ L ++ + E+ + + ++ + + I Sbjct: 121 QIREMLRENIRDGKTVQKMQQQIVGDIKITPAEVRRYFKDLPQDSIPFIPTQVEVQIITM 180 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-----IGKAQYLLESDLHP 244 Q +++ K + R+ A + G+ ++ ++L P Sbjct: 181 EPKIPQEEIERVKKTLRDYTERVTSGEIAFSTLARLYSEDEGSRRRGGELGFMGRAELVP 240 Query: 245 QFQN--LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT-PTKIEKHE 301 ++ N + N + ++ G I + +KR G+ ++ + K + Sbjct: 241 EYANVAFNLQDPNKVSKIVESEFGFHIIQLIEKR---GDRINTRHILLKPKVDEKDLEAA 297 Query: 302 AEYVKKLRSNAIIHYY 317 + + ++ + Sbjct: 298 LLRLDSIANDIRNEKF 313 >gi|162146617|ref|YP_001601076.1| peptidylprolyl isomerase [Gluconacetobacter diazotrophicus PAl 5] gi|161785192|emb|CAP54738.1| Peptidylprolyl isomerase [Gluconacetobacter diazotrophicus PAl 5] Length = 308 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 30/276 (10%), Positives = 71/276 (25%), Gaps = 50/276 (18%) Query: 43 RTTINGEVITDGDISKRIALLKLQK---INGELEKIAVQELIVETLKKQEIEKSGITFDS 99 ++NGE I D+ + A + Q + + + +LI + + Sbjct: 50 VASVNGEDIHLNDVRQAAANMPAQLRQLPPNMIFPMLLNQLIDQKAIQAAAT-------- 101 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + A+ ++ + + Sbjct: 102 ----------------------HAGLDKQPDVQQQMHAAAMNALQNAYLSQQVTPTLTDA 139 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 ++ + E R +L + KD + Sbjct: 140 AVQAYYTQHYANKKPEAEIHARHIL-----------VATEAEAKDVIKQLKAGADFGALA 188 Query: 220 EKFA--SKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTN-PYVTQKGVEYIAICDK 275 K + + G + + D+ P F + + + P TQ G I + D Sbjct: 189 TKLSTDKASAKQNGGDLGWFKKGDMLPAFSDAAFAMKPHTFSQTPVHTQYGWHVIEVLDT 248 Query: 276 R--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 R D+ A++ + + + + V ++ Sbjct: 249 RTADVPKLDAVRDEIRQKLIQQGVRDAVEKAVAGVK 284 >gi|229496559|ref|ZP_04390273.1| peptidyl-prolyl cis-trans isomerase family protein [Porphyromonas endodontalis ATCC 35406] gi|229316456|gb|EEN82375.1| peptidyl-prolyl cis-trans isomerase family protein [Porphyromonas endodontalis ATCC 35406] Length = 461 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 99/308 (32%), Gaps = 17/308 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KING 70 + L + + I V + + + + + + E I D+ + L Q +++ Sbjct: 4 LNSLRPWILAIGLSCVSMCTLLAQQVIDEVVWMVGDEAILRSDVEYQKLRLLSQGVRLDA 63 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 E ++L V+ L + + IT D +N + + + + Sbjct: 64 NSECALPEQLAVQMLFLNQAKIDSITVDDAMINRYVEANIQGMIAEVGSKEKLEEYFNKS 123 Query: 131 DNHFKQYLAIQSIWP---DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 ++ Q+ ++ + EI A + ++ R + I Sbjct: 124 LTQIREDQRRQAKSGEIVRAMQQKLVSNISVSPSEIRAYFASIPTDSLPYIPTRLEVQKI 183 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-----SIGKAQYLLESDL 242 + + + + E + A + + G+ ++ ++ L Sbjct: 184 VRKPIVKLSEIDRIKQKLREYSEEVNSGKTSFSTLARLYSEDTRTALNGGEYGFVAKTSL 243 Query: 243 HPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 +F +L NN + +++G + I +KR G++ ++ P ++ Sbjct: 244 ESEFARILFDMPNNKRVSPIIQSEEGYHIVQIIEKR---GDLINFRHIL--LRPKVADEA 298 Query: 301 EAEYVKKL 308 V KL Sbjct: 299 LETEVTKL 306 >gi|312796410|ref|YP_004029332.1| peptidyl-prolyl cis-trans isomerase [Burkholderia rhizoxinica HKI 454] gi|312168185|emb|CBW75188.1| Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) [Burkholderia rhizoxinica HKI 454] Length = 260 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 85/296 (28%), Gaps = 50/296 (16%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAV--QELIV 82 + V+ ++A + +NG I + L Q + + +EL+ Sbjct: 10 AALAGCVAAPAFAQN---IAVVNGTPIPKARADALVKELTRQGQQDSPQLQVMVREELVN 66 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 L +E + GI + LA QS Sbjct: 67 RELLMEEALRRGIANRPDVKAQI-------------------------------ALADQS 95 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + +DF+ + EI A +++ + +PD + Sbjct: 96 VVIRALIDDFLKNNKPSDDEIKARYEQLIKQAGGGNELHLHHILVPDEQQAK-------- 147 Query: 203 KDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNT-TN 259 + + ++ + + G + P+F + K + + Sbjct: 148 -ELIAKIKAGASFEDLAKQHSKDPGSAKNGGDLDWANPQSYVPEFADAAGKLKKGEVTST 206 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 P TQ G I + D R + + AQ ++ ++ +L NA I Sbjct: 207 PVHTQFGWHIIRLDDSRAIQP--PPLDQVKAQVAQQLTQEKLQQFNAELHKNAKIQ 260 >gi|71907562|ref|YP_285149.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dechloromonas aromatica RCB] gi|71847183|gb|AAZ46679.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dechloromonas aromatica RCB] Length = 628 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 38/401 (9%), Positives = 89/401 (22%), Gaps = 99/401 (24%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M V + I + + + F + SY A S +I IT + + Sbjct: 1 MFDAVRN--NKRIVQVFLALITLPFAFFGVDSYMRSAGSGGDVASIGDIKITQQQFQQTL 58 Query: 61 ALLKLQKI-------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY--- 104 + + N E + + +LI + L E K ++ ++ + Sbjct: 59 REQQERLRTQLGAQFDAKMLDNPEARRAILDDLINQRLLLVEASKKHMSVSNDAIRQTIG 118 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK--------------- 149 + S E + + L QG+ F+ L + Sbjct: 119 AIEAFKVDGKFSTERYEAALRAQGMSPTGFEAQLRQDLTLQQLASAVGQSGLVARSVSDR 178 Query: 150 ------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIR---------- 181 ++ K + + + + Sbjct: 179 LLSLQTEKREVMEYRFSLESYLDKVKLADDAVRKFYDENGQQFQMPEQAKAEYVVLSMDS 238 Query: 182 ---------TVLFSIPDNKLQNQGFVQKRIKDAE---------------------ESRLR 211 + + D ++R E R Sbjct: 239 IGSQLSVSDAEIKAWYDGHKDRFQAAEERRASHILLASEKLGKDKAKAKAEELLAEIRKN 298 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269 + +K + G + + F++ + + G Sbjct: 299 PAAFADLAKKNSDDPGSASKGGDLGFFGRGMMVKSFEDTAFGLKDGEISGVVESDFGFHI 358 Query: 270 IAICDKRDLGGE--IALKAYLSAQNT----PTKIEKHEAEY 304 I + + +K + A+ K + + Sbjct: 359 IKVTGIHAAKEKPLADVKGEIEAELKKTGSSRKFAEAAEAF 399 >gi|165933466|ref|YP_001650255.1| peptidyl-prolyl cis-trans isomerase [Rickettsia rickettsii str. Iowa] gi|165908553|gb|ABY72849.1| peptidyl-prolyl cis-trans isomerase [Rickettsia rickettsii str. Iowa] Length = 282 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 82/301 (27%), Gaps = 38/301 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + +IF V ++S ++A ++ T G + I K + ++ Sbjct: 4 LSVIFLSVSMLSGIAFADKDKVVATYKGGEVKASQIMKEFKPQLNLQSGETIKN------ 57 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 ++ N L E+ + + Sbjct: 58 --------------FDDFPPQDQEKLIKIYVNNLLLKEEVAKSNITSSKEFQEKLENAKN 103 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +++ N + + NK + + + +L QK Sbjct: 104 QLAQQELLANYIKSNITDKMFDDEYNKYVVNLKGKEQIKVAHIL-----------VKSQK 152 Query: 201 RIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL---LESDLHPQFQNLLKK-SQN 255 D + + E+ + K + G Y+ L P+F+ N Sbjct: 153 EANDIKTKLSKGGNFTKLAEELSLDKASASNGGVIGYILLNQPGQLVPEFEKKAFALKVN 212 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + +K+ + I K + +Y+ L + A + Sbjct: 213 EVSTPVKTDFGWHIIKVLEKKPVP--IPTKEEAKVTIDNILAAEILKKYIADLEAKANVK 270 Query: 316 Y 316 Sbjct: 271 I 271 >gi|170760531|ref|YP_001788878.1| peptidylprolyl isomerase [Clostridium botulinum A3 str. Loch Maree] gi|226712004|sp|B1KTE0|PRSA_CLOBM RecName: Full=Foldase protein prsA; Flags: Precursor gi|169407520|gb|ACA55931.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum A3 str. Loch Maree] Length = 335 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 102/332 (30%), Gaps = 22/332 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALL 63 S + +L ++ F +V A + +NGE I D+ + R + Sbjct: 1 MRSAKKLLSVLCLGVFILTFTACDMVEKTPEAKAKSTIAKVNGEKIQRKDLDENPRFKQV 60 Query: 64 KLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 Q E + + ELI E + Q+ ++ + +N Sbjct: 61 VSQMKMQYGEEFEKSEQGKEVIKEQKSQILDELITEKVLLQKGKELKVIPKDEELNKEAD 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + + ++ K+ L V++ +++E + Sbjct: 121 KKVNEIKAVYNNDEKKFEETLKSTGFTKETLKEYLKDQIVIEKVINEATKGVKVEDKDAQ 180 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + + K++K +++ K ++ + SK Sbjct: 181 KYYNENQSMFTEKPNTMNVSHILVKTEDE--AKKVKKRLDAKEDFAKVAKEVSQDGSKDK 238 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALK 285 +G Y + + + + +NP TQ G I I K++ + A+K Sbjct: 239 GGLLGDISYSDSNLDPTFLKAAIALKEGAISNPVHTQFGYHIIKINSKKEYPVKKFDAVK 298 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + Q K ++ + +++ + + I Y Sbjct: 299 EDIKKQLKQEKQQEAYTKKIEEWKKASKIKIY 330 >gi|304439703|ref|ZP_07399603.1| peptidyl-prolyl cis-trans isomerase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371809|gb|EFM25415.1| peptidyl-prolyl cis-trans isomerase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 261 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 32/290 (11%), Positives = 79/290 (27%), Gaps = 47/290 (16%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQELIVETLKK 87 S+ M+ I +N IT+ D++ ++ L + V ELI + + Sbjct: 5 SHIGGNMNKEILAKVNDREITNEDLNIFLSQLDPNTRMYFTQNNMMDQVVDELIYQEMIY 64 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E + G+ D + V +++ Sbjct: 65 MEAIEKGMDKDEDFVK-------------------------------VLEKTKETLLKSY 93 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + ++ K+ + + D + + +E Sbjct: 94 ALGKLLETVEITDEDLKNYYDNHKDNFKNNASVEASHILVEDESVAK---------EIKE 144 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKG 266 +++++ + G + + +F++ ++P TQ G Sbjct: 145 KLNNGADFKELAKEYSNCPSKENGGNLGVFTKGQMVKEFEDAAFNMGVGEISDPVKTQFG 204 Query: 267 VEYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I + +K D K + K + V++L + Sbjct: 205 YHIIKVTNKNDESVRTFEEAKPDIERLVRREKEKDLYKHTVERLYKKYNV 254 >gi|78066682|ref|YP_369451.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. 383] gi|77967427|gb|ABB08807.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. 383] Length = 260 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 83/278 (29%), Gaps = 47/278 (16%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I +A L + Q + +L++ QEL+ + QE + GI + Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIREGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + F+ K + Sbjct: 85 VKAQI-------------------------------AVAQQTVVLRSMIESFLKKNQPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A + + + + + + K + + Sbjct: 114 AEVKARYDDLVKGAGGNREYHLHHILVDNEQQAKDLIAKIK---------AGAKFEDLAK 164 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F +K + T+ P TQ G I + D RD Sbjct: 165 QYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDTPVKTQFGWHIIRVDDIRD 224 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + AQ +++ + + LR A I Sbjct: 225 IAP--PPFDQVKAQIAQQLVQQKLQAFEEGLRQQAKIQ 260 >gi|288929626|ref|ZP_06423470.1| peptidyl-prolyl cis-trans isomerase, PPIC [Prevotella sp. oral taxon 317 str. F0108] gi|288329131|gb|EFC67718.1| peptidyl-prolyl cis-trans isomerase, PPIC [Prevotella sp. oral taxon 317 str. F0108] Length = 458 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 28/296 (9%), Positives = 80/296 (27%), Gaps = 16/296 (5%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQ 88 + ++ + + E I D+ + + K G + ++L ++ L Sbjct: 23 PAVPESSVVDEVIWVVGDEPILKSDVEAARLQAENEGHKFKGNPDCSIPEQLALQKLFLH 82 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 + + + ++ + + + + +Q + ++ Sbjct: 83 QAAIDSLEVSESEISQGIEEQINYWIQLIGSKEKLEEYRKQTISEMRQAMHDDYKNNRLI 142 Query: 149 ---KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 K + ++ + + ++ + I N V + Sbjct: 143 AMMKEKLVSDVKVSPADVRKYFKDLPADSIPMVPTMVEVEIITQNPKVKTEEVNRIKDQL 202 Query: 206 EESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKK--SQNNTT 258 E R+ K A G+ + + P F + N + Sbjct: 203 REYTDRVTKGETTFATLARLYSEDPGSARQGGELGFTGRAAFDPAFAAVAFNLTDPNKIS 262 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE-KHEAEYVKKLRSNAI 313 T+ G I + DKR G+ ++ + + + + + S+ Sbjct: 263 KIVETEFGYHIIQLIDKR---GDKINVRHILLKPRIAQDDIDRSKARLDSIASDIK 315 >gi|170692424|ref|ZP_02883587.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia graminis C4D1M] gi|170142854|gb|EDT11019.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia graminis C4D1M] Length = 259 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 79/278 (28%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I I L + Q+ +L+ +EL+ + QE + G+ + Sbjct: 25 IAVVNGTPIPKARADALIDQLVHQGQQNTPQLQMAVREELVNREILMQEALRRGLPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + DF+ K + Sbjct: 85 IKAQI-------------------------------AVAQQTVVLRALIEDFVKKNTPSD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A + + + +++ KD + + Sbjct: 114 AEVTARYNALIKDAGGKEYHLHHILVDN----------EQQAKDLIAKIKGGASFEDLAK 163 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F + + + P TQ G I + D R Sbjct: 164 QYSKDPGSGKNGGDLDWSDPKAYVPEFADAATHLQKGQMSETPVHTQFGWHIIRVDDVRS 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + Q ++ + + LR NA I Sbjct: 224 ITP--PPLEQVRPQIVQQIQQEKLQAFEEGLRKNAKIQ 259 >gi|154148224|ref|YP_001407264.1| foldase protein PrsA [Campylobacter hominis ATCC BAA-381] gi|153804233|gb|ABS51240.1| foldase protein PrsA [Campylobacter hominis ATCC BAA-381] Length = 271 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 94/299 (31%), Gaps = 40/299 (13%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQKINGELEKIAVQELI 81 + + +++++ T++G+ ITD D++ +A + + + EL+ + + I Sbjct: 4 VLFTALSLAVAMNLNAKVFATVDGKDITDADLTPMLAGMPGVNFEALPAELQNQVIDKAI 63 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 L E +K+GI D +A Sbjct: 64 DLRLLINEAKKNGIEKDELYKKQL-------------------------------EIAKD 92 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 +I + + EI K K+ + I + + Sbjct: 93 NIALRTWQEKEFNNIKVSDKEIEDFYNKNKDKFIEPASIAASHILVEKEDNAKKIIADLS 152 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN- 259 + + + + + S + G Y ++ + P+F + K + T Sbjct: 153 KLKGDALKKKFAEIAKEKSLDPSG--KQNGGDLGYFVKEQMVPEFGEAANKLKKGELTKT 210 Query: 260 PYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P T+ G I D +D +K ++ K + + +K L+S A I Y Sbjct: 211 PVKTKFGYHIILKNDAKDKKQLDLAEVKDHIKNIVKQEKFQADFEKKIKDLKSKAKIEY 269 >gi|161524535|ref|YP_001579547.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans ATCC 17616] gi|189350709|ref|YP_001946337.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia multivorans ATCC 17616] gi|160341964|gb|ABX15050.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans ATCC 17616] gi|189334731|dbj|BAG43801.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia multivorans ATCC 17616] Length = 260 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 84/278 (30%), Gaps = 47/278 (16%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I +A L + Q + +L++ QEL+ + QE + GI + Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIREGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + +F+ K + Sbjct: 85 VKAQV-------------------------------AVAQQTVVLRAMIENFLKKNQPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A + +++ K+ K + + Sbjct: 114 AEVKARYDDLVKTAGGNREYHLHHIL---------VDSEQQAKELIAKIKGGAKFEDLAK 164 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRD 277 +++ + G + P+F +K + T P TQ G I + D RD Sbjct: 165 QYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDEPVKTQFGWHIIRVDDIRD 224 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + A + AQ +++ + + LR A I Sbjct: 225 VAP--PPFAQVKAQIAQQLVQQKLQTFEETLRQQAKIQ 260 >gi|217970665|ref|YP_002355899.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thauera sp. MZ1T] gi|217507992|gb|ACK55003.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thauera sp. MZ1T] Length = 260 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 78/311 (25%), Gaps = 55/311 (17%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + F L + + + + +NG I +A + Q Sbjct: 1 MKHFPSRLAITLLAGFLALPALAASP--------VAKVNGVAIPGERSDAMLAEQRAQGA 52 Query: 69 N--GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 +L +ELI + QE K G+ ++ Sbjct: 53 PDGEQLRNAVREELIRREVLSQEAGKRGLDKKADVKAQ---------------------- 90 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + + +++ + + + +EY R VL Sbjct: 91 --------MEMARQAILIRAYLQDYVRTNPVDDAELKKEYEAIKGRMGDKEYKPRHVL-- 140 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + + K ++ G+ + + F Sbjct: 141 ---------VETEDQAKAIIARLQGGTAFEEVAKESRDPGSKERGGELGWSNPAMYVKPF 191 Query: 247 QNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + + Q TT P + G I + D RD+ + Q ++ + Sbjct: 192 SDAMVQLQKGKYTTTPVKSDFGYHVIQLDDVRDVQP--PPFEEVKPQLQQRLQQQKIERH 249 Query: 305 VKKLRSNAIIH 315 V LR A + Sbjct: 250 VLDLREKAKVE 260 >gi|297588598|ref|ZP_06947241.1| peptidyl-prolyl cis-trans isomerase [Finegoldia magna ATCC 53516] gi|297573971|gb|EFH92692.1| peptidyl-prolyl cis-trans isomerase [Finegoldia magna ATCC 53516] Length = 250 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 83/286 (29%), Gaps = 46/286 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLK---LQKINGELEKIAVQELIVETLKKQEIEKSG 94 +I +NGE I ++ I L Q N E K ELI L + +KSG Sbjct: 4 NKDKILAVVNGEEIKQSEVDNFIKALGYRGAQFNNEEGRKRLTDELINRKLLFFDAKKSG 63 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 + D V + + D + + Sbjct: 64 LDKDEIYVKEV-------------------------------KKQSEELLKDFAMANIIN 92 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + ++ + K+ + + L N + +E Sbjct: 93 SVRVSDEDLKEYYENHKDNFKVQPTFTASHILVESEDLAN---------EIKEKIDNDGD 143 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAIC 273 +++++ G + + +F+N L +++ + P TQ G I I Sbjct: 144 FAELAKEYSTCPSKEQGGDLGTFQQGQMVKEFENALIENEIGDIVGPVKTQFGYHIINIK 203 Query: 274 DKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 DK + + K + K ++ + KL+ I + Sbjct: 204 DKTEGKVKSFEEAKNEVKQTLLQLKQQQAYIDATDKLQKEYKIEKF 249 >gi|150003018|ref|YP_001297762.1| peptidyl-prolyl cis-trans isomerase [Bacteroides vulgatus ATCC 8482] gi|319642196|ref|ZP_07996856.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_40A] gi|149931442|gb|ABR38140.1| peptidyl-prolyl cis-trans isomerase [Bacteroides vulgatus ATCC 8482] gi|317386182|gb|EFV67101.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_40A] Length = 456 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 31/316 (9%), Positives = 93/316 (29%), Gaps = 16/316 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQKINGEL 72 + T + L++ + Y + + + E I D+ A + +K +G+ Sbjct: 5 MCTKVYALMLMLFAVVSVYGQDNVIDEVVWVVGDEAILKSDVENERLNAQYEGRKFDGDP 64 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 I ++L ++ L + I + + + Sbjct: 65 YCIIPEQLAIQKLFLHQAAIDSIEVSEQEIISDVERRTNWLIDQIGSKEKVEEYYNKTST 124 Query: 133 HFKQYLAIQSIWPDV---VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 ++ L ++ + E+ + + ++ + + I Sbjct: 125 QIREMLRENIRDGKTVQKMQQQIVGDIKITPAEVRRYFKDLPQDSIPFIPTQVEVQIITM 184 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-----IGKAQYLLESDLHP 244 Q +++ K + R+ A + G+ ++ ++L P Sbjct: 185 EPKIPQEEIERVKKTLRDYTERVTSGEIAFSTLARLYSEDEGSRRRGGELGFMGRAELVP 244 Query: 245 QFQN--LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT-PTKIEKHE 301 ++ N + N + ++ G I + +KR G+ ++ + K + Sbjct: 245 EYANVAFNLQDPNKVSKIVESEFGFHIIQLIEKR---GDRINTRHILLKPKVDEKDLEAA 301 Query: 302 AEYVKKLRSNAIIHYY 317 + + ++ + Sbjct: 302 LLRLDSIANDIRNEKF 317 >gi|224824918|ref|ZP_03698024.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lutiella nitroferrum 2002] gi|224602589|gb|EEG08766.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lutiella nitroferrum 2002] Length = 244 Score = 89.7 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 76/280 (27%), Gaps = 47/280 (16%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 T+NG IT+ + +A A+Q+LI+ L Q+ + SG+ + Sbjct: 2 AITVNGVEITEAMVQAELANH---ADAPSPRDAAIQQLILHELLLQKAKASGLDTSNEG- 57 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 Q+I + K Sbjct: 58 --------------------------------------QAIGALLDKELAFTPADEATCL 79 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKL-QNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 N + +LF + N K E + + + + Sbjct: 80 AFYNDHPEQFRQGESATASHILFPLGQGDDVANMLAKAKAEGVLAEVQANPSRFADLARE 139 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKRDLG 279 ++ G + P+F+ + ++ P TQ G I + D++ G Sbjct: 140 HSTCPSGQQGGNLGQFGRGQMVPEFEQAVFSTEAGQITPNLVETQFGYHVIQVNDRQSGG 199 Query: 280 --GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 +K L + EY+ KL A I Y Sbjct: 200 QLAFEDIKERLGQYLNEMAGRQMMHEYLSKLVEEAKIEGY 239 >gi|284046681|ref|YP_003397021.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Conexibacter woesei DSM 14684] gi|283950902|gb|ADB53646.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Conexibacter woesei DSM 14684] Length = 390 Score = 89.7 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 35/376 (9%), Positives = 91/376 (24%), Gaps = 69/376 (18%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----- 55 M S V +L + L + + + S +++G IT D Sbjct: 1 MLSSVTKTLRIVLALCAFFVLSFTVAACGGDDESGNDVPSNAVASVDGTPITKADYERWA 60 Query: 56 ----------------------------ISKRIALLKLQKING-------------ELEK 74 + ++ + + ++ + Sbjct: 61 LINAKSPGAQGSPVIIPDPPNYERCIAALERQSRDARARTTPSDSQLRAQCRQVETQIMQ 120 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 ++ LI ++E ++ G++ V + R + D+ SFL + G+ + Sbjct: 121 QSMALLIQADWIEKEADELGVSVSDADVQRTLEETKRQSFPRRGDYESFLRRSGMTERDI 180 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 L IQ + + + +I A + ++ + N Sbjct: 181 LFRLRIQDLSTRITEKIQREAGDVTSAQITAYYNRNRDQFAVPERRDLEIILTRTEAQAN 240 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKK 252 + ++++ + G+ + Sbjct: 241 EAKRA---------IESGTSWAAAARRYSTDALSKGNGGRLLGVARGQQDRALDTAAFNA 291 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPT----KIEKHEAEYVK 306 + P Q G + + + + K+ E+ + Sbjct: 292 RTDVIVGPVRGQFGWYIVRVTRVTPAKQNSLAESREQIRELLRQQGSSRKLNDFAREFQE 351 Query: 307 KL------RSNAIIHY 316 + R +I Sbjct: 352 RWTKLTNCRRGYVIEI 367 >gi|15643674|ref|NP_228720.1| basic membrane protein, putative [Thermotoga maritima MSB8] gi|4981448|gb|AAD35993.1|AE001755_16 basic membrane protein, putative [Thermotoga maritima MSB8] Length = 329 Score = 89.7 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 42/334 (12%), Positives = 99/334 (29%), Gaps = 44/334 (13%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL-- 72 + FV++ + + ++ SS + +NGE IT + + + + ++ Sbjct: 1 MRKLIFVILAVLGISLFG-QATTTSSTVVAIVNGEPITSDLLELEADIDGILRSIAQIDM 59 Query: 73 -------------------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-- 111 ++ + LI + L +Q EK G+ V + Sbjct: 60 RFFNVLTGTEEGLKLLLKYKQEVLNSLIDDLLIQQLAEKEGVGVSDEEVKKEVEARLKET 119 Query: 112 --NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + G++ ED FL G GD + + + K Q Sbjct: 120 VESMGITLEDLDKFLQSAGYGDLETFKKRLHWHVKTQLSLQRLQEKITQNATVTLEEAQN 179 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 N Y I + + ++ + + + A Sbjct: 180 YYNQNKETYRIPAAVHLYRITTED-----KSKMDEVLSKIRKGEDFLEVATQVA------ 228 Query: 230 SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKA 286 + G ++ E L ++++ + P+ ++ + +KR +K Sbjct: 229 TGGDLGWIEEGKLEKDIESVIFDAPEGAILGPFESEGKFVLYKVVEKRSSSYKKFEEVKQ 288 Query: 287 YLSAQNTPTKIEKHEAEYVKKL----RSNAIIHY 316 + + K + ++ K+ + N+ I Sbjct: 289 EIMDKLLADKRNQLWNDWFNKVFEEFKKNSHIEI 322 >gi|269926821|ref|YP_003323444.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermobaculum terrenum ATCC BAA-798] gi|269790481|gb|ACZ42622.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermobaculum terrenum ATCC BAA-798] Length = 380 Score = 89.7 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 35/289 (12%), Positives = 89/289 (30%), Gaps = 27/289 (9%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91 + + + I +NGE IT+ + + + + + ++++ L +QE Sbjct: 80 ASTANFDPNGIVAVVNGEKITNKEFYQEL--------EKRYGQDLISDMVITKLIEQEAR 131 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 K G++ + + Q L +++ G N L Q ++ Sbjct: 132 KRGVSLSNEDMQKALQQ------LQTAFPGQSIEEIAQGQNMTGDQLREQVRVMALLDKM 185 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + E + + + + +R + + R + + Sbjct: 186 LAPQVKVTEQDARNFYNQNPQVFQSQEQLRLGQVVTDNEQQAADAAQALRDGKDLKEVI- 244 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKG-VE 268 + + G Y ++L PQ ++ + + ++P G Sbjct: 245 -------AKYGSKSPERAKKNGDLGYKSLNELDPQLGMTVMQMAVGDVSDPIRLPDGSYA 297 Query: 269 YIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + D++ +K KI +++++L S A I Sbjct: 298 VVKMIDRKGGVQMPFDQVKDRAMELAKQDKINSMIPKFLEELYSKAKIQ 346 >gi|332716317|ref|YP_004443783.1| peptidyl-prolyl cis-trans isomerase [Agrobacterium sp. H13-3] gi|325063002|gb|ADY66692.1| peptidyl-prolyl cis-trans isomerase [Agrobacterium sp. H13-3] Length = 287 Score = 89.7 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 29/302 (9%), Positives = 80/302 (26%), Gaps = 48/302 (15%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL---KLQKINGELEKIA 76 + + + ++A ++ + I ++ + L Q + + + A Sbjct: 7 IAAAVIVATLGLQFPAFAQEDKVVAKVGDLEIHQSELDLAMGNLDPQLAQLPDEQKKVAA 66 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + I L + G+ + + Sbjct: 67 LSGAIDVKLLVKNASAEGLEKTEDFKKR------------------------------ME 96 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 ++ + + + + N E++ +K+ E +L Sbjct: 97 FIQDRELHNAYFRKHVVDAVTNEEVKARYDKEVAALPKEEEIKAAHIL-----------V 145 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + KD + ++ ++ + G + + + P+F+ + Sbjct: 146 ASEDEAKDVIKQLDAGKDFAALAKEKSTDSNKDDGGDLGWFGKGRMVPEFEEAAFGLEKG 205 Query: 257 TT--NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P TQ G I + DKR + Q + ++K +++ I Sbjct: 206 AYTKTPVKTQFGFHVIKLEDKRIAPP--PAFEQVEPQVRQLVMRDKYVALIEKAKADQKI 263 Query: 315 HY 316 Sbjct: 264 EI 265 >gi|67459334|ref|YP_246958.1| protein export protein PrsA precursor [Rickettsia felis URRWXCal2] gi|75536240|sp|Q4UKY0|PLP_RICFE RecName: Full=Parvulin-like PPIase; AltName: Full=Peptidyl-prolyl cis-trans isomerase plp; AltName: Full=Rotamase plp; Flags: Precursor gi|67004867|gb|AAY61793.1| Protein export protein PrsA precursor [Rickettsia felis URRWXCal2] Length = 282 Score = 89.7 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 82/301 (27%), Gaps = 38/301 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + +IF V ++S ++A ++ T G + + I K + ++ Sbjct: 4 LSVIFLSVSMLSGIAFADKDKVVATYKGGEVKESQIMKEFKPQLNLQSGETIKN------ 57 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 ++ N L E+ + + Sbjct: 58 --------------FDDFPPQDQEKLIKIYVNNLLLKEEVAKSNITSSKEFQEKLENAKN 103 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +++ N + + NK + + +L QK Sbjct: 104 QLAQQELLANYIKSNITDKMFDDEYNKYVGNLKGKEQIKVAHIL-----------VKSQK 152 Query: 201 RIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL---LESDLHPQFQNLLKK-SQN 255 + + + E+ + K + G Y+ L P+F+ N Sbjct: 153 EANNIKTKLSKGGNFTKLAEESSLDKASASNGGVIGYILLNQPGQLVPEFEKKAFALKVN 212 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + +K+ + I K + +Y+ L + A + Sbjct: 213 EVSTPVKTDFGWHIIKVLEKKPVP--IPTKEEAKVTIDNILAAEVLKKYISDLEAKADLK 270 Query: 316 Y 316 Sbjct: 271 I 271 >gi|56419191|ref|YP_146509.1| post-translocation molecular chaperone [Geobacillus kaustophilus HTA426] gi|81675918|sp|Q5L289|PRSA_GEOKA RecName: Full=Foldase protein prsA; Flags: Precursor gi|56379033|dbj|BAD74941.1| post-translocation molecular chaperone [Geobacillus kaustophilus HTA426] Length = 281 Score = 89.7 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 85/304 (27%), Gaps = 41/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + + +S S S I T NG IT + + + K Sbjct: 1 MKKWMMAAAVVSLMALSACSNDGSEAIVETKNGN-ITKDEFYNEMK--------ERVGKS 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 +++LI E + ++ + + D + + + Sbjct: 52 VLRDLIDEKVLSKKYKVTDEEIDREIERI--------------KEAYGTQYDLAVQQNGE 97 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + + E E+ K +++ Sbjct: 98 KVIREMVKLDLLRTKAAVEDIKVTEKELKEYYDNYKPKIRASHIL--------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 +K K+ + + ++++ + G + + +F+ K Sbjct: 143 VKDEKTAKEVKAKLDKGEDFSKLAKEYSQDPGSASNGGDLGWFGPGKMVKEFEEAAYKLK 202 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-AEYVKKLRSNA 312 ++P T G I + DK +K ++ + K++ V KL +A Sbjct: 203 VGEVSDPVKTDYGYHIIKVTDKEKKKSFNEMKDEIAFEVKRNKLDPATMQSKVDKLVKDA 262 Query: 313 IIHY 316 + Sbjct: 263 GVEI 266 >gi|297569902|ref|YP_003691246.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfurivibrio alkaliphilus AHT2] gi|296925817|gb|ADH86627.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfurivibrio alkaliphilus AHT2] Length = 630 Score = 89.7 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 42/404 (10%), Positives = 101/404 (25%), Gaps = 95/404 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M S + L+ V+II + V T+N + I+ + +R Sbjct: 1 MLSLLRRKARS--PLIQAAVVIIILVFILWVPQMGGNGDPGTVATVNDQPISTREFQRRY 58 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 L Q + L + + +++ ETL Q K+G+ S + Sbjct: 59 NDLLGQYRDQFEGAIPSELIEALGLREQVLSQMVQETLLLQSARKTGLPVSSEELQQAVQ 118 Query: 108 QH---ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN-------------- 150 N S + + L + + F+ L + ++++ Sbjct: 119 SMGEFTENGQFSLQLYRQILAASRLSVHEFEAGLRTDLLRRKILEHLMGFAQVSDQEVRE 178 Query: 151 -------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 DF EI A + + +R P + Sbjct: 179 RFHRDHDQVRLSYLYLRADDFRAAQDPTSEEIEAYFAEKDHRYRTPPQVRIDYLLFPADD 238 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCN---------------------------------- 217 + + + E++R R Sbjct: 239 TEMTIEEEDLVAYYEQNRDRFDTPEQRRARHILIRSRSDAPEETRARQRQQAETVQELAR 298 Query: 218 -------KLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEY 269 ++ G + ++ P + + ++ T G Sbjct: 299 EGQDFRQLALLYSEDRSAEDGGDLGFFRRGEMLEPLEEAVFAMEPGEISDIVETSLGFHV 358 Query: 270 IAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 I + + ++ +A + + ++ + ++ + Sbjct: 359 IKLEEIQEPQTITLAEAEAEIRREILRSRGRQMAFNRANEVYES 402 Score = 39.3 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 6/68 (8%), Positives = 22/68 (32%), Gaps = 2/68 (2%) Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKH 300 + + ++ ++ TQ G I + ++ + + + + A + Sbjct: 439 PEAVSSAFELNRGELSSIISTQDGYAIIYVQEREEPQVPPLAEVLDRVRADLIEEQAAMA 498 Query: 301 EAEYVKKL 308 ++L Sbjct: 499 ARRAAEEL 506 Score = 36.6 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 27/296 (9%), Positives = 83/296 (28%), Gaps = 22/296 (7%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQ 88 + + + +S + T++ VI +I + + L + E+ + ++ ++ Sbjct: 337 AVFAMEPGEISDIVETSLGFHVIKLEEI-QEPQTITLAEAEAEIRREILRS----RGRQM 391 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 ++ ++S + A G+S + F +Q ++ Sbjct: 392 AFNRANEVYESILTTGSLARGAEEGGVSLQSTGLFTPEQPPAALRRHPEAVSS--AFELN 449 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + + Q+ + V + Q ++ ++ + Sbjct: 450 RGELSSIISTQDGYAIIYVQEREEPQVPPLAEVLDRVRADLIEEQAAMAARRAAEELLAA 509 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLE-----SDLHPQFQNL--LKKSQNNTTNPY 261 + + ++ + + +DL + +N Sbjct: 510 LQEGQDLQHLAAAE-----GYRVRESAWFSQATAAATDLPARVARTGLTLTKENPVPGTV 564 Query: 262 VT-QKGVEYIAICDKRDLGGEIALK--AYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + I + +R E+ + + K E +++ L A I Sbjct: 565 QSANDRFYVIKLQQRRTADEELFQRWAEPIENDLLMAKQEAMIDTWIQHLLQEAKI 620 >gi|153956391|ref|YP_001397156.1| foldase-related protein [Clostridium kluyveri DSM 555] gi|146349249|gb|EDK35785.1| Foldase-related protein [Clostridium kluyveri DSM 555] Length = 247 Score = 89.7 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 30/282 (10%), Positives = 78/282 (27%), Gaps = 39/282 (13%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 M + + +N IT+ D + ++ ++L+ E + + G Sbjct: 1 MQNNVLAIVNNVEITENDFKNVVKRFPAERQQYFNTDEGKKQLLDEIISFELFYNYGKEI 60 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + + V+ + + + + + + M Sbjct: 61 ELEKDRDYLVKL--------------------------ETTKKELLIQETI-SKIMENIK 93 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + E+ K++ + I + + Q + + + + Sbjct: 94 VTDKEVEDYYTNNKSMYKKPENITARHILVDSFEKAAQISNEIK---------KGLSFED 144 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276 +K++S G + P+F+ + + P TQ G I + K Sbjct: 145 AAKKYSSCPSKAQGGNLGNFTRGQMVPEFETAAFQLEIGILSKPVKTQFGYHLIKVEKKE 204 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G +K + K ++ + L+ I Sbjct: 205 KDSIKGFDKVKNAIKNGLLQEKRTLEYSKCINNLKDKYPIEI 246 >gi|282882421|ref|ZP_06291048.1| foldase protein PrsA [Peptoniphilus lacrimalis 315-B] gi|281297741|gb|EFA90210.1| foldase protein PrsA [Peptoniphilus lacrimalis 315-B] Length = 249 Score = 89.7 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 38/284 (13%), Positives = 84/284 (29%), Gaps = 47/284 (16%) Query: 40 SRIRTTINGEVITDGDISKRIAL----LKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 ++I +NG+ IT D + I L+ +N + K ++ELI L Q+ ++G Sbjct: 4 NKILAEVNGKKITGEDYNIFINSINPKLREHLVNSDQNKEVIEELIHHELIYQDAIENGK 63 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + A +S+ + + Sbjct: 64 DKEEEF-------------------------------QKVLDQAKKSLLLNYTLGKLLSN 92 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 E EI K ++ +R + D K+ ++ Sbjct: 93 IEVTEKEIEDFYNNHKEHFTKDQTVRASHILVDD---------LKKAEEIYNRIKDGADF 143 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274 + + ++ + G + + +F++ + P TQ G I + + Sbjct: 144 SKEAKNNSTCPSKENGGDLGIFSKGQMVKEFEDACFNMEVGEVSKPVKTQFGYHIIKLVE 203 Query: 275 KRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + ++ K ++ + + LR + I Y Sbjct: 204 KNKAQEMTLEESRDHIIEDIRRQKEQEIYKDKISSLREKSQIKY 247 >gi|294085490|ref|YP_003552250.1| PPIC-type PPIASE domain-containing protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292665065|gb|ADE40166.1| PPIC-type PPIASE domain protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 278 Score = 89.7 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 83/305 (27%), Gaps = 45/305 (14%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 ++++ F I+ I +++ +S T+NGE I + + L + N + Sbjct: 1 MQVILRSFCAILMLIFATMAHAESRIS---VATVNGETIWLDQVMQAAEGLPPEYRNKPM 57 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + V +T L+A+ + Sbjct: 58 QD---------------------------YFGDIVADIIDTKLAAKAGEAAKLADDPLVQ 90 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + + + + K + ++ + + + +L Sbjct: 91 DAMKLASERILAEAWLAVTVREKMTDEALQQAYDTFVADEASREQITASHIL-------- 142 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 + +S ++ ++ + G+ + P F+ Sbjct: 143 ---VAAEDDAVAIIKSLNDGADFAEIAKEKSTGPSGPNGGELGTFGRGQMVPAFETAAFA 199 Query: 253 SQ-NNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + P TQ G I + +K + Q + +H ++ LR+ Sbjct: 200 LPAGGFSAKPVQTQFGWHVIKVSEK--AVKPAPSFDAMRDQLVNSLSRQHLGRVIESLRA 257 Query: 311 NAIIH 315 + I Sbjct: 258 DQTIE 262 >gi|229132060|ref|ZP_04260923.1| Foldase protein prsA 2 [Bacillus cereus BDRD-ST196] gi|228651460|gb|EEL07432.1| Foldase protein prsA 2 [Bacillus cereus BDRD-ST196] Length = 285 Score = 89.7 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 81/304 (26%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 + F++ + ++S S T IT D K+ LK + L ++ Sbjct: 4 KSTFIITALISILMLSACGQKNDSATIATTTNSTITKSDFEKQ---LKDRYGKDTLYEMV 60 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 Q++I + K + V+ + G F ++ Sbjct: 61 AQDVITKKYK----------VSDDAVDKEVEKAKDQYG------EQFKATLENNRLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLALNEAIKQSVTEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SNENEAKEIKKKLDTGTSFEELAKQESQDLASKDNGGDLGYFGAGKMTPEFEKAAYKLKP 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNA 312 +NP + G I + DK+DL +K + ++ + ++ A Sbjct: 205 GQISNPVKSPNGYHIIKLTDKKDLQPYDKVKDSIRKDLEEERLADPSFGQKLLQDELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 DIKI 268 >gi|253996058|ref|YP_003048122.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylotenera mobilis JLW8] gi|253982737|gb|ACT47595.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylotenera mobilis JLW8] Length = 262 Score = 89.7 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 90/301 (29%), Gaps = 48/301 (15%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVI--TDGDISKRIALLKLQKINGELEKIAVQ 78 ++ V ++S A ++ T+NG+ + + D+ + QKI+ + + Sbjct: 3 LIQTLIAVAVLSMTPSAFAADALATVNGKPVKQSLYDVIVKDVTANGQKIDANTKAAIID 62 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 EL+ L QE ++ G+ ++ V + + Sbjct: 63 ELVSSELVYQEAQRLGLDKQADYVAREELGSRK--------------------------- 95 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + +++ + A ++ +EY R +L Sbjct: 96 ---LLTSMFLQDYVKKHPVSDADTKAAYEKYKTAYGDKEYSARHIL-----------VKT 141 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257 + KD + ++ + G + + + F +++ Q Sbjct: 142 EAEAKDIIAQLGKGGDFAKIAKEKSLDPGSKEKGGDLGWFSPATMVKPFSDVVANLQKGA 201 Query: 258 TN--PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T+ P TQ G I + D R L + + + + LR+ A I Sbjct: 202 TSASPVQTQFGWHVIKLVDTRPAQP--LPYEKLKDGIQKNLQQHNLEKLMSDLRAKAKID 259 Query: 316 Y 316 Sbjct: 260 I 260 >gi|188995416|ref|YP_001929668.1| putative peptidyl-prolyl cis-trans isomerase [Porphyromonas gingivalis ATCC 33277] gi|188595096|dbj|BAG34071.1| putative peptidyl-prolyl cis-trans isomerase [Porphyromonas gingivalis ATCC 33277] Length = 460 Score = 89.7 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 27/305 (8%), Positives = 85/305 (27%), Gaps = 17/305 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELE 73 + +++ + S + + + E I DI L G + Sbjct: 6 MRICIIMLSLLFWALPSMGQKNVIDEVVWMVGDEPILRSDIEATKRFLLSSGRPLEGNAD 65 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +++ V+ L + + I + VN + + + + Sbjct: 66 CYIPEQIAVQKLFLNQAKIDSIEVNEADVNRYVDMYLADYIQQFGSKEKMEEYFNRKYTQ 125 Query: 134 FKQYLAIQSIWP---DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF----S 186 ++ ++ +++ EI + ++ + Sbjct: 126 IREEQRVEVRNSEIVRMMRKKIDENVKVTPSEIRQYFASLPQDSLPYIPTTVEVQLLAIK 185 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQ 245 + + ++ + ++E ++ + G+ ++ ++ L + Sbjct: 186 PVISLHETDAIKKRLREFSDEINEGRRDFTTLARLYSEDSKTALQGGEYGFVSKASLDAE 245 Query: 246 FQNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 F ++ + + T G + + +KR G++ + P + E Sbjct: 246 FARVVFSLTDTKRVSPIIKTDDGYHIVQLIEKR---GDVINFRQIV--LKPKVSDAALTE 300 Query: 304 YVKKL 308 KL Sbjct: 301 TTNKL 305 >gi|238026987|ref|YP_002911218.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia glumae BGR1] gi|237876181|gb|ACR28514.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia glumae BGR1] Length = 259 Score = 89.7 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 83/278 (29%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I + +A L Q +L K QEL+ + QE K G+ + Sbjct: 25 VAVVNGTPIPKARVDAMVAQLVQQGQPDSEQLRKKVSQELVNREILMQEAIKEGVPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + DF+ K + Sbjct: 85 VKQQV-------------------------------AIAQQAVVLRAMIEDFVKKNQPSD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +I A ++ + ++ K+ K + + Sbjct: 114 ADIKARYDELTKSVSGNEYHLHHILVDN----------EQLAKELIAKIKAGAKFEDLAK 163 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F N + T+ P TQ G I + D R Sbjct: 164 QYSKDPGSAKNGGDLDWADPKSFVPEFANAATHLQKGQMTDTPVKTQFGWHIIRVDDVRP 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + AQ +++ + +KLR+ A I Sbjct: 224 VAP--PPLDQVKAQIAQQIVQQKLQAFEEKLRAQAKIQ 259 >gi|84500986|ref|ZP_00999221.1| PPIC-type PPIASE domain protein [Oceanicola batsensis HTCC2597] gi|84391053|gb|EAQ03471.1| PPIC-type PPIASE domain protein [Oceanicola batsensis HTCC2597] Length = 402 Score = 89.7 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 101/284 (35%), Gaps = 5/284 (1%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91 + + A S +N +V+T+ ++ +R +L+L + G+++ +A +LI + L+ Q E Sbjct: 17 AQFAAAQSFSPAIKVNDKVVTEFELDQRTRMLRLFRTPGDIDALAADQLIDDRLRMQAAE 76 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 + GI+ + + + A LSAE F + L + G+ F+ ++ W + ++ Sbjct: 77 EIGISPSEDQIMAGMEEFAGRANLSAEQFVAALQQAGVAPESFRDFVRAGVAWRETIRAR 136 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 F + E +I VL S L + R + Sbjct: 137 FGPRIQISEQQIDRALASGGASGASV----QVLMSEIFLPLTPGAEDETRALAQRIRGMS 192 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYI 270 + +S + G+ ++ S+L PQ ++++ + P + Sbjct: 193 AEAFARAAREHSSAPSAGAGGRVNWVPVSNLSPQLRSVILGLRPGQISEPVELDGQLALF 252 Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + A + + + R A + Sbjct: 253 LLRAVEETENRAPSYAAVEYAAYYIAGGRSAQALERAARVRAQV 296 Score = 42.7 bits (98), Expect = 0.069, Method: Composition-based stats. Identities = 9/86 (10%), Positives = 26/86 (30%), Gaps = 3/86 (3%) Query: 235 QYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKG--VEYIAICDKRDLGGEIALKAYLSAQ 291 ++ + + G + ++ +C + + ++ Sbjct: 317 GTRAPGEIPEDIAAELAQLDPGEVSTALTRSNGQTLVFLMLCGRSFDVSGAVSREGVALD 376 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHYY 317 ++ Y+++LRS A I Y Sbjct: 377 IQNQRLASFAQGYLQQLRSEARIVRY 402 >gi|294339748|emb|CAZ88110.1| putative Peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D) PpiD [Thiomonas sp. 3As] Length = 640 Score = 89.7 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 47/405 (11%), Positives = 98/405 (24%), Gaps = 103/405 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58 M + S ++++ + F + I Y S+ S+ + G+ I+ + Sbjct: 1 MLESIRKH-SKLMQIVLFVLIFPSFVLFGIQGYSSFEGSADAAAKVGGQTISMQQLDAAN 59 Query: 59 --RIALLK---------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 IA L+ Q E + + +I +TL + E + + V + Sbjct: 60 RDEIARLQSMLGSAVDIKQLDTPEQKLRTLDGMIRQTLLQLEARREHLEVTDAQVQQAIL 119 Query: 108 QHAR-------NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------- 149 Q + + + + S + QG+ F+ + Q I V+ Sbjct: 120 QIPQIAALRKPDGSFDVQAYRSLIAAQGMNTAQFEAQVREQLILQQVLSGLAGSVIDSQA 179 Query: 150 ----------------------NDFMLKYGNLEMEIPANKQKMKNITVR----------- 176 D+ + E+ + + Sbjct: 180 LATAAAKAAAQQRVVRLALFKPADYTAQVQVTPQEVETFYKNNTARFQKPESADIQYVVL 239 Query: 177 ------------------EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 Y FS P + + + + + Sbjct: 240 SAAEVAAGIKVTAEQAKAFYDANLSKFSTPAERRASHILIAVPTDATAAQQEQAKARAEA 299 Query: 219 LEKFASKI----------------HDVSIGKAQYLLESDLHPQFQN--LLKKSQNNTTNP 260 + K G Y + F + + P Sbjct: 300 IAKQVKANPAEFPALARKDSQDPGSAEKGGDLGYFTADAMVKPFADAVFGMQKIGEIAGP 359 Query: 261 YVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAE 303 TQ G I + + A+KA + Q +K + Sbjct: 360 IKTQFGYHIIELTGIKPGAQQPFDAVKASIEKQLQQEAAQKQMSA 404 >gi|317485995|ref|ZP_07944850.1| ppic-type ppiase domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316922768|gb|EFV43999.1| ppic-type ppiase domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 629 Score = 89.7 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 41/403 (10%), Positives = 97/403 (24%), Gaps = 98/403 (24%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + ++++F + S + T+NGE IT + ++ Sbjct: 1 MLDLIRANAQSWGVKIAFGIIILVFVFWGVGGLTGG--PSTVILTVNGEPITIQEFQRKY 58 Query: 61 ALLKLQKING------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 L+ Q +L++ +Q LI+E L QE ++ GI + Sbjct: 59 EQLEQQVRAQYPDLDAAGLKAMQLKQQLIQNLILENLIMQEAKRVGIVVTPVELRKLIES 118 Query: 109 HARNTG----LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK--------------- 149 + + + Q +F+ L + + Sbjct: 119 FPAFHNAEGKFDPDAYVRVIKAQRNTPGNFEAELRNNMLMNKLRADVTAGAFVPEAEVRD 178 Query: 150 ------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV-------- 183 D+ K + +I + + Sbjct: 179 LFRYEGERRILEYVFYPLEDYTSKVTVDDAQIKDYYEANQASFTVPPQADVEYLLIGAEA 238 Query: 184 ----LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--------- 230 + + E R R + + A Sbjct: 239 LAAAQNISDAAVSEYYEKNAAQFATPEMVRARHILILSDAKASAEDQAKAKAKIEEIAKR 298 Query: 231 ---IGKAQYLLE--------------------SDLHPQF-QNLLKKSQNNTTNPYVTQKG 266 + + + P+F + + + P TQ G Sbjct: 299 IKAGEDFGEVAKEVSEDPGSGPQGGELGWFAHGQMVPEFDKASFALNPGELSEPVKTQFG 358 Query: 267 VEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 I + +K+ +K + + + E +++ Sbjct: 359 WHLIQLEEKKAAGQKPLDEVKDQIRTRLAQDEASGKVQEALEQ 401 >gi|121602142|ref|YP_988681.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Bartonella bacilliformis KC583] gi|120614319|gb|ABM44920.1| PPIC-type PPIASE domain protein [Bartonella bacilliformis KC583] Length = 315 Score = 89.7 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 32/290 (11%), Positives = 76/290 (26%), Gaps = 48/290 (16%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISK---RIALLKLQKINGELEKIAVQELIVETLKKQ 88 + + S + TI+G+ IT G + + I ++ + + ++ + + + Sbjct: 41 ASEKPVDPSHVMATIDGKNITAGQLDELALEINPNLVRIPDEQRRITVLRAYLDMQVLAK 100 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 + I + + Sbjct: 101 AAIQENIHKTEAYDKR------------------------------MAVMRDNILQQLYF 130 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 K + K + +++I +K+ E R +L +K + + Sbjct: 131 KQMVVDKITDGDLKILYDKEVAALPKEDEVKARHIL-----------VKTKKEAQAIIKR 179 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKG 266 + +K ++ G Y + F++ T P + G Sbjct: 180 LKKGENFEEIAKKDSTDGSAAVGGDLGYFSYGQMVKPFEDAAFSLKVGEYTKNPVESPFG 239 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D+R I+ + + LRS + Y Sbjct: 240 WHIIKVEDRRLKQP--PEFDDAKEVLRAQIIKDRYQQLIADLRSKIDVKY 287 >gi|320162050|ref|YP_004175275.1| hypothetical protein ANT_26490 [Anaerolinea thermophila UNI-1] gi|319995904|dbj|BAJ64675.1| hypothetical protein ANT_26490 [Anaerolinea thermophila UNI-1] Length = 303 Score = 89.3 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 30/282 (10%), Positives = 69/282 (24%), Gaps = 48/282 (17%) Query: 43 RTTINGEVITDGDISKRIALLK-------LQKINGELEKIAVQELIVETLKKQEIEKSGI 95 +NGE + + + L+ L E ++ + +LI TL Q K G Sbjct: 57 VLVVNGEGVPLAEYEASLKQLQEAQAQMGLTSTPEEQRRMVLDDLIAATLLAQAAFKEGF 116 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 T D + A G + + + + +++ + Sbjct: 117 TLDDAALEEQIAALAEQRGGMSALQNWMTRMGYDEVSFRSALRRS--LAAAWMRDTIAAQ 174 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 ++ R +L P+ Q ++ Sbjct: 175 VPERAEQV---------------HARQILLMTPETAQQVLNQIRA--------------- 204 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273 A + G + L + + T+ G + + Sbjct: 205 GANFATLAFGYDLTTGGDLGWFPRGYLTQPAVEEAAFALQPGEVSEIIQTELGYHILQVL 264 Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++ + K ++++ R+ A I Sbjct: 265 ERETDRLLSPDARLTLQR-------KALEAWLQQARTQAQIE 299 >gi|114563758|ref|YP_751271.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella frigidimarina NCIMB 400] gi|114335051|gb|ABI72433.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella frigidimarina NCIMB 400] Length = 625 Score = 89.3 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 39/407 (9%), Positives = 96/407 (23%), Gaps = 95/407 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + V++ F + SY +NG+ I ++ + Sbjct: 1 MLEKIREGSQGIVAKTILVLVILSFAFAGVSSYLGSNTGVP-AAVVNGDEIGANELEQAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +++ + LI + L Q K G+ + Sbjct: 60 QNERSRIEQQLGEMFTALAADDSYMNGIKQGVLDRLIADKLIDQAANKLGLRVSDEQIKK 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNH---FKQYLAIQSIWPDVVKND---------- 151 ++ D +L F+ + + ++ Sbjct: 120 AIIEEPAFQTDGQFDNERYLAVLRQLGYQTTSFRNMMRVDMTRRQLLNALVGSEFVLDGE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRT------ 182 F+ + E + + + + Sbjct: 180 AKQLAEVQGQTRDIRYLVVDSTPFLSTVSVADEEAQSYYDANISQYMSPEKVSLEYVELN 239 Query: 183 -------------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA------ 223 + + + +KR+ +K + A Sbjct: 240 VADMAKSSETSDEEVKTYYEENKAQYQTAEKRLAAHIFVAATDDDSADKAKADAIEAKLT 299 Query: 224 --------------SKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVE 268 ++ GK + + + P F + L ++ ++ ++ G Sbjct: 300 AGEDFADVAKADSDDQLSAQQGGKLDWFEQGVMDPAFDEALFGLQKDQVSSIVKSEFGYH 359 Query: 269 YIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 I + D + +KA + AQ K KL + Sbjct: 360 IIKLLDLQASQATAFENVKAKIVAQLQEKKALDVFYSLQTKLADTSY 406 >gi|28209963|ref|NP_780907.1| peptidylprolyl isomerase [Clostridium tetani E88] gi|46396876|sp|Q899I2|PRSA_CLOTE RecName: Full=Foldase protein prsA; Flags: Precursor gi|28202398|gb|AAO34844.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium tetani E88] Length = 339 Score = 89.3 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 36/330 (10%), Positives = 93/330 (28%), Gaps = 16/330 (4%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---- 57 + + F LL + ++ A+ + + IT G++ Sbjct: 1 MKHLKNNTKKFTALLFALLFSMSIAGCNMIEKTPEAIEKSPVAKVGKKTITRGELDTYPI 60 Query: 58 --KRIALLKLQKINGELEK-IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 +++ LK Q + +LI + E + Sbjct: 61 LAEQLTKLKEQFGGDLSKNAEIKDQLIQFKSQVLEQMIQEEIVFEKSEELKVDNAKVEKE 120 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 + + + +K+ L + +K F + E+ K + Sbjct: 121 VEKNLKNFMDQGFQGNKDKYKEDLKKMGTTEESIKRFFKAQVITEEVSKQVVKDVKVDDN 180 Query: 175 VREYLIRTVLFSIPDNKLQNQGF-----VQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + ++ NK ++ K + + ++ + Sbjct: 181 TAKKHYEESKYTFTVNKPTFHAQHVLVKTEEEAKKVKARLDKGEDIKKIAKELSIDPSAK 240 Query: 230 -SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALK 285 + G S + F + + K ++ + P +Q G I + DK ++ ++K Sbjct: 241 ENSGDLGKAPYSSMVKPFADAIVKLNKGEISQPVKSQFGYHVIKLIDKDEVTFKDFNSVK 300 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + T+ K E +++ + + Sbjct: 301 EQIKKDLLETEKRKVFNEKIEQWKKELKVE 330 >gi|253681295|ref|ZP_04862093.1| foldase protein PrsA [Clostridium botulinum D str. 1873] gi|253562533|gb|EES91984.1| foldase protein PrsA [Clostridium botulinum D str. 1873] Length = 348 Score = 89.3 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 34/344 (9%), Positives = 91/344 (26%), Gaps = 33/344 (9%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK------- 58 ++ + + ++ A+ + + IT G++ Sbjct: 1 MKNIRKLVATAVLCIFTMSAVGCSMIEKTPEAIKKTVVAKVGDRKITKGELDSHFGVKRY 60 Query: 59 ----------------RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +I Q ++IA QE + + ++ ++ + Sbjct: 61 LDQFKQQYGENFEQNPQIKEQVKQIKIAVAKQIASQEALKQEAERLKLVPNDQELKKEID 120 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + L G+ + F+ + I + +N+ + E Sbjct: 121 KKTEEFKKEQHIKDNKGLDEALKMSGLQKSDFENIIKDNIIIEKL-QNELTKNIKVDDKE 179 Query: 163 IPANKQKMKNITVREYLI----RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 I K K+ ++ + ++ + IK +E + Sbjct: 180 IEKYYNKNKDNYPKDPKNPTKIHVAHIILKVKTPEDDAKAKDEIKSIKEELNKGADFAVL 239 Query: 219 LEKFASKIHDVSIGKAQY---LLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 +K++ + G + L ++P TQ G I + + Sbjct: 240 AKKYSQDGSKDNGGDLGTVPAINSKFDQDFMNAALTLKDGEISDPVKTQFGYHIIKMIKR 299 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + +K + K + K+++ A + + Sbjct: 300 EEAPCKTFAEVKNQVKEDILQNKKSEVINNKFKEIQDKASLKIF 343 >gi|221198202|ref|ZP_03571248.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia multivorans CGD2M] gi|221208305|ref|ZP_03581308.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia multivorans CGD2] gi|221171718|gb|EEE04162.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia multivorans CGD2] gi|221182134|gb|EEE14535.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia multivorans CGD2M] Length = 260 Score = 89.3 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 84/278 (30%), Gaps = 47/278 (16%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I +A L + Q + +L++ QEL+ + QE + GI + Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIREGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + +F+ K + Sbjct: 85 VKAQV-------------------------------AVAQQTVVLRAMIENFLKKNQPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A ++ + + + + K + + Sbjct: 114 AEVKARYDELVKTAGGNREYHLHHILVDSEQQAKDLIAKIK---------GGAKFEDLAK 164 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRD 277 +++ + G + P+F +K + T P TQ G I + D RD Sbjct: 165 QYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDEPVKTQFGWHIIRVDDIRD 224 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + A + AQ +++ + + LR A I Sbjct: 225 VAP--PPFAQVKAQIAQQLVQQKLQTFEETLRQQAKIQ 260 >gi|15892803|ref|NP_360517.1| protein export protein prsA precursor [Rickettsia conorii str. Malish 7] gi|20138841|sp|Q92H91|PLP_RICCN RecName: Full=Parvulin-like PPIase; AltName: Full=Peptidyl-prolyl cis-trans isomerase plp; AltName: Full=Rotamase plp; Flags: Precursor gi|15619985|gb|AAL03418.1| protein export protein prsA precursor [Rickettsia conorii str. Malish 7] Length = 282 Score = 89.3 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 82/301 (27%), Gaps = 38/301 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + +IF V ++S ++A ++ T G + + I K + ++ Sbjct: 4 LSVIFLSVSMLSGIAFADKDKVVATYKGGEVKESQIMKEFKPQLNLQSGETIKN------ 57 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 ++ N L E+ + + Sbjct: 58 --------------FDDFPPQDQEKLIKIYVNNLLLKEEVAKSNITSSKEFQEKLENAKN 103 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +++ N + + NK + + +L QK Sbjct: 104 QLAQQELLANYIKSNITDKMFDDEYNKYVGNLKGKEQIKVAHIL-----------VKSQK 152 Query: 201 RIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL---LESDLHPQFQNLLKK-SQN 255 D + + E+ + K + G Y+ L P+F+ N Sbjct: 153 EANDIKTKLSKGGNFTKLAEELSLDKASASNGGVIGYILLNQPGQLVPEFEKKAFALKVN 212 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + +K+ + I K + +Y+ L + A + Sbjct: 213 EVSTPVKTDFGWHIIKVLEKKPVP--IPTKEEAKVTIDNILAAEVLKKYIADLEAKANLK 270 Query: 316 Y 316 Sbjct: 271 I 271 >gi|221215070|ref|ZP_03588037.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia multivorans CGD1] gi|221165006|gb|EED97485.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia multivorans CGD1] Length = 260 Score = 89.3 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 85/278 (30%), Gaps = 47/278 (16%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I +A L + Q + +L++ QEL+ + QE + GI + Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIREGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + +F+ K + Sbjct: 85 VKAQV-------------------------------AVAQQTVVLRAMIENFLKKNQPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A ++ +++ K+ K + + Sbjct: 114 AEVKARYDELVKTAGGNREYHLHHIL---------VDSEQQAKELIAKIKGGAKFEDLAK 164 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRD 277 +++ + G + P+F +K + T P TQ G I + D RD Sbjct: 165 QYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDEPVKTQFGWHIIRVDDIRD 224 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + A + AQ +++ + + LR A I Sbjct: 225 VAP--PPFAQVKAQIAQQLVQQKLQTFEETLRQQAKIQ 260 >gi|115525459|ref|YP_782370.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisA53] gi|115519406|gb|ABJ07390.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisA53] Length = 353 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 33/289 (11%), Positives = 81/289 (28%), Gaps = 32/289 (11%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA-VQELIVETLKK 87 + + + + +T D+ +IA L Q+ + A + +L+ L Sbjct: 72 SSATKSMGKNAGDVVARVGDTDVTADDLRAQIAALGPQEQAALAKDPAQLSQLVRMLLAN 131 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 Q + I + + + ++ Sbjct: 132 QLVLDEVIEKKWDQRPNVV--------------------------KQLERVRESAVVELY 165 Query: 148 VKNDFMLKYGNL-EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 +++ E EI + V + I K ++ K K E Sbjct: 166 LQSVSTPPDSYPGEDEIQKVYDANRGQLVVPRQYQLSQIFIASPKDADKATEDKARKKLE 225 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIG-KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 + + +L A + D + E+ L P+ ++ + ++ ++P Sbjct: 226 DIQKKLKAPGADFAAIAGEESDAKGSADLGSIPENQLIPEIRSHVVGLAKGAVSDPIRLD 285 Query: 265 KGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 G + + D + ++ L+ Q + Y+ +L Sbjct: 286 AGWHIVKLTDTKASYTRTLPEVRDQLAQQMRKERAAALRRGYLAELLKQ 334 >gi|238650638|ref|YP_002916490.1| protein export protein prsA precursor [Rickettsia peacockii str. Rustic] gi|238624736|gb|ACR47442.1| protein export protein prsA precursor [Rickettsia peacockii str. Rustic] Length = 282 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 81/301 (26%), Gaps = 38/301 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + +IF V ++S ++A ++ T G + + I K + ++ Sbjct: 4 LSVIFLSVSMLSGIAFADKDKVVATYKGGEVKESQIMKEFKPQLNLQSGETIKN------ 57 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 ++ N L E+ + + Sbjct: 58 --------------FDDFPPQDQEKLIKIYVNNLLLKEEVAKSNITSSKEFQEKLENAKN 103 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +++ N + + NK + + +L QK Sbjct: 104 QLAQQELLANYIKSNITDNMFDDEYNKYVGNLKGKEQIKVAHIL-----------VKSQK 152 Query: 201 RIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL---LESDLHPQFQNLLKK-SQN 255 + + E+ + K + G Y+ L P+F+ N Sbjct: 153 EANYIKTKLSKGGNFTKLAEELSLDKASASNGGVIGYILLNQPGQLVPEFEKKAFALKVN 212 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + +K+ + I K + +Y+ L + A + Sbjct: 213 EVSTPVKTDFGWHIIKVLEKKPVP--IPTKEEAKVTIDNILAAEVLKKYIADLEAKANLK 270 Query: 316 Y 316 Sbjct: 271 I 271 >gi|254975855|ref|ZP_05272327.1| putative protein export chaperone [Clostridium difficile QCD-66c26] gi|255093242|ref|ZP_05322720.1| putative protein export chaperone [Clostridium difficile CIP 107932] gi|255307280|ref|ZP_05351451.1| putative protein export chaperone [Clostridium difficile ATCC 43255] gi|255314984|ref|ZP_05356567.1| putative protein export chaperone [Clostridium difficile QCD-76w55] gi|255517659|ref|ZP_05385335.1| putative protein export chaperone [Clostridium difficile QCD-97b34] gi|255650769|ref|ZP_05397671.1| putative protein export chaperone [Clostridium difficile QCD-37x79] gi|260683854|ref|YP_003215139.1| putative protein export chaperone [Clostridium difficile CD196] gi|260687514|ref|YP_003218648.1| putative protein export chaperone [Clostridium difficile R20291] gi|306520675|ref|ZP_07407022.1| putative protein export chaperone [Clostridium difficile QCD-32g58] gi|260210017|emb|CBA64063.1| putative protein export chaperone [Clostridium difficile CD196] gi|260213531|emb|CBE05267.1| putative protein export chaperone [Clostridium difficile R20291] Length = 380 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 28/298 (9%), Positives = 84/298 (28%), Gaps = 16/298 (5%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE----LIVETL 85 + + SS + TI + IT + KR+ L + ++ +I + Sbjct: 78 LPATSKHYNSSEVVATIGDKKITGEMLRKRMEPLFYLNAKTTMTDDEIRSYESNMIETMI 137 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + + N N S E ++ + + + Sbjct: 138 TSDILSSEAAKEKISITNDQLDAQYNNLMSSIESAMGMTKEEFLKQFDLTEKYIKDDMKK 197 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK-----LQNQGFVQK 200 ++V + ++ + + + N + +L D+K + ++K Sbjct: 198 ELVASKYLNEKSKVTDKEAENYYNKNKSNYLQVRASHILIKTVDDKGKQVSSSKKAELKK 257 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT- 258 ++ + +K++ S G + + + F+ + + Sbjct: 258 EAEEILKKAQAGEDFATLAKKYSEDSSAESGGDLGFFGKGQMVESFEKAAFALKKGEVSN 317 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G I D++ + + + + + ++ L+ + Sbjct: 318 KLVESDYGYHIIKKTDEKYQP-----FEEVKSDLVSSLTSEKQNLLIQNLKEKYNVKI 370 >gi|323706239|ref|ZP_08117806.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacterium xylanolyticum LX-11] gi|323534403|gb|EGB24187.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacterium xylanolyticum LX-11] Length = 301 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 28/287 (9%), Positives = 78/287 (27%), Gaps = 18/287 (6%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQEIEK 92 S ++ I ++G+ IT + +K Q + I Q + Sbjct: 21 SCGVNKNIVAKVDGQDITLKEYQDSFNQVKAQIESDPQYTKDIWNQNYNEQKFIDVVENS 80 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 + + + T E + ++ K+ + +V + Sbjct: 81 VLDNLILEKLLLKEAEKEKFTAKDKEITDEYSAEKATNSKVTKEMAKDNVLINKLVDSW- 139 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 + E K+ ++ +K + + ++ Sbjct: 140 TKNVKVTDSEALKYYNDNKSQFEVVKASHILVSD------------EKTANEIYDKLMKG 187 Query: 213 PKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + ++++ + G+ + +F++ + P TQ G I Sbjct: 188 ANFADLAKQYSIDTSTKDNGGELGEFTRGTMVKEFEDAAFALKPGEISKPVKTQYGYHII 247 Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + K+ + + K + + + L+ A I + Sbjct: 248 K-SEAKYTKSFDEAKSSIISYLENNKKQDIFNQKSEALKKAAKIEKF 293 >gi|237752063|ref|ZP_04582543.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gi|229376630|gb|EEO26721.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 271 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 96/300 (32%), Gaps = 42/300 (14%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQKINGELEKIAVQE 79 I+ V + A ++ +NG ITD DI+ + + ++ E + + + Sbjct: 4 ILASSVIAFALLQGASFAKTYAEVNGADITDRDIATLMRAMPGVAFDQLPSEAKTQVINQ 63 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 I L ++ +K + Sbjct: 64 AIERKLLIEQAKKEKVQNSKEYKEAVASV------------------------------- 92 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + ++ M K L+ EI + K+ V+ I+ + + Sbjct: 93 EEDLMLEIWMRKQMDKVKVLDSEITKFYNENKSKFVQPETIKASHILVTSESEAKAIIAE 152 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--T 257 + + + K + + + + G+ Y+ ++ + P+F N K Q T Sbjct: 153 LK----KAGKNVAGKFDSLAREKSKDGSAQNGGELGYIAKNQVVPEFANAAFKLQKGAYT 208 Query: 258 TNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T P +Q G I + DK+ G +K + K ++ + ++LR A I Sbjct: 209 TTPVKSQFGYHVILVEDKKPAGTIALKDIKGQIEQNLKLKKFQEEIKKEGEELRKKAKIE 268 >gi|319943549|ref|ZP_08017831.1| peptidyl-prolyl cis-trans isomerase [Lautropia mirabilis ATCC 51599] gi|319743364|gb|EFV95769.1| peptidyl-prolyl cis-trans isomerase [Lautropia mirabilis ATCC 51599] Length = 271 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 77/277 (27%), Gaps = 44/277 (15%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG+ I + + + +L Q E K+ ELI L QE +K G+ Sbjct: 35 AAVVNGKAIPSSRVDEFVKILAQQGRPDTPETRKMIRDELITRELFVQEADKRGLEKTPE 94 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + + + ++ N+ Sbjct: 95 VKQQL------------------------------EQIRQDVLIRALIANELKQSPVTDA 124 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 ++ +K+ + +++ + + V++ + + + Sbjct: 125 EVKAEYEKLVKDSAQSGAQEYKARHILVESEDEAKQIVER--------LKKGEGFESLAK 176 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDL 278 + G + +F + + K + T P TQ G I + D R Sbjct: 177 LSKDPGSGANGGDLGWNTPDTFVKEFSEAMTKLKKGEYTVIPVKTQFGYHIIQLDDVRAA 236 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + Q + +KLR++A I Sbjct: 237 EP--PPFDQVKPQLKQQLERQKIQALQEKLRASAKIQ 271 >gi|170764243|ref|ZP_02639032.2| foldase protein PrsA [Clostridium perfringens CPE str. F4969] gi|170714999|gb|EDT27181.1| foldase protein PrsA [Clostridium perfringens CPE str. F4969] Length = 325 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 38/314 (12%), Positives = 88/314 (28%), Gaps = 21/314 (6%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING------------ 70 +V A+ T+NGE IT G++ + + Q + Sbjct: 2 FSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFAQMKSQYGDKYMDDPQVA 61 Query: 71 ----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 + + VQ L+ + + E +K GI + + N D + Sbjct: 62 QQILQQRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQFENIKKGMGDNFDKALE 121 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + + + + +I + K V + Sbjct: 122 AEGYTEDTFKEFLKNQVIAEATVEYATKDVKVSDEDIKKYYDENKQQFVVKAGADVKHLL 181 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 P + + + + + + L K + + ++G+ Y + Sbjct: 182 FPTEEEAQKAYDEIQSGKT--TFDDLFNKYEKNKDPKKEPIAENLGRVDYNNSNFDKDFM 239 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIA---ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 + L + P + G I I DK E K + + K ++ + Sbjct: 240 EGLKGLKDGEISKPVKSSFGYHIIKATNITDKETQLTEEQAKEQIISILENQKKKEAYQK 299 Query: 304 YVKKLRSNAIIHYY 317 +++ + + + Y Sbjct: 300 DLEQWKKDLNVKVY 313 >gi|198282817|ref|YP_002219138.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665858|ref|YP_002425014.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247338|gb|ACH82931.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518071|gb|ACK78657.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Acidithiobacillus ferrooxidans ATCC 23270] Length = 258 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 39/295 (13%), Positives = 86/295 (29%), Gaps = 45/295 (15%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 + VS + + T+NG I + ++ +++ + VQ L+ Sbjct: 5 AVILAATVSAFAIPAFAAPVATVNGAAIDNSEVQAIMSMSPALAKEPNAREQVVQNLVNM 64 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + Q + Q Q + Sbjct: 65 EVLSQYAVNHKL------------------------------GQTADVKERLAMAKRQIL 94 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 V+ A + ++ + +E+ +R +L + G ++ Sbjct: 95 ADAAVEQYVKEHPIPETDIQNAYNKFVQAMGKKEFEVRHILVKTKTEADKIMGDLKA--- 151 Query: 204 DAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPY 261 K EK++ K G+ +++ + P F ++ + + P Sbjct: 152 --------GQKFSALAEKYSIDKASAAHGGELGWIVPGMVVPPFAQAIETAPIDKPVGPV 203 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 TQ G I + R L + + + ++ A++V LRS A I+ Sbjct: 204 QTQFGYHVIEVQATRALTP--PPLSAMKDRIKTQLQQQEAAKFVSNLRSQAKINI 256 >gi|226324373|ref|ZP_03799891.1| hypothetical protein COPCOM_02154 [Coprococcus comes ATCC 27758] gi|225206821|gb|EEG89175.1| hypothetical protein COPCOM_02154 [Coprococcus comes ATCC 27758] Length = 245 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 31/281 (11%), Positives = 73/281 (25%), Gaps = 46/281 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKIN----GELEKIAVQELIVETLKKQEIEKS 93 M + I G IT ++ IA L ++ + K V +LI + E+ Sbjct: 1 MEKTVEAVICGHEITSAEVDAFIASLPREQQVYASHPDFRKQCVDQLIAVYALAKYGEEE 60 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + + + + Sbjct: 61 KLDETEKFK------------------------------AILENARKDILAQMAI-GKIF 89 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + EI + K + + + N+ E Sbjct: 90 EGIIISDEEIREYFEANKARFAKGASVHAKHILVDSEDKCNK--------LLESIVSGGK 141 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 + ++ ++ + G + + +F++ + P TQ G I + Sbjct: 142 AFEDVAKESSTCPSGANGGDLGEFGKGQMVKEFEDAAFAAEIGHVVGPVKTQFGYHLIKV 201 Query: 273 CDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 DK++ +K + ++ K ++ V+ L+ Sbjct: 202 EDKKEAEDAKLDDVKEQIKSEIMQKKQQEAYTAKVEALKKK 242 >gi|238791435|ref|ZP_04635073.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia intermedia ATCC 29909] gi|238729051|gb|EEQ20567.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia intermedia ATCC 29909] Length = 628 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 37/399 (9%), Positives = 107/399 (26%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + +++ F + + SY + +NG+ I+ + + + Sbjct: 1 MMDNLRAAANNVVLKIILALIMLSFILTGVGSYLIGGSNDF-AAKVNGQEISRAQLEQAV 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +L + + +L+ L Q +K G+T V Sbjct: 60 QSERGRLQQQLGEQFSALAANEGYMLQLRQQVLGQLVNNMLLDQYAKKLGLTASDEQVKD 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY--------------------------L 138 Q + D + +L+ Q+ Sbjct: 120 AIRQAPYFQTDNKFDNNKYLELVNRMGYTPDQFAQLQRQQLINQQLLQAFGDTGFVLPVE 179 Query: 139 AIQSIWPDVVKNDF----------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 A + + + + + E+ A + KN + ++ + Sbjct: 180 AQAMSELILQQREVRLATIDLKALQAQQKVTDEELKAYYDQNKNSFIAPEQMKVSFIVMD 239 Query: 189 DNKLQNQG-------------------------------FVQKRIKDAEESRLRLPKDCN 217 +Q++ + K A + + Sbjct: 240 AAAMQDKITLTEEDIAAYYELHKSSYTQPEQRNYSVIQFKTEAEAKTALDELKKGADFAA 299 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ I + G+ +L + + + ++ + G + + D + Sbjct: 300 MAKEKSTDIISRKNGGELGWLEPDTTADELKQANLNEKGQLSDVVKSSVGYLIVRLNDIK 359 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + L+ Q K +K+ A Sbjct: 360 PAQVKPLSEVHDALAKQVKQGKAVDAYYALQQKVSEAAT 398 >gi|327438758|dbj|BAK15123.1| parvulin-like peptidyl-prolyl isomerase [Solibacillus silvestris StLB046] Length = 282 Score = 89.3 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 30/306 (9%), Positives = 89/306 (29%), Gaps = 45/306 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + T F L + + + + + + T++ IT + + + + L++ Sbjct: 1 MKKTIFALTVAASIGLAACSNPGDEVVVSTSVGD--ITQEEFYNSMKDI---AGDQLLQQ 55 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + V++++ + K + G S E + + Sbjct: 56 VVVEQILNDKYK----------VTDEEIEEELKGVKEQYGESYEAVLAQSNLTEETLKTN 105 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 ++ +++ + + EI + +++ Sbjct: 106 IRFT--------LLQEKALKDVEVTDEEIEKYYNQASQELNARHIL-------------- 143 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 ++ K+ + ++F++ G + + P+F + Sbjct: 144 -VEDEETAKEIKAKLDAGEDFAKLAKEFSTDPGSGAQGGDLGWFTVGTMVPEFNDAAYAL 202 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGE---IALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + P ++ G I + +KRD+ K + TK + + +L Sbjct: 203 EIDEISEPVQSEHGFHIIQVTEKRDVKDYGKLEDKKEEIRESIAATKAD--WNTKMAELI 260 Query: 310 SNAIIH 315 A + Sbjct: 261 KEADVK 266 >gi|34581487|ref|ZP_00142967.1| protein export protein prsA precursor [Rickettsia sibirica 246] gi|28262872|gb|EAA26376.1| protein export protein prsA precursor [Rickettsia sibirica 246] Length = 282 Score = 89.0 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 82/301 (27%), Gaps = 38/301 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + +IF V ++S ++A ++ T G + + I K + ++ Sbjct: 4 LSVIFLSVSMLSGIAFADKDKVVATYKGGEVKESQIMKEFKPQLNLQSGETIKN------ 57 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 ++ N L E+ + + Sbjct: 58 --------------FDDFPPQDQEKLIKIYVNNLLLKEEVAKSNITSSKEFQEKLENAKN 103 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +++ N + + NK + + +L QK Sbjct: 104 QLAQQELLANYIKSNITDKMFDDEYNKYVGNLKGKEQIKVAHIL-----------VKSQK 152 Query: 201 RIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL---LESDLHPQFQNLLKK-SQN 255 D + + E+ + K + G Y+ L P+F+ N Sbjct: 153 EANDIKTKLSKGGNFTKLAEELSLDKASASNGGVIGYILLNQPGQLVPEFEKKAFALKVN 212 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + +K+ + I K + +Y+ L + A + Sbjct: 213 EVSTPVKTDFGWHVIKVLEKKPVP--IPTKEEAKVTIDNILAAELLKKYIADLEAKANLK 270 Query: 316 Y 316 Sbjct: 271 I 271 >gi|148269160|ref|YP_001243620.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotoga petrophila RKU-1] gi|170287822|ref|YP_001738060.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotoga sp. RQ2] gi|281411458|ref|YP_003345537.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotoga naphthophila RKU-10] gi|147734704|gb|ABQ46044.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotoga petrophila RKU-1] gi|170175325|gb|ACB08377.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotoga sp. RQ2] gi|281372561|gb|ADA66123.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotoga naphthophila RKU-10] Length = 329 Score = 89.0 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 31/338 (9%), Positives = 90/338 (26%), Gaps = 52/338 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL-- 72 + FV+++ + + ++ SS + +NG IT + + + + ++ Sbjct: 1 MRKLIFVILVVLGISLFG-QATTTSSTVVAIVNGNPITSDLLELEADIDGILRSIAQIDL 59 Query: 73 -------------------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN- 112 ++ + LI + L +Q EK G+ V + Sbjct: 60 RFFNVLTGTEEGLKLLLKYKQEVLNSLIDDLLVQQLAEKEGVGVSDEEVKKEVEARLKET 119 Query: 113 -------TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + + + ++ E Sbjct: 120 VETMGITLEDLDKFLQRAGYGDLESFKKRLHWHMKTQLSLQRLQEKITQNATVTLEEAQN 179 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + K + + + ++ +A + + A Sbjct: 180 YYNQNKETYRIPAAVHLYRITT---------EDKSKMDEALSKIRKGEDFLEVATQVA-- 228 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL--GGEI 282 + G ++ E L ++++ + P+ ++ + +KR Sbjct: 229 ----TGGDLGWIEEGKLEKDIESVIFDAPEGAILGPFESEGKFVLYKVVEKRSSSYKKFE 284 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKL----RSNAIIHY 316 +K + + K + ++ K+ + N+ I Sbjct: 285 EVKQEIMDKLLADKKNQLWNDWFNKVFEEFKKNSQIEI 322 >gi|255020025|ref|ZP_05292098.1| Peptidyl-prolyl cis-trans isomerase ppiD [Acidithiobacillus caldus ATCC 51756] gi|254970554|gb|EET28043.1| Peptidyl-prolyl cis-trans isomerase ppiD [Acidithiobacillus caldus ATCC 51756] Length = 258 Score = 89.0 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 38/295 (12%), Positives = 85/295 (28%), Gaps = 45/295 (15%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 + +V + + + T+NG+ I + + +++ + VQ L+ Sbjct: 5 SIVLAALVGTFAAPVFAAPVATVNGQAIDNSQVQAILSMSPELAKEPNAREQVVQNLVNM 64 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + Q K + ++ Q + Sbjct: 65 EVLSQYAMKHNLDQSADVK------------------------------ERLALAKRQIL 94 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 V A + + + +EY +R +L + ++ Sbjct: 95 ADAAVDQYIKEHPVPESEIQAAYNKFVAAMGKKEYEVRHILVKTKAEADKILAELKA--- 151 Query: 204 DAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPY 261 K EK++ K G+ +++ + P F + + K + P Sbjct: 152 --------GKKFSTLAEKYSIDKASAAHGGELGWIVPGMVVPPFAEAIEKAPIDKPVGPV 203 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 TQ G I + + L + + + ++ A++V LRS A I Sbjct: 204 QTQFGYHIIEVQATKPLTP--PPLSAMKDRIKAQLQQEEAAKFVSDLRSQAKIDI 256 >gi|170767918|ref|ZP_02902371.1| peptidylprolyl isomerase [Escherichia albertii TW07627] gi|170123406|gb|EDS92337.1| peptidylprolyl isomerase [Escherichia albertii TW07627] Length = 623 Score = 89.0 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 40/396 (10%), Positives = 103/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEK------------ 92 + + L + + LI E L Q + Sbjct: 60 NSERNRMQQQLGDRYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 93 -----SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN--------HFKQYLA 139 D N + G+SA+ ++ L Q F Sbjct: 120 AIFATPAFQVDGKFDNSRYNSILNQMGMSADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 140 IQSIWPDVVKNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + V + + + E EI + ++ KN + R + Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQAVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + Sbjct: 240 AATMQQPVSDADIQSYYDQHQEQFTQPQRMRYSIIQTKTEDEAKAVLAELNKGGDFAALA 299 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 KEKSADIISARNGGDMGWLEDATVPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDVQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 395 >gi|163939063|ref|YP_001643947.1| peptidylprolyl isomerase [Bacillus weihenstephanensis KBAB4] gi|229166104|ref|ZP_04293865.1| Foldase protein prsA 2 [Bacillus cereus AH621] gi|163861260|gb|ABY42319.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus weihenstephanensis KBAB4] gi|228617326|gb|EEK74390.1| Foldase protein prsA 2 [Bacillus cereus AH621] Length = 285 Score = 89.0 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 81/304 (26%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 + F++ + ++S S T IT D K+ LK + L ++ Sbjct: 4 KSTFIITALISILMLSACGQKNDSATIATTTNSTITKSDFEKQ---LKDRYGKDTLYEMV 60 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 Q++I + K + V+ + G F ++ Sbjct: 61 AQDVITKKYK----------VSDDAVDKEVEKAKDQYG------EQFKATLENNRLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLALNEAIKQSVTEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SNENEAKEIKKKLDTGTSFEELAKQESQDLASKDNGGDLGYFGAGKMTPEFEKAAYKLKP 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNA 312 +NP + G I + DK+DL +K + ++ + ++ A Sbjct: 205 GQISNPVKSPNGYHIIKLTDKKDLQPYDKVKDSIRKDLEEERLADPSFGQKLLQDELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 DIKI 268 >gi|322381169|ref|ZP_08055172.1| PrsA-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154745|gb|EFX47016.1| PrsA-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 303 Score = 89.0 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 85/305 (27%), Gaps = 27/305 (8%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 + V+++ C V + + + + I I GD+ Q + Sbjct: 14 LSLAVVVLVCFVIFGFTGAASGNGTVVAEIGKTKIRKGDLE--------QNLITHYGSSV 65 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + +++ K E + +G+ ++ + + E F +Q Sbjct: 66 LNQMLDREAIKMEAQSAGLQISDADIDKELKVMMQ----AYESEEVFYQSMKEQLGMSRQ 121 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + +++ + EI Q ++ + + + N+ Sbjct: 122 EVKDDVYYKLLLEKVATKDIQVSDSEIQDYIQAHPEEYAKKREMHLRRVTTKTREQANKV 181 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD---LHPQFQNLLKKS 253 + + + + G ++ E D + Sbjct: 182 VAA---------FSKGDDFAKLARDRSIDDYANNGGDLGWVKEDDPLTDKQVMKQAKDLK 232 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + P T +G + + + +D G E +K + Q K + KKLR Sbjct: 233 VGQISKPVQTNEGYLIVFLQESKDKGGLDEQTIKETVRKQLALQKAPS-IKDLSKKLREK 291 Query: 312 AIIHY 316 + Sbjct: 292 WNVKI 296 >gi|238788012|ref|ZP_04631808.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia frederiksenii ATCC 33641] gi|238723960|gb|EEQ15604.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia frederiksenii ATCC 33641] Length = 628 Score = 89.0 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 38/399 (9%), Positives = 109/399 (27%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + +++ F + + SY + +NG+ I+ + + + Sbjct: 1 MMDNLRAAANNVVLKIILALIMLSFILTGVGSYLIGGSNDF-AAKVNGQEISRAQLEQAV 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +L + + +L+ L Q +K G+T + V Sbjct: 60 QSERGRLQQQLGEQFSALAANEGYMLQLRQQVLGQLVNNMLLDQYAKKLGLTASDDQVKD 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ----------------------- 141 Q D + +L+ Q+ +Q Sbjct: 120 AIRQAPYFQTDGKFDNNKYLELVNRMGYTPDQFAQLQRQQLINQQLLQAFGDTGFVLPVE 179 Query: 142 -------SIWPDVVK------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + V+ + + E+ A + KN + ++ ++ Sbjct: 180 AQAMSALILQQRDVRLATIDLKALQAQQKVTDEELQAYYDQNKNSFIAPEQMKISFIAMD 239 Query: 189 DNKLQNQG-------------------------------FVQKRIKDAEESRLRLPKDCN 217 +Q++ + K A + + Sbjct: 240 AAAMQDKITVTEDDIAAYYDQHKSSYGQPEQRNYSVIQFKTEAEAKTALDELKKGADFAA 299 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ I + G+ +L + + + ++ + G + + D + Sbjct: 300 MAKEKSTDIISRKNGGELGWLEPETTADELKQANLTEKGQLSDVVKSSVGYLIVRLNDIK 359 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + L+ Q K +K+ A Sbjct: 360 PEQVKPLSEVHDALAKQVKQEKAVDAYYSLQQKVSEAAT 398 >gi|302338942|ref|YP_003804148.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta smaragdinae DSM 11293] gi|301636127|gb|ADK81554.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta smaragdinae DSM 11293] Length = 358 Score = 89.0 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 109/347 (31%), Gaps = 46/347 (13%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTI---NGEVITDGDISKRIALLKLQKINGEL- 72 VL++F + +V S + + T+ E I+ + +RIA + + L Sbjct: 12 LLGVVLVLFFLCGVVFPVSADLVGQTVATVTLTKTEGISSVQLDQRIAQVAAARKKAGLS 71 Query: 73 -----EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 + +I E L KQ E+SGI+ + + + + Q Sbjct: 72 ADGVDRTEVLDAMIAEVLIKQAAERSGISIPQEQIQQVVAKQKASIEQQVGRPLTDRQYQ 131 Query: 128 G-------IGDNHFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPANKQKMKNITVR 176 +K + Q + + ++ F E EI + Sbjct: 132 EVVRSQTGFSWEQYKGSIREQIMQQRYIATEKRDMFEAIQPPTEKEIQDHYDAHATSITN 191 Query: 177 EYLIR---TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIG 232 +R + +I N + Q ++ + R K + + +++ G Sbjct: 192 PEYVRLKQIFIPTISMNDQEKQAARERLESAWTKLRNGSAKFDDLVLQYSEDESSKYRGG 251 Query: 233 KAQYLLESDL-------HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL------- 278 Y+ +D F+ L + + + G+ + + + R+ Sbjct: 252 DVGYIARADQRVEKTYGADFFRKLFSLQTGDYSGVIESNVGLHILKVTEHREARILSLDD 311 Query: 279 ----GGEIALKAYLSAQNTPTKIEKHEAEYV----KKLRSNAIIHYY 317 ++ ++ Y+ A K + + + + L++ A I Y Sbjct: 312 QIAPDNKMTVREYIRAGLFQEKQQAVLKKALDAVVEDLKAEAEIVVY 358 >gi|291278662|ref|YP_003495497.1| hypothetical protein DEFDS_0230 [Deferribacter desulfuricans SSM1] gi|290753364|dbj|BAI79741.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 329 Score = 89.0 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 77/280 (27%), Gaps = 14/280 (5%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL-IVETLKKQEIEKSGIT 96 IN D+ I + K + +L I E +K Q + Sbjct: 42 NLDEAVVVINNNAYYRNDVMNFIYFNFPGVTEDDFNKDNLTQLFINEFIKFQLLLSDVKK 101 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 + + ED I +K+ L I + + Sbjct: 102 NNVKVSSEKLNSIMNKIEKIGEDSFVI--DFPISLEEYKKLLKESLIVKEWLNRLIEKNI 159 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 E E+ K+ + + K LR Sbjct: 160 TVSEDEVKNKYNKIDKTKKSIVKYHVLHIVTANYKDALNARRA---------LLRGKSFK 210 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 K++ G Y++ D+ FQ + + + Y + G + DK+ Sbjct: 211 EVALKYSVGPEKDQGGDLGYIVLDDMPVIFQKIKRLRIKRISPVYKSDYGYHIFQVLDKK 270 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 G LK L + K+EK +YV+ L+ NA I Sbjct: 271 KEVEVGYEVLKPRLYQEIFAEKVEKFINDYVEVLKKNAKI 310 >gi|123443338|ref|YP_001007312.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090299|emb|CAL13165.1| peptidyl-prolyl cis-trans isomerase D [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 628 Score = 89.0 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 37/399 (9%), Positives = 107/399 (26%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + +++ F + + SY + +NG+ I+ + + + Sbjct: 1 MMDNLRAAANNVVLKIILALIMLSFILTGVGSYLIGGSNDF-AAKVNGQEISRAQLEQAV 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +L + + +L+ L Q +K G+T V Sbjct: 60 QSERGRLQQQLGEQFSALAANEGYMLQLRQQVLGQLVNNMLLDQYAKKLGLTASDEQVKD 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY--------------------------L 138 Q D + +L+ Q+ Sbjct: 120 AIRQAPYFQTDGKFDNNKYLELVNRMGYTPDQFAQLQRQQLINQQLLQAFGDTGFVLPVE 179 Query: 139 AIQSIWPDVVKNDF----------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 A + + + + + E+ A + KN + ++ ++ Sbjct: 180 AQAMSELILQQREVRLATLDLKALQAQQKVTDEELQAYYDQNKNSFIAPEQMKISFIAMD 239 Query: 189 DNKLQNQG-------------------------------FVQKRIKDAEESRLRLPKDCN 217 +Q++ + K A + + Sbjct: 240 AAAMQDKITVTEEDIAAYYDQHKSTYTKPEQRNYSVIQFKTEAEAKTALDELKKGADFAA 299 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ I + G+ +L + + + ++ + G + + D + Sbjct: 300 IAKEKSTDIISRKNGGELGWLEPETTADELKQANLTEKGQLSDVVKSSVGYLIVRLNDIK 359 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + L+ Q K +K+ A Sbjct: 360 PAQVKPLSEVHDALAKQVKQEKAVDAYYALQQKVSEAAT 398 >gi|171321062|ref|ZP_02910045.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria MEX-5] gi|171093676|gb|EDT38826.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria MEX-5] Length = 260 Score = 89.0 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 82/278 (29%), Gaps = 47/278 (16%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I +A L + Q + +L++ QEL+ + QE + GI + Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIREGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + F+ K + Sbjct: 85 VKAQV-------------------------------AVAQQTVVLRSMIESFLKKNQPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A ++ + + + + K + + Sbjct: 114 AEVKARYDELVKGAGGNREYHLHHILVDSEQQAKDLIAKIK---------GGAKFEDLAK 164 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F +K + T+ P TQ G I D RD Sbjct: 165 QYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDTPVKTQFGWHIIRADDIRD 224 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + AQ +++ + + LR A I Sbjct: 225 VAP--PPFDQVKAQIAQQLVQQKLQAFEEGLRQQAKIQ 260 >gi|238795538|ref|ZP_04639053.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia mollaretii ATCC 43969] gi|238720657|gb|EEQ12458.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia mollaretii ATCC 43969] Length = 628 Score = 89.0 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 37/399 (9%), Positives = 108/399 (27%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + +++ F + + SY + +NG+ I+ + + + Sbjct: 1 MMDNLRAAANNVVLKILLALIMLSFILTGVGSYLIGGSNDY-AAKVNGQEISRAQLEQAV 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +L + + +L+ L Q +K G+T V Sbjct: 60 QSERGRLQQQLGEQFSALAANEGYMLQLRQQVLGQLVNNMLLDQYAKKLGLTASDEQVKD 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY--------------------------L 138 Q + D + +L+ Q+ Sbjct: 120 AIRQAPYFQTDNKFDNNKYLELVNRMGYTPDQFAQLQRQQLINQQLLQAFGDTGFVLPIE 179 Query: 139 AIQSIWPDVVKNDF----------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 A + + + + + E+ A + KN + ++ ++ Sbjct: 180 AQAMSELILQQREVRLATVDLKALQAQQKVTDEELKAYYDQNKNSFIAPEQMKVSFIAMD 239 Query: 189 DNKLQNQG-------------------------------FVQKRIKDAEESRLRLPKDCN 217 +Q++ + K A + + Sbjct: 240 AAAMQDKITVTEEDIAAYYDQHRSSYTQPERRNYSVIQFKTEAEAKVALDELKKGADFAA 299 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ I + G+ +L + + + ++ + G + + D + Sbjct: 300 MAKEKSTDIISRKNGGELGWLEPETTADELKQANLSEKGQLSDVVKSSVGYLIVRLNDIK 359 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + L+ Q K +K+ A Sbjct: 360 PEQVKPLSEVHDALAKQVKQEKAVDAYYALQQKVSEAAT 398 >gi|329113840|ref|ZP_08242611.1| Cell-binding factor 2 [Acetobacter pomorum DM001] gi|326696850|gb|EGE48520.1| Cell-binding factor 2 [Acetobacter pomorum DM001] Length = 260 Score = 89.0 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 35/282 (12%), Positives = 74/282 (26%), Gaps = 50/282 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQK---INGELEKIAVQELIVETLKKQEIEKSGITFDS 99 T+NGE IT D+ + L Q + + V +L + +K G+ Sbjct: 2 VATVNGEKITLSDVQTAMISLPPQMRQLPPNLIFPMLVNQLADQKAILITAQKEGLDKKP 61 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 T ++ + M + Sbjct: 62 ETQQMMVNAS------------------------------NTALQNAWLSEQVMPHLNDD 91 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 ++ ++ +E R +L + D + Sbjct: 92 AIKQYYDQNYAGKPAEKEVHARHIL-----------VKTEAEANDVIKKLKAGADFGKLA 140 Query: 220 EKFA--SKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNT-TNPYVTQKGVEYIAICDK 275 + + + G + ++D+ P F + + + P +Q G I + D Sbjct: 141 AEVSTDKGSAQQNGGDLGWFKKTDMIPAFSDAAFAMKKGEISSTPVKSQYGYHVIQVLDT 200 Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 R + + I+K+ E V K + I + Sbjct: 201 RTDPV--PTLDSVRDKIRQALIQKYVREAVDKATNQVKIVRF 240 >gi|157964715|ref|YP_001499539.1| protein export protein prsA precursor [Rickettsia massiliae MTU5] gi|157844491|gb|ABV84992.1| Protein export protein prsA precursor [Rickettsia massiliae MTU5] Length = 282 Score = 89.0 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 82/301 (27%), Gaps = 38/301 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + +IF V ++S ++A ++ T G + + I K + ++ Sbjct: 4 LSVIFLSVSMLSGIAFADKDKVVATYKGGEVKESQIMKEFKPQLNLQSGETIKN------ 57 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 ++ N L E+ + + Sbjct: 58 --------------FDDFPPQDQEKLIKIYVNNLLLKEEVAKSNITSSKEFQEKLENAKN 103 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +++ N + + +K + + +L QK Sbjct: 104 QLAQQELLANYIKSNITDKMFDDEYSKYVGNLKGKEQIKVAHIL-----------VKSQK 152 Query: 201 RIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL---LESDLHPQFQNLLKK-SQN 255 D + + E+ + K + G Y+ L P+F+ N Sbjct: 153 EANDIKTKLSKGGNFTKLAEELSLDKASASNGGVVGYILLNQPGQLVPEFEKKAFALKVN 212 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + +K+ + I K + +Y+ L + A + Sbjct: 213 EVSTPVKTDFGWHIIKVLEKKPVP--IPTKEEAKVTIDNILAAEVLKKYISDLEAKADLK 270 Query: 316 Y 316 Sbjct: 271 I 271 >gi|91202462|emb|CAJ72101.1| similar to peptidyl-prolyl cis-trans isomerase (survival protein surA precursor) [Candidatus Kuenenia stuttgartiensis] Length = 328 Score = 89.0 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 94/294 (31%), Gaps = 20/294 (6%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKIN-----------GELEKIAVQELIVETLKKQEI 90 IR ++ +IT ++ KR A + + ++ + ++ELI L +E Sbjct: 31 IRAVVDEAIITQDEVIKRSAAAIREARSKYSEEEFAKNIEKILEYTLEELIDRKLLVKEA 90 Query: 91 EKSG-----ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 +K + + +F++ A S F + QGI K L + Sbjct: 91 QKVFGTDISMMDEVQKELDYFLKGAVENVGSLSKFYEIAESQGINPIERKTELKEDIMID 150 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNIT-VREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 ++K + K + + + ++ + + ++ + Sbjct: 151 KIIKENVNNKVKVPPKLLRRYYMENMDEFCQKKEIKLRHIMIKFSTHDNDKAKTYAFAEK 210 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 + ++ + G+ + L + ++++ N + + Sbjct: 211 IMTLLSTGEDFSSVARSYSEGPNAEKGGEWSFDEIQGLRKELRDVVNSLKDNEYSKITES 270 Query: 264 QKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 G + R + ++ + + +I + + +Y+ LR +A I Sbjct: 271 PVGYHIFKVELIRPEVVKKFEDVQDEIYKKLYREEIGRLKKKYILDLREDAFIK 324 >gi|46397002|sp|Q97E99|PRSA_CLOAB RecName: Full=Foldase protein prsA; Flags: Precursor gi|325510620|gb|ADZ22256.1| peptidylprolyl isomerase [Clostridium acetobutylicum EA 2018] Length = 333 Score = 89.0 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 47/330 (14%), Positives = 104/330 (31%), Gaps = 38/330 (11%) Query: 14 KLLTTYFVLIIFCIVPIVSYK----SWAMSSRIRTTI-NGEVITDGDISKRIALLKLQKI 68 K + T ++ +F + A++S++ TI + IT G+I K Q Sbjct: 5 KQIATALLVGMFTFSAVGCSMVEKRPEAINSKVVATIYGNQTITRGEIDKLAKGTVEQLK 64 Query: 69 NG----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + ++ + LI + + ++ + IT + + Sbjct: 65 SQYGDSYEKNEEAVAALKKQKEQILTSLIDQKIFLKKAKDQKITLTKDEIKTNVDDVYAQ 124 Query: 113 TGLSAEDFSSFLDK---QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + S F + G FK L ++I +++ + + E Sbjct: 125 YQQEFKTESEFKSQLSQYGYTVAEFKDQLKNRAISNKLIQQ-VVKDVKVSDDEAKKYYDS 183 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 KN + + + + + + + + ++ ++ Sbjct: 184 HKNSYTQSPNTVHLAHILVKTEKEAKAVKARI--------DKGEDFATVAKQVSTDGSKE 235 Query: 230 SIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIAL 284 G + E+D + LK + N + P TQ G I K + + ++ Sbjct: 236 KGGDLGDIQENDSNYDKTFMAAALKLNDNQVSAPVHTQFGWHVIKCIKKTEYPVKDFNSV 295 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + TK + + +KK S A I Sbjct: 296 KDDIKQTVLSTKQKSVYQKTLKKWESQANI 325 >gi|40063240|gb|AAR38067.1| PPIC-type PPIASE domain protein [uncultured marine bacterium 577] Length = 263 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 87/309 (28%), Gaps = 53/309 (17%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING- 70 IK L + + V ++ + +NG+ I + + + L Q Sbjct: 3 LIKFLKLTAIFLPALAVVTTTHAAP------LAKVNGKTIPNSRLELVMKNLISQGQKDT 56 Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 E K +LI + + QE + + D + Sbjct: 57 PETRKAIRDDLIKQEVLSQEALRKKLDKDPDISTQIM----------------------- 93 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + QS+ ++ DF+ K E E+ Q + ++ + I Sbjct: 94 --------ITRQSVLIRALQADFIKKNDPSEKELRDEYQAVSAASMGDQEYNPSHILIST 145 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQF-Q 247 + + + K + + G+ + F + Sbjct: 146 EAEAKDIIAKIK---------KGGKFEEIAKDRSIDDGSKNKGGELGWSSARSYAQPFAE 196 Query: 248 NLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 L+K + T P + G I R L I + + +++ Y++ Sbjct: 197 ALVKLKKGEITQAPVKSSFGWHVIRSNGMRPLK--IPPFKEVKQKVQQRILQQKFQAYLE 254 Query: 307 KLRSNAIIH 315 +L+ A I Sbjct: 255 ELKDKAKIE 263 >gi|145218834|ref|YP_001129543.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Prosthecochloris vibrioformis DSM 265] gi|145204998|gb|ABP36041.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium phaeovibrioides DSM 265] Length = 439 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 30/276 (10%), Positives = 77/276 (27%), Gaps = 14/276 (5%) Query: 47 NGEVITDGDISKRIALLKLQKI----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 G+VI ++ R + +LQ + L + LI + + + ++ N + Sbjct: 36 GGDVIFRSELDSRETMTRLQYPDLKDDRSLRSSILDGLINQKIILAKARIDSVSISENDI 95 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV---KNDFMLKYGNL 159 R + G ++ LA + ++ + Sbjct: 96 ASSADARLRQLSRRFSSKEDMERQFGKSIEGIRRDLAGEIRSQQMIETLRRQKFSGVTIG 155 Query: 160 EMEIPANKQKM---KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 E+ + + E +L + +K ++ Sbjct: 156 YGEVMSFYRDNRDAMPTLPEEVSFSQILKFPGVTRAAKASARKKIEDIEKKFTTGFLSFD 215 Query: 217 NKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICD 274 +++ G ++ +L F++ + + T+ G I Sbjct: 216 ELARRYSDDPGSAQLGGDLGFVQRGELVKPFEDAAYGLKDGHVSGIVETRYGFHIIQRLG 275 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + I ++ L A + + E ++ +RS Sbjct: 276 REGRS--IHVRHILVAFDRSDRDEAETVALLEAIRS 309 Score = 42.4 bits (97), Expect = 0.099, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 48/159 (30%), Gaps = 17/159 (10%) Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 R +R +L + + V K++ S+G Sbjct: 276 REGRSIHVRHILVAFDRSDRDEAETVALLEAIRSGLLEGKGSFAEMARKYSDDPVSASLG 335 Query: 233 --------KAQYLLESDLHPQFQNLLK--KSQNNTTNPYVT--QKG---VEYIAICDKRD 277 YL L P+ Q ++ ++Q ++P +G + ++R Sbjct: 336 GAVLASGSSRPYLDPRSLRPELQAIIGGLRTQGEISHPRKITPPRGEPFYGMFRLNERRL 395 Query: 278 LGGEIALKAY--LSAQNTPTKIEKHEAEYVKKLRSNAII 314 K Y L K ++ E+V +LRS + Sbjct: 396 PHTLDPEKDYAMLEQLALDDKKQRLFNEWVSELRSEVFV 434 >gi|302380403|ref|ZP_07268872.1| PPIC-type PPIASE domain protein [Finegoldia magna ACS-171-V-Col3] gi|303235180|ref|ZP_07321799.1| PPIC-type PPIASE domain protein [Finegoldia magna BVS033A4] gi|302311807|gb|EFK93819.1| PPIC-type PPIASE domain protein [Finegoldia magna ACS-171-V-Col3] gi|302493667|gb|EFL53454.1| PPIC-type PPIASE domain protein [Finegoldia magna BVS033A4] Length = 250 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 82/286 (28%), Gaps = 46/286 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLK---LQKINGELEKIAVQELIVETLKKQEIEKSG 94 +I +NGE I ++ I L Q N E K ELI L + +K+G Sbjct: 4 NKDKILAVVNGEEIKQSEVDNFIQALGYRGAQFNNEEGRKRLTDELINRKLLFFDAKKTG 63 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 + D V + + D + + Sbjct: 64 LDKDEIYVKEV-------------------------------KKQSEELLKDFAMANIIN 92 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + E+ + K+ + + K+ +E Sbjct: 93 SVRVSDDELKEYYESHKDNFKVQPTFTASHIL---------VESEDLAKEIKEKIDNDGD 143 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAIC 273 +++++ G + + +F+N L +++ + P TQ G I I Sbjct: 144 FAQLAKEYSTCPSKEQGGDLGTFQQGQMVKEFENALIENEIGDIVGPVKTQFGYHIINIK 203 Query: 274 DKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 DK + + K + K ++ + +L+ I + Sbjct: 204 DKTEGKVKSFEEAKNEVKQTLLQLKQQQAYIDATDRLQKEYKIEKF 249 >gi|169824601|ref|YP_001692212.1| peptidil-prolyl cis-trans isomerase [Finegoldia magna ATCC 29328] gi|167831406|dbj|BAG08322.1| peptidil-prolyl cis-trans isomerase [Finegoldia magna ATCC 29328] Length = 250 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 82/286 (28%), Gaps = 46/286 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLK---LQKINGELEKIAVQELIVETLKKQEIEKSG 94 +I +NGE I ++ I L Q N E K ELI L + +K+G Sbjct: 4 NKDKILAVVNGEEIKQSEVDNFIQALGYRGAQFNNEEGRKRLTDELINRKLLFFDAKKTG 63 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 + D V + + D + + Sbjct: 64 LDKDEIYVKEV-------------------------------KKQSEELLKDFAMANIIN 92 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + E+ + K+ + + K+ +E Sbjct: 93 SVRVSDDELKEYYENHKDNFKVQPTFTASHIL---------VESEDLAKEIKEKIDNDGD 143 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAIC 273 +++++ G + + +F+N L +++ + P TQ G I I Sbjct: 144 FAQLAKEYSTCPSKEQGGDLGTFQQGQMVKEFENALIENEIGDIVGPVKTQFGYHIINIK 203 Query: 274 DKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 DK + + K + K ++ + +L+ I + Sbjct: 204 DKTEGKVKSFEEAKNEVKQTLLQLKQQQAYIDATDRLQKEYKIEKF 249 >gi|229056898|ref|ZP_04196294.1| Foldase protein prsA 2 [Bacillus cereus AH603] gi|228720426|gb|EEL71999.1| Foldase protein prsA 2 [Bacillus cereus AH603] Length = 285 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 81/304 (26%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 + F++ + I+S S T IT D K+ LK + L ++ Sbjct: 4 KSTFIITALISILILSACGQKNDSATIATTTNSTITKSDFEKQ---LKDRYGKDTLYEMV 60 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 Q++I + K + V+ + G F ++ Sbjct: 61 AQDVITKKYK----------VSDDAVDKEVEKAKDQYG------EQFKATLENNRLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLALNEAIKQSVTEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SNENEAKEIKKKLDTGTSFEELAKQESQDLASKDNGGDLGYFGAGKMTPEFEKAAYKLKP 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNA 312 +NP + G I + DK+DL +K + ++ + ++ A Sbjct: 205 GQISNPVKSPNGYHIIKLTDKKDLQPYDKVKDSIRKDLEEERLADPSFGQKLLQDELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 DIKI 268 >gi|186475780|ref|YP_001857250.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia phymatum STM815] gi|184192239|gb|ACC70204.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia phymatum STM815] Length = 642 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 37/397 (9%), Positives = 93/397 (23%), Gaps = 103/397 (25%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR---------- 59 + + +L V I ++ + S ++NG IT G+ Sbjct: 9 QRLMMFMLILVILPGLGFVGIQGFRGFFDESANVASVNGHKITRGEFDNAWRQQMDRARQ 68 Query: 60 ---IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR----- 111 E K + LI + + E ++ +T + + + Sbjct: 69 MLGAQFDAKMFDTPERRKDMLDGLIQQRVLADETQRLHLTVSDDALRRALLADPVIGSLK 128 Query: 112 --NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV---------------------- 147 + + + L QGI + +++ + + Sbjct: 129 NPDGSIDVNKYKELLAMQGITPDQYQEQVRYSMSMQQLPAAITQTSFTPKTLAQHLTELA 188 Query: 148 -----------VKNDFMLKYGNLEMEIPANKQKMKNIT---------------------- 174 ++ K + +I A ++ Sbjct: 189 EQQREVQGLAFRAKEYESKVQPTDAQIQAYYDAHRDDFATPATATIQYLVLSPATLAAAA 248 Query: 175 -------VREYLIRTVLFSIPDNKLQNQ-----------GFVQKRIKDAEESRLRLPKDC 216 + Y F P + +K + A E ++ Sbjct: 249 NPSDAELKKYYDDNIAHFRTPGEVRASHILIVAPKDASSADKEKAKQKAREVLAQVKAHP 308 Query: 217 NKLEKFASKI-----HDVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVE 268 ++ + A + G Y + + K ++ ++ + G Sbjct: 309 DQFAQLAQQNSQDPGSASKGGDLGYFSPGMIAGGKAFDDAVFKMKKDEVSDLIQSDFGYH 368 Query: 269 YIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAE 303 + + D R +K ++ K + Sbjct: 369 IVKVTDVRPSVTKPFEEVKDSIAKDLKAQLATKAFGD 405 >gi|310828352|ref|YP_003960709.1| foldase protein PrsA [Eubacterium limosum KIST612] gi|308740086|gb|ADO37746.1| foldase protein PrsA [Eubacterium limosum KIST612] Length = 253 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 37/285 (12%), Positives = 79/285 (27%), Gaps = 47/285 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQK----INGELEKIAVQELIVETLKKQEIEKS 93 M ++ + G+ I + D+ I L ++ E + ++EL+ + L E +K Sbjct: 1 MEKQVVAVVEGKEIYNTDLEALIQQLPQEQQGQFRTKEGRRKLLEELVAQELFYLEGKKD 60 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + A + + + FM Sbjct: 61 HEDESEEYLA-------------------------------LVEDAKEKLLKSHMIAKFM 89 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E+ + + IR +P Q+ I +E + Sbjct: 90 KNVEVSDEEVKKFYDENPKQFIAPDSIRASHILLPSE--------QQAIDIIKEIKDGGK 141 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTT-NPYVTQKGVEYIA 271 + ++ G Y + + PQF+N + P T G I Sbjct: 142 TFEEAAKAYSVCPSREQGGDLSYFSKGKMVPQFENAAFAMKVGEMSDEPVKTDFGWHIIK 201 Query: 272 ICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + D + + +K K + + V +L+ + Sbjct: 202 VTDSKTSETIPYDVVKESARQYLLEQKQNRAFLDRVDELKKEYDV 246 >gi|187917986|ref|YP_001883549.1| basic membrane protein [Borrelia hermsii DAH] gi|119860834|gb|AAX16629.1| basic membrane protein [Borrelia hermsii DAH] Length = 344 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 104/341 (30%), Gaps = 37/341 (10%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKL 65 + + + + ++F IV I S+ + IN E+IT + ++ LK Sbjct: 2 IDIKVIFMGNFLCFLLFFIVGITSFAQ----NTPVVIINLHSNEIITKTEFDSKVNTLKK 57 Query: 66 QKI---NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 + + K +Q LI + L QE K GI V L+ E Sbjct: 58 TQGRDLSNAERKQVLQILIADVLFGQEALKQGIKVGDEEVMQTIRAQFGLASLTDEQIRQ 117 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPANKQKMKNITVREY 178 ++ QG N + ++ + F E E+ + K V Sbjct: 118 MIESQGTNWNELLSSMKRSLSAQKLILKMAQPKFSEIKTPSEKEVIEYYEANKTKFVNPD 177 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 + R + + K A + + + + K+++ G +L Sbjct: 178 ISRISHVFFSSKDKKRSEILTKAKDIANQIKSKKITFEEAVRKYSNDEGSKAKNGDLGFL 237 Query: 238 LESDLH-------PQFQNLLKKSQNNTTNPYVTQKGVEYIAIC-----------DKRDLG 279 D + + + ++ + + P +++G + + DK Sbjct: 238 ARGDQNAQNVLGLDFIKEVFMLNKGDISQPISSKEGFHIVKVTEMYSQRFLGLQDKISPN 297 Query: 280 GEIALKAYLSAQNTPTKIEKHE----AEYVKKLRSNAIIHY 316 + +K + ++ E KL +A I Sbjct: 298 VNMTVKDAIKNNMVNIHQQQIVARVQQEIYDKLNKSASIQI 338 >gi|325279465|ref|YP_004252007.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Odoribacter splanchnicus DSM 20712] gi|324311274|gb|ADY31827.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Odoribacter splanchnicus DSM 20712] Length = 445 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 30/289 (10%), Positives = 85/289 (29%), Gaps = 13/289 (4%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETLKKQE 89 + + +I + E+I DI + Q + + + +++ +V+ L + Sbjct: 18 FAQKNVIDKIVAIVGDEIILQSDIENAFLQQQGQGIISSSPDYKAEILEQQLVQKLLMAQ 77 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP---D 146 + I V + G K + + Sbjct: 78 AQIDSIIVSDEEVENAVSSQIEFFISNIGSQERLEKYFGKSIQEIKDDMRNPLKEQLITE 137 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 ++ + K E+ + +K+ ++ + R L I ++ ++ + Sbjct: 138 QMQQKIVEKIRITPSEVRSYFKKIPKDSLPDMPDRYELQQIVLKPDVSEAEKERIREQLR 197 Query: 207 ESRLRL----PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPY 261 R ++ ++ G+ Y + +L P F + + Sbjct: 198 SFRDQILKGEKTFNTLAVLYSEDASAPRGGELGYKSKKELDPAFAEAAFSLKPGKISKII 257 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 ++ G I + D+ G +I ++ + ++ + +R Sbjct: 258 ESEYGFHIIQLIDR--QGEKINVRHIILQPKVSDTEKQEALNRLDTIRQ 304 Score = 40.8 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 20/288 (6%), Positives = 81/288 (28%), Gaps = 17/288 (5%) Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + IT ++ + + ++ +Q+++++ + ++ + + Sbjct: 143 IVEKIRITPSEVRSYFKKIPKDSLPDMPDRYELQQIVLKPDVSEAEKERIREQLRSFRDQ 202 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 L+ +G + + + +E E Sbjct: 203 ILKGEKTFNTLAVLYSEDASAPRGGELGYKSKKELDPAFAEAAFSLKPGKISKIIESEYG 262 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + ++ + + +R ++ + + Q + + + F++ Sbjct: 263 FHIIQLIDRQGEKINVRHIILQPKVSDTEKQEALNRLDTIRQYITDGKMTFEEAAYYFST 322 Query: 225 KIHDVSIGKAQ--------YLLESDLHPQFQNL-LKKSQNNTTNPYVT----QKGVEYIA 271 + G + D+ K + P+++ Q+ + + Sbjct: 323 DKKTRNNGGLFADPQTSEARIARPDIPGDMAREVNKMKPGEISQPFISHTNGQEEYKIVK 382 Query: 272 ICD---KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + + + + K + +++K+ +++ IH Sbjct: 383 IKEFYPRHKANLDDDWQN-FELMLKREKQMEKLEKWIKEKQADTYIHI 429 >gi|126699880|ref|YP_001088777.1| putative protein export chaperone [Clostridium difficile 630] gi|255101406|ref|ZP_05330383.1| putative protein export chaperone [Clostridium difficile QCD-63q42] gi|115251317|emb|CAJ69148.1| Peptidyl-prolyl cis-trans isomerase, PpiC-type [Clostridium difficile] Length = 380 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 28/298 (9%), Positives = 84/298 (28%), Gaps = 16/298 (5%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE----LIVETL 85 + + SS + TI + IT + KR+ L + ++ +I + Sbjct: 78 LPATSKHYNSSEVVATIGDKKITGEMLRKRMEPLFYLNAKTTMTDDEIRSYESNMIETMI 137 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + + N N S E ++ + + + Sbjct: 138 TSDILSSEAAKEKISITNDQLDAQYNNLMSSIESAMGMTKEEFLKQFDLTEKYIKDDMKK 197 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK-----LQNQGFVQK 200 ++V + ++ + + + N + +L D+K + ++K Sbjct: 198 ELVASKYLNEKSKVTDKEAENYYNKNKSNYLQVRASHILIKTVDDKGKQVSSSKKAELKK 257 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT- 258 ++ + +K++ S G + + + F+ + + Sbjct: 258 EAEEILKKAQAGEDFATLAKKYSEDSSAESGGDLGFFGKGQMVESFEKAAFALKKGEVSN 317 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G I D++ + + + + + ++ L+ + Sbjct: 318 KLVESDYGYHIIKKTDEKYQP-----FEEVKSDLVSSLTSEKQNLLIQNLKEKYNVKI 370 >gi|90424410|ref|YP_532780.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisB18] gi|90106424|gb|ABD88461.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisB18] Length = 347 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 30/285 (10%), Positives = 80/285 (28%), Gaps = 27/285 (9%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + + K+ A + + ++ DI +A L + + A+ Sbjct: 68 LTTGKTAAGRGDVVARVGNSNVSADDIRSYVAALGPRDQAALAQDPAL------------ 115 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 ++ N + E + D+Q + + + Sbjct: 116 ------------LSQAVRMLLANRLVLQELLAKKWDQQQSVAAQLDRVRESALVELYLQS 163 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 E E+ ++ + + + K ++ K E + Sbjct: 164 ASTPPTNFPGEDELQKVYDANRSALLVPRQFQLAQIFVAAPKDADKATEDNANKSLNEIQ 223 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVE 268 +L A++ + G +L E+ + P+ + + ++N ++P G Sbjct: 224 RQLKTPGADFAAIANENDGKNSGDLGWLAENQIRPEIRAQLMGMAKNAISDPVRLDDGWH 283 Query: 269 YIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + D + ++ L Q + Y+ +L Sbjct: 284 ILKLIDTKAAYTRTLPEVRDQLIQQMRAERATMLRQAYLTELLKR 328 >gi|170703395|ref|ZP_02894173.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria IOP40-10] gi|170131694|gb|EDT00244.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria IOP40-10] Length = 260 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 82/278 (29%), Gaps = 47/278 (16%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I +A L + Q + +L++ QEL+ + QE + GI + Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIREGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + F+ K E Sbjct: 85 VKAQV-------------------------------AVAQQTVVLRSMIESFLKKNQPTE 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A ++ + + + + K + + Sbjct: 114 AEVKARYDELVKGAGGNREYHLHHILVDSEQQAKDLIAKIK---------GGAKFEDLAK 164 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F +K + T+ P TQ G I D RD Sbjct: 165 QYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDTPVKTQFGWHIIRADDIRD 224 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + AQ +++ + + LR A I Sbjct: 225 VAP--PPFDQVKAQIAQQLVQQKLQAFEEGLRQQAKIQ 260 >gi|251772782|gb|EES53344.1| putative peptidyl-prolyl cis-trans isomerase [Leptospirillum ferrodiazotrophum] Length = 307 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 20/306 (6%), Positives = 63/306 (20%), Gaps = 31/306 (10%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------KLQ 66 + + + IF + + A T+ G+ ++ D+ + + Sbjct: 1 MTARFRLAFIFLFLAASCHAKEAPLEGAVATLAGQPVSVADLRETARFMGVGGVADRPFT 60 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 K +E I + L + ++ GI+ + + + + Sbjct: 61 TWTPAFAKTVFEETIYDRLLAEAAQRQGISVSPKEIQEEKKRILAISAPEGGRPVELSE- 119 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + + ++ + N Y Sbjct: 120 --------------ELVRKKLLLAKAAEQVAPAPEISRKAALAEYNRRKGHYETPERALV 165 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + + G ++ F Sbjct: 166 RDIVVRSEDEGKA-----ILTALAAGNSFSALARAKSLSPEGAKGGLLPPYALGEMPALF 220 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEY 304 + + G + + ++ + + A++ Sbjct: 221 ALAFSMKPGEVSPLLSSPYGYHILKLVKILPSADLPFRKVRDRIERHLREKAQREALAQW 280 Query: 305 VK-KLR 309 + K+R Sbjct: 281 LAGKIR 286 >gi|186475788|ref|YP_001857258.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia phymatum STM815] gi|184192247|gb|ACC70212.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia phymatum STM815] Length = 259 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 79/278 (28%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I +A L Q +L++ +EL+ + QE + GI Sbjct: 25 IAVVNGTPIPKSRADALVAQLVQQGQQDSPKLQQAVREELVNREILMQEAIREGIPSKPE 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + ++ K + Sbjct: 85 VKAQV-------------------------------AVAQQTVVLRALIESYVKKNQPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A ++ + + +++ KD + + Sbjct: 114 AEVKAKYDELVKQIGGKEYHLHHILV----------ENEQQAKDLIAKIKGGASFEDLAK 163 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRD 277 +F+ + G + P+F +K + T P TQ G I + D R Sbjct: 164 QFSKDPGSGKNGGDLDWSDPKAYVPEFAAAAEKLQKGQMTDEPVHTQFGWHIIRVDDVRQ 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + AQ ++ + + LR+ A + Sbjct: 224 TPP--PPFEQVKAQIAQQMQQEKLQAFEENLRAKAKVQ 259 >gi|58040109|ref|YP_192073.1| peptidyl-prolyl cis-trans isomerase precursor [Gluconobacter oxydans 621H] gi|58002523|gb|AAW61417.1| Peptidyl-prolyl cis-trans isomerase precursor [Gluconobacter oxydans 621H] Length = 308 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 34/270 (12%), Positives = 65/270 (24%), Gaps = 50/270 (18%) Query: 43 RTTINGEVITDGDISKRIALLKLQK---INGELEKIAVQELIVETLKKQEIEKSGITFDS 99 T+NG IT GD+ + L Q L + V +L+ + + EK G+ Sbjct: 51 IATVNGAKITLGDVQRAAGNLPPQARQIQPSVLVPLIVNQLVDQKAVQFAAEKEGLNHKP 110 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + A + ++ + Sbjct: 111 DVKAAMDAAAANALQNA------------------------------YLEEKVGPLVTDS 140 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 M E R +L + + KD + Sbjct: 141 AMHDFYQSHYANKKPEEEIHARHIL-----------VDSEAQAKDIIAQLGKGADFGKLA 189 Query: 220 EKFASK--IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + G + + D+ P F N + P TQ G I + Sbjct: 190 AQLSKDKGSAGANGGDLGWFKKEDMLPAFSAAAFAMKPNTISQTPVHTQYGWHVIQVLAT 249 Query: 276 R--DLGGEIALKAYLSAQNTPTKIEKHEAE 303 R + + + + K+ Sbjct: 250 RTAPIPTFDQVHDQVRQELIRDKVRDIVQA 279 >gi|296450315|ref|ZP_06892075.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP08] gi|296878727|ref|ZP_06902731.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP07] gi|296260876|gb|EFH07711.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP08] gi|296430301|gb|EFH16144.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP07] Length = 380 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 28/298 (9%), Positives = 85/298 (28%), Gaps = 16/298 (5%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE----LIVETL 85 + + SS + TI + IT + KR+ L + ++ +I + Sbjct: 78 LPATSKHYNSSEVVATIGDKKITGEMLRKRMEPLFYLNAKTTMTDDEIRSYESNMIETMI 137 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + + N N S E ++ + + + Sbjct: 138 TSDILSSEAAKEKISITNDQLDAQYNNLMSSIESAMGMTKEEFLKQFDLTEKYIKDDMKK 197 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK-----LQNQGFVQK 200 ++V + ++ + + + N + +L D+K + ++K Sbjct: 198 ELVASKYLNEKSKVTDKEAENYYNKNKNNYLQVRASHILIKTVDDKGKQVSNSKKAELKK 257 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT- 258 ++ + +K++ S G + + + F+ + + Sbjct: 258 EAEEILKKAQAGEDFATLAKKYSEDSSAESGGDLGFFGKGQMVESFEKAAFALKKGEVSN 317 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G I D++ + + + + ++ ++ L+ + Sbjct: 318 KLVESDYGYHIIKKTDEKYQP-----FEEIKSDLVSSLTSEKQSLLIQNLKEKYNVKI 370 >gi|304382089|ref|ZP_07364600.1| peptidyl-prolyl cis-trans isomerase [Prevotella marshii DSM 16973] gi|304336687|gb|EFM02912.1| peptidyl-prolyl cis-trans isomerase [Prevotella marshii DSM 16973] Length = 473 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 33/270 (12%), Positives = 76/270 (28%), Gaps = 15/270 (5%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQEIE 91 ++ + + E I D+ + + K G+ + ++L V+ L + Sbjct: 43 NPASVIDEVIWVVGDEPILKSDVEMMRQQGEAEGMKFPGDPDCSIPEQLAVQKLFLHQAA 102 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV--- 148 I+ +N Q + + +Q L ++ Sbjct: 103 LDSISVTETEINQSIDQQINYWIQMIGSREKLEEYRKQSITQIRQELHDDFKNRQMIHKM 162 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + E+ A + M ++ + I Q + + + + Sbjct: 163 REKLVEGISVTPGEVRAYFRDMPKDSIPFVPTEVEVQIITRTPKIPQEEINRVKDELRQY 222 Query: 209 RLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKKSQN--NTTNPY 261 R+ K A G+ Y L P F ++ + + Sbjct: 223 TERVNKGETSFATLARLYSEDPGSARQGGELDYTGRGMLDPAFASVAFNLTDPKKISKVV 282 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 T+ G I + DKR G+ ++ + Sbjct: 283 ETEFGYHIIQLIDKR---GDKVKVRHILKK 309 >gi|229586913|ref|YP_002845414.1| Protein export protein prsA precursor [Rickettsia africae ESF-5] gi|228021963|gb|ACP53671.1| Protein export protein prsA precursor [Rickettsia africae ESF-5] Length = 282 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 82/301 (27%), Gaps = 38/301 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + +IF V ++S ++A ++ T G + + I K + ++ Sbjct: 4 LSVIFLSVSMLSGIAFADKDKVVATYKGGEVKESQIMKEFKPQLNLQSGETIKN------ 57 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 ++ N L E+ + + Sbjct: 58 --------------FDDFPPQDQEKLIKIYINNLLLKEEVAKSNITSSKEFQEKLENAKN 103 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +++ N + + NK + + +L QK Sbjct: 104 QLAQQELLANYIKSNITDKMFDDEYNKYVGNLKGKEQIKVAHIL-----------VKSQK 152 Query: 201 RIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL---LESDLHPQFQNLLKK-SQN 255 D + + E+ + K + G Y+ L P+F+ N Sbjct: 153 EANDIKTKLSKGGNFTKLAEELSLDKASASNGGVIGYILLNQPGQLVPEFEKKAFALKVN 212 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + +K+ + I K + +Y+ L + A + Sbjct: 213 EVSTPVKTDFGWHIIKVLEKKPVP--IPTKEEAKVTIDNILAAEILKKYIADLEAKANLK 270 Query: 316 Y 316 Sbjct: 271 I 271 >gi|282882218|ref|ZP_06290857.1| foldase protein PrsA [Peptoniphilus lacrimalis 315-B] gi|281297983|gb|EFA90440.1| foldase protein PrsA [Peptoniphilus lacrimalis 315-B] Length = 375 Score = 88.2 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 35/300 (11%), Positives = 87/300 (29%), Gaps = 14/300 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK-INGELE 73 L + V ++ ++ + + +N I D K A+ + Q N + Sbjct: 2 FLKKFTVAVLSGLMLVSLSACGKGPEGVAAKVNDVEIPMEDFYKSYAIRRNQYVANAGGD 61 Query: 74 KIAVQELIV----ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + ++ I ++ + IT T Q A + ED Sbjct: 62 ESVLEGPIDPTGKQSKLTVDQYLKDITIKDLTETEIIKQDAAANNIKVEDSEIQKILDQY 121 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKY------GNLEMEIPANKQKMKNITVREYLIRTV 183 + + D++ + + K+ + V++Y Sbjct: 122 KAQLGGDEQFKAYLDSLGIPLDYLKEVLKNQTLVGKYTQEKNKNIKVTDDDVKKYYDEHK 181 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 K+ + ++ + K +K + + G + Sbjct: 182 DDFFKAKASHILVDDLKKANEIKKEIDKGAKFEEMAKKESKDTGSATNGGDLGEFTNGQM 241 Query: 243 HPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 F + + K + ++P + G I + +++ + +K + ++ T K EK Sbjct: 242 VQSFNDAIKKMEKGEISDPIKSDFGFHIIKLKERKPRTFDE-VKDEIKSKLTQEKYEKAI 300 >gi|260909467|ref|ZP_05916171.1| peptidyl-prolyl cis-trans isomerase [Prevotella sp. oral taxon 472 str. F0295] gi|260636392|gb|EEX54378.1| peptidyl-prolyl cis-trans isomerase [Prevotella sp. oral taxon 472 str. F0295] Length = 483 Score = 88.2 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 29/293 (9%), Positives = 79/293 (26%), Gaps = 16/293 (5%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQEIE 91 ++ + + E I D+ + + K G + ++L V+ L + Sbjct: 51 PEASVVDEVIWVVGDEPILKSDVEAARLQAENEGHKFKGNPDCSIPEQLAVQKLFLHQAA 110 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV--- 148 + + ++ + + + +Q + ++ Sbjct: 111 IDSLEVSESEISQGIEEQINYWIQMVGSKEKLEEYRKQTITEMRQSMHDDYKNNRLIAMM 170 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 K + ++ + + ++ + I N V + E Sbjct: 171 KEKLVSDVKVSPADVRKFFKDLPADSIPMVPTMVEVEIITQNPKVKTEEVNRVKDQLREY 230 Query: 209 RLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKK--SQNNTTNPY 261 R+ K A G+ + + P F + N + Sbjct: 231 TDRVTKGETTFATLARLYSEDPGSARQGGELGFTGRAAFDPAFAAVAFNLTDPNKISKIV 290 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE-KHEAEYVKKLRSNAI 313 T+ G I + DKR G+ ++ + ++ + + + S+ Sbjct: 291 ETEFGYHIIQLIDKR---GDKVNVRHILLKPNVSQDDIDRSKARLDSIASDIK 340 >gi|138894238|ref|YP_001124691.1| protein export protein prsA [Geobacillus thermodenitrificans NG80-2] gi|196251144|ref|ZP_03149822.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp. G11MC16] gi|226712005|sp|A4IKU2|PRSA_GEOTN RecName: Full=Foldase protein prsA; Flags: Precursor gi|134265751|gb|ABO65946.1| Protein export protein prsA [Geobacillus thermodenitrificans NG80-2] gi|196209342|gb|EDY04123.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp. G11MC16] Length = 278 Score = 88.2 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 31/304 (10%), Positives = 86/304 (28%), Gaps = 41/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + + +S + S + T NG IT + + + K Sbjct: 1 MKKWMMATAVVSLMALSACNNGDSEAVVETKNG-AITKDEFYNEMK--------ERVGKT 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 +++LI E + ++ + + D + + + Sbjct: 52 VLRDLIDEKVLSKKYKVTDEEIDREIERI--------------KEAYGTQYDLAVQQNGE 97 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + + + E+ + + +L Sbjct: 98 KVIREMIKLDLLRAKAAIEDIKVTDKELKEYY----DNYKPKVRASHIL----------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 +K K+ + + ++++ + G + + +F+ K Sbjct: 143 VEDEKTAKEVKAKLDKGEDFAKLAKEYSQDPGSASNGGDLGWFGAGKMVKEFEEAAYKLK 202 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE-KHEAEYVKKLRSNA 312 ++P T G I + DK +K ++ + +K++ V KL +A Sbjct: 203 VGEVSDPIKTDYGYHIIKVTDKEKKKTFDKMKEEITFEVKRSKLDPSTMQSKVDKLVKDA 262 Query: 313 IIHY 316 + Sbjct: 263 NVKI 266 >gi|262278898|ref|ZP_06056683.1| ppic-type ppiase domain-containing protein [Acinetobacter calcoaceticus RUH2202] gi|262259249|gb|EEY77982.1| ppic-type ppiase domain-containing protein [Acinetobacter calcoaceticus RUH2202] Length = 351 Score = 88.2 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 28/270 (10%), Positives = 82/270 (30%), Gaps = 6/270 (2%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 I+D D+ LK + L + + + +S + + + Sbjct: 73 KISDQDVEN---FLKSPQGQAALGNQVRVIHMRIAGENPQEVQSVAQEVRSNLAQSNDIN 129 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 A +A D + LA + + ++ + + ++K Sbjct: 130 ALKKLSTANVKVEGADMGFRPLSDIPAELAARITPLQDGQTTDLISVRDGVHVLKLIERK 189 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HD 228 +T I +++ + ++ I + + +++ Sbjct: 190 QNEQKALVPQFQTRHILIQPSEVVSLENAKQIIDNIYKRLKAGDDFATLAATYSNDTGSA 249 Query: 229 VSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKA 286 G ++ + P+F + + + + P+ TQ G + + +KR+ + Sbjct: 250 RDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHILQVTEKREKDMTHEYQER 309 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +++++R+NA + Sbjct: 310 MARQILGERQFNTEIDSWLREVRANAYVEI 339 >gi|154494371|ref|ZP_02033691.1| hypothetical protein PARMER_03726 [Parabacteroides merdae ATCC 43184] gi|154085815|gb|EDN84860.1| hypothetical protein PARMER_03726 [Parabacteroides merdae ATCC 43184] Length = 454 Score = 88.2 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 28/274 (10%), Positives = 83/274 (30%), Gaps = 12/274 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--QKINGEL 72 ++ + I + V Y + I + + I DI + L+ Q+ +G+ Sbjct: 1 MMKKILTVFILACLSCVVYAQDNVIDEIVWVVGDDAILRSDIESQRLYLQNEGQRFDGDP 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + +++ ++ L + + + N V + + G + Sbjct: 61 YCVLPEQMAIQKLFLNQAKIDSVEVSENQVIQETDRWINFAINQMGSKEKLEEYFGKKIS 120 Query: 133 HFKQYLAIQSIWPDVVKN---DFMLKYGNLEMEIPANKQKMKNIT----VREYLIRTVLF 185 K + V+ + + E+ ++ + ++ + Sbjct: 121 QLKDERKEMIMEQQTVEQMKRQLIGEIKLTPSEVRKYYSQLSKDSLPNIPTTVEVQIITM 180 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHP 244 + + + ++ + ++ G+ +L ++ L P Sbjct: 181 EPKIPFEETDAIKARLRQFTDDINSGKYEFSTLARLYSEDPESAKRGGELGFLGKTSLLP 240 Query: 245 QFQNLLKKSQN--NTTNPYVTQKGVEYIAICDKR 276 +F N+ ++ + T+ G I + +KR Sbjct: 241 EFANVAFNLKDPKKISQIVQTEYGYHIIQLIEKR 274 >gi|15896462|ref|NP_349811.1| peptidylprolyl isomerase [Clostridium acetobutylicum ATCC 824] gi|15026287|gb|AAK81151.1|AE007817_5 Parvulin-like peptidyl-prolyl isomerase, PRSA B.subtilis ortholog [Clostridium acetobutylicum ATCC 824] Length = 353 Score = 88.2 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 47/330 (14%), Positives = 104/330 (31%), Gaps = 38/330 (11%) Query: 14 KLLTTYFVLIIFCIVPIVSYK----SWAMSSRIRTTI-NGEVITDGDISKRIALLKLQKI 68 K + T ++ +F + A++S++ TI + IT G+I K Q Sbjct: 25 KQIATALLVGMFTFSAVGCSMVEKRPEAINSKVVATIYGNQTITRGEIDKLAKGTVEQLK 84 Query: 69 NG----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + ++ + LI + + ++ + IT + + Sbjct: 85 SQYGDSYEKNEEAVAALKKQKEQILTSLIDQKIFLKKAKDQKITLTKDEIKTNVDDVYAQ 144 Query: 113 TGLSAEDFSSFL---DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + S F + G FK L ++I +++ + + E Sbjct: 145 YQQEFKTESEFKSQLSQYGYTVAEFKDQLKNRAISNKLIQQ-VVKDVKVSDDEAKKYYDS 203 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 KN + + + + + + + + ++ ++ Sbjct: 204 HKNSYTQSPNTVHLAHILVKTEKEAKAVKARI--------DKGEDFATVAKQVSTDGSKE 255 Query: 230 SIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIAL 284 G + E+D + LK + N + P TQ G I K + + ++ Sbjct: 256 KGGDLGDIQENDSNYDKTFMAAALKLNDNQVSAPVHTQFGWHVIKCIKKTEYPVKDFNSV 315 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + TK + + +KK S A I Sbjct: 316 KDDIKQTVLSTKQKSVYQKTLKKWESQANI 345 >gi|158520285|ref|YP_001528155.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfococcus oleovorans Hxd3] gi|158509111|gb|ABW66078.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfococcus oleovorans Hxd3] Length = 631 Score = 88.2 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 28/255 (10%), Positives = 71/255 (27%), Gaps = 9/255 (3%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLK--KQEIEKSGITFDSNTVNYFFVQHARNTG 114 ++ A Q L ++ LI +++ E + ++ V A Sbjct: 141 NRMTAAAFEQSQKQGLLVDKLRTLITDSVLVSDNEARQWFDWENARVKITAAVFAAEGRT 200 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 ++ + +K + + V ++ + E EI Q ++ Sbjct: 201 DVDPAEAAVAAYYEEHKDQYKTPEKRKITYVRVAPARYLSEVKVTEEEIADFYQANQDFY 260 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR----LRLPKDCNKLEKFASKIHDVS 230 E + I + ++ V++ + A + +++ Sbjct: 261 WNEETVEARHILISLEQDADEARVEEARQKAADIYVMVTDGGKDFAETARQYSEGPSAGE 320 Query: 231 IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 G D+ F + + + P +Q G I + + + Sbjct: 321 GGYLGAFTREDMVAPFSEKAFSMAPGEISEPVRSQFGWHIIKVE--KVNAAFTTPLDEVR 378 Query: 290 AQNTPTKIEKHEAEY 304 A +++ EY Sbjct: 379 ADIEKQLLDQKAGEY 393 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 24/188 (12%), Positives = 52/188 (27%), Gaps = 17/188 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + S I + L+I + + T+N E++T + Sbjct: 1 MLQFMRQKASSII--IKGVLSLVILAFIFLGIGNFREQQEVTAATVNEEIVTGREFQYTY 58 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 L L++ A+ +LI E + Q+ +K G+ + + Sbjct: 59 QRLLDTYRQQFGGALNDDLLKMLNLKEQAMNQLISEKIILQQADKLGLNVSDSELAATIS 118 Query: 108 --QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 +N G + + L + + Q + D ++ + E Sbjct: 119 SIPAFQNNGRFDKTRYNRLLQSNRMTAAAFEQSQKQGLLVDKLRTLITDSVLVSDNEARQ 178 Query: 166 NKQKMKNI 173 Sbjct: 179 WFDWENAR 186 >gi|227499517|ref|ZP_03929624.1| possible peptidylprolyl isomerase PrsA [Anaerococcus tetradius ATCC 35098] gi|227218396|gb|EEI83647.1| possible peptidylprolyl isomerase PrsA [Anaerococcus tetradius ATCC 35098] Length = 360 Score = 88.2 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 90/278 (32%), Gaps = 23/278 (8%) Query: 40 SRIRTTINGEVITDGDISKRIALL-KLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98 + ++G+ I+ D ++ + +L+ V ++ + L +I+K+ I D Sbjct: 46 DKTVAIVDGQKISKDDYKSEMSFYASMLASQQQLKNSIVTMMVQDKLIANDIKKNNIKID 105 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 V+ +Q +N G + + D + + + F Sbjct: 106 DKDVDNALMQSVQNFGGQEQFDKTLDDYNMDIKKFKETLKKD--LMYKKHREWFDENNKV 163 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + EI ++ K+ + ++ ++ K+ + Sbjct: 164 SDDEIKKYFEENKDQFTKVDASHILV------------DDEETAKEIKAKLDNGEDFAKL 211 Query: 219 LEKFASK-IHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++++ + G+ + + +F+ + +NP +Q G I I Sbjct: 212 AKEYSKDTASAKNGGELGSFGKGQMVKEFEEAAFSMKEGEISNPVKSQFGYHIIKINSI- 270 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K ++ + K A+Y+KKL A + Sbjct: 271 -SDSYEKSKEEITKKIKDKK----YADYIKKLHDEAHV 303 >gi|196044409|ref|ZP_03111645.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus 03BB108] gi|196025048|gb|EDX63719.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus 03BB108] Length = 285 Score = 88.2 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 79/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + +++ SS T IT D K++ K Sbjct: 4 KHIFIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E+I + + ++ + S + + + F + Sbjct: 56 LYEMIAQDVITKKYKVSDDDVEKEVQ-----------KVRNQYGDQFTAVLENNRLKDEA 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + E++ + Sbjct: 105 DFKKQIKFKLAMNEAIKKSVTEKEVKA--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLKV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK++L +K + +I + ++K A Sbjct: 205 GQISNPVKSPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERIADPTFSHKLLQKELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|318604634|emb|CBY26132.1| peptidyl-prolyl cis-trans isomerase ppiD [Yersinia enterocolitica subsp. palearctica Y11] Length = 628 Score = 88.2 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 37/399 (9%), Positives = 107/399 (26%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + +++ F + + SY + +NG+ I+ + + + Sbjct: 1 MMDNLRAAANNVVLKIILALIMLSFILTGVGSYLIGGSNDF-AAKVNGQEISRAQLEQAV 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +L + + +L+ L Q +K G+T V Sbjct: 60 QSERSRLQQQLGEQFSALAANEGYMLQLRQQVLGQLVNNMLLDQYAKKLGLTASDEQVKD 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ----------------------- 141 Q D + +L+ Q+ +Q Sbjct: 120 AIRQAPYFQTDGKFDNNKYLELVNRMGYTPDQFAQLQRQQLINQQLLQAFGDTGFVLPVE 179 Query: 142 -------SIWPDVVK------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + V+ + + E+ A + KN + ++ ++ Sbjct: 180 AQAMSALILQQREVRLATLDLKALQAQQKVTDEELQAYYDQNKNSFIAPEQMKISFIAMD 239 Query: 189 DNKLQNQG-------------------------------FVQKRIKDAEESRLRLPKDCN 217 +Q++ + K A + + Sbjct: 240 AAAMQDKITVTEEDIAAYYDQHKSTYTKPEQRNYSVIQFKTEAEAKTALDELKKGADFAA 299 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ I + G+ +L + + + ++ + G + + + Sbjct: 300 IAKEKSTDIISRKNGGELGWLEPETTADELKQANLTEKGQLSDVVKSSVGYLIVRLNGIK 359 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + L+ Q K +K+ A Sbjct: 360 PAQVKPLSEVHDALAKQVKQEKAVDAYYALQQKVSEAAT 398 >gi|238759258|ref|ZP_04620425.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia aldovae ATCC 35236] gi|238702545|gb|EEP95095.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia aldovae ATCC 35236] Length = 628 Score = 88.2 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 37/399 (9%), Positives = 111/399 (27%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + +++ F + + SY + +NG+ I+ + + + Sbjct: 1 MMDNLRAAANNVVLKIILALIMLSFILTGVGSYLIGGSNDY-AAKVNGQDISRAQLEQAM 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +L + + +L+ L Q +K G++ V Sbjct: 60 QSERGRLQQQLGEQFSALAANEGYMLQLRQQVLGQLVNNMLLDQYAQKLGLSASDAQVKE 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ----------------------- 141 Q + D + +L+ +Q+ +Q Sbjct: 120 AIRQAPYFQTDNKFDNNKYLELVNRMGYTPEQFAQLQRQQLINQQLLQAFGDTGFVLPIE 179 Query: 142 -------SIWPDVVK------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + V+ + + E+ A ++ KN + ++ ++ Sbjct: 180 AQAMSELILQQRDVRLATIDLKALQAQQKVTDEELKAYYEQNKNSFIAPEQMKVSFIAMD 239 Query: 189 DNKLQNQG-------------------------------FVQKRIKDAEESRLRLPKDCN 217 +Q++ + K A + + Sbjct: 240 AAAMQDKITVTEEDIAAYYEQHKSSYTQPERRNYSVIQFKTEAEAKAALDELKKGADFAA 299 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ I + G+ +L + + + ++ + G + + D + Sbjct: 300 MAKEKSTDIISRKNGGELGWLEPETTADELKQANLTEKGQLSDVVKSSVGYLIVRLNDIK 359 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + L+ Q K +K+ A Sbjct: 360 PELVKPLSEVHEALAKQVKQEKAVDAYYALQQKVSEAAT 398 >gi|229095750|ref|ZP_04226729.1| Foldase protein prsA 2 [Bacillus cereus Rock3-29] gi|229101848|ref|ZP_04232562.1| Foldase protein prsA 2 [Bacillus cereus Rock3-28] gi|229114700|ref|ZP_04244114.1| Foldase protein prsA 2 [Bacillus cereus Rock1-3] gi|228668765|gb|EEL24193.1| Foldase protein prsA 2 [Bacillus cereus Rock1-3] gi|228681431|gb|EEL35594.1| Foldase protein prsA 2 [Bacillus cereus Rock3-28] gi|228687583|gb|EEL41482.1| Foldase protein prsA 2 [Bacillus cereus Rock3-29] Length = 285 Score = 88.2 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 76/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT D K++ K Sbjct: 4 KHIFIITALISILMLSACGQKNGSATVATATDSTITKSDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + ++ + S D+ + G + Sbjct: 56 LYEMMAYDVITKKYKVSDDDVDNEVQKVKNQFGDQFKGFLENNRLKDEADF--------- 106 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 107 --KNQMKFKLALHEAVKKSVTEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENAAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFNSGTMAPEFETAAYKLKV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+DL +K + +I + ++ A Sbjct: 205 GEISNPVKSTNGYHIIKLTDKKDLKPYDEVKDSIRKNLEEERIADPTFSQKLLQDELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|330859944|emb|CBX70273.1| peptidyl-prolyl cis-trans isomerase D [Yersinia enterocolitica W22703] Length = 628 Score = 88.2 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 37/399 (9%), Positives = 107/399 (26%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + +++ F + + SY + +NG+ I+ + + + Sbjct: 1 MMDNLRAAANNVVLKIILALIMLSFILTGVGSYLIGGSNDF-AAKVNGQEISRAQLEQAV 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +L + + +L+ L Q +K G+T V Sbjct: 60 QSERSRLQQQLGEQFSALAANEGYMLQLRQQVLGQLVNNMLLDQYAKKLGLTASDEQVKD 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ----------------------- 141 Q D + +L+ Q+ +Q Sbjct: 120 AIRQAPYFQTDGKFDNNKYLELVNRMGYTPDQFAQLQRQQLINQQLLQAFGDTGFVLPVE 179 Query: 142 -------SIWPDVVK------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + V+ + + E+ A + KN + ++ ++ Sbjct: 180 AQAMSALILQQREVRLATLDLKALQAQQKVTDEELQAYYDQNKNSFIAPEQMKISFIAMD 239 Query: 189 DNKLQNQG-------------------------------FVQKRIKDAEESRLRLPKDCN 217 +Q++ + K A + + Sbjct: 240 AAAMQDKITVTEEDIAAYYDQHKSTYTKPEQRNYSVIQFKTEAEAKTALDELKKGADFAA 299 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ I + G+ +L + + + ++ + G + + + Sbjct: 300 IAKEKSTDIISRKNGGELGWLEPETTADELKQANLTEKGQLSDVVKSSVGYLIVRLNGIK 359 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + L+ Q K +K+ A Sbjct: 360 PAQVKPLSEVHDALAKQVKQEKAVDAYYALQQKVSEAAT 398 >gi|332160753|ref|YP_004297330.1| peptidyl-prolyl cis-trans isomerase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664983|gb|ADZ41627.1| peptidyl-prolyl cis-trans isomerase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 628 Score = 88.2 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 37/399 (9%), Positives = 107/399 (26%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + +++ F + + SY + +NG+ I+ + + + Sbjct: 1 MMDNLRAAANNVVLKIILALIMLSFILTGVGSYLIGGSNDF-AAKVNGQEISRAQLEQAV 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +L + + +L+ L Q +K G+T V Sbjct: 60 QSERSRLQQQLGEQFSALAANEGYMLQLRQQVLGQLVNNMLLDQYAKKLGLTASDEQVKD 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ----------------------- 141 Q D + +L+ Q+ +Q Sbjct: 120 AIRQAPYFQTDGKFDNNKYLELVNRMGYTPDQFAQLQRQQLINQQLLQAFGDTGFVLPVE 179 Query: 142 -------SIWPDVVK------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + V+ + + E+ A + KN + ++ ++ Sbjct: 180 AQAMSALILQQREVRLATLDLKALQAQQKVTDEELQAYYDQNKNSFIAPEQMKISFIAMD 239 Query: 189 DNKLQNQG-------------------------------FVQKRIKDAEESRLRLPKDCN 217 +Q++ + K A + + Sbjct: 240 AAAMQDKITVTEEDIAAYYDQHKSTYTKPEQRNYSVIQFKTEAEAKTALDELKKGADFAA 299 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ I + G+ +L + + + ++ + G + + + Sbjct: 300 IAKEKSTDIISRKNGGELGWLEPETTADELKQANLTEKGQLSDVVKSSVGYLIVRLNGIK 359 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + L+ Q K +K+ A Sbjct: 360 PAQVKPLSEVHDALAKQVKQEKAVDAYYALQQKVSEAAT 398 >gi|312134560|ref|YP_004001898.1| ppic-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor owensensis OL] gi|311774611|gb|ADQ04098.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor owensensis OL] Length = 335 Score = 88.2 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 36/318 (11%), Positives = 93/318 (29%), Gaps = 20/318 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL--- 62 + VL+I I + +R +NGE IT + + Sbjct: 1 MDKRIKIMLFSIVSIVLLIIVIAVTPEIVKYMDENRAVAIVNGEKITKKEFAINYKSQIN 60 Query: 63 ------------LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 + + ++++ + LI+ ++ Q+ K IT S Q Sbjct: 61 YYGLDKAFLSQKVGDKTYEQQIKEDILDSLILRQIELQQARKRNITLTSAEKKAIDQQIE 120 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + S + + Q I ++ + + + + Sbjct: 121 QYKSDSQSGAEF--KQYLQTIGATENDFKDQVIKSQIISKLYDEVTKSQKASDAEIESYY 178 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDV 229 + ++ N + + +K+ ++ + +K++ Sbjct: 179 NSHKSDFVEVKASHILFKVNDSKEETAKKKKAEEVLQMIKSGQSFEKLAQKYSEDETTKQ 238 Query: 230 SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 G Y + + +F++ + +N T G I + DK+ L +K + Sbjct: 239 KGGDLGYFRKGQMVKEFEDAAFSLNIGEVSNVVKTSYGFHIIKVADKKQLSLN-DVKDEI 297 Query: 289 SAQNTPTKIEKHEAEYVK 306 + K +++ ++ Sbjct: 298 KSTVESQKKDEYYKSLIE 315 >gi|307729669|ref|YP_003906893.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1003] gi|307584204|gb|ADN57602.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1003] Length = 259 Score = 88.2 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 82/278 (29%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I I L + Q+ + +L+ +EL+ + QE + G Sbjct: 25 IAVVNGTPIPKARADALIEQLVHQGQQNSSQLQMAVREELVNREVLMQEALRRG------ 78 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 Q D + +A Q++ + DF+ K + Sbjct: 79 -------------------------LQNRPDIKAQIAVAQQTVVLRALIEDFVKKNTPSD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A + + + +++ KD + Sbjct: 114 AEVTARYNALIKDAGGKEYHLHHILVDN----------EQQAKDLIAKIKGGASFEELAK 163 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT-NPYVTQKGVEYIAICDKRD 277 +F+ + G + P+F N + + P TQ G I + D R+ Sbjct: 164 QFSKDPGSGKNGGDLDWSDPKAYVPEFANAATHLQKGQMSDEPVHTQFGWHIIRVDDVRN 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + AQ ++ + + LR NA I Sbjct: 224 ITP--PPLEQVRAQIVQQIQQEKLQAFEEGLRKNAKIQ 259 >gi|119952910|ref|YP_945119.1| basic membrane protein [Borrelia turicatae 91E135] gi|119861681|gb|AAX17449.1| basic membrane protein [Borrelia turicatae 91E135] Length = 344 Score = 88.2 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 103/341 (30%), Gaps = 37/341 (10%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKL 65 + + + ++F +V I S+ + IN E+IT + ++ LK Sbjct: 2 IDIKVIFMGNVLCFLLFFVVGITSFAQ----NTPVVIINLHSNEIITKTEFDSKVNTLKK 57 Query: 66 QKI---NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 + + K +Q LI + L QE K GI + V L+ E Sbjct: 58 TQGRDLSNAERKQVLQILIADVLFGQEALKQGIKVEDAEVMQTIRTQFGLLNLTDEQIKQ 117 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPANKQKMKNITVREY 178 ++ QG N + ++ + F E E+ + K V Sbjct: 118 MVESQGTNWNELLSSMKRSLSAQKLILKMAQPKFSEIKIPGEKEVVEYYEANKTKFVNPD 177 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 + R + + + + + + K+++ V G +L Sbjct: 178 IARISHVFFSSKDKKRSEVLANAKDIVNQIKSKKITFEEAVRKYSNDEGSKVKNGDLGFL 237 Query: 238 LESDLH-------PQFQNLLKKSQNNTTNPYVTQKGVEYIAIC-----------DKRDLG 279 D + + + + + + P +++G + + DK Sbjct: 238 ARGDQNAQNVLGLDFVKEVFMLKKGDISQPISSKEGFHIVKVTEMYSQRFLGLQDKISPN 297 Query: 280 GEIALKAYLSAQNTPTKIEKHE----AEYVKKLRSNAIIHY 316 ++ +K + ++ E KL +A I Sbjct: 298 VDMTVKDAIKNNMVNIHQQQIVARVQQEIYDKLNKSASIQI 338 >gi|332981378|ref|YP_004462819.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mahella australiensis 50-1 BON] gi|332699056|gb|AEE95997.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mahella australiensis 50-1 BON] Length = 350 Score = 88.2 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 44/345 (12%), Positives = 100/345 (28%), Gaps = 36/345 (10%) Query: 9 LSDFIKLLTTYFV-LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK 67 + F+++ V + IF +V+ +NG+ I D K+ Sbjct: 1 MKRFVRMTALAMVAIFIFAGCSLVTVDPEKEKQLPVAEVNGDKILKADYVKQYDAYINAV 60 Query: 68 ING-------------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 ++ + V+ LI + L Q+ +K+ I + Q Sbjct: 61 EQQYGIDKKTLETSTDYADTLAQMREDIVEGLITQKLVDQQAKKNNIALTDDDKKQVKDQ 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + E+ + + KQ + L + + + E+ Sbjct: 121 LQQLKDAYGEEAFADMLKQQQMTEAELEQLLQGDAVQQKLFDQLTAGITVTDEEVKKYYD 180 Query: 169 KMKNIT---VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE--------SRLRLPKDCN 217 + K+ + +L SIP++K +K D + Sbjct: 181 ENKDTEFTDPEMVKVSHILISIPEDKYSADETTKKTEYDKIKPEAEQVLAKAKAGDDFAE 240 Query: 218 KLEKFASKI-HDVSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICD 274 +++++ G + E + P F + K++ + + T G I + + Sbjct: 241 LVKQYSDDAGTKDQGGTLTFSREDQIEPAFIEASFALKNKGDISGLVQTSYGYHIIRLEE 300 Query: 275 KRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 K K + K +++ + + I Y Sbjct: 301 KIPSKVHTFEEKKQEIHDTLLQQKKNDKITALIEEWKKGSDIKKY 345 >gi|158321661|ref|YP_001514168.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkaliphilus oremlandii OhILAs] gi|158141860|gb|ABW20172.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkaliphilus oremlandii OhILAs] Length = 317 Score = 88.2 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 32/324 (9%), Positives = 95/324 (29%), Gaps = 38/324 (11%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--- 70 K LT + ++ + I ++ + I + +T+ + +K + Sbjct: 3 KKLTILIIAMLTMAILITGCSKTGLAEGVVAKIGNKEVTEAEYNKLLDYYLSIATTQYNL 62 Query: 71 -----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 L+ + +++ + + ++ +T V F ++ Sbjct: 63 TEEILNTDNGSGMTLLDTLKAEVLDIIVLTEIIADKAAENKVTVTEEEVTKEFEENHVKV 122 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 S E++ +++ + D K+ + I + N ++ + Sbjct: 123 MESDENYKKLIEENKLDDAFIKEQIRKDLIAYKYNQFYLEKTEINEAAAKTFYEENPEGF 182 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IG 232 + + +L ++ K+ ++++++ G Sbjct: 183 HNEQVSAKHIL-----------VETEETAKEVIGKLEAGADFAELAKEYSTEPGAEQTGG 231 Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK-RDLGGEIALKAYLSA 290 Y + + P+F+ + P T G I + DK + KA + Sbjct: 232 NLGYFKKGRMVPEFEKAAFALEVGKISEPVKTDFGYHVIVVEDKVDESISFEDAKADIVD 291 Query: 291 QNTPTKIEKHEAEYVKKLRSNAII 314 +++++ A + Sbjct: 292 YLKR----LDYQKHLEEALKKANV 311 >gi|289809575|ref|ZP_06540204.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 250 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 76/244 (31%), Gaps = 15/244 (6%) Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 E S D+ V+ ARN + ++ Q + IQ + Sbjct: 5 LPENPTSEQVNDAQRQAESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGI 64 Query: 147 VVKND-----------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + G +++ + + ++I+V E R +L +Q Sbjct: 65 FAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMN-DQ 123 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 K + A + + ++++ G + P F++ L K Sbjct: 124 QARLKLEEIAADIKSGKTTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLH 183 Query: 255 -NNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + P + G I + D R + + A K K + A ++++ R++A Sbjct: 184 KGQISAPVHSSFGWHLIELLDTRKVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASA 243 Query: 313 IIHY 316 + Sbjct: 244 YVKI 247 Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 12/137 (8%), Positives = 41/137 (29%), Gaps = 7/137 (5%) Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 + + + Q++ + E +++ + G+ + +L Sbjct: 3 IALPENPTSEQVNDAQRQAESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELP 62 Query: 244 PQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIE 298 F + + P + G + + D R + ++ + +P + Sbjct: 63 GIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMND 122 Query: 299 KHEAEYVKKLRSNAIIH 315 + ++++ A I Sbjct: 123 QQARLKLEEI--AADIK 137 >gi|88860449|ref|ZP_01135087.1| peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D) [Pseudoalteromonas tunicata D2] gi|88817647|gb|EAR27464.1| peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D) [Pseudoalteromonas tunicata D2] Length = 633 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 40/408 (9%), Positives = 100/408 (24%), Gaps = 96/408 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + V++ F + I SY + + +NG+ I+ ++ Sbjct: 1 MLEKIREGSQGLTAKIILGLVILSFALAGIGSYLG-QTTEKPVAVVNGQKISQTTFARAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELI-----------------VETLKK 87 + + + + + L+ E +K+ Sbjct: 60 ENERSRLEQQFGEYFNQIASDPTYMARVREGVIDRLVQQELQTQLANELGLRISDEAIKE 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD-------------------KQG 128 + N ++Q R + F ++L Sbjct: 120 EIRTLPYFNIGGQFSNDRYLQVIRQMNFQPDTFRNYLRTEMTRSQLVTAVAASDFALPNE 179 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT-------------- 174 + Q + + + E EI ++ Sbjct: 180 MVTISQLQTQVRDLDYVLLTADQVSKDITVTEQEISDYYTLNQSQFLSQEQVSVEYVELN 239 Query: 175 ------------------------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 R + I + ++ + + +D Sbjct: 240 AETLPVVKAVTDDEILALYNDNKAQYVEPERRRVAHILVDLGDDEAASEAKAQDLLAKLK 299 Query: 211 RLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK--SQNNTTNPYVTQKGV 267 + +S I + G ++ + P F+ ++ + ++ ++ G Sbjct: 300 AGADFAQLAQSDSSDIVSAENGGDLDWIDRDMMDPAFEEAAFSLAAKGDISDVVKSEFGF 359 Query: 268 EYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 I + D + +K L+A+ +H E +L A Sbjct: 360 HIIKLTDLQAEQIKTLDMVKDELTARLEQDHKTEHFYELQTRLAELAF 407 >gi|261856056|ref|YP_003263339.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halothiobacillus neapolitanus c2] gi|261836525|gb|ACX96292.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halothiobacillus neapolitanus c2] Length = 325 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 81/286 (28%), Gaps = 47/286 (16%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 + S +I TING+ + + ++ L K E+ +Q +I L + Sbjct: 57 SAKVTSGKIIATINGQP--LYEENLKVIQSSLPKSKNIPEQDLIQRMIELRLLASAARQE 114 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 G LDKQ + + Q + Sbjct: 115 G-----------------------------LDKQIKTKAQIQNAVDNQLANDYLSDYLSK 145 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 +K + E++ N+ +Y +L + + Sbjct: 146 MKVTDAELQPEYNQFVKGYPKTTQYKAAHILVKTKEEADA-----------IIKQLDSGT 194 Query: 214 KDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYI 270 ++ + G+ + + P+F + K + T P +Q G I Sbjct: 195 PFDQLAKEKSQDPGSAKQGGELGWFDADQMVPEFSAAVEKLKKGEITQQPVKSQFGWHVI 254 Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R A L Q + +KKLR+ A I+ Sbjct: 255 KLEDTRLAQP--PTFAELKPQLETQYRRAAIEDLIKKLRTKAKINI 298 >gi|313646932|gb|EFS11389.1| PPIC-type PPIASE domain protein [Shigella flexneri 2a str. 2457T] gi|332763740|gb|EGJ93978.1| PPIC-type PPIASE domain protein [Shigella flexneri K-671] Length = 622 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 38/395 (9%), Positives = 102/395 (25%), Gaps = 85/395 (21%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAFN 59 Query: 62 LLKLQKING----------------ELEKIAVQELIVETLKKQEIEK------------- 92 + + L + + LI E L Q + Sbjct: 60 SERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQA 119 Query: 93 ----SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN--------HFKQYLAI 140 D N + G++A+ ++ L Q F Sbjct: 120 IFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGET 179 Query: 141 QSIWPDVVKNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + V + + + E EI + ++ KN + R + Sbjct: 180 DELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLVA 239 Query: 190 NKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKLE 220 +Q ++ + + Sbjct: 240 ATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALAK 299 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + ++ I + G +L ++ + + +N K + + + G + + D + Sbjct: 300 EKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPAK 359 Query: 280 GE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 VKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 394 >gi|189463692|ref|ZP_03012477.1| hypothetical protein BACINT_00023 [Bacteroides intestinalis DSM 17393] gi|189438642|gb|EDV07627.1| hypothetical protein BACINT_00023 [Bacteroides intestinalis DSM 17393] Length = 454 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 32/279 (11%), Positives = 91/279 (32%), Gaps = 12/279 (4%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQ 66 + +F+ + + + Y + + + E I ++ + A + + Sbjct: 1 MKNFMN-FKFVVLCALALMTGSAVYGQDNVIDEVVWVVGDEAILKSEVEEARMSAAYEGR 59 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSF 123 K +G+ + +E+ V+ L + I + V + S E + Sbjct: 60 KFDGDPYCVIPEEIAVQKLFLHQAALDSIEVPESEVIQRVDYMTNMYIANIGSREKMEEY 119 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR-- 181 +K + A + + ++ + + E+ + + ++ + Sbjct: 120 FNKTSSQIRETLRENAREGLKVQKMQQKLVGEIKITPAEVRRYFKDLPQDSIPYIPTQVE 179 Query: 182 -TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLE 239 ++ P L+ V++R+++ E + ++ ++ G+ + Sbjct: 180 VQIITQQPKIPLEEIEDVKRRLREYTERVNKGESFSMLARLYSDDRGTAINGGEMPFTGR 239 Query: 240 SDLHPQFQN--LLKKSQNNTTNPYVTQKGVEYIAICDKR 276 L P F N + N + ++ G I + +KR Sbjct: 240 GYLDPAFANVAFNLQDPNKVSKIVESEYGFHIIQLMEKR 278 >gi|118476746|ref|YP_893897.1| peptidylprolyl isomerase [Bacillus thuringiensis str. Al Hakam] gi|225863116|ref|YP_002748494.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus 03BB102] gi|229090207|ref|ZP_04221455.1| Foldase protein prsA 2 [Bacillus cereus Rock3-42] gi|229183467|ref|ZP_04310692.1| Foldase protein prsA 2 [Bacillus cereus BGSC 6E1] gi|118415971|gb|ABK84390.1| protein export protein [Bacillus thuringiensis str. Al Hakam] gi|225789473|gb|ACO29690.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus 03BB102] gi|228600051|gb|EEK57646.1| Foldase protein prsA 2 [Bacillus cereus BGSC 6E1] gi|228693143|gb|EEL46856.1| Foldase protein prsA 2 [Bacillus cereus Rock3-42] Length = 285 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 79/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + +++ SS T IT D K++ K Sbjct: 4 KHIFIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E+I + + ++ + S + + + F + Sbjct: 56 LYEMIAQDVITKKYKVSDDDVEKEVQ-----------KVKNQYGDQFTAVLENNRLKDEA 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + E++ + Sbjct: 105 DFKKQIKFKLAMNEAIKKSVTEKEVKA--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLKV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK++L +K + +I + ++K A Sbjct: 205 GQISNPVKSPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERIADPTFSHKLLQKELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|150397715|ref|YP_001328182.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sinorhizobium medicae WSM419] gi|150029230|gb|ABR61347.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sinorhizobium medicae WSM419] Length = 284 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 32/290 (11%), Positives = 73/290 (25%), Gaps = 48/290 (16%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETLKKQ 88 + + + + I ++ + L Q + + A+ +I L + Sbjct: 19 GVARAEGTDPVIAKVGDQEIRQSELDLAVTSLDPQLQRMPDEQKRAAALSAVIDVKLLLK 78 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 + EK G+ + +L + + Sbjct: 79 DAEKEGL------------------------------QNDETFKQRIAFLTERELHNAYF 108 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 K + E++ +K+ E R +L D + Sbjct: 109 KKHVIDAVTPEEVKARYDKEIAAIPPQEEVKARHILVKTEDEAKAVIKELDA-------- 160 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKG 266 + ++ + G Y + + P+F+ + T P TQ G Sbjct: 161 ---GKNFAELAKAKSTDPNKDEGGDLGYFTKGRMVPEFETAAFALEKGAYTKTPVKTQFG 217 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + DKR + Q + E + + + + Sbjct: 218 FHVILVEDKRPQAP--PTLEQVEPQVRQLVMRDRYLELLNSAKESTAVEI 265 >gi|71278179|ref|YP_270447.1| peptidyl-prolyl cis-trans isomerase D [Colwellia psychrerythraea 34H] gi|71143919|gb|AAZ24392.1| peptidyl-prolyl cis-trans isomerase D [Colwellia psychrerythraea 34H] Length = 638 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 32/407 (7%), Positives = 87/407 (21%), Gaps = 101/407 (24%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +++ F + + SY + T+NGE I+ +K Sbjct: 1 MLEDIREKSQGLTAKIILGLIILTFAVAGVGSYTN--SVDTSVATVNGEPISQQAFNKAY 58 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + LI E L Q E I + Sbjct: 59 QAQRGRMAQQFGEMFDTLSNDANYMANFRQGVLDNLINEKLIDQNSEALAIRVSDLRLKE 118 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN-------------- 150 + D + +L + Sbjct: 119 TIRKMPEFQVDGTFDNNRYLAIINQAGFFQSSDFRDYLRVEMTRRQLSQALIATEFNLPY 178 Query: 151 -----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRT----- 182 F + E+ + + + ++ Sbjct: 179 QEKLQLALQNQTRDIRFATISAEQFKATVELTDEEVNSYYLANQARFQNKEQVKVDYISL 238 Query: 183 --------------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF------ 222 + + +R ++ K Sbjct: 239 NVANIAKGINVTDEEVAKYYQENSASFTESAQRRISHILIEFNDGNADDEAAKIQAQAVL 298 Query: 223 -----------------ASKIHDVSIGKAQYLLESDLHPQFQNL--LKKSQNNTTNPYVT 263 + G ++L + F + +T+ T Sbjct: 299 ARLEQGEDFAVLAKEVSNDTFSGENGGDLEWLEPGVMEETFDEAALALVNVGDTSQLVKT 358 Query: 264 QKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKL 308 G + + D ++ + I ++ L ++ + + ++ +++ Sbjct: 359 SFGYHVLKLTDYKEEVVKALIDVQTELRSKLSNDQAQEKFFTLQQEM 405 >gi|255011717|ref|ZP_05283843.1| putative exported peptidyl-prolyl cis-trans isomerase [Bacteroides fragilis 3_1_12] gi|313149552|ref|ZP_07811745.1| peptidyl-prolyl cis-trans isomerase [Bacteroides fragilis 3_1_12] gi|313138319|gb|EFR55679.1| peptidyl-prolyl cis-trans isomerase [Bacteroides fragilis 3_1_12] Length = 456 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 37/318 (11%), Positives = 97/318 (30%), Gaps = 17/318 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQ 66 + F+ + + + + SY + + + E I D+ + AL + + Sbjct: 1 MKKFVN-FKFVVMFALALVANVASYAQDNVIDEVVWVVGDEAILKSDVEEARLAALYEGR 59 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 K +G+ + +EL V+ L + I + V N + + Sbjct: 60 KFDGDPYCVIPEELAVQKLYMHQAVLDSIEVPESEVIQRVDYQINNYIQALGSRERMEAE 119 Query: 127 QGIGDNHFKQYLAIQSIWP---DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 ++ L + ++ + E+ + + ++ + Sbjct: 120 FNKTSTQIREALRENARDGAIVQRMQQKLVGDIKVTPAEVRRYFKDLPQDSIPYVPTQVE 179 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLL 238 + I ++ + E R+ K + A + + G+ ++ Sbjct: 180 VQIITQQPKVPISEIEDVKRRLREYTDRINKGESDFSTLALLYSEDRGSAIKGGETGFMG 239 Query: 239 ESDLHPQFQNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIA---LKAYLSAQNT 293 + + P++ N+ Q+ + ++ G I + +KR LK +S + Sbjct: 240 KGQMVPEYANVAFNLQDTKKISKIVESEYGFHIIQLIEKRGDRINTRHILLKPKVSDKEL 299 Query: 294 PTKIEKHEAEYVKKLRSN 311 +RS+ Sbjct: 300 NE-ANARLDSIANDIRSD 316 >gi|212636023|ref|YP_002312548.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella piezotolerans WP3] gi|212557507|gb|ACJ29961.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella piezotolerans WP3] Length = 619 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 47/400 (11%), Positives = 99/400 (24%), Gaps = 93/400 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ I V++ F + SY + T+NGE I++ + + Sbjct: 1 MLEKIREGSQGVIAKSILVLVILSFAFTGVSSYLGSSTEVA-AATVNGEEISNSALEQAY 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +++ ++ L+ E L Q + G+ + Sbjct: 60 ENERGRLEQQLGDMFSTLSADDNYMQSVKQSVLERLVAEKLLDQNAAELGLRVSDEQIRT 119 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK------ 155 +Q + + + + L + G N F+ + + +V + Sbjct: 120 AIMQEPAFQTDGRFDNDRYQAILRQLGYQANSFRDMMRVDMTRRQLVATLVGSEFVLPGE 179 Query: 156 ---------------------------YGNLEMEIPANKQKMKNITVREYLIRTVLFS-- 186 + +I VR ++ Sbjct: 180 AEYLANIQGQTRDINYLVIDSTPFLAAASVTDEQIQTYYNSNLGQFVRPEIVSLNYIELD 239 Query: 187 -----------------IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--- 226 D +KR+ L K E K+ Sbjct: 240 AKQLAADVTVTEADAKTYYDENKVQYLQPEKRLAAHILIGLDEDNAEEKAEAIYQKLQNG 299 Query: 227 ---------------HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYI 270 G+ + + P+F L + + +N T G I Sbjct: 300 EDFAALAKAESQDTFSGEQGGQLDWFEAGVMEPEFDAALFALDKGSYSNVVKTNFGYHII 359 Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 D G A A + + E+ + +L+ Sbjct: 360 KALDI--QAGAEAPFADVKEKIIAQLQEQQAVDKFYELQQ 397 >gi|15604429|ref|NP_220947.1| protein export protein PRSA precursor (prsA) [Rickettsia prowazekii str. Madrid E] gi|20138858|sp|Q9ZCX6|PLP_RICPR RecName: Full=Parvulin-like PPIase; AltName: Full=29.5 kDa outer membrane antigen; AltName: Full=Peptidyl-prolyl cis-trans isomerase plp; AltName: Full=Rotamase plp; Flags: Precursor gi|3861123|emb|CAA15023.1| PROTEIN EXPORT PROTEIN PRSA PRECURSOR (prsA) [Rickettsia prowazekii] gi|4581486|emb|CAA61657.1| parvulin, PPIase-like protein [Rickettsia prowazekii] gi|10303401|emb|CAC10161.1| parvulin-like PPIase [Rickettsia prowazekii] gi|292572198|gb|ADE30113.1| Parvulin-like peptidyl-prolylisomerase [Rickettsia prowazekii Rp22] Length = 282 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 81/301 (26%), Gaps = 38/301 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + +IF V ++S ++ ++ T G + + I + + ++ Sbjct: 4 LSVIFLSVSMLSSIAFGDEDKVVATYKGGEVKESQIMQEFKPQLNLQSGETIKN------ 57 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 ++ N L E+ + + Sbjct: 58 --------------FDDFPLQDQEKLIKIYVNNLLLKEEVAKSSITSSKEFQEKLENAKN 103 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +++ N + + NK + + +L QK Sbjct: 104 QLAQQELLANYIKSNITDKMFDDEYNKYVDNLKGKEQIKVAHIL-----------VKSQK 152 Query: 201 RIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL---LESDLHPQFQNLLKK-SQN 255 + + E+F+ K + G Y+ L P+F+ N Sbjct: 153 EANTVKTKLSKGGNFTKLAEEFSLDKATASNGGIIGYIILNQPGQLVPEFEQKAFALKVN 212 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + +K+ + I K + +Y+ L + A + Sbjct: 213 EVSTPVKTSFGWHIIKVLEKKPVP--IPTKEEAKVTIDNILAAEILKQYISDLEAKADLK 270 Query: 316 Y 316 Sbjct: 271 I 271 >gi|34540238|ref|NP_904717.1| PPIC-type peptidyl-prolyl cis-trans isomerase [Porphyromonas gingivalis W83] gi|34396550|gb|AAQ65616.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Porphyromonas gingivalis W83] Length = 460 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 27/305 (8%), Positives = 85/305 (27%), Gaps = 17/305 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELE 73 + +++ + S + + + E I DI L G + Sbjct: 6 MRICIIMLSLLYWALPSMGQKNVIDEVVWMVGDEPILRSDIEATKRFLLSSGRPLEGNAD 65 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +++ V+ L + + I + VN + + + + Sbjct: 66 CYIPEQIAVQKLFLNQAKIDSIEVNEADVNRYVDMYLADYIQQFGSKEKMEEYFNRKYTQ 125 Query: 134 FKQYLAIQSIWP---DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF----S 186 ++ ++ +++ EI + ++ + Sbjct: 126 IREEQRVEVRNSEIVRMMRKKIDENVKVTPSEIRQYFASLPQDSLPYIPTTVEVQLLAIK 185 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQ 245 + + ++ + ++E ++ + G+ ++ ++ L + Sbjct: 186 PVISLHETDAIKKRLREFSDEINEGRRDFTTLARLYSEDSKTALQGGEYGFVSKASLDAE 245 Query: 246 FQNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 F ++ + + T G + + +KR G++ + P + E Sbjct: 246 FARVVFSLTDTKRVSPIIKTDDGYHIVQLIEKR---GDVINFRQIV--LKPKVSDAALTE 300 Query: 304 YVKKL 308 KL Sbjct: 301 TTNKL 305 >gi|209694402|ref|YP_002262330.1| peptidyl-prolyl cis-trans isomerase D [Aliivibrio salmonicida LFI1238] gi|208008353|emb|CAQ78508.1| peptidyl-prolyl cis-trans isomerase D [Aliivibrio salmonicida LFI1238] Length = 618 Score = 87.4 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 34/402 (8%), Positives = 91/402 (22%), Gaps = 90/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ + + + ++ F + SY S + + IT D + Sbjct: 1 MMDRIREGSTGLVVKIILGLIIFSFVFAGVGSYL-VGGSQPLAAKVGEREITRNDFEQVY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELI-----------------VETLKK 87 + + + + K + ++ E +++ Sbjct: 60 QNERNRMQSQLGEYFSTLLGDPAYVEQFRKSVLDRMVNDALLDNQAQELGLRVSDEQIRQ 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD-------------------KQG 128 + D F R G +++ F+ +L Sbjct: 120 AILSMPQFQKDGKFDEEIFNVSLRRAGFTSDSFAEYLRGDLVRNQLVSALESTEFTLSNE 179 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT------ 182 + + + + F E E+ K VR ++ Sbjct: 180 VKAQGELEGQQREIRTITLDTATFAKNAKVTEEEVKEYYDANKQQFVRPEQVKVSYIELS 239 Query: 183 -------------VLFSIPDNKLQNQGFVQKRIKDAEESRLR-------------LPKDC 216 + + + +KR + Sbjct: 240 GESLKAQAPITDEEIQTYYNENQDKYSTQEKREVSHILIKGDEADAQAVLARLDAGEDFA 299 Query: 217 NKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK--SQNNTTNPYVTQKGVEYIAIC 273 ++ + G ++ + P+F++ + + + + + G I + Sbjct: 300 TVAKEDSQDIPTAKEGGSLGWIERGVIDPEFEDAAFQLVNVGDHSGLVKSAFGYHIIQLD 359 Query: 274 DKRDLGGEIALK--AYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + K A + A +L A Sbjct: 360 AIEAPKTKPLAKVSADIKAFLVDEHAADAFYSMQTELAEKAF 401 >gi|53715356|ref|YP_101348.1| peptidyl-prolyl cis-trans isomerase [Bacteroides fragilis YCH46] gi|60683325|ref|YP_213469.1| putative exported peptidyl-prolyl cis-trans isomerase [Bacteroides fragilis NCTC 9343] gi|265767843|ref|ZP_06095375.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_16] gi|52218221|dbj|BAD50814.1| peptidyl-prolyl cis-trans isomerase [Bacteroides fragilis YCH46] gi|60494759|emb|CAH09565.1| putative exported peptidyl-prolyl cis-trans isomerase [Bacteroides fragilis NCTC 9343] gi|263252515|gb|EEZ24043.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_16] gi|301164814|emb|CBW24374.1| putative exported peptidyl-prolyl cis-trans isomerase [Bacteroides fragilis 638R] Length = 456 Score = 87.4 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 97/313 (30%), Gaps = 17/313 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQ 66 + F+ + + + + SY + + I E I D+ + AL + + Sbjct: 1 MKKFVN-FKFVVMFALALVANVASYAQDNVIDEVVWVIGDEAILKSDVEEARLAALYEGR 59 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 K +G+ + +EL V+ L + I V N + + Sbjct: 60 KFDGDPYCVIPEELAVQKLYMHQAVLDSIEVPEAEVIQRVDYQISNYIQALGSRERMEAE 119 Query: 127 QGIGDNHFKQYLAIQS---IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 ++ + + + ++ + E+ +++ ++ + Sbjct: 120 FNKTSTQIREAMRENARDGLIVQRMQQKLVGDIKVTPAEVRRYFKELPQDSIPYVPTQVE 179 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLL 238 + I ++ + E R+ K + A + + G+ ++ Sbjct: 180 VQIITQQPKIPVAEIEDVKRRLREYTDRINKGESDFSTLALLYSEDRGSAIKGGETGFMG 239 Query: 239 ESDLHPQFQNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT-PT 295 + + P++ N+ Q+ + ++ G I + +KR G+ ++ + Sbjct: 240 KGQMVPEYANVAFNLQDTKKISKIVESEYGFHIIQLIEKR---GDRINTRHILLKPKVSD 296 Query: 296 KIEKHEAEYVKKL 308 K + + Sbjct: 297 KELDEANARLDSI 309 >gi|218781789|ref|YP_002433107.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfatibacillum alkenivorans AK-01] gi|218763173|gb|ACL05639.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfatibacillum alkenivorans AK-01] Length = 624 Score = 87.4 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 19/260 (7%), Positives = 65/260 (25%), Gaps = 13/260 (5%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 +T D A L + + + +E + + + Sbjct: 139 VTSKDYEAEKARNMLSTKIRSY------LMAMAQVSDEEARQWYNWDAKQVSMKYVLFEP 192 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 ++ + + DF+ + + EI Sbjct: 193 STFTDVVATEDQIQAYYDAHSADYETLPMAKVSYLYFNPKDFLKEVSIPQEEIELFYDDN 252 Query: 171 ---KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + + ++ D + K+ ++ E ++F+ Sbjct: 253 LDSYYEDQQVHARHILISLAKDAPEEKAAEALKKAQEIEAKAKAGEDFAELAKEFSDGPT 312 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI--AL 284 + G + F++ + ++P T G I + + ++ + + Sbjct: 313 AKNGGDLGSFPRGRMVKPFEDAAFALNAGEISDPVRTDFGFHIIKVEEIKEARTKELSEV 372 Query: 285 KAYLSAQNTPT-KIEKHEAE 303 + + ++ +++ Sbjct: 373 EDSIRSKLAADVALDEAYNA 392 >gi|269103549|ref|ZP_06156246.1| peptidyl-prolyl cis-trans isomerase SurA [Photobacterium damselae subsp. damselae CIP 102761] gi|268163447|gb|EEZ41943.1| peptidyl-prolyl cis-trans isomerase SurA [Photobacterium damselae subsp. damselae CIP 102761] Length = 357 Score = 87.4 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 29/237 (12%), Positives = 87/237 (36%), Gaps = 7/237 (2%) Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 +ETL+ Q+ ++ GI D + + Q A+ +S + L + GI F+ + Sbjct: 1 METLQVQQAKQMGIRIDDSQLEQAIGQIAKERNMSIDQLRQQLAQYGISFADFRDQIRRD 60 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + + + L E+ Q++ T + I ++ ++ Sbjct: 61 LMASEARTAIVRRRINILPQEVENLAQQLGQQTQQNTEYNISQIQIRVDESASKAERDAA 120 Query: 202 IKDAEESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNT 257 ++A++ L + + ++ + G+ ++ + ++ F + +K + + Sbjct: 121 KEEADKLVKDLNDGADFAKLAYTYSKGPKALKGGEWGWMSKEEMPTIFADQIKNNGKGAI 180 Query: 258 TNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 P+ + G + I D + + ++ + + + + ++++R Sbjct: 181 IGPFRSGVGYHILKINDVKGLQTVSVMEVKARHILLKPSVILSDAGAKQELEQVRQK 237 Score = 78.9 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 16/121 (13%), Positives = 45/121 (37%), Gaps = 3/121 (2%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254 Q+ + ++ + + + G+ + P F++ ++ Sbjct: 227 AKQELEQVRQKILSGKETFAQAAKAISQDPGSAANGGELGWQTPDLYVPAFKDKVETLPV 286 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + P+ T G + + +R++ + ALK K + ++++LR++A Sbjct: 287 DTISQPFKTVHGWHIVEVEGRRNVDRTDAALKNRAYRILFNRKFNEEAQTWLQELRASAY 346 Query: 314 I 314 I Sbjct: 347 I 347 >gi|297568757|ref|YP_003690101.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfurivibrio alkaliphilus AHT2] gi|296924672|gb|ADH85482.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfurivibrio alkaliphilus AHT2] Length = 305 Score = 87.4 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 35/312 (11%), Positives = 84/312 (26%), Gaps = 47/312 (15%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKRIALLKLQKINGE 71 T I C++ + ++ + S ING +T ++ + E Sbjct: 4 AKKTAMMFAISMCMISGGAAQAGSASDPGDYVAKINGTTLTMEEVKTEM----------E 53 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L AVQ Q+ + DS Q A Q Sbjct: 54 LRPEAVQ------GFLQQHGGAAHFVDSLVTKEILYQEA----------LKHDLDQLPRL 97 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + ++ +V+ K + + + + ++ Sbjct: 98 QELVRDFRKTTLASLLVEKKLSDKIELNDEVLQRYLHENAEEFTVKTAVQVSKIV----- 152 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQNLL 250 ++ ++ + ++F+ + + G ++ L + Sbjct: 153 ----VETPEKAREVQARLAASDDFAVVAQQFSRHEESAANGGDLGFVGRQALPSDLAHHA 208 Query: 251 KK--SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT----KIEKHEAEY 304 Q + P V G+ ++ + D R G++ + T + +Y Sbjct: 209 FNVLRQGEISAPIVQSGGIYFLKVSDYR---GDLPEFDKIRQLLTQQVAPHLRQNAFEQY 265 Query: 305 VKKLRSNAIIHY 316 + +L+ I Sbjct: 266 LAELKEEYQIEI 277 >gi|110346927|ref|YP_665745.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mesorhizobium sp. BNC1] gi|110283038|gb|ABG61098.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chelativorans sp. BNC1] Length = 290 Score = 87.4 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 87/305 (28%), Gaps = 53/305 (17%) Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---SKRIALLKLQKINGELEKI 75 + I + ++ + A + + ++G+ IT D+ + + Q + Sbjct: 14 ILITTIVSLSLLLGSVAGAQDASVVGRVDGQDITADDLAIAEQMYSQQLGQMPEDARRSM 73 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 V LI + + K+ + A Sbjct: 74 LVDALIELRIVAEAARKANVADQEAYKRQLAFFEA------------------------- 108 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 QS+ ++ + ++ +++ K V E +R +L + ++ Sbjct: 109 -----QSLRSLFLEQRVAAAVTDEAVKAAYDERVGKIPPVLERRLRHILLRSESDAVEVI 163 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKS 253 ++ ++ ++ V G ++ E + P+ K Sbjct: 164 EALK-----------GGKAFAELAQERSADEVSKVKGGDLGFVAEGQVVPEVDAAAAKLQ 212 Query: 254 QNNTTN-PYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 T P + G + + + R A+ + T+ + + +LR+ Sbjct: 213 PGEFTQSPVASAFGFHVVLVEETRNRPPPAFEAVAPQIRQALEATEERRI----ISELRA 268 Query: 311 NAIIH 315 A + Sbjct: 269 AAKVE 273 >gi|222110395|ref|YP_002552659.1| ppic-type peptidyl-prolyl cis-trans isomerase [Acidovorax ebreus TPSY] gi|221729839|gb|ACM32659.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax ebreus TPSY] Length = 640 Score = 87.4 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 32/405 (7%), Positives = 95/405 (23%), Gaps = 102/405 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58 M + I + + ++I I+ + ++ S + ++G+ IT D Sbjct: 1 MFESIRKHSK--IVMFLLFLLIIPSFILVGIDSNYFSGGSPVVARVDGKDITQADWDNAH 58 Query: 59 RIALLKLQKI----------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 R+ +++ + + ++ L+ + + + + + + Sbjct: 59 RMESDRIRAQSPGIDAKLLDSPQARYATLERLVRDRVLQVAAQDMHMLTSDARLARELQS 118 Query: 109 HAR-------NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + + L AE + + QG+ + + V+ Sbjct: 119 IPQIAALKRADGTLDAEAYRALAGAQGLTPEGLEARIRQDLSVNQVMGGVMGSAFSGPAE 178 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTV----- 183 F+ K + ++ A + Sbjct: 179 ARLALDALFQRREIQIARFNASAFVSKVVVTDADLEAYYTAHPAKFQQAEQASVEYVVLD 238 Query: 184 -----------------LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + N+L + + S+ + + A ++ Sbjct: 239 LDAVKAGITLSEDDLRTYYKENLNRLAGKEERRASHILINASKDAPADARTQAKAKAEEL 298 Query: 227 HDV-----------------------SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYV 262 S G + + F++ + + ++ Sbjct: 299 LAQVRKAPGSFAEIAKKESQDPGSAPSGGDLGFFGRGAMVKPFEDAVFSMKKGEISDVVE 358 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 T G I + D + L ++ + Sbjct: 359 TDFGFHIILLSDIK--TPRQPSFEELRPSLEAELKQQQAQRKFAE 401 >gi|296445269|ref|ZP_06887228.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylosinus trichosporium OB3b] gi|296257224|gb|EFH04292.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylosinus trichosporium OB3b] Length = 335 Score = 87.4 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 28/278 (10%), Positives = 74/278 (26%), Gaps = 27/278 (9%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 S + + IT + + L ++ ++ + Sbjct: 63 KTSDDVVAHVGATDITTSQLRAYVEALGAREQAAIAKEPGL------------------- 103 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 ++ + E + D+Q +Q + + Sbjct: 104 -----LSQAVRAMLNERVVLQEALAKKWDQQPKVAAQLEQLRERALVESYLQSVSVPPAD 158 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 E E+ ++ V + + K ++ K K E+ + +L Sbjct: 159 YPSEEELQKAYDANRSSFVVPRQFQLGHIFVQSPKDADRATEDKAKKTLEDIQRKLKSGA 218 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDK 275 + ++ G+ +L E + P+ + + + + P G ++ + D Sbjct: 219 DFAAVAKAQSEAKDGGELGWLAEGQIRPEIRTRVMGLVKGAVSEPIQLDDGWHFVKLIDT 278 Query: 276 R--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + L+ Q + YV +L Sbjct: 279 KASTTRPLAEAREQLAQQMRVERAGLLRRAYVAELVKR 316 >gi|291616553|ref|YP_003519295.1| PpiD [Pantoea ananatis LMG 20103] gi|291151583|gb|ADD76167.1| PpiD [Pantoea ananatis LMG 20103] Length = 646 Score = 87.4 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 36/396 (9%), Positives = 99/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + + +++ F + + +Y + +NG+ I+ + + Sbjct: 24 MMDNLRAASNHVVLKIILGLIILSFVLTGVGNYLIGGNNDY-AAKVNGQEISRAQLDQAF 82 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + ++ ++ + A+ +LI + L I+ I + V Sbjct: 83 NSERNRQQQMLGDQFSQLAGNDGYMQQMRQQALSQLIDQALLDSYIKDLHIAISDDQVKQ 142 Query: 105 FFVQHAR---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 A N +++ + G + + + L Q ++ Sbjct: 143 AIFNQAAFQTNGKFDNAKYNAMIGNMGFTADQYAEALRKQLATQQLINAIANTDFMLKNE 202 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K + EI Q+ KN + R + Sbjct: 203 TSKLVDLVAQKRDIQTATLDVNALAAKQTVNDDEINQYYQQHKNSFMAPEQFRVSYIKLD 262 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ Sbjct: 263 AAGMQENASDADIQAWYDQHKADYTQPQRDRYSVIQTKTEADANAILAQLKSGADFAELA 322 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--R 276 + + G +L S + +N K + + + G + D Sbjct: 323 KTKSIDPISARKGGDMGWLEPSTTPDELKNAGLKEKGQLSGVIKSSVGFLIARLDDIIPE 382 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + +++ ++ + K + +K+ A Sbjct: 383 QVKPLADVRSEVADEVKQEKAVDAFYKLQQKVSEAA 418 >gi|242240288|ref|YP_002988469.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Dickeya dadantii Ech703] gi|242132345|gb|ACS86647.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dickeya dadantii Ech703] Length = 626 Score = 87.4 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 35/398 (8%), Positives = 104/398 (26%), Gaps = 87/398 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + ++ F + + Y +NG+ I+ + + + Sbjct: 1 MMDNLRAAANNVVLKVILALIVGSFVLTGVGDYLIRGSGDY-AAKVNGQEISRAQLEQAV 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + ++ +L K A+ +LI +TL Q G+ V Sbjct: 60 QNERNRQQEMLGENFSALAANEGYMQQLRKQALSQLIDDTLIDQFARNLGLNISDEQVKQ 119 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY----- 156 N E + + + + G+ + + Q L Q + +V+ + Sbjct: 120 AIFSVPAFQTNNRFDNEKYLAQVQQLGLTPDVYAQLLRKQLVTQQLVRGLGGSNFQLPQE 179 Query: 157 ----------------------------GNLEMEIPANKQKMKNITVREYLIRTVLFS-- 186 + EI + + + + Sbjct: 180 IDNLVAIAAQDRTIRTATIDLDARAKTQTASDDEIQNFYNQNSSRYLAPEQFKVSYIMLD 239 Query: 187 -----------------IPDNKLQNQGFVQKRIKDAEESR------------LRLPKDCN 217 + ++R + + + Sbjct: 240 AAAIMDKISVDSAAVSSYYEQHKSEFTQPERRKYSIIQLKNEADAKAVLEQLHKGADFAA 299 Query: 218 KLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK- 275 ++ ++ I + G ++ + + + + + ++ + G + + D Sbjct: 300 LAKEKSTDIVSRRNGGDLGWMDGNSTVDEIKQANLQQKGQLSDVVKSSVGYLIVRLDDIQ 359 Query: 276 -RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + ++ L + K +KL A Sbjct: 360 VQRVRSLDEVRGDLGDKVKREKALDEFYAQQQKLSEAA 397 >gi|167624682|ref|YP_001674976.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella halifaxensis HAW-EB4] gi|167354704|gb|ABZ77317.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella halifaxensis HAW-EB4] Length = 621 Score = 87.4 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 44/402 (10%), Positives = 96/402 (23%), Gaps = 95/402 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ I V++ F + SY + T+NGE I++ + + Sbjct: 1 MLEKIREGSQGVIAKSILVLVILSFAFTGVSSYLGSSTEVA-AATVNGEEISNSALEQAY 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELI-----------------VETLKK 87 + + +++ ++ L+ E +K Sbjct: 60 QNERSRLEQQLGDMFATLSADDNYMQSVKQSVLERLVAETLLDQNAAELGLRVSDEQIKA 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN--------------- 132 + + D N + R G A F + Sbjct: 120 AIMTEPAFQTDGRFDNDRYQAILRQLGYQANSFRDMMRTDMTRRQLVATLVGSEFVLPGE 179 Query: 133 ----HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS-- 186 Q + + F+ + +I + +R ++ Sbjct: 180 AKYLADLQGQTRDIDYKVIDATPFLADISVTDEQIKTYYDSNLDQFIRPEVVSLDYIELD 239 Query: 187 -----------------IPDNKLQNQGFVQKRIKDAE-------------------ESRL 210 D N +KR+ + Sbjct: 240 AKDLAKDVKVTDADAQAYYDEHKANYTQAEKRLAAHILVQAGDDDAAAKAKAEAIYKQLQ 299 Query: 211 RLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVE 268 + + G+ + + P+F L ++ + +N T G Sbjct: 300 DGADFAELAKTESEDTFSGEQGGQLDWFEAGVMEPEFDTALFALNKGDYSNVVKTNFGYH 359 Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 I + D + G A A + + EK + +L+ Sbjct: 360 IIKLLDIQ--AGAEAPFADVKEKIIAQLQEKQAVDKFYELQQ 399 >gi|49480029|ref|YP_035403.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331585|gb|AAT62231.1| peptidyl-prolyl cis-trans isomerase (protein export protein) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 285 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 80/304 (26%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + +++ SS T IT D K++ K Sbjct: 4 KHIFIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E+I + + ++ + S D + + + + FK Sbjct: 56 LYEMIAQDVITKKYKVSDDDVDKEVQ-------KAKNQYGDQFKNVLKNNGLKDEADFKN 108 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + +K K + Sbjct: 109 QIKFKLSMNKAIKQSVTEKDVKD------------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLEAGASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLKI 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK++L +K + +I + ++K A Sbjct: 205 GQISNPVKSPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERIADPTFSHKLLQKELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|313207040|ref|YP_004046217.1| ppic-type peptidyl-prolyl cis-trans isomerase [Riemerella anatipestifer DSM 15868] gi|312446356|gb|ADQ82711.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Riemerella anatipestifer DSM 15868] gi|315022566|gb|EFT35593.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Riemerella anatipestifer RA-YM] gi|325335523|gb|ADZ11797.1| peptidylprolyl isomerase [Riemerella anatipestifer RA-GD] Length = 455 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 24/305 (7%), Positives = 84/305 (27%), Gaps = 11/305 (3%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 F + + K + I + E++ + DI ++ + Q Sbjct: 9 FLLSFFITLLSFNAHAQLKPGDLVDGIAAVVGNEIVLESDIEQQENYARQQGAQTANRCE 68 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYF-----FVQHARNTGLSAEDFSSFLDKQGIG 130 +++++ L E +K + + + + + E +++ + Sbjct: 69 FLEKVLSNKLLIYEAKKDTLIENHSEAIKQQAEAKYNELLAQFPSEKELLAAYKFRNSFE 128 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV--REYLIRTVLFSIP 188 + + + E+ K ++ + + P Sbjct: 129 MKSAIEQIDTDQYYGQAKYQRITSGVNITPNEVTDFYNIYKGQLPMVKDEISLAKITLYP 188 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQ 247 ++Q + ++ ++ ++ + G + + + + F+ Sbjct: 189 KLTKEHQQKLIDKLNQIKKDIEGGESFEKMARIYSEDPGSAATGGLYKNIAKGAMVKAFE 248 Query: 248 NLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 + + P ++ G I + + G + L T+ + + Sbjct: 249 AAALNLQEGELSKPIESEFGYHLIQL--IKKSGKFYDARHILLKAEPNTEEIAAAKKELN 306 Query: 307 KLRSN 311 ++R Sbjct: 307 EIRKQ 311 >gi|289422639|ref|ZP_06424480.1| foldase protein PrsA [Peptostreptococcus anaerobius 653-L] gi|289156939|gb|EFD05563.1| foldase protein PrsA [Peptostreptococcus anaerobius 653-L] Length = 349 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 90/312 (28%), Gaps = 23/312 (7%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--------------LQK 67 L + +++ + A S+ T+NG+ I+ +I ++ K ++ Sbjct: 4 LASILLAAVIAVSTAACSNNEVATVNGKSISSKEIENQLKFQKWMMESQYGEEVWTQMEA 63 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 + ++ +++ + + + ED + Sbjct: 64 QDKNYQETMKKQVATSVSRIRAFTDYAEKNGVKPDQKQLKEFQAQNKKMLEDEKMKKSFE 123 Query: 128 GIGDNHFK-QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 G + A + + K E E+ +K +++ T + Sbjct: 124 KTGLDEKFLDDFAKEKATMVSLSEYLKKKSKPTEKELKDYYEKNSVKAKAAHILLTTTDT 183 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKI-HDVSIGKAQYLLESDLHP 244 + K+ D + +K + + G+ + + P Sbjct: 184 NGKPLSPEKKAEVKKKADKIYEEAKSGVDFKELAKKNSQDPGSAQNGGELGEFGKGQMVP 243 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 +F+ + + P TQ G I + +K +KA + A + K +K Sbjct: 244 EFEKAVFSMKEGEISKPIETQYGYHIIKL-EKITKSEFDKVKAEMEAALSQEKAQKLAQS 302 Query: 304 YVKKLRSNAIIH 315 + A I Sbjct: 303 II----DAAKIQ 310 >gi|290474659|ref|YP_003467539.1| peptidyl-prolyl cis-trans isomerase, for periplasmic folding of outer membrane proteins [Xenorhabdus bovienii SS-2004] gi|289173972|emb|CBJ80759.1| peptidyl-prolyl cis-trans isomerase, for periplasmic folding of outer membrane proteins [Xenorhabdus bovienii SS-2004] Length = 623 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 38/398 (9%), Positives = 99/398 (24%), Gaps = 87/398 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S + +NG+ I+ + + Sbjct: 1 MMDNLRTAANGPVLKIVLALIILTFVLTGVTGYLSSEGGNY-AAKVNGQTISRAQLEQAF 59 Query: 61 A----------------LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 LL ++ ++ + ++ LI L Q K G++ V Sbjct: 60 QQDKIALQDRLGDQFSTLLSDEQKVQQIRRSSLDRLITVILSDQYARKLGLSASDEQVKE 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + + + L ++F + + I ++ Sbjct: 120 EIRNLPFFQTDGKFDNNKYLTLLTGANRSPDNFAEQVRQDLINRQLMSILTGSEIALPTE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV----- 183 + + E+ N ++ Sbjct: 180 IKQETALAFQERTVRFATLELKSIEAQQKVTDKELKNYYDVNSNSFTVPEKVKVSYIKMD 239 Query: 184 --------------LFSIPDNKLQNQGFVQKRIKDA-------------EESRLRLPKDC 216 + N L V+++ +E + Sbjct: 240 AADELKSVTVSDADIEKYYKNNLPQYMQVEQKKYSMVQLVSDAEAKSVLDELKKGADFSK 299 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 EK K G ++ ES L + ++ + + G + D + Sbjct: 300 LAAEKSTDKFSAQKGGDLGWMEESSLPDEIKSAKLIEKGQLSGVIKLSGGYAIFRLDDIK 359 Query: 277 DLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + +++ + K +K+ A Sbjct: 360 PQIIKSLVEVRSEIEKIVKQEKAVDAFYALQRKVSDAA 397 >gi|319957104|ref|YP_004168367.1| ppic-type peptidyl-prolyl cis-trans isomerase [Nitratifractor salsuginis DSM 16511] gi|319419508|gb|ADV46618.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitratifractor salsuginis DSM 16511] Length = 287 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 90/302 (29%), Gaps = 44/302 (14%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI------NGELEKIA 76 ++ + + +S + +NG IT +++ + + + + +K Sbjct: 5 LLATALSFSMGATLLSASDVIAVVNGHKITKAEVNTFLRQSMPNQPITYDMLDPKTKKKV 64 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + LI + + +K+G+ + Sbjct: 65 LDGLIETEILAEAAQKAGVEKNPEF-------------------------------QQML 93 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 +A + + + D K E E QK ++ R + + K + Sbjct: 94 DMAKKKLMINAWAKDEFKKIIVSESEAKEFYQKHQDKFTRPAQVHARHILVKSEKKAQEI 153 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH-PQFQNLLKKSQN 255 Q + E + R +K ++ G Y + + P + ++ Sbjct: 154 IDQLKGLKGEALQKRF---IELAKKESTGPTGPKGGDLGYFGKDQMVLPFSKAAFALNKG 210 Query: 256 NTT-NPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 T P TQ G I + DK+ A+K + A + + + + L+ A Sbjct: 211 EITTKPVKTQFGWHVIYVEDKKPAQTIPFDAVKDRVIAALKQQRFAEKMKKETELLKKKA 270 Query: 313 II 314 I Sbjct: 271 SI 272 >gi|163745064|ref|ZP_02152424.1| PPIC-type PPIASE domain protein [Oceanibulbus indolifex HEL-45] gi|161381882|gb|EDQ06291.1| PPIC-type PPIASE domain protein [Oceanibulbus indolifex HEL-45] Length = 282 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 30/279 (10%), Positives = 72/279 (25%), Gaps = 50/279 (17%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGIT 96 + T+N IT G + A L Q L + + +L+ +T Sbjct: 30 DTVVATVNDTEITLGHMLVARATLPQQYQQLPDDVLFQGILDQLVQQTALA--------- 80 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 SF + + + ++ Sbjct: 81 ------------------------DSFTGELPPRVTLSIENETRSLTAGEAIEGVMAEDV 116 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + E++ + Q +E+ +L + + ++ Sbjct: 117 SDEELQAAYDAQYKDAEPEQEFNASHILVETKEEADAIKAELE-----------GGADFA 165 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDK 275 ++ ++ G + + P+F+ + + P TQ G I + + Sbjct: 166 EVAKEKSTGPSGPGGGSLGWFGPGMMVPEFEEAVAGMEAGGVSEPVETQFGWHVIKLNET 225 Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 R GE + + + ++ L A + Sbjct: 226 R--TGEAPALEDVREELETQVRQTKVQTAIESLTEAAKV 262 >gi|121594957|ref|YP_986853.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax sp. JS42] gi|120607037|gb|ABM42777.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax sp. JS42] Length = 640 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 32/405 (7%), Positives = 95/405 (23%), Gaps = 102/405 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58 M + I + + ++I I+ + ++ S + ++G+ IT D Sbjct: 1 MFESIRKHSK--IVMFLLFLLIIPSFILVGIDSNYFSGGSPVVARVDGKDITQADWDNAH 58 Query: 59 RIALLKLQKI----------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 R+ +++ + + ++ L+ + + + + + + Sbjct: 59 RMESDRIRAQSPGIDAKLLDSPQARYATLERLVRDRVLQVAAQDMHMLTSDARLARELQS 118 Query: 109 HAR-------NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + + L AE + + QG+ + + V+ Sbjct: 119 IPQIAALKRADGTLDAEAYRALAGAQGLTPEGLEARIRQDLSVNQVMGGVMGSAFSGPAE 178 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTV----- 183 F+ K + ++ A + Sbjct: 179 ARLALDALFQRREIQIARFNASAFVSKVVVTDADLEAYYTAHPAKFQQAEQASVEYVVLD 238 Query: 184 -----------------LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + N+L + + S+ + + A ++ Sbjct: 239 LDAVKAGITLSEDDLRTYYKENLNRLAGKEERRASHILINASKDAPADARTQAKAKAEEL 298 Query: 227 HDV-----------------------SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYV 262 S G + + F++ + + ++ Sbjct: 299 LAQVRKAPGSFAEIAKKESQDPGSAPSGGDLGFFGRGAMVKPFEDAVFSMKKGEISDVVE 358 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 T G I + D + L ++ + Sbjct: 359 TDFGFHIILLSDIK--TPRQPSFEELRPSLEAELKQQQAQRKFAE 401 >gi|328552623|gb|AEB23115.1| molecular chaperone lipoprotein [Bacillus amyloliquefaciens TA208] gi|328911027|gb|AEB62623.1| molecular chaperone lipoprotein [Bacillus amyloliquefaciens LL3] Length = 285 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 28/303 (9%), Positives = 84/303 (27%), Gaps = 42/303 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + I + + + + + +T G++ + Sbjct: 1 MKKIAIAAITATSVLALSACSSGDNDVIAKTDAGNVTKGELYTNMK--------KTAGAS 52 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +L+ E + ++ + S D L + + + Sbjct: 53 VLTQLVQEKVLAKKYKVSDKEID--------------NKLKEYKTQLGDQYSALKQQYGE 98 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 YL Q + + + + + +K +++ Sbjct: 99 DYLKDQVKYELLAQKAAKDNIKVTDSDTKEYYDGLKGKIRASHIL--------------- 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQ 254 +K + E+ + K +++++ + G + + + F + Sbjct: 144 VADKKTADEVEKKLKKGEKFETLAKEYSTDSSKDNGGDLGWFDKKSMDETFSKAAFGLKV 203 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 ++P T+ G I ++R G +K L + K+ ++K+ A Sbjct: 204 GQVSDPVKTKFGYHIIKKTEER--GKYDDMKKELKEEVLKQKLNDNSAVQAAIQKVMKKA 261 Query: 313 IIH 315 + Sbjct: 262 DVK 264 >gi|295401098|ref|ZP_06811072.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus thermoglucosidasius C56-YS93] gi|312112126|ref|YP_003990442.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp. Y4.1MC1] gi|294976891|gb|EFG52495.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus thermoglucosidasius C56-YS93] gi|311217227|gb|ADP75831.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp. Y4.1MC1] Length = 278 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 94/301 (31%), Gaps = 41/301 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S S S I T +G+ IT + + + K Sbjct: 1 MKKWMIAAAVASVFALSACSNGDSEVIVKTKDGD-ITKEEFYNEMK--------ARVGKE 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 +++L+ E + ++ + + D N + + + ++ Sbjct: 52 VIRDLVHEKVLSKKYKVTDKEIDKEIENLKDMYGVQYDLVVQQNGEKA------------ 99 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + M + E+ + K +++ Sbjct: 100 --IRDMVKLDLLRQKAAMEDIKVTDKELKDYYENYKPKIRASHIL--------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 +K K+ + + ++++ + G + + + +F++ K Sbjct: 143 VKDEKTAKEIKAKLDKGEDFAKLAKQYSQDPGSASNGGDLGWFGQGKMVKEFEDAAYKLK 202 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE-KHEAEYVKKLRSNA 312 ++P T+ G I + DK + +K + + +K++ V+KL +A Sbjct: 203 VGEISDPVKTEYGYHIIKVTDKEEKKPFNEMKEEIEFEVKRSKLDPAKMQAKVEKLVKDA 262 Query: 313 I 313 Sbjct: 263 K 263 >gi|153004233|ref|YP_001378558.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. Fw109-5] gi|152027806|gb|ABS25574.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. Fw109-5] Length = 523 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 36/372 (9%), Positives = 95/372 (25%), Gaps = 69/372 (18%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-----TINGEVITDGD 55 M + + I + ++++F I + +NG+ I + Sbjct: 1 MLEGLRANKGGIITWIFLGAIILVFVISFGPGSLNQGGGCAGAGASYAAKVNGKTIPAVE 60 Query: 56 ISKRIALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++ + L + L + A+ +L+ L QE ++ GI + Sbjct: 61 WERQYSQLYDLYQSQMGGGFTRELAAQLGLAEQALSQLVDRELVIQEAKERGIVVSDEEL 120 Query: 103 NYFFVQHARNTG---LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-------- 151 + E + + + F+ + Q ++ ++ Sbjct: 121 SSAIHAIPAFHRSGAFHFETYEAAARQNFGSPAKFESWYREQLLYGKMLAAVGETVKVSG 180 Query: 152 -------------------------FMLKYGNLEME-----------IPANKQKMKNITV 175 F + + E I + Sbjct: 181 AEVKEAWQADADKLSLSFVRFPLAAFQAEVKPSDAEVKAFAEKDGARIEQFHKDNAARFD 240 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKA 234 ++ +R + +K+I++A + + + G Sbjct: 241 QQKKVRVRHVLARVTPGADDAAARKKIEEAAARVKQGEAFEKVVAALSDDEGTKARGGDL 300 Query: 235 QYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293 ++ E QF + L Q + P + G + + + + A Sbjct: 301 GFVTEGLFDEQFAKAALALEQGQVSAPVRSASGWHLVKAEEV--VPAKKVSLADARLDIA 358 Query: 294 PTKIEKHEAEYV 305 +++ A + Sbjct: 359 RELLQQDRARKL 370 Score = 42.4 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 22/50 (44%), Gaps = 3/50 (6%) Query: 269 YIAICDKRDLGGEIA---LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 +A+ R+ E A + ++ + K + + +++ LR +A I Sbjct: 461 VVAVVTARETPDEKAFEGARDQVAERLRNEKEAQVVSRWLEGLRKDAEIE 510 >gi|111114930|ref|YP_709548.1| basic membrane protein [Borrelia afzelii PKo] gi|216263862|ref|ZP_03435856.1| basic membrane protein [Borrelia afzelii ACA-1] gi|110890204|gb|ABH01372.1| basic membrane protein [Borrelia afzelii PKo] gi|215979906|gb|EEC20728.1| basic membrane protein [Borrelia afzelii ACA-1] Length = 336 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 102/334 (30%), Gaps = 37/334 (11%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKLQKING-- 70 + ++ L+I V I S+ + IN E+IT ++ + K + Sbjct: 1 MKSFLFLVILGTVGINSFAQ----NTPVAIINLYKNEIITKTSFDSKVDIFKKTQGRDLT 56 Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 +K +Q LI + L QE K GI + V + E ++KQG Sbjct: 57 AAEKKQVLQVLIADVLFSQEASKQGIKISDDEVMQTIRTQFGLVNFTDEQIKQMIEKQGT 116 Query: 130 GDNHFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + +V + F E EI + K V + R Sbjct: 117 NWGELLSSMKRSLSSQKLVLKQAQPRFSEVKTPSEKEIIEYYEANKTRFVNPDISRVSHV 176 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDL-- 242 + + + + R + + K+++ G +L D Sbjct: 177 FFSTKDKKRSDVLDQAKNILSQIRSKKITFEEAVRKYSNDESSKAKNGDLGFLSRDDQNA 236 Query: 243 -----HPQFQNLLKKSQNNTTNPYVTQKGVEYIAI-----------CDKRDLGGEIALKA 286 + + ++ + ++P +++G + + DK ++ +K Sbjct: 237 QNLLGPDFIKEVFNFNKGDISSPIASKEGFHIVKVTEKYAQRFLGLNDKVSPATDLIVKD 296 Query: 287 YLSAQNTP----TKIEKHEAEYVKKLRSNAIIHY 316 + + + + + KL +A I Sbjct: 297 AIRNNMVNIQQQQIVVQVQQDVYGKLNKSASIQI 330 >gi|238751010|ref|ZP_04612506.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia rohdei ATCC 43380] gi|238710700|gb|EEQ02922.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia rohdei ATCC 43380] Length = 628 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 38/399 (9%), Positives = 107/399 (26%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + +++ F + + SY + +NG+ I+ + + + Sbjct: 1 MMDNLRAAANNVVLKIILALIMLSFILTGVGSYLIGGSNDF-AAKVNGQEISRAQLEQAV 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + ++ + + +L+ L Q +K G+T V Sbjct: 60 QSERSRMQQQLGEQFSALAANEGYMQQMRQQVLGQLVNNMLLDQYAKKLGLTASDAQVKD 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ----------------------- 141 Q D S +L Q+ +Q Sbjct: 120 AIRQAPYFQTEGKFDNSKYLALVNQMGYTPDQFAQLQRQQLINQQLLQAFGDTGFVLPAE 179 Query: 142 -------SIWPDVVK------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + V+ + + E+ A + KN + ++ ++ Sbjct: 180 AQAMSELILQQRDVRLATLDLKALQAQQKVTDEELQAYYDQNKNSFIAPEQMKISFIAMD 239 Query: 189 DNKLQNQG-------------------------------FVQKRIKDAEESRLRLPKDCN 217 +Q++ + K A + + Sbjct: 240 AAAMQDKITVTEEDITAYYDLHKSSYTQPEQRNYSVIQFKTEADAKAALDELKKGADFAT 299 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ I + G+ +L + + + ++ + G + + D + Sbjct: 300 IAKEKSTDIISRKNGGELGWLEPDTTADELKQANLSDKGQLSDVVKSSVGYLIVRLNDIK 359 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + L+ Q K +K+ A Sbjct: 360 PEQVKPLSEVHDALAKQVKQEKAVDAYYALQQKVSEAAT 398 >gi|259909248|ref|YP_002649604.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Erwinia pyrifoliae Ep1/96] gi|224964870|emb|CAX56392.1| Peptidyl-prolyl cis-trans isomerase D [Erwinia pyrifoliae Ep1/96] Length = 622 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 30/395 (7%), Positives = 104/395 (26%), Gaps = 85/395 (21%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + + + + +++ F + + Y + +NG+ I + + + Sbjct: 1 MDNLRAASNHVVLKVILGLIILSFILTGVGGYLTGGSGDY-AAKVNGQEIGRAQLERAFS 59 Query: 62 LLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 + ++ ++ + A+ +LI E L Q ++ G+ + + Sbjct: 60 SERARQQQMLGEQFSVLAGNEGYMQQMRQQALSQLIDEMLLTQYAKEIGLAIGDDQIKQA 119 Query: 106 FVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV-------------- 148 + S ++ G + + + L Q ++ Sbjct: 120 IFTQPAFQTDGKFDNAKYLSIINNMGFTADQYAEALRKQLTTQQLIGSVTGTDFVLGNET 179 Query: 149 --------KNDFMLKY-----------GNLEMEIPANKQKMKNITVREYLIRTV------ 183 + + + + EI Q+ ++ + R Sbjct: 180 DSLAALVAQQRLVREVTINVNALAAKQNVTQEEIANYYQQHQSSLMSPEQFRVSYIKMDA 239 Query: 184 -----------LFSIPDNKLQNQGF------------VQKRIKDAEESRLRLPKDCNKLE 220 + S + + + ++ + + Sbjct: 240 SAMLQPVSESDIQSWYQQHQDDYTQPQRNRYSIIQTKTEAEARSVLDALNKGGSFAKLAK 299 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + ++ + G +L + +N K + ++ + G + D + Sbjct: 300 EKSADPISARNGGDMGWLEPETTPDELKNAALKEKGQLSDVITSSVGFIVARLDDTQPEK 359 Query: 280 GE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + ++ + K + +K+ A Sbjct: 360 VKALSEVHDEIARKLKQEKAVVAFYKLQQKVSDAA 394 >gi|170763930|ref|ZP_02635346.2| putative foldase protein PrsA [Clostridium perfringens B str. ATCC 3626] gi|170764086|ref|ZP_02631748.2| putative foldase protein PrsA [Clostridium perfringens E str. JGS1987] gi|170662690|gb|EDT15373.1| putative foldase protein PrsA [Clostridium perfringens E str. JGS1987] gi|170712067|gb|EDT24249.1| putative foldase protein PrsA [Clostridium perfringens B str. ATCC 3626] Length = 326 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 38/314 (12%), Positives = 86/314 (27%), Gaps = 20/314 (6%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING------------ 70 +V A+ T+NGE IT G++ + + Q + Sbjct: 2 FSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFAQMKSQYGDKYMDDPQVA 61 Query: 71 ----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 + + VQ L+ + + E +K GI + + N D + Sbjct: 62 QQILQQRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQFENIKKGMGDNFDKALE 121 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + + + V++ + + + + K V + Sbjct: 122 AEGYTEDTFKDVIKNQVINQAVQDYIIKDVKVTDEDAQKYYDENKQQFVAKDSGVLTKHL 181 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + +N+ + Q + K N + K ++G + Sbjct: 182 LFENEEEAQKAYDEIQSGKTTFNDLFTKYENNKSEN-KKPIAENLGVVPAENSGLVQEFV 240 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAI---CDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 L + + P TQ G I +K +K+ + K + Sbjct: 241 DGLKPLKEGEISKPIKTQFGYHIIQAGATYEKGAQLPFDEVKSQIIQILKQQKDSEKFKA 300 Query: 304 YVKKLRSNAIIHYY 317 + + + + + Y Sbjct: 301 DMDQWKKDLNVKVY 314 >gi|167586945|ref|ZP_02379333.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ubonensis Bu] Length = 259 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 39/278 (14%), Positives = 81/278 (29%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I +A L Q ++++ QEL+ + QE + GI + Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQPDSPQMQQAVRQELVNREILMQEAIRRGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + DF+ K + Sbjct: 85 VKAQV-------------------------------AVAQQTVVLRALIEDFLKKNQPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A ++ L + + + ++ K K + + Sbjct: 114 AEVKARYDELVKGAANRELHLHHILVDNEQQAKDLIAKIKA----------GAKFEDLAK 163 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRD 277 +++ + G + P+F K + T P TQ G I + D R Sbjct: 164 QYSKDPGSGKNGGDLDWADPKAYVPEFAAAATKLQKGQMTDEPVKTQFGWHIIRVDDVRS 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + Q +++ + + LR A + Sbjct: 224 VAP--PPFDQVKPQIAQQMVQQKLQAFEESLRQQAKVQ 259 >gi|229160220|ref|ZP_04288219.1| Foldase protein prsA 2 [Bacillus cereus R309803] gi|228623181|gb|EEK80008.1| Foldase protein prsA 2 [Bacillus cereus R309803] Length = 285 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 77/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT D K++ K Sbjct: 4 KHIFIITALISILMLSACGQKNGSTTVATAIDSTITKSDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + S D + + F + Sbjct: 56 LYEMMAQDVITKKYKVSDDDVDKEL-----------NKVKNQYGDQFKTVLENNRLKDEA 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAVKKSVTEKDVKD--------------------HYKPDIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFASGTMTPEFETAAYKLKV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+DL +K + +I + ++ A Sbjct: 205 GQISNPVKSSNGYHIIKLTDKKDLKPYNEVKDSIRKNLEEERIADPTFSQKLLQDELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|187777480|ref|ZP_02993953.1| hypothetical protein CLOSPO_01048 [Clostridium sporogenes ATCC 15579] gi|187774408|gb|EDU38210.1| hypothetical protein CLOSPO_01048 [Clostridium sporogenes ATCC 15579] Length = 348 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 41/328 (12%), Positives = 103/328 (31%), Gaps = 21/328 (6%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS------KRIALL 63 + +L ++ F +V A + +NGE I D+ + + + Sbjct: 17 KKLLSVLCLGIFILTFTACDMVEKTPEAKAKSTIAKVNGEKIQRKDLEENPRLKQVVNQM 76 Query: 64 KLQKING------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 K+Q E + + ELI E + Q+ ++ + +N + Sbjct: 77 KMQYGEEFEKSEQGKEVLKEQKSQILDELITEKVLLQKGKELKVIPKDEELNKEVDKKFN 136 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 + ++ K+ L +++ ++++E K+ Sbjct: 137 EIKAVYNNDEKKFEETLKSTGFTKETLKEYLKSQIIIEKVINEATKDVKVEDKDAKKYYN 196 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 + + ++ ++ + +K K + + SK + Sbjct: 197 ENQS-MFTEKPNTMNVSHILVKTEDEAKKVKKRLDSKEDFAKVAKEVSQDPGSKDKGGLL 255 Query: 232 GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLS 289 G Y + + + Q +N TQ G I I K++ + A+K + Sbjct: 256 GDINYNDANFDPTFMKAAIALKQGAVSNAVHTQFGYHIIKINSKKEYPVKKYDAVKEDIK 315 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + K ++ + +++ + + I Y Sbjct: 316 KELKMEKQKEAYTKKIEEWKKASKIKTY 343 >gi|83816066|ref|YP_445916.1| peptidylprolyl cis-trans isomerase [Salinibacter ruber DSM 13855] gi|294507826|ref|YP_003571884.1| peptidyl-prolyl cis-trans isomerase surA [Salinibacter ruber M8] gi|83757460|gb|ABC45573.1| peptidylprolyl cis-trans isomerase [Salinibacter ruber DSM 13855] gi|294344154|emb|CBH24932.1| Peptidyl-prolyl cis-trans isomerase surA [Salinibacter ruber M8] Length = 464 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 32/293 (10%), Positives = 90/293 (30%), Gaps = 19/293 (6%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---NGELEKIAVQELIVETLK-KQ 88 ++ + RI + E++ ++ + + Q+ + L A+++L+ + L +Q Sbjct: 36 GQNAQVVDRIAAVVGDEIVLKSEVDQLVRRQTRQQNVSYSNSLWMEALRQLVDQKLLAEQ 95 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV- 147 + IT ++ + A G K+ + Sbjct: 96 ARRDTTITVSDQQLSDQLDRRISQYVERAGSEERLEQAYGKSILEIKEQFREDLRGQILS 155 Query: 148 --VKNDFMLKYGNLEMEIPANKQKMKNIT----VREYLIRTVLFSIPDNKLQNQGFVQKR 201 ++ M E+ +++ + + + ++ + Q Sbjct: 156 QQLRRRRMQSIDITPSEVRQWFEQIPQDSLPQLPKTVRLSHIVRYPKPTEASRQQAKSLI 215 Query: 202 IKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN 259 + +F++ + G + +DL P+F + ++ + Sbjct: 216 TSVRDSIVNGGASLEAMARQFSAPDAAGTASGALTDVNLNDLVPEFAAVASRTPVGQISQ 275 Query: 260 PY--VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 P+ +Q G + I K ++ ++ + K EY+ +R Sbjct: 276 PFYNESQNGFHILRIDAKDGSTVDL---HHVLIKPNAP-TGKRAKEYLSAVRD 324 Score = 42.0 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 17/259 (6%), Positives = 52/259 (20%), Gaps = 21/259 (8%) Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 ++ L ++ + + + D+ + L E + Sbjct: 207 SRQQAKSLITSVRDSIVNGGASLEAMARQFSAPDAAGTASGALTDVNLNDLVPEFAAVAS 266 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + + + + I N K +R L Sbjct: 267 RTPVGQISQPFYNESQNGFHILRIDAKDGSTVDLHHVLIKPNAPTGKRAKEYLSAVRDTL 326 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + D + ++ R+ + Sbjct: 327 VNNEDVSFERMARRHSEEDRTAQNGGRVTDPESGARDLVLDA-------LG-------PS 372 Query: 245 QFQNLLKKSQNNTTNPYVTQ-----KGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKI 297 + + + + P Q + + + + + + K Sbjct: 373 WTRTIRPLEAGDISEPSRVQLLNDDEAYHIVRLDRRVPAHRASLETDYEQIRQRALQDKR 432 Query: 298 EKHEAEYVKKLRSNAIIHY 316 + E+ +LR + Sbjct: 433 SRKMREWTDQLREKIYVDI 451 >gi|325107411|ref|YP_004268479.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces brasiliensis DSM 5305] gi|324967679|gb|ADY58457.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces brasiliensis DSM 5305] Length = 423 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 95/306 (31%), Gaps = 24/306 (7%) Query: 34 KSWAMSSRIRTTINGEVITDGDI----SKRIALLKLQKINGEL----EKIAVQEL---IV 82 + S + +NG + GD+ ++++ ++ Q + + ++ ++L I Sbjct: 99 SPVILDSTVVAVVNGNTVLAGDVFAPYARQMVKMREQLTDEQYLAAQRELLKRDLPGHIE 158 Query: 83 ETLKKQE---------IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 TL I+K D + + SA + L +G Sbjct: 159 RTLLSHALKSTLKQEQIDKLDGVLDQAFAEHVEKLLVKTETSSALELDKKLQSEGTSLAD 218 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 +Q Q + + + + +++ ++ + ++ + Q Sbjct: 219 IRQTFGTQQLAMQYLATESQVNVQLGRVDLLNYYRENLDRFSHPTRVKWQEIRVSITPQQ 278 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL--HPQFQNLLK 251 ++ ++ + + + +++ G + E L + L Sbjct: 279 DRRAAVMKLNEVVKKLQEGVAFPDVAREYSDGPTASQGGNWDWTKEDSLADVELNKELFS 338 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + T K I + ++ D L+ L + K + AE ++KL Sbjct: 339 LPTGAISRIIETDKYFRIIRVVEREDAHVTPFEKLQDGLREEIRSKKRHEKTAEVLRKLN 398 Query: 310 SNAIIH 315 A+I Sbjct: 399 ETAVIQ 404 >gi|134094945|ref|YP_001100020.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Herminiimonas arsenicoxydans] gi|133738848|emb|CAL61895.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Herminiimonas arsenicoxydans] Length = 258 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 87/307 (28%), Gaps = 53/307 (17%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI--TDGDISKRIALLKLQKING 70 + L + ++ +F + + +NG+ + + DI + + Q+ Sbjct: 1 MTLKPAHLLVALFVSAALPAMAQN------LAVVNGKPVPSSRADIMIKQMAAQGQQDTP 54 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 EL + +ELI + QE +K G+ ++ + Sbjct: 55 ELRAMVKEELINREILIQEADKLGLGTNAEVKSQV------------------------- 89 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + + +V + + + +EY R +L Sbjct: 90 -----EIARQSILIRALVADFLKKNPVKDADIKAEYDRFRAQASDKEYHARHIL------ 138 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250 ++ K K ++ + G + + F + + Sbjct: 139 -----VEKEEDAKAIIAKLKGGAKFEELAKQSKDPGSADNGGDLDWAAPAAFVKPFSDAM 193 Query: 251 KKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 Q P TQ G I + D R +I + Q +K + ++L Sbjct: 194 VSLQKGQLYDTPVKTQFGYHVIKLDDVR--AAKIPTLEEVKPQIAEGLQQKKLQAFQQQL 251 Query: 309 RSNAIIH 315 R+ A I Sbjct: 252 RAKAKIQ 258 >gi|319650163|ref|ZP_08004311.1| post-translocation molecular chaperone [Bacillus sp. 2_A_57_CT2] gi|317398145|gb|EFV78835.1| post-translocation molecular chaperone [Bacillus sp. 2_A_57_CT2] Length = 298 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 88/306 (28%), Gaps = 38/306 (12%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K + + + + S + T +G IT ++ + + + Sbjct: 3 KWMLSLSIAAGVIGLSACSSTGGESGDVVVETKSGN-ITKDELYEAMK--------EKYG 53 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A+QELI E + +N + + G + E Sbjct: 54 EQALQELIYEKVL-----SDKYEVTDEELNEKIDELKQQLGANFEMAL------MQYGYK 102 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 ++ L + + + E E+ K ++ Sbjct: 103 DEEDLRETFKTGLLQEKAAIKDIEATEKEVKEYYDNYKPEIKARHI-------------- 148 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 +K + ++ K + +++ + G + + P+F+ Sbjct: 149 -LVEDEKTADEVKKKLDEGGKFEDLATEYSKDPGSAANGGDLGWFGPGKMVPEFEEAAYA 207 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE-KHEAEYVKKLRS 310 N + P ++ G I + +K++ +K + Q +K++ + + + Sbjct: 208 LDVNEISAPVKSEHGFHIIQVTEKKEKKSFDEMKKEMEYQVKVSKLDGDKIQQAMDRELK 267 Query: 311 NAIIHY 316 A + Sbjct: 268 AADVDI 273 >gi|187933209|ref|YP_001887564.1| foldase protein PrsA [Clostridium botulinum B str. Eklund 17B] gi|187721362|gb|ACD22583.1| foldase protein PrsA [Clostridium botulinum B str. Eklund 17B] Length = 247 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 24/281 (8%), Positives = 74/281 (26%), Gaps = 39/281 (13%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 M +++ + G I D D+ + ++ + + L+ + + + + G Sbjct: 1 MENKVLAIVAGNEIKDKDLDTVLNRYPQERRAMFQGEQGREALLEQVVAFELMRNFGKEL 60 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + + + + N + Sbjct: 61 KIDETEEYKNLVEGLAKEAL---------------------------TQLAINKVLADVT 93 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + ++ ++ + + + + + Sbjct: 94 VTDEDVKKYYDDNSSMFINPPTVSAKHILVKTEEEATSIKEEIA---------NGLAFEE 144 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276 +K+++ G + + P+F+ + + + P TQ G I + DK Sbjct: 145 AAKKYSTCPSKEQGGSLGNFGKGSMVPEFEKVAFESEVGKVSEPVKTQFGYHLILVEDKT 204 Query: 277 DLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +K + Q + + E +K+L + Sbjct: 205 ESTTVPFDQVKDAVLKQLINERQQNKYLEMIKQLSDKYGVE 245 >gi|308172978|ref|YP_003919683.1| molecular chaperone lipoprotein [Bacillus amyloliquefaciens DSM 7] gi|307605842|emb|CBI42213.1| molecular chaperone lipoprotein [Bacillus amyloliquefaciens DSM 7] Length = 285 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 28/303 (9%), Positives = 84/303 (27%), Gaps = 42/303 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + I + + + + + +T G++ + Sbjct: 1 MKKIAIATITATSVLALSACSSGDNDVIAKTDAGNVTKGELYTNMK--------KTAGAS 52 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +L+ E + ++ + S D L + + + Sbjct: 53 VLTQLVQEKVLAKKYKVSDKEID--------------NKLKEYKTQLGDQYSALKQQYGE 98 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 YL Q + + + + + +K +++ Sbjct: 99 DYLKDQVKYELLAQKAAKDNIKVTDSDTKEYYDGLKGKIRASHIL--------------- 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQ 254 +K + E+ + K +++++ + G + + + F + Sbjct: 144 VADKKTADEVEKKLKKGEKFETLAKEYSTDSSKDNGGDLGWFDKKSMDETFSKAAFGLKV 203 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 ++P T+ G I ++R G +K L + K+ ++K+ A Sbjct: 204 GQVSDPVKTKFGYHIIKKTEER--GKYDDMKKELKEEVLKQKLNDNSAVQAAIQKVMKKA 261 Query: 313 IIH 315 + Sbjct: 262 DVK 264 >gi|156935006|ref|YP_001438922.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Cronobacter sakazakii ATCC BAA-894] gi|156533260|gb|ABU78086.1| hypothetical protein ESA_02857 [Cronobacter sakazakii ATCC BAA-894] Length = 625 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 42/397 (10%), Positives = 99/397 (24%), Gaps = 85/397 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + + +++ F + + +Y S+ +N + I+ + + Sbjct: 1 MMDNLRAAANHVVLKIILGLIILSFVLTGVSNYLIGGNSNY-AAKVNDQEISRAQLENAV 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + EL + A+Q LI E L Q + V Sbjct: 60 NIERNNLERRLGDRFSELASNEQYMAELRQRALQGLIDEALIDQYARSLHLNISDEQVRQ 119 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML------- 154 + + +++ + G+ + + Q L Q +V Sbjct: 120 SIFKNPAFQSDGKFDNARYNAIITSMGMSADQYAQALRNQLTTDQLVSAVMGSDFILPGE 179 Query: 155 --------------------------KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K E EI Q+ N R + Sbjct: 180 SDQFAALFAQQRQVRTATIAVDALAQKQQVSEQEIKDYYQQHTNNFQSPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 L + ++ + Sbjct: 240 AAALAENASEDEIQAYYDKHQDEFGQPQRNRYSLIQTKTEDEAKAILAQLKQGADFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ + I + G +L +F+N K + ++ + G + + D Sbjct: 300 KEKSVDVITARNGGDMGWLEPGTTPDEFKNAGLKEKGQLSDVIKSSVGFLIVRLDDITPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + +SA+ K +K+ A Sbjct: 360 TVKPLSEVHNDISAKVKQEKALDAFFALQRKVSDAAN 396 Score = 36.6 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 21/52 (40%) Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 Q V +A+ + R A K ++ + T E +K LR +A I Sbjct: 564 QGNVVLLALDEVRSGTMPDAQKKAMAQRLTQNNAEIAFDALLKGLRKDAKIK 615 >gi|295397248|ref|ZP_06807346.1| peptidyl-prolyl cis-trans isomerase [Aerococcus viridans ATCC 11563] gi|294974529|gb|EFG50258.1| peptidyl-prolyl cis-trans isomerase [Aerococcus viridans ATCC 11563] Length = 376 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 28/288 (9%), Positives = 69/288 (23%), Gaps = 31/288 (10%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K + ++ + + S T +G +T+ ++ + Sbjct: 5 KKFKLTSIALLSTVALAACSTGSSDGSSAVATGDGVEVTNEELQAELK--------STYG 56 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +Q+LI+E + E+ G E + Sbjct: 57 NTVLQKLIMEEVFVNEVGDDRAKELKEEATTEVETLIATYGGEDEFNTVLASS----GFS 112 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 ++ Q + ++ + EI +++ Sbjct: 113 DREDYEHQVYYYKLMSESVSKYIEVTDEEIQTAYDDYTPSFTVSHIL------------- 159 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESD--LHPQFQNLL 250 ++ KD ++ ++ + G + F Sbjct: 160 --VDDEETAKDLIAQLDDGADFAELAKENSTDTSSAKNGGSLGEVNADSGLDETFFAAAQ 217 Query: 251 KKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + ++ T P T G I + +K + G L K+ Sbjct: 218 ELAEGEYTTAPVETDYGYHIIKMDEKPEKGSLEDETEQLKESIVAEKL 265 >gi|168181007|ref|ZP_02615671.1| foldase protein PrsA [Clostridium botulinum NCTC 2916] gi|226950994|ref|YP_002806085.1| peptidylprolyl isomerase [Clostridium botulinum A2 str. Kyoto] gi|254783410|sp|C1FNE4|PRSA_CLOBJ RecName: Full=Foldase protein prsA; Flags: Precursor gi|182668154|gb|EDT80133.1| foldase protein PrsA [Clostridium botulinum NCTC 2916] gi|226843437|gb|ACO86103.1| prsA family protein [Clostridium botulinum A2 str. Kyoto] Length = 336 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 103/332 (31%), Gaps = 21/332 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 S + +L ++ F +V A + +NGE I D+ + ++ ++ Sbjct: 1 MKSAKKLLSVLCLGIFILTFTACDMVEKTPEAKAKSTIAKVNGEKIQRKDLDESPSMQQV 60 Query: 66 QKING------------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 E +K ++ LI E + Q+ ++ + +N Sbjct: 61 LSQIKTQYGEEFEKTEQGKEVIKEQKKQILENLITEKVLLQKGKELKVIPKDEELNKEAD 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + + ++ K+ L V++ + + + Sbjct: 121 KKVNEIKAVYNNDEKKFEETLKSTGFTKETLKEYLKDQIVIE-KVINEVTKDVKVEDKDA 179 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 QK N + + ++ ++ + +K K + + SK Sbjct: 180 QKYYNENQSMFTEKPNTMNVSHILVKTEDEAKKVKKRLDAKEDFAKVAKEVSQDTGSKDK 239 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALK 285 +G Y + + + +NP TQ G I I K++ + ++K Sbjct: 240 GGLLGDISYSDSNFDPTFMKAAIALKSGAISNPVHTQFGYHIIKINSKKEYPVKKFDSVK 299 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + Q K ++ + +++ + + I Y Sbjct: 300 EDIKKQLKQEKQQEAYTKKIEEWKKASKIKTY 331 >gi|312796419|ref|YP_004029341.1| peptidyl-prolyl cis-trans isomerase [Burkholderia rhizoxinica HKI 454] gi|312168194|emb|CBW75197.1| Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) [Burkholderia rhizoxinica HKI 454] Length = 638 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 33/274 (12%), Positives = 73/274 (26%), Gaps = 23/274 (8%) Query: 54 GDISKRIALLKLQKINGEL-EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR- 111 D+ + LL +Q + EL ++ +L L + + +R Sbjct: 134 YDVDQYKQLLAMQGMTPELFDERVRYQLASRQLPDGIQASAFAPKSLAQQLASLSEQSRE 193 Query: 112 ----------NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 + F + + + + E Sbjct: 194 VQGLMLRATDYADKVQPSDVQLKQYYDAHHDAFAMPERASVEYLMLSADALAQRAQPSEA 253 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 E+ +R I +Q K + AE ++ + K Sbjct: 254 ELKKYYDDHAAKFKTPGEVRASHILIAVAASASQAERDKARQKAESILAQVTAHPEQFAK 313 Query: 222 FASKIHD-----VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 A + D G + + F + K ++ ++ + G I + D Sbjct: 314 LAQQNSDDPGSKNKGGDLGFFGPGMMVKPFSDAAFKLKKDQISSIVQSDFGYHIIKVTDI 373 Query: 276 RD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + +KA ++ + K E+ YV++ Sbjct: 374 KPEQTKPFDEVKATIATEL---KAEQATKAYVEQ 404 >gi|197334554|ref|YP_002155561.1| peptidyl-prolyl cis-trans isomerase D [Vibrio fischeri MJ11] gi|197316044|gb|ACH65491.1| peptidyl-prolyl cis-trans isomerase D [Vibrio fischeri MJ11] Length = 618 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 31/402 (7%), Positives = 93/402 (23%), Gaps = 90/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ + + ++ F + SY + + IT + + Sbjct: 1 MMDRIREGSTGLAVKIILGLIIFSFVFAGVGSYL-VGGGQPLAAKVGEREITRNEFEQVY 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELI-----------------VETLKK 87 + + + + K + ++ + +++ Sbjct: 60 QNERNRMQSQLGEYFATLLGDPAYVEQFRKSVLDRMVNDALLDNQAQDLGLRISDDQIRQ 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK-------------------QG 128 + D + R G S++ F+++L + Sbjct: 120 TILSMPQFQKDGKFDEEIYNISLRRAGFSSDSFAAYLRQDLARNQLVMALESTEFTLSNE 179 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + + DF + EI K VR ++ + Sbjct: 180 VQAQAALETQQREIRTITLNTADFAKNAKVTDEEITEYYNANKQQFVRPEQVKVSYVELS 239 Query: 189 DNKLQNQGFV--------------------------------QKRIKDAEESRLRLPKDC 216 N L+ Q + + + + Sbjct: 240 GNSLKAQAPITDKEIEEYYQANLDKYSTQEKREVSHILIKGDEADAQKVLDRINNGEDFA 299 Query: 217 NKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK--SQNNTTNPYVTQKGVEYIAIC 273 + + G ++ + P+F++ + + + + G I + Sbjct: 300 TVAKDASQDIPTAKEGGSLGWIERGVIDPEFEDAAFQLAKVGDHSGIVKSAFGFHIIQLN 359 Query: 274 DKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + + A + + +L A Sbjct: 360 GIEEPTTKPLAEVSADIKSFLVDEHAADAFYSLQTELAEKAF 401 >gi|170756164|ref|YP_001783178.1| peptidylprolyl isomerase [Clostridium botulinum B1 str. Okra] gi|226712003|sp|B1IGZ5|PRSA_CLOBK RecName: Full=Foldase protein prsA; Flags: Precursor gi|169121376|gb|ACA45212.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum B1 str. Okra] Length = 336 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 103/332 (31%), Gaps = 21/332 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 S + +L ++ F +V A + +NGE I D+ + ++ ++ Sbjct: 1 MKSAKKLLSVLCLGIFILTFTACDMVEKTPEAKAKSTIAKVNGEKIQRKDLDESPSMQQV 60 Query: 66 QKING------------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 E +K ++ LI E + Q+ ++ + +N Sbjct: 61 LSQIKTQYGEEFEKSEQGKEVIKEQKKQILENLITEKVLLQKGKELKVIPKDEELNKEAD 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + + ++ K+ L V++ + + + Sbjct: 121 KKVNEIKAVYNNDEKKFEETLKSTGFTKETLKEYLKDQIVIE-KVINEVTKDVKVEDKDA 179 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 QK N + + ++ ++ + +K K + + SK Sbjct: 180 QKYYNENQSMFTEKPNTMNVSHILVKTEDEAKKVKKRLDAKEDFAKVAKEVSQDTGSKDK 239 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALK 285 +G Y + + + +NP TQ G I I K++ + ++K Sbjct: 240 GGLLGDISYSDSNFDPTFMKAAIALKSGAISNPVHTQFGYHIIKINSKKEYPVKKFDSVK 299 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + Q K ++ + +++ + + I Y Sbjct: 300 EDIKKQLKQEKQQEAYTKKIEEWKKASKIKTY 331 >gi|197104227|ref|YP_002129604.1| peptidyl-prolyl cis-trans isomerase family protein [Phenylobacterium zucineum HLK1] gi|196477647|gb|ACG77175.1| peptidyl-prolyl cis-trans isomerase family protein [Phenylobacterium zucineum HLK1] Length = 318 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 29/318 (9%), Positives = 76/318 (23%), Gaps = 61/318 (19%) Query: 14 KLLTTYFVLIIFCIVPIVSYK------SWAMSSRIRTTINGEVITDGDISKRIALLKL-- 65 K L T +++ ++G + D+ + L Sbjct: 5 KPLRTACLVLALAGTLAACGGNGDGDRPPERGDVAVARVDGRTVWASDVKREAVAQGLIG 64 Query: 66 ----QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 +L + + E++ + L E K + D Sbjct: 65 EGEPLDPASDLFRRVLDEVVDQKLLAAEALKRNLDEDPVAQRRL---------------- 108 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 + + ++++ + +Q+ E R Sbjct: 109 --------------AAARDRILGDMLIEDVVADAVTENNIRGLYAEQQRVAKRQEEIRAR 154 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 ++ + + + + + + + G Y Sbjct: 155 QIVLATEADAEAVKKLLAA-----------GASFEALAMERSRDPETRFNGGDLGYFTTD 203 Query: 241 DLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKI 297 + ++ P+ + GV + + D+R A + + T + Sbjct: 204 VMPEAYELALKTAKPGEIVGPFEVEGGVALVKVEDRRLEQPITLEAARPQIVRFLTYDR- 262 Query: 298 EKHEAEYVKKLRSNAIIH 315 + ++KLR A I Sbjct: 263 ---IRDLLEKLRGKAKIE 277 >gi|320103204|ref|YP_004178795.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Isosphaera pallida ATCC 43644] gi|319750486|gb|ADV62246.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Isosphaera pallida ATCC 43644] Length = 436 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 90/302 (29%), Gaps = 26/302 (8%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQK----------INGELEKIAVQELIVETLKK 87 S + + VIT G++ I Q ++EK+ + E I L Sbjct: 114 SDSTLAARVGDAVITRGELDHEIDRFAQQNGVSLATLTPEERLQVEKMVLNERIDRELIL 173 Query: 88 QEIEKSGITFDSNTVNYFFVQH-----------ARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 QE + T + F + + ++ +QG + + Sbjct: 174 QEARRVLKTPEQWAKISEFANQRWEAEEAPSLLREAGVETLVELKEWMKRQGRDLDQELE 233 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 ++ I + ++ + E+ A+ Q+ + RE + ++ + Sbjct: 234 DYRVKVITTEYLRMTLGPRLQVDLPEMLADYQQRREQFRREARLVWRELLADPARVGGRE 293 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 ++ E + + + G+ + E + L Sbjct: 294 AAAGLARNWLERLQHGEDFAHIARTESHGVTASDGGRWETTPEGYNRREVNQALAAMTPP 353 Query: 257 TTNP--YVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + P ++ GV I + + ++ L + K+++ +++LR Sbjct: 354 -SPPVLVESEDGVHVIQLESRTQAGFQPFSDVQDQLRERLFQAKLQQESRRLLERLRQTT 412 Query: 313 II 314 I Sbjct: 413 PI 414 >gi|225872709|ref|YP_002754166.1| peptidylprolyl cis-trans isomerase, putative [Acidobacterium capsulatum ATCC 51196] gi|225793467|gb|ACO33557.1| peptidylprolyl cis-trans isomerase, putative [Acidobacterium capsulatum ATCC 51196] Length = 660 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 27/241 (11%), Positives = 63/241 (26%), Gaps = 9/241 (3%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + KQ + G+ + + + ++ + Sbjct: 184 VSPEQVKQYYLQQGLKINFQYAVLDSNALRQTINPTDAQLQTYFKQNAGRYAKAIPETRS 243 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + EI ++ ++ I + V Sbjct: 244 IQYIAFQDSQIPGGAPQVTDAEIQQYYNAHQDQYKVPEEVKVRHILIQVPQGAPAATVAA 303 Query: 201 RIKDAEESRLRLPK-----DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 A+ +L + +K++ G+ ++ + P F + + Sbjct: 304 AKTKAQSVLDQLKQANGKNFAELAKKYSDDPGSKDQGGELGWVKQGMTVPAFDHAIFTMP 363 Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ TQ G I + DK E ++A + + T K A Y ++L Sbjct: 364 VGQISDLVRTQYGFHIIQVEDKHTAHTEALSDVRAQILSTLTQQKENDAAASYAQQLAKE 423 Query: 312 A 312 A Sbjct: 424 A 424 >gi|293392541|ref|ZP_06636861.1| peptidyl-prolyl cis-trans isomerase D [Serratia odorifera DSM 4582] gi|291424943|gb|EFE98152.1| peptidyl-prolyl cis-trans isomerase D [Serratia odorifera DSM 4582] Length = 627 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 36/399 (9%), Positives = 103/399 (25%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + +++ F + + +Y +NG+VI + + Sbjct: 1 MMDNLRAAANNVVLKIILALIILSFVLTGVGNYLIGGSGDY-AAKVNGQVIERAQLEQAF 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +L + A+ +LI L Q +K G++ + V Sbjct: 60 QSERSRMQQQLGEQFSALAGNEGYMQQLRQQALSQLIDNMLLDQYAKKLGLSISDDQVKD 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 N + + + G +++ Q + Q + V++ Sbjct: 120 AIRKAPYFQTNGQFDNAKYLDLITRMGYSADNYAQSMRQQLLNQQVIQAFGNSGFVLPSE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI- 187 K + E+ + KN + + + Sbjct: 180 SDAMAALVLQERDVRLATIDLNALQAKQNVSDDELKEYYNQNKNSFIAPEQVEVSYIPMD 239 Query: 188 ------------------------------PDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 N Q + K + + Sbjct: 240 AAAMQSKITVNDADISAYYDQHKSSYGQPERKNYSVIQLKTEAEAKAVLDELNKGADFAT 299 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ I + G+ +L + + + + + G + + D Sbjct: 300 LAKEKSTDIISKRNGGELGWLEPDTTADELKEAKLSEKGQLSGVVKSSVGYLIVRLNDVE 359 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ ++ + K +K+ A Sbjct: 360 PEKLKPLSEVRDSIADKVKQEKAVDAYYALQQKVSEAAT 398 >gi|59711407|ref|YP_204183.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Vibrio fischeri ES114] gi|59479508|gb|AAW85295.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Vibrio fischeri ES114] Length = 618 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 31/402 (7%), Positives = 93/402 (23%), Gaps = 90/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ + + ++ F + SY + + IT + + Sbjct: 1 MMDRIREGSTGLAVKIILGLIIFSFVFAGVGSYL-VGGGQPLAAKVGEREITRNEFEQVY 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELI-----------------VETLKK 87 + + + + K + ++ + +++ Sbjct: 60 QNERNRMQSQLGEYFATLLGDPAYVEQFRKSVLDRMVNDALLDNQAQDLGLRISDDQIRQ 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK-------------------QG 128 + D + R G S++ F+++L + Sbjct: 120 TILSMPQFQKDGKFDEEIYNISLRRAGFSSDSFAAYLRQDLARNQLVMALESTEFTLSNE 179 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + + DF + EI K VR ++ + Sbjct: 180 VQAQAALETQQREIRTITLNTADFAKNAKVTDEEITEYYNANKQQFVRPEQVKVSYVELS 239 Query: 189 DNKLQNQGFV--------------------------------QKRIKDAEESRLRLPKDC 216 N L+ Q + + + + Sbjct: 240 GNSLKAQAPITDKEIEEYYQANLDKYSTQEKREVSHILIKGDEADAQKVLDRINNGEDFA 299 Query: 217 NKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK--SQNNTTNPYVTQKGVEYIAIC 273 + + G ++ + P+F++ + + + + G I + Sbjct: 300 TVAKDASQDIPTAKEGGSLGWIERGVIDPEFEDAAFQLAKVGDHSGIVKSAFGFHIIQLN 359 Query: 274 DKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + + A + + +L A Sbjct: 360 GIEEPTTKPLAEVSADIKSFLVDEHAADAFYSLQTELAEKAF 401 >gi|258649206|ref|ZP_05736675.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella tannerae ATCC 51259] gi|260850471|gb|EEX70340.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella tannerae ATCC 51259] Length = 452 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 33/275 (12%), Positives = 77/275 (28%), Gaps = 13/275 (4%) Query: 20 FVLIIFCIVPIVSYKSW--AMSSRIRTTINGEVITDGDISKRIALLKLQKIN-GELEKIA 76 +LI+F + S + + + + I D+ + + + I Sbjct: 4 VILILFGCWALCSQAQRPRNVVDEVIWVVGDDPIYLSDVEQARLYAESEGQALENPYCII 63 Query: 77 VQELIVETLKKQEIEKSGITF---DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +++ ++ L + E IT D + S E + + K Sbjct: 64 PEQIAIQKLYLHQAEIDSITVSEGDIIRAADEIINRYIQNIGSKEGVEAVMHKSISQLRE 123 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + + K E+ + + ++ + + I Sbjct: 124 DFKRSQRDRMRIQREQQRITEKVAITPAEVREYFKNLPADSLPLIPTQVEVEIITAQPQP 183 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-----HDVSIGKAQYLLESDLHPQFQN 248 + V++ R+ + A + G+ Y+ L P+F N Sbjct: 184 TRAEVERIENKLRSFADRVNSGETEFSTLARFYSQDPGSSRNGGEMDYMGRGQLVPEFAN 243 Query: 249 LLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + + T+ G I + DKR + Sbjct: 244 VAFSLSDPKKVSKIVKTEFGYHIIQLVDKRGDKVK 278 >gi|317047179|ref|YP_004114827.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pantoea sp. At-9b] gi|316948796|gb|ADU68271.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pantoea sp. At-9b] Length = 622 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 35/396 (8%), Positives = 98/396 (24%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + + +++ F + + +Y S +NG I+ ++ + Sbjct: 1 MMDNLRAAGNHVVLKIILGLIILSFVLTGVGNYLIGGNSDY-AAKVNGHEISRAELDQAY 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + ++ ++ + A+ +LI + L Q I+ I + V Sbjct: 60 NTERNRQQQMLGDQFSQLASNEGYMQQMRQQALSQLIDQALLDQYIKDLHIGISDDQVKD 119 Query: 105 FFVQHAR---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 N ++ + G + + + L Q ++ Sbjct: 120 AIFNQQAFQTNGKFDNVKYNGLITSMGFTADQYAEALRKQLATQQLINAVANTDFMLKGE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K + EI Q+ +N + R + Sbjct: 180 TSKLVDLVAQQREIRQATIDVNALAAKQTVTDDEISQYYQQHQNSFMAPEQFRVSYIKMD 239 Query: 189 DNKLQNQGFVQKRIKDAEESR-----------------------------LRLPKDCNKL 219 LQ ++ + + Sbjct: 240 AASLQENASEADIQSWFDQHKADYSQPQRNRYSVIQTKTEADANAVLDALKKGEDFATLA 299 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 + + G +L + + +N + + + G + D + Sbjct: 300 KSKSIDPISARKGGDMGWLEPNTTPDELKNANLTEKGQLSGVIKSSVGFLIARLDDIQPE 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + ++ + K + +K+ A Sbjct: 360 QVKPLSEVHDAVADKVKQEKAVDAFYKMQQKVSEAA 395 >gi|153941271|ref|YP_001392892.1| peptidylprolyl isomerase [Clostridium botulinum F str. Langeland] gi|189037912|sp|A7GJD2|PRSA_CLOBL RecName: Full=Foldase protein prsA; Flags: Precursor gi|152937167|gb|ABS42665.1| foldase protein PrsA [Clostridium botulinum F str. Langeland] gi|295320869|gb|ADG01247.1| foldase protein PrsA [Clostridium botulinum F str. 230613] Length = 336 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 102/332 (30%), Gaps = 21/332 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 S + +L ++ F +V A + +NGE I D+ + + ++ Sbjct: 1 MKSAKKLLSVLCLGIFILTFTACDMVEKTPEAKAKSTIAKVNGEKIQRKDLDESPNMQQV 60 Query: 66 QKING------------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 E +K ++ LI E + Q+ ++ + +N Sbjct: 61 LSQIKTQYGEEFEKTEQGKEVIKEQKKQILENLITEKVLLQKGKELKVIPKDEELNKEAD 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + + ++ K+ L V++ + + + Sbjct: 121 KKVNEIKAVYNNDEKKFEETLKSTGFTKETLKEYLKDQIVIE-KVINEVTKDVKVEDKDA 179 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 QK N + + ++ ++ + +K K + + SK Sbjct: 180 QKYYNENQSMFTEKPNTMNVSHILVKTEDEAKKVKKRLDAKEDFAKVAKEVSQDTGSKEK 239 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALK 285 +G Y + + + +NP TQ G I I K++ + ++K Sbjct: 240 GGLLGDISYSDSNYDPTFMKAAIALKSGEISNPVHTQWGYHIIKINSKKEYPVKKFDSVK 299 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + Q K ++ + +++ + + I Y Sbjct: 300 EDIKKQLKQEKQQEAYTKKIEEWKKASKIKTY 331 >gi|28209982|ref|NP_780926.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium tetani E88] gi|28202417|gb|AAO34863.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium tetani E88] Length = 246 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 32/279 (11%), Positives = 83/279 (29%), Gaps = 39/279 (13%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 S++ NG ITDGD++ IA ++ + + L+ E + + I Sbjct: 2 SKVLAVFNGRKITDGDLNNTIAQFPAERQQFFKTEEGRKNLLNEIISFELIHDYAKDNKF 61 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + + + + + ++ + + + Sbjct: 62 DLDDLYLEKIEAIKKETLIQWTI---------------------------SKVLSEAEIK 94 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 E +I KN+ + E + T + + + + Sbjct: 95 EEDIKEFYNNNKNMFIEEERVSTKHILVETKEEAENIVDEIK---------NGLSFEEAA 145 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK--R 276 +++++ + G + +F+ + + +NP TQ G I + K + Sbjct: 146 KEYSNCPSKGAGGDLGTFGRGRMVKEFEEAAFEMKEGTISNPVKTQFGYHIIKLEKKYAK 205 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 +K + Q K ++ + L++ + Sbjct: 206 GTKEYNEVKDLIKKQLHQEKERDLYKKFTEDLKNKYSVE 244 >gi|83859697|ref|ZP_00953217.1| peptidyl-prolyl cis-trans isomerase family protein [Oceanicaulis alexandrii HTCC2633] gi|83852056|gb|EAP89910.1| peptidyl-prolyl cis-trans isomerase family protein [Oceanicaulis alexandrii HTCC2633] Length = 330 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 30/281 (10%), Positives = 70/281 (24%), Gaps = 51/281 (18%) Query: 39 SSRIRTTINGEVITDGDISKRIALL------KLQKINGELEKIAVQELIVETLKKQEIEK 92 S+I + +IT D+ + L + + ++ + + +LI + L E Sbjct: 54 QSQIAARVGETIITVDDVRREAVSLGLTETPQALMPSDQVFRDTLSDLIDQRLLALEAVA 113 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 + D + + +V+N Sbjct: 114 RDVQDDEEARLRL------------------------------AAAEERILGNILVENAI 143 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 + +E+ +Q E R +L ++ + Sbjct: 144 ASAVTDEAVELVYEEQSRLAPRTEEIRARHIL-----------VETREEADEVARLLAEG 192 Query: 213 PKDCNKLEKFASK-IHDVSIGKAQYLLE-SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 + + S G Y L Q + + P+ T+ G + Sbjct: 193 SDFGQLAAQVSRDLATRFSGGDLGYFTRTGILPGFAQVAFATDEGAVSAPFETEYGWHVL 252 Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + D+R + + + ++ LR Sbjct: 253 QVMDRRLQP--RESLEEVRPNIVRFLTLQGIDDLLEVLRER 291 >gi|203287575|ref|YP_002222590.1| basic membrane protein [Borrelia recurrentis A1] gi|201084795|gb|ACH94369.1| basic membrane protein [Borrelia recurrentis A1] Length = 336 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 105/331 (31%), Gaps = 37/331 (11%) Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKLQKI---NGEL 72 + ++FC++ I S+ + IN E+IT + ++ LK + + Sbjct: 4 FLCFLLFCVLGITSFAQ----NTPVVIINLHSNEIITKTEFDSKVNTLKKTQGRDLSNIE 59 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 +K +Q LI + L QE K GI + V L+ E ++ QG N Sbjct: 60 KKQVLQVLIADVLFGQEALKQGIKVADDEVMQTIRSQFGLASLTDEQIKQMIESQGTNWN 119 Query: 133 HFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + +V + F E E+ + K V + R Sbjct: 120 ELLASMKRSLAAQKLVLKIAQPKFSEIKAPSEKEVIEYYEANKTKFVNPDIARISHVFFS 179 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLH---- 243 + +++ A++ + + K+++ V G +L D Sbjct: 180 AKDKKRSEVLEQAKDIAKQIKSSKITFEEAVRKYSNDEGSKVKNGDLGFLARGDQSAQNV 239 Query: 244 ---PQFQNLLKKSQNNTTNPYVTQKGVEYIAIC-----------DKRDLGGEIALKAYLS 289 + + + N +NP +++G + + DK + +K + Sbjct: 240 LGADFIKEVFVLKKGNVSNPISSKEGFHIVKVTEMYSQKFLGLQDKISPNVNMTVKDAIK 299 Query: 290 AQNTPTKIEKHE----AEYVKKLRSNAIIHY 316 ++ E KL +A I Sbjct: 300 NNMINVHQQQIVAKIQQEIYDKLNKSASIQI 330 >gi|160898321|ref|YP_001563903.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Delftia acidovorans SPH-1] gi|160363905|gb|ABX35518.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Delftia acidovorans SPH-1] Length = 631 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 38/406 (9%), Positives = 101/406 (24%), Gaps = 102/406 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58 M + S F+ +L ++ F V + + + SS I ++G I D Sbjct: 1 MFESIR-KHSKFVMILLFLLIIPSFIFVGV-NQNYFTESSVIVARVDGHEIKQADWENAH 58 Query: 59 RIALLKLQKINGELEKIAVQE----------LIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 R+ +L+ N ++ + ++ + + ++K + + + Sbjct: 59 RMESDRLRAENPNIDPKLLDSPQARYATLEKMVRDQVLAAAVQKMHLAASDAQLVRTLQE 118 Query: 109 HAR-------NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + + AE + + + QG+ F+ L + V+ Sbjct: 119 IPAIAALKKPDGSMDAEAYRALVGSQGLTPEGFEANLRRELSMNQVMGGVTGTAFATDTQ 178 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTV----- 183 + K E ++ A + + + Sbjct: 179 VKQAIDALYQRREVQVARFEASAYASKVQPTEADLKAYYDAHTSQFQQSEQAKVEYLLLD 238 Query: 184 -----------------LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA--- 223 ++ +L + S+ + K + A Sbjct: 239 VPSIEAGITLSEDDVRSYYNQNAERLAGPEERRASHILINASKDAPAAEQEKAKAKAEEL 298 Query: 224 --------------------SKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYV 262 S G Y + F++ + ++ Sbjct: 299 LAELRKDPKRFAELAKANSQDGGSAASGGDLGYFGRGAMVKPFEDAAFGMKVGDISDVVH 358 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + G I++ D + + + + ++ +L Sbjct: 359 SDFGYHIISLVDIK--KPKAPSFEQMRPKLEAELKQQQAQRKFAEL 402 >gi|148381478|ref|YP_001256019.1| foldase protein PrsA [Clostridium botulinum A str. ATCC 3502] gi|153933333|ref|YP_001385853.1| peptidylprolyl isomerase [Clostridium botulinum A str. ATCC 19397] gi|153935960|ref|YP_001389260.1| peptidylprolyl isomerase [Clostridium botulinum A str. Hall] gi|226712001|sp|A7FPK5|PRSA_CLOB1 RecName: Full=Foldase protein prsA; Flags: Precursor gi|226712002|sp|A5I7R3|PRSA_CLOBH RecName: Full=Foldase protein prsA; Flags: Precursor gi|148290962|emb|CAL85098.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum A str. ATCC 3502] gi|152929377|gb|ABS34877.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum A str. ATCC 19397] gi|152931874|gb|ABS37373.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum A str. Hall] Length = 336 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 40/332 (12%), Positives = 105/332 (31%), Gaps = 21/332 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 S + +L ++ F +V A + +NGE I D+ + ++ ++ Sbjct: 1 MKSAKKLLSVLCLGIFILTFTACDMVEKTPEAKAKSTIAKVNGEKIQRKDLDESPSMQQV 60 Query: 66 QKING------------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 E +K ++ LI E + Q+ ++ + +N Sbjct: 61 LSQIKTQYGEEFEKSEQGKEVIKEQKKQILENLITEKVLLQKGKELKVIPKDEELNKEAD 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + + + + + F + + + +V + + + Sbjct: 121 KKVNEIKAVYNNDEKKFE-ETLKSTGFTKETLKEYLRDQIVIEKVINEVTKDVKVEDKDA 179 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 QK N + + ++ ++ + +K K + + SK Sbjct: 180 QKYYNENQSMFTEKPNTMNVSHILVKTEDEAKKVKKRLDAKEDFAKVAKEVSQDPGSKDK 239 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALK 285 +G Y + + + + +NP TQ G I + K++ + ++K Sbjct: 240 GGLLGDISYSDSNYDPTFMKAAIALKEGTISNPVHTQWGYHIIKVNSKKEYPVKKFDSVK 299 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + Q K ++ + +++ + + I Y Sbjct: 300 EDIKKQLKQEKQQEAYTKKIEEWKKASKIKTY 331 >gi|254785729|ref|YP_003073158.1| peptidyl-prolyl cis-trans isomerase [Teredinibacter turnerae T7901] gi|237683903|gb|ACR11167.1| putative PPIC-type PPIASE domain protein, peptidyl-prolyl cis-trans isomerase [Teredinibacter turnerae T7901] Length = 624 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 47/395 (11%), Positives = 111/395 (28%), Gaps = 87/395 (22%) Query: 1 MTSKVFTSLSDFI-KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR 59 M V +L I ++ F ++ I + S +++ ++G IT ++S+ Sbjct: 3 MLQSVRDNLKGTIVSVIVILFFILPMVITGVGSSFLGSVAGTDAAVVDGRSITKKELSRE 62 Query: 60 IALLKLQ-------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 I + K + + L + ++ L + EK G+ ++N Sbjct: 63 IYMQKQRLLAQQGVDPSADYLKDENLAQPVLERLTRKAAVLAAAEKGGMAVSEKSINGAI 122 Query: 107 ---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN------------- 150 + + S++ + S L + G+ +K A + + + K Sbjct: 123 VGQEEFKVDGKFSSQQYRSLLARVGLTPAAYKAATAEEMMLGQLNKGLELSSFVTEKEKS 182 Query: 151 --------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 D + EI A Q + + + N Sbjct: 183 EIIAIINEKRSFFTVKIPADDLADSIEVTDAEIAAYYQANEAEFREPEKLSVDYIELSVN 242 Query: 191 KLQNQGFVQKRI---------------------------------KDAEESRLRLPKDCN 217 + V + + + + + Sbjct: 243 SIAATVTVDEADVRSQYEQEAESFDATPELTVAHILLEEDSSAKLTEVQAKLAAGDEFAD 302 Query: 218 KLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDK 275 + ++ G+ L+ F++ ++ + + P T G +I + K Sbjct: 303 VAKAYSDDAGSRDQGGELGVLVAGAFPEAFESAARELGEGEVSGPVKTDSGTHFIKVLKK 362 Query: 276 R--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++ + KA + K E ++KL Sbjct: 363 DVPEVPSFESRKAAIERSLKVAKAEGIYLSEMEKL 397 >gi|154685453|ref|YP_001420614.1| hypothetical protein RBAM_010190 [Bacillus amyloliquefaciens FZB42] gi|154351304|gb|ABS73383.1| PrsA [Bacillus amyloliquefaciens FZB42] Length = 283 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 27/303 (8%), Positives = 86/303 (28%), Gaps = 42/303 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + I + + + + + +T G++ + Sbjct: 1 MKKIAIAAITATSVLALSACSSGDNDVIAKTDAGNVTKGELYTNMK--------KTAGAS 52 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +L+ E + ++ + + D+ Y + + L + +L Sbjct: 53 VLTQLVQEKVLAKKYKVTDKEIDTKLKEYKTQLGDQYSSLKQQYGEDYL----------- 101 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 Q + + + + + +K +++ Sbjct: 102 ---KDQVKYELLAQKAAKDNIKVTDSDTKEYYDGLKGKIRASHIL--------------- 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQ 254 +K + E+ + K +++++ + G + + + F + Sbjct: 144 VADKKTADEVEKKLKKGEKFETLAKEYSTDSSKDNGGDLGWFDKKSMDETFSKAAFGLKV 203 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 ++P T+ G I ++R G +K L + K+ ++K+ A Sbjct: 204 GQVSDPVKTKFGYHIIKKTEER--GKYDDMKKELKEEVLKQKLNDNSAVQAAIQKVMKKA 261 Query: 313 IIH 315 + Sbjct: 262 DVK 264 >gi|114570817|ref|YP_757497.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Maricaulis maris MCS10] gi|114341279|gb|ABI66559.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Maricaulis maris MCS10] Length = 317 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 29/326 (8%), Positives = 71/326 (21%), Gaps = 66/326 (20%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSR---------------IRTTINGEVITDGDIS 57 + + + +L++ + + + + +I D+ Sbjct: 1 MSVFRVFCILVLTATGTACGPEPRRTADDFESGQPVLSLDEVDPVVARVERTMIRRSDVE 60 Query: 58 KRI------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 + + + ++ELI + L E + G+ Sbjct: 61 REALAQDGEEASPVPAMGSAEFDRVLEELIDQRLLALEARRRGLHQSEEARRRL------ 114 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 + + +V+ + ++ +Q Sbjct: 115 ------------------------ALAEERILGNVLVETVIDDAVTDETIQRIYEEQVRL 150 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVS 230 E R +L Q+ + + + + Sbjct: 151 IPLGEEVRARHIL-----------VQTQEEAVAIKALIDQGRDFAELAVAMSEDQATRLE 199 Query: 231 IGKAQYLL-ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 G Y E L + + P+ T+ G + + D+R L Sbjct: 200 GGDLGYFSREGILPAFGAVAFATPEGAVSEPFRTEFGWHLLTVVDRRRQPP--PSLESLR 257 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIH 315 + LR A I Sbjct: 258 PNIARFYTFDQLEALIDGLRDQAEIE 283 >gi|148264478|ref|YP_001231184.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter uraniireducens Rf4] gi|146397978|gb|ABQ26611.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter uraniireducens Rf4] Length = 299 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 33/310 (10%), Positives = 74/310 (23%), Gaps = 43/310 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL-----LKLQKING 70 + +L I + + + + + V+ + D+ + ++ LK + + Sbjct: 1 MFRNLLLGITISILLAGPALAEEVNPVIGRVGDFVLREADLERLLSYQSPEALKKLQDDP 60 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 V++L++ K G Sbjct: 61 AQRAEIVRQLLLTKAVAARSRKEGFDKKPEVKEEL------------------------- 95 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 Y+ + ++ E E+ + + + R Sbjct: 96 -----GYVIDNYLADQYLRKVVTADVAIPEEELKKYYAEHEKDFLISQSARVRHIYFEAA 150 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLE----KFASKIHDVSIGKAQYLLESDLH--P 244 K +K AE +L + + G L + Sbjct: 151 KDATPEVKEKAKAKAEAILKQLKEGADFAAVARASSEDADSASKGGDLGVLSPGKTNSKE 210 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEA 302 + T+ T G I + ++ D K Y+ +K Sbjct: 211 FEKAAFALKAGETSPVVETPFGYHIIRVDERTDQRTASFDEAKDYIRTTLKGQFEQKKAR 270 Query: 303 EYVKKLRSNA 312 E++ KL A Sbjct: 271 EFLDKLAKEA 280 >gi|253567245|ref|ZP_04844695.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_2_5] gi|251944076|gb|EES84595.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_2_5] Length = 456 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 97/313 (30%), Gaps = 17/313 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQ 66 + F+ + + + + SY + + I E I D+ + AL + + Sbjct: 1 MKKFVN-FKFVVMFALALVANVASYAQDNVIDEVVWVIGDEAILKSDVEEARLAALYEGR 59 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 K +G+ + +EL V+ L + I V N + + Sbjct: 60 KFDGDPYCVIPEELAVQKLYMHQAVLDSIEVPEAEVIQRVDYQINNYIQAMGTREKLEEY 119 Query: 127 QGIGDNHFKQYLAIQS---IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 ++ + + + ++ + E+ +++ ++ + Sbjct: 120 FNKTSTQIREAMRENARDGLIVQRMQQKLVGDIKVTPAEVRRYFKELPQDSIPYVPTQVE 179 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLL 238 + I ++ + E R+ K + A + + G+ ++ Sbjct: 180 VQIITQQPKIPVAEIEDVKRRLREYTDRINKGESDFSTLALLYSEDRGSAIKGGETGFMG 239 Query: 239 ESDLHPQFQNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT-PT 295 + + P++ N+ Q+ + ++ G I + +KR G+ ++ + Sbjct: 240 KGQMVPEYANVAFNLQDTKKISKIVESEYGFHIIQLIEKR---GDRINTRHILLKPKVSD 296 Query: 296 KIEKHEAEYVKKL 308 K + + Sbjct: 297 KELDEANARLDSI 309 >gi|300728335|ref|ZP_07061700.1| peptidyl-prolyl cis-trans isomerase family protein [Prevotella bryantii B14] gi|299774400|gb|EFI71027.1| peptidyl-prolyl cis-trans isomerase family protein [Prevotella bryantii B14] Length = 486 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 26/252 (10%), Positives = 73/252 (28%), Gaps = 12/252 (4%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQEIEKSG 94 ++ + + E I D+ + + K G+ + ++L ++ L + Sbjct: 59 SIIDEVIWVVGDEPILKSDVEMMRMQGEAEGVKFQGDPDCSIPEQLAIQKLFLHQAAIDS 118 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND--- 151 I + V+ + + + +Q + +++ + Sbjct: 119 IEVTESEVSQGIDDQINYWIQLIGSREKLEEYRKMTITQIRQQMHDDFKNQQLIRKEREE 178 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + ++ A + + ++ + I ++ ++ + + R Sbjct: 179 LVKDIKVTPAQVRAYFKNLPEDSIPFVPTEVEVQVITRQPKISKDETERIKEQLRDFTKR 238 Query: 212 LPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKKSQN--NTTNPYVTQ 264 + A G+ Y+ L P F N+ + + T+ Sbjct: 239 VNDGETSFSTLARLYSEDPGSARQGGELGYIGRGMLDPAFANVAFNLTDPKKISKIVETE 298 Query: 265 KGVEYIAICDKR 276 G I + DKR Sbjct: 299 FGFHIIQLIDKR 310 >gi|300779152|ref|ZP_07089010.1| peptidyl-prolyl cis-trans isomerase [Chryseobacterium gleum ATCC 35910] gi|300504662|gb|EFK35802.1| peptidyl-prolyl cis-trans isomerase [Chryseobacterium gleum ATCC 35910] Length = 455 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 98/310 (31%), Gaps = 16/310 (5%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMS-----SRIRTTINGEVITDGDISKRIALLKLQKI 68 L F+L IF ++ + + + I I E++ + D+ +++ K Q Sbjct: 3 NKLKITFLLGIFIMIFSSNMMNAQLKQGDLVDGIAAVIGDEIVLESDVIEQMNYGKQQGA 62 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDS-----NTVNYFFVQHARNTGLSAEDFSSF 123 + ++ LI L E +K + + N + Q +++ Sbjct: 63 ANTDKCEFLENLISNKLLVYEAKKDTLIENRSAAIKEQANAKYRQLLSQFPDEKTLLAAY 122 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV--REYLIR 181 + + + + + K E+ K ++ + Sbjct: 123 KFRNAYEMKNAIEKIDTDQYYGQAKYQRVTDKADVTPNEVTDFYNMYKTQLPQVKDEVTL 182 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 + P ++ + R+K ++ L ++ ++ + G + + + Sbjct: 183 AQIMIYPSLTEAHKQDLINRLKKIKQDILAGETFESQARIYSEDEGSAANGGLYKNINKG 242 Query: 241 DLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 + F+ +N ++P ++ G I + KR A L A T +I K Sbjct: 243 QMVKPFEAAALNLQENEISDPVESEFGFHIIQLV-KRSGKVYDARHILLKATPTDEEI-K 300 Query: 300 HEAEYVKKLR 309 + +R Sbjct: 301 TAKAKLDSIR 310 >gi|319763570|ref|YP_004127507.1| ppic-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus denitrificans BC] gi|330824229|ref|YP_004387532.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus denitrificans K601] gi|317118131|gb|ADV00620.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus denitrificans BC] gi|329309601|gb|AEB84016.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus denitrificans K601] Length = 640 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 36/405 (8%), Positives = 96/405 (23%), Gaps = 102/405 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58 M + + LL ++ F +V I + S + ++G+ IT D Sbjct: 1 MLESIRKHTKWVMGLLFL-LIIPSFILVGID-RNYFGGGSPVVARVDGKDITQADWDNAH 58 Query: 59 RIALLKLQKI----------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 R+ +++ + + ++ L+ + + + +K + + Sbjct: 59 RMESDRIRAQSPGIDAKLLDSPQARYATLERLVRDRVLQVAAQKMHMLTSDARLARELQS 118 Query: 109 HAR-------NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + + L AE + + QG+ + + V+ + Sbjct: 119 IPQIAALKRPDGTLDAEAYRALAGAQGLTPEGLEARVRHDISVSQVMGSVVASAFAGPAE 178 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVR------------ 176 F+ K + ++ A + + Sbjct: 179 SKLALDALFQRREIQVARFDPSAFVSKVAVTDADLEAYYKAHLAKFQQPEQATVEYVVLD 238 Query: 177 -----------------EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK- 218 Y S + + + V R + + Sbjct: 239 LDAVKAGITLNEDDLRTYYKENLSRLSGKEERRASHILVNAAKDAPAAEREKAKAKAQEL 298 Query: 219 ----------LEKFASKIHDVSI-----GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYV 262 + A K + G + + F++ + + ++ Sbjct: 299 LAEVRKAPGRFAEIARKESQDTGSAASGGDLGFFGHGAMVKPFEDAVFSLKKGEISDVVE 358 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 T G I + D + L ++ + Sbjct: 359 TDFGYHVIMLTDVK--TPRQPSFEELRPSLEAELRQQQAQRKFAE 401 >gi|94967188|ref|YP_589236.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Koribacter versatilis Ellin345] gi|94549238|gb|ABF39162.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Koribacter versatilis Ellin345] Length = 317 Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 100/306 (32%), Gaps = 34/306 (11%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIA-------VQELIVETLKKQEIEKSGIT 96 +NG IT ++ K ++ A ++ELI + Q EK G+ Sbjct: 2 ARVNGHKITRPEVEKYYKNQIAGSPQQPSDEQADNLRLNILRELINNEILMQRAEKLGLL 61 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 V+ +A S E F + L ++GI + F++ L V+ + K Sbjct: 62 ATDEEVDSKV--NAAKAPYSQEQFDARLKERGITMDDFRRDLRRSITIDKVINKEITSKI 119 Query: 157 GNLEMEIPANKQKMKNIT---VREYLIRTVLFSIPDNKL-------QNQGFVQKRIKDAE 206 + +I + K +Y + +L + N N +K+I+ Sbjct: 120 NVSDGDISSYYNAHKAEFNLIEPQYHMAQILVTPQPNPQVKNLQKANNDAEAKKKIQQLV 179 Query: 207 ESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQ---FQNLLKKSQNNTTN--P 260 + ++ + + G ++ ES L F + + T P Sbjct: 180 NRLDSGEDFASVAMNYSEQPEISPNGGDLGFIPESSLKGDKLAFDAVARLKPGQYTGVLP 239 Query: 261 YVTQK-----GVEYIAICDKRDLG----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 V G + + K G + ++ + Q + + +A Y + +R Sbjct: 240 IVDPSNKQVLGYRILKLIAKESSGQRELNDPRVQQAIREQLRDGREQLLKAAYYESVRDK 299 Query: 312 AIIHYY 317 + + Y Sbjct: 300 SSVENY 305 >gi|71908519|ref|YP_286106.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dechloromonas aromatica RCB] gi|71848140|gb|AAZ47636.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dechloromonas aromatica RCB] Length = 263 Score = 86.7 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 83/299 (27%), Gaps = 47/299 (15%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--ELEKIAV 77 ++ + + A ++ T+NG+ I+ + IA + Q EL+ Sbjct: 7 LAALLVAGAIVSAPALAADKAKAFATVNGQPISQTVYNAFIAEQQAQGAPDSPELQGAVK 66 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 +EL+ + QE +K G+ N + Sbjct: 67 EELVRREILAQEAKKKGLDKAPNVQGQI------------------------------EL 96 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 + + + + + N+ EY R VL D+ Sbjct: 97 AKQAVLIRAYLSDYVKAHPISDAQLKAEYELIKNNLGSTEYKARHVLVEKEDDAKAIIAK 156 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 + K K ++ G+ + + F + L K + Sbjct: 157 LDK-----------GEKFSELAKQSKDPGSKDKGGELGWSSPNAYVKPFGEALGKLKKGE 205 Query: 257 TTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T P + G I + D R + + Q ++ VK+LR A + Sbjct: 206 YTKTPVKSDFGYHVIQLDDSRPMTP--PPFDQVKPQLQQRAGQQQVENLVKELRGKAKV 262 >gi|196037443|ref|ZP_03104754.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus NVH0597-99] gi|196031685|gb|EDX70281.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus NVH0597-99] Length = 285 Score = 86.7 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 80/304 (26%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + +++ SS T IT D K+ LK + L ++ Sbjct: 4 KHIFIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQ---LKDRYGKDMLYEMM 60 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 Q++I + K + V + G F + Sbjct: 61 AQDVITKKYK----------VSDDDVEKEVQKVKNQYG------DQFTAVLENNRLKDEA 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKKQIKFKLAMNEAIKKSVTEKDVKA--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLKV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK++L +K + +I + ++K A Sbjct: 205 GQISNPVKSPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERIADPTFSHKLLQKELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|148880128|sp|Q68WG0|PLP_RICTY RecName: Full=Parvulin-like PPIase; AltName: Full=Peptidyl-prolyl cis-trans isomerase plp; AltName: Full=Rotamase plp; Flags: Precursor Length = 282 Score = 86.7 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 82/301 (27%), Gaps = 38/301 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + +IF V ++S ++ ++ T G + + I + + ++ Sbjct: 4 LSVIFLSVSMLSSIAFCDQDKVVATYKGGEVKESQIMQEFKPQLNLQSGETIKN------ 57 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 ++ N L E+ + + Sbjct: 58 --------------FDDFPLQDQEKLIKIYVNNLLLKEEVAKSSITSSKEFQEKLENAKN 103 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +++ N + + NK + + +L QK Sbjct: 104 QLAQQELLANYIKSNITDKMFDDEYNKYVDNLKGKEQIKVAHIL-----------VKSQK 152 Query: 201 RIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL---LESDLHPQFQNLLKK-SQN 255 + + E+F+ K + G Y+ L P+F+N N Sbjct: 153 EANTVKTKLSKGGNFNKLAEEFSLDKATASNGGVIGYIILNQSGQLVPEFENKAFALKVN 212 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + +K+ + I K + +Y+ L + A + Sbjct: 213 EVSTPVKTDFGWHIIKVLEKKPVP--IPTKKEAKVTIDNILAAEILKKYISDLEAKADLK 270 Query: 316 Y 316 Sbjct: 271 I 271 >gi|296117344|ref|ZP_06835934.1| peptidylprolyl isomerase [Gluconacetobacter hansenii ATCC 23769] gi|295976110|gb|EFG82898.1| peptidylprolyl isomerase [Gluconacetobacter hansenii ATCC 23769] Length = 308 Score = 86.3 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 33/276 (11%), Positives = 82/276 (29%), Gaps = 50/276 (18%) Query: 43 RTTINGEVITDGDISKRIALLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGITFDS 99 ++NG+ I DI + IA + Q + I + +L+ + + EKSG+ Sbjct: 50 LASVNGQDIRLNDIRQAIATMPDQLRKLPENVIIPILLNQLVDQKAIQIVAEKSGLAKQP 109 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + + + A ++ + + + Sbjct: 110 DVQHQ------------------------------MEVAAQNALQNAYLSSQVTPGLTDD 139 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 ++ +K E R +L +++ D + + Sbjct: 140 AVKAYYDKNYANKPGAEEIHARHILVP-----------TEEQANDIIKQLKGGANFADLA 188 Query: 220 EKFASKIH--DVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 K + + G + + D+ + N+ + P TQ G I + K Sbjct: 189 TKLSKDPGSAKQNGGDLGWFKKGDMLPAFWDAASTLQPNSFSQTPVHTQYGWHVIQVLGK 248 Query: 276 RDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 R +++ + + ++K + V +++ Sbjct: 249 RTAATPTLDSMRDQIRQKLIQEGVQKAVSSAVGQVK 284 >gi|114768927|ref|ZP_01446553.1| Probable PpiC-type peptidyl-prolyl cis-trans isomerase [alpha proteobacterium HTCC2255] gi|114549844|gb|EAU52725.1| Probable PpiC-type peptidyl-prolyl cis-trans isomerase [alpha proteobacterium HTCC2255] Length = 297 Score = 86.3 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 116/305 (38%), Gaps = 11/305 (3%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 FIK++T +L F + + ++ +N ++IT+ +IS+RI +L++ Sbjct: 3 FIKIMTAILLLSPF-----TAMAQSTNTFKVAVEVNDQIITNYEISQRIKMLEIFGAKSV 57 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 +K + LI E L + G +++ ++ A+ L+ +D ++LD + + Sbjct: 58 SKKEVINSLINERLYTYSANELGALPNNSEIDKGLDDFAKRGNLNKKDLLAYLDTRNVSQ 117 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 Y+ V++ F+ + ++ + ++ + I + N Sbjct: 118 ETLLAYITSGLTQRKVIQKKFVNNIIISQSDVASAIDLEGLLSKDNFNIVEYIEIKFLNL 177 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 L + K+ + ++ +C L+ K ++S+ +DL N L Sbjct: 178 LSD-----KKSLKYLNTINKMVDNCLDLQSEVKKYENISL-IVHKKRSNDLQKNILNELN 231 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 N T K Y+ + R+ + L + +I K Y++KL+ Sbjct: 232 NLDINETKVVKNLKNEHYLLMLCSRNSEMDKNTIETLRNKIFNNRINKIGKAYIQKLKGE 291 Query: 312 AIIHY 316 A + Sbjct: 292 AFVDI 296 >gi|16759432|ref|NP_455049.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142796|ref|NP_806138.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213160790|ref|ZP_03346500.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425852|ref|ZP_03358602.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213646001|ref|ZP_03376054.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213850134|ref|ZP_03381032.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289829271|ref|ZP_06546883.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25320965|pir||AG0558 peptidylprolyl isomerase (EC 5.2.1.8) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501723|emb|CAD08911.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Typhi] gi|29138428|gb|AAO69998.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 623 Score = 86.3 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 39/396 (9%), Positives = 102/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S+ +NG+ I+ Sbjct: 1 MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYL-IGGSNNYAAKVNGQEISRAQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 +++ +++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYTQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K + E+ + + K + R + Sbjct: 180 TDELAALVSQQRVVREAVIDVNALAAKQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + + Sbjct: 240 AATMQAPVSDADIQAYYDQHVDQFTQPERIRYSIIQTKTEDDAKAVLDALNKGEDFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ES P+ +N K + + + G + D + Sbjct: 300 KEKSTDIISARNGGDMGWLEESATVPELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|203284033|ref|YP_002221773.1| basic membrane protein [Borrelia duttonii Ly] gi|201083476|gb|ACH93067.1| basic membrane protein [Borrelia duttonii Ly] Length = 336 Score = 86.3 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 105/331 (31%), Gaps = 37/331 (11%) Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKLQKI---NGEL 72 + ++FC++ I S+ + IN E+IT + ++ LK + + Sbjct: 4 FLCFLLFCVLGITSFAQ----NTPVVIINLHSNEIITKTEFESKVNTLKKTQGRDLSNIE 59 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 +K +Q LI + L QE K GI + V L+ E ++ QG N Sbjct: 60 KKQVLQVLIADVLFGQEALKQGIKVADDEVMQTIRSQFGLASLTDEQIKQMIESQGTNWN 119 Query: 133 HFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + +V + F E E+ + K V + R Sbjct: 120 ELLASMKRSLAAQKLVLKIAQPKFSEIKAPSEKEVIEYYEANKTKFVNPDIARISHVFFS 179 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLH---- 243 + +++ A++ + + K+++ V G +L D Sbjct: 180 AKDKKRSEVLEQAKDIAKQIKSSKITFEEAVRKYSNDEGSKVKNGDLGFLARGDQSAQNV 239 Query: 244 ---PQFQNLLKKSQNNTTNPYVTQKGVEYIAIC-----------DKRDLGGEIALKAYLS 289 + + + N +NP +++G + + DK + +K + Sbjct: 240 LGADFIKEVFVLKKGNVSNPISSKEGFHIVKVTEMYSQKFLGLQDKISPNVNMTVKDAIK 299 Query: 290 AQNTPTKIEKHE----AEYVKKLRSNAIIHY 316 ++ E KL +A I Sbjct: 300 NNMINVHQQQIVAKIQQEIYDKLNKSASIQI 330 >gi|312888862|ref|ZP_07748425.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mucilaginibacter paludis DSM 18603] gi|311298737|gb|EFQ75843.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mucilaginibacter paludis DSM 18603] Length = 457 Score = 86.3 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 83/291 (28%), Gaps = 21/291 (7%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIE 91 +I + +I DI + A +Q ++ + +Q+L+ + L Q+ Sbjct: 20 AQKKTLDKIAGVVGSGIILQSDIESQYAQYLIQGNPPNPSIKCLILQQLLTQKLLAQQAV 79 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV---V 148 + + V+ + R+ A G +K L V + Sbjct: 80 IDSVFVKDDEVDAEVDRRMRSMVQRAGGEERLEQFLGRSIIQYKDELRPDIKEQRVAEKM 139 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + K +I + ++ Y + I ++ AE Sbjct: 140 RQKITEKVNVTPFDIKKYFDAIPKDSLPTYNKEVEVGEISITPKLTAEEKKQFKDKAESL 199 Query: 209 RLR---LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 R R N ++ G + S +F + K + + T Sbjct: 200 RARVKGGEDFGNLARLYSQDPGSSPDGGDLGFADRSTFVKEFAAMAFKLKAGEISPVFET 259 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 G ++ + ++R ++ T++ + + R+ I Sbjct: 260 DFGFHFLQVIERRGEQV------HVRHILIKTEVSQGSLD-----RAKVKI 299 Score = 38.9 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 77/302 (25%), Gaps = 23/302 (7%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94 + M +I +N +T DI K + + +++ V E+ + E +K Sbjct: 136 AEKMRQKITEKVN---VTPFDIKKYFDAIPKDSLPTYNKEVEVGEISITPKLTAEEKKQF 192 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 + G + ++ K Sbjct: 193 KDKAESLRARVKGGEDFGNLARLYSQDPGSSPDGGDLGFADRSTFVKEFAAMAFKLKAGE 252 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 E + + ++ + +R +L ++ K Sbjct: 253 ISPVFETDFGFHFLQVIERRGEQVHVRHILIKTEVSQGSLDRAKVKIDSVYTLLSGNKKI 312 Query: 215 DCNKLEKFASKI--HDVSIGKA----------QYLLESDLHPQFQ-NLLKKSQNNTTNP- 260 D + + S + G Y+ L PQ + + P Sbjct: 313 DFSSAAAYYSDDRDTKYNGGMMLNADNVQSRTTYIPTDKLDPQVALVVDTMKIGEISKPA 372 Query: 261 -YVTQKG---VEYIAICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + Q G + + + K D + + K+ K +E+ +K R + + Sbjct: 373 LFTAQDGKKTYKILLLKSKTDAHKANLAQDLPKIKDLAYEDKLNKSVSEWFEKKRKDTYV 432 Query: 315 HY 316 Sbjct: 433 KI 434 >gi|241663130|ref|YP_002981490.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii 12D] gi|240865157|gb|ACS62818.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii 12D] Length = 646 Score = 86.3 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 48/408 (11%), Positives = 106/408 (25%), Gaps = 103/408 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M V T + L+ V F + SY S+ SS ++G+VI+ ++ R+ Sbjct: 1 MLDFVRTH-RRLMFLVLLILVFPSFVFFGVQSYSSFMDSSHDAAKVDGKVISTNEVDARV 59 Query: 61 -------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 Q ++ + + +I + + E+ ++ +T + + + Sbjct: 60 REQTERLRQMLGAQYDPRQFEGPQMRRDVLDGIIQQRVLANEVTRANLTISNEKIRDTIL 119 Query: 108 Q-------HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------- 149 Q + E + L Q + + L + + + Sbjct: 120 QIPAVAALRKPDGSFDQEAYVRLLSAQNMTPEQLEGNLRFELSQQQIPQSIVSSAFVPKS 179 Query: 150 ----------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 D+ K + I A + ++ Sbjct: 180 LVDRLIQVRDQQREVQALLFKPADYAAKVNADDKAIQAYYDAHQQEFSVPEQVKAEYVVF 239 Query: 188 PDNKLQNQG----FVQKRIKDAEESRLRLPKDCNKL------------------------ 219 ++ Q K D +R + ++ Sbjct: 240 SGEEMMKQIPVTPEQIKEYYDQNAARFKTQEERRAAHILIKLPDNAKPADKEAAKKKAEE 299 Query: 220 ------------EKFASKIHDVSI-----GKAQYLLESDLHPQFQNLLK--KSQNNTTNP 260 A K G+ +L + P F+N L K + ++ Sbjct: 300 VLAEVRKNPASFADLAKKYSGDPGSAAQGGELGFLGKGATVPPFENALFALKQPGDISDV 359 Query: 261 YVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 + G I + + + + A+K L + K +E Sbjct: 360 VQSDFGFHIIKLEEVKGGGVQPLEAVKPELERELRTQLANKKYSELAD 407 >gi|291515480|emb|CBK64690.1| Parvulin-like peptidyl-prolyl isomerase [Alistipes shahii WAL 8301] Length = 463 Score = 86.3 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 29/256 (11%), Positives = 75/256 (29%), Gaps = 15/256 (5%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQE 89 M ++ + G I ++ L Q+ + A++ L+ + L + Sbjct: 19 QVMLDKVVAVVGGSSILYSEVDDYARQLTEQRRQEGYTSDRDPMNEALEALMTQKLLYNQ 78 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV-- 147 + + + + + + + K + + ++ + + Sbjct: 79 AQIDSVKVNDADIMARVEEQVQQMVEAEGSIPQLEAKHHMPIFNIREIMRQRYEEQAYAN 138 Query: 148 -VKNDFMLKYGNLEMEIPANKQKMKNIT----VREYLIRTVLFSIPDNKLQNQGFVQKRI 202 ++ + + K + E+ + + + +Y+ + Q ++ I Sbjct: 139 SMQTEVVDKVSVIPGEVERFYKSISKDSLPLVADQYVYAQITKFPKSMTAAKQRTRERLI 198 Query: 203 KDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNP 260 E K N ++ + G+ L P F L K + Sbjct: 199 DMRERVITGKAKFENLARMYSQDPGTMMRGGEMDPSTLEQLDPAFGAALEKMRPGQISEV 258 Query: 261 YVTQKGVEYIAICDKR 276 +Q G I + DKR Sbjct: 259 VESQFGFHIIQLLDKR 274 >gi|197248545|ref|YP_002145433.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197212248|gb|ACH49645.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 623 Score = 86.3 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 39/396 (9%), Positives = 102/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S+ +NG+ I+ Sbjct: 1 MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYL-IGGSNNYAAKVNGQEISRAQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 +++ +++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K + E+ + + K + R + Sbjct: 180 TDELAALVSQQRVVREAVIDVNALAAKQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + + Sbjct: 240 AATMQAPVSDADIQAYYDQHVDQFTQPERIRYSIIQTKTEDDAKAVLDALNKGEDFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ES P+ +N K + + + G + D + Sbjct: 300 KEKSTDIISARNGGDMGWLEESATVPELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|324325280|gb|ADY20540.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 285 Score = 86.3 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 30/304 (9%), Positives = 76/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT D K++ K Sbjct: 4 KHIFIITALLSILMLSACGQKNDSDTVATATDSTITKSDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + S D + + + Sbjct: 56 LYEMMAQDVITKKYKVSDDDVDKELQKAKNQYGDQFKNVLKNNGLKDEADF--------- 106 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 107 --KNQIKFKLAMNEAIKKSITEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLKV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK++L +K + +I + ++ A Sbjct: 205 GQISNPVTSPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERISDPIFGKKLLQDELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|163848456|ref|YP_001636500.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus aurantiacus J-10-fl] gi|222526384|ref|YP_002570855.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus sp. Y-400-fl] gi|163669745|gb|ABY36111.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus aurantiacus J-10-fl] gi|222450263|gb|ACM54529.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus sp. Y-400-fl] Length = 321 Score = 86.3 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 80/296 (27%), Gaps = 40/296 (13%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 S A I + E I D + + G + + ++I L Sbjct: 49 AGGTSGTVPAPDDAI-ARVGEEFILRRDFDR-------LYLPGADPQNLIDQMIDVELVV 100 Query: 88 QEIEKSGITFDSNTVNYFFVQH--ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 Q G T D T++ Q A+ G A+ + D + ++ L + Sbjct: 101 QAALAEGATVDEATIDSQVEQLRLAQAGGDEAQFLTFLQDNNIADEEELRRLLRRDYLIE 160 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 ++ +K+ T + R +L + + +++ + I Sbjct: 161 QML---------------------LKHTTAEQVRARHILVAATPEEAESRKATAEAI--- 196 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQ 264 + G + F+ + Q T Sbjct: 197 LAELQGGADFAALARARSDDPGSAAQGGDLGWAPRGVYVEPFEEAVFSMQPGELRLVQTD 256 Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA----IIHY 316 G I + + ++ +A L Q +V +LRS+A I Sbjct: 257 FGWHIIEVTEGPEVRSFTD-RALLETQAGQEAFSATFLPWVAELRSSAEAAGKIEI 311 >gi|296332416|ref|ZP_06874877.1| molecular chaperone lipoprotein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673697|ref|YP_003865369.1| molecular chaperone lipoprotein [Bacillus subtilis subsp. spizizenii str. W23] gi|296150334|gb|EFG91222.1| molecular chaperone lipoprotein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411941|gb|ADM37060.1| molecular chaperone lipoprotein [Bacillus subtilis subsp. spizizenii str. W23] Length = 284 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 90/303 (29%), Gaps = 43/303 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + I++ + + + + + +T G++ + Sbjct: 1 MKKIAIAAITATSILALSACSSGDKEVIAKTDAGDVTKGELYTNMK--------KTAGAS 52 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +L+ E + + + D + L++Q D Sbjct: 53 VLTQLVQEKVL---------DKKYKVTDKEIDNKLKEYKTQLGDQYTALEEQYGKDY--- 100 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 L Q + + + + + + +K+ ++ Sbjct: 101 --LKEQVKYELLTQKAAKDNIKVTDADTKEYWEGLKDKIRASHI---------------L 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQ 254 +K ++ E+ + K + +++++ G + + + +F + K Sbjct: 144 VADKKTAEEVEKKLKKGEKFEDLAKEYSTDNSASQGGDLGWFAKDGMVAEFSKAAFKLKT 203 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 ++P TQ G I ++R G +K L ++ K+ E V+K+ A Sbjct: 204 GEVSDPVKTQYGYHIIKKTEER--GKYDDMKKELKSEVLEQKLNDTTAVQEAVQKVMKKA 261 Query: 313 IIH 315 + Sbjct: 262 DVE 264 >gi|229120788|ref|ZP_04250031.1| Foldase protein prsA 2 [Bacillus cereus 95/8201] gi|228662793|gb|EEL18390.1| Foldase protein prsA 2 [Bacillus cereus 95/8201] Length = 285 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 31/304 (10%), Positives = 77/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + +++ SS T IT D K++ K Sbjct: 4 KHIFIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E+I + + ++ + S D + + + Sbjct: 56 LYEMIAQDVITKKYKVSDDDVDKEVQKAKSQYGDQFKNVLKNNGLKDEADF--------- 106 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 107 --KNQIKFKLSMNKAIKQSVTEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLKI 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK++L +K + +I + ++ A Sbjct: 205 GQISNPVKSPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERITDPIFGKKLLQSELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|15966379|ref|NP_386732.1| hypothetical protein SMc02451 [Sinorhizobium meliloti 1021] gi|307313034|ref|ZP_07592661.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sinorhizobium meliloti BL225C] gi|307321040|ref|ZP_07600446.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sinorhizobium meliloti AK83] gi|15075650|emb|CAC47205.1| Conserved hypothetical protein, contains a peptidyl-prolyl cis-trans isomerase signature [Sinorhizobium meliloti 1021] gi|306893315|gb|EFN24095.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sinorhizobium meliloti AK83] gi|306899353|gb|EFN29987.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sinorhizobium meliloti BL225C] Length = 284 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 34/290 (11%), Positives = 75/290 (25%), Gaps = 48/290 (16%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETLKKQ 88 + + + + I ++ I L Q + + A+ +I L + Sbjct: 19 GVARAEGTDPVIAKVGDQEIRQSELDLAITSLDPQLQRMPDEQKRAAALSAVIDVKLLLK 78 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 + EK G+ + +L + + Sbjct: 79 DAEKEGL------------------------------QNDEAFKQRVAFLTERELHNAFF 108 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 K + + E++ +K+ E R +L D + Sbjct: 109 KKHVVDAVTSEEVKARYDKEVAAIPPQEEVKARHILVKTEDEAKDVIKELDA-------- 160 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKG 266 + + ++ + G Y + + P+F+ + T P TQ G Sbjct: 161 ---GKNFADLAKAKSTDPNKEEGGDLGYFTKGRMVPEFETAAFALEKGAYTKTPVKTQFG 217 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I I DKR + Q + E + + + + Sbjct: 218 FHVILIEDKRPQAP--PTLEQVEPQVRQLVMRDKYLELLNSAKESTAVEI 265 >gi|187928946|ref|YP_001899433.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii 12J] gi|187725836|gb|ACD27001.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii 12J] Length = 646 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 48/408 (11%), Positives = 107/408 (26%), Gaps = 103/408 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M V T + L+ V F + SY S+ SS ++G+VI+ ++ R+ Sbjct: 1 MLDFVRTH-RRLMFLVLLILVFPSFVFFGVQSYSSFMDSSHDAAKVDGKVISTNEVDARV 59 Query: 61 -------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 Q ++ + + +I + + E+ ++ +T + + + Sbjct: 60 REQTERLRQMLGAQYDPRQFEGPQMRRDVLDGIIQQRVLANEVVRANLTISNEKIRDTIL 119 Query: 108 Q-------HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------- 149 Q + E + L Q + + L + + + Sbjct: 120 QIPAVAALRKPDGSFDQEAYVRLLSAQNMTPEQLEGNLRFELSQQQIPQSIVSSAFVPKS 179 Query: 150 ----------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 D+ K + I A + ++ Sbjct: 180 LVERLIQVRDQQREVQTLLFKPADYAAKVNADDKAIQAYYDAHQQEFSVPEQVKAEYVVF 239 Query: 188 PDNKLQNQG----FVQKRIKDAEESRLRLPKDCNKL------------------------ 219 ++ Q K D +R + ++ Sbjct: 240 SGEEMMKQIPVTPEQIKEYYDQNAARFKTQEERRAAHILIKLPDNAKPADKEAAKKKAEE 299 Query: 220 ------------EKFASKIHDVSI-----GKAQYLLESDLHPQFQNLLK--KSQNNTTNP 260 + A K G+ +L + P F+N L K + ++ Sbjct: 300 VLAEVRKNPASFAELAKKYSGDPGSAAQGGELGFLGKGATVPPFENALFALKQPGDISDV 359 Query: 261 YVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 + G I + + + + A+K L + K +E Sbjct: 360 VQSDFGFHIIKLEEVKGGGVQPLEAVKPELERELRTQLANKKYSELAD 407 >gi|16763833|ref|NP_459448.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161615353|ref|YP_001589318.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551732|ref|ZP_02345485.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167990436|ref|ZP_02571536.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168231441|ref|ZP_02656499.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168240281|ref|ZP_02665213.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261111|ref|ZP_02683084.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168818936|ref|ZP_02830936.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194442454|ref|YP_002039695.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448749|ref|YP_002044487.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469679|ref|ZP_03075663.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197262652|ref|ZP_03162726.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200390757|ref|ZP_03217368.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207855932|ref|YP_002242583.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|16418959|gb|AAL19407.1| peptidyl prolyl isomerase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161364717|gb|ABX68485.1| hypothetical protein SPAB_03124 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401117|gb|ACF61339.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407053|gb|ACF67272.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456043|gb|EDX44882.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197240907|gb|EDY23527.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|199603202|gb|EDZ01748.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205323503|gb|EDZ11342.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205330915|gb|EDZ17679.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333949|gb|EDZ20713.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205340141|gb|EDZ26905.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344153|gb|EDZ30917.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205350111|gb|EDZ36742.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206707735|emb|CAR32020.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261245735|emb|CBG23532.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992168|gb|ACY87053.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157063|emb|CBW16547.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911485|dbj|BAJ35459.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084726|emb|CBY94517.1| putative protease maturation protein [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226030|gb|EFX51081.1| Peptidyl-prolyl cis-trans isomerase ppiD [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322713525|gb|EFZ05096.1| Peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323128772|gb|ADX16202.1| Peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332987401|gb|AEF06384.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 623 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 39/396 (9%), Positives = 102/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S+ +NG+ I+ Sbjct: 1 MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYL-IGGSNNYAAKVNGQEISRAQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 +++ +++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K + E+ + + K + R + Sbjct: 180 TDELAALVSQQRVVREAVIDVNALAAKQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + + Sbjct: 240 AATMQAPVSDADIQAYYDQHVDQFTQPERIRYSIIQTKTEDDAKAVLDALNKGEDFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ES P+ +N K + + + G + D + Sbjct: 300 KEKSTDIISARNGGDMGWLEESATVPELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|229010553|ref|ZP_04167755.1| Foldase protein prsA 2 [Bacillus mycoides DSM 2048] gi|228750751|gb|EEM00575.1| Foldase protein prsA 2 [Bacillus mycoides DSM 2048] Length = 285 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 82/304 (26%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 + F++ + ++S S T IT D K+ LK + L ++ Sbjct: 4 KSTFIITALISILMLSACGQKNDSATIATTTNSTITKSDFEKQ---LKDRYGKDTLYEMV 60 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 Q++I + K + V+ + G F ++ Sbjct: 61 AQDVITKKYK----------VSDDAVDKEVEKAKDQYG------EQFKATLENNRLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLALNEAIKQSVTEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SNENEAKEIKKKLDTGTSFEELAKQESQDLASKDNGGDLGYFGAGKMTPEFEKAAYKLKP 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNA 312 + +NP + G I + DK+DL +K + ++ + ++ A Sbjct: 205 DQISNPVKSPNGYHIIKLTDKKDLQPYDKVKDSIRKDLEEERLADPSFGQKLLQGELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 DIKI 268 >gi|168237567|ref|ZP_02662625.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737891|ref|YP_002113483.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194713393|gb|ACF92614.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197289587|gb|EDY28950.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 623 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 39/396 (9%), Positives = 102/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S+ +NG+ I+ Sbjct: 1 MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYL-IGGSNNYAAKVNGQEISRAQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 +++ +++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K + E+ + + K + R + Sbjct: 180 TDELAALVSQQRVVREAVIDVNALAAKQQVTDQEVSSYYDQNKARFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + + Sbjct: 240 AATMQAPVSDADIQAYYDQHVDQFTQPERIRYSIIQTKTEDDAKAVLDALNKGEDFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ES P+ +N K + + + G + D + Sbjct: 300 KEKSTDIISARNGGDMGWLEESATVPELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|51473757|ref|YP_067514.1| protein export protein PrsA precursor [Rickettsia typhi str. Wilmington] gi|51460069|gb|AAU04032.1| protein export protein PrsA precursor [Rickettsia typhi str. Wilmington] Length = 286 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 82/301 (27%), Gaps = 38/301 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + +IF V ++S ++ ++ T G + + I + + ++ Sbjct: 8 LSVIFLSVSMLSSIAFCDQDKVVATYKGGEVKESQIMQEFKPQLNLQSGETIKN------ 61 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 ++ N L E+ + + Sbjct: 62 --------------FDDFPLQDQEKLIKIYVNNLLLKEEVAKSSITSSKEFQEKLENAKN 107 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +++ N + + NK + + +L QK Sbjct: 108 QLAQQELLANYIKSNITDKMFDDEYNKYVDNLKGKEQIKVAHIL-----------VKSQK 156 Query: 201 RIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL---LESDLHPQFQNLLKK-SQN 255 + + E+F+ K + G Y+ L P+F+N N Sbjct: 157 EANTVKTKLSKGGNFNKLAEEFSLDKATASNGGVIGYIILNQSGQLVPEFENKAFALKVN 216 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + +K+ + I K + +Y+ L + A + Sbjct: 217 EVSTPVKTDFGWHIIKVLEKKPVP--IPTKKEAKVTIDNILAAEILKKYISDLEAKADLK 274 Query: 316 Y 316 Sbjct: 275 I 275 >gi|262198048|ref|YP_003269257.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliangium ochraceum DSM 14365] gi|262081395|gb|ACY17364.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliangium ochraceum DSM 14365] Length = 342 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 39/293 (13%), Positives = 77/293 (26%), Gaps = 44/293 (15%) Query: 34 KSWAMSSRIRTTINGEVIT----DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 +S T+N EVIT I+++ ++ + + E +K + L+ + E Sbjct: 47 QSQTDVDAPLATVNDEVITVGDFQSQINRQAPYVRARYTSTEQKKEFLDTLVSFEVMAAE 106 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 ++ G D V Q + +VK Sbjct: 107 AQRRGFDKDPEVV----------------------------------RTLKQVMIQKLVK 132 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 F + ++ + V + + A + Sbjct: 133 EQFTDELKPEDIPEEELRAYFDEHKEEYQRPDQVRAAAIVLDDKASADKLLSEAKAAAEK 192 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESD---LHPQFQNLLKKSQNNTTNPYVTQKG 266 + S G + +S P + N ++ G Sbjct: 193 NHVAFRNLVTAHSKDGDSKNSGGDLGFFDKSSSDVPAPVIEAAFALDSNQVSDVIDAGNG 252 Query: 267 -VEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I I +R +K L + K K + ++V L+ A I+Y Sbjct: 253 RFYIIKITGRRKAMSKSFDDVKRQLLNRVYRDKRVKMQEDFVAALKEKATINY 305 >gi|325107772|ref|YP_004268840.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces brasiliensis DSM 5305] gi|324968040|gb|ADY58818.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces brasiliensis DSM 5305] Length = 310 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 32/309 (10%), Positives = 94/309 (30%), Gaps = 14/309 (4%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN- 69 F+ + ++F L + + + + IT + + L L + Sbjct: 6 RFLLVALSFFSLCTTFLAAQPEASPKSSQQELAALVGKTRITQAQVDLYLTTLGLPEDQW 65 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 AV +LI TL +Q + + +T S T++ + E+ + L K G+ Sbjct: 66 DTHRSRAVDQLIERTLVRQFLNERNVTPPSATLDRQLALV-EQVLRNEENPEAALKKLGM 124 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + + L++ W V+ + ++ + + + +P Sbjct: 125 TRDELQAELSLPLAWRRYVRQIVSER-----QIAEYFEKHQSELDGTKRKAAQIFLKLPQ 179 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPK--DCNKLEKFASKIHDVSIGKAQYLL-ESDLHPQF 246 + + K + + +++ + ++ + G+ + Sbjct: 180 DASETDIEQAKSRLNELKQQIQAGQLTFAEAAQQHSESPSADKGGELGAFTFSGQMPAAI 239 Query: 247 -QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305 + + + P+ + GV + + ++ ++ + V Sbjct: 240 AKQAFETPVGEISEPFASSFGVHLLHVTEEIPG---QFSLEDARPAILDRYSDEIWKQAV 296 Query: 306 KKLRSNAII 314 +L+ + Sbjct: 297 NRLKQTTRV 305 >gi|253576879|ref|ZP_04854204.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843746|gb|EES71769.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. oral taxon 786 str. D14] Length = 376 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 87/309 (28%), Gaps = 19/309 (6%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN- 69 + L T + + +S++ T G IT+ + + ++ + Sbjct: 1 MLLIALVTVLAFSVMAGCGKNASSGGKDTSKVIATYEGGEITENEFDREQRIVLALQPQM 60 Query: 70 ------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 + + V++ I + + ++ F + G Sbjct: 61 EQFMQMEDFRQYLVKQEIAYEYLEAKADEKTKEAGKKKAEEQFDLMKSSYGEEN------ 114 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + + V K +++ K T + Sbjct: 115 FKNMLDAQKVSEAEFKDYMVRIYTVMEGERQKISEDDVKKEFEATKQDYTTAS-VRHILI 173 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 F+ PD K + + K K+ + + ++++ + G + + S+ Sbjct: 174 NFTDPDGKERTEEETLKLAKEVKAKLDKGEDFAALAKQYSEDPGSKDNGGLYENVEVSNW 233 Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGE---IALKAYLSAQNTPTKIE 298 F+ N +P T+ G I + + + E K + K++ Sbjct: 234 VEAFKQAALTQPLNQIGDPVKTEYGYHIIRVESRTEKKFEDLTQEQKDMIQTTLASNKLD 293 Query: 299 KHEAEYVKK 307 + A ++K Sbjct: 294 EFMAGDLEK 302 >gi|313888943|ref|ZP_07822603.1| putative peptidylprolyl isomerase PrsA1 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845116|gb|EFR32517.1| putative peptidylprolyl isomerase PrsA1 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 249 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 35/283 (12%), Positives = 84/283 (29%), Gaps = 47/283 (16%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKIN----GELEKIAVQELIVETLKKQEIEKSGI 95 ++ +NG+ IT D + I L Q EL K V EL+ + L ++ + G+ Sbjct: 4 DKVLAEVNGKKITGVDYNLFIDSLNPQLKQYFGGEELNKDVVNELVYQALLYEDAMEKGM 63 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + + +S+ + Sbjct: 64 DKEDEFIQ-------------------------------VVEKTKESMLKTYALGKLLAT 92 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + +I ++ K+ + + + ++ E Sbjct: 93 AEVKDEDIKKFYEENKDAFKQGESADASHIL---------VEEEDKAREIYEKIKNGGDF 143 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICD 274 +++++ G + + +F++ + +++ T P TQ G I I Sbjct: 144 EELAKEYSTCPSKEKGGNLGTFTKGQMVKEFEDAVFENEVGTITEPVKTQFGYHIIKINQ 203 Query: 275 KRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K D +K + Q K ++ + + +L+ + Sbjct: 204 KNDARELSFDEVKDRIVEQVRRQKEQEIYNKKITELKDKYEVK 246 >gi|56414392|ref|YP_151467.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363312|ref|YP_002142949.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128649|gb|AAV78155.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094789|emb|CAR60322.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 623 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 39/396 (9%), Positives = 103/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S+ +NG+ I+ Sbjct: 1 MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYL-IGGSNNYAAKVNGQEISRAQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 +++ +++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K + E+ + + K+ + R + Sbjct: 180 TDELAALVSQQRVVREAVIDVNALAAKQQVTDQEVSSYYDQNKSRFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + + Sbjct: 240 AATMQALVSDADIQAYYDQHLDQFTQPERTRYSIIQTKTEDDAKAVLDALNKGEDFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ES P+ +N K + + + G + D + Sbjct: 300 KEKSTDIISARNGGDMGWLEESATVPELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|213613182|ref|ZP_03371008.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 240 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 58/168 (34%), Gaps = 4/168 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 G +++ + + ++I+V E R +L +Q K + A + + Sbjct: 71 IRSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMN-DQQARLKLEEIAADIKSG 129 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEY 269 ++++ G + P F++ L K + P + G Sbjct: 130 KTTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHL 189 Query: 270 IAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D R + + A K K + A ++++ R++A + Sbjct: 190 IELLDTRKVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKI 237 Score = 65.9 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 12/129 (9%), Positives = 39/129 (30%), Gaps = 7/129 (5%) Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-L 250 + Q++ + E +++ + G+ + +L F Sbjct: 1 SEQVNDAQRQAESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALS 60 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 + + P + G + + D R + ++ + +P ++ ++ Sbjct: 61 TAKKGDIVGPIRSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMNDQQARLKLE 120 Query: 307 KLRSNAIIH 315 ++ A I Sbjct: 121 EI--AADIK 127 >gi|168183618|ref|ZP_02618282.1| foldase protein PrsA [Clostridium botulinum Bf] gi|237796999|ref|YP_002864551.1| peptidylprolyl isomerase [Clostridium botulinum Ba4 str. 657] gi|259534738|sp|C3KW94|PRSA_CLOB6 RecName: Full=Foldase protein prsA; Flags: Precursor gi|182673144|gb|EDT85105.1| foldase protein PrsA [Clostridium botulinum Bf] gi|229260856|gb|ACQ51889.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum Ba4 str. 657] Length = 336 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 43/332 (12%), Positives = 103/332 (31%), Gaps = 21/332 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALL 63 S + +L ++ F +V A + +NGE I D+ + R + Sbjct: 1 MKSAKKLLSVLCLGIFILTFTACDMVEKTPEAKAKSTIAKVNGEKIQRKDLDENPRFKQV 60 Query: 64 KLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 Q E + + ELI E + Q+ ++ + +N Sbjct: 61 VSQMKMQYGEEFEKSEQGKEVIKEQKSQILDELITEKILLQKGKELKVIPKDEELNKEAD 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + + ++ K+ L V++ ++++E + Sbjct: 121 KKVNEIKAVYNNDEKKFEETLKSTGFTKETLKEYLKDQIVIEKVINEATKDVKVEDKDAQ 180 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + + + ++ ++ + +K K + + SK Sbjct: 181 KYYNENQS-MFTEKPNTMNVSHILVKTEDEAKKVKKRLDAKEDFAKVAKEVSQDTGSKDK 239 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALK 285 +G Y + + + + +NP TQ G I I K++ + A+K Sbjct: 240 GGLLGDINYNDANFDPTFMKAAMALKEGAISNPVHTQFGYHIIKINSKKEYPVKKFDAVK 299 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + Q K ++ + +++ + + I Y Sbjct: 300 EDIKKQLKQEKQQEAYTKKIEEWKKASKIKTY 331 >gi|229541454|ref|ZP_04430514.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus coagulans 36D1] gi|229325874|gb|EEN91549.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus coagulans 36D1] Length = 290 Score = 85.9 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 29/303 (9%), Positives = 80/303 (26%), Gaps = 36/303 (11%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + ++ + N +T ++ + + Sbjct: 1 MKKWVLSLVLAGSMFGLAACGNSGNSAVVKTNAGNVTKDELYNAMK--------DKYGST 52 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 +Q+L +E + ++ D + + SSF + Sbjct: 53 VLQQLTIEKVLSKKYTVKKSEID-----------KQVNDTKKQLGSSFNTALQQYGYANE 101 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + E ++ ++ I Sbjct: 102 KDFRNSVKVGLLEQKAAEATIHPTEKQLKNYYNNDIKPKIKARHILVS------------ 149 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + + +D ++ + +K+++ G + ++ F+N K Sbjct: 150 --SKSKAEDIKKQLDKGADFATLAKKYSTDTATASKGGDLGWFGAGEMDSDFENAAYKLK 207 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI-EKHEAEYVKKLRSNA 312 N + P T G I + ++ +K + Q +K+ + +KK A Sbjct: 208 VNEISGPVKTSYGYHIIQLTGEKQKKPYSEMKKDVVKQYKESKVTTEKIQSVLKKELKAA 267 Query: 313 IIH 315 I Sbjct: 268 DIK 270 >gi|86158923|ref|YP_465708.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-C] gi|85775434|gb|ABC82271.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-C] Length = 524 Score = 85.9 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 42/385 (10%), Positives = 92/385 (23%), Gaps = 73/385 (18%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKS-----WAMSSRIRTTINGEVITDGD 55 M V + + L ++++F I S + +NG+ I+ D Sbjct: 1 MLDIVRANKKGILSWLIVLGIVVVFAINFGPGSLSKGGAGCGGAPAYAARVNGKSISAAD 60 Query: 56 ISKRIALLKLQKINGE-------------LEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++ L L + A+ L+ L QE + G+ V Sbjct: 61 FERQYENLLRFYQQQAGEGFTRELAAQLGLGRQAMGVLVDRELALQEARRRGVVVTDREV 120 Query: 103 NYFFVQH---ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF------- 152 + Q N E + + +F+ + ++ ++ Sbjct: 121 SEAVHQMPAFQENGQFRYETYLEAVRANYGSPGNFEAAVRDDLLYQKILGALVETVKVPA 180 Query: 153 --------------------------MLKYGNLEM-------------EIPANKQKMKNI 173 + + E + + Sbjct: 181 TEVRAQWAASADRAALKFVRFPISAAQAEVKVSDADAKAFADREGARVEAFYKENADRYD 240 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQ-KRIKDAEESRLRLPKDCNKLEKFASKIH-DVSI 231 + +R VL + ++ K+I +A + + + Sbjct: 241 QKAKVHVRHVLARVAPGASADEEAAARKKIDEAAARVKKGEDFAKVAAALSDDPNTKDRG 300 Query: 232 GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK---RDLGGEIALKAY 287 G ++ E F + + P T G I + R + E A Sbjct: 301 GDLGFVSEGLADAAFAKAALALKAGQVSEPVRTPAGWHLIRAEEVVPARQVTLEAARLDI 360 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNA 312 + + E + A Sbjct: 361 ARELVARDRAQALAREKAQAALDAA 385 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 3/76 (3%) Query: 243 HPQFQNLLKKSQNNT-TNPYVTQKG--VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 Q L + T G V + + + D A +A + A+ K E+ Sbjct: 433 PELAQAALTAKAGEVLPKVFDTPSGPVVAVVELRESPDPARFEAERAGIEARLQGMKAEQ 492 Query: 300 HEAEYVKKLRSNAIIH 315 +++ LR A I Sbjct: 493 VRRAWLEDLRGKAKIE 508 >gi|224582290|ref|YP_002636088.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224466817|gb|ACN44647.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 623 Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 39/396 (9%), Positives = 102/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S+ +NG+ I+ Sbjct: 1 MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYL-IGGSNNYAAKVNGQEISRAQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 +++ +++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K + E+ + + K + R + Sbjct: 180 TDELAALVSQQRVVREAVIDVNALAAKQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + + Sbjct: 240 AATMQAPVSDADIQAYYDQHVDQFTQPERIRYSIIQTKTEDDAKAVLDALNKGEDFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ES P+ +N K + + + G + D + Sbjct: 300 KEKSTDIISARNGGDMGWLEESATVPELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|329957336|ref|ZP_08297856.1| PPIC-type PPIASE domain protein [Bacteroides clarus YIT 12056] gi|328523049|gb|EGF50152.1| PPIC-type PPIASE domain protein [Bacteroides clarus YIT 12056] Length = 455 Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 31/273 (11%), Positives = 80/273 (29%), Gaps = 12/273 (4%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQKINGELE 73 + + + Y + + + E I ++ + AL + +K + + Sbjct: 7 FKFVVLFALTLLAGSTVYGQDNVIDEVVWVVGDEAILKSEVEEARMSALYEGRKFDRDPY 66 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSFLDKQGIG 130 + +E+ V+ L + I V + S E + +K Sbjct: 67 CVIPEEIAVQKLFLHQAALDSIEVSEAEVIQRVDYMTNMYITNIGSREKMEEYFNKTSSQ 126 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + A + + ++ + + E+ + + ++ + + I Sbjct: 127 IRETLRDNAREGLKVQKMQQKLVGEIKITPAEVRRYFKDLPQDSIPYIPTQVEVQIITQQ 186 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQ 245 ++ K + R+ K A ++ G+ + L P Sbjct: 187 PKVPLEEIENVKKRLRDFTDRITKGETSFSTLARMYSEDRGTAINGGEMPFTGRGYLDPA 246 Query: 246 FQN--LLKKSQNNTTNPYVTQKGVEYIAICDKR 276 F N + N + ++ G I + +KR Sbjct: 247 FANVAFNLQDPNKVSKIVESEFGFHIIQLMEKR 279 >gi|325954018|ref|YP_004237678.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Weeksella virosa DSM 16922] gi|323436636|gb|ADX67100.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Weeksella virosa DSM 16922] Length = 448 Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 30/277 (10%), Positives = 87/277 (31%), Gaps = 12/277 (4%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITDGDISKRIALLKLQKINGELE 73 T + + C + + +++I + E++ D D+ + KLQ + + Sbjct: 4 TVLLLTLFMCSIAQGLFAQTHKANKIEGIAAVVGDEIVLDSDVERDFQTAKLQGMEVKDR 63 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNY-----FFVQHARNTGLSAEDFSSFLDKQG 128 + +++E + ++ + +N + + G F K Sbjct: 64 CEFLNNMLLEKVLIDRAKQDTLVVVTNDEVQRTLKGQIERFTQQIGSEKAVIDYFGFKTK 123 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV--REYLIRTVLFS 186 + QY +I+ + + E+ ++ K ++ + + Sbjct: 124 AELENELQYYIRDNIYAREKRERVVSGLDATPEEVRMFFEEHKTELPDVKDEYSISHIIL 183 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQ 245 P+ +N+ V +K ++ K ++ + G+ + + + Sbjct: 184 YPEIDPENEQKVIDELKQIKKDVEEGSSFATKAILYSEDPGSATNGGQYLKVKRGMMVKE 243 Query: 246 F-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 F + + P+ T G I + ++ + Sbjct: 244 FDAVAFNLDEGQVSEPFKTDFGYHIIQLEKRKGQELD 280 >gi|62179064|ref|YP_215481.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62126697|gb|AAX64400.1| peptidyl prolyl isomerase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] Length = 623 Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 39/396 (9%), Positives = 102/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S+ +NG+ I+ Sbjct: 1 MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYL-IGGSNNYAAKVNGQEISRAQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 +++ +++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K + E+ + + K + R + Sbjct: 180 TDELAALVSQQRVVREAVIDVNALAAKQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + + Sbjct: 240 AATMQAPVSDADIQAYYDQHVDQFTQPERIRYSIIQTKTEDDAKAVLDALNKGEDFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ES P+ +N K + + + G + D + Sbjct: 300 KEKSTDIISARNGGDMGWLEESATVPELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|94502167|ref|ZP_01308665.1| peptidyl-prolyl cis-trans isomerase D [Oceanobacter sp. RED65] gi|94425692|gb|EAT10702.1| peptidyl-prolyl cis-trans isomerase D [Oceanobacter sp. RED65] Length = 608 Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 44/399 (11%), Positives = 103/399 (25%), Gaps = 89/399 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +++ F + I S + +NGE IT ++ + + Sbjct: 1 MLQAIRDGSKGIAARIIVGLIILTFALFGIESIVALGGGEDAPAEVNGEEITLLEVQQAV 60 Query: 61 ALLKLQKINGE-------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 K + L + AV+ LI + L Q +SG+ ++ Sbjct: 61 NAQKTRLQRQFGENFDPAMFDENLLRQAAVRSLIDQELLAQAATESGVYISDQDIDRLIV 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN-------------- 150 N A + + G +++ + V Sbjct: 121 QSPNFQVNGAFDAATYDLTIRSMGFTRMTYREAVRESIKTQQVQSAWQGTEFATDLEKEQ 180 Query: 151 -------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 +F + +I + + + + + K Sbjct: 181 LSLLENQIRSIKYKEYKSDNFKESVQLSDEDIQSFYEANDSRFMTTESVIVDYVIFDKEK 240 Query: 192 LQNQ-----GFVQKRIKDAEESRLRLPKD---------------------------CNKL 219 L Q +Q+R + + Sbjct: 241 LAEQVIVTEDEIQERYDAMLQESQENKEYRVAHIMLLSADDEARKTLSEAKSKLGQGESF 300 Query: 220 EKFASKIHD-----VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC 273 E A + + + G + + P+F + + ++ T+ G+ I + Sbjct: 301 ESLAERYSEDDTSKYAGGDLGFASATIYEPEFADAVLSLEVGAVSDIVETRDGLHLIKLV 360 Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 D R ++ +K + +IE E ++ + Sbjct: 361 DTRQPEIAAYDEMKDTIEQNLVNEQIEVRYIEMLESFKD 399 >gi|206561958|ref|YP_002232721.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia J2315] gi|198037998|emb|CAR53944.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia J2315] Length = 272 Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 88/307 (28%), Gaps = 55/307 (17%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 +L I + +S A ++ T+NG IT D+ + Q + ++ + +L Sbjct: 6 LLTIVALAGALSGPVHAQTAATVATVNGTPITQTDVDTLLRA-SGQPDSPQIRQAIKNQL 64 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I L +Q EK+ Q + Sbjct: 65 ITRVLVQQAAEKANYADKPEVKAA------------------------------MQQAKV 94 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + +++ + E + + + E+ R ++ P ++ Sbjct: 95 TAEVQLYLRDHVKPEPVTDEQVKARYDELVAALGKNEFKPRLIVVKDPVAAATVLSELKA 154 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD---------LH-PQFQNLL 250 +++ + G+ ++ + L P Q L Sbjct: 155 -----------GKSFDGLARQYSVAPSRDTGGELPWVSFNTPAVEGRTAGLPLPVAQALE 203 Query: 251 KKSQNNTTNPYVTQKGV-EYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 K S T + GV + + KR + G K L Q EK A+ + Sbjct: 204 KLSVGAVTKDSIPVDGVRAIVKLDAKRPTQVPGFETAKPTLQQQLQAIAAEKASAQMIGN 263 Query: 308 LRSNAII 314 L +A I Sbjct: 264 LLKDAKI 270 >gi|322614730|gb|EFY11659.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618836|gb|EFY15724.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623543|gb|EFY20382.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629158|gb|EFY25937.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631879|gb|EFY28633.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637384|gb|EFY34086.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642069|gb|EFY38679.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647888|gb|EFY44363.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322653272|gb|EFY49605.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660579|gb|EFY56815.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664731|gb|EFY60924.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669216|gb|EFY65366.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670761|gb|EFY66894.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322679000|gb|EFY75055.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682029|gb|EFY78054.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685142|gb|EFY81139.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192964|gb|EFZ78187.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196954|gb|EFZ82096.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203939|gb|EFZ88956.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206976|gb|EFZ91929.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323214179|gb|EFZ98937.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214497|gb|EFZ99248.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219161|gb|EGA03658.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227003|gb|EGA11184.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230179|gb|EGA14299.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233917|gb|EGA18006.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238389|gb|EGA22447.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244076|gb|EGA28085.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246237|gb|EGA30220.1| periplasmic folding chaperone [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251863|gb|EGA35726.1| periplasmic folding chaperone [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257859|gb|EGA41538.1| periplasmic folding chaperone [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261127|gb|EGA44719.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264943|gb|EGA48442.1| periplasmic folding chaperone [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272506|gb|EGA55913.1| periplasmic folding chaperone [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 623 Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 39/396 (9%), Positives = 102/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S+ +NG+ I+ Sbjct: 1 MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYL-IGGSNNYAAKVNGQEISRAQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 +++ +++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K + E+ + + K + R + Sbjct: 180 TDELAALVSQQRVVREAVIDVNALAAKQQVTDQEVSSYYDQNKARFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + + Sbjct: 240 AATMQAPVSDADIQAYYDQHVDQFTQPERIRYSIIQTKTEDDAKAVLDALNKGEDFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ES P+ +N K + + + G + D + Sbjct: 300 KEKSTDIISARNGGDMGWLEESATVPELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|114777815|ref|ZP_01452746.1| peptidyl-prolyl cis-trans isomerase D [Mariprofundus ferrooxydans PV-1] gi|114551806|gb|EAU54346.1| peptidyl-prolyl cis-trans isomerase D [Mariprofundus ferrooxydans PV-1] Length = 636 Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 29/258 (11%), Positives = 68/258 (26%), Gaps = 8/258 (3%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 L+L + L K V + + + ++ + + V A Sbjct: 148 QDYENDLRLNIMVDALHKALVDSV--HVSETEIRDRFNHDYQQRVLAAVVVDPATQLNKV 205 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 ++K L I ++ E E+ +K K R Sbjct: 206 KVSDEQAKAWYEAHKQNYKSPLRINVNTVEIDPRKLAEDVQVDESEVRKAFEKRKAEFSR 265 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGK 233 + I + + K E ++ R+ + + + S G+ Sbjct: 266 PEERKAQHILIKVAENAPEAVRAAARKKIEAAQARIKAGEDFSAVAKAVSEDGTASSGGE 325 Query: 234 AQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSA 290 + + + F + + ++ T G I + D R +K + Sbjct: 326 LGWFKQGSMVTAFDQAVFAMDKGQVSDIVETPFGYHLIRLEDIRPAHEASYDDVKDGIRQ 385 Query: 291 QNTPTKIEKHEAEYVKKL 308 + + + + L Sbjct: 386 DLVKARAAEEAYKLSQDL 403 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 30/321 (9%), Positives = 85/321 (26%), Gaps = 30/321 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I + + + F + + Y + I T+NG+ I + + Sbjct: 1 MLESMRSHAQGWIAKIILGGIALSFVLWGVGDYFLGGKTEPI-ATVNGKAIGGAEFYQAY 59 Query: 61 -------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + +++ +Q LI + ++ + ++ V Sbjct: 60 ERQLNAYRSMLGKQYSSALMDSLGVKETTLQTLINRRIMLDTAQQLHLAAPASVVLATVH 119 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM-EIPAN 166 D + Q +V ++ + E Sbjct: 120 SDPSFQSARGFDVQRYHALTRNMGFSSAQDYENDLRLNIMVDALHKALVDSVHVSETEIR 179 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + + R V + NK++ K +A + + + Sbjct: 180 DRFNHDYQQRVLAAVVVDPATQLNKVKVSDEQAKAWYEAHKQNYK-----------SPLR 228 Query: 227 HDVSIGKAQYLLESDLHP----QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 +V+ + ++ + + +K + + P + I + + Sbjct: 229 INVNTVEIDPRKLAEDVQVDESEVRKAFEKRKAEFSRPEERKAQHILIKVAENAPEAVRA 288 Query: 283 ALKAYLSAQNTPTKIEKHEAE 303 A + + A K + + Sbjct: 289 AARKKIEAAQARIKAGEDFSA 309 >gi|88797590|ref|ZP_01113179.1| Parvulin-like peptidyl-prolyl isomerase [Reinekea sp. MED297] gi|88779762|gb|EAR10948.1| Parvulin-like peptidyl-prolyl isomerase [Reinekea sp. MED297] Length = 404 Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 32/308 (10%), Positives = 89/308 (28%), Gaps = 31/308 (10%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--- 71 + + + + RI N +VIT+ +++R+ ++ Q + Sbjct: 4 WFKSALLATSLL---MSTLTYAQTLDRIAAVANDDVITELQLAQRVEAVRQQYRSNPNVL 60 Query: 72 -----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 L + + +I+E+L+ Q E+ + VN A ++ + + + Sbjct: 61 PTDDVLTRQVLDAMILESLQMQLAERGNLVIPEQQVNAAIQSIASRQNMTLDQLLAAVQS 120 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 G + F++ + + ++ + + + E+ + +++E + Sbjct: 121 SGQSVSDFREQIRREITLNELQQQIVGRQIFISDAEVERFLKSQSGQSLQETEYQLYYKR 180 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 ++ + R+ E + F Sbjct: 181 FDVDQQAEADALVDRLNSGESLLD-----------------SPDSRDLGMRTLDQIPSIF 223 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT--PTKIEKHEAEY 304 + L+ + N + + DK + + L A+ Sbjct: 224 RTLVPVLEENEAVLLPRDGVLHLAQLADKTEAASVNIEEYQLRHILIKTDQLFNAESAQA 283 Query: 305 V-KKLRSN 311 + + LR Sbjct: 284 LAEDLRQR 291 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 29/274 (10%), Positives = 85/274 (31%), Gaps = 13/274 (4%) Query: 50 VITDGDISKRIA----LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 IT ++ ++I + ++ L+ + Q L + D Sbjct: 135 EITLNELQQQIVGRQIFISDAEVERFLKSQSGQSLQETEYQLYYK---RFDVDQQAEADA 191 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 V + + S D + + P + +N+ +L + + + Sbjct: 192 LVDRLNSGESLLDSPDSRDLGMRTLDQIPSIFRT---LVPVLEENEAVLLPRDGVLHLAQ 248 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 K + +V + I ++L N Q +D + L ++++ Sbjct: 249 LADKTEAASVNIEEYQLRHILIKTDQLFNAESAQALAEDLRQRVLNGESMAELADEYSQD 308 Query: 226 I-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EI 282 G+ + + F++ + ++ + + G ++ + +R Sbjct: 309 NGSRGRGGELGWATLDNYVESFRDAARSTEEGELSDVFRSPYGFHFLRVEGQRTRDVGTD 368 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 L+ + Q + + + + +LR+ + + Sbjct: 369 VLRNQIRNQLSQQRYSEALQRWQSELRAESFVEI 402 >gi|47568364|ref|ZP_00239065.1| peptidyl-prolyl cis-trans isomerase [Bacillus cereus G9241] gi|47554912|gb|EAL13262.1| peptidyl-prolyl cis-trans isomerase [Bacillus cereus G9241] Length = 285 Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 81/304 (26%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + +++ SS T IT D K++ K Sbjct: 4 KHIFIITALISLLMLAACGQKNSSATVATATDSTITKSDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + S D + + + + + FK Sbjct: 56 LYEMMAQDVITKKYKVSDADVDKEVQ-------KAKNQYGDQFTAVLENNRLKDEADFKN 108 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + + +K K + Sbjct: 109 QIKFKLAMNEAIKKSVTEKDVKD------------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFNSGKMTPEFETAAYKLKV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 ++P + G I + K+DL +K + +I + ++K A Sbjct: 205 GQISDPVQSPNGYHIIKLTGKKDLQPFNEVKDSIRKNLEAERIADPTFSHKLLQKELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|157825956|ref|YP_001493676.1| protein export protein prsA precursor [Rickettsia akari str. Hartford] gi|157799914|gb|ABV75168.1| protein export protein prsA precursor [Rickettsia akari str. Hartford] Length = 282 Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 39/301 (12%), Positives = 81/301 (26%), Gaps = 38/301 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + +IF V ++S +A ++ T G + + I K + ++ Sbjct: 4 LSVIFLSVSMLSGIVFADQDKVVATYKGGEVKESQIMKEFKPQLNLQSGETIKN------ 57 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 ++ N L + + + Sbjct: 58 --------------FDDFPPQDQEKLIKIYVNNLLLKAEVAKSNITSSKEFQEKLENAKN 103 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +++ N + + NK + + +L QK Sbjct: 104 QLAQQELLANYIKSNITDKMFDDEYNKYVGNLKGKEQIKVAHIL-----------VKSQK 152 Query: 201 RIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL---LESDLHPQFQNLLKK-SQN 255 D + + E+ + K + G Y+ L P+F+N N Sbjct: 153 EANDIKTKLSKGGNFTKLAEELSLDKASASNGGVIGYIILNQPGQLVPEFENKAFALKVN 212 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + +K+ + I K + +Y+ L S A + Sbjct: 213 EVSIPVKTTFGWHIIKVLEKKPVP--IPTKEEAKVTIDNILAAEVLKKYISDLESKADLK 270 Query: 316 Y 316 Sbjct: 271 I 271 >gi|52144166|ref|YP_082662.1| peptidylprolyl isomerase [Bacillus cereus E33L] gi|51977635|gb|AAU19185.1| peptidyl-prolyl cis-trans isomerase (protein export protein) [Bacillus cereus E33L] Length = 285 Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 82/304 (26%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + +++ SS T IT D K+ LK + L ++ Sbjct: 4 KHIFIITALISILMLAACGQKDSSATVATATDSTITKSDFEKQ---LKDRYGKDMLYEMM 60 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 Q++I + K E + + + ++ ++ Sbjct: 61 AQDVITKKYKVSEDDVDKEVQKAKSQYGDQFKNILKNNGLKDEA---------------- 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSVTEKDVKA--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDVGASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLKV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK++L +K + +I + ++K A Sbjct: 205 GQISNPVKSPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERIADPTFSHKLLQKELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|227823202|ref|YP_002827174.1| putative foldase/peptidyl-prolyl cis-trans isomerase [Sinorhizobium fredii NGR234] gi|227342203|gb|ACP26421.1| putative foldase/peptidyl-prolyl cis-trans isomerase [Sinorhizobium fredii NGR234] Length = 284 Score = 85.9 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 31/286 (10%), Positives = 70/286 (24%), Gaps = 48/286 (16%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETLKKQEIEK 92 + + + + I ++ I L Q + A+ +I L ++ EK Sbjct: 23 AEGTDPVVAKVGDQEIRQSELDLAITSLDPQLQRMPEEQKRAAALSAVIDVKLLVKDAEK 82 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 G+ + +L + + K Sbjct: 83 EGL------------------------------QNDAVFKQRVAFLTERELHNAFFKKHV 112 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 + E++ +K+ E R +L D + Sbjct: 113 VDAVTKEEVKARYDKEIAAIPAQEEVKARHILVKTEDEAKAIIKELDA-----------G 161 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT--NPYVTQKGVEYI 270 + ++ + G Y + + P+F+ + T P +Q G I Sbjct: 162 KSFVELAKAKSTDPNKDDGGDLGYFTKGRMVPEFETAAFALEKGTYTKTPVKSQFGFHVI 221 Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + DKR + Q + + + + Sbjct: 222 LVEDKRPQAP--PPLEQVEPQVRQLIMRDKYLALLDTAKKATGVEI 265 >gi|134295947|ref|YP_001119682.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia vietnamiensis G4] gi|134139104|gb|ABO54847.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia vietnamiensis G4] Length = 260 Score = 85.9 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 85/278 (30%), Gaps = 47/278 (16%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I + +A L + Q + +L++ QEL+ + QE + GI + Sbjct: 25 IAVVNGTPIPKSRVDAMVAQLVQQGQADSPQLQQAVRQELVNREILMQEAIREGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + +F+ K + Sbjct: 85 VKAQI-------------------------------AVAQQTVVLRSMIENFLKKNQPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A + + + + + + K + + Sbjct: 114 AEVKARYDDLVKGAGGNREYHLHHILVDNEQQAKDLIAKIK---------AGAKFEDLAK 164 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F +K + T+ P TQ G I + D RD Sbjct: 165 QYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDQPVKTQFGWHIIRVDDVRD 224 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + AQ +++ + + LR A I Sbjct: 225 VAP--PPFDQVKAQIAQQIVQQKLQAFEEGLRQQAKIQ 260 >gi|238764856|ref|ZP_04625797.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia kristensenii ATCC 33638] gi|238696963|gb|EEP89739.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia kristensenii ATCC 33638] Length = 627 Score = 85.9 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 38/398 (9%), Positives = 107/398 (26%), Gaps = 87/398 (21%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + ++ + + +++ F + + SY + +NG+ I+ G + + + Sbjct: 1 MDNLRAAANNVVLKIILALIMLSFILTGVGSYLIGGSNDF-AAKVNGQEISRGQLEQAVQ 59 Query: 62 LLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 + + +L + + +L+ L Q +K G+T V Sbjct: 60 SERGRLQQQLGEQFSALAANEGYMLQLRQQVLGQLVNNMLLDQYAKKLGLTASDEQVKDA 119 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY--------------------------LA 139 Q D S +L+ Q+ A Sbjct: 120 IRQAPYFQTDGKFDNSKYLELVNRMGYTPDQFAQLQRQQLINQQLLQAFGDTGFVLPIEA 179 Query: 140 IQSIWPDVVKNDF----------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + + + + + E+ A + KN + ++ ++ Sbjct: 180 QAMSELILQQREVRLATLDLKALQAQQKVTDEELQAYYDQNKNSFIAPEQMKISFIAMDA 239 Query: 190 NKLQNQG-------------------------------FVQKRIKDAEESRLRLPKDCNK 218 +Q++ + K A + + Sbjct: 240 AAMQDKITITEEDIAAYYEQHKSTYTQPEQRNYSVIQFKTEAEAKTALDELKKGADFAAM 299 Query: 219 LEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 ++ ++ I + G+ +L + + + ++ + G + + D + Sbjct: 300 AKEKSTDIISRKNGGELGWLEPETTADELKQANLTEKGQLSDVVKSSVGYLIVRLNDIKP 359 Query: 278 LGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + L+ Q K +K+ A Sbjct: 360 AQVKPLSEVHDALAKQVKQEKAVDAYYALQQKVSEAAT 397 >gi|17546434|ref|NP_519836.1| peptidyl-prolyl cis-trans isomerase transmembrane protein [Ralstonia solanacearum GMI1000] gi|17428732|emb|CAD15417.1| probable peptidyl-prolyl cis-trans isomerase transmembrane protein [Ralstonia solanacearum GMI1000] Length = 648 Score = 85.9 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 46/419 (10%), Positives = 102/419 (24%), Gaps = 107/419 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M V T + L+ V F + Y + S + VIT ++ R+ Sbjct: 1 MLDFVRTH-RRLMFLVLLILVFPSFVFFGVQGYSRFMDGSHDAAKVGDTVITTSELDTRV 59 Query: 61 -------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 Q ++ + + +I + + E ++ ++ + V Sbjct: 60 REQTERLRQMLGAQYDPRQFEGPQMRRDVLDGIIQQRVMVNEASRANLSVADSKVRETIE 119 Query: 108 Q-------HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------- 149 Q + + + L QG+ F L + + + + Sbjct: 120 QIPAVAQLRKPDGKFDTDAYIKLLAAQGMTPEQFDARLRSELVLQQIPQSIVSSAFVPKS 179 Query: 150 ----------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 D+ K + I A + ++ Sbjct: 180 LVDRLIEARDQQREVQALLFKPADYAAKVTVDDKAIQAYYDAHQQEFAVLEQVKAEYVVF 239 Query: 188 PDNKLQNQG----FVQKRIKDAEESRLRLPKDCNKL------------------------ 219 ++ Q K D +R + + Sbjct: 240 SGEEMMKQIPVTPEQLKEYYDQNAARFKTEEQRRAAHILIKLPDNAKPADKDAAKKRAEE 299 Query: 220 ------------EKFASKIHDV-----SIGKAQYLLESDLHPQFQNLLK--KSQNNTTNP 260 + A K G+ +L + P F+N L K + ++ Sbjct: 300 VLAEVRKSPGSFAELAKKYSGDPGSAAQGGELGFLAKGATVPPFENALFALKQPGDISDV 359 Query: 261 YVTQKGVEYIAICDKRDLG------GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + G I + D + G + L+ + Q K + + + + Sbjct: 360 VESDFGFHIIKLEDVKGGGVQSLDAVKPELEREVRTQLANKKYTELADAFSNGVEDQSD 418 >gi|182419506|ref|ZP_02950757.1| foldase protein PrsA [Clostridium butyricum 5521] gi|237666290|ref|ZP_04526277.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376636|gb|EDT74209.1| foldase protein PrsA [Clostridium butyricum 5521] gi|237658380|gb|EEP55933.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 247 Score = 85.9 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 78/281 (27%), Gaps = 39/281 (13%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 M +++ G IT+ D++ IA Q+ + A + L+ + + + K G Sbjct: 1 MENKVLAIAAGHEITENDLNALIARYPEQQRAAFNSEEAKKNLLEQLISFELFNKFGQEL 60 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + + + A T + N + Sbjct: 61 ELDKTQEYKDAVASITKEVLTSMAM---------------------------NKALADVT 93 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + + + K+ + + + N +E + Sbjct: 94 VTDEDAKKYYDENKDAFSVPPTVSARHILVKTEEEAN---------KVKEEINGGLSFAD 144 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR 276 K++S G + + P+F+ + T P TQ G I + K Sbjct: 145 AAMKYSSCPSKEQGGNLGEFSKGMMVPEFEKASFEAEIGVLTEPVKTQFGYHLIIVDSKN 204 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + +K + + K + + +L+ + Sbjct: 205 EGAVKSFEEVKDSVVNELLKRNQHKKYDDLMNQLQEKYGVE 245 >gi|206977675|ref|ZP_03238567.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus H3081.97] gi|206744103|gb|EDZ55518.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus H3081.97] Length = 285 Score = 85.9 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 31/304 (10%), Positives = 76/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT D K++ K Sbjct: 4 KHIFIITALISILMLSACGQKNDSDPVATATDSTITKSDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E+I + + ++ + S D + + + Sbjct: 56 LYEMIAQDVITKKYKVSDDDVDKELQKAKNQYGDQFKNVLKNNGLKDEADF--------- 106 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 107 --KNQIKFKLAMNEAIKKSITEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLKV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK++L +K + +I + ++ A Sbjct: 205 GQISNPVTSPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERISDPIFGKKLLQNELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|229195463|ref|ZP_04322231.1| Foldase protein prsA 2 [Bacillus cereus m1293] gi|228588003|gb|EEK46053.1| Foldase protein prsA 2 [Bacillus cereus m1293] Length = 285 Score = 85.5 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 30/304 (9%), Positives = 76/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT D K++ K Sbjct: 4 KHIFIITALLSILMLSACGQKNDSDTVATATDSTITKSDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + S D + + + Sbjct: 56 LYEMMAQDVITKKYKVSDDDVDKELQKAKNQYGDQFKNVLRNNGLKDEADF--------- 106 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 107 --KNQIKFKLAMNEAIKKSITEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLKV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK++L +K + +I + ++ A Sbjct: 205 GQISNPVTSPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERISDPIFGKKLLQNELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|150025239|ref|YP_001296065.1| peptidyl-prolyl cis-trans isomerase precursor [Flavobacterium psychrophilum JIP02/86] gi|149771780|emb|CAL43254.1| Peptidyl-prolyl cis-trans isomerase precursor [Flavobacterium psychrophilum JIP02/86] Length = 459 Score = 85.5 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 36/318 (11%), Positives = 95/318 (29%), Gaps = 13/318 (4%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + + I ++ + ++ + + + + + + VI D DI K LK Sbjct: 3 INNFKMNIISSKLSFIIALLAISLGVSAQEKKQKVDGVIAVVGNYVILDSDIDKTTLELK 62 Query: 65 LQ--KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN----YFFVQHARNTGLSAE 118 Q + + +L+ + L + I + VN G + Sbjct: 63 QQGVNVKDVTRCQLLGKLLEDKLYAHHAVQDSIVIEDKEVNSKLDEQVSYMVEQLGSMDK 122 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 F + + ++ + E+ + + + + Sbjct: 123 VIQYFKKSNEQDFRTELFDIIKINKLTAEMQKKVVDAVIITPEEVRNFFKAIPKADLPVF 182 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK----FASKIHDVSIGKA 234 + I +Q QK I + + + + + K K + G Sbjct: 183 GAEMEVAQIVVKPTVSQEAKQKVIDQLKAIKKEVQEGSSFFGKAVLYSEDKGSSSNGGYY 242 Query: 235 QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293 + + +F+++ + + P++T G I + R ++ +S + + Sbjct: 243 KMDRRTQFVKEFKDVAFGLKEGEISEPFLTDFGYHIIYLEKIRGQEVDLRHI-VISPKVS 301 Query: 294 PTKIEKHEAEYVKKLRSN 311 + K E ++ +R Sbjct: 302 DEAL-KVSKEKIELIRKR 318 >gi|300715595|ref|YP_003740398.1| peptidyl-prolyl cis-trans isomerase D [Erwinia billingiae Eb661] gi|299061431|emb|CAX58543.1| Peptidyl-prolyl cis-trans isomerase D [Erwinia billingiae Eb661] Length = 623 Score = 85.5 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 32/397 (8%), Positives = 103/397 (25%), Gaps = 85/397 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + + +++ F + + +Y +NG+ I+ + Sbjct: 1 MMDNLRAASNHVVLKIILALIILSFVLTGVGNYLIGGNGDY-AAKVNGQEISRAQLENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + ++ ++ + A+ +L+ E+L + G+ + + Sbjct: 60 SNERSRQQQQLGEQFSQLAGNPAYIQQIRQQALSQLVDESLLTGYAKDLGLAISDDQIKQ 119 Query: 105 FFVQHAR---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + N + +++ G + + + L Q ++ Sbjct: 120 AIFNQSAFQTNGKFDNTKYLGLINQMGFTADQYAEALRKQLTTQQLIAAVTNTDFMLTGE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K EI ++ KN + R + Sbjct: 180 TDALAALVSQERLVREATINVAALAAKQTVSAEEIKNYYEQNKNNFMSPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEESR-----------------------------LRLPKDCNKL 219 +Q ++ + + Sbjct: 240 AASMQETASEADIQSWYDQHQADYTQPQRSRYSIIQTKTEAEAQSALDAMKKGGDFAALA 299 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ + G +L + ++ K + + + G + D + Sbjct: 300 KEKSADPISARNGGDMGWLEPDTTPDELKSAGLKEKGQLSGVIKSSVGFIVARLTDVQPQ 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + A+ ++A+ K + +K+ A Sbjct: 360 QIKPLAAVHDDIAAKVKQEKAIDAYYKLQQKVSDAAT 396 >gi|152993388|ref|YP_001359109.1| peptidyl-prolyl cis-trans isomerase [Sulfurovum sp. NBC37-1] gi|151425249|dbj|BAF72752.1| peptidyl-prolyl cis-trans isomerase [Sulfurovum sp. NBC37-1] Length = 282 Score = 85.5 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 96/307 (31%), Gaps = 41/307 (13%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K++ T V F +V+ S I T+NG+ IT D ++ + Sbjct: 1 MVKIIKTSLVAAAFMASSLVA-------SDILATVNGKNITKQDAEAFVSATAPNAHFSQ 53 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L+ A + +I + L ++ + + + F + Sbjct: 54 LDP-AQKNMITQRLIEKVLFMELAKKEGIENDPEFKKALEKIKDELAVNLWM-------- 104 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + E +K K+ +++ +++ + D K Sbjct: 105 ------------------KKQLDSIVISDSEAKDFYEKNKDKFIQKEMVQARHILVKDEK 146 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + + + E + + + + G+ + + P+F + Sbjct: 147 TAKEIIKELKPLKGEALKKKF---IELAKSKSIGPSAPKGGELGKFAKGQMVPEFSKAVW 203 Query: 252 KSQNNTT--NPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKK 307 K + + P TQ G I + DK + +K + A + K A K+ Sbjct: 204 KLEKDQITLEPVKTQFGYHIILLEDKIEAQTVPYDKVKDQIIASLKQQEFAKKVAAIAKE 263 Query: 308 LRSNAII 314 L+S A I Sbjct: 264 LKSKAKI 270 >gi|325265502|ref|ZP_08132223.1| PPIC-type PPIASE domain protein [Clostridium sp. D5] gi|324029250|gb|EGB90544.1| PPIC-type PPIASE domain protein [Clostridium sp. D5] Length = 246 Score = 85.5 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 28/281 (9%), Positives = 70/281 (24%), Gaps = 46/281 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQELIVETLKKQEIEKS 93 MS + + GE IT + + + + N + + +++LI Sbjct: 1 MSQEVLAVVAGEEITQEEFDAFMLNVPRDRQAYISNPQFRQQCLEQLIA----------- 49 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 L A+ Q F + ++ + M Sbjct: 50 -------------------LHLFAKMGGELKLDQTEKYEKFLVNAKRDILAQMAME-EIM 89 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E A + K + ++ + + E Sbjct: 90 KDITVSDDEASAYYEANKQQFSKGEMVSAKHILTDSEEKCSAVL--------ESITNGDK 141 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 + + + + G + +F++ + P +Q G I + Sbjct: 142 SFEDAARESSMCPSSENGGDLGKFGRGQMVKEFEDAAFAAEPGHVVGPVQSQFGYHLIKV 201 Query: 273 CDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 +K + + + +E +K+L+ Sbjct: 202 EEKEEAATAPLNEVIESIKMNMLQQMQSSAYSEMIKELKDK 242 >gi|161504371|ref|YP_001571483.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865718|gb|ABX22341.1| hypothetical protein SARI_02482 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 623 Score = 85.5 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 39/396 (9%), Positives = 101/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S+ +NG+ I+ Sbjct: 1 MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYL-IGGSNNYAAKVNGQEISRAQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 +++ +++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGRFDNNRYNAIVNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K + E+ + + K + R + Sbjct: 180 TDELAALVSQQRVVREATIDVNALAAKQQATDQEVSSYYDQNKTRFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEESRLRL-----------------------------PKDCNKL 219 +Q ++ + Sbjct: 240 AATMQAPVSDADIQAYYDQHLDQFTQPERHRYSIIQTKTEDDAKAVLDALNKGEDFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ES P+ +N K + + + G + D + Sbjct: 300 KEKSTDIISARNGGDMGWLEESATVPELKNAGLKEKGQISGVIKSSVGFLVARLDDVQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|238911417|ref|ZP_04655254.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 623 Score = 85.5 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 37/396 (9%), Positives = 103/396 (26%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S+ +NG+ I+ Sbjct: 1 MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYL-IGGSNNYAAKVNGQEISRAQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 +++ +++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 149 ---------KNDFMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + + E+ + + K + R + Sbjct: 180 TDELAALVSQQRVVREAVIDVNALAAKQLVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + + Sbjct: 240 AATMQAPVSDADIQAYYDQHVDQFTQPERIRYSIIQTKTEDDAKAVLDALNKGEDFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ES P+ +N K + + + G + D + Sbjct: 300 KEKSTDIISARNGGDMGWLEESATVPELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|167465904|ref|ZP_02330993.1| peptidyl-prolyl cis-trans isomerase D, putative [Paenibacillus larvae subsp. larvae BRL-230010] Length = 353 Score = 85.5 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 33/318 (10%), Positives = 95/318 (29%), Gaps = 14/318 (4%) Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-NGEVITDGDISKRIAL 62 K+ + + + +I + + + T +T G+++K I + Sbjct: 2 KMQQNKPRILNKWILALITVILTVSVLSGCGKDKGDKEVVATYKENGKVTRGELNKLIGM 61 Query: 63 -------LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 K + ++ ++++I+ + + + + V Q + Sbjct: 62 NNIFNPAYKQFAEDPAYQQSMLKQIIMFKEAEAKADDAAKKEADKKVQDQMKQMKQILDQ 121 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 L + + + L + + ++ Sbjct: 122 QEGGADKVLKDEKMELKDIENILKQNFYASKEFEKQVTEDETKKAYDENLAQEPNAYEVE 181 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKA 234 I L L+N+ + R + + + ++++ GK Sbjct: 182 DVSHILIGLKDQEGKDLRNKDEAKTRALEVKGKLEKGEDFAALAKEYSDDPGSKDKGGKY 241 Query: 235 QYLLESDL----HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 + + S + P Q +N ++P T G + + +++ + +K + + Sbjct: 242 EKVDYSQMMQFVEPFKQAAWSLEENKISDPVETDYGYHIMKVENRKKQTYDE-VKDQIRS 300 Query: 291 QNTPTKIEKHEAEYVKKL 308 Q + K+ + + V KL Sbjct: 301 QLSQKKMRDYIEQEVPKL 318 >gi|291286198|ref|YP_003503014.1| SurA domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290883358|gb|ADD67058.1| SurA domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 310 Score = 85.5 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 31/291 (10%), Positives = 89/291 (30%), Gaps = 22/291 (7%) Query: 37 AMSSRIRTTINGEVITDGDIS----KRIALLKLQKINGELEKI-------AVQELIVETL 85 + +R+ + +VIT ++ KR+ + + E+ A+ L + Sbjct: 25 EIINRVYAVVGEKVITQYELETLNPKRLQYIYKNFEGDKREEELNKYYVAALDMLTNNYV 84 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 +Q + G+ S V+ + + + S L +K + I + Sbjct: 85 IEQAAAREGVRVSSREVDGAVKEIIEKNSIDEDKLSELLAASNQTMEQYKWSIKIDILKA 144 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 ++ F K E +I + + + ++ + + ++ Sbjct: 145 RLMSTVFRPKIIITEDDIKKYVEANAAALELSDMYELRIMTVDNKEQLDKA--------- 195 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 + + KF++ + + G ++ + L + +N + + T P Sbjct: 196 LADFKDTGDFRSTVMKFSTSGNADNGGYLGWVELAFLDDEIRNTIAGKKG-LTEPLEDHG 254 Query: 266 GVEYIAICD-KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + K + + + ++ ++ + R +I Sbjct: 255 SYRVFYVEGFKNKDNVTGDKRDSIVKTLQEERSKEIFDNWLAEKRKEILIQ 305 >gi|323489424|ref|ZP_08094653.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planococcus donghaensis MPA1U2] gi|323396918|gb|EGA89735.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planococcus donghaensis MPA1U2] Length = 296 Score = 85.5 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 92/308 (29%), Gaps = 41/308 (13%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + ++ + V +S S + T + IT D+ + + + + Sbjct: 1 MKKSFLTFTLAASVLALSACSDSGDGEAIVTSDVGDITKNDLYEEMKT--------SIGE 52 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A+Q L++E + + E + D+ + E+ D+ +N Sbjct: 53 QAIQILLIEKVLADKYEVTDKEVDAEYDSN------------KEELGESFDEFLAQNNQT 100 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 ++ + + + EI + E R +L Sbjct: 101 EESYKKVIRLNLLQEKALTEGVEVTDEEIQDYY----DRQGTELNARHIL---------- 146 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 ++ ++ E+ ++ + G + + P+F+ Sbjct: 147 -VADEETANSLKKQLDEGADFAKLAEENSTDTGSGANGGNLDWFGPGAMVPEFEEAAYGL 205 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGE---IALKAYLSAQNTPTKIEKHEAE-YVKKL 308 + + P ++ G I + +KR + + K L + +K ++ V +L Sbjct: 206 EVDEISEPVASEYGFHIIQVLEKRQIEDQPALEDQKEELRTELALSKADQTTLLPKVAEL 265 Query: 309 RSNAIIHY 316 A + Sbjct: 266 MKEANVKI 273 >gi|310817118|ref|YP_003965082.1| PPIc-type PPIase domain protein [Ketogulonicigenium vulgare Y25] gi|308755853|gb|ADO43782.1| PPIc-type PPIase domain protein [Ketogulonicigenium vulgare Y25] Length = 297 Score = 85.5 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 24/287 (8%), Positives = 75/287 (26%), Gaps = 50/287 (17%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 + + ++NG IT G++ + L Q + + L+ + +++Q + + Sbjct: 33 PAAPTRDTVIASVNGTDITLGEMLLAYSALPQQYRQLPA-DVLLPSLVDQMVQQQLLAEQ 91 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + + + + V++ Sbjct: 92 VTEVPAAVEMAL------------------------------ANQRRELLSYEAVQDLLA 121 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + ++ ++ EY +L + + Sbjct: 122 DAVTDETLQAAYDRAFDGVTPGNEYSAAHILVATQEEADA-----------VIARLNAGE 170 Query: 214 KDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-----NNTTNPYVTQKGV 267 ++ + + G+ + + F N + + + + P +Q G Sbjct: 171 DFATVAQELSLDTGSGAAGGELGWFAPEMMVEPFANAVVELGEAGQFDTLSAPIESQFGF 230 Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I + + R A + + + E + L + + + Sbjct: 231 HIITVHEARPQSL--PTIAEIRTELEGQVRQDTLTEILNGLEAESEV 275 >gi|254420790|ref|ZP_05034514.1| PPIC-type PPIASE domain protein [Brevundimonas sp. BAL3] gi|196186967|gb|EDX81943.1| PPIC-type PPIASE domain protein [Brevundimonas sp. BAL3] Length = 309 Score = 85.5 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 81/307 (26%), Gaps = 51/307 (16%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKIN 69 L + + C K+ R + E + D+ + L + Sbjct: 3 LLAAVLTVAACSRGGGDDKAPEPGDRPVARVQDETVWASDVKREAVAQGLVGEGEPLDVT 62 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 +L + + E+I + L +E E+ + Sbjct: 63 SDLFRRVLDEVIDQKLLAREAERRRLDASPLAQRRL------------------------ 98 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + + + +V++ + ++ N+Q T E +R +L Sbjct: 99 ------EATRERILGDMLVESVVNGAISDQAVQTLYNEQLRLAKTSEEIRVRLILSRTKP 152 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQN 248 + + + + S G Y + + Sbjct: 153 EAEA-----------VIGILGQGASFEAVAMERSVDEATRFSGGDLGYSTLDVMPQAYAG 201 Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 L+ +T P+ T+ G + + D+R Q + + +++ Sbjct: 202 ALRDKPAGSTVGPFQTEGGWAVLRVEDRRKESP--PTLEQARPQIVRYLTYEGVRQLLEQ 259 Query: 308 LRSNAII 314 LR A + Sbjct: 260 LRGKAKV 266 >gi|222094890|ref|YP_002528950.1| peptidylprolyl isomerase [Bacillus cereus Q1] gi|221238948|gb|ACM11658.1| protein export protein prsA [Bacillus cereus Q1] Length = 285 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 30/304 (9%), Positives = 76/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT D K++ K Sbjct: 4 KHIFIITALLSILMLSACGQKNDSDTVATATDSTITKSDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + S D + + + Sbjct: 56 LYEMMAQDVITKKYKVSDDDVDKELQKAKNQYGDQFKNVLKNNGLKDEADF--------- 106 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 107 --KNQIKFKLAMNEAIKKSITEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLKV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK++L +K + +I + ++ A Sbjct: 205 GQISNPVASPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERISDPIFGKKLLQNELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|251790644|ref|YP_003005365.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Dickeya zeae Ech1591] gi|247539265|gb|ACT07886.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dickeya zeae Ech1591] Length = 626 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 36/398 (9%), Positives = 104/398 (26%), Gaps = 87/398 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + ++ F + + Y +NG+ IT + + + Sbjct: 1 MMDNLRAAANNVVLKIILALIIGSFVLTGVGDYLIRGSGDY-AAKVNGQEITRSQLEQGV 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIV-----------------ETLKK 87 + ++ +L + +L+ E +K+ Sbjct: 60 QNERSRQQEMLGDNFSALAANEGYMQQLRGQVLSQLVDETLVVQYAHNLGLNISDEQVKQ 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 ++ N ++ R GL+ + ++ FL KQ + + + Sbjct: 120 AIFSVPEFQTNNRFDNEKYLSQVRQLGLTPDAYAQFLRKQLLTQQLIRGLGNTDFVLQQE 179 Query: 148 VKNDFMLKYGN-------------------LEMEIPANKQKMKNITVREYLIRTVLFS-- 186 + N + + + E+ + K + + Sbjct: 180 LDNLVAIAAQDRTVRTATIDLGARVKSQAVSDEEVKNFYDQNKARYLAPEQFKVSYIMLD 239 Query: 187 -----------------IPDNKLQNQGFVQKRIKDAE------------ESRLRLPKDCN 217 + +++ E + Sbjct: 240 AASIMDKTKVDGNDIAAYYEQHKSEFTQPERKKYSVIQLKTEADAKAVLEQLKKGADFAA 299 Query: 218 KLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 + ++ I + G ++ + + + K + ++ + G I + D + Sbjct: 300 LAKDKSTDIVSRRNGGDLGWMDDGSTVDEIKQAGLKQKGQVSDVVKSSVGYLIIRLDDVQ 359 Query: 277 DLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++A LS + K +KL A Sbjct: 360 AQHVKELDEVRADLSEKVKREKALDAFYSLQQKLSEAA 397 >gi|224536050|ref|ZP_03676589.1| hypothetical protein BACCELL_00914 [Bacteroides cellulosilyticus DSM 14838] gi|224522333|gb|EEF91438.1| hypothetical protein BACCELL_00914 [Bacteroides cellulosilyticus DSM 14838] Length = 454 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 32/279 (11%), Positives = 91/279 (32%), Gaps = 12/279 (4%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQ 66 + +F+ + + + Y + + + E I ++ + AL + + Sbjct: 1 MKNFMN-FKFVVLCALALMTGSAVYGQDNVIDEVVWVVGDEAILKSEVEEARMSALYEGR 59 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSF 123 K +G+ + +E+ V+ L + I + V S E + Sbjct: 60 KFDGDPYCVIPEEIAVQKLFLHQAALDSIEVAESEVIQRVDQMTNMYIANIGSREKMEEY 119 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR-- 181 +K + A + + ++ + + E+ + + + ++ + Sbjct: 120 FNKTSSQIREALRENAREGLKVQRMQQKLVGEIKITPAEVRRHFKDLPQDSIPYIPTQVE 179 Query: 182 -TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLE 239 ++ P L+ V+ R+++ + + ++ ++ G+ + Sbjct: 180 VQIITQQPKIPLEEIEDVKSRLREYTDRVNKGESFSMLARLYSDDRGTAINGGEMPFTGR 239 Query: 240 SDLHPQFQN--LLKKSQNNTTNPYVTQKGVEYIAICDKR 276 L P F N + N + ++ G I + +KR Sbjct: 240 GYLDPAFANVAFNLQDPNKVSKIVESEYGFHIIQLMEKR 278 >gi|300721987|ref|YP_003711267.1| peptidyl-prolyl cis/trans isomerase [Xenorhabdus nematophila ATCC 19061] gi|297628484|emb|CBJ89049.1| peptidyl-prolyl cis-trans isomerase, for periplasmic folding of outer membrane proteins [Xenorhabdus nematophila ATCC 19061] Length = 626 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 38/401 (9%), Positives = 104/401 (25%), Gaps = 90/401 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S S +NG+ I+ ++ + Sbjct: 1 MMDNLRTAANGPVLKIVLALIILTFLLTGVTGYLSSESGSY-AAKVNGQTISRAELEQAF 59 Query: 61 ----------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 ALL ++ ++ + ++ LI L +Q K G++ + V Sbjct: 60 LQEKDVLQERLGDQFSALLSDEQQVRQIRRQSLDRLINTVLIEQYANKLGLSASDDQVAE 119 Query: 105 FFVQHA------RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY-- 156 + + +D+ + L + I +HF + + I +++ + Sbjct: 120 EIRNTSFLQTDGKFDNKKYQDYLNMLARSNISPDHFAAQVRKELINRQLMQVLMGSEIAL 179 Query: 157 -------------------------------GNLEMEIPANKQKMKNITVREYLIRTVLF 185 + E+ ++ Sbjct: 180 PTEIKQEVMLILQERTVRFATLELKSLEAQQKVTDEELKNYYSANSKRFTVPEKVKISYI 239 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA---------------------- 223 + V + + + +K++ Sbjct: 240 KMDAVDELKNITVSEADIEKYYKNNLSKYTTPEQKKYSFIQLVSDSAAKSVLDELNKGAD 299 Query: 224 ----------SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273 K G ++ ES L + ++ + + + Sbjct: 300 FSQLAAEKSTDKFSAQKGGDLGWMEESSLPNELKSANLTQKGQLSEIVKLSNAYAIFRLD 359 Query: 274 DKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 D + + + A + K + +K+ A Sbjct: 360 DIKPQVIKPLADIHAEIDKIVKQEKSVDAFYDLQRKVSDAA 400 >gi|255534611|ref|YP_003094982.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteriaceae bacterium 3519-10] gi|255340807|gb|ACU06920.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteriaceae bacterium 3519-10] Length = 467 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 27/280 (9%), Positives = 81/280 (28%), Gaps = 14/280 (5%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMS-----SRIRTTINGEVITDGDISKRIALLK 64 + + +L F + + I + E+I + DI + + Sbjct: 11 KQIMSKHIKFALLTSFILTFFGVQTHAQLKTGDLVDGIAVVVGNEIILESDIEDQANYAQ 70 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY--FFVQHARNTGLSAEDFSS 122 Q + V+ +I L E ++ + + + ++A+ G ++ + Sbjct: 71 QQGAAVADKCEFVESIINNKLLIYEAKRDTLIENRSESIKETANQKYAQILGQFPDEKTM 130 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML-----KYGNLEMEIPANKQKMKNITVRE 177 + K + + F E+ N + + V++ Sbjct: 131 LSTYKFRTSYEMKNAIEKIDTDNYYGQMKFGRITEKADVTPNEVTDFFNTYQFQLPEVKD 190 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY 236 + + + P ++ + R+ + ++ ++ + G + Sbjct: 191 EVSLSQITMYPKLTDAHKDEIIARLNKIKADIAAGESFESQARIYSEDPGSAATGGLYKN 250 Query: 237 LLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDK 275 + + F+ + + P ++ G I + K Sbjct: 251 VARGKMVKPFEAAALNLQEGELSEPVESEFGYHLIQLVKK 290 >gi|15805112|ref|NP_293797.1| peptidyl-prolyl cis-trans isomerase [Deinococcus radiodurans R1] gi|6457733|gb|AAF09662.1|AE001870_1 peptidyl-prolyl cis-trans isomerse, putative, PpiC family [Deinococcus radiodurans R1] Length = 677 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 39/322 (12%), Positives = 86/322 (26%), Gaps = 34/322 (10%) Query: 19 YFVLIIFCIVPIVSYKSW--------AMSSRIRTTINGEVITDGDIS--KRIALLKLQKI 68 + + +V ++Y+ +NG+ +T + +R + L + Sbjct: 34 LLIGLSVLLVAGMAYQFTPNVGSLFNRQEGTPVIKVNGDAVTAEQLESARRASPLLADEP 93 Query: 69 NGELEKIAVQELIVETLKKQEIEK--SGITFDSNTVNYFFVQHARNTGLSAED-FSSFLD 125 L A L+ + + + + + VN + + L+ ++ L Sbjct: 94 GSVLADDAKVYLVSQAIDRGAVLSGLKDVQVSRADVNAEVQKVRESNKLTDNKAWTDALQ 153 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 G+ D F+ + Q + + E+ A K+ E I Sbjct: 154 SNGLTDASFRTQVRQQLAYQRKTDELRKAVPAPTDAELKAYYDLNKSKYQAEPQIVGRQI 213 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 K + ++ R D L S + G L + P Sbjct: 214 V----------VTDKAKAQSLLAQARGGADFAVLASANSTENKDRGGALAPLDGNQPRPV 263 Query: 246 F---------QNLLKKSQNNTTNPYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTP 294 + + T+ + + + K + + Sbjct: 264 LQAALPTAVGEAAFRLKNGGLTDVIESGGKFYIVKVEKFLPGQPKTFEQAKTDVVSAVRQ 323 Query: 295 TKIEKHEAEYVKKLRSNAIIHY 316 K ++ LR NA + Y Sbjct: 324 QKQNAALEKWSDDLRKNAQVEY 345 >gi|226941162|ref|YP_002796236.1| peptidyl-prolyl cis-trans isomerase [Laribacter hongkongensis HLHK9] gi|226716089|gb|ACO75227.1| Probable peptidyl-prolyl cis-trans isomerase [Laribacter hongkongensis HLHK9] Length = 243 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 78/278 (28%), Gaps = 46/278 (16%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 T+NG IT+ I + + +Q+L++ TL Q+ ++G+ Sbjct: 3 ITVNGVEITEEMIKAQQDNF---ADASDPRDATIQQLVLHTLLLQKAREAGLDTSDEAA- 58 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 AI ++ ++ + + E Sbjct: 59 -----------------------------------AINALLEQSIRYEPATEATCRE--- 80 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + + +LF + D++L K E + + + + Sbjct: 81 FYDTYPERFSQGESAVASHILFPLGDDELAKVVMRGKAEGVLAEVQAEPSRFADLARVHS 140 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKRD--LG 279 + G + F++ + + P TQ G I + D+ Sbjct: 141 TCPSGREGGSLGEFGRGQMVKPFEDAVFSTPAGEITPQLVETQFGFHIIQVQDRTQGGAV 200 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 +K L T + EY+ L A I Y Sbjct: 201 AFDDIKERLQQYLTDLAARQAMHEYLSGLVDAAKIEGY 238 >gi|168465546|ref|ZP_02699428.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195631887|gb|EDX50407.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 623 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 39/396 (9%), Positives = 102/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S+ +NG+ I+ Sbjct: 1 MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYL-IGGSNNYAAKVNGQEISRAQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NNERNRMQQQLGDRYSELAANEGHMKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 +++ +++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K + E+ + + K + R + Sbjct: 180 TDELAALVSQQRVVREAVIDVNALAAKQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + + Sbjct: 240 AATMQAPVSDADIQAYYDQHVDQFTQPERIRYSIIQTKTEDDAKAVLDALNKGEDFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ES P+ +N K + + + G + D + Sbjct: 300 KEKSTDIISARNGGDMGWLEESATVPELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKPLSEVRDDIAAKVKQEKALDTYYALQQKVSDAA 395 >gi|149182999|ref|ZP_01861454.1| post-translocation molecular chaperone [Bacillus sp. SG-1] gi|148849283|gb|EDL63478.1| post-translocation molecular chaperone [Bacillus sp. SG-1] Length = 324 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 32/314 (10%), Positives = 93/314 (29%), Gaps = 40/314 (12%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + +I LT + + + + +S + +T ++ + + Sbjct: 1 MKKWI--LTMSLAAGVITLSACNNAEDNGGNSEVVAETKAGDVTKEELYTSMK-----EK 53 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + A+QEL+++ + + E + D + + D Sbjct: 54 FTPQMEQALQELVLKKVLGDKYEVTEEEVD------------EKLNEAKDQLGPQFDMFL 101 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N ++ + + E E+ + Sbjct: 102 SQYNLNEESFREYLELQLLQEKAATADIEVSEDELQEYYDN---------------WKPE 146 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL----LESDLH 243 ++ K+ ++ K + +++++ + G ++ ++ + Sbjct: 147 IEVRHILVDDEETAKEVKQKLADGAKFEDLAKEYSNDPGSAENGGSLGWVDYEGRQNFVP 206 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE-KHEA 302 + L K + P TQ G I + DK++ +K L +K+ + Sbjct: 207 EFSEALEKLKTGKVSEPVKTQYGFHIIEVTDKKEKNSFDEMKDELEKSLKLSKVTPEKIQ 266 Query: 303 EYVKKLRSNAIIHY 316 + +K++ +A + Sbjct: 267 QAMKEIVEDAGLEI 280 >gi|121997400|ref|YP_001002187.1| hypothetical protein Hhal_0599 [Halorhodospira halophila SL1] gi|121588805|gb|ABM61385.1| conserved hypothetical protein [Halorhodospira halophila SL1] Length = 524 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 23/214 (10%), Positives = 60/214 (28%), Gaps = 16/214 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I + F+ + F + Y + ++GE I I + + Sbjct: 1 MLQAIRDGIKGWIAWVIIGFIALPFIFMGGYEYFGGGQDDAVVARVDGEEIPRSQIDQAV 60 Query: 61 ALLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + Q L + A+++LI E L + K G+ V Sbjct: 61 ERQRAQLREMFGGDLPDGAFDGAALRREALEQLIDEQLLHAYVGKQGLRVTDQEVAQTIR 120 Query: 108 QHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 S + + L++ + ++ + + F Sbjct: 121 GQEIFHEGGQFSRARYQTLLERNRLTPEDYEGLVRRDLKADQFQQAVFASSISTPSQLER 180 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + ++ + I ++ + + Sbjct: 181 LVRLQDESRSFSYVEIDADRYTDEVSVDDAEVEA 214 Score = 39.3 bits (89), Expect = 0.76, Method: Composition-based stats. Identities = 8/91 (8%), Positives = 26/91 (28%), Gaps = 4/91 (4%) Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQ-KGVEYIAICDKRDLGGE- 281 S D G+ S++ + + ++ + + + R+ + Sbjct: 321 SDWIDRDGGE-GIGDLSEVVEEAFSEDVLEHGYNSDLIRVDEDRYLVVRLLEHREAEPKP 379 Query: 282 -IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + Q + E ++L + Sbjct: 380 LEEVADTIREQLRQERAADLARERAEELVAR 410 >gi|224534854|ref|ZP_03675423.1| basic membrane protein [Borrelia spielmanii A14S] gi|224513794|gb|EEF84119.1| basic membrane protein [Borrelia spielmanii A14S] Length = 336 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 102/334 (30%), Gaps = 37/334 (11%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKLQKING-- 70 + ++ L+I V I S+ + IN E+IT ++ + K + Sbjct: 1 MKSFLFLVILGTVGINSFAQ----NTPVAIINLYKNEIITKTSFDSKVDIFKKTQGRDLT 56 Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 +K +Q LI + L QE K GI + V + E ++KQG Sbjct: 57 TAEKKQVLQVLIADVLFSQEASKQGIKISDDEVMQTIRTQFGLVNFTDEQIKQMIEKQGT 116 Query: 130 GDNHFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + ++ + F E EI + K V + R Sbjct: 117 NWGELLSSMKRSLSSQKLILKQAQPRFSEVKTPSEKEIIEYYEANKTKFVNPDISRVSHV 176 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDL-- 242 + + + + R + + K+++ G +L D Sbjct: 177 FFSTKDKKRSDVLDQAKNILSQIRSKKITFEEAVRKYSNDESSKAKNGDLGFLSRDDQNA 236 Query: 243 -----HPQFQNLLKKSQNNTTNPYVTQKGVEYIAI-----------CDKRDLGGEIALKA 286 + + ++ + ++P +++G + + DK ++ +K Sbjct: 237 QNLLGSDFIKEVFNFNKGDISSPIASKEGFHIVKVTEKYAQRFLGLNDKVSPTIDLIVKD 296 Query: 287 YLSAQNTP----TKIEKHEAEYVKKLRSNAIIHY 316 + + + + + KL +A I Sbjct: 297 AIRNNMVNIQQQQIVVQVQQDVYGKLNKSANIQI 330 >gi|260062279|ref|YP_003195359.1| putative exported peptidyl-prolyl cis-trans isomerase [Robiginitalea biformata HTCC2501] gi|88783841|gb|EAR15012.1| putative exported peptidyl-prolyl cis-trans isomerase [Robiginitalea biformata HTCC2501] Length = 481 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 30/283 (10%), Positives = 79/283 (27%), Gaps = 14/283 (4%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQEIEKSGITF 97 I + VI D D+ K + LK Q + + +L+ + L + + I Sbjct: 58 DGIAAVVGDYVILDSDVEKTMIDLKNQGATDAEIDDCSLLGKLMEDRLYAHQAVQDSILV 117 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS----IWPDVVKNDFM 153 + V ++ + L + Q + ++ + Sbjct: 118 SDDEVYAQSDRYLQQLEQRLGSMEKLLQFYNKESAEDLREELFQINKLQMLSQKMQQKVV 177 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 E+ + + + + I + QK I + + Sbjct: 178 GDIKVTPEEVRQFFRSIPEDEKPVFGAELEIAQIVIKPEVPEAEKQKVIDQLNAIKADVE 237 Query: 214 KDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 + A + + G ++ +F+++ + + P+ TQ G Sbjct: 238 DNDANFRVKAILYTEDEASRSNGGMYTMTRQTQFVKEFKDVAFSLQEGEISEPFETQFGF 297 Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + + R + + + +E+ + + +R Sbjct: 298 HILMVEKIRGQELD-VRHILIRPEVPQAALEEARKK-LDTIRQ 338 >gi|257094858|ref|YP_003168499.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047382|gb|ACV36570.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 269 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 79/274 (28%), Gaps = 47/274 (17%) Query: 45 TINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 T+NG I+ + +A + Q EL+K +ELI L QE +K G+ + Sbjct: 38 TVNGVAISQTVANAFVAEQQAQGAPDSPELKKAVREELIRRELLVQEAKKLGLDKKPDVA 97 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 V++ + E Sbjct: 98 AQA------------------------------DLARQAIYIRAFVQDYVKKNPISDEQA 127 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 A ++ + EY +R +L D+ ++K K ++ Sbjct: 128 KAAYERMKSQMGSTEYKVRHILVEKEDDAKTIIVNLKK-----------GAKFDELAKQS 176 Query: 223 ASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGG 280 G + ++ F + ++ T P T G I + D R L Sbjct: 177 KDPGSKEKGGDLGWSSTANYVKPFGDAVAGLAKGKFTETPVKTDFGYHVILVEDSRPLTP 236 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + Q ++ +YV +L+ A I Sbjct: 237 --PPFDQIKPQINQRLQQEQLQKYVAELQKKAKI 268 >gi|226940617|ref|YP_002795691.1| signal peptide protein [Laribacter hongkongensis HLHK9] gi|226715544|gb|ACO74682.1| Probable signal peptide protein [Laribacter hongkongensis HLHK9] Length = 257 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 36/275 (13%), Positives = 84/275 (30%), Gaps = 48/275 (17%) Query: 46 INGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 ING I I + + Q +L + A +++ L +QE K G+ + N Sbjct: 26 INGTFIPQARIDSAVKQMTAQGQPDSPQLRQAARDRVVLTELLRQEAMKKGLDKSPDYRN 85 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + + V++ + Sbjct: 86 ELENLQSA------------------------------LLANLYVRDFMKSHPVSEADVR 115 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + +EY R +L + + ++K + + +++ Sbjct: 116 AEYDRMKVQMARKEYRARHILVPSQEEAAKVLEQLKK-----------GARFEDLARQYS 164 Query: 224 SKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRDLGG 280 + G ++ + L P+F + K ++ T P +Q G I + D ++ Sbjct: 165 IDTGSKANGGDLGFVDPAQLVPEFSGAMTKLAKGQITQTPVKSQFGWHIIQLTDTKEA-- 222 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + AQ + Y+ +L++ A + Sbjct: 223 DFPALDAVRAQLEQQIQGQRFDAYIARLKAQAKVQ 257 >gi|327398211|ref|YP_004339080.1| SurA domain-containing protein [Hippea maritima DSM 10411] gi|327180840|gb|AEA33021.1| SurA domain protein [Hippea maritima DSM 10411] Length = 287 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 91/284 (32%), Gaps = 20/284 (7%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 +I T+NG+ IT ++ ++ +N + E+I + L +Q Sbjct: 22 SEAKTVDKIIATVNGKPITTYELQNLAGFYRVNNLNT-----LLNEVIDDYLIRQYANNM 76 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 GI V + Q A LS ++F + L + I N++K+ + ++ + F+ Sbjct: 77 GIIVSDEDVEKYIQQMAEANNLSEDEFLAKLKESNIDLNYYKEGIKLRLYRIKFARRVFL 136 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + +I K+ + + + + K++ + Sbjct: 137 SSIKITDKDIENYYNLHKDKFKGKSKVLVLSIITLGDL-----ETAKKVYSLLKKGKSFE 191 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273 NK V I + LL N T+ + + + Sbjct: 192 DLLNKYSTTKESTRKVPIETLN-------PYLQKKLLSLKPNQYTDIIQSAGKFYIVKLL 244 Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + ++K + +I ++K +R+ + I + Sbjct: 245 GTEEG---ESIKDTIRNTLIDQQITAKLKSWLKMIRARSDIEVF 285 >gi|319900078|ref|YP_004159806.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacteroides helcogenes P 36-108] gi|319415109|gb|ADV42220.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacteroides helcogenes P 36-108] Length = 455 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 27/272 (9%), Positives = 86/272 (31%), Gaps = 11/272 (4%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQKINGELE 73 + + + Y + + + E I ++ + AL + +K + + Sbjct: 7 FKFVVLFALTLLAGSTVYGQDNVIDEVVWVVGDEAILKSEVEEARMSALYEGRKFDRDPY 66 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSFLDKQGIG 130 + +E+ V+ L + I V + + S E + +K Sbjct: 67 CVIPEEIAVQKLFLHQAALDSIEVAEAEVLQRVDYMTNMYISNIGSREKMEEYFNKTSSQ 126 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR---TVLFSI 187 + A + + ++ + + E+ + + ++ + ++ Sbjct: 127 IRETLRDNAREGLKVQKMQQKLVGEIKVTPAEVRRYFKDLPQDSIPYIPTQVEVQIITLQ 186 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF 246 P + V++R+++ + + ++ + G+ + L P + Sbjct: 187 PKIPQEEIEDVKRRLREYTDRVNKGESFSMLARMYSEDRGSAIRGGEIDFSGRGMLDPAY 246 Query: 247 QNLLKKSQN--NTTNPYVTQKGVEYIAICDKR 276 ++ Q+ + ++ G I + +KR Sbjct: 247 ASVAFNLQDPTKVSKIVESEYGFHIIQLIEKR 278 >gi|205351763|ref|YP_002225564.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205271544|emb|CAR36362.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326626798|gb|EGE33141.1| Peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 623 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 39/396 (9%), Positives = 102/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S+ +NG+ I+ Sbjct: 1 MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYL-IGGSNNYAAKVNGQEISRAQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNLLIDEALLDQYSRELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 +++ +++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K + E+ + + K + R + Sbjct: 180 TDELAALVSQQRVVREAVIDVNALAAKQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + + Sbjct: 240 AATMQAPVSDADIQAYYDQHVDQFTQPERIRYSIIQTKTEDDAKAVLDALNKGEDFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ES P+ +N K + + + G + D + Sbjct: 300 KEKSTDIISARNGGDMGWLEESATVPELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|219684844|ref|ZP_03539786.1| basic membrane protein [Borrelia garinii PBr] gi|219671789|gb|EED28844.1| basic membrane protein [Borrelia garinii PBr] Length = 336 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 105/334 (31%), Gaps = 37/334 (11%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKLQKING-- 70 + ++ L+I I+ I S+ + IN E+IT ++ + K + Sbjct: 1 MKSFLFLVILGIMGINSFAQ----NTPVAIINLYKNEIITKTGFDSKVDIFKKTQGRDLT 56 Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 +K +Q LI + L QE K GI + V L+ E ++KQG Sbjct: 57 AAEKKQVLQVLIADVLFSQEASKQGIKISDDEVMQTIRTQFGLVNLTDEQIKQMIEKQGT 116 Query: 130 GDNHFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + +V + F E EI + K V + R Sbjct: 117 NWGELLASMKRSLSSQKLVLKQAQPRFSEVKTPSEKEIVEYYEANKTKFVNPDISRVSHV 176 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLH- 243 + + + + R + + K+++ G +L D + Sbjct: 177 FFSTKDKKRSDVLDQAKNILSQIRSKKITFEEAVRKYSNDESSKAKNGDLGFLSRGDQNA 236 Query: 244 ------PQFQNLLKKSQNNTTNPYVTQKGVEYIAI-----------CDKRDLGGEIALKA 286 + + ++ + ++P +++G I + DK ++ +K Sbjct: 237 QNLLGADFIKEVFNFNKGDISSPIASKEGFHIIKVTEKYAQRFLGLNDKVSPTTDLIVKD 296 Query: 287 YLSAQNTPT----KIEKHEAEYVKKLRSNAIIHY 316 + + + + + KL +A I Sbjct: 297 AIRNNMVNIQQQQIVVEVQQDVYSKLNKSANIQI 330 >gi|29349256|ref|NP_812759.1| peptidyl-prolyl cis-trans isomerase [Bacteroides thetaiotaomicron VPI-5482] gi|253570398|ref|ZP_04847807.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 1_1_6] gi|298384796|ref|ZP_06994355.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp. 1_1_14] gi|29341164|gb|AAO78953.1| peptidyl-prolyl cis-trans isomerase [Bacteroides thetaiotaomicron VPI-5482] gi|251840779|gb|EES68861.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 1_1_6] gi|298261940|gb|EFI04805.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp. 1_1_14] Length = 460 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 30/280 (10%), Positives = 83/280 (29%), Gaps = 13/280 (4%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQ 66 + F+ L++ +V+Y + + + E I D+ + AL + Sbjct: 1 MKKFVN-FRFIVTLVLAVFANVVTYAQDNVIDEVVWVVGDEAILKSDVEEARMDALYNGR 59 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 + G+ + +E+ V+ L + + I + + Sbjct: 60 RFEGDPYCVIPEEIAVQKLFLHQAKLDSIEVSEAEIIQRVDMMTNMYIQQIGSKEKMEEY 119 Query: 127 QGIGDNHFKQYLAIQS---IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 ++ L + + ++ + E+ + + ++ + Sbjct: 120 FNKTATQIRETLRENARDGLTVQKMQQKLVGDIKVTPAEVRRYFKDLPQDSIPYIPTQVE 179 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLL 238 + I ++ + + R+ K A K + G+ ++ Sbjct: 180 VQIITLQPKIPIAEIEDVKRRLRDYTDRVTKGEIDFSTLARLYSEDKASAIKGGELDFMG 239 Query: 239 ESDLHPQFQNLLKKSQN--NTTNPYVTQKGVEYIAICDKR 276 L P + N+ Q+ + ++ G I + +KR Sbjct: 240 RGMLDPAYANVAFSLQDPKKVSKIVESEFGYHIIQLIEKR 279 >gi|107027409|ref|YP_624920.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia AU 1054] gi|116693880|ref|YP_839413.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia HI2424] gi|105896783|gb|ABF79947.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia AU 1054] gi|116651880|gb|ABK12520.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia HI2424] Length = 276 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 89/307 (28%), Gaps = 55/307 (17%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 +L I + +S A ++ T+NG IT D+ + Q + ++ + +L Sbjct: 10 LLTIVALAGALSGPVHAQTAETVATVNGTPITQADVDTLLR-ASGQPDSPQIRQAIKNQL 68 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I L +Q EK+ Q + Sbjct: 69 ITRVLVQQAAEKANYADKPEVKAA------------------------------MQQAKV 98 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + +++ + E + + + EY R ++ P ++ Sbjct: 99 TAEVQLYLRDHVKPEPVTDEQVKARYDELVAALGKNEYKPRVIVVKDPVAAATVLSELKA 158 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD---------LH-PQFQNLL 250 +++ + G+ ++ + L P Q L Sbjct: 159 -----------GKSFDGLARQYSLAPSRDTGGELPWVSFNTPAAEGKTAGLPLPVAQALE 207 Query: 251 KKSQNNTTNPYVTQKGV-EYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 K + TT + GV + + KR + G K L Q EK A+ + Sbjct: 208 KLTVGATTKDSIPVDGVRAIVKLDAKRPTQVPGFETAKPTLQQQLQAIAAEKASAQMIGN 267 Query: 308 LRSNAII 314 L +A I Sbjct: 268 LLKDAKI 274 >gi|51598371|ref|YP_072559.1| basic membrane protein [Borrelia garinii PBi] gi|51572942|gb|AAU06967.1| basic membrane protein [Borrelia garinii PBi] Length = 336 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 105/334 (31%), Gaps = 37/334 (11%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKLQKING-- 70 + ++ L+I I+ I S+ + IN E+IT ++ + K + Sbjct: 1 MKSFLFLVILGIMGINSFAQ----NTPVAIINLYKNEIITKTGFDSKVDIFKKTQGRDLT 56 Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 +K +Q LI + L QE K GI + V L+ E ++KQG Sbjct: 57 AAEKKQVLQVLIADVLFSQEASKQGIKISDDEVMQTIRTQFGLVNLTDEQIKQMIEKQGT 116 Query: 130 GDNHFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + +V + F E EI + K V + R Sbjct: 117 NWGELLASMKRSLSSQKLVLKQSQPRFSEVKTPSEKEIVEYYEANKTKFVNPDISRVSHV 176 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLH- 243 + + + + R + + K+++ G +L D + Sbjct: 177 FFSTKDKKRSDVLDQAKNILSQIRSKKITFEEAVRKYSNDESSKAKNGDLGFLSRGDQNA 236 Query: 244 ------PQFQNLLKKSQNNTTNPYVTQKGVEYIAI-----------CDKRDLGGEIALKA 286 + + ++ + ++P +++G I + DK ++ +K Sbjct: 237 QNLLGADFIKEVFNFNKGDISSPIASKEGFHIIKVTEKYAQRFLGLNDKVSPTTDLIVKD 296 Query: 287 YLSAQNTPT----KIEKHEAEYVKKLRSNAIIHY 316 + + + + + KL +A I Sbjct: 297 AIRNNMINIQQQQIVVEVQQDVYSKLNKSANIQI 330 >gi|242277701|ref|YP_002989830.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio salexigens DSM 2638] gi|242120595|gb|ACS78291.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio salexigens DSM 2638] Length = 633 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 50/159 (31%), Gaps = 4/159 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN-KLQNQGFVQKRIKDAEESRL 210 E++ K + R +L ++ +N ++ +K+IK Sbjct: 242 INETVTPEEIKAYYEANKETFQQEAQVNARHILITVDENASDKDVAAAEKKIKKVLAKAK 301 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269 +K++ G+ + + F+ + + P T+ G Sbjct: 302 SGQDFGKLAKKYSEGPSSSKGGELGWFGRGAMVKPFEEAAFALKKGEISEPVRTRFGWHL 361 Query: 270 IAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVK 306 I I D R+ G + +K +++ K + + Sbjct: 362 IKIDDVREAGQKDIDQVKDEINSLIAQEKAADSITDKLD 400 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 25/319 (7%), Positives = 88/319 (27%), Gaps = 19/319 (5%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + ++ +F + + + +N + + + + Sbjct: 1 MMDILRQNAQSWGIKIAFGIIIAVFIF-AFGAGGFNGNTDPVIAYVNDQPVPTQEFMQVY 59 Query: 61 ------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 L Q + E +K +++L+ + L + E EK G++ ++ ++Y + Sbjct: 60 RETAEALRAQNPNLDSDQLQSPEFKKAVLEQLVSQKLLEAEAEKLGLSVSNSELSYSISK 119 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + + ++ + A+ + Sbjct: 120 IPAFADKDGKFDMNLYQAFLQSRAMSAATFENDMRNSALI-SKLQEYVTMPVKPTEADAR 178 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + + I S D + ++ + + + + K+ + + Sbjct: 179 ALFDSAAEKVQIDYYYVSGADFVKNIKISDKQIEDFYKANPDKFTIPARSVVKYIAFTPE 238 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + E+ + + + ++ I + + A + + Sbjct: 239 ELS-----INETVTPEEIKAYYEANKETFQQEAQVNARHILITVDENASDKDVAAAEKKI 293 Query: 289 SAQNTPTKIEKHEAEYVKK 307 K + + KK Sbjct: 294 KKVLAKAKSGQDFGKLAKK 312 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 24/256 (9%), Positives = 72/256 (28%), Gaps = 6/256 (2%) Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 QK +++ + E +K D + + G++ + Sbjct: 372 QKDIDQVKDEINSLIAQEKAADSITDKLDHAIDLLASGMKLDKVSEELGIAFKKSEQATV 431 Query: 126 KQGIGDNHFKQYLAIQSIW-PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + + A I P D + + + +++ + + + Sbjct: 432 ENLSRAFGMTESAAQTIIALPKGNATDMPVAIDGGYILVEKEADVPPSLSPLKDQKQDIE 491 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + N + + S + K+ K K + ++ ++P Sbjct: 492 SFLSQQQAMNLAKAKALALMGQLSNEKTEAAALKVIKKDLKTSEPFGRD-GFVPGLGMNP 550 Query: 245 QFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIAL--KAYLSAQNTPTKIEKH 300 + ++ + + + G + ++ E K + + + Sbjct: 551 KLAQAALAAKKDQWMSEVFELPGGFIVARVDERIPPKEEAWAAQKDMVMDAIFQQRANEV 610 Query: 301 EAEYVKKLRSNAIIHY 316 ++ +LRS A + Y Sbjct: 611 FGAFLNELRSKAKVEY 626 >gi|56963292|ref|YP_175023.1| protein export protein PrsA [Bacillus clausii KSM-K16] gi|56909535|dbj|BAD64062.1| protein export protein PrsA [Bacillus clausii KSM-K16] Length = 345 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 25/304 (8%), Positives = 82/304 (26%), Gaps = 25/304 (8%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + + + + + S + + +T D+ + ++ Sbjct: 1 MKKLVLAAVGAVSLTVFAGCSDDSENAVVEIDGETALTKDDLYDSFK------ETQQAQQ 54 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 V ++ + + + +N + + +++ Sbjct: 55 QFVNQM---STALLTRASEDMDISDDEINEMIEDLKSDYNVESDEDLVNFFTNSGYPLDN 111 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 L + I P++ + + E + + R +L Sbjct: 112 IDQLKEELIVPEIAMKQLSAEGVDTSDETLQTYFEENQEQFEQITARHIL---------- 161 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF-QNLLKK 252 ++ + ++ E++++ + G + P+F + Sbjct: 162 -VEDEETANEVKDRLNDGEDFAELAEEYSTDTQSAANGGDLGTFDREQMVPEFSEVAFSL 220 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 N+ ++P +Q G I + DK L + ++ Q + + + +L Sbjct: 221 DVNDISDPVESQFGFHIIEVTDK--LDTFEDNRDFVYDQIISEQGKD-FTTVLGELIDKY 277 Query: 313 IIHY 316 + Sbjct: 278 NVKI 281 >gi|241763692|ref|ZP_04761741.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax delafieldii 2AN] gi|241367081|gb|EER61455.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax delafieldii 2AN] Length = 641 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 34/409 (8%), Positives = 98/409 (23%), Gaps = 102/409 (24%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58 M + + LL ++ F +V I ++ S + ++G I+ D Sbjct: 1 MFESIRKHSKVVM-LLLFLLIIPSFVLVGID-RSYFSQKSSVVARVDGHDISQTDWDNAH 58 Query: 59 --RIALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 ++ Q + + ++ L+ + + + +K + + + + Sbjct: 59 KVETDRIRAQSPTVDAKLLDSPQARYATLERLVRDRVFQAASQKMHLVTSDSRLARSLQE 118 Query: 109 HAR-------NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + L AE + + + QG+ F+ + V+ Sbjct: 119 IPAIAALKRPDGSLDAEAYRALVGAQGMSPEGFEANVRRDISVNQVLGGVMGTAFGTDAQ 178 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVR------------ 176 DF K + ++ A + + Sbjct: 179 VKLALDALYQRREVQVARFNPADFAGKVTPSDADLEAYYKAHTADFQQAEQATVEYVVLD 238 Query: 177 -----------------EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK- 218 Y + + + + + R + + Sbjct: 239 LDSVRAGITLNEDDLRTYYKENLTRLAGKEERRASHILINASKDAPAADREKAKARATQL 298 Query: 219 --------------LEKFASKI-HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYV 262 +K + + G + + F++ + + ++ Sbjct: 299 LEQVRKAPATFAEVAKKSSDDTGSAPAGGDLNFFGRGAMVKPFEDAAFAMKKGDISDVVE 358 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 T G I + D + L ++ ++ + Sbjct: 359 TDFGYHIIMLTDIK--TPRQPNFEELRPSMEAELKQQQAQRKFAEVAES 405 >gi|163733010|ref|ZP_02140454.1| PPIC-type PPIASE domain protein [Roseobacter litoralis Och 149] gi|161393545|gb|EDQ17870.1| PPIC-type PPIASE domain protein [Roseobacter litoralis Och 149] Length = 285 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 28/290 (9%), Positives = 78/290 (26%), Gaps = 51/290 (17%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + +++L + + + + + ++NGE I G + A L + Sbjct: 1 MQKHLRILAFSALTAAIAAPVVAQDEVTYTADTVVASVNGEDIKLGHMIAARATLDERYN 60 Query: 69 N---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 +L +++L+ +T Q IE N Sbjct: 61 QIPADQLWNGLLEQLVQQTALAQGIESLSAGEAMALDNQE-------------------- 100 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 ++ +++ + + E+ +L Sbjct: 101 --------------RSLKAAKAIEIALEQAITEEDIQAAYDAEFGNIDPEEEFNASHIL- 145 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 ++ +E+ + ++ + G+ + + P Sbjct: 146 ----------LETEEEAIAVKEAIDAGANFAATAREKSTGPSGPNGGELGWFGTGMMVPS 195 Query: 246 FQNLLKK-SQNNTTNPYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQN 292 F+ ++P TQ G I + D K+++ + + ++ Sbjct: 196 FEAATIALEVGEVSDPVETQFGWHVIVLNDTRKKEIPTLEQAREGIQSRL 245 >gi|228932540|ref|ZP_04095421.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827230|gb|EEM72983.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 285 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 82/304 (26%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++ SS T IT D K+ LK + L ++ Sbjct: 4 KHIFIITALISILTLAACGQKDSSATVATATDSTITKSDFEKQ---LKDRYGKDMLYEMM 60 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 Q++I + K E + + + ++ ++ Sbjct: 61 AQDVITKKYKVSEDDVEKEVQKAKSQYGDQFKNILKNNGLKDEA---------------- 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSVTEKDVKA--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K + Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLNV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK++L +K + +I + ++K A Sbjct: 205 GQISNPVKSPNGYHIIKLTDKKELQPYDEVKDSIRKNLEEERIANPTFSHKLLQKELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|91205713|ref|YP_538068.1| protein export protein prsA precursor [Rickettsia bellii RML369-C] gi|157826827|ref|YP_001495891.1| protein export protein prsA precursor [Rickettsia bellii OSU 85-389] gi|122425481|sp|Q1RI35|PLP_RICBR RecName: Full=Parvulin-like PPIase; AltName: Full=Peptidyl-prolyl cis-trans isomerase plp; AltName: Full=Rotamase plp; Flags: Precursor gi|91069257|gb|ABE04979.1| Protein export protein prsA precursor [Rickettsia bellii RML369-C] gi|157802131|gb|ABV78854.1| Protein export protein prsA precursor [Rickettsia bellii OSU 85-389] Length = 284 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 77/305 (25%), Gaps = 38/305 (12%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 +++ + + S S R+ T G + + I K ++ Sbjct: 1 MKKLSIVLLSVSMLSSIAFADNSDRVVATYTGGEVRESQIMKEFKPQLNLPSGETIKN-- 58 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 ++ N L ++ + Sbjct: 59 ------------------FDDFPPQDQDKLIRIYVNNILLKKEVEKSNITSSKEFQEKLE 100 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q ++++N + + NK + + +L Sbjct: 101 NAKNQLAQKELLENYVKSNLTDKMFDDEYNKYVTSLKGKEQIKVAHIL-----------V 149 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL---LESDLHPQFQNLLKK 252 +K D + + + + K + G Y+ L P+F+N Sbjct: 150 KSEKEANDLKNKLNKGADFAKLAGESSLDKASATNGGVIGYILLNQPGQLVPEFENKAFA 209 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 N + P T G I + +K+ + I K + +Y+ L + Sbjct: 210 LKVNEVSTPVKTDYGWHIIKVLEKKPVP--IPTKEEAKMTIDNVLAAEILKKYISDLEAK 267 Query: 312 AIIHY 316 A + Sbjct: 268 ADLKI 272 >gi|30261271|ref|NP_843648.1| peptidylprolyl isomerase [Bacillus anthracis str. Ames] gi|47526434|ref|YP_017783.1| peptidylprolyl isomerase [Bacillus anthracis str. 'Ames Ancestor'] gi|49184104|ref|YP_027356.1| peptidylprolyl isomerase [Bacillus anthracis str. Sterne] gi|65318541|ref|ZP_00391500.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Bacillus anthracis str. A2012] gi|165873055|ref|ZP_02217675.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0488] gi|167636140|ref|ZP_02394445.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0442] gi|167641190|ref|ZP_02399444.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0193] gi|170686825|ref|ZP_02878045.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0465] gi|170709056|ref|ZP_02899485.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0389] gi|177654451|ref|ZP_02936348.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0174] gi|190566537|ref|ZP_03019454.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis Tsiankovskii-I] gi|227815990|ref|YP_002815999.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. CDC 684] gi|229603142|ref|YP_002865693.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0248] gi|254682666|ref|ZP_05146527.1| peptidylprolyl isomerase [Bacillus anthracis str. CNEVA-9066] gi|254725460|ref|ZP_05187242.1| peptidylprolyl isomerase [Bacillus anthracis str. A1055] gi|254734085|ref|ZP_05191798.1| peptidylprolyl isomerase [Bacillus anthracis str. Western North America USA6153] gi|254740272|ref|ZP_05197964.1| peptidylprolyl isomerase [Bacillus anthracis str. Kruger B] gi|254753611|ref|ZP_05205647.1| peptidylprolyl isomerase [Bacillus anthracis str. Vollum] gi|254758708|ref|ZP_05210735.1| peptidylprolyl isomerase [Bacillus anthracis str. Australia 94] gi|46396833|sp|Q81TU1|PRSA2_BACAN RecName: Full=Foldase protein prsA 2; Flags: Precursor gi|30254885|gb|AAP25134.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. Ames] gi|47501582|gb|AAT30258.1| peptidylprolyl isomerase PrsA [Bacillus anthracis str. 'Ames Ancestor'] gi|49178031|gb|AAT53407.1| protein export protein prsA [Bacillus anthracis str. Sterne] gi|164711210|gb|EDR16767.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0488] gi|167510831|gb|EDR86223.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0193] gi|167528494|gb|EDR91259.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0442] gi|170126011|gb|EDS94909.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0389] gi|170669348|gb|EDT20091.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0465] gi|172080735|gb|EDT65817.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0174] gi|190562089|gb|EDV16057.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis Tsiankovskii-I] gi|227006723|gb|ACP16466.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. CDC 684] gi|229267550|gb|ACQ49187.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0248] Length = 285 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 29/304 (9%), Positives = 75/304 (24%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + +++ SS T IT D K++ K Sbjct: 4 KHIFIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E+I + + ++ + S D + + + Sbjct: 56 LYEMIAQDVITKKYKVSDDDVDKEVQKAKSQYGDQFKNVLKNNGLKDEADF--------- 106 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 107 --KNQIKFKLSMNKAIKQSVTEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDTGASFEELAKQESQDLLSKEKGGDLGYFHSGAMTPEFETAAYKLKI 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 ++P + G I + K+DL +K + + + ++ A Sbjct: 205 GQISDPVQSPNGYHIIKLTGKKDLKPYDEVKNSIRKNLEEERTADPIFGKKLLQSELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|160890578|ref|ZP_02071581.1| hypothetical protein BACUNI_03021 [Bacteroides uniformis ATCC 8492] gi|270295715|ref|ZP_06201915.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317479880|ref|ZP_07938997.1| ppic-type ppiase domain-containing protein [Bacteroides sp. 4_1_36] gi|156859577|gb|EDO53008.1| hypothetical protein BACUNI_03021 [Bacteroides uniformis ATCC 8492] gi|270273119|gb|EFA18981.1| conserved hypothetical protein [Bacteroides sp. D20] gi|290769660|gb|ADD61440.1| putative protein [uncultured organism] gi|316903954|gb|EFV25791.1| ppic-type ppiase domain-containing protein [Bacteroides sp. 4_1_36] Length = 455 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 30/272 (11%), Positives = 89/272 (32%), Gaps = 11/272 (4%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQKINGELE 73 + + +V Y + + + E I ++ + AL + +K + + Sbjct: 7 FKFVILFALTLLVGSTVYGQDNVIDEVVWVVGDEAILKSEVEEARMSALYEGRKFDRDPY 66 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSFLDKQGIG 130 + +E+ V+ L + I + V + S E + +K Sbjct: 67 CVIPEEIAVQKLYLHQAALDSIEVSESEVIQRVDYMTNMYIANIGSREKMEEYFNKTSSQ 126 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR---TVLFSI 187 + A + + ++ + + E+ + + ++ + ++ Sbjct: 127 IRETLRENAREGLKVQKMQQKLVGEIKITPAEVRRYFKDLPQDSIPYIPTQVEVQIITQQ 186 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF 246 P L+ V++R+++ + + ++ + G+ ++ L P + Sbjct: 187 PKVPLEEIEDVKRRLREYTDRVNKGESFSMLARLYSEDRGSAMRGGEIEFSGRGMLDPAY 246 Query: 247 QNLLKKSQN--NTTNPYVTQKGVEYIAICDKR 276 N+ Q+ + ++ G I + +KR Sbjct: 247 ANVAFNLQDPSKVSKIVESEYGFHIIQLIEKR 278 >gi|256827570|ref|YP_003151529.1| parvulin-like peptidyl-prolyl isomerase [Cryptobacterium curtum DSM 15641] gi|256583713|gb|ACU94847.1| parvulin-like peptidyl-prolyl isomerase [Cryptobacterium curtum DSM 15641] Length = 404 Score = 84.7 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 29/327 (8%), Positives = 88/327 (26%), Gaps = 35/327 (10%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA-------------- 61 +T + S S SS + T+NG I++ ++ + Sbjct: 11 VTGALSAACMLGIVACSSSSSTASSGVAATVNGTEISEQTVTDFVQNFRETQGLTDEDTW 70 Query: 62 ---LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 + K ++ + + L +Q E++G++ V+ + Sbjct: 71 GKWMAKSSMTPSQVRDQIIDYFVGIDLTRQAAEENGVSVSDEDVDAQVASMKA-NYSDDD 129 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + S L + G + ++ + + + + E + + Sbjct: 130 AWQSALKQAGTTEEGYRDSVHNAMLENALKEKVTAESTAGASDEELLTYAQQYARSFSGA 189 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 + + D+ Q + + + ++++ G + Sbjct: 190 KKSSHILFASDDSDTAQKVLDQINSGQI-------SFEDAAKEYSIDTVSAQDGGNVGWD 242 Query: 238 LESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY--------L 288 L + + + + + ++ G+ I D + E+ + Sbjct: 243 LLNRFVQPYTDALTNLDKGQVSGLVMSDYGIHIIKCTDVYEAPDEVTEIDQVPVELIDYI 302 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +++ + A I Sbjct: 303 RKMVESNNETQAYKQWMADYKEKATIE 329 >gi|309388299|gb|ADO76179.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halanaerobium praevalens DSM 2228] Length = 343 Score = 84.7 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 98/348 (28%), Gaps = 53/348 (15%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS---------SRIRTTINGEVITDGDISK----- 58 K II I+ + + I +N E I+ ++ + Sbjct: 3 FKRNILVITGIIMLILAVPAAAQDIQEVNETVTEADQEIAAYVNSEEISMQELEQFAGVR 62 Query: 59 ----------------RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 + Q++ E +K+ +++LI L QE + + + Sbjct: 63 NILMQILQTNQEFGSVMLQTEAGQQVVDEFQKLKLEQLITNKLMVQEAKSRKLKVSDEEM 122 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV--------KNDFML 154 N F Q + + L+ + + + + + + + Sbjct: 123 NKIFDQQIQALKQQNQLSEEQLEAAIQKQGFESMKEYKELFFENNMNGFLINKLREEVVN 182 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 K E E+ Q K E + D + + + Sbjct: 183 KVKVSEEEVKDYYQNNKKQFESEAEKKVSHILFDDQAKAEKVLAEIK---------AGAD 233 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESD---LHPQFQNLLKKSQNNTT-NPYVTQKGVEYI 270 +K ++ G Y+ ++ +K T P TQ G I Sbjct: 234 FAEMAKKHSTGPTADKGGNLGYVSANERGLDQTFRDAAMKLEVGEITNEPVKTQFGFHLI 293 Query: 271 AICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R+ G +KA + + K + ++V+ LR A I Sbjct: 294 KVTDYREAGVRDFEEVKAQIESNLKNKKKSQAFQDFVENLREKAEIDI 341 >gi|156741601|ref|YP_001431730.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseiflexus castenholzii DSM 13941] gi|156232929|gb|ABU57712.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseiflexus castenholzii DSM 13941] Length = 337 Score = 84.7 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 32/310 (10%), Positives = 92/310 (29%), Gaps = 28/310 (9%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-----------E 71 I ++ ++S + S+ ++ +T ++ +RI ++ + Sbjct: 6 AIAAVLVVLSLAACGAGSQTVARVDNVTLTRQELDQRIDRIEKGLQQQAGTGFPLPSRLD 65 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 +E+ V + I + L + GIT VN + + + ++ +G Sbjct: 66 IEQELVSQFIDQQLTLGLARQRGITVSDADVNEQIERFRQQIQTGSGISLEQAIQEQLGL 125 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + + ++ T R + TV + + Sbjct: 126 PGESSPEFRLFVTYFLARQKLGETLVSEVDIRQRISDEVMADTQRMVDVATVAHILVATE 185 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL 250 + + +++ + + ++ + + G + + P+F + Sbjct: 186 DEAKQVIER--------LDKGEDFADLAKELSQDPGSAENGGVYENIQRGQFVPEFDKAM 237 Query: 251 KK--SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALK--AYLSAQNTPTK---IEKHEA 302 + TT P TQ G I + + + A + + + Sbjct: 238 FEDLQPGETTKTPVQTQFGWHVIRLVSRGEAPALDPANAPAVIEQRVAQELPFEQQSALE 297 Query: 303 EYVKKLRSNA 312 ++ + A Sbjct: 298 RLLQSEKQKA 307 >gi|118474611|ref|YP_891704.1| foldase protein PrsA [Campylobacter fetus subsp. fetus 82-40] gi|118413837|gb|ABK82257.1| foldase protein PrsA [Campylobacter fetus subsp. fetus 82-40] Length = 269 Score = 84.7 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 89/297 (29%), Gaps = 39/297 (13%) Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVE 83 I+ + + ++++ + T+NG+ ITD D++ + + + +++K + +I Sbjct: 5 VILALSLAAAVSLNAAVLATVNGQNITDEDLAPVLGPHGSETSNVPADMKKNLLDRVIER 64 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 L + +K GI D ++ Sbjct: 65 KLMLDQAKKDGIEKDDEFKK-------------------------------VVKELEDNV 93 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++ E + ++ K+ V + + K Sbjct: 94 AINIWMKKQFDAIKVDEKKAKDFYEQNKDKFVVPAQAKAKHILVETEKEAADIIKSLNGL 153 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPY 261 + + + K K V+ G+ + ES + F + + T P Sbjct: 154 KGAALDKKFSEIAKE--KSIDKSSAVNGGELGWFGESQMVASFSKAAFGLKKGEITNKPV 211 Query: 262 VTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ G I D +D KA + Q + + V L+ +A I Y Sbjct: 212 KSEFGYHVILKEDMKDKSAVGFDKAKANIENQMKSEEFRTVMQKKVSDLKKDAKIEY 268 >gi|239814796|ref|YP_002943706.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Variovorax paradoxus S110] gi|239801373|gb|ACS18440.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Variovorax paradoxus S110] Length = 636 Score = 84.7 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 36/395 (9%), Positives = 100/395 (25%), Gaps = 98/395 (24%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALL 63 F + + + ++ F + + Y+ + ++G+ IT + R+ Sbjct: 5 FRKYNKIVMIFLFLLIIPSFVLFGVERYQGSGGEVK-VARVDGQNITRPEWDAQHRLETD 63 Query: 64 KLQKINGE----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH---- 109 ++++ + + ++ ++ + + KS +T ++ F Q Sbjct: 64 RIRQQSPNVDPTLLESDVMRYATLERMVRDRVLAAAAAKSNVTISEERLSRIFAQDTGLA 123 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-------------------- 149 A T D SF G ++ + + ++ Sbjct: 124 AFRTPDGKFDRESFQRVTGRTPEQYEASMRAELATQQMLLGVTGTAFTPPALAAATINAF 183 Query: 150 -------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 F K + ++ A + + + Sbjct: 184 YDRREIQVARFSPESFASKVTVSDADVEAYYKAHTAQFQAPEQASIEYLVLDLEAAKKNI 243 Query: 197 FVQKRIKD----------------------------------------AEESRLRLPKDC 216 V + AE+ + K Sbjct: 244 SVNEADLKTYYEQNTARFGTKEERRASHILITAPASAPAADRAKAKAKAEQLLAEVKKAP 303 Query: 217 NKLEKFASKI-----HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 A K G ++ + F++ L + + ++ T+ G I Sbjct: 304 ATFADVARKNSQDPGSAEKGGDLDFVTRGAMVKPFEDALFALKKGDISDVVETEFGYHII 363 Query: 271 AICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAE 303 + D + + ++A + + + + A+ Sbjct: 364 RLADIKPAVVPPFEQVRATIENEVRSQQATQEFAK 398 >gi|224532128|ref|ZP_03672760.1| basic membrane protein [Borrelia valaisiana VS116] gi|224511593|gb|EEF81999.1| basic membrane protein [Borrelia valaisiana VS116] Length = 336 Score = 84.7 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 104/334 (31%), Gaps = 37/334 (11%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKLQKING-- 70 + ++ LII V I S+ + IN E+IT ++ + K + Sbjct: 1 MKSFLFLIILGTVGINSFAQ----NTPVAIINLYKNEIITKTGFDSKVDIFKKTQGRDLT 56 Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 +K +Q LI + L QE K GI + V L+ E ++KQG Sbjct: 57 VAEKKQVLQVLIADVLFSQEASKQGIKISDDEVMQTIRTQFGLVNLTDEQIKQMIEKQGT 116 Query: 130 GDNHFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + +V + F E EI + K V + R Sbjct: 117 NWGELLSSMKRSLSSQKLVLKQAQPKFSEVKTPSEKEIIEYYEANKTKFVNPDIARVSHV 176 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLH- 243 + + + + R + + K+++ G +L D + Sbjct: 177 FFSTKDKKRSDVLDQAKNILSQIRSKKITFEEAVRKYSNDESSKAKNGDLGFLSRGDQNA 236 Query: 244 ------PQFQNLLKKSQNNTTNPYVTQKGVEYIAI-----------CDKRDLGGEIALKA 286 + + ++ + ++P +++G I + DK ++ +K Sbjct: 237 QNLLGADFMKEVFNFNKGDISSPIASKEGFHIIKVTEKYAQRFLGLNDKVSPTTDLIVKD 296 Query: 287 YLSAQNTP----TKIEKHEAEYVKKLRSNAIIHY 316 + + + + + KL +A I Sbjct: 297 AIRNNMINVQQQQIVVQVQQDVYGKLNKSANIQI 330 >gi|213022578|ref|ZP_03337025.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 335 Score = 84.7 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 89/287 (31%), Gaps = 21/287 (7%) Query: 47 NGEV---ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 N EV IT + + + L Q + L + E S D+ Sbjct: 50 NNEVRRRITV--LPQEVDALAKQIGTQNDASTELN-LSHILIALPENPTSEQVNDAQRQA 106 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-----------F 152 V+ ARN + ++ Q + IQ + + Sbjct: 107 ESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPI 166 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 G +++ + + ++I+V E R +L +Q K + A + + Sbjct: 167 RSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMN-DQQARLKLEEIAADIKSGK 225 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270 ++++ G + P F++ L K + P + G I Sbjct: 226 TTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLI 285 Query: 271 AICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D R + + A K K + A ++++ R++A + Sbjct: 286 ELLDTRKVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKI 332 >gi|317154730|ref|YP_004122778.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio aespoeensis Aspo-2] gi|316944981|gb|ADU64032.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio aespoeensis Aspo-2] Length = 632 Score = 84.7 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 65/231 (28%), Gaps = 6/231 (2%) Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 +Q + + V+Y A D + + F ++ + Sbjct: 175 EQARQIFDWVGEEVRVDYILSSPAAFAPQVRVDAKEVDEFYASNQDKFMVPEQVRIRYLA 234 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---FSIPDNKLQNQGFVQKRIK 203 D + + EI A +E ++ + + + Q +K+I Sbjct: 235 FTPKDLAARQEVSDPEIDAYFAANSASMKQEEQVKASHLLIMTSDSDSDEEQAEARKKID 294 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYV 262 A + + G + D+ P+F+ + + P Sbjct: 295 AAYAKAKAGGDFATLARQNSEGPSAAGGGDLGWFGRGDMVPEFEQAAFSTPKGQVSEPVR 354 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 TQ G I + D+++ + E+ AE V L A+ Sbjct: 355 TQFGWHIIYVEDRKEAR--ELALDEVRKDIAIAIAEEKAAERVTDLLDQAM 403 Score = 72.4 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 24/224 (10%), Positives = 65/224 (29%), Gaps = 14/224 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + S +I + ++++F +S I T+N ++IT + Sbjct: 1 MLEIMRENASGWIVKILFGIIIVVFVFAFGMSGLETGQ-DPILATVNDQIITRAEFEDAF 59 Query: 61 AL------------LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 Q + + +++ + ELI L E + GI+ V + Sbjct: 60 QRAAEGVRTANPDVTPAQLQDPQFKQMVLGELINSRLLLHEAARLGISASDEEVFAAITR 119 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + + +++ + P + Sbjct: 120 QSYFWNQAGAFDRDIYMAALRSIRMTPALFEANFK-NEMIAGKVQDMVRKTGVATPEQAR 178 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 ++ + E + +L S Q + ++ + ++ + Sbjct: 179 QIFDWVGEEVRVDYILSSPAAFAPQVRVDAKEVDEFYASNQDKF 222 >gi|251778113|ref|ZP_04821033.1| foldase protein PrsA [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082428|gb|EES48318.1| foldase protein PrsA [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 247 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 26/281 (9%), Positives = 74/281 (26%), Gaps = 39/281 (13%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 M +++ + G I D D+ + ++ + + L+ + + + + G Sbjct: 1 MENKVLAIVAGNEIKDKDLDAVLNRYPQERRAMFQGEQGREALLEQVVAFELMRNFGKEL 60 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + + + + N + Sbjct: 61 KIDETEEYKNLVEGLAKEAL---------------------------TQLAINKVLADVT 93 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + ++ ++ V + + + E Sbjct: 94 VTDEDVKKYYDDNASMFVNPPTVSAKHILVKTEEEATSIK---------EEIENGLAFEE 144 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276 +K+++ G + + P+F+ + + + P TQ G I + DK Sbjct: 145 AAKKYSTCPSKEQGGSLGNFGKGAMVPEFEKVAFESEVGIVSEPVKTQFGYHLILVEDKA 204 Query: 277 DLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +K + Q + + E +K+L + Sbjct: 205 ESTTVPFEQVKDAVLRQLINERQQNKYLEMIKQLSDKYGVE 245 >gi|238754239|ref|ZP_04615596.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia ruckeri ATCC 29473] gi|238707486|gb|EEP99846.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia ruckeri ATCC 29473] Length = 627 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 34/399 (8%), Positives = 105/399 (26%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + + +++ F + + Y + +NG+ I+ + + + Sbjct: 1 MMDNLRAAANNVVLKIILALIMLSFILTGVGGYLIGGSNDY-AAKVNGQEISRAQLEQSM 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +L + + +LI L Q ++ G++ V Sbjct: 60 QSERSRLQQQLGEQFSVLAGNEGYMQQLRQQILGQLINNMLLDQYAKQLGLSASDEQVKD 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY--------------------------L 138 Q + D + +L+ Q+ Sbjct: 120 SIRQLPYFQTDNKFDNNKYLELVNRMGYTPDQFAQIQRQQLINQQLLQAFSETGFALPAE 179 Query: 139 AIQSIWPDVVKNDF----------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 A + + + K + E+ A ++ +N + ++ + Sbjct: 180 AQAMSELILQQREVRLATLDLKALQAKQTVTDEELKAYYEQNRNSFIAPEEMKISFIEMD 239 Query: 189 DNKLQNQGFVQKRIKDAEESRLR-------------------------------LPKDCN 217 +Q + V + + R Sbjct: 240 AAAMQEKITVTEEDIATYYEQHRSSFTQPERRNYSVIQFKNEADAKTALAELKNGADFTT 299 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ ++ I + G+ +L + + + ++ + G + + D + Sbjct: 300 LAKEKSTDIISRKNGGELGWLEPETTADELKQANLTEKGQLSDVVKSSVGYLIVRLNDIK 359 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + L+ + K +K+ A Sbjct: 360 PEQVKPLSEVHDALATKVKQEKAVDAYYALQQKVSEAAT 398 >gi|196230323|ref|ZP_03129186.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chthoniobacter flavus Ellin428] gi|196225920|gb|EDY20427.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chthoniobacter flavus Ellin428] Length = 318 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 35/316 (11%), Positives = 89/316 (28%), Gaps = 18/316 (5%) Query: 18 TYFVLIIFCIVPIVSY-KSWAMSSRIRTTINGEVITDGDIS-----------KRIALLKL 65 L F + + + + +N ++IT + + L Sbjct: 5 LLLSLTCFSLCFAPALLAKEEVLDGLAAVVNSDIITYKQVRDLTAAKEQQAHDTLQDQAL 64 Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-HARNTGLSAEDFSSFL 124 K E+ AV ELI L Q+ + G + + ++ + F L Sbjct: 65 TKRIKEVRTAAVNELIDRQLILQDFKSKGYSIPEHFIDDEIEALIKSRFHGNRPAFLRAL 124 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 QG+ F + I ++ K +E + + L Sbjct: 125 QAQGLSLQRFSEIQRDNIIVQEMRKQAAKGATEQPTVEKVNAAYRPSAALASSQPEQMRL 184 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 I + +K +++ + + + ++ + G+ ++ ++ Sbjct: 185 RVIMVHGNDEGQ--RKFMENIRQKLTEGAEFGDLARMYSEDSSQETYGEWGWIDRRTINE 242 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK--AYLSAQNTPTKIEKHE 301 + T+ + K+ + + ++ Sbjct: 243 TLTKAAFALKVGETSPIIEQGGNFYLLNCAAKKGAVTRTVNELGGNTPTTLVKGERQQMV 302 Query: 302 AEYVKKLRSNAIIHYY 317 +++++KLR A I + Sbjct: 303 SDWLQKLRRKAYIKVF 318 >gi|229823923|ref|ZP_04449992.1| hypothetical protein GCWU000282_01227 [Catonella morbi ATCC 51271] gi|229786656|gb|EEP22770.1| hypothetical protein GCWU000282_01227 [Catonella morbi ATCC 51271] Length = 325 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 25/320 (7%), Positives = 77/320 (24%), Gaps = 40/320 (12%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + F ++ + + + A + T+ + IT D+ ++ Sbjct: 1 MKKTTLNRM--------MAFASVLVLSGAVANTATVAYAQDNIATVGDQTITKEDLYNQM 52 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 ++ +I++ + + + Sbjct: 53 KKDAGLVT--------LRSMILQKVLEMNASNAADLKKQAEDEVA------KQIDKVGGE 98 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 F + + Q ++ + + I Sbjct: 99 EKFQELLTYQKLGSVEDFKNQIYIRNLFNEVVSKQIDQSDATIEDYYNNT---------- 148 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 + ++ KD + ++ G Sbjct: 149 ----YQPKMEAQHILVDTEEEAKDIISKLDAGENFDELAKTYSKDGSAQQGGLLSPFTSG 204 Query: 241 DLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI- 297 + +F++ + ++ T P ++ G I + + +K + + +K+ Sbjct: 205 QMVKEFEDGVKGQANGEYTKTPVKSKFGYHIIKTINNGEKKPFADIKDDVKKEYLDSKLK 264 Query: 298 -EKHEAEYVKKLRSNAIIHY 316 +K + + KL A + Sbjct: 265 DQKFSYKIIGKLIEAAKVQI 284 >gi|218888106|ref|YP_002437427.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759060|gb|ACL09959.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 630 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 16/194 (8%), Positives = 46/194 (23%), Gaps = 8/194 (4%) Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT---VRE 177 ++ + ++ I + E + A Sbjct: 208 EQIAERYNENMDAWRNPQRISLDAVTLTPASLATSVEIPESAVAAFYADNAETYFVVPER 267 Query: 178 YLIRTVLFSIPDN-KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQ 235 R +LF + + + +D + + K + G Sbjct: 268 VHARHILFMAQEGASKDEDAAARAKAEDVIAQLKKGKDFASLAAKLSDDKGSGAQGGDLG 327 Query: 236 YLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC--DKRDLGGEIALKAYLSAQN 292 + + + P F+ + P + G I + + + ++ + + Sbjct: 328 WFTKGQMVPPFEEAAFALKPGEISAPVRSAFGWHVIKMEAHETQRTRALDEVRGEIRQRL 387 Query: 293 TPTKIEKHEAEYVK 306 K + E + Sbjct: 388 GEEKASERMHEALD 401 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 38/324 (11%), Positives = 85/324 (26%), Gaps = 27/324 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56 M + + + ++++F + S + SS T+N + I + Sbjct: 1 MLELIRAHAQSWGVKIAFGIIILVFVFWGVGSMHN--SSSGALATVNKKPILIQEFGREY 58 Query: 57 SKRIALLKLQ--------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 +++ L+ + L++ +Q +I E L E + G++ + Sbjct: 59 ERQVETLRSRYPGITAEDMKQMGLKRQVLQAMITERLLADEAARIGLSVSPVELRRSIES 118 Query: 109 HARNTG----LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 AE + S L Q F+ + + + E Sbjct: 119 ITAFRNGDGRFDAEVYRSVLKGQQTSPGRFEDGIRRDMLLQKLRDRVAAPASVTDEEARA 178 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + T+ L L + +R + ++ + Sbjct: 179 LFDYGRERRTIEYVLF--PLEDYVLKVTPTDEQIAERYNENMDAWRNPQRISLDAVTLTP 236 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 S+ + ES + + + + P + + A Sbjct: 237 ASLATSV----EIPESAVAAFYADNAETY---FVVPERVHARHILFMAQEGASKDEDAAA 289 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKL 308 +A K K A KL Sbjct: 290 RAKAEDVIAQLKKGKDFASLAAKL 313 >gi|329962620|ref|ZP_08300568.1| PPIC-type PPIASE domain protein [Bacteroides fluxus YIT 12057] gi|328529651|gb|EGF56549.1| PPIC-type PPIASE domain protein [Bacteroides fluxus YIT 12057] Length = 455 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 31/272 (11%), Positives = 85/272 (31%), Gaps = 11/272 (4%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQKINGELE 73 + + + Y + + + E I ++ + AL +K + + Sbjct: 7 FKFVVLFALTLLAGSTVYGQDNVIDEVVWVVGDEAILKSEVEEARMSALFDGRKFDRDPY 66 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSFLDKQGIG 130 + +E+ V+ L + I N V + S E + +K Sbjct: 67 CVIPEEIAVQKLFLHQAALDSIEVSENEVIQRVDYMTNMYIANIGSREKMEEYFNKTSSQ 126 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR---TVLFSI 187 + A + + ++ + + E+ + ++ + ++ Sbjct: 127 IRETLRENAREGLKVQKMQQKLVGEIKVTPAEVRRYFKNRPQDSIPYIPTQVEVQIITLQ 186 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF 246 P L+ V+KR+++ + + ++ + G+ ++ L P + Sbjct: 187 PKIPLEEIEDVKKRLREYTDRINKGESFSMLARMYSEDRGSAMRGGEIEFSGRGMLDPAY 246 Query: 247 QN--LLKKSQNNTTNPYVTQKGVEYIAICDKR 276 N + N + ++ G I + +KR Sbjct: 247 ANVAFNLQDPNKVSKIVESEYGFHIIQLIEKR 278 >gi|228913840|ref|ZP_04077465.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845779|gb|EEM90805.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 285 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 29/304 (9%), Positives = 75/304 (24%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + +++ SS T IT D K++ K Sbjct: 4 KHIFIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E+I + + ++ + S D + + + Sbjct: 56 LYEMIAQDVITKKYKVSDDDVDKEVQKAKSQYGDQFKNVLKNNGLKDEADF--------- 106 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 107 --KNQIKFKLSMNKAIKQSVTEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFHSGAMTPEFETAAYKLKI 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 ++P + G I + K+DL +K + + + ++ A Sbjct: 205 GQISDPVQSPNGYHIIKLTGKKDLKPYDEVKNSIRKNLEEERTADPIFGKKLLQSELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|207724194|ref|YP_002254592.1| peptidyl-prolyl cis-trans isomerase [Ralstonia solanacearum MolK2] gi|206589405|emb|CAQ36367.1| peptidyl-prolyl cis-trans isomerase protein [Ralstonia solanacearum MolK2] Length = 648 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 44/419 (10%), Positives = 99/419 (23%), Gaps = 107/419 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M V T + L+ V F + Y + S + VIT ++ R+ Sbjct: 1 MLDFVRTH-RRLMFLVLLILVFPSFVFFGVQGYSRFMDGSHDAAKVGDTVITTSELDARV 59 Query: 61 -------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 Q ++ + + +I + + E ++ ++ V Sbjct: 60 REQTERLRQMLGGQYDPRQFEGPQMRRDVLDGIIQQRMMVNEASRTNLSVADTKVRETIE 119 Query: 108 Q-------HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------- 149 Q + + + L QG+ F L + + + + Sbjct: 120 QIPAVAQLRKPDGKFDTDAYIKLLAAQGMTPEQFDARLRSELVLQQIPQSIVSSAFVPKS 179 Query: 150 ----------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 D+ K + I A + ++ Sbjct: 180 LVDRLIEARDQQREVQALLLKPADYASKVAVDDKAIQAYYDAHQQEFAVPEQVKAEYVVF 239 Query: 188 PDNKLQNQG----FVQKRIKDAEESRLRLPKDCNKL------------------------ 219 + Q K D +R + + Sbjct: 240 SGEDMMKQIPVTPEQLKEYYDQNAARFKTEEQRRAAHILIKLPDNAKPADKDAAKKRAEE 299 Query: 220 ------------EKFASKIHDV-----SIGKAQYLLESDLHPQFQNLLK--KSQNNTTNP 260 + A K G+ +L + PQF + L K + ++ Sbjct: 300 VLAEVRKTPGNFAELAKKYSGDPGSAAQGGELGFLAKGATVPQFDSALFALKQPGDISDV 359 Query: 261 YVTQKGVEYIAICDKRD------LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + G I + + + + L+ + Q K + + + + Sbjct: 360 VQSDFGFHIIKLEEVKGGGVQSLEAVKPELEREVRTQLANKKYTELADAFSNGVEDQSD 418 >gi|188589997|ref|YP_001922502.1| foldase protein PrsA [Clostridium botulinum E3 str. Alaska E43] gi|188500278|gb|ACD53414.1| foldase protein PrsA [Clostridium botulinum E3 str. Alaska E43] Length = 247 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 25/281 (8%), Positives = 74/281 (26%), Gaps = 39/281 (13%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 M +++ + G I D D+ + ++ + + L+ + + + + G Sbjct: 1 MENKVLAIVAGNEIKDKDLDAVLNRYPQERRAMFQGEQGREALLEQVVAFELMRNFGKEL 60 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + + + + N + Sbjct: 61 KIDETEEYKNLVEGLAKEAL---------------------------TQLAINKVLADVT 93 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + ++ N+ + + + + + Sbjct: 94 VTDEDVKKYYDDNANMFINPPTVSAKHILVKTEEEATSIKEEIA---------NGLAFEE 144 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276 +K+++ G + + P+F+ + + + P TQ G I + DK Sbjct: 145 AAKKYSTCPSKEQGGSLGNFGKGAMVPEFEKVAFESEVGIVSEPVKTQFGYHLILVEDKA 204 Query: 277 DLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +K + Q + + E +K+L + Sbjct: 205 ESTTVPFEQVKDAVLRQLINERQQNKYLEMIKQLSDKYGVE 245 >gi|187776514|ref|ZP_02992987.1| hypothetical protein CLOSPO_00005 [Clostridium sporogenes ATCC 15579] gi|187775173|gb|EDU38975.1| hypothetical protein CLOSPO_00005 [Clostridium sporogenes ATCC 15579] Length = 247 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 30/282 (10%), Positives = 78/282 (27%), Gaps = 39/282 (13%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 M + I +NG+ ITD D+ I ++ + ++LI + + Sbjct: 1 MENNIVAIVNGQEITDKDVDNTILSFPKERQTYLNTEKGREDLIKQMI------------ 48 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 E ++ + + + + +++ Sbjct: 49 ------------------DFELSYNYAKDMKVDETEDFKKQLEATKKQLLIQVAVSNVLA 90 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + K+ + + +++ Sbjct: 91 RATVAEEEAKKYYEENKEEFRTQELITARHILVDSEDEANS------IYGKIKNGLDFSE 144 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR 276 EK++ G + + P+F+ + + + T TQ G I + + R Sbjct: 145 AAEKYSKCPSKAQGGSLGTFTKGQMVPEFEKAVFEAEVDKVTEAVKTQFGYHLIIVDNIR 204 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + +KA ++ + K + E+ + LR + Sbjct: 205 ESMIKPFDEVKAMINNKLLQEKQNQQYNEFTQNLRDKYTVEI 246 >gi|15594454|ref|NP_212242.1| basic membrane protein [Borrelia burgdorferi B31] gi|195941846|ref|ZP_03087228.1| basic membrane protein [Borrelia burgdorferi 80a] gi|216264206|ref|ZP_03436198.1| basic membrane protein [Borrelia burgdorferi 156a] gi|218249766|ref|YP_002374636.1| basic membrane protein [Borrelia burgdorferi ZS7] gi|221217448|ref|ZP_03588919.1| basic membrane protein [Borrelia burgdorferi 72a] gi|223889066|ref|ZP_03623655.1| basic membrane protein [Borrelia burgdorferi 64b] gi|224532923|ref|ZP_03673533.1| basic membrane protein [Borrelia burgdorferi WI91-23] gi|224533973|ref|ZP_03674557.1| basic membrane protein [Borrelia burgdorferi CA-11.2a] gi|225549343|ref|ZP_03770316.1| basic membrane protein [Borrelia burgdorferi 94a] gi|225549885|ref|ZP_03770847.1| basic membrane protein [Borrelia burgdorferi 118a] gi|226320700|ref|ZP_03796258.1| basic membrane protein [Borrelia burgdorferi 29805] gi|226321981|ref|ZP_03797506.1| basic membrane protein [Borrelia burgdorferi Bol26] gi|2687994|gb|AAC66497.1| basic membrane protein [Borrelia burgdorferi B31] gi|215980679|gb|EEC21486.1| basic membrane protein [Borrelia burgdorferi 156a] gi|218164954|gb|ACK75015.1| basic membrane protein [Borrelia burgdorferi ZS7] gi|221192726|gb|EEE18942.1| basic membrane protein [Borrelia burgdorferi 72a] gi|223885315|gb|EEF56416.1| basic membrane protein [Borrelia burgdorferi 64b] gi|224512122|gb|EEF82513.1| basic membrane protein [Borrelia burgdorferi WI91-23] gi|224512809|gb|EEF83176.1| basic membrane protein [Borrelia burgdorferi CA-11.2a] gi|225369576|gb|EEG99027.1| basic membrane protein [Borrelia burgdorferi 118a] gi|225370201|gb|EEG99641.1| basic membrane protein [Borrelia burgdorferi 94a] gi|226232571|gb|EEH31325.1| basic membrane protein [Borrelia burgdorferi Bol26] gi|226233916|gb|EEH32639.1| basic membrane protein [Borrelia burgdorferi 29805] gi|312148208|gb|ADQ30867.1| basic membrane protein [Borrelia burgdorferi JD1] gi|312149453|gb|ADQ29524.1| basic membrane protein [Borrelia burgdorferi N40] Length = 336 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 102/334 (30%), Gaps = 37/334 (11%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKLQKI---N 69 + ++ +I V I S+ + IN E+IT ++ + K + Sbjct: 1 MKSFLFWVILGTVGISSFAQ----NTPVAIINLYKNEIITKTGFDSKVDIFKKTQGRDLT 56 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 +K +Q LI + L QE K GI + V + E ++KQG Sbjct: 57 DAEKKQVLQVLIADVLFSQEASKQGIKISDDEVMQTIRTQFGLVNFTDEQIKQMIEKQGT 116 Query: 130 GDNHFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + +V + F E EI + K V + R Sbjct: 117 NWGELLSSMKRSLSSQKLVLKQAQPKFSEIKTPSEKEIVEYYEANKTKFVNPDISRVSHI 176 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLH- 243 + + + + R + + K+++ G +L D + Sbjct: 177 FFSTKDKKRSDVLDQAKNILSQIRSKKITFEEAVRKYSNDESSKAKNGDLGFLSRGDQNA 236 Query: 244 ------PQFQNLLKKSQNNTTNPYVTQKGVEYIAI-----------CDKRDLGGEIALKA 286 + + ++ + ++P +++G + + DK ++ +K Sbjct: 237 QNLLGADFVKEVFNFNKGDISSPIASKEGFHIVKVTEKYAQRFLGLNDKVSPTADLIVKD 296 Query: 287 YLSAQNTP----TKIEKHEAEYVKKLRSNAIIHY 316 + + + + + KL +A I Sbjct: 297 AIRNNMINVQQQQIVVQVQQDMYGKLNKSANIQI 330 >gi|78356452|ref|YP_387901.1| peptidyl-prolyl cis-trans isomerse domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218857|gb|ABB38206.1| peptidyl-prolyl cis-trans isomerase domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 629 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 19/153 (12%), Positives = 43/153 (28%), Gaps = 4/153 (2%) Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ-GFVQKRIKDAEESRLRLP 213 + + K R +L + + +K+I + E + Sbjct: 244 SVSDDRIAAYYEDNKESFRQEERVHARHILVLADAGASEEKVAAAEKKINELYERIRKGA 303 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAI 272 ++ + G + + P+F+ + T P TQ G I + Sbjct: 304 DFAKVAKEASEGPSAPLGGDLGWFGRGQMVPEFEQAAFAAAAGQVTAPVRTQFGFHIIKV 363 Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305 +K + + + + E+ E V Sbjct: 364 EEKENARIRT--LDEVHDEISHRLAEEAALEKV 394 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 25/214 (11%), Positives = 60/214 (28%), Gaps = 18/214 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT----DGDI 56 M + + + + ++I+F + S S + + IT + Sbjct: 1 MLDSIRQNAQSWGVKIAFGLIIIVFVFWGVGSM--DNQPSNVVAKVGKTSITVNAFAREY 58 Query: 57 SKRIALLKLQ--------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 +++ L++ Q L+ + ++I E L Q+ EK G+ + + Sbjct: 59 EQQVELVRAQFPDVTSEDLKQAGLKMRVLNQMISEVLLVQQAEKQGLEVSPAELKLRIAE 118 Query: 109 HARNT----GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 E + L QG ++ + + + M E Sbjct: 119 IPVFNDADGNFDGERYKQVLAAQGTTPGAYEDKIRRSMLAQKMRDFITMPAAVTAEEAKA 178 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + ++ L + + Q Sbjct: 179 MFLYSAERRSMDYVLFAAENYLDQVKPGEEQISA 212 >gi|301052807|ref|YP_003791018.1| peptidylprolyl isomerase [Bacillus anthracis CI] gi|300374976|gb|ADK03880.1| peptidylprolyl isomerase [Bacillus cereus biovar anthracis str. CI] Length = 285 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 29/304 (9%), Positives = 74/304 (24%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + +++ SS T IT D K++ K Sbjct: 4 KHIFIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E+I + + ++ + S D + + + Sbjct: 56 LYEMIAQDVITKKYKVSDDDVDKEVQKAKSQYGDQFKNVLKNNGLKDEADF--------- 106 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 107 --KNQIKFKLSMNKAIKQSVTEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFHSGAMTPEFETAAYKLKI 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 ++P + G I + K+DL +K + + ++ A Sbjct: 205 GQISDPVQSPNGYHIIKLTGKKDLKPYDEVKNSIRKNLEEERTADPIFGKNLLQSELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|170736766|ref|YP_001778026.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia MC0-3] gi|254249421|ref|ZP_04942741.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia cenocepacia PC184] gi|124875922|gb|EAY65912.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia cenocepacia PC184] gi|169818954|gb|ACA93536.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia MC0-3] Length = 276 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 89/307 (28%), Gaps = 55/307 (17%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 +L I + +S A ++ T+NG IT D+ + Q + ++ + +L Sbjct: 10 LLTIVALAGALSGPVHAQTAETVATVNGTPITQADVDTLLR-ASGQPDSPQIRQAIKNQL 68 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I L +Q EK+ Q + Sbjct: 69 ITRVLVQQAAEKANYADKPEVKAA------------------------------MQQAKV 98 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + +++ + E + + + EY R ++ P ++ Sbjct: 99 TAEVQLYLRDHVKPEPVTDEQVKARYDELVAALGKNEYKPRVIVVKDPVAAATVLSELKA 158 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL---------LESDLH-PQFQNLL 250 +++ + G+ ++ + L P Q L Sbjct: 159 -----------GKSFDGLARQYSLAPSRDTGGELPWVSFNTPAAEGKTARLPLPVAQALE 207 Query: 251 KKSQNNTTNPYVTQKGV-EYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 K + TT + GV + + KR + G K L Q EK A+ + Sbjct: 208 KLTVGATTKDSIPVDGVRAIVKLDAKRPTQVPGFETAKPTLQQQLQAIAAEKASAQMIGN 267 Query: 308 LRSNAII 314 L +A I Sbjct: 268 LLKDAKI 274 >gi|126698956|ref|YP_001087853.1| putative peptidyl-prolyl isomerase [Clostridium difficile 630] gi|254974902|ref|ZP_05271374.1| putative peptidyl-prolyl isomerase [Clostridium difficile QCD-66c26] gi|255092291|ref|ZP_05321769.1| putative peptidyl-prolyl isomerase [Clostridium difficile CIP 107932] gi|255100375|ref|ZP_05329352.1| putative peptidyl-prolyl isomerase [Clostridium difficile QCD-63q42] gi|255306317|ref|ZP_05350488.1| putative peptidyl-prolyl isomerase [Clostridium difficile ATCC 43255] gi|255314029|ref|ZP_05355612.1| putative peptidyl-prolyl isomerase [Clostridium difficile QCD-76w55] gi|255516709|ref|ZP_05384385.1| putative peptidyl-prolyl isomerase [Clostridium difficile QCD-97b34] gi|255649808|ref|ZP_05396710.1| putative peptidyl-prolyl isomerase [Clostridium difficile QCD-37x79] gi|255655366|ref|ZP_05400775.1| putative peptidyl-prolyl isomerase [Clostridium difficile QCD-23m63] gi|306519909|ref|ZP_07406256.1| putative peptidyl-prolyl isomerase [Clostridium difficile QCD-32g58] gi|115250393|emb|CAJ68215.1| putative peptidyl-prolyl isomerase [Clostridium difficile] Length = 251 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 31/281 (11%), Positives = 77/281 (27%), Gaps = 46/281 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIA----LLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 M ++ T+ + IT+ DI + +Q E +K + +L+ + L + ++ Sbjct: 1 MEKKVLATVGEKEITNIDIENALKSLDPYQAMQFKTEEGKKHLLNDLVNQELFFLDAKE- 59 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + +++ N + Sbjct: 60 ------------------------------EKLDEEEIFKLEMKKIEENVLKQFAINKVL 89 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 E E + K+ + + ++ + Q + ++ Sbjct: 90 SSVNVTEDEKVKFFEANKSSFSKPESATAKHILVDSDEKAKEILAQIKSEEI-------- 141 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAI 272 + K +S G + P+F+ ++ + P TQ G I + Sbjct: 142 SFEDAALKHSSCPSKDMGGDLGTFGRGQMVPEFEEAVFSMAKGEVSEPVKTQFGYHIIKL 201 Query: 273 CDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 D ++ +KA + K + + L + Sbjct: 202 EDLQESTESTFDEVKAEVEKSLLYQKQNEVYGNKINALNAK 242 >gi|313885841|ref|ZP_07819584.1| PPIC-type PPIASE domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|312924745|gb|EFR35511.1| PPIC-type PPIASE domain protein [Porphyromonas asaccharolytica PR426713P-I] Length = 472 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 30/284 (10%), Positives = 90/284 (31%), Gaps = 17/284 (5%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIE 91 + ++ + T+ E I +I + ++ Q + G + ++L V+ L + + Sbjct: 38 SAGSVVDEVIWTVGDEPILKSEIENQKLYMRSQGMPLEGNPDCYLTEQLAVQMLFLNQAK 97 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV---V 148 I+ D+ V+ F + + + ++ I ++ ++ + Sbjct: 98 IDSISVDNTKVDRFVDNFMESLVQQIGSRERLEEYFNRPYSSIREQQRIMAVNNEIVRQM 157 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + EI + ++ ++ + + + + + Sbjct: 158 QQKIIQGVAVTPTEIRSYYAQIPQDSLPYIPDVVEVQVLRITPDIELAAIDQIKEQLRSY 217 Query: 209 RLRLPKDCNKLEKFASKIHDVS-----IGKAQYLLESDLHPQFQNLLKKSQN--NTTNPY 261 + A S G+ ++ S L P+F ++ + + Sbjct: 218 SDDIVAGRRDFSTIARLYSQDSRTSLRGGEYGFVARSSLEPEFAQVVFALSDTKQVSPII 277 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAE 303 T G + + +KRD ++ + P K+++ + Sbjct: 278 RTATGYHIVQLIEKRD---NTINFRHILLKPSVAPDKLQQAVNK 318 >gi|145298875|ref|YP_001141716.1| peptidyl-prolyl cis-trans isomerase D [Aeromonas salmonicida subsp. salmonicida A449] gi|142851647|gb|ABO89968.1| peptidyl-prolyl cis-trans isomerase D [Aeromonas salmonicida subsp. salmonicida A449] Length = 637 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 29/406 (7%), Positives = 99/406 (24%), Gaps = 95/406 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + + +++ F + + SY + + T+NG I+ + Sbjct: 2 MLDKLREGAQGKVAKVILGLIILSFALAGVGSYLN-GPARTAPATVNGNDISSAALENAY 60 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + + + LI + L + + G+ + Sbjct: 61 RNERARMESQMGESFSQLAANPDYMKQFRRGVLDRLIDQALFDSKARELGLRVSDEQIKQ 120 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + A + + + + + + G+ F+ L + ++ Sbjct: 121 AIIAMPEFAEDGKFNNDRYLQLIRRAGMTPEMFRDSLRQDMVRQQLMGALLGTEFALKGE 180 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRT------ 182 ++ + E+ + + + ++ Sbjct: 181 AEQLDKLYNQTRDLRLVRLAAAAYLGDVQVSDQEVEQYYKTNSARFMNDEKVKVDYLLLD 240 Query: 183 -------------------------------VLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + +++ ++ + Sbjct: 241 AANLGKDIKVTEQDAKDYYDQHQDLFQRAERRHVAHILIPFGKDEKAAEKLAGELLTKAK 300 Query: 212 LPKDCNKLEK--FASKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGV 267 D L K + G+ + + + P F+ + +N + G Sbjct: 301 GGDDFAALAKANSSDTFSAKKGGELDWFEKGVMDPAFEQAAFALNKAGDLSNLVKSPFGF 360 Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 I + + + + +K + + + + A Sbjct: 361 HVIKLLGV-EAAQTKPFVDVMGETIRRLQADKAKELFFAEQQKMAD 405 Score = 35.8 bits (80), Expect = 9.2, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 12/30 (40%) Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 L Q K + + +LR A I Y+ Sbjct: 600 LQGQLGQGKAQVSYKSLIDELRKAAKIEYF 629 >gi|320107420|ref|YP_004183010.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Terriglobus saanensis SP1PR4] gi|319925941|gb|ADV83016.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Terriglobus saanensis SP1PR4] Length = 661 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 29/269 (10%), Positives = 72/269 (26%), Gaps = 10/269 (3%) Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 T D K I ++ + V + + + SG + + Sbjct: 159 TTADFEKEIKEDMERRRLRQFVTAGVN--VNDNAVRSAYLLSGTKVKFDYAMISPEDVKK 216 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 N + + + + + + K + E+ + + Sbjct: 217 NVTSTDSELQKYFNDNKARYAKAVAEARKVTYVAVAADSLPGGKPQVSDAEVQSYYSQHA 276 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKI-H 227 + E +R I + A++ + + + + Sbjct: 277 DQYKVEEQVRVRHILISVPPGADAKVDAAAKTKAQDLLTKIRAGGNFADLAKANSDDPGS 336 Query: 228 DVSIGKAQYLLE-SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE--IA 283 + G+ ++ + P FQ T++ TQ G I +++D + Sbjct: 337 KGTGGELGWVKSNGQMVPAFQTAAMALKAGQTSDLVKTQFGYHIIQATERQDAHVKPLTE 396 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + + K E +V L + A Sbjct: 397 VASQIRPMLEQQKAAAAEQSFVTALSNEA 425 Score = 43.9 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 22/240 (9%), Positives = 60/240 (25%), Gaps = 11/240 (4%) Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 + +E+ + A GL + L Q + + Sbjct: 400 QIRPMLEQQKAAAAEQSFVTALSNEAAKQGLDKAAAAHHLTAQTTDYIAQDGVVNGVADS 459 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 +++ F K G+ + + V F + + + + ++ Sbjct: 460 SQLLQAAFAAKKGDAPKAVATGEGMAIFQVVDIQPAHAPTFDLWKSHVADDYAAEQVPTM 519 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVS---------IGKAQYLLESDLHPQFQNLLKKSQN 255 + +L + +L +++ + ++ Sbjct: 520 MQAKLTKLSERAKQLNDLKKAAVEMNIPVKTSDLVGRDGNVPELGAMSGGASVAFTLAKG 579 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALK--AYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + P + + + DK++ E K +K + A Y+ L Sbjct: 580 AVSAPIDASRSGAVLQVVDKQEPTTEDIAKNFDKTKNDLLESKRNEVFALYMGTLMDQYK 639 >gi|219685287|ref|ZP_03540106.1| basic membrane protein [Borrelia garinii Far04] gi|219673060|gb|EED30080.1| basic membrane protein [Borrelia garinii Far04] Length = 336 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 106/334 (31%), Gaps = 37/334 (11%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKLQKING-- 70 + ++ L+I I+ I S+ + IN E+IT ++ + K + Sbjct: 1 MKSFLFLVILGIMGINSFAQ----NTPVAIINLYKNEIITKTGFDSKVDIFKKTQGRDLT 56 Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 +K +Q LI + L QE K GI + V L+ E ++KQG Sbjct: 57 AAEKKQVLQVLIADVLFSQEASKQGIKISDDEVMQTIRTQFGLVNLTDEQIKQMIEKQGT 116 Query: 130 GDNHFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + + +V + F E EI + K V + R Sbjct: 117 NWSELLASMKRSLSSQKLVLKQAQPRFSEVKTPSEKEIVEYYEANKTKFVNPDISRVSHI 176 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLH- 243 + + + + R + + K+++ G +L D + Sbjct: 177 FFSTKDKKRSDVLDQAKNILSQIRSKKITFEEAVRKYSNDESSKAKNGDLGFLSRGDQNA 236 Query: 244 ------PQFQNLLKKSQNNTTNPYVTQKGVEYIAI-----------CDKRDLGGEIALKA 286 + + ++ + ++P +++G I + DK ++ +K Sbjct: 237 QNLLGADFIKEVFNFNKGDISSPIASKEGFHIIKVTEKYAQRFLGLNDKVSPTTDLIVKD 296 Query: 287 YLSAQNTPT----KIEKHEAEYVKKLRSNAIIHY 316 + + + + + KL +A I Sbjct: 297 AIRNNMVNIQQQQIVVEVQQDVYSKLNKSANIQI 330 >gi|89901031|ref|YP_523502.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodoferax ferrireducens T118] gi|89345768|gb|ABD69971.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodoferax ferrireducens T118] Length = 640 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 37/403 (9%), Positives = 98/403 (24%), Gaps = 101/403 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58 M V + ++ ++ F + I Y + + + IT G+ Sbjct: 1 MFDFVRKHTKIMMAVMFL-LIIPSFVLFGIDGYNRSRDAGSVVARVGSHDITQGEWDAVH 59 Query: 59 --RIALLKLQKIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 L+ N + ++ L+ + + Q +K +T + + Sbjct: 60 KSEADRLRASMPNLDAKLLDSPQARYATLERLVRDRVLAQAADKFKLTTSDARLARNLHE 119 Query: 109 HAR-------NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV-------------- 147 + + L + + + QG+ F+ + V Sbjct: 120 NPSIAALRQPDGKLDMDRYRQLVGSQGLTPEGFEARVRQDLSVRQVEAGVGETGFAAASV 179 Query: 148 -------------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 DF K + E+ A + + + + Sbjct: 180 ADVALNAFFEKREVQIASFTAADFASKVSPTDAELNAFYKANQALFQSPEHASIEYVVLD 239 Query: 189 DNKLQNQGFVQKRIKDA----------------------------------------EES 208 + ++ + + + +E Sbjct: 240 MDSVKKSIVISEADMKSYYEQNAERLSGKEERRASHILITAAKDAPAADRQKAKARADEL 299 Query: 209 RLRLPKDCNKLEKFASKI-----HDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYV 262 + + + A K + G + + F++ + + + + Sbjct: 300 LKTVRQSPDSFADVAKKNSQDTGSAANGGDLDFFTRGAMVKPFEDAVFAMKKGDISEVVE 359 Query: 263 TQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAE 303 + G I + D + L+A + A + + AE Sbjct: 360 SDFGYHIIKLTDIKKPVQRSFEELRAGIEADLKTQQAQARFAE 402 >gi|237807859|ref|YP_002892299.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Tolumonas auensis DSM 9187] gi|237500120|gb|ACQ92713.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Tolumonas auensis DSM 9187] Length = 638 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 40/402 (9%), Positives = 108/402 (26%), Gaps = 95/402 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + + + +++ F + + SY + S+ ++ EVI+ + + Sbjct: 2 LMDKLRDGAQGRVAKIIFWLIILSFALAGVGSYINSPASNDP-AVVDDEVISAQTLEQSY 60 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +L+K ++ L+ ++L + +G+ V Sbjct: 61 QNERARMQAQYGEAAAQLLDNPQYLAQLKKSVLERLVNQSLLNNKALNAGVRLSDEQVKD 120 Query: 105 FFVQH---ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 Q + + F++ L + G F + I + Sbjct: 121 VIRQMPEFQTDNKFDNQKFTTALSRVGYTPESFANSMRQDLIRQYWLDGILTTEFALPAE 180 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 F + + ++ A + N ++ ++ + Sbjct: 181 VSRLDALYQQKRDVKMITIPVETFSKQITVTDQDVDAFYKAHSNEFMQSEQVKLNYIVLN 240 Query: 189 DNKLQNQGF-------------------------------------VQKRIKDAEESRLR 211 L QK+ + Sbjct: 241 SADLAKTIQPADSELKAYYQQHAELFTEPARRKVSHILITDKDDNAAQKKADELLAKLKS 300 Query: 212 LPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVE 268 + + A + G+ + + + P F+ +N + + G Sbjct: 301 GTDFTQLAKTESADTLSARQGGELDWFEKGVMDPAFETAAFALNQKNELSAVVKSAFGYH 360 Query: 269 YIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 I + DK+D + + + K ++ A+ +KL Sbjct: 361 IIKLLDKQDAIETPYDKVVTIVRQKFVDEKAKELFADQQQKL 402 Score = 40.0 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 27/264 (10%), Positives = 67/264 (25%), Gaps = 9/264 (3%) Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 ++ ++ I Q+ + E K+ ++ D N + Sbjct: 367 KQDAIETPYDKVVTIVRQKFVDEKAKELFADQQQKLSDIGFENPDSLDAVAEGLKLPLQK 426 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + F+ Q + + Q+ + + + ++ + + + Sbjct: 427 TDFIAAQQLPAEINVPAVKEQAFAEKLRDENTNSEVISVSDTVAVMLHVIDYKPSSAKPL 486 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN--------KLEKFASKIHDVSIG 232 V + +K +A ++ + + K Sbjct: 487 SEVKDLVVAKLRAT-KAAEKAHTEAMALLEKVKAGQSIDEQLTKLNAKVEEKKGLARFGT 545 Query: 233 KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292 L + + K + V + + L+ LS Q Sbjct: 546 DIPAPLAQAVFKLAKPADKVVSAGLYADEEGNQSVLVLEKVISAPETADAPLQQGLSEQL 605 Query: 293 TPTKIEKHEAEYVKKLRSNAIIHY 316 K E+ +++LR A I Y Sbjct: 606 VKLKQEETYGALIEELRQKAKIKY 629 >gi|281423984|ref|ZP_06254897.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella oris F0302] gi|281401909|gb|EFB32740.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella oris F0302] Length = 480 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 31/289 (10%), Positives = 81/289 (28%), Gaps = 17/289 (5%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQE 89 S ++ + + E I D+ + +++ + G + +++ V+ L + Sbjct: 46 SVPEHSVIDEVVWVVGDEPIMKSDVEQMRLQGEMEGMKWGGNPDCRIPEQIAVQKLFLHQ 105 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 I + + Q S + QG + + L +++ Sbjct: 106 AALDSIEVTESDIAQTVEQQINYWINSVGSREKLEEYQGKSLSQIRSDLHDDVKNSKMIQ 165 Query: 150 N---DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M ++ + + ++ + + Q + + Sbjct: 166 QMKRKIMSDVTVTPADVRRYFKNLPEDSIPFVPTEVEVEILVKKPRIPQSEINRVKDQLR 225 Query: 207 ESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKKSQN--NTTN 259 R+ K A G+ Y L P F ++ + + Sbjct: 226 SFTDRVTKGETSFSTLARLYSEDPGSARQGGEMDYAGRGTLDPAFASVAFNLTDPKKISK 285 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++ G I + DKR G+ ++ P + + + +L Sbjct: 286 IVESEFGYHIIQLVDKR---GDKVKVRHIL--LKPKVSAEDLNKALGRL 329 >gi|253990887|ref|YP_003042243.1| peptidyl-prolyl cis-trans isomerase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782337|emb|CAQ85501.1| Peptidyl-prolyl isomerase [Photorhabdus asymbiotica] Length = 623 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 34/399 (8%), Positives = 95/399 (23%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y + +NG+ I+ + + Sbjct: 1 MMDNLRTAANSPVLKIVLALIILSFVLTGVGGYLTSGT-DSYAAEVNGQTISRAQLEQAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLK------------------ 86 + ++ ++ LI L Sbjct: 60 QQERNMLQEQLGDKFSVLASNEQSMKQIRSQVLERLINNALIDQYSQELGLSASDEQVKD 119 Query: 87 ------------KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 K + K + + ++ + L + I Sbjct: 120 AIRNISYFQINGKFDNNKYLDFLNRSNLSPDILAEQTRQNLINQQLIMAFSGSEIVLPSE 179 Query: 135 KQYLAIQSIWPDVVK------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + A + V+ ++ + ++ KN + ++ + Sbjct: 180 VKLNAELFLQQRAVRLATLELKKVHVRQEVTDKDLQDYYNVNKNSFIAPEEVKISYIRMD 239 Query: 189 ------------DNKLQNQGFVQKRIKDAEESRLRLPKDCN------------------- 217 + KR E+ + L + Sbjct: 240 AADEMDKVSVTSVDVDSYYEHNLKRYTQPEQKKYSLVQLATEVEAKIVLDELNKGADFGK 299 Query: 218 -KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 EK K + G+ ++ E L + + K + ++ G + D + Sbjct: 300 LAAEKSTDKFSAKNKGEIGWMEEDSLPEEMKKANLKEKGQISSVIKVPNGFAIFHLDDVK 359 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +++ + K +K+ A Sbjct: 360 PQITKPLSEVRSEIEKTIKQEKAVDAFYALQQKVSDAAT 398 >gi|149194292|ref|ZP_01871389.1| CELL BINDING FACTOR 2 PRECURSOR MAJOR ANTIGEN PEB4A [Caminibacter mediatlanticus TB-2] gi|149135467|gb|EDM23946.1| CELL BINDING FACTOR 2 PRECURSOR MAJOR ANTIGEN PEB4A [Caminibacter mediatlanticus TB-2] Length = 292 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/283 (12%), Positives = 84/283 (29%), Gaps = 44/283 (15%) Query: 40 SRIRTTINGEVITDGDISKRIALLK--LQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 + + +NG+ IT +I+ + + + +L V++L+ + Sbjct: 43 NTVVAEVNGKKITVAEINAYLQGITGDKRIKLQDLPAQHVKKLVKD-------------- 88 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 A+ + + K +N + A + D+ Sbjct: 89 ------------------YADTLTVYEKKAKSIENTPQFKAAKMKLAVDMWLKKEFDNIK 130 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + E A +K K++ + + K + + + K Sbjct: 131 ISDKEAKAFYEKNKDVFFKSTP--QIKARHILVKDEKLAKKLINELKGLKGKALEEKFAE 188 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAICDK 275 +K++ V G+ + + P+F + T P T+ G I + K Sbjct: 189 LAKKYSIGPSKVQGGELGWFSPKQMVPEFAKAAESLKPGEITLKPVKTRFGYHIILVEGK 248 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +K + K++K ++ L+ I + Sbjct: 249 KSNTYIPYEKVKDQIIGYLKNQKLKKE----LETLKKQEKIKF 287 >gi|16078059|ref|NP_388876.1| molecular chaperone lipoprotein [Bacillus subtilis subsp. subtilis str. 168] gi|221308834|ref|ZP_03590681.1| molecular chaperone [Bacillus subtilis subsp. subtilis str. 168] gi|221313157|ref|ZP_03594962.1| molecular chaperone [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318081|ref|ZP_03599375.1| molecular chaperone [Bacillus subtilis subsp. subtilis str. JH642] gi|221322356|ref|ZP_03603650.1| molecular chaperone [Bacillus subtilis subsp. subtilis str. SMY] gi|131027|sp|P24327|PRSA_BACSU RecName: Full=Foldase protein prsA; Flags: Precursor gi|39782|emb|CAA40543.1| 33kDa lipoprotein [Bacillus subtilis subsp. subtilis str. 168] gi|2226124|emb|CAA74418.1| 33kDa lipoprotein [Bacillus subtilis subsp. subtilis str. 168] gi|2633331|emb|CAB12835.1| molecular chaperone lipoprotein [Bacillus subtilis subsp. subtilis str. 168] Length = 292 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 89/304 (29%), Gaps = 44/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + I++ + + + + + +T G++ + Sbjct: 1 MKKIAIAAITATSILALSACSSGDKEVIAKTDAGDVTKGELYTNMK--------KTAGAS 52 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +L+ E + + + D + L+KQ D Sbjct: 53 VLTQLVQEKVL---------DKKYKVSDKEIDNKLKEYKTQLGDQYTALEKQYGKDY--- 100 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 L Q + + + + +I + +K ++ Sbjct: 101 --LKEQVKYELLTQKAAKDNIKVTDADIKEYWEGLKGKIRASHI---------------L 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL-LESDLHPQF-QNLLKKS 253 +K ++ E+ + K + +++++ G + E + F + K Sbjct: 144 VADKKTAEEVEKKLKKGEKFEDLAKEYSTDSSASKGGDLGWFAKEGQMDETFSKAAFKLK 203 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSN 311 ++P TQ G I ++R G +K L ++ K+ E V+K+ Sbjct: 204 TGEVSDPVKTQYGYHIIKKTEER--GKYDDMKKELKSEVLEQKLNDNAAVQEAVQKVMKK 261 Query: 312 AIIH 315 A I Sbjct: 262 ADIE 265 >gi|170759119|ref|YP_001785376.1| peptidil-prolyl isomerase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169406108|gb|ACA54519.1| peptidil-prolyl isomerase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 247 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 32/282 (11%), Positives = 76/282 (26%), Gaps = 39/282 (13%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 M + I +NG+ ITD D+ I ++ + +ELI + + Sbjct: 1 MENNIVAIVNGQEITDRDVDNTILSFPKERQTYLNTEKGREELIKQMI------------ 48 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 E + + + + +++ Sbjct: 49 ------------------DFELSYDYAKDMKFDETEDFKKQLEATKKQLLIQIAVSNVLA 90 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + +K+ + + +K + E Sbjct: 91 RATVSEEESKKYYEENKEEFRTQELITARHI------LVDSEKEANNIYEEIKDGLDFSE 144 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKR 276 EK++ G + P+F+ + + + T TQ G I + + + Sbjct: 145 AAEKYSKCPSKAQGGSLGTFTRGQMVPEFEKAVLEAEVDKVTEAIKTQFGYHLIIVDNIK 204 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + +KA + + K + E+ + LR + Sbjct: 205 ESMIKPFDEVKAMIDNKLLQEKQNEQYNEFTQNLRDKYTVEI 246 >gi|228470588|ref|ZP_04055445.1| peptidyl-prolyl cis-trans isomerase family protein [Porphyromonas uenonis 60-3] gi|228307715|gb|EEK16691.1| peptidyl-prolyl cis-trans isomerase family protein [Porphyromonas uenonis 60-3] Length = 472 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 30/284 (10%), Positives = 89/284 (31%), Gaps = 17/284 (5%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--NGELEKIAVQELIVETLKKQEIE 91 ++ + T+ E I +I + ++ Q + G + ++L V+ L + + Sbjct: 38 SRGSIVDEVIWTVGDEPILKSEIENQKLYMRSQGMHLEGNPDCYLTEQLAVQMLFLNQAK 97 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV---V 148 I+ D+ V+ F + + + ++ ++ ++ + Sbjct: 98 IDSISVDNTKVDRFVDNFMESLVQQVGSRERLEEYFNRPYSSIREQQRTMAVNNEIVRQM 157 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + EI + ++ ++ + + + K + Sbjct: 158 QQKIIQGVTVTPSEIRSYYAQIPQDSLPYIPDAVEVQVLRITPEIELAAIDKIKEQLRGY 217 Query: 209 RLRLPKDCNKLEKFASKIHDVS-----IGKAQYLLESDLHPQFQNLLKKSQN--NTTNPY 261 + A S G+ ++ S L P+F ++ + + Sbjct: 218 SEDIRAGQRDFSTIARLYSQDSRTSVRGGEYGFVARSSLEPEFAQVVFALSDTKQVSPII 277 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAE 303 T G + + +KRD ++ + P K+++ ++ Sbjct: 278 RTATGYHIVQLIEKRD---NTINFRHILLKPSIAPDKLQQAVSK 318 >gi|304440474|ref|ZP_07400362.1| peptidyl-prolyl cis-trans isomerase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371040|gb|EFM24658.1| peptidyl-prolyl cis-trans isomerase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 370 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/290 (12%), Positives = 82/290 (28%), Gaps = 12/290 (4%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94 + + T+NG I ++ A + + E ++L E + + + Sbjct: 22 ACGNKPGVAATVNGVDIPVETFNEEYAAQRNSIVLTSGEDYLKEKLGKEDMTIDQGIREF 81 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 + + + + E I + K+ Q + + F Sbjct: 82 VLNNLVQMELVRQDAEKKDIKVDEKKVDEQINAIIEQSGSKEKFEEQLKEQGITEKFFRD 141 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG-----FVQKRIKDAEESR 209 E+ + + + E + + D + K ++ Sbjct: 142 YLAKQELVKEYQDHLKEELKISEEDAKAIYEKDKDKYFVADADHILVETEDEAKSIKKEI 201 Query: 210 LRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGV 267 ++ + + GK + +F++ + K + ++P TQ G Sbjct: 202 EEGKDFNELAKEKSKDPTAKDNGGKLGEFSTGQMVKEFEDAVVKMKEGEISDPVKTQFGY 261 Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 I + R + Q T + EY+ KL +A + Y Sbjct: 262 HLIKLNSLRHKE-----FDEVKDQIIETGTSEKLTEYLNKLEKDAKVKKY 306 >gi|207723563|ref|YP_002253962.1| isomerase rotamase protein [Ralstonia solanacearum MolK2] gi|207743079|ref|YP_002259471.1| isomerase rotamase protein [Ralstonia solanacearum IPO1609] gi|206588764|emb|CAQ35727.1| isomerase rotamase protein [Ralstonia solanacearum MolK2] gi|206594476|emb|CAQ61403.1| isomerase rotamase protein [Ralstonia solanacearum IPO1609] Length = 243 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 65/280 (23%), Gaps = 48/280 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +NG I + I Q + EL A L+ L +Q+ K G Sbjct: 5 AAVVNGHAIPSAKVDALIKK-SGQPDSPELRNRARDMLVDRELIEQDAAKRG-------- 55 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + Q Q+ +V +F N Sbjct: 56 --------------------------LLGRDDVQEQLAQARLNVLVAAEFEDYVKNSPTT 89 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++ + I + + + + Sbjct: 90 EDELHKQYEKIKAQFGNGKEYHAHHILVDKEADAKA------IIAKLKAGGNFEEIAKAQ 143 Query: 223 ASK-IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDL- 278 + + G + P+F L + T P TQ G I + D RD Sbjct: 144 SKDKGSGANGGDLDWANPGTYVPEFSAALTGLKKGEITLTPVKTQFGWHVIRLDDTRDAK 203 Query: 279 -GGEIALKAYLSAQNTPTK--IEKHEAEYVKKLRSNAIIH 315 +K L + +K LR A I Sbjct: 204 IPAFEDVKPQLLEMMMGDQNWQRAKFQAMLKDLREKATIK 243 >gi|169343240|ref|ZP_02864251.1| putative foldase protein PrsA [Clostridium perfringens C str. JGS1495] gi|169298538|gb|EDS80619.1| putative foldase protein PrsA [Clostridium perfringens C str. JGS1495] Length = 326 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 85/314 (27%), Gaps = 20/314 (6%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING------------ 70 +V A+ T+NGE IT G++ + + Q + Sbjct: 2 FSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFAQMKSQYGDKYMDDPQVA 61 Query: 71 ----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 + + VQ L+ + + E +K GI + + N D + Sbjct: 62 QQILQQRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQFENIKKGMGDNFDKALE 121 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + + + V++ + + + + K V + Sbjct: 122 AEGYTEDTFKDVIKNQVINQAVQDYIIKDVKVTDEDAQKYYDENKQQFVAKDSGVLTKHL 181 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + +N+ + Q + K N + K ++G + Sbjct: 182 LFENEEEAQKAYDEIQSGKTTFNDLFTKYENNKSEN-KKPIAENLGVVPAENSGLVQEFV 240 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAI---CDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 L + + TQ G I +K +K+ + K + Sbjct: 241 DGLKPLKEGEISKLIKTQFGYHIIQAGATYEKGAQLPFDEVKSQIIQILKQQKDSEKFKA 300 Query: 304 YVKKLRSNAIIHYY 317 + + + + + Y Sbjct: 301 DMDQWKKDLNVKVY 314 >gi|226944452|ref|YP_002799525.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Azotobacter vinelandii DJ] gi|226719379|gb|ACO78550.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Azotobacter vinelandii DJ] Length = 624 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 22/194 (11%), Positives = 66/194 (34%), Gaps = 6/194 (3%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + + + + ++ ++ F + + ++ A Q+ + + Sbjct: 211 QAYYEEHASSYMTSEQLVVEYIELKRDAFFDQVEIRDEDLQALYQREIANLAEQRQAAHI 270 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 L N ++ + ++++ + + ++F+ G Y Sbjct: 271 LL--EVNDKLSEEQAKAKLEELKARIDKGEDFAALAKEFSQDPGSADKGGDLGYAGPDVY 328 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 P F+ +L + ++P ++ G I + D + ++ LK L + ++E+ Sbjct: 329 DPAFEKVLYSLKEGEVSSPVRSEFGWHLIKLLDVQAPEIPSFDTLKEKLVHELKAEQVEQ 388 Query: 300 HEAEYVKKLRSNAI 313 E + L + A Sbjct: 389 AFVEASRDLENAAF 402 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 26/247 (10%), Positives = 73/247 (29%), Gaps = 26/247 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I + ++++ + + + +S+ +NG I ++++ + Sbjct: 1 MLQNIRDNSQGWIAKIIIGVIIVLLALTGFDAILTSTSNSQNAAEVNGAKIGLAELNREV 60 Query: 61 ALLK-------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + Q G L A+ LI L Q E + F N ++ Sbjct: 61 ETQRRQLLQQLGKDFDASQLNEGLLRNAALSGLIERKLLLQGAEAADFAFSQNALDQLIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV----------KNDFML 154 + + A F + + G F+Q L + + + + Sbjct: 121 QTPEFQVDGRFDANRFDQVIAQMGYSRPQFRQMLEQEMLIGQLRAGLAGSGFATDREIGD 180 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + + + V+ + + + ++ + + E + Sbjct: 181 FVRLERQTRDFYTLTLSADPAQVTVGDEVVQAYYEEHASSYMTSEQLVVEYIELKRDAFF 240 Query: 215 DCNKLEK 221 D ++ Sbjct: 241 DQVEIRD 247 >gi|189461628|ref|ZP_03010413.1| hypothetical protein BACCOP_02287 [Bacteroides coprocola DSM 17136] gi|189431658|gb|EDV00643.1| hypothetical protein BACCOP_02287 [Bacteroides coprocola DSM 17136] Length = 457 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 92/312 (29%), Gaps = 19/312 (6%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 ++ F ++ ++ + + Y + + + E I D+ + + Sbjct: 1 MNKF--KFIKFYACMLLLLAGVSVYAQNNVIDEVVWVVGDEAILKSDVENERLNAQYENR 58 Query: 69 --NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 +G+ + +EL ++ L + E + V Q + Sbjct: 59 HFDGDPYCVIPEELAIQKLYLHQAEIDSVMVSDQEVIQEVEQRIAWLADQIGSKEKMEEY 118 Query: 127 QGIGDNHFKQYLAIQSIWPDV---VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 ++ L ++ + E+ K+ ++ + Sbjct: 119 YNKSYTQIREMLRENVKSQKTVVQMQQKIVGDIKLTPAEVRNYFSKLPQDSIPFIPTQVE 178 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI-----GKAQYLL 238 + I ++ +++ E R+ K A + G+ + Sbjct: 179 VQIITQEPKISEEEIERVKSQLREYADRVNKGETSFSTLARFYSEDPGTARRGGEGGFTG 238 Query: 239 ESDLHPQFQNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 +L P+F N++ + + + T+ G + +KR G+ ++ P Sbjct: 239 RGELVPEFANVVFNLTDTKKVSKVFETEFGYHIAQLIEKR---GDRVNYRHIL--LRPKV 293 Query: 297 IEKHEAEYVKKL 308 +K + +L Sbjct: 294 DQKDIDAALARL 305 >gi|220916557|ref|YP_002491861.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-1] gi|219954411|gb|ACL64795.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-1] Length = 523 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 42/385 (10%), Positives = 90/385 (23%), Gaps = 73/385 (18%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKS-----WAMSSRIRTTINGEVITDGD 55 M V + L ++++F I S + +NG+ I+ D Sbjct: 1 MLDIVRANKKGIFSWLIVLGIVVVFAINFGPGSLSKGGAGCGGAPAYAARVNGKSISAAD 60 Query: 56 ISKRIALLKLQKINGE-------------LEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++ L L + A+ L L QE + G+ V Sbjct: 61 FERQYENLLRFYQQQAGEGFTRELAAQLGLGRQALGVLEDRELALQEARRRGVVVTDREV 120 Query: 103 NYFFVQH---ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV----------- 148 + Q N E + + +F+ + ++ ++ Sbjct: 121 SEAVHQMPAFQENGQFRYETYLEAVRANYGSPGNFEAAVRDDLLYQKILGALVETVKVPA 180 Query: 149 -----------------------------------KNDFMLKYGNLEMEIPANKQKMKNI 173 + +E + + Sbjct: 181 TEVRAQWAASADRASLQFVRFPVAAAQAEVKVPDAEAKAFADKEGARVEAFYKENADRYD 240 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQ-KRIKDAEESRLRLPKDCNKLEKFASKIH-DVSI 231 + +R VL + ++ K+I +A + + + Sbjct: 241 QRAKAHVRHVLARVAPGASADEEAAARKKIDEAAARVKKGEDFAKVAAALSDDPNTKDRG 300 Query: 232 GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK---RDLGGEIALKAY 287 G ++ E F + + P T G I + R + E A Sbjct: 301 GDLGFVSEGLADAAFAKAALALKAGEVSEPVRTPAGWHLIRADEVVPARKVTLEAARLDI 360 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNA 312 + + E + A Sbjct: 361 ARELLARDRAQALAREKAQAALDAA 385 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 3/76 (3%) Query: 243 HPQFQNLLKKSQNNT-TNPYVTQKG--VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 Q L + T G + + + + D A +A + A+ K E+ Sbjct: 432 PELAQAALSAKAGEVLPKVFDTPSGPVIAVVKLRESPDPARFEAERAGIEARLQGMKAEQ 491 Query: 300 HEAEYVKKLRSNAIIH 315 ++++LR A I Sbjct: 492 VRRAWLEELRGKAKIE 507 >gi|262276274|ref|ZP_06054083.1| peptidyl-prolyl cis-trans isomerase PpiD [Grimontia hollisae CIP 101886] gi|262220082|gb|EEY71398.1| peptidyl-prolyl cis-trans isomerase PpiD [Grimontia hollisae CIP 101886] Length = 630 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 23/253 (9%), Positives = 61/253 (24%), Gaps = 11/253 (4%) Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTV--NYFFVQHARNTGLSAEDFSSFLD 125 + + V LI + ++ + T + A + Sbjct: 158 RQDLVREQLVNALISSEFALKGELEALHKLEGQTRTVRTLTLPLADFAEKADITAEQKTA 217 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 F + + + ++ G E E A + K + Sbjct: 218 YYEQNPAEFVRPEQFKIAYVELSGEGIADVAGVTEDEAKAYYEANKASYGTAEQRKVSHI 277 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHP 244 I + + + + + + + G+ + + + P Sbjct: 278 MIQGDDNAAKEKAEAVLSELNA----GADFAELAKTRSDDTFSAEQGGQLDWFDKGVMDP 333 Query: 245 QFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKH 300 F+ ++ + T + G I + D + ++ + AQ + Sbjct: 334 AFEEAAFALNNKGDITGVVQSDFGFHIIKLDDVKPSDAKPFAQVRDDIMAQLKQQHAVEK 393 Query: 301 EAEYVKKLRSNAI 313 +L A Sbjct: 394 FYALSNELAEKAF 406 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 19/238 (7%), Positives = 68/238 (28%), Gaps = 18/238 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + ++ F + Y + T+ E I+ + Sbjct: 1 MMERLREGVNSIAVKIILGLIIFSFVFAGVGGYLASGSVQP-AATVGNEEISRNQFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + ++ ++ ++L QE + G+ + + Sbjct: 60 QNERALMQAQAGDFFSQLLSDPNYLAQFRFNVLERMVNQSLLDQEAQNLGLRVSDDQIKQ 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + G + + + A + D+V+ + + E + Sbjct: 120 TIREMPAFRGATGLFDNDLYLASLRRNGLTPDQFA-DYVRQDLVREQLVNALISSEFALK 178 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + + +RT+ + D + +++ E++ + + Sbjct: 179 GELEALHKLEGQTRTVRTLTLPLADFAEKADITAEQKTAYYEQNPAEFVRPEQFKIAY 236 >gi|148378054|ref|YP_001252595.1| peptidil-prolyl isomerase family protein [Clostridium botulinum A str. ATCC 3502] gi|153931321|ref|YP_001382453.1| peptidil-prolyl isomerase family protein [Clostridium botulinum A str. ATCC 19397] gi|153936847|ref|YP_001386006.1| peptidil-prolyl isomerase family protein [Clostridium botulinum A str. Hall] gi|153940453|ref|YP_001389411.1| peptidil-prolyl isomerase family protein [Clostridium botulinum F str. Langeland] gi|168181156|ref|ZP_02615820.1| peptidil-prolyl isomerase family protein [Clostridium botulinum NCTC 2916] gi|170757604|ref|YP_001779674.1| peptidil-prolyl isomerase family protein [Clostridium botulinum B1 str. Okra] gi|226947272|ref|YP_002802363.1| peptidil-prolyl isomerase family protein [Clostridium botulinum A2 str. Kyoto] gi|148287538|emb|CAL81602.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum A str. ATCC 3502] gi|152927365|gb|ABS32865.1| peptidil-prolyl isomerase family protein [Clostridium botulinum A str. ATCC 19397] gi|152932761|gb|ABS38260.1| peptidil-prolyl isomerase family protein [Clostridium botulinum A str. Hall] gi|152936349|gb|ABS41847.1| peptidil-prolyl isomerase family protein [Clostridium botulinum F str. Langeland] gi|169122816|gb|ACA46652.1| peptidil-prolyl isomerase family protein [Clostridium botulinum B1 str. Okra] gi|182668005|gb|EDT79984.1| peptidil-prolyl isomerase family protein [Clostridium botulinum NCTC 2916] gi|226843846|gb|ACO86512.1| peptidil-prolyl isomerase family protein [Clostridium botulinum A2 str. Kyoto] gi|295317521|gb|ADF97898.1| peptidil-prolyl isomerase family protein [Clostridium botulinum F str. 230613] Length = 247 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/282 (12%), Positives = 75/282 (26%), Gaps = 39/282 (13%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 M + I +NG+ ITD D+ I ++ + +ELI + + + Sbjct: 1 MENNIVAIVNGQEITDRDVDNTILSFPKERQTYLNTEKGREELIKQMIDFELSYNYAKDM 60 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + + I V Sbjct: 61 KFDETED-------------------------FKKQLEATKKQLLIQVAVSNALARATVS 95 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E + + K + T R +L + ++ Sbjct: 96 EEESKKYYEENKEEFRTQELITARHILVDSEEEANNIYEEIK-----------NGLDFSE 144 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKR 276 EK++ G + P+F+ + + + T TQ G I + + + Sbjct: 145 AAEKYSKCPSKAQGGSLGTFTRGQMVPEFEKAVLEAEVDKVTQAIKTQFGYHLIIVDNIK 204 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + +KA + + K + E+ + LR + Sbjct: 205 ESMIKPFDEVKAMIDNKLLQEKQNQQYNEFTQNLRDKYTVEI 246 >gi|197121763|ref|YP_002133714.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. K] gi|196171612|gb|ACG72585.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. K] Length = 524 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 42/385 (10%), Positives = 89/385 (23%), Gaps = 73/385 (18%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKS-----WAMSSRIRTTINGEVITDGD 55 M V + L ++++F I S + +NG+ I+ D Sbjct: 1 MLDIVRANKKGIFSWLIVLGIVVVFAINFGPGSLSKGGAGCGGAPAYAARVNGKSISAAD 60 Query: 56 ISKRIALLKLQKINGE-------------LEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++ L L + A+ L L QE + G+ V Sbjct: 61 FERQYENLLRFYQQQAGEGFTRELAAQLGLGRQALGVLEDRELALQEARRRGVVVTDREV 120 Query: 103 NYFFVQH---ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV----------- 148 + Q N E + + +F+ + ++ ++ Sbjct: 121 SEAVHQMPAFQENGQFRYETYLEAVRANYGSPGNFEAAVRDDLLYQKILGALVETVKVPA 180 Query: 149 -----------------------------------KNDFMLKYGNLEMEIPANKQKMKNI 173 +E + + Sbjct: 181 TEVRAQWAASADRASLQFVRFPVAAAQAEVKVPDADAKAFADKEGARVEAFYKENADRYD 240 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQ-KRIKDAEESRLRLPKDCNKLEKFASKIH-DVSI 231 + +R VL + ++ K+I +A + + + Sbjct: 241 PKAKVHVRHVLARLAPGASADEEAAARKKIDEAAARVKKGEDFAKVAAALSDDPNTKDRG 300 Query: 232 GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK---RDLGGEIALKAY 287 G ++ E F + + P T G I + R + E A Sbjct: 301 GDLGFVSEGLADAAFAKAALALKAGEVSEPVRTPAGWHLIRADEVVPARKVTLEAARLDI 360 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNA 312 + + E + A Sbjct: 361 ARELLARDRAQALAREKAQAALDAA 385 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 3/76 (3%) Query: 243 HPQFQNLLKKSQNNT-TNPYVTQKG--VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 Q L + T G + + + + D A +A + A+ K E+ Sbjct: 433 PELAQAALSAKAGEVLPKVFDTPSGPVIAVVKLRESPDPARFEAERAGIEARLQGMKAEQ 492 Query: 300 HEAEYVKKLRSNAIIH 315 ++++LR A I Sbjct: 493 VRRAWLEELRGKAKIE 508 >gi|332300230|ref|YP_004442151.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Porphyromonas asaccharolytica DSM 20707] gi|332177293|gb|AEE12983.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Porphyromonas asaccharolytica DSM 20707] Length = 472 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 30/284 (10%), Positives = 91/284 (32%), Gaps = 17/284 (5%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIE 91 + ++ + T+ E I +I + ++ Q + G + ++L V+ L + + Sbjct: 38 SAGSVVDEVIWTVGDEPILKSEIENQKLYMRSQGMPLEGNPDCYLTEQLAVQMLFLNQAK 97 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV---V 148 I+ D+ V+ F + + + ++ I ++ ++ + Sbjct: 98 IDSISVDNTKVDRFVDNFMESLVQQIGSRERLEEYFNRPYSSIREQQRIMAVNNEIVRQM 157 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + EI + ++ ++ + ++ + + + Sbjct: 158 QQKIIQGVAVTPTEIRSYYAQIPQDSLPYIPDVVEVQALRITPDIELAAIDQIKEQLRSY 217 Query: 209 RLRLPKDCNKLEKFASKIHDVS-----IGKAQYLLESDLHPQFQNLLKKSQN--NTTNPY 261 + A S G+ ++ S L P+F ++ + + Sbjct: 218 SDDIVAGRRDFSTIARLYSQDSRTSLRGGEYGFVARSSLEPEFAQVVFALSDTKQVSPII 277 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAE 303 T G + + +KRD ++ + P K+++ + Sbjct: 278 RTATGYHIVQLIEKRD---NTINFRHILLKPSVAPDKLQQAVNK 318 >gi|217958742|ref|YP_002337290.1| peptidylprolyl isomerase [Bacillus cereus AH187] gi|229137952|ref|ZP_04266551.1| Foldase protein prsA 2 [Bacillus cereus BDRD-ST26] gi|217064761|gb|ACJ79011.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus AH187] gi|228645609|gb|EEL01842.1| Foldase protein prsA 2 [Bacillus cereus BDRD-ST26] Length = 285 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 30/304 (9%), Positives = 75/304 (24%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT D K++ K Sbjct: 4 KHIFIITALLSILMLSACGQKNDSDTVATATDSTITKSDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + S D + + + Sbjct: 56 LYEMMAQDVITKKYKVSDDDVDKELQKAKNQYGDQFKNVLKNNGLKDEADF--------- 106 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 107 --KNQIKFKLAMNEAIKKSITEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLKV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+ L +K + +I + ++ A Sbjct: 205 GQISNPVASPNGYHIIKLTDKKALKPYDEVKDSIRKNLEEERISDPIFGKKLLQNELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|325300050|ref|YP_004259967.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacteroides salanitronis DSM 18170] gi|324319603|gb|ADY37494.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacteroides salanitronis DSM 18170] Length = 457 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/322 (10%), Positives = 94/322 (29%), Gaps = 18/322 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 +S F L +V ++ + + + + + + E I D+ + + Sbjct: 1 MSKF--RLMKCYVCLLLSLAGVSVFAQDNVIDEVVWVVGDEAILKSDVENERLNAQYENR 58 Query: 69 --NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 +G+ + +EL V+ L + E I V Q + Sbjct: 59 HFDGDPYCVIPEELAVQKLFLHQAELDSIIVSDQEVIQQVEQRISWLTEQIGSREKMEEY 118 Query: 127 QGIGDNHFKQYLAIQS---IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 ++ L + ++ + + E+ K+ ++ + Sbjct: 119 YNKTYTQIREMLRENIRDGLTVQQMQQEIVGDIKLTPAEVRNYFNKLPQDSIPFVPTQVE 178 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI-----GKAQYLL 238 + I + +++ E R+ K A + G+ + Sbjct: 179 VQIITQEPKIPETEIERVKAQLREYADRVNKGETSFSTLARFYSEDPGTARRGGEGGFTG 238 Query: 239 ESDLHPQFQNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT-PT 295 +L P+F N++ + + + T+ G + +KR G+ ++ + Sbjct: 239 RGELVPEFANVVFNLTDTKKVSKVFETEFGFHIAQLIEKR---GDRVNYRHILLRPKVDQ 295 Query: 296 KIEKHEAEYVKKLRSNAIIHYY 317 K + + + + Sbjct: 296 KAIDASLARLDSIADDIRKEKF 317 >gi|225552054|ref|ZP_03772994.1| basic membrane protein [Borrelia sp. SV1] gi|225371052|gb|EEH00482.1| basic membrane protein [Borrelia sp. SV1] Length = 336 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 102/334 (30%), Gaps = 37/334 (11%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKLQKI---N 69 + ++ +I V I S+ + IN E+IT ++ + K + Sbjct: 1 MKSFLFWVILGTVGISSFAQ----NTPVAIINLYKNEIITKTGFDSKVDIFKKTQGRDLT 56 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 +K +Q LI + L QE K GI + V + E ++KQG Sbjct: 57 DAEKKQVLQVLIADVLFSQEASKQGIKISDDEVMQTIRTQFGLVNFTDEQIKQMIEKQGT 116 Query: 130 GDNHFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + +V + F E EI + K V + R Sbjct: 117 NWGELLSSMKRSLSSQKLVLKQAQPKFSEIKTPSEKEIIEYYEANKTKFVNPDISRVSHI 176 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLH- 243 + + + + R + + K+++ G +L D + Sbjct: 177 FFSTKDKKRSDVLDQAKNILSQIRSKKITFEEAVRKYSNDESSKAKNGDLGFLSRGDQNA 236 Query: 244 ------PQFQNLLKKSQNNTTNPYVTQKGVEYIAI-----------CDKRDLGGEIALKA 286 + + ++ + ++P +++G + + DK ++ +K Sbjct: 237 QNLLGADFVKEVFNFNKGDISSPIASKEGFHIVKVTEKYAQRFLGLNDKVSPTADLIVKD 296 Query: 287 YLSAQNTP----TKIEKHEAEYVKKLRSNAIIHY 316 + + + + + KL +A I Sbjct: 297 AIRNNMINVQQQQIVVQVQQDMYGKLNKSANIQI 330 >gi|319899225|ref|YP_004159318.1| peptidyl-prolyl cis-trans isomerase [Bartonella clarridgeiae 73] gi|319403189|emb|CBI76748.1| peptidyl-prolyl cis-trans isomerase [Bartonella clarridgeiae 73] Length = 317 Score = 84.0 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 31/282 (10%), Positives = 71/282 (25%), Gaps = 48/282 (17%) Query: 40 SRIRTTINGEVITDGDISK---RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 S + I+G+ IT G + + I ++ + + ++ + + K G+ Sbjct: 49 SHVMAVIDGKNITAGQLDELALEINPNLVRIPDEQRRVTVLKAYLNMQALAKAALKKGMD 108 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 + + K + K Sbjct: 109 KTEAYDKR------------------------------MAVMRDNILQQLYFKEMIVDKI 138 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + +++ +K+ E R +L + + + Sbjct: 139 ADADVKALYDKEIAALPKEDEIKARHILVKTKEEAEA-----------VIKRLNKGENFE 187 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICD 274 +K ++ G Y + F+ N T P + G I + D Sbjct: 188 EVAKKDSTDGSSAVGGDLGYFSRGQMVKPFEEAAFNLKVNEYTKKPVESPFGWHVIKVED 247 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +R + + I + + LRS + Y Sbjct: 248 RRLKQP--PVFDDVKDVLRTQLIRERYQTLIPDLRSEVNVQY 287 >gi|291614457|ref|YP_003524614.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sideroxydans lithotrophicus ES-1] gi|291584569|gb|ADE12227.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sideroxydans lithotrophicus ES-1] Length = 261 Score = 84.0 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 35/275 (12%), Positives = 79/275 (28%), Gaps = 47/275 (17%) Query: 45 TINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +NG I + RI + Q E K+ +LI + Q K+G+ + Sbjct: 30 IVNGVSIPQARVDIRIKVAAQQGQPDSPEFRKVIRDDLINLEVISQAAVKNGLDKQPDVA 89 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + + V++ ++ Sbjct: 90 QQL------------------------------ELARQSVLAGAFVQDYAKSHPIGDDVL 119 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + +EY + +L D + G ++K K + Sbjct: 120 QKEYEALKARVGNKEYKLSHILVGTEDEAKKIAGQLKK-----------GAKFAKIAKAQ 168 Query: 223 ASKI-HDVSIGKAQY-LLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + + G + + + + P + + K + + P TQ G I + D R+L Sbjct: 169 SKDPGSKNNGGDLGWAVPSNFVQPFAEAVAKLKKGEVSAPVQTQYGWHIIKLEDTRELKV 228 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + ++ + ++ +RS A + Sbjct: 229 --PTFEEMKPNLEKRLQQQAIQKEIEDMRSKAKVE 261 >gi|258510728|ref|YP_003184162.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477454|gb|ACV57773.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 314 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 28/314 (8%), Positives = 82/314 (26%), Gaps = 30/314 (9%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70 +I + + + + IT +++++ Sbjct: 5 RWISGFVGAAAGALVVGGVWFGTYAAHGGGSVVAMVGKTPITRQELAQQSEAYAGS---- 60 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFLDKQGI 129 ++ELI L +Q K +T + +N G++++ +S L + + Sbjct: 61 ----AMLEELIANALIEQAAAKQHVTATNAEINQQLTAIEMQNGITSDAQLNSLLAQNHM 116 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 F + + + + + +I + ++ ++ + + ++ Sbjct: 117 TKAQFLNQIRDNILASKLAEAQVH----VTDKQIASYYKQNASMFTVPETRKIAIIAVKT 172 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDL----HP 244 + + + + + G +L Sbjct: 173 KADAEKALTE---------IQSGTPFASVAKSVSIDAATRSKGGLLGTFSLDELKAGDPA 223 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEA 302 ++P Q G + + E A+++ + E Sbjct: 224 IASTAFALKAGAVSDPVKVQGGYDIVQCQAITPQHVEPLSAVRSQIIQAIKQQNAESETK 283 Query: 303 EYVKKLRSNAIIHY 316 V +L +A I Sbjct: 284 -LVAQLAKSADIRI 296 >gi|78485440|ref|YP_391365.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomicrospira crunogena XCL-2] gi|78363726|gb|ABB41691.1| peptidyl-prolyl cis-trans isomerase D [Thiomicrospira crunogena XCL-2] Length = 638 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 41/400 (10%), Positives = 103/400 (25%), Gaps = 93/400 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + +I + +++ F + I Y + +NGE +T + Sbjct: 1 MLQSIRNHAQGWIAWVIVGLIILTFALFGIDQYAKGDKII-VVAEVNGEDVTANEFLTLY 59 Query: 61 ALLKLQKIN------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + + + N +L + LI + +Q + + + ++ Sbjct: 60 SRQQARLKNQFGEMYDQVVKDQQLRDEVMDALIESEVVRQWADSHNMMISNQQLSATIES 119 Query: 109 ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD------------------- 146 ++ + + L + G+ F+ I Sbjct: 120 AEVFQKDGQFDQQLYQDILLQNGLNVARFEYEQRQFLIENQNRQLTMASAITNDTQLAQL 179 Query: 147 --------------VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT---------- 182 V + FM + + EI K K + + Sbjct: 180 AALQFQQRKVNYLRVDQRPFMQEAQITDDEIQTYYNKHKEDFITPEQVVLSYVLLSKKDL 239 Query: 183 ---------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK------------ 221 +L + +KR ++ + +K Sbjct: 240 ADKVSVDDAILKRFYQDNKDQFTQPEKRQASHILVKVDAESQDAEAQKTIKEIQAKLADG 299 Query: 222 ---------FASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYI 270 ++ G + + P F + + N ++P T+ G I Sbjct: 300 EDFAALAKTYSDDPGSANMGGDLGLFQQGMMVPAFDKAVFSMKLNEISDPVKTEFGYHLI 359 Query: 271 AICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + + +KA + + +K + +++L Sbjct: 360 KLTKIQPKKMQAFNEVKAEVETLYRRQQADKQYFDELEQL 399 >gi|134297991|ref|YP_001111487.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfotomaculum reducens MI-1] gi|134050691|gb|ABO48662.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfotomaculum reducens MI-1] Length = 344 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 41/331 (12%), Positives = 99/331 (29%), Gaps = 30/331 (9%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 +K + IF + ++ + + T+NG+ IT + K+ + + Sbjct: 1 MKNKFLQGCIPIFLSLLLLLTGCANNKANVVATVNGKDITRQQLDKQTNQMVERYKQQGF 60 Query: 71 ------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 +LE+ + ++I + L QE EK + ++ + + E Sbjct: 61 DLTTKENKAMKEQLEQSILDDMITKELLLQEAEKQKLIPAKEAIDKNM-AEIKKGFPNEE 119 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 ++ L++ + + ++ L + + + + EI + K Sbjct: 120 EYKKALEESKVTEAELREQLILDESSRKLYEKVTADVKKPTDEEITKFYNENKGREPIGT 179 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESR---------LRLPKDCNKLEKFASKIHDV 229 R + + +Q V KR + + + + + Sbjct: 180 PERLEVKHMLFAINSDQPGVPKRGEKEALEAAKLALAEVTQKGRDFGVVAREKSDDLGTR 239 Query: 230 SIGKAQYLLES---DLHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGE--IA 283 G + + + T P + G I + + Sbjct: 240 ENGGSYTIDRGANTTDPAFEKAAENLKPGEITKEPVKSAYGFHIIKLEKVTPASTKALTE 299 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +K ++AQ + +++ LR NA I Sbjct: 300 VKDSIAAQLEGEAKQAKFTQFIDNLRKNAKI 330 >gi|187478461|ref|YP_786485.1| peptidyl-prolyl cis-trans isomerase [Bordetella avium 197N] gi|115423047|emb|CAJ49578.1| peptidyl-prolyl cis-trans isomerase [Bordetella avium 197N] Length = 648 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 26/230 (11%), Positives = 63/230 (27%), Gaps = 14/230 (6%) Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 ++ + + A D+ S ++ + P+ V+ + Sbjct: 173 PQEVVNNVEQALTQKRTIQLRSFLAADYRSKVNVSPQDIQAWYDANKESLRIPEQVQAQY 232 Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIR--TVLFSIPDNKLQNQGFVQKRI 202 + +I + ++ KN R +L P + K Sbjct: 233 LVLDEAAATQGVQVKDEDIASYYEQNKNRFGTPEQRRASHILIEAPASGEARDKARAKAE 292 Query: 203 KDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260 A E+ +K + G ++ + + P Q + ++ + Sbjct: 293 AIAREAAANPASFAELAKKDSQDAGSAARGGDLGWIAANSVPPSVQQAIDGLPKDGVSGV 352 Query: 261 YVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKL 308 + G I + D + + +K ++ + AE KL Sbjct: 353 VESPFGFHIIKVTDIKPAQIKPLAEVKEQITNEIRKQLASARFAEMATKL 402 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 69/241 (28%), Gaps = 22/241 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T +++ + V+ F IV + Y S+ + I G+ IT Sbjct: 1 MFEFIRTH-RRWMQFILLVLVVPSFAIVGVQGYSSFVNTEVELANIGGQGITQPQFDAAH 59 Query: 61 ALLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSN---TVNY 104 Q L + + +LI + L + + Sbjct: 60 RNQLEQFRQRMGSQFDPAVIDTPALREQLLNQLIDQRLLLMVAADNRFSVSDETLRNTIA 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-----NDFMLKYGNL 159 Q + S E + L QG+ F+ L V++ + N Sbjct: 120 AIPQVQDDGRFSPERYRQVLAAQGLSPTSFENGLRRDLAVARVLEPIGLSARVPQEVVNN 179 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + K+ ++ + R+ + P + ++ ++ E+ + + Sbjct: 180 VEQALTQKRTIQLRSFLAADYRSKVNVSPQDIQAWYDANKESLRIPEQVQAQYLVLDEAA 239 Query: 220 E 220 Sbjct: 240 A 240 >gi|222839633|gb|EEE77956.1| predicted protein [Populus trichocarpa] Length = 390 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 19/163 (11%), Positives = 44/163 (26%), Gaps = 8/163 (4%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 E ++ + + R I +K +K A+E Sbjct: 1 IEAGITLSEDDVRSYYNQNAERLAGPEERRASHILINASKDAPAAEQEKAKAKADELLAE 60 Query: 212 LPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQK 265 L KD + + A S G Y + F++ + ++ + Sbjct: 61 LRKDPKRFAELAKANSQDGGSAASGGDLGYFGRGAMVKPFEDAAFGMKVGDISDVVHSDF 120 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 G I++ D + + + + ++ +L Sbjct: 121 GYHIISLEDIK--KPKAPSFEQMRPKLEAELKQQQAQRKFAEL 161 >gi|110833403|ref|YP_692262.1| peptidyl-prolyl isomerase [Alcanivorax borkumensis SK2] gi|110646514|emb|CAL15990.1| peptidylprolyl isomerase [Alcanivorax borkumensis SK2] Length = 269 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 29/279 (10%), Positives = 82/279 (29%), Gaps = 42/279 (15%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 T+ + IT +I++ + +N A + L+V L Q+ + G+ D Sbjct: 17 LITVGDQTITQDEIAQEMQYHPATDLNQAQHNAA-RALVVRQLLLQQAQTMGLAIDCEGD 75 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + + + K + + Sbjct: 76 EAVISAL-------------------------------------LERELTVPKPQDEDCR 98 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEK 221 + + + L R +L + + +++ + + + P+ ++ Sbjct: 99 RFHKVEIDRFSEPCQVLTRHILLAAGPDDARSRDSQYHQGQKLIQQLRDAPQRFPELAQR 158 Query: 222 FASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG- 279 F+ G+ +L + + L + + P T+ G + I ++R+ Sbjct: 159 FSQCPSKDQGGELGWLQLGQTIPELDKVLQRLPEGLHARPLPTRYGWHVVHIIERRESRP 218 Query: 280 -GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 ++ + T + Y+ L ++ + + Sbjct: 219 LPYEQVEERVRHTLTEQATRRALRHYLLALEADIGVKGF 257 >gi|325288391|ref|YP_004264572.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophobotulus glycolicus DSM 8271] gi|324963792|gb|ADY54571.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophobotulus glycolicus DSM 8271] Length = 311 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 27/281 (9%), Positives = 67/281 (23%), Gaps = 15/281 (5%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELE---KIAVQELIVETLKKQEIEKSGITFDS 99 +N E+I D ++ +K + ++ + L + + Sbjct: 30 VAKVNDELIAKKDFDNKLNDIKTYVQSQGVDFTTEEGKAYLQNIQGQLLSMSIQDAIIRQ 89 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + + S + Sbjct: 90 EVKKNNWDTNIPQITEKVNQISQKNGGDLATYLKQQGLTEEDLKNTFAFAYYTGKDATVS 149 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 E E + + + + + + + +++ Sbjct: 150 EEETRQYFEDHFDQYGGQMEQVKARHILVGTEDEAKDIIRQI--------QAGADFAALA 201 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRD 277 ++ ++ + G+ Y + +F+ + TT P T+ G I + D + Sbjct: 202 KEKSTDGSKDNGGEIDYFTRGKMVEEFEKAAFDMKIGELTTTPVKTKYGYHVIQVLDHKQ 261 Query: 278 L--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +K + A + Y KL A I Y Sbjct: 262 TVKPDYEKVKEKVQADALENAQNQKAESYYMKLAQEAKIEY 302 >gi|145589158|ref|YP_001155755.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047564|gb|ABP34191.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 263 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 88/302 (29%), Gaps = 51/302 (16%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + I + Y + + +NG+ I + K + Q N ++ + L Sbjct: 6 IFTASLISSALLYTTAFAQN--AAIVNGKAIPKAQLDKLVQK-SGQPDNPQVRNQGREML 62 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + L QE +K G+ Q + Sbjct: 63 VTKELILQEADKRGV------------------------------IQKESVREQLDQARV 92 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + V ++ + A +EY + +L + V+ Sbjct: 93 GILVAAVFEDYVEKDGVSEADLQAAYDSVKNQYAGKEYHVEHILVEKEGDAKAIIVQVK- 151 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT 258 + + + + G ++ E L P+F +++++ T Sbjct: 152 ----------SGGNFEDIAKTKSKDPGSAANGGDLGWVTEKALVPEFSKSMVQLKNGQMT 201 Query: 259 -NPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTK--IEKHEAEYVKKLRSNAI 313 P +Q G I + + RD LK L + + +E ++KLR+ A Sbjct: 202 DKPVKSQFGWHVIKMVEVRDTKAPSYEELKPQLKQMIVSDQNWQKAKFSEMMQKLRAKAK 261 Query: 314 IH 315 I Sbjct: 262 IQ 263 >gi|83745917|ref|ZP_00942974.1| Peptidyl-prolyl cis-trans isomerase [Ralstonia solanacearum UW551] gi|207743054|ref|YP_002259446.1| peptidyl-prolyl cis-trans isomerase protein [Ralstonia solanacearum IPO1609] gi|83727607|gb|EAP74728.1| Peptidyl-prolyl cis-trans isomerase [Ralstonia solanacearum UW551] gi|206594451|emb|CAQ61378.1| peptidyl-prolyl cis-trans isomerase protein [Ralstonia solanacearum IPO1609] Length = 648 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 44/419 (10%), Positives = 101/419 (24%), Gaps = 107/419 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M V T + L+ V F + Y + S + VIT ++ R+ Sbjct: 1 MLDFVRTH-RRLMFLVLLILVFPSFVFFGVQGYSRFMDGSHDAAKVGDTVITTSELDARV 59 Query: 61 -------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 Q ++ + + +I + + E ++ ++ V Sbjct: 60 REQTERLRQMLGGQYDPRQFEGPQMRRDVLDGIIQQRMMVNEASRTNLSVADTKVRETIE 119 Query: 108 Q-------HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------- 149 Q + + + L QG+ F L + + + + Sbjct: 120 QIPAVAQLRKPDGKFDTDAYIKLLAAQGMTPEQFDARLRSELVLQQIPQSIVSSAFVPKS 179 Query: 150 ----------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 D+ K + I A + ++ Sbjct: 180 LVDRLIEARDQQREVQALLLKPADYASKVAVDDKAIQAYYDAHQQEFAVPEQVKAEYVVF 239 Query: 188 PDNKLQNQG----FVQKRIKDAEESRLRLPKDCNKL------------------------ 219 + Q K D +R + + Sbjct: 240 SGEDMMKQIPVTPEQLKEYYDQNAARFKTEEQRRAAHILIKLPDNAKPADKDAAKKRAEE 299 Query: 220 ------------EKFASKIHDV-----SIGKAQYLLESDLHPQFQNLLK--KSQNNTTNP 260 + A K + G+ +L + PQF++ L K + ++ Sbjct: 300 VLAEVRKTPGNFAELAKKYSEDPGSAAQGGELGFLAKGATVPQFESALFALKQPGDISDV 359 Query: 261 YVTQKGVEYIAICDKRD------LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + G I + + + + L+ + Q K + + + + Sbjct: 360 VQSDFGFHVIKLEEVKGGGVQSLEAVKPELEREVRTQLANKKYTELADAFSNGVEDQSD 418 >gi|74317550|ref|YP_315290.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiobacillus denitrificans ATCC 25259] gi|74057045|gb|AAZ97485.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiobacillus denitrificans ATCC 25259] Length = 274 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 42/318 (13%), Positives = 84/318 (26%), Gaps = 61/318 (19%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMS------------SRIRTTINGEVI--TDGDISKRI 60 + +I +++ S+ T+NG+ I G++ KR Sbjct: 1 MRIALLPTLILLAFSPLAHSQTPTPTMPPAAAPAADPSKPLATVNGKEIPALYGELVKR- 59 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + + Q + EL+ + LI L + G+ D Sbjct: 60 EMAQGQPDSPELDARVRESLINLELLSRAATDKGLDKDPRLAAAL--------------- 104 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + +++ A + EY Sbjct: 105 ---------------DIRRKDQLAKAYLEDYIKAHPVTDAEVQAAYDKAKAGPIEPEYRA 149 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 R +L + K + K +K + + G + Sbjct: 150 RHIL-----------VSTEAEAKKVIADLGKKAKFETLAKKMSKDPGSAKNGGALDWADR 198 Query: 240 SDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 P+F + L + TT P TQ G I + D R ++ + + Sbjct: 199 RAFVPEFSEALASLKKGETTQTPVKTQFGYHVIRLDDTRQ--PKLPELNAVRDEIVKQLQ 256 Query: 298 EKHEAEYVKKLRSNAIIH 315 ++ + V R+NA + Sbjct: 257 QQRVRDAVTAARANAKVE 274 >gi|300691434|ref|YP_003752429.1| peptidylprolyl isomerase; exported protein [Ralstonia solanacearum PSI07] gi|299078494|emb|CBJ51147.1| Putative Peptidylprolyl isomerase; exported protein [Ralstonia solanacearum PSI07] Length = 265 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 38/279 (13%), Positives = 66/279 (23%), Gaps = 46/279 (16%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +NG I + I Q + EL A L+ L +Q+ K G+ Sbjct: 27 AAVVNGHAIPSAKVDALIKK-SGQPDSPELRNRARDMLVDRELIEQDAAKRGL------- 78 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + + ++ + Sbjct: 79 -----------------------LSRDDVQEQLTQARLNVLVAAEFEDYVKNSPTTEDEL 115 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++ + + + + K + EE + Sbjct: 116 RKQYEKIKTQFGNGKEYHAHHILVDKEADAKAIIAKLKAGGNFEEIAR---------AQS 166 Query: 223 ASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDL-- 278 K + G + P+F L + TT P TQ G I + D RD Sbjct: 167 KDKGSGANGGDLDWANPGTYVPEFSAALTGLKKGETTQTPVKTQFGWHVIRLDDTRDAKI 226 Query: 279 GGEIALKAYLSAQNTPTK--IEKHEAEYVKKLRSNAIIH 315 +K L + +K LR A I Sbjct: 227 PAFEDVKPQLLEMMMGDQNWQRAKFQAMLKDLREKATIK 265 >gi|86143068|ref|ZP_01061490.1| putative exported peptidyl-prolyl cis-trans isomerase [Leeuwenhoekiella blandensis MED217] gi|85830513|gb|EAQ48972.1| putative exported peptidyl-prolyl cis-trans isomerase [Leeuwenhoekiella blandensis MED217] Length = 481 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 90/285 (31%), Gaps = 15/285 (5%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIEKSGITF 97 + + VI + DI + I LK QK+ G+ + +L+ + L + Sbjct: 58 DGVAAVVGEYVILESDIQQSIESLKQQKVEGQDLSTCSVMDKLMEDKLYAHHAVIDSVMI 117 Query: 98 DSN----TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + G + + ++ L ++ + + Sbjct: 118 NEEQIRSYTQQQIDYFVNQLGSEEKVLKFYRKEKMSDLKKELLELNRNQELAKAMQQNIV 177 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + EI + ++++ + ++ + + I Q QK I R + Sbjct: 178 EEIEVTPEEIRSYYKELEEDGLPQFGVELEISKIQIIPEVPQEEKQKVIDQLNGYRNDIL 237 Query: 214 KDCNKLEKFASKIHDVSI--GKAQYLL----ESDLHPQFQNLLKK-SQNNTTNPYVTQKG 266 ++ + A + G + +S +F+++ + + P+ T+ G Sbjct: 238 ENGSSFATKAVLWSEDESTRGDGGLIRDVDRKSQFVKEFRDVAFSLQEGEVSKPFETEFG 297 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 I + R + L+ L + E + ++K+R Sbjct: 298 YHIIKVEKIRGQKID--LRHILRIPKVTSAAEAAAKDKIEKIRKR 340 >gi|322807863|emb|CBZ05438.1| foldase protein PrsA precursor [Clostridium botulinum H04402 065] Length = 336 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 40/332 (12%), Positives = 103/332 (31%), Gaps = 21/332 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 S + +L ++ F +V A + +NGE I D+ + ++ ++ Sbjct: 1 MKSAKKLLSVLCLGIFILTFTACDMVEKTPEAKAKSTIAKVNGEKIQRKDLDESPSMQQV 60 Query: 66 QKING------------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 E +K ++ LI E + Q+ ++ + +N Sbjct: 61 LSQIKTQYGEEFEKSEQGKEVIKEQKKQVLENLITEKVLLQKGKELKVIPKDEELNKEAD 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + + ++ K+ L V++ + + + Sbjct: 121 KKVNEIKAVYNNDEKKFEETLKSTGFTKETLKEYLKDQIVIE-KVINEVTKDVKVEDKDA 179 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 QK N + + ++ ++ + +K K + + SK Sbjct: 180 QKYYNENQSMFTEKPNTMNVSHILVKTEDEAKKVKKRLDAKEDFAKVAKEVSQDPGSKDK 239 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALK 285 +G Y + + + + +N TQ G I + K++ + ++K Sbjct: 240 GGLLGDINYNDANFDPTFMKAAIALKEGTISNSVHTQWGYHIIKVNSKKEYPVKKFDSVK 299 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + Q K ++ + +++ + + I Y Sbjct: 300 EDIKKQLKQEKQQEAYTKKIEEWKKASKIKTY 331 >gi|322804319|emb|CBZ01869.1| foldase protein PrsA precursor [Clostridium botulinum H04402 065] Length = 247 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 31/282 (10%), Positives = 76/282 (26%), Gaps = 39/282 (13%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 M + I +NG+ ITD D+ I ++ + +ELI + + Sbjct: 1 MENNIVAIVNGQEITDRDVDNTILSFPKERQTYLNTEKGREELIKQMI------------ 48 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 E ++ + + + +++ Sbjct: 49 ------------------DFELSYNYAKDMKFDETEDFKKQLEATKKQLLIQIAVSNVLA 90 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + +K+ + + + + E Sbjct: 91 RATVSEEESKKYYEENKEEFRTQELITARHILVDSEEEANS------IYEEIKNGLDFSE 144 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKR 276 EK++ G + P+F+ + + + T TQ G I + + + Sbjct: 145 AAEKYSKCPSKAQGGSLGTFTRGQMVPEFEKAVLEAEVDKVTEAIKTQFGYHLIIVDNIK 204 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + +KA + + K + E+ + LR + Sbjct: 205 ESMIKPFDEVKAMIDNKLLQEKQNQQYNEFTQNLRDKYTVEI 246 >gi|37527725|ref|NP_931070.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787161|emb|CAE16237.1| Peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 623 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 33/399 (8%), Positives = 93/399 (23%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y + S +NG+ I+ + + Sbjct: 1 MMDNLRTAANSPVLKIVLALIILSFVLTGVGGYLTSGAGSY-AAEVNGQAISRAQLEQAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLK------------------ 86 + ++ A+ LI L Sbjct: 60 QQERNALQEQLGDKFSVLASDEQSMKQIRNQALDRLINNALIDQYSRELGLSASDEQVKD 119 Query: 87 ------------KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 K + K + ++ L + I Sbjct: 120 SIRNTSYFQTDGKFDNNKYLELLNRFNMSPDIFAEQTRQNLVNQQLIMAFSGSEIALPGE 179 Query: 135 KQYLAIQSIWPDVVK------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + A + + + + ++ K+ + ++ + Sbjct: 180 VKLNAELLLQQRTARIATLELKKIQAQQEVTDKDLQDYYNLNKSSFIASEEVKISYIKMD 239 Query: 189 D------------NKLQNQGFVQKRIKDAEESRLRLPKDCN------------------- 217 + KR E+ + L + Sbjct: 240 AVDEMNKVSATSADVDAYYEHNLKRYTQPEQKKYSLIQLATESEARTVFDELNKGADFGK 299 Query: 218 -KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 +K K + G+ ++ E L + + K + ++ G + D + Sbjct: 300 LATKKSTDKFSAKNHGEIGWMEEDALPEELKQANLKEKGQISSVIKVPNGFAIFHLDDVK 359 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + +++ + K +K+ A Sbjct: 360 PQIIKPLSEVRSEIEKMVKQEKAVDAFYALQQKVSDAAT 398 >gi|83719320|ref|YP_442657.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Burkholderia thailandensis E264] gi|167581594|ref|ZP_02374468.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia thailandensis TXDOH] gi|167619710|ref|ZP_02388341.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia thailandensis Bt4] gi|257138870|ref|ZP_05587132.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Burkholderia thailandensis E264] gi|83653145|gb|ABC37208.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia thailandensis E264] Length = 259 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 80/278 (28%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I IA L Q +LE+ QEL+ + QE K GI + Sbjct: 25 IAVVNGTPIPKSRADAMIAQLVQQGQQDTPQLEQAVRQELVNREILMQEAIKRGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q+ + DF+ K + Sbjct: 85 VKAQIV-------------------------------VAQQTAVLRALIEDFLKKNQPSD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A + + +++ KD K + + Sbjct: 114 TELKARYDDLVKNAGGREYHLHHILVDN----------EQQAKDLIAKIKGGAKFEDLAK 163 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F + + T+ P TQ G I + D R+ Sbjct: 164 QYSKDPGSAKNGGDLDWSDPKAYVPEFAAAAQHLQKGQMTDTPVKTQFGWHIIRVDDIRN 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + Q +++ + + LR A I Sbjct: 224 ITP--PPFEQVKQQIAQQMVQQKLQAFEEGLRQQAKIQ 259 >gi|317012021|gb|ADU82629.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori Lithuania75] Length = 299 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 30/281 (10%), Positives = 76/281 (27%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + + Sbjct: 40 SSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIEQAI-------RTALV 91 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 ++ + L + + + + K Sbjct: 92 ENEAKTEKLDSTPEFKAMMEAVKKQALVEFWAKK-----------------QAEEVKKVQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + + T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR A I Sbjct: 255 DSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKRAKI 295 >gi|168185280|ref|ZP_02619944.1| peptidil-prolyl isomerase family protein [Clostridium botulinum Bf] gi|237793360|ref|YP_002860912.1| peptidil-prolyl isomerase family protein [Clostridium botulinum Ba4 str. 657] gi|182671671|gb|EDT83632.1| peptidil-prolyl isomerase family protein [Clostridium botulinum Bf] gi|229264108|gb|ACQ55141.1| peptidil-prolyl isomerase family protein [Clostridium botulinum Ba4 str. 657] Length = 247 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 31/282 (10%), Positives = 77/282 (27%), Gaps = 39/282 (13%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 M + I +NG+ ITD D+ I ++ + +ELI + + Sbjct: 1 MENNIVAIVNGQEITDRDVDNTILSFPKERQTYLNTEKGREELIKQMI------------ 48 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 E ++ + + + +++ Sbjct: 49 ------------------DFELSYNYAKDMKFDETEDFKKQLEATKKQLLIQIAVSNALA 90 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + +K+ + + + + + E Sbjct: 91 RATVSEEESKKYYEENKEEFRTQELITARHILVDSEEEA------NNIYEEIKNGLDFSE 144 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKR 276 EK++ G + P+F+ + + + T TQ G I + + + Sbjct: 145 AAEKYSKCPSKAQGGSLGTFTRGQMVPEFEKAVLEAEVDKVTQAIKTQFGYHLIIVDNIK 204 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + +KA + + K + E+ + LR + Sbjct: 205 ESMIKPFDEVKAMIDNKLLQEKQNQQYNEFTQNLRDKYTVEI 246 >gi|325851850|ref|ZP_08171015.1| PPIC-type PPIASE domain protein [Prevotella denticola CRIS 18C-A] gi|327312553|ref|YP_004327990.1| PPIC-type PPIASE domain-containing protein [Prevotella denticola F0289] gi|325484692|gb|EGC87605.1| PPIC-type PPIASE domain protein [Prevotella denticola CRIS 18C-A] gi|326946030|gb|AEA21915.1| PPIC-type PPIASE domain protein [Prevotella denticola F0289] Length = 480 Score = 83.6 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 28/268 (10%), Positives = 72/268 (26%), Gaps = 14/268 (5%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETL 85 VP + ++ + + + E I ++ + + + G+ E + +++ V+ L Sbjct: 42 VPAATDRANNVVDEVIWVVGDEPILKSEVEIMKLQGEAEGMKWDGDPECVLPEQIAVQKL 101 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTG--LSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + I + + Q + Q +Q L Sbjct: 102 FLHQAALDSIEVTESEIAQGIDQQINYWISLPQIGSKEKLEEFQHKSMAQIRQDLHDDYK 161 Query: 144 WPDVVKN---DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 +V+ + E+ +K+ ++ + + + + Sbjct: 162 NRQLVQKMQEKLVSDVKVSPAEVREYFRKLPVDSIPMIPTTVEVEILTQTPKVEPEEINR 221 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKKSQN 255 + R+ K A G+ Y+ L P F + Sbjct: 222 IKNQLRDYTDRITKGETSFATLARLYSEDPGSARQGGELGYMGRGMLDPAFAAAAFNLTD 281 Query: 256 --NTTNPYVTQKGVEYIAICDKRDLGGE 281 + ++ G I + D+R Sbjct: 282 PKKVSKVVESEFGYHIIQLIDRRGDKVN 309 >gi|212640109|ref|YP_002316629.1| Parvulin-like peptidyl-prolyl isomerase (molecular chaperone) [Anoxybacillus flavithermus WK1] gi|212561589|gb|ACJ34644.1| Parvulin-like peptidyl-prolyl isomerase (molecular chaperone) [Anoxybacillus flavithermus WK1] Length = 288 Score = 83.6 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 26/284 (9%), Positives = 78/284 (27%), Gaps = 40/284 (14%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 S + IT ++ + K +++L+ E + ++ + + Sbjct: 30 CNNGSDVVVETKEGNITKEELYNEMK--------ERYGKDVLRDLVHEKVLSKKFKVTDE 81 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + N + + ++ + + + M Sbjct: 82 ELNKEIENLKEMYGIQYDLAVQQNGEEA--------------IRDMVKLDLLRQKAAMED 127 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + E+ + K +++ +K KD + + Sbjct: 128 IKVTDEELKKYYNEYKPKVKASHIL---------------VDDEKTAKDIKAKLEKGEDF 172 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC 273 ++++ + G + + +F+ + ++P TQ G I + Sbjct: 173 AKLAKEYSKDTGSAQNGGDLGWFGPGKMVEEFEKAAYALNVGEISDPVKTQFGYHIIKVT 232 Query: 274 DKRDLGGEIALKAYLSAQNTPTKIE-KHEAEYVKKLRSNAIIHY 316 DK +K + + +K++ + +L A + Sbjct: 233 DKEKKKSFDEMKEEIEFEVKKSKLDTSKVQSKLDELMKEANVDI 276 >gi|288924570|ref|ZP_06418507.1| peptidyl-prolyl cis-trans isomerase [Prevotella buccae D17] gi|288338357|gb|EFC76706.1| peptidyl-prolyl cis-trans isomerase [Prevotella buccae D17] Length = 474 Score = 83.6 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 89/302 (29%), Gaps = 40/302 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + T +L+ + ++Y A + + T+NG ++ + G ++K Sbjct: 1 MKTATLLVAMLLCGSMAY---AQNDPVVMTVNGAPVSRSEFEYSYN---KNNSEGVIDKK 54 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 V E + + N L + Sbjct: 55 TVGEYVDLFV--------------------------NYKLKVQAALDARLDTMSSFKKEF 88 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + P +V +I Q+ + +L + N + Q Sbjct: 89 REYRDQQVRPTLVT---DADVEAKARDIYRETQQRVDGGGGLLKTSHILLLLDQNATKTQ 145 Query: 196 GFVQKRIKD-AEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK- 252 K D + + + + + V+ G+ ++ + L ++++ Sbjct: 146 QDAAKARIDSVYNALKKGADFADLARRLSDDKSSAVNGGQLPWIERNQLVKAYEDVAYAL 205 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + P++++ G + + DK+ ++K + + +L+ A Sbjct: 206 KKGEISKPFLSEYGYHIVKLDDKQPFFPYDSVKTSIYQFIESRGLRDAIVT--DRLQEEA 263 Query: 313 II 314 + Sbjct: 264 KV 265 >gi|254252165|ref|ZP_04945483.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia dolosa AUO158] gi|124894774|gb|EAY68654.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia dolosa AUO158] Length = 260 Score = 83.6 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 85/278 (30%), Gaps = 47/278 (16%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I +A L + Q + +L++ QEL+ + QE + GI + Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIREGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + +F+ K + Sbjct: 85 VKAQV-------------------------------AVAQQTVVLRAMIENFLKKNQPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A ++ +++ K+ K + + Sbjct: 114 AEVKARYDELVKGAGGNREYHLHHIL---------VDSEQQAKELIAKIKAGAKFEDLAK 164 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F +K + T+ P TQ G I + D RD Sbjct: 165 QYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDQPVKTQFGWHIIRVDDIRD 224 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + AQ +++ + + LR A I Sbjct: 225 IAP--PPFDQVKAQIAQQIVQQKLQAFEEGLRQQAKIQ 260 >gi|187477572|ref|YP_785596.1| protein foldase [Bordetella avium 197N] gi|115422158|emb|CAJ48682.1| putative protein foldase [Bordetella avium 197N] Length = 258 Score = 83.6 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 88/278 (31%), Gaps = 46/278 (16%) Query: 43 RTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 T+NG+ I+ + + LL Q + +L QE+I + Q EK GI + Sbjct: 22 VATVNGKAISQKSVDDFVKLLVTQGATDSPQLRDQVKQEMINRQVFVQAAEKQGIAKQVD 81 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 T LA Q I + D++ K+ + Sbjct: 82 TQTEI-------------------------------ELARQGILVRALMADYLKKHPVTD 110 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A +K+K + + D K N Q + K + + Sbjct: 111 AEVKAEYEKIKKEQAGKQEYDVRHILVEDEKTANDLLAQIKSGK--------LKFEDAAK 162 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRD 277 K++ G + S+ P F + + K + P TQ G I D R Sbjct: 163 KYSKDPGSAERGGDLGWAPASNYVPPFADAITKLKKGEIADKPVQTQFGWHIIQEKDAR- 221 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 E + +Q ++ + K+LR A + Sbjct: 222 -AVEFPPLDQVRSQLEEMMRQQKLNAFQKELREKAKVQ 258 >gi|196036230|ref|ZP_03103629.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus W] gi|218902361|ref|YP_002450195.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus AH820] gi|228926303|ref|ZP_04089377.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228944873|ref|ZP_04107236.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195991205|gb|EDX55174.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus W] gi|218539904|gb|ACK92302.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus AH820] gi|228814901|gb|EEM61159.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228833400|gb|EEM78963.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 285 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 28/304 (9%), Positives = 75/304 (24%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + +++ SS T IT D K++ K Sbjct: 4 KHIFIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E+I + + ++ + S + + + + Sbjct: 56 LYEMIAQDVITKKYKVSDDDVEKEVQKAKSQYGDQFKNVLKNNGLKDEADF--------- 106 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 107 --KNQIKFKLSMNKAIKQSVTEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFHSGAMTPEFETAAYKLKI 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 ++P + G I + K+DL +K + + + ++ A Sbjct: 205 GQISDPVQSPNGYHIIKLTGKKDLKPYDEVKNSIRKNLEEERTADPIFGKKLLQSELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|146296230|ref|YP_001180001.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409806|gb|ABP66810.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 335 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 31/285 (10%), Positives = 86/285 (30%), Gaps = 20/285 (7%) Query: 39 SSRIRTTINGEVITDGDISKRIAL---------------LKLQKINGELEKIAVQELIVE 83 +R +NGE IT + S + + ++++ + LIV Sbjct: 34 ENRAVAIVNGEKITKKEFSINYKSQIDYYGLDKAFLAQKVGSKTYEEQIKENVLDGLIVR 93 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 ++ Q+ +K I + Q + + + Q I Sbjct: 94 QIELQQAKKRNIILTAQEKKAIEDQINQYKNDPQNGLQF--KQYLQTIGATEDEYKDQII 151 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 +V F N + + + ++ + + + +K+ + Sbjct: 152 KSQIVSKLFNELTKNQTASMFEIESYYNSHKTDYIKVKASHILFKVSDSKEETTKKKKAE 211 Query: 204 DAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPY 261 + + +K++ + G Y + ++ +F+++ + Sbjct: 212 EVLQMIKNGQNFEKLAKKYSEDENTKQKGGDLGYFRKGEMVKEFEDVAFSLGIGEISGIV 271 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 T G I + D++ L +K + + K +++ ++ Sbjct: 272 KTSYGFHIIKVTDRKQLALN-DVKDEIKSTIETQKKQQYFQSLIE 315 >gi|228938382|ref|ZP_04100992.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971261|ref|ZP_04131889.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977871|ref|ZP_04138252.1| Foldase protein prsA 2 [Bacillus thuringiensis Bt407] gi|228781788|gb|EEM29985.1| Foldase protein prsA 2 [Bacillus thuringiensis Bt407] gi|228788411|gb|EEM36362.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821244|gb|EEM67259.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938890|gb|AEA14786.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar chinensis CT-43] Length = 285 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 80/304 (26%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T +T D K+ LK + L ++ Sbjct: 4 KHIFIITALISILMLSACGQKNGSATVATATDSTVTKDDFEKQ---LKDRYGKDMLYEMM 60 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 Q++I + K VN + + G F ++ Sbjct: 61 AQDVITKKYK----------VPDEEVNKEIEKVKKQYG------DQFKKVLENNRLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSITEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ + ++ + + G Y + P+F+ K + Sbjct: 145 SDENEAKEIKSKLDAGASFEELAKQESQDLLSKDKGGDLGYFNSGTMAPEFETAAYKLNV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+DL +K + + + +++ A Sbjct: 205 GQISNPVKSSNGYHVIKLTDKKDLKPYDEVKNSIRKNLEEERTADPAFSQKLLQEELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|139439422|ref|ZP_01772863.1| Hypothetical protein COLAER_01883 [Collinsella aerofaciens ATCC 25986] gi|133775201|gb|EBA39021.1| Hypothetical protein COLAER_01883 [Collinsella aerofaciens ATCC 25986] Length = 407 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 35/352 (9%), Positives = 112/352 (31%), Gaps = 45/352 (12%) Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPI----------VSYKSWAMSSRIRTTINGEVITD 53 K + S + I L+ + ++ + + + + ++ + TING +T+ Sbjct: 30 KTYVSKTVKIVLVVIGVLAMLLSVSAMACSGLMSQTESASSGYKLTGGVAATINGTNLTE 89 Query: 54 GDISKRIALLKLQK-----------------INGELEKIAVQELIVETLKKQEIEKSGIT 96 ++K+I ++ + K + + L +Q +++G+T Sbjct: 90 DTVTKQIMSMRTSYGYTKDKDWAQYLVDNDLTPKKYRKQLIDSYAQQILLQQAQKENGVT 149 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 V + ++ G + + + +S+ +K+ Sbjct: 150 VSDEEVEKAWKDACKSAGGAKAFKKTLKT--YGYTEDTYKDSLKESLAQQKLKDAVAPTS 207 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN-KLQNQGFVQKRIKDAEESRLRLPKD 215 + EI + + +L + + +++ + + ++ + Sbjct: 208 KPKDSEIVDYINENLSNYNDARRSSNILIKVDSDASDEDKAAAKAKAQECLDKINSGELS 267 Query: 216 CNKL-EKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA- 271 E+++ G + + +Q ++ + ++ + G I Sbjct: 268 FEDAVEQYSDDTGSKDKKGDVGWDKLTTFVDSYQAALEGLNKGDVSDVVESTYGYHIIKC 327 Query: 272 ---------ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + D + + + +K Y+S +E++++ + +A I Sbjct: 328 TDYFHVDNQVDDIKQVPKD--IKKYVSNVVKTQAASTAYSEWLEQYKKDADI 377 >gi|154174986|ref|YP_001408954.1| ferric receptor CfrA [Campylobacter curvus 525.92] gi|153793160|gb|EAU01437.2| ferric receptor CfrA [Campylobacter curvus 525.92] Length = 291 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 102/320 (31%), Gaps = 35/320 (10%) Query: 1 MTSKVFTSL--SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK 58 M +FT+ FI +F + + + S M + I + E IT ++ + Sbjct: 1 MAQIIFTNYLNKGFIMTKKLFFAASVCAALNLFS---AQMVNGIAAIVENEPITLYEVYQ 57 Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 LK + A+ LI + L++ +I+ GI+ VN A+ G+++ Sbjct: 58 LKEQLKTDES------QALNLLIRDRLEQAQIKNLGISVTPFEVNERIDAIAKQNGMTST 111 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 F S ++ QG FK + + + + +N N+ E + + Sbjct: 112 QFRSSVESQGTSFTDFKNEVEKKMLQEKLYRNIASEAGKNVTDERAKAYYEANKEQFNIF 171 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 ++ + + + K L + Sbjct: 172 NSAEIVLFRAASMQELENQRGKLSPLKGVQAQNLTLEYQSAN------------------ 213 Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTK 296 + + + T + TQ+G + + +K +K + + Sbjct: 214 ----PQLASIIANTAIGDFTQIFKTQEGFDMFYVKNKIGSYTPSFDQIKDEIINSLYQNE 269 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 +K +Y KLR+ A + Sbjct: 270 QQKTMQDYFDKLRAKAKVQI 289 >gi|218896199|ref|YP_002444610.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus G9842] gi|228964209|ref|ZP_04125331.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar sotto str. T04001] gi|218545279|gb|ACK97673.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus G9842] gi|228795460|gb|EEM42945.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar sotto str. T04001] Length = 285 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 80/304 (26%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T +T D K+ LK + L ++ Sbjct: 4 KQIFIITALISILMLSACGQKNESATVATATDSTVTKDDFEKQ---LKDRYGKDMLYEMM 60 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 Q++I + K VN + + G F ++ Sbjct: 61 AQDVITKKYK----------VSDEEVNKEVEKVKKQYG------DQFKKVLENNGLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSITEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ + ++ + + G Y + P+F+ K + Sbjct: 145 SDENEAKEIKSKLDAGASFEELAKQESQDLLSKDKGGDLGYFNSGTMAPEFETAAYKLNV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+DL +K + + + +++ A Sbjct: 205 GQISNPVKSSNGYHVIKLTDKKDLKPYDEVKNSIRKNLEEERTADPVFSKKLLQEELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|15644804|ref|NP_206974.1| cell binding factor 2 [Helicobacter pylori 26695] gi|2499779|sp|P56112|Y175_HELPY RecName: Full=Uncharacterized protein HP_0175; Flags: Precursor gi|2313264|gb|AAD07245.1| cell binding factor 2 [Helicobacter pylori 26695] Length = 299 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 30/281 (10%), Positives = 77/281 (27%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + + Sbjct: 40 SSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIDQAI-------RTALV 91 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 ++ + L + + + + K Sbjct: 92 ENEAKTEKLDSTPEFKAMMEAVKKQALVEFWAKK-----------------QAEEVKKVQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + + T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295 >gi|153873081|ref|ZP_02001781.1| survival protein SurA [Beggiatoa sp. PS] gi|152070452|gb|EDN68218.1| survival protein SurA [Beggiatoa sp. PS] Length = 328 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 35/278 (12%), Positives = 87/278 (31%), Gaps = 7/278 (2%) Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELI---VETLKKQEIEKSGITFDSNT 101 +N ITD +I +A Q E + LI + K + Sbjct: 38 VMNRITITDREIENFLATQTQQGTISN-EYHILHILIATPEAPSPENITLKQQKAEEVVA 96 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 ++ + + + + ++ + Sbjct: 97 KLKQGADFEATAVAISDSRQALDGGDLGWLKAGEMPTLFDGVVNQMKVDEIKGPLRDSSG 156 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + + + + + N+L + ++ R+K+ + E Sbjct: 157 FHIIKLVEKRGGKIAITQTKARHILMKTNELMSDVEIEFRLKEIKSRIELGDDFAKLAEA 216 Query: 222 FASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD-L 278 ++ G ++ DL +F+ ++ S N ++P+ ++ G + + ++R Sbjct: 217 YSEDTGSAAKGGSLGWVNPGDLATEFEAVMNDLSVNKVSDPFKSRFGWHIVQVLERRQHD 276 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 E AL+ + Q K+ + ++++LR A I Y Sbjct: 277 NTEQALRYQAARQIHQRKVYEELEAWLRQLRDQAYIDY 314 >gi|260682966|ref|YP_003214251.1| putative peptidyl-prolyl isomerase [Clostridium difficile CD196] gi|260686564|ref|YP_003217697.1| putative peptidyl-prolyl isomerase [Clostridium difficile R20291] gi|296451354|ref|ZP_06893092.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP08] gi|296880296|ref|ZP_06904261.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP07] gi|260209129|emb|CBA62320.1| putative peptidyl-prolyl isomerase [Clostridium difficile CD196] gi|260212580|emb|CBE03572.1| putative peptidyl-prolyl isomerase [Clostridium difficile R20291] gi|296259770|gb|EFH06627.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP08] gi|296428739|gb|EFH14621.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP07] Length = 261 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 31/281 (11%), Positives = 77/281 (27%), Gaps = 46/281 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIA----LLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 M ++ T+ + IT+ DI + +Q E +K + +L+ + L + ++ Sbjct: 11 MEKKVLATVGEKEITNIDIENALKSLDPYQAMQFKTEEGKKHLLNDLVNQELFFLDAKE- 69 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + +++ N + Sbjct: 70 ------------------------------EKLDEEEIFKLEMKKIEENVLKQFAINKVL 99 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 E E + K+ + + ++ + Q + ++ Sbjct: 100 SSVNVTEDEKVKFFEANKSSFSKPESATAKHILVDSDEKAKEILAQIKSEEI-------- 151 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAI 272 + K +S G + P+F+ ++ + P TQ G I + Sbjct: 152 SFEDAALKHSSCPSKDMGGDLGTFGRGQMVPEFEEAVFSMAKGEVSEPVKTQFGYHIIKL 211 Query: 273 CDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 D ++ +KA + K + + L + Sbjct: 212 EDLQESTESTFDEVKAEVEKSLLYQKQNEVYGNKINALNAK 252 >gi|299142781|ref|ZP_07035910.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella oris C735] gi|298575810|gb|EFI47687.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella oris C735] Length = 464 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 32/289 (11%), Positives = 82/289 (28%), Gaps = 17/289 (5%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQE 89 S ++ + + E I D+ + +++ + G + +++ V+ L + Sbjct: 30 SVPEHSVIDEVVWVVGDEPIMKSDVEQMRLQGEMEGMKWGGNPDCRIPEQIAVQKLFLHQ 89 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 I + + Q SA + QG + + L +++ Sbjct: 90 AALDSIEVTESDIAQTVEQQINYWINSAGSREKLEEYQGKSLSQIRSDLHDDVKNSKMIQ 149 Query: 150 N---DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M ++ + + ++ + + Q + + Sbjct: 150 QMKRKIMSDVTVTPADVRRYFKNLPEDSIPFVPTEVEVEILVKKPRIPQSEINRVKDQLR 209 Query: 207 ESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKKSQN--NTTN 259 R+ K A G+ Y L P F ++ + + Sbjct: 210 SFTDRVTKGETSFSTLARLYSEDPGSARQGGEMDYAGRGTLDPAFASVAFNLTDPKKISK 269 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++ G I + DKR G+ ++ P + + + +L Sbjct: 270 IVESEFGYHIIQLVDKR---GDKVKVRHIL--LKPKVSAEDLNKALGRL 313 >gi|302876603|ref|YP_003845236.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium cellulovorans 743B] gi|307687277|ref|ZP_07629723.1| peptidylprolyl isomerase [Clostridium cellulovorans 743B] gi|302579460|gb|ADL53472.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium cellulovorans 743B] Length = 342 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 39/338 (11%), Positives = 98/338 (28%), Gaps = 32/338 (9%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR---IRTTINGEVITDGDISKRIALLKL 65 + KL+T + + + +++ + + E IT GD+ + I + Sbjct: 1 MKSIKKLVTAALIGAMVVGATGCGFLEKTETNKAKEVVAKVGDEKITKGDVDEEIKYMIE 60 Query: 66 QKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 Q E K + L+ L Q ++ + I + + + Sbjct: 61 QAKTQYGEDYASNEEAMKGINEQRKTTLSALVDLKLLLQYVKDNNIEINEDEMEAEVDNA 120 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML------KYGNLEMEI 163 + ++ + DN + I + + + + +++ Sbjct: 121 YKQARDQYGSGDDATFEKLLQDNGYTLEKYKDDIKNAYISSKAREAMSKGAEVTDADIDA 180 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKF 222 K + ++ +L + + +K+I DA + ++ + +K+ Sbjct: 181 SFKKDEFLTQNANAKFVQYLLCKVESSATPEDRAAKKKIADAALAEIKGGLSFTDAAKKY 240 Query: 223 ASKIH-DVSIGKAQYLLESD-LHPQFQNLLKK-SQNNTTNPYVTQ-KGVEYIAICDKRDL 278 + + G + L F+N+ + + G I + Sbjct: 241 SDDPSTKDNGGYLGAVTSESGLVEGFKNVAIGLNPGQMSEVVDEPTFGFFIIKSISTDEA 300 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K TK + E +++LR Y Sbjct: 301 IAFEKEKQ--KTTLLQTKQSEKAEEILQQLRDEKSTKY 336 >gi|194366009|ref|YP_002028619.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Stenotrophomonas maltophilia R551-3] gi|194348813|gb|ACF51936.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Stenotrophomonas maltophilia R551-3] Length = 299 Score = 83.2 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 23/271 (8%), Positives = 74/271 (27%), Gaps = 40/271 (14%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 ++ I++ DI++ + + + A + L+V L + E ++ G Sbjct: 48 VDETAISEADIAREMQHHRA-MRPEQSRAEAARALVVRELLRLEAQRLG----------- 95 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + + + + ++++ + E Sbjct: 96 -----------------------LQAPEGNRVSDEEVLIQQLLEDAIEDRVPTDEDCRRY 132 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD--CNKLEKFA 223 +Q + + + + F + + L+ + + + Sbjct: 133 FEQNPERFRSPDRVRLRHILLAAPADDVAGRFAARTEGERLVGLLKESPHLFADFALRHS 192 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRD--LGG 280 G +L P+F + + + P ++ G + + + + Sbjct: 193 RCPSSSEGGDLGWLQRGQTTPEFDRQVFRLREGLAGFPVESRWGYHVVCVDAREEGQPQP 252 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 A+ L ++ Y+ +L+ Sbjct: 253 FEAVLPQLRDYLELQVRQREVQAYLLQLQER 283 >gi|261837623|gb|ACX97389.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori 51] Length = 299 Score = 83.2 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 81/281 (28%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + ++ +E T Sbjct: 40 SSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIDQAIRTALVENEAKT- 97 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + E + + F + + + K Sbjct: 98 -------------ERLDSTPEFKAMMEAVKKQALVEFWAKK----------QAEEVKKIQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + + T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYDQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295 >gi|322381189|ref|ZP_08055192.1| molecular chaperone lipoprotein-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154765|gb|EFX47036.1| molecular chaperone lipoprotein-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 351 Score = 83.2 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 32/311 (10%), Positives = 92/311 (29%), Gaps = 14/311 (4%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-NGEVITDGDISKRIAL------- 62 + + +I + + + T +T G+++K I + Sbjct: 7 RILNKWILALITVILTVSVLSGCGKDKGDKEVVATYKENGKVTRGELNKLIGMNNIFNPA 66 Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 K + ++ ++++I+ + + + + V Q + Sbjct: 67 YKQFAEDPAYQQSMLKQIIMFKEAEAKADDAAKKEADKKVQDQMKQMKQILDQQEGGADK 126 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 L + + + L + + ++ I Sbjct: 127 VLKDEKMELKDIENILKQNFYASKEFEKQVTEDETKKAYDENLAQEPNAYEVEDVSHILI 186 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD 241 L L+N+ + R + + + ++++ GK + + S Sbjct: 187 GLKDQEGKDLRNKDEAKTRALEVKGKLEKGEDFAALAKEYSDDPGSKDKGGKYEKVDYSQ 246 Query: 242 L----HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + P Q +N ++P T G + + +++ + +K + +Q + K+ Sbjct: 247 MMQFVEPFKQAAWSLEENKISDPVETDYGYHIMKVENRKKQTYDE-VKDQIRSQLSQKKM 305 Query: 298 EKHEAEYVKKL 308 + + V KL Sbjct: 306 RDYIEQEVPKL 316 >gi|163751873|ref|ZP_02159087.1| peptidyl-prolyl cis-trans isomerase D [Shewanella benthica KT99] gi|161328223|gb|EDP99387.1| peptidyl-prolyl cis-trans isomerase D [Shewanella benthica KT99] Length = 621 Score = 83.2 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 41/409 (10%), Positives = 102/409 (24%), Gaps = 96/409 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + I V+ F + SY + + T+NGE I++ + + Sbjct: 1 MLEKIREASQGVIAKSILVLVIFSFAFSGVSSYLGSSTEAA-AATVNGEEISESALEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +++ ++ L+ E L Q + G+ + Sbjct: 60 QSERARLEQQLGEMFQALAADDTYLASVKQSVLERLVAEKLLDQSATELGLRVSDQQIKN 119 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK------ 155 + + + + + L + G N F+ + +V + + Sbjct: 120 AIMTEPAFQTDGQFDNDRYLAILRQLGYQANTFRNMMRTDMTRRQLVASLVGSEFVLPGE 179 Query: 156 ---------------------------YGNLEMEIPANKQKMKNITVREYLIRTVLFS-- 186 + + + + + Sbjct: 180 ISYLAGIQGQTRDIRYHIVDASPFVADVEVTDEQAQSFFDANLAQFMSPETLSLEYIELN 239 Query: 187 -----------------IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 D Q +KR+ L + +K + A Sbjct: 240 ATDMANDVTVTDAEAQAYYDENKQQYLKAEKRLAAHILINLGDDESASKAKAEAIYAKLQ 299 Query: 230 SI--------------------GKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVE 268 + G+ + + + F ++ S+ + + T G Sbjct: 300 AGDDFAQLAKTESEDTFSGEQGGQLDWFEQGVMELAFDDVLYSLSKGSYSTVVKTSFGYH 359 Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN-AIIHY 316 I + D + A + + +K + L+ A + Y Sbjct: 360 IIKLLDIQPEV--EAPFVDVKDKIIAQLKDKAAVDTYYGLQQTLADVTY 406 Score = 38.5 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 31/261 (11%), Positives = 65/261 (24%), Gaps = 8/261 (3%) Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 I LL +Q ++I + K ++ + + V + S Sbjct: 361 IKLLDIQPEVEAPFVDVKDKIIAQLKDKAAVDTYYGLQQTLADVTYEVPDTLSEAASELG 420 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 N + + N + + +EI AN + I Sbjct: 421 VEVMTSPVFTRTNAPAPFDNSDVLKAAFSTNVLFDRMNSDVIEIDANHAMVIRIKSHTAA 480 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 K+ + E +R + + S V+ + Sbjct: 481 G----TVDFTKVKAAIVERLKQEQANEVARDKAQTLMSSFNDAESSTEFVTKTNLGRFEQ 536 Query: 240 SDLHPQFQNLLKKSQNNTTNPYVT---QKGVEYIAICDKRDLGG-EIALKAYLSAQNTPT 295 + +Q + T G I + G + L + L + + Sbjct: 537 GIDAAITSKAFQMAQPADSAVVDTVALANGYAVIVLDKVNAAEGIDDNLLSALKQRLSAQ 596 Query: 296 KIEKHEAEYVKKLRSNAIIHY 316 E + L++ A + Y Sbjct: 597 YSEGDYRAMIAILKAKADVVY 617 >gi|190574687|ref|YP_001972532.1| putative rotamase/peptidyl-prolyl cis-trans isomerase family protein [Stenotrophomonas maltophilia K279a] gi|190012609|emb|CAQ46237.1| putative rotamase/peptidyl-prolyl cis-trans isomerase family protein [Stenotrophomonas maltophilia K279a] Length = 299 Score = 83.2 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 23/271 (8%), Positives = 75/271 (27%), Gaps = 40/271 (14%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 ++ I++ DI++ + + + A + L+V L + E ++ G Sbjct: 48 VDETAISEADIAREMQHHRA-MRPEQSRAEAARALVVRELLRLEAQRLG----------- 95 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + + + + ++++ + + E Sbjct: 96 -----------------------LQAPEGNRVSDEEVLIQQLLEDAIKDRVPSDEDCRRY 132 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD--CNKLEKFA 223 +Q + + + + F + + L+ + + + Sbjct: 133 FEQNPERFRSPDRVRLRHILLAAPADDVAGRFAARTEGERLVGLLKESPHLFADFALRHS 192 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRD--LGG 280 G +L P+F + + + P ++ G + + + + Sbjct: 193 RCPSSSEGGDLGWLQRGQTTPEFDRQVFRLREGLAGFPVESRWGYHVVCVDAREEGQPQP 252 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 A+ L ++ Y+ +L+ Sbjct: 253 FEAVLPQLRDYLELQVRQREVQAYLLQLQER 283 >gi|269216505|ref|ZP_06160359.1| putative peptidylprolyl isomerase PrsA3 [Slackia exigua ATCC 700122] gi|269130034|gb|EEZ61116.1| putative peptidylprolyl isomerase PrsA3 [Slackia exigua ATCC 700122] Length = 424 Score = 83.2 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 28/325 (8%), Positives = 84/325 (25%), Gaps = 47/325 (14%) Query: 29 PIVSYKSWAMSSR---IRTTINGEVITDGDISKRIALLKLQKI----------------- 68 + + +S + T+NG I + +S +A + Sbjct: 34 SGSAGAAPDISDTSGGVAATVNGTDIGENAVSSYVANFRNLNSLNEDTDWAQWMVDNGYT 93 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 +L K + + + L +Q E++ + D + V+ N + + + Sbjct: 94 AEDLRKEVINYYVSQELVRQAAEQNNVKVDEDAVDEQLNTMKMNYDSDGDGSLNADETAS 153 Query: 129 IGDNHFKQYLAIQSIWPDVV---------KNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 +A + + ++ + + + ++ Q Sbjct: 154 WNKALQAVGIASEDEYRTLLEMYSLEASLQKAVVPDTAPSDEDMLQYAQMYATAYDGAKK 213 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLL 238 +LF + ++ +++++ G + + Sbjct: 214 SSHILF--------ASDDQATAQEVLDKINSGELDFAEAAKQYSTDTASAADGGNVGWDV 265 Query: 239 ESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY--------LS 289 + ++ + L + + ++ G+ I E+ + Sbjct: 266 LNSFVKEYTDALSGLGEGEVSGLVTSEYGIHIIKCTQVFKTPEEVTSVDQIPSEWLDSIK 325 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAII 314 A + K +A I Sbjct: 326 ASLQQANKTSAYKAWFKDFYDSADI 350 >gi|308182349|ref|YP_003926476.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori PeCan4] gi|308064534|gb|ADO06426.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori PeCan4] Length = 299 Score = 83.2 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 81/281 (28%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + ++ +E T Sbjct: 40 SSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIDQAIRTALVENEAKT- 97 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + E + + F + + + K Sbjct: 98 -------------ERLDSTPEFKAMMEAVKKQALVEFWAKK----------QAEEVKKIQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYDANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKTKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + N T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGNYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYDQAKPTIKGMLQERLFQERMNQRIEELRKHAKI 295 >gi|42521667|ref|NP_967047.1| parvulin-like peptidyl-prolyl isomerase [Bdellovibrio bacteriovorus HD100] gi|39574197|emb|CAE77701.1| Parvulin-like peptidyl-prolyl isomerase [Bdellovibrio bacteriovorus HD100] Length = 322 Score = 83.2 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 96/308 (31%), Gaps = 27/308 (8%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL---------LKLQ 66 LT F+ + + S +S++ +N V+T + ++A K Sbjct: 9 LTGLFIFMSLALAGCPS-SYQKLSTKPVEKVNDHVLTSKQFANQLARRLRNFDALAAKDP 67 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 +++ +++ +V++L I NT++ + N F L Sbjct: 68 NNIHRIKEEILRDFLVKSLTLDWARAQSIVISENTLDKEVDKLRANYPDDL-SFRRALAL 126 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + + + +++ L + +V K E EI + K+ R+ + Sbjct: 127 ENLSFSEWREELRYSLVEREVFKKINEKVKAPTEEEIKRYYEDNKDRYKRKERVFLRQIV 186 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + ++ + V L+ K++ G ++ + + Sbjct: 187 VDEDAKADAIKVD----------LKTGDFAELARKYSITPEAKQGGVVGWIEKGTVD--- 233 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEY 304 + + + G+ I + K +K + + + + Sbjct: 234 YFDPLFNVGSGVQTIKSPFGIHLIRVEKKAPASTLSLEEVKPQIIRALRAQREQAEYVAW 293 Query: 305 VK-KLRSN 311 + +LRS+ Sbjct: 294 LDAQLRSS 301 >gi|220934121|ref|YP_002513020.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thioalkalivibrio sp. HL-EbGR7] gi|219995431|gb|ACL72033.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thioalkalivibrio sp. HL-EbGR7] Length = 633 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 47/407 (11%), Positives = 102/407 (25%), Gaps = 101/407 (24%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + +I + + I F + + Y A + + +NG I + Sbjct: 1 MLQKIRDKATGWIAYVIVILISIPFALWGLNEYFGGAPAQ-VVAEVNGVEIPARAYQQEF 59 Query: 61 ALLKLQK-------------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + Q + + A+Q LI L Q E G ++ V Sbjct: 60 QQQRQQLAQMFGGRIPSGAVDENMMRENALQTLIRRELVAQMAEDKGFRISASAVASEIR 119 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK--------------- 149 R+ E + ++ Q F+ +A + Sbjct: 120 AVPGFQRDGVFDPERYRQIMESQRRSPAEFEARVAQAMLLEQFQSGYQRSAFLPEAMVED 179 Query: 150 ------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRT--------- 182 + + E +I A + +R Sbjct: 180 FVRLRHERRQVSVHRFPAEAYAERVQVSEDDIAAFYAEHGEQFQTPERLRLAYLLLDDAT 239 Query: 183 ---VLFSIPDNKLQNQGFVQKRIKDAEESRLR---------------------------L 212 + D+ + R EE R Sbjct: 240 LAEQVSVTEDDLRREYEQRSDRFTQPEERRASHILIRVEPGADADTVAAAEARAREARAR 299 Query: 213 PKDCNKLEKFASKIHDV-----SIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKG 266 + + A + D + G Y+ D+ P + + + + P T G Sbjct: 300 IEAGEDFAEVARAVSDDPMAETAGGDLGYIARGDIDPTLEGVLFTMRVGDVSQPVRTGLG 359 Query: 267 VEYIAICDKRDL--GGEIALKAYLSAQNTPTKIE----KHEAEYVKK 307 ++ + + D A++ + A+ ++E + + + Sbjct: 360 LQIVRLTDIEAARREPFEAVRDEVEAEFRSRRVEGLHIELTERLLTE 406 >gi|308183972|ref|YP_003928105.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori SJM180] gi|308059892|gb|ADO01788.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori SJM180] Length = 299 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 81/281 (28%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + ++ +E Sbjct: 40 SSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEA--- 95 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 A + E + + F + + + K Sbjct: 96 -----------KAEKLNQTPEFKAMMEAVKKQALVEFWAKK----------QAEEVKKVQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + + T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295 >gi|291297351|ref|YP_003508749.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Meiothermus ruber DSM 1279] gi|290472310|gb|ADD29729.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Meiothermus ruber DSM 1279] Length = 620 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 37/332 (11%), Positives = 96/332 (28%), Gaps = 32/332 (9%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSS---RIRTTINGEVITDGDISKRIAL 62 ++ + + + + F + ++ + S + T+NG + + D+++ Sbjct: 1 MFGINRRVVAVIFGVLALAFVVGSVLLFTPQGQRSTQGKTEFTVNGRPVYELDLARAQQS 60 Query: 63 LKLQ--KINGELEKIA----VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 + G L+ +A V +IV T Q+ + S + GL Sbjct: 61 DPILSTNPQGLLKNLAEVNFVDRMIVTTALLQDTARVR--VSSGELKKELDTIKERFGLQ 118 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 ++ Q + + I + + K E E+ + ++ Sbjct: 119 KKEDYDRFLTQVGYTDSQLRNELRDQIRINKRVEEIQKKAEPTEEEMRLYFELNRDQYKN 178 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 E ++ + D ++ + + D + K SK++ G Sbjct: 179 EERVQARQIVVDDKTTADKIYAE---------VTAPGADFAAIAKANSKLNAEQGGALGA 229 Query: 237 LLESDLHPQFQNLLKKS----------QNNTTNPYVTQKGVEYIAICDKRDLGG--EIAL 284 ++ + + P + + G + Sbjct: 230 QAGQSEPGPVTRVVFPNAVAEAVFKLRDGQISKPIEAGGRFYIVKVEKYLPAGDVKFEEV 289 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + K + Y+++LR+ A + + Sbjct: 290 KDRVKEDAKRIKGQGALEAYIEELRAKANVKF 321 Score = 65.9 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 20/298 (6%), Positives = 72/298 (24%), Gaps = 53/298 (17%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 ++ + + + I ++++ + +L + + EL V+ Sbjct: 321 FAEGSTYKFENPVVAKVGDTEIKLTEVTQ---SVFANPQVPQLLQQGLGELAVQFFM--- 374 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 T+ + A F K + + Sbjct: 375 ---------PQTLEQLISREAAYQFAQTLGQPFFGSKSDVVAQAQQWKTRD--------- 416 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 E E+ + + + + + Sbjct: 417 ------ITVTEAEVRRYYDANLANFTIPASAKVQAVNFK-------KEDKAKADAFRAAA 463 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN--------LLKKSQNNTTNPY 261 L+ K + + ++ ++ + + P K + Sbjct: 464 LKGGKLEDLAKA-----NNGTVQDYGVVNPGTMPPVPNRLVFLTRGTFPKGPLGEVSEVV 518 Query: 262 VTQKG-VEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G + + + D++ ++ Q ++ + ++++++R A + Sbjct: 519 KLEDGSFQVLIVNDRKAEVLRPFEEVREEARQQVLASRRAEAAQKWLEEVRKAAKVEN 576 >gi|254479750|ref|ZP_05093031.1| PPIC-type PPIASE domain protein [Carboxydibrachium pacificum DSM 12653] gi|214034310|gb|EEB75103.1| PPIC-type PPIASE domain protein [Carboxydibrachium pacificum DSM 12653] Length = 271 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 29/274 (10%), Positives = 81/274 (29%), Gaps = 16/274 (5%) Query: 47 NGEVITDGDISKRIALLKLQKINGELE-KIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 NGE IT+ + + +K Q + K + ++++ + Sbjct: 2 NGEKITNAEYQQIFEQVKEQIESAPTYTKDIWNQDYQGKKFLDFVKENVLDSLVAQKLLV 61 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 +N ++ ++ +K+ ++ + + + D + ++ + E+ Sbjct: 62 QEAKKKNITVTDKEVEEEYNKEKQFNSKVTKEQIREYLLIDKLLAEYTKDVKVTDEELKK 121 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-S 224 + K ++ +K +D + ++ ++++ Sbjct: 122 YYDEHKESFEVMRARHILV------------ADEKTAEDIYQRLMKGEDFAALAKEYSID 169 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 + G + P+F+ + P TQ G I + Sbjct: 170 TATKDNGGDLGEFPHGVMVPEFEEAAFSLKLGEISKPVKTQYGYHIIKSEGI-TVKPFDE 228 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 +K + + K K E +L + I + Sbjct: 229 VKGTIESYLLNDKKNKVIKEKYDELVKASKIQKF 262 >gi|300704055|ref|YP_003745657.1| peptidylprolyl isomerase; exported protein [Ralstonia solanacearum CFBP2957] gi|299071718|emb|CBJ43042.1| Putative Peptidylprolyl isomerase; exported protein [Ralstonia solanacearum CFBP2957] Length = 265 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 64/280 (22%), Gaps = 48/280 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +NG I + I Q EL A L+ L +Q+ K G Sbjct: 27 AAVVNGHAIPSAKVDALIKK-SGQPDTPELRNRARDMLVDRELIEQDAAKRG-------- 77 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + Q Q+ +V +F N Sbjct: 78 --------------------------LLGRDDVQEQLAQARLNVLVAAEFEDYVKNSPTT 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++ + I + + + + Sbjct: 112 EDELHKQYEKIKAQFGNGKEYHAHHILVDKEADAKA------IIAKLKAGGNFEEIAKAQ 165 Query: 223 ASK-IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDL- 278 + + G + P+F L + T P TQ G I + D RD Sbjct: 166 SKDKGSGANGGDLDWANPGTYVPEFSAALTGLKKGEITLTPVKTQFGWHVIRLDDTRDAK 225 Query: 279 -GGEIALKAYLSAQNTPTK--IEKHEAEYVKKLRSNAIIH 315 +K L + +K LR A + Sbjct: 226 IPAFEDVKPQLLEMMMGDQNWQRAKFQAMLKDLREKATVK 265 >gi|260596813|ref|YP_003209384.1| periplasmic folding chaperone [Cronobacter turicensis z3032] gi|260215990|emb|CBA28646.1| Peptidyl-prolyl cis-trans isomerase D [Cronobacter turicensis z3032] Length = 645 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 42/397 (10%), Positives = 99/397 (24%), Gaps = 85/397 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + + +++ F + + +Y S+ +N + I+ + + Sbjct: 21 MMDNLRAAANHVVLKIILGLIILSFILTGVSNYLIGGNSNY-AAKVNDQEISRAQLENAV 79 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + EL + A+Q LI E L Q + V Sbjct: 80 NIERNNLERRMGDRFSELASNEQYMAELRQRALQGLIDEALIDQYARSLHLEISDEQVRQ 139 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML------- 154 + + +++ + G+ + + Q L Q +V Sbjct: 140 SIFKNPAFQSDGKFDNARYNAIITSMGMSADQYAQALRNQLTTDQLVSAVMGSDFILPGE 199 Query: 155 --------------------------KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K E EI Q+ N R + Sbjct: 200 SDQFAALFAQQRQARTATIVVDALAEKQQVSEQEIKDYYQQHANNFQSPEQFRVSYIKLD 259 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 L + ++ + Sbjct: 260 AAALAENASEDEIQAYYDKHQDEFGQPERNRYSLIQTKTEAEAKAILAQLKQGADFATLA 319 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ + I + G +L +F+N K + ++ + G + + D Sbjct: 320 KEKSVDVITARNGGDMGWLEPGTTPDEFKNAGLKDKGQLSDVIKSSVGFLIVRLDDTTPA 379 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + +SA+ K +K+ A Sbjct: 380 KVKPLSEVHDDISAKVKQEKALDAFFALQRKVSDAAN 416 Score = 36.6 bits (82), Expect = 5.1, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 19/52 (36%) Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 Q V +A+ D R A K + + E +K LR +A I Sbjct: 584 QGNVVLLALDDVRSGTMPDAQKKAMGQRLIQNNAEIAFDALLKGLRKDAKIK 635 >gi|168700601|ref|ZP_02732878.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gemmata obscuriglobus UQM 2246] Length = 367 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 30/299 (10%), Positives = 76/299 (25%), Gaps = 33/299 (11%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +NG+ I + + + + Q K + LI L + + T D V Sbjct: 70 AAVVNGKPIPEVAVYRALRQFPEQHR-DMARKEIMAHLIENALIDEYLTALKTTVDEKDV 128 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + + +D++ L+ + + F+ + Q W V+ G Sbjct: 129 EKLIADLKKELTEAKKDYAKELEAMMLTEAEFRSEVTAQMKWEKFVQQQ-----GTDAAL 183 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL---------- 212 + R +L + ++ + + QK + Sbjct: 184 KQLFESSPDVFDGTMVRARHILMTPGTDEAKRKDADQKLRGIKQAVEQEAAKAVAALPAT 243 Query: 213 ---------------PKDCNKLEKFASKIHDVSIGKAQYLLE-SDLHPQF-QNLLKKSQN 255 + +++ G + + F + Sbjct: 244 ADAVAKEQARVSKTDEMFAAYAKGYSTCPSKKDGGDLNFFPRAGAMVEPFAKAAFALKPY 303 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 ++ T+ G I + +R + + + + ++ A I Sbjct: 304 QMSDVVATEFGYHLILVTQRRQGTPKKFEDKGVKEDVQMLYAMRLRESVIAMMKPKAQI 362 >gi|302878839|ref|YP_003847403.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gallionella capsiferriformans ES-2] gi|302581628|gb|ADL55639.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gallionella capsiferriformans ES-2] Length = 631 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 35/404 (8%), Positives = 92/404 (22%), Gaps = 100/404 (24%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M V F++++ +++ F + SY+ + T+NGE IT + + Sbjct: 1 MFDFVHEK-RRFVQIV-LLLIILPFAFFGVDSYRHSGDTDAP-ATVNGEKITKQEFDTAM 57 Query: 61 -------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-- 105 E+++ + L+ + L + + +G+T + Sbjct: 58 RQQQDKMRQVLGENFDPALFEKAEMKRAILDNLVAQRLLLERAKAAGLTVTDEQIAQVIG 117 Query: 106 -FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV----------------- 147 ++S L Q + F+ + + + Sbjct: 118 GIDAFKDGGKFDKARYTSALAAQNMTPAIFEARVKDELTGQQMRDAYTQNGYVSNAVADN 177 Query: 148 ----------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + FM + + I + ++ Sbjct: 178 IIAINEQQRIVSIAPILSRSFMAQAKVDDAAIKTYFDANQKEFQVPEQVKVEYVKFSIAD 237 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA---------------------------- 223 L + ++ + + + + Sbjct: 238 LIAKADIKAEEVRQYYDEHQSEFASAEQRQASHILLVVAATAPQAEQDAVKAKAEKLLAQ 297 Query: 224 -----------------SKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQK 265 V+ G + F + + + + Sbjct: 298 VKQEPGKFADLARQNSQDPGSAVNGGDLGMFGRGMMVKPFDEAVFSLKAGEISGLVKSDF 357 Query: 266 GVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 G I + + ++A ++ + K AE K Sbjct: 358 GYHIIKLTAIKASRATPFNEVQAEIAGKLRQQKAADSFAELADK 401 >gi|119471187|ref|ZP_01613719.1| peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D) [Alteromonadales bacterium TW-7] gi|119445843|gb|EAW27125.1| peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D) [Alteromonadales bacterium TW-7] Length = 633 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 42/398 (10%), Positives = 102/398 (25%), Gaps = 96/398 (24%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + + V++ F + I SY +NG I+ + ++ Sbjct: 1 MLEKIREGSQGPVAKIILGAVILSFALAGIGSYLGQTTEQP-VAEVNGVKISQTEFNRAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + ++ + + L+ + L+ Q + G+ +TV Sbjct: 60 QNERNRLEQQFGEYFTQIAADPNYMAQIRQGVIDRLVQQELQSQLAAELGLRVSDDTVRK 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ + + + + + + F++YL +V Sbjct: 120 TILELPYFQLGDKFNNDRYLQVIRQMNFQPDTFREYLREDMTRSQLVSAVAGTDFALESE 179 Query: 149 --------------------KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS-- 186 K E E+ + + LI Sbjct: 180 LKSAIALQQQTRSIDYLVINKESLADNVEVSEQEVSDYYDLNASQFLSPELISVNYVELK 239 Query: 187 ----------------IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA------- 223 + +KR D K + A Sbjct: 240 AENIVVGSVTEEDVKASYEQNKAQYVEPEKRRVSHILIDNSEDDDAAKAKVDALYAELQQ 299 Query: 224 -------------SKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVE 268 + G ++ + P F++ +++ + + ++ G Sbjct: 300 GADFAELAESSSDDIVSAEMGGDLDWIERDVMDPAFEDAAFSLEAKGDFSEVVASEFGYH 359 Query: 269 YIAICDKRD--LGGEIALKAYLSAQN-TPTKIEKHEAE 303 I + D + + +KA L A+ KI+ + Sbjct: 360 IIKLTDIQPQQVKPFDDVKADLRAELERAEKIDAFYDK 397 >gi|188526979|ref|YP_001909666.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori Shi470] gi|188143219|gb|ACD47636.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori Shi470] Length = 299 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 80/281 (28%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + ++ +E T Sbjct: 40 SSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKT- 97 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + E + + F + + + K Sbjct: 98 -------------EKLNQTPEFKAMMEAVKKQALVEFWAKK----------QAEEVKKIQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + + T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR A I Sbjct: 255 DSPVTYTYDQAKPTIKGMLQEKLFQERMNQRIEELRKRAKI 295 >gi|317008847|gb|ADU79427.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori India7] Length = 299 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 31/281 (11%), Positives = 77/281 (27%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + + Sbjct: 40 SSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIDQAI-------RTALV 91 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 ++ + L + + + + K Sbjct: 92 ENEAKTEKLDSTPEFKAMMEAVKKQALVEFWAKK-----------------QAEEVKKVQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYDANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKTKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + N T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGNYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295 >gi|302344093|ref|YP_003808622.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfarculus baarsii DSM 2075] gi|301640706|gb|ADK86028.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfarculus baarsii DSM 2075] Length = 649 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 45/162 (27%), Gaps = 5/162 (3%) Query: 152 FMLKYGNLEMEI--PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 F K E EI + E R +L + + Q K A + Sbjct: 239 FRDKADVAEDEIIDAYEMDWRQYSRPEEVRARHILIELAPEADEAQKAKAKAQALALLEK 298 Query: 210 LR-LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVE 268 R ++++ G Y + F L+ K T+ G Sbjct: 299 ARAGEDFAKMAKEYSKGPSADKGGDLGYFQRGQMVGPFDELVFKMTPGQIEVVETEFGWH 358 Query: 269 YIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + DK+ + + A+ + + + + L Sbjct: 359 VVKLEDKKKARIVPLEEARGEIKARLAEQQAKDLAMQAAEGL 400 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 31/284 (10%), Positives = 84/284 (29%), Gaps = 20/284 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + ++I + + + F + ++ + + +N + I + +S+ Sbjct: 1 MLELMRRQAGNWIIKIILGLIALAFAL-SFGLSPNFGSNPGVAMKVNDQPIMEDAVSELY 59 Query: 61 ALLKLQKING------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + Q L + A+ L+ L Q ++ G+ + + Sbjct: 60 GRMTEQARQQFGDNFDKLAPMLNLRQQALYSLMDRLLLAQAAQRMGLGVSNRELASSIQD 119 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 A D + +Q + N + S+ D+++ G ++ + Sbjct: 120 MAAFQVEGKFDMRLY--QQRLAANRLTEERFENSVRADLLQGKIAAMVGGS-GQVTPLQV 176 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 L P++ L + + I + ES L + L + Sbjct: 177 DQALQEALSRADAVYLLVKPEDLLDSVKVGEDEIAEHYESHKGLYMNPATLRVDYVALPV 236 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 + + E ++ ++ + + P + I + Sbjct: 237 SAFRDKADVAEDEIIDAYEMDWR----QYSRPEEVRARHILIEL 276 Score = 42.0 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 40/127 (31%), Gaps = 11/127 (8%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL------HPQFQNLLKK 252 +K + A+ + N + A+ + + L S+ Q Q + Sbjct: 494 EKANQLAQVQAKEIIAKLNAAKDPAAALSKLGGKPTGPLTSSEPIEGLPGSEQLQQAIHA 553 Query: 253 SQNNTT---NPYVTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKK 307 + T P G + ++ ++ ++ Q T + ++ Sbjct: 554 LAQDKTVLAQPVPVAGGFAVAVVTKRQPPEPGAMDQMREGMTQQLRRTMQNQTYQRFLAD 613 Query: 308 LRSNAII 314 LR+NA I Sbjct: 614 LRNNADI 620 >gi|260886177|ref|ZP_05736674.2| putative peptidyl-prolyl cis-trans isomerase [Prevotella tannerae ATCC 51259] gi|260850470|gb|EEX70339.1| putative peptidyl-prolyl cis-trans isomerase [Prevotella tannerae ATCC 51259] Length = 487 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 84/305 (27%), Gaps = 38/305 (12%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + L L+ +L+ + I ++ + + + TING I + Sbjct: 1 MLKSPYMKLK-----LSFGLILLSLFAINIEQLQAQSANDPVIMTINGRPILRSEF--EY 53 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + K K +EK +V E L + + +T F + L F Sbjct: 54 SYNKNGKEAAVVEKKSVDEYAEMFLNYKLKVAAAERARIDTTKAFKDEFRTYRDLQLTPF 113 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + D+++ Sbjct: 114 MVDQAFIDSTAIALYDNMKTRLGGKDLLR-----------------------------PA 144 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 + + + + R + + ++++ + + G+ ++ Sbjct: 145 HILFSVKQNATAAEKETAKMRADSVYQVIMNGGNFAALAKEYSGDLGSALRGGEISWIGP 204 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 +F+ K + P +T G I + +++ L L+ + ++ Sbjct: 205 GATVKEFEEAAYKLKVGEVSQPVLTPFGYHIIKMQERKQLEPYAELRDQILYSLKQQGVD 264 Query: 299 KHEAE 303 + A Sbjct: 265 EISAN 269 >gi|121591803|ref|ZP_01678995.1| survival protein SurA [Vibrio cholerae 2740-80] gi|121546332|gb|EAX56604.1| survival protein SurA [Vibrio cholerae 2740-80] Length = 244 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 51/141 (36%), Gaps = 4/141 (2%) Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY 236 R +L ++ + + + ++++ G+ Y Sbjct: 96 VNARHILIKPTIILSDEGAQ-KQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGY 154 Query: 237 LLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTP 294 P+F++ ++ + P+ T G + + D+R++ + ALK Sbjct: 155 QTPDLYVPEFKHQIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKNKAYRILFN 214 Query: 295 TKIEKHEAEYVKKLRSNAIIH 315 K + + ++++LR++A + Sbjct: 215 RKFNEEASAWLQELRASAFVE 235 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 8/125 (6%), Positives = 37/125 (29%), Gaps = 4/125 (3%) Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LK 251 Q++ + ++ + G ++ + ++ F + Sbjct: 2 QDKSTAETLANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKM 61 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 +++ + P+ + G + I D + + ++ + T ++ + + + Sbjct: 62 QNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEGAQKQLNEF 121 Query: 309 RSNAI 313 Sbjct: 122 VQRIK 126 >gi|228906899|ref|ZP_04070766.1| Foldase protein prsA 2 [Bacillus thuringiensis IBL 200] gi|228852647|gb|EEM97434.1| Foldase protein prsA 2 [Bacillus thuringiensis IBL 200] Length = 285 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 28/304 (9%), Positives = 77/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T +T D K++ K Sbjct: 4 KHIFIITALISILMLSACGQKNGSATVATATDSTVTKDDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + + + + F ++ Sbjct: 56 LYEMMAQDVITKKYKVPDEEVNKEVE-----------KVKKQYGDQFKKVLENNRLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSITEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ + ++ + + G Y + P+F+ K + Sbjct: 145 SDENEAKEIKNKLDAGASFEELAKQESQDLLSKDKGGDLGYFNSGTMAPEFETAAYKLNV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+DL +K + + + +++ A Sbjct: 205 GQISNPVKSSNGYHVIKLTDKKDLKPYDEIKNSIRKNLEEERTADPVFSKKLLQEELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|78188012|ref|YP_378350.1| peptidyl-prolyl cis-trans isomerase SurA [Chlorobium chlorochromatii CaD3] gi|78170211|gb|ABB27307.1| peptidyl-prolyl cis-trans isomerase SurA [Chlorobium chlorochromatii CaD3] Length = 438 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 29/273 (10%), Positives = 87/273 (31%), Gaps = 11/273 (4%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI----NGE 71 L + +V + R+ + + I DI++R A+L+ Q Sbjct: 6 LKHIVLAGTLLLVAAPHVLRSEVVDRVVAVVGNDAIFQSDINRRAAMLRAQYPDLAKEQS 65 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + + +Q ++ + L + +T +S V+ ++ R + + G+ Sbjct: 66 VPRNILQGMVEQKLLVTKARLDSVTVESAQVDATTLERLRQIVARFPTKQAMERQLGMTL 125 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLK-----YGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 ++ + + + K E+ + + E + + + Sbjct: 126 PALRESIREELTNQQLADKLRRKKTALASVTYDEVMAFYRDNRGQIAPADEQVSVSQIIK 185 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQ 245 +++ ++ ++ K++ S G ++ + L + Sbjct: 186 YAAVTPESRKEAAAVMQSIQQELQAGADFGELARKYSQDPGSATSGGDLGFVRKGQLVAR 245 Query: 246 FQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277 F+ + + + T+ G+ I + ++ D Sbjct: 246 FEQVAFALKEGEVSEVVETRYGLHLIQMLNRDD 278 >gi|239947926|ref|ZP_04699679.1| ppic-type ppiase domain protein [Rickettsia endosymbiont of Ixodes scapularis] gi|239922202|gb|EER22226.1| ppic-type ppiase domain protein [Rickettsia endosymbiont of Ixodes scapularis] Length = 270 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 34/292 (11%), Positives = 76/292 (26%), Gaps = 38/292 (13%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 ++S ++A ++ T G + + I K + ++ Sbjct: 1 MLSGIAFANKDKVVATYKGGEVKESQIMKEFKPQLNLQSGETIKN--------------- 45 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 ++ N L E+ + + Q +++ Sbjct: 46 -----FDDFPPQDQEKLIKIYVNNLLLKEEVTKSNITSSKEFQEKLKNAKNQLAQQELLA 100 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + + K + + +L QK D + Sbjct: 101 NYIKSNITDKMFDDEYTKYVSNLKGKEQIKVAHIL-----------VKSQKEANDIKTKL 149 Query: 210 LRLPKDCNKLEKFA-SKIHDVSIGKAQYL---LESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 + E+ + K + G Y+ L P+F+ N + P T Sbjct: 150 SKGGNFTKLAEESSLDKASASNGGVIGYILLNQPGQLVPEFEKKAFALKVNEVSTPVKTD 209 Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G I + +K+ + I K + +Y+ L + A + Sbjct: 210 FGWHIIKVLEKKPVP--IPTKEEAKITIDNILAAEVLKKYISDLEAKADLKI 259 >gi|317179430|dbj|BAJ57218.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori F30] Length = 299 Score = 82.8 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 81/281 (28%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + ++ +E T Sbjct: 40 SSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIDQAIRTALVENEAKT- 97 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + E + + F + + + K Sbjct: 98 -------------ERLDSTPEFKAMMEAVKKQALVEFWAKK----------QAEEVKKIQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + + T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMTPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYDQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295 >gi|288803874|ref|ZP_06409299.1| peptidyl-prolyl cis-trans isomerase, PPIC [Prevotella melaninogenica D18] gi|288333639|gb|EFC72089.1| peptidyl-prolyl cis-trans isomerase, PPIC [Prevotella melaninogenica D18] Length = 459 Score = 82.8 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 29/271 (10%), Positives = 74/271 (27%), Gaps = 17/271 (6%) Query: 35 SWAMSSRIRTTINGEVITDGDIS-KRIALLKLQKI-NGELEKIAVQELIVETLKKQEIEK 92 ++ + + E I ++ R+ NG+ E I +++ V+ L + Sbjct: 28 PNSVVDEVIWVVGDEPILKSEVEIMRLQSEAEGTKWNGDPECILPEQIAVQKLFLHQAAL 87 Query: 93 SGITFDSNTVNYFFVQHARNTGL-----SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + + + S E +F +K + Sbjct: 88 DSVEVSESEIARGIDDQINYWISLPQIGSKEKLEAFQNKSMTQIRQDLHDDYKNRLLVQK 147 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 V+ + + E+ +K+ ++ + + + + + Sbjct: 148 VQQNLVNDVAVSPAEVREYFKKLPVDSIPMIPTTVEVEILTQTPKIETEEINRIKNQLRD 207 Query: 208 SRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKKSQN--NTTNP 260 R+ K A G+ Y+ L P F + + Sbjct: 208 YTDRVTKGETSFATLARLYSEDPGSARQGGELGYMGRGVLDPAFAAAAFNLTDPKKISKV 267 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 ++ G I + D+R G+ ++ + Sbjct: 268 VESEFGYHIIQLIDRR---GDKVNVRHILLK 295 >gi|332968862|gb|EGK07909.1| hypothetical protein HMPREF0476_1616 [Kingella kingae ATCC 23330] Length = 318 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 30/317 (9%), Positives = 94/317 (29%), Gaps = 14/317 (4%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-----KI 68 + T +++ + + + +N +IT GD+S+ + LK + Sbjct: 3 NIRTLAAAIMLGLGIQAACAADIKPLNSVLMEVNSSIITYGDVSRTVRELKSRPTNKDIP 62 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 +L + A +L+ +L + + ++ + A + + G Sbjct: 63 EAQLVQAAKMQLVERSLLADAARQQQLRVPEAGIDEELQRRAAQDKTTVAALYAKAASVG 122 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV------REYLIRT 182 ++ +A + ++ N E +I + + Sbjct: 123 YTKESYRLEVAKDLLIAHMLSN-LNSDINITEAQIQEYAVNAQKTGQALPAAEPYTVYTI 181 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + + V RI+ + + + +++ + + G + + L Sbjct: 182 RRILLRATSQADVPAVGNRIQQIATAIAQGTDFASIARRYSQEAQAANGGLHDNITDYML 241 Query: 243 HPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKH 300 + + P + I + R + + +++ Sbjct: 242 PENVEPFLHTLKVGEVSAPRNAGTTWQMIELVGSRTETDPYKMQAEAIRRLLVRQAQQRN 301 Query: 301 EAEYVKKLRSNAIIHYY 317 + ++ +L+ +A++ Y Sbjct: 302 QEAFIGQLQQSAVVREY 318 >gi|152986261|ref|YP_001348850.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa PA7] gi|150961419|gb|ABR83444.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa PA7] Length = 621 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 36/268 (13%), Positives = 86/268 (32%), Gaps = 10/268 (3%) Query: 54 GDISKRIALLKLQKINGELEKIAVQELIV----ETLKKQEIEKSGITFDSNTVNYFFVQH 109 + +++ +LQ +++ + +L +S + T ++ + Sbjct: 137 DQVIRQMNYSRLQFRQMLGQEMLIGQLRAGLAGTGFVTDNELQSFARLERQTRDFATLAV 196 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + S+ + F + + ++ K+ F + + ++ A QK Sbjct: 197 KADASKSSVAEDEVKAFYEGHKSEFMTPEQVVVEYVELKKSSFFDQVKVKQEDLDALYQK 256 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HD 228 + +L N + + +I + + + ++F+ I Sbjct: 257 EIANLSEQRDAAHILI--EVNDKTSDEQARAKIDEIKARLAKGEDFAALAKEFSQDIGSA 314 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALK 285 + G Y P F+ L Q + P T G I + + ++ +LK Sbjct: 315 ATGGDLGYAGRGVYDPAFEEALYALKQGEVSAPVKTPYGYHLIKLLGVQAPEVPSLESLK 374 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 L + +E+ E K L S+A Sbjct: 375 PKLEDELKKQMVEQRFVEATKDLESSAY 402 Score = 67.0 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 32/328 (9%), Positives = 92/328 (28%), Gaps = 27/328 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++++ + + S + +NG+ I+ ++ + + Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIIVLLSLTGFDAIIRATDHSNVAAKVNGDDISLNEVQQAV 60 Query: 61 ALLKLQ-------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + + Q + L++ A++ LI TL Q + F ++ + Sbjct: 61 DMQRRQLLQRLGKDFDPSMLDDKLLKEAALKGLIERTLLLQAAKDDKFAFSDQALDQLIL 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 Q + + + D+ N+ + ++ G + + Sbjct: 121 QTPE-FQVDGKFNADRFDQVIRQMNYSRLQFRQMLGQEMLIGQLRAGLAGTGFVTDNELQ 179 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + + + + V+ + + + + + + Sbjct: 180 SFARLERQTRDFATLAVKADASKSSVAEDEVKAFYEGHKSEFMTPEQVVVEYVELKKSSF 239 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGEIALKA 286 + + + DL +Q N + I + DK A Sbjct: 240 FDQV----KVKQEDLDALYQK-------EIANLSEQRDAAHILIEVNDKTSDEQARAKID 288 Query: 287 YLSAQNTP-TKIEKHEAEYVKKLRSNAI 313 + A+ E+ + + S A Sbjct: 289 EIKARLAKGEDFAALAKEFSQDIGSAAT 316 >gi|255014825|ref|ZP_05286951.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_7] Length = 454 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 25/274 (9%), Positives = 81/274 (29%), Gaps = 12/274 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGEL 72 ++ + + + I + + I DI + + + +++G+ Sbjct: 1 MMKKILSVFFLACCSCLVMAQDNVIDEIVWVVGDDAILRSDIETQRLYNQNEGVRLDGDP 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + +++ ++ L + + IT + N V Q + G + Sbjct: 61 YCVIPEQMAIQKLYLNQAKIDSITVNENQVIQSVDQWMNMAVNQIGSREKLEEYFGKKFS 120 Query: 133 HFKQYLA---IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS--- 186 K + +++ + + E+ ++ ++ + Sbjct: 121 QIKDERKEMVREQQVVQQMQHQLIGEIKLTPSEVRKYFSQLSQDSLPNIPTTVEVQIVTL 180 Query: 187 -IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHP 244 + + E+ + ++ G+ ++ ++ L P Sbjct: 181 EPKIPFEETDAIKARLRDFTEQVNSGKMEFSTLARLYSEDPGSASRGGELGFMSKTQLLP 240 Query: 245 QFQNLLKKSQN--NTTNPYVTQKGVEYIAICDKR 276 +F N+ ++ + T+ G I + +KR Sbjct: 241 EFANVAFNLKDPKRVSQIVQTEYGYHIIQLIEKR 274 >gi|145640428|ref|ZP_01796012.1| stationary-phase survival protein SurA [Haemophilus influenzae R3021] gi|145275014|gb|EDK14876.1| stationary-phase survival protein SurA [Haemophilus influenzae 22.4-21] Length = 162 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 2/160 (1%) Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 ++ K + + +EY +R +L + Q Q ++ + L Sbjct: 1 MLKEAKEKGTAQKVMGKEYEVRHILLKLNPLLNDAQAKKQLAKIRSDIIAGKTTFADAAL 60 Query: 220 EKFASKIHDVSIGKAQY-LLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 + + + G Y E+ Q ++K Q + P+ T+ G + + RD Sbjct: 61 KYSKDYLSGANGGSLGYAFPETYAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRDG 120 Query: 279 GGEIALKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + T+++ ++VK LR A I Y+ Sbjct: 121 DLTAEAYTQKAYERLVNTQLQDATNDWVKALRKRANIQYF 160 >gi|15611231|ref|NP_222882.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori J99] gi|10720360|sp|Q9ZMQ7|Y175_HELPJ RecName: Full=Uncharacterized protein jhp_0161; Flags: Precursor gi|4154677|gb|AAD05744.1| putative PEPTIDYL-PROLYL CIS-TRANS ISOMERASE [Helicobacter pylori J99] Length = 299 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 81/281 (28%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + ++ +E Sbjct: 40 ASAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEA--- 95 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 A + E + + F + + + K Sbjct: 96 -----------KAEKLNQTPEFKAMMEAVKKQALVEFWAKK----------QAEEVKKIQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + + T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295 >gi|332525967|ref|ZP_08402108.1| putative exported isomerase [Rubrivivax benzoatilyticus JA2] gi|332109518|gb|EGJ10441.1| putative exported isomerase [Rubrivivax benzoatilyticus JA2] Length = 270 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 35/279 (12%), Positives = 76/279 (27%), Gaps = 48/279 (17%) Query: 43 RTTINGEVITDGDISKRIALLKL--QKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG+ + + + Q+I EL++ A ++++ + QE EK GI ++ Sbjct: 30 IAVVNGKPVPKSRVETLLQQAARAGQQIGPELQQQARDQVVLREIFVQEAEKKGIATSAD 89 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + + ++ + Sbjct: 90 YKAQ------------------------------MELARQSILIRELFDSYRKTHPVTDA 119 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + EY R +L D + ++ + Sbjct: 120 DAQAEYDKFKAAASGTEYRARHILVETEDEAKKLIAQIK-----------SGGSFEELAK 168 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 K + + G + P+F + + T P +Q G I + D R+ Sbjct: 169 KHSKDPGSGENGGDLDFAKPDAYVPEFSQAMAALKKGEMTQTPVKSQFGWHIIRLDDTRE 228 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + Q + +Y ++LR A Y Sbjct: 229 AQF--PAFDDVKDQIKQRIEQARLQQYQEELRKKARTDY 265 >gi|291278663|ref|YP_003495498.1| peptidyl-prolyl cis-trans isomerase SurA [Deferribacter desulfuricans SSM1] gi|290753365|dbj|BAI79742.1| peptidyl-prolyl cis-trans isomerase SurA [Deferribacter desulfuricans SSM1] Length = 304 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 33/297 (11%), Positives = 94/297 (31%), Gaps = 21/297 (7%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDIS-------KRIALLKLQKINGEL----EKIAVQEL 80 + + ++ + ++IT D+ K+I +K + +L K + L Sbjct: 16 TIAQSKIIDKVVAIVGDKIITQYDVESFNPKQVKKIYSIKDEATREKLLKKYYKEVLDFL 75 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + + + E+ GI + V + ++ E L++ + +K L Sbjct: 76 VNQYVLEIAAEREGIKVSESEVENALNEVLTKNNITIEQLEKVLEENNLTLAKYKYQLKN 135 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + + + K E +I + + + + Sbjct: 136 EILNARIRNALILPKLVVTEEDIKHYIDEHNKELKLDDQFELRIIK---------IKDKN 186 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260 R+ + E+ + + K++ S G ++ + L + + +K + Sbjct: 187 RLDEIEKFLKKGGSFADAAIKYSVDKTAKSGGYIGWIKLNHLPEKIREKVKGYKEGDIVK 246 Query: 261 YVTQKGVEYIAICD-KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + I + K + +K + + +++K ++ I Y Sbjct: 247 IEDNGEITLLFIENFKSKYDIDDKMKDEIVKKIKEKMYPDVVKNWLEKHKATIFIKY 303 >gi|291614259|ref|YP_003524416.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sideroxydans lithotrophicus ES-1] gi|291584371|gb|ADE12029.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sideroxydans lithotrophicus ES-1] Length = 628 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 20/252 (7%), Positives = 60/252 (23%), Gaps = 10/252 (3%) Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ--HARNTGLSAEDFSSFLD 125 L + + + I + I + A + + Sbjct: 152 RQAVLLQQLTESYTQNGYAPESIAEKLIHLNEQQRVVAIADLDAAAFVKQVKLSDGAVSE 211 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 F+ Q + + + + + + E+ ++ + + Sbjct: 212 YYNKNLQEFQLPERAQVQYVVLSSDSLLSQVKVRDEEVKQYYEEHQADFGTQEQRHAAHI 271 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPK----DCNKLEKFASKI-HDVSIGKAQYLLES 240 I K + Q AE+ + + ++++ + G Sbjct: 272 LITVPKQASDAEKQAARTKAEQILKLVKQSPAKFAALAKQYSQDPGSASNGGDLGEFGRG 331 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 + F++ + ++ T G I + + I A + + Sbjct: 332 AMVKPFEDSVFSLKVGQVSDLVQTDFGYHIIKLIAVKPAK--IQALAEVRDMIIQQLKLQ 389 Query: 300 HEAEYVKKLRSN 311 + +L Sbjct: 390 RANDMFAELAEK 401 Score = 45.1 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 41/123 (33%), Gaps = 14/123 (11%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI------- 68 + +++ F + SY++ + ++ T+NGE I + + + + Sbjct: 14 IVLALIILPFAFWGVTSYRNSSGTAP-LATVNGEKIGQQEFDSAMNQQQQRVREMAGANF 72 Query: 69 ------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 E++ + L+ + L E +K G++ V V D Sbjct: 73 DPAFFDKPEIKFSLLDRLVTQHLMAMEAKKVGLSITDEQVGQIIVNIGAFQQDGRFDRQR 132 Query: 123 FLD 125 + Sbjct: 133 YEA 135 >gi|57168199|ref|ZP_00367338.1| probable periplasmic protein Cj1289 [Campylobacter coli RM2228] gi|305431656|ref|ZP_07400825.1| SurA domain protein [Campylobacter coli JV20] gi|57020573|gb|EAL57242.1| probable periplasmic protein Cj1289 [Campylobacter coli RM2228] gi|304445251|gb|EFM37895.1| SurA domain protein [Campylobacter coli JV20] Length = 271 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 88/296 (29%), Gaps = 32/296 (10%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 I+ V +S + I ++ E IT DI + + L + + A+ LI Sbjct: 4 ILLSFVFFISLTHANTINAIAVVVDKEPITTYDIEQTMKTLNI------PKNQALGILIN 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E ++ +I++ GI ++ + +S EDF L +G F+ Sbjct: 58 EKMELSQIKQFGIYTSELELDNAIGKMLAQNKISLEDFKRDLQAKGQNYEQFRSNFKKDF 117 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + A K +N + N Q+ ++ Sbjct: 118 EKRKL-YEKIASTAKTDFSDEGAKKFFEQNKNKFTLFTEINVNIYRSNNAQDLENIKAT- 175 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 K K EK ++ L + + Sbjct: 176 ----------TKTALKAEKATLTPNNSDPRLLGLLSS------------IPIGSFSPVLN 213 Query: 263 TQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +QKG E + DK +K + + + + +Y KLRS I Y Sbjct: 214 SQKGYEIYQVKDKNGGQTPEYYQIKNEILNAYVSEQRQNYIQDYFDKLRSKINIEY 269 >gi|317013595|gb|ADU81031.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori Gambia94/24] Length = 299 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 81/281 (28%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + ++ +E Sbjct: 40 ASAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEA--- 95 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 A + E + + F + + + K Sbjct: 96 -----------KAEKLNQTPEFKAMMEAVKKQALVEFWAKK----------QAEEVKKVQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKTKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + N T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGNYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295 >gi|262383884|ref|ZP_06077020.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_33B] gi|262294782|gb|EEY82714.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_33B] Length = 454 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 27/274 (9%), Positives = 84/274 (30%), Gaps = 12/274 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGEL 72 ++ + + + I + + I DI + + + +++G+ Sbjct: 1 MMKKILSVFFLACCSCIVMAQDNVIDEIVWVVGDDAILRSDIETQRLYNQNEGVRLDGDP 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---NTGLSAEDFSSFLDKQGI 129 + +++ ++ L + + IT + N V Q N S E + K+ Sbjct: 61 YCVIPEQMAIQKLYLNQAKIDSITVNENQVIQSVDQWMNMAVNQIGSREKLEEYFGKKFS 120 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS--- 186 ++ + ++ + + E+ ++ ++ + Sbjct: 121 QIKDERKEAMREQQVVQQMQQQLIGEIKLTPSEVRKYFSQLSQDSLPNIPTTVEVQIVTL 180 Query: 187 -IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHP 244 + + E+ + ++ G+ ++ ++ L P Sbjct: 181 EPKIPFEETDAIKARLRDFTEQVNSGKMEFSTLARLYSEDPGSASRGGELGFMSKTQLLP 240 Query: 245 QFQNLLKKSQN--NTTNPYVTQKGVEYIAICDKR 276 +F N+ ++ + T+ G I + +KR Sbjct: 241 EFANVAFNLKDPKRVSQIVQTEYGYHIIQLIEKR 274 >gi|302345883|ref|YP_003814236.1| PPIC-type PPIASE domain protein [Prevotella melaninogenica ATCC 25845] gi|302149858|gb|ADK96120.1| PPIC-type PPIASE domain protein [Prevotella melaninogenica ATCC 25845] Length = 480 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 29/271 (10%), Positives = 74/271 (27%), Gaps = 17/271 (6%) Query: 35 SWAMSSRIRTTINGEVITDGDIS-KRIALLKLQKI-NGELEKIAVQELIVETLKKQEIEK 92 ++ + + E I ++ R+ NG+ E I +++ V+ L + Sbjct: 49 PNSVVDEVIWVVGDEPILKSEVEIMRLQSEAEGMKWNGDPECILPEQIAVQKLFLHQAAL 108 Query: 93 SGITFDSNTVNYFFVQHARNTGL-----SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + + + S E +F +K + Sbjct: 109 DSVEVSESEIARGIDDQINYWISLPQIGSKEKLEAFQNKSMTQIRQDLHDDYKNRLLVQK 168 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 V+ + + E+ +K+ ++ + + + + + Sbjct: 169 VQQNLVNDVAVSPAEVREYFKKLPVDSIPMIPTTVEVEILTQTPKIETEEINRIKNQLRD 228 Query: 208 SRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKKSQN--NTTNP 260 R+ K A G+ Y+ L P F + + Sbjct: 229 YTDRVTKGETSFATLARLYSEDPGSARQGGELGYMGRGVLDPAFAAAAFNLTDPKKISKV 288 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 ++ G I + D+R G+ ++ + Sbjct: 289 VESEFGYHIIQLIDRR---GDKVNVRHILLK 316 >gi|229171909|ref|ZP_04299476.1| Foldase protein prsA 2 [Bacillus cereus MM3] gi|228611543|gb|EEK68798.1| Foldase protein prsA 2 [Bacillus cereus MM3] Length = 285 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 77/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + +++ SS T I D K++ K Sbjct: 4 KHIFIITALISILMLAACGQKNSSATVATATDSTIKKSDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + S D + F + Sbjct: 56 LYEMMAQDVITKKYKVSDDDVDKEVQ-----------KAKKQYGDQFTAVLENNRLKDEA 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSVTEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKDKGGDLGYFNSGRMAPEFETAAYKLKV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+DL +K + +I + ++K A Sbjct: 205 GQISNPVKSPNGYHIIKLTDKKDLKPYDEVKDSIRKNLEAERIADPTFSHKLIQKELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|197284031|ref|YP_002149903.1| peptidyl-prolyl cis-trans isomerase D [Proteus mirabilis HI4320] gi|194681518|emb|CAR40403.1| peptidyl-prolyl cis-trans isomerase D [Proteus mirabilis HI4320] Length = 625 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 38/398 (9%), Positives = 104/398 (26%), Gaps = 87/398 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + ++ ++ + +++ F + + Y + + +NG I+ + + Sbjct: 1 MMDNIRSTANNPFIKILLAVIILSFVLTGVGGYLFSSGVND-AAEVNGYKISRAQLEQAY 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + Q + + A+ LI + L Q ++ GI+ + Sbjct: 60 QQRRAQLQKDMGDNFASLASSDEGQKMIRQQALNVLINQALLDQFAQELGISAGDQQIRD 119 Query: 105 FFV---QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + + + L I + F + + I + + Sbjct: 120 AIFALPYFQTDGKFDNKKYVELLTANNIDADAFAEGIRQNLINQQLRYSIQGTDFALESE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 F+ K + E+ A + ++ + ++ + Sbjct: 180 VKDFAGLMLQSRNVRLASLDIQPFLEKETVSDEELKAFYDQNTSMFIAPAQVKVSYIQLE 239 Query: 189 DNKLQNQGFV-------------------------------QKRIKDAEESRLRLPKDCN 217 K + + + K+AE++ Sbjct: 240 AQKDLSNITISDDEVKAYYDSNISEFTVPGQKKYSLLVLADETAAKEAEDALKNGADFVT 299 Query: 218 KLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 +++ + G ++ P+ N + + P G + D + Sbjct: 300 LVKEKSIDTFSAKQDGSLGWITIGQELPELANASLTEKGQISQPVKISNGYAIFRLDDIK 359 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + +KA L + K +K+ A Sbjct: 360 PSVVKPFDDIKADLLVKMRENKAIDDFFALQQKVSQAA 397 Score = 36.6 bits (82), Expect = 5.2, Method: Composition-based stats. Identities = 7/49 (14%), Positives = 14/49 (28%) Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 I + D +++ E+ + LR A I + Sbjct: 572 LIQLDSVTDGKPTAEQLEFMTNLYRAQMGEEALQLMLSDLREKAKIEIF 620 >gi|313672046|ref|YP_004050157.1| ppic-type peptidyl-prolyl cis-trans isomerase [Calditerrivibrio nitroreducens DSM 19672] gi|312938802|gb|ADR17994.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Calditerrivibrio nitroreducens DSM 19672] Length = 345 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 33/313 (10%), Positives = 88/313 (28%), Gaps = 20/313 (6%) Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66 ++ + K L + IF + + + I + DI + I Sbjct: 34 YNVKNMKKYLICMLCVFIFGACEKSRDIFTSRNEKPVVVIGKDKYYQKDIIEFIYFELPD 93 Query: 67 KINGELE-KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 L+ K +E+I E +K + + A + Sbjct: 94 IDPSTLKDKDFKKEIINEFIKHKLLLMEAKKAKVTVDKKALKDIASKLTTNNAPKVIDEK 153 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + + + + + +++ + E E+ A ++ + Sbjct: 154 FEKL--------MEEKLLAQKFLEDKIKSEIKISEEELRAYYEEFIKTKQSKVYYHIYQI 205 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 D +A + + + ++++S + G + + P Sbjct: 206 VNEDKHKIE---------EAYKLLKSGKRFEDVAKEYSSGPEAENGGDMGIVDIENFPPV 256 Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAE 303 F + N + ++ G I + + D +K L + K +++ Sbjct: 257 FDLVKNLKPNEISKIVSSEYGYHIIMLKETISSDKPSFEEIKDLLLDELIAEKKDQYLEN 316 Query: 304 YVKKLRSNAIIHY 316 Y+K+ + + Sbjct: 317 YLKEKMKDVKVEI 329 >gi|325268743|ref|ZP_08135371.1| peptidyl-prolyl cis-trans isomerase [Prevotella multiformis DSM 16608] gi|324988911|gb|EGC20866.1| peptidyl-prolyl cis-trans isomerase [Prevotella multiformis DSM 16608] Length = 480 Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 28/268 (10%), Positives = 72/268 (26%), Gaps = 14/268 (5%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETL 85 VP + ++ + + + E I ++ + + + G+ E + +++ V+ L Sbjct: 42 VPAATDRANNVVDEVIWVVGDEPILKSEVEIMKLQGEAEGMKWDGDPECVLPEQIAVQKL 101 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTG--LSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + I + + Q + Q +Q L Sbjct: 102 FLHQAALDSIEVTESEIAQGIDQQINYWISLPQIGSKEKLEEFQHKSMAQIRQDLHDDYK 161 Query: 144 WPDVVKN---DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 +V+ + E+ +K+ ++ + + + + Sbjct: 162 NRQLVQKMQEKLVGDVKVSPAEVREYFRKLPVDSIPMIPTTVEVEILTQTPKVEPEEINR 221 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKKSQN 255 + R+ K A G+ Y+ L P F + Sbjct: 222 IKNQLRDYTDRITKGETSFATLARLYSEDPGSARQGGELGYMGRGMLDPTFAAAAFNLTD 281 Query: 256 --NTTNPYVTQKGVEYIAICDKRDLGGE 281 + ++ G I + D+R Sbjct: 282 PKKVSKVVESEFGYHIIQLIDRRGDKVN 309 >gi|319779226|ref|YP_004130139.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Taylorella equigenitalis MCE9] gi|317109250|gb|ADU91996.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Taylorella equigenitalis MCE9] Length = 258 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 95/305 (31%), Gaps = 56/305 (18%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL-KLQKINGELEK 74 + ++ +P+ + T+NG IT+ + + + K +I E +K Sbjct: 1 MKKILLVASLLALPVYAQN--------VATVNGVNITNQEFEEVTKAIFKDAQITAEQKK 52 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 +++L+ + QE +K I D Sbjct: 53 GILEDLVTREVLIQEAKKQKIDQDPQVAKQI----------------------------- 83 Query: 135 KQYLAIQSIWPDVVKNDFMLK-YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 ++ Q + ++ E++ + Q V++Y +R +L D + Sbjct: 84 -EFSREQILTTALLSKYIEKNPVKEEEIKKLYDSQIKALGDVKQYNVRHILVKDEDRAKE 142 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252 + + ++ ++ + G + S+ PQF + + + Sbjct: 143 LYQQLVDK---------KIDFAETAKKESIDQGTASGGGVLGWHPSSNFVPQFAKAVEEA 193 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 T P + G I + D R A K + + K+ K Y ++L+ Sbjct: 194 KIGVLTEPVKSDFGYHLILVDDIRPTPLPSFEASKREIVNALSLEKVNK----YTEELKK 249 Query: 311 NAIIH 315 A I Sbjct: 250 KAKIK 254 >gi|217033999|ref|ZP_03439421.1| hypothetical protein HP9810_891g3 [Helicobacter pylori 98-10] gi|216943507|gb|EEC22958.1| hypothetical protein HP9810_891g3 [Helicobacter pylori 98-10] Length = 299 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 81/281 (28%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + ++ +E T Sbjct: 40 SSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIDQAIRTALVENEAKT- 97 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + E + + F + + + K Sbjct: 98 -------------ERLDSTPEFKAMMEAVKKQALVEFWAKK----------QAEEVKKIQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + + T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKIPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYDQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295 >gi|149928383|ref|ZP_01916623.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Limnobacter sp. MED105] gi|149822918|gb|EDM82164.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Limnobacter sp. MED105] Length = 633 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 19/189 (10%), Positives = 54/189 (28%), Gaps = 6/189 (3%) Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 F + + + K + +I A ++ K Sbjct: 208 EQVAAFYETNKAQFMAPQKADVEYVVLSPDTIKSKIEVSDADIAAYYEQNKARFSTPEER 267 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP--KDCNKLEKFASKI-HDVSIGKAQYL 237 R + K K + + L+ K ++++ G + Sbjct: 268 RARHILLDAEKEGASADDLKAAAEKVLAELKANPSKFAELAKQYSIDPGSANQGGDLGFF 327 Query: 238 LESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTP 294 + + P+F+ + + + +Q G + + + R ++ +K ++ + Sbjct: 328 GKGAMVPEFEQAVFSQKKGELSGLVKSQFGYHIVEVTEIRGGEVQALEDVKTQIADEIKN 387 Query: 295 TKIEKHEAE 303 K+ A+ Sbjct: 388 QKMTAQFAD 396 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 27/326 (8%), Positives = 87/326 (26%), Gaps = 41/326 (12%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK----RIALLKL 65 ++ + F+ F + + Y + + + + I+ + + RI + Sbjct: 8 QKIMQFVLLLFIAPAFALFGLEGYNTVSADANALAIVGDYPISQEEFDQVKRERIEEARA 67 Query: 66 QKING---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 Q E+ + + L+++ L +Q ++K +T + + Sbjct: 68 QSGENFDPKVFESPEINRQLLDTLVLQYLLQQSVQKQYLTASDKALAEDIARTPLFQVDG 127 Query: 117 AEDFSSFLD--------KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 D ++ N Q + P + + F ++ + Sbjct: 128 KFDLETYKRELAARGLTPTQHEANVRFGLARNQVLDPVLRASFFPETLKTQLDDVQLAGR 187 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 ++ + + + + + +++ + K ++ D Sbjct: 188 VVRVKNIDLAPYLANVSITDEQVAAFYETNKAQFMAPQKADVEYVVLSPDTIKSKIEVSD 247 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 ++++ + P ++ + + +++ LKA Sbjct: 248 ---------------ADIAAYYEQNKARFSTP-EERRARHIL-LDAEKEGASADDLKAAA 290 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAII 314 K +L I Sbjct: 291 EKVLAELKANP---SKFAELAKQYSI 313 >gi|32473571|ref|NP_866565.1| peptidyl-prolyl cis-trans isomerase [Rhodopirellula baltica SH 1] gi|32398251|emb|CAD78346.1| probable peptidyl-prolyl cis-trans isomerase [Rhodopirellula baltica SH 1] Length = 626 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 26/305 (8%), Positives = 80/305 (26%), Gaps = 30/305 (9%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 + + + + A + + +N + I+ + Sbjct: 49 LLLAAAFVAILSGFSTMRVEAAENSVVAVVNADPISRDSL--------ATASVQRYGTDV 100 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + LI L QE ++ G+ + V + A+ GL+ E + L D Q Sbjct: 101 LDNLINRHLIMQECKRRGLGVTTEEVRTEINRVAKKFGLNVESYLQLL--NEERDITPDQ 158 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Y ++ + + E ++ ++ Sbjct: 159 YSREIIWPMLALRKLVADEVAVSQDEFNRAFVSQFGEAIKCRMVMV-------------Q 205 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ--FQNLLKKSQ 254 + + ++ ++F+ S+G + + + + Sbjct: 206 DKSQATQLRAQAVAEPSSFARLAKEFSEDPTSASVGGLIPPIRRYMGDETIEEAAFALKV 265 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIA-----LKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + ++ + +K + + K++ ++ +L+ Sbjct: 266 DEVSELLPVGDHWMFLQAVRRMPASTPSPQAMPAIKDQIEDRIRDEKMKTAASQLFAQLQ 325 Query: 310 SNAII 314 A + Sbjct: 326 EQAQV 330 Score = 66.2 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 28/292 (9%), Positives = 91/292 (31%), Gaps = 18/292 (6%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + + ++ A + ING+ ++ +++ + ++ I L Q Sbjct: 334 LGAPQASAKHPGVAAIINGQQVSISNVAAEC--------IKRHGESVLEGEINRKLLTQA 385 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 + K+G + + + A + G ++ S+ + I V Sbjct: 386 LAKAGKKVTNEDLKAEIERAAISFGYMTDNGSADVQGWFDAVLEGGPGTREVYIEDVVWP 445 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + K +E E ++ ++ Y R + + + ++ +++ + Sbjct: 446 SVALKKL--VEDETVLTQEDLQIGFESHYGPRAEVLACVLSDQRS----AQKVWEMARDN 499 Query: 210 LRLPKDCNKLEKFASKI-HDVSIGKAQYLLE-SDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 +++ + + GK + + + + + + + T Sbjct: 500 PTDQFFGQLANQYSIEPVSSSNFGKVPPIRQHGGQPSVEKEVFQMKPGDLSGIIATGDKY 559 Query: 268 EYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + + A++ L + K+ + +L+ A I + Sbjct: 560 IILRCQGFTEPVVSDFEAVQEELRSVLIEKKMNVAMSLKYDELKQTAEIDNF 611 >gi|53723651|ref|YP_103096.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Burkholderia mallei ATCC 23344] gi|121601461|ref|YP_993254.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Burkholderia mallei SAVP1] gi|124384406|ref|YP_001029302.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Burkholderia mallei NCTC 10229] gi|126440095|ref|YP_001059336.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 668] gi|126450119|ref|YP_001080762.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Burkholderia mallei NCTC 10247] gi|134277391|ref|ZP_01764106.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 305] gi|166998724|ref|ZP_02264578.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia mallei PRL-20] gi|167719141|ref|ZP_02402377.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia pseudomallei DM98] gi|167902279|ref|ZP_02489484.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia pseudomallei NCTC 13177] gi|217421758|ref|ZP_03453262.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 576] gi|237812660|ref|YP_002897111.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei MSHR346] gi|238562190|ref|ZP_00440767.2| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia mallei GB8 horse 4] gi|254177766|ref|ZP_04884421.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia mallei ATCC 10399] gi|254179444|ref|ZP_04886043.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 1655] gi|254200043|ref|ZP_04906409.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia mallei FMH] gi|254206378|ref|ZP_04912730.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia mallei JHU] gi|254358208|ref|ZP_04974481.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia mallei 2002721280] gi|52427074|gb|AAU47667.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia mallei ATCC 23344] gi|121230271|gb|ABM52789.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia mallei SAVP1] gi|124292426|gb|ABN01695.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia mallei NCTC 10229] gi|126219588|gb|ABN83094.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 668] gi|126242989|gb|ABO06082.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia mallei NCTC 10247] gi|134251041|gb|EBA51120.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 305] gi|147749639|gb|EDK56713.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia mallei FMH] gi|147753821|gb|EDK60886.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia mallei JHU] gi|148027335|gb|EDK85356.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia mallei 2002721280] gi|160698805|gb|EDP88775.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia mallei ATCC 10399] gi|184209984|gb|EDU07027.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 1655] gi|217395500|gb|EEC35518.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 576] gi|237503368|gb|ACQ95686.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei MSHR346] gi|238523045|gb|EEP86486.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia mallei GB8 horse 4] gi|243065078|gb|EES47264.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia mallei PRL-20] Length = 259 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 80/278 (28%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I IA L Q +LE+ QEL+ + QE K GI + Sbjct: 25 IAVVNGTPIPKSRADAMIAQLVQQGQQDTPQLEQAVRQELVNREILMQEAIKRGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q+ + DF+ K + Sbjct: 85 VKAQIV-------------------------------VAQQTAVLRALIEDFLKKNQPSD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A + + +++ KD K + + Sbjct: 114 TELKARYDDLVKNAGGREYHLHHILVDN----------EQQAKDLIAKIKGGAKFEDLAK 163 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F ++ + T+ P TQ G I + D R Sbjct: 164 QYSKDPGSAKNGGDLDWSDPKAYVPEFAAAAQQLQKGQMTDTPVKTQFGWHIIRVDDVRS 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + Q +++ + + LR A I Sbjct: 224 ITP--PPFEQVKQQIAQQMVQQKLQAFEESLRQQAKIQ 259 >gi|282878157|ref|ZP_06286954.1| PPIC-type PPIASE domain protein [Prevotella buccalis ATCC 35310] gi|281299735|gb|EFA92107.1| PPIC-type PPIASE domain protein [Prevotella buccalis ATCC 35310] Length = 484 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 84/297 (28%), Gaps = 19/297 (6%) Query: 34 KSWAMSSRIRTTINGEVITDGDIS-----KRIALLKLQKING--ELEKIAVQELIVETLK 86 ++ + + E I D+ +K ++ E+IAVQ+L + + Sbjct: 44 PESSVIDEVIWVVGDEPIMKSDVEMSRLQAEAEGIKFKRNPDFAIPEQIAVQKLFLHQAE 103 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 ++ +N + G S E + + + ++ Sbjct: 104 LDSVKVQESQVTANIERQ-INRWIEMAGGSVERLEQYRGQSIAQMRSQLRDDFRNNLLVQ 162 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 ++ + ++ A + + ++ + I + + + Sbjct: 163 SMQEKLVEDVKVTPSDVRAYFKNLPEDSIPFVPTEVEVEIITRTPRILPEEINRVKDELR 222 Query: 207 ESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKKSQN--NTTN 259 R+ K A G+ Y L P F N+ + + Sbjct: 223 NYTERVTKGETTFATLARLYSEDPGSARQGGEMDYTGRGMLDPAFANVAFNLTDPKKISK 282 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK---HEAEYVKKLRSNAI 313 T+ G I + DKR + + + T ++ K +LR ++ Sbjct: 283 IVETEFGFHIIQLVDKRGDKIK-VRHILIKPKVTDEEVNKTLMRLDSVATQLRKDSF 338 >gi|213582060|ref|ZP_03363886.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 405 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 39/396 (9%), Positives = 102/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S+ +NG+ I+ Sbjct: 1 MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYL-IGGSNNYAAKVNGQEISRAQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 +++ +++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYTQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K + E+ + + K + R + Sbjct: 180 TDELAALVSQQRVVREAVIDVNALAAKQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + + Sbjct: 240 AATMQAPVSDADIQAYYDQHVDQFTQPERIRYSIIQTKTEDDAKAVLDALNKGEDFATLA 299 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ES P+ +N K + + + G + D + Sbjct: 300 KEKSTDIISARNGGDMGWLEESATVPELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|254455883|ref|ZP_05069312.1| PPIC-type PPIASE domain protein [Candidatus Pelagibacter sp. HTCC7211] gi|207082885|gb|EDZ60311.1| PPIC-type PPIASE domain protein [Candidatus Pelagibacter sp. HTCC7211] Length = 309 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 104/313 (33%), Gaps = 21/313 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK------I 68 + + + +I + ++ S + ++I +N E+IT DI + L++ Sbjct: 2 IKISKYTIIFIIYLSLIINHSKSSENKILFKVNNEIITSLDILNEVQYLQIINKEFKNIK 61 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTV---NYFFVQHARNTGLSAEDFSSFLD 125 + +I+ LI E +K+ EI+K N S +F F Sbjct: 62 KEDAFQISKNSLIREKIKEIEIKKIIKDIKIKDQVLNNLILNYFKDLKITSIPEFEKFFL 121 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + I N ++ + ++ +W ++ + + I + +K + Sbjct: 122 NKNINPNMIRKKITLEMLWNQLIYTKYKKNVKINKQLIINDLKKNDKQS--------EFL 173 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH-P 244 N+ + + + ++ GK ++ ES L Sbjct: 174 ISEILFDINENENLNDKSNVINNSIEKNDFSQTALIYSISNTANKGGKLGWVKESILSKK 233 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN---TPTKIEKHE 301 F L K TNP + G + + D R + + L + T ++ + Sbjct: 234 IFNELKKLKIGEHTNPILVPGGFLILKLIDLRQVKKDFDLDKEIKKIVDEKTNQQLNRFS 293 Query: 302 AEYVKKLRSNAII 314 Y K++ + II Sbjct: 294 NIYFNKVKKDTII 306 >gi|150008994|ref|YP_001303737.1| peptidyl-prolyl cis-trans isomerase [Parabacteroides distasonis ATCC 8503] gi|298375774|ref|ZP_06985730.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp. 3_1_19] gi|301312044|ref|ZP_07217966.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp. 20_3] gi|149937418|gb|ABR44115.1| peptidyl-prolyl cis-trans isomerase [Parabacteroides distasonis ATCC 8503] gi|298266811|gb|EFI08468.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp. 3_1_19] gi|300830146|gb|EFK60794.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp. 20_3] Length = 454 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 25/274 (9%), Positives = 81/274 (29%), Gaps = 12/274 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGEL 72 ++ + + + I + + I DI + + + +++G+ Sbjct: 1 MMKKILSVFFLACCSCIVMAQDNVIDEIVWVVGDDAILRSDIETQRLYNQNEGVRLDGDP 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + +++ ++ L + + IT + N V Q + G + Sbjct: 61 YCVIPEQMAIQKLYLNQAKIDSITVNENQVIQSVDQWMNMAVNQIGSREKLEEYFGKKFS 120 Query: 133 HFKQYLA---IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS--- 186 K + +++ + + E+ ++ ++ + Sbjct: 121 QIKDERKEMVREQQVVQQMQHQLIGEIKLTPSEVRKYFSQLSQDSLPNIPTTVEVQIVTL 180 Query: 187 -IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHP 244 + + E+ + ++ G+ ++ ++ L P Sbjct: 181 EPKIPFEETDAIKARLRDFTEQVNSGKMEFSTLARLYSEDPGSASRGGELGFMSKTQLLP 240 Query: 245 QFQNLLKKSQN--NTTNPYVTQKGVEYIAICDKR 276 +F N+ ++ + T+ G I + +KR Sbjct: 241 EFANVAFNLKDPKRVSQIVQTEYGYHIIQLIEKR 274 >gi|167765432|ref|ZP_02437545.1| hypothetical protein BACSTE_03822 [Bacteroides stercoris ATCC 43183] gi|167697060|gb|EDS13639.1| hypothetical protein BACSTE_03822 [Bacteroides stercoris ATCC 43183] Length = 455 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 30/273 (10%), Positives = 82/273 (30%), Gaps = 12/273 (4%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQKINGELE 73 + + + Y + + + E I ++ + AL + +K + + Sbjct: 7 FKFVVLFALTLLAGSTVYGQDNVIDEVVWVVGDEAILKSEVEEARMSALYEGRKFDRDPY 66 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSFLDKQGIG 130 + +E+ V+ L + I + V + + S E + +K Sbjct: 67 CVIPEEIAVQKLFLHQAALDSIEVSESEVIQRVDYMTNMYISNIGSREKMEEYFNKTSSQ 126 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + A + + ++ + + E+ + + ++ + + I Sbjct: 127 IRETLRENAREGLKVQKMQQKLVGEIKVTPAEVRRYFKDLPQDSIPYIPTQVEVQIITQQ 186 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-----HDVSIGKAQYLLESDLHPQ 245 ++ K + R+ K A + G+ ++ L P Sbjct: 187 PKVPLEEIENVKKRLRDFTDRITKGETSFSTLARMYSEDRGSAIRGGEIEFSGRGMLDPA 246 Query: 246 FQN--LLKKSQNNTTNPYVTQKGVEYIAICDKR 276 + N + N + ++ G I + +KR Sbjct: 247 YANVAFNLQDPNKVSKIVESEYGFHIIQLIEKR 279 >gi|309781952|ref|ZP_07676683.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia sp. 5_7_47FAA] gi|308919296|gb|EFP64962.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia sp. 5_7_47FAA] Length = 635 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 45/396 (11%), Positives = 103/396 (26%), Gaps = 102/396 (25%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI------------ 60 + L+ V F + SY S+ SS ++G+VI+ ++ R+ Sbjct: 1 MFLVLLILVFPSFVFFGVQSYSSFMDSSHDAAKVDGKVISTNEVDARVREQTERLRQMLG 60 Query: 61 -ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-------HARN 112 Q ++ + + +I + + E+ ++ +T + + +Q + Sbjct: 61 AQYDPRQFEGPQMRRDVLDGIIQQRVLANEVTRANLTISNEKIRDTILQIPAVAALRKPD 120 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------------------- 149 E + L Q + + L + + + Sbjct: 121 GSFDQEAYVRLLSAQNMTPEQLEGNLRFELSQQQIPQSIVSSAFVPKSLVDRLIQVRDQQ 180 Query: 150 ----------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG--- 196 D+ K + I A + ++ ++ Q Sbjct: 181 REVQALLFKPADYAAKVNADDKAIQAYYDAHQQEFSVPEQVKAEYVVFSGEEMMKQIPVT 240 Query: 197 -FVQKRIKDAEESRLRLPKDCNKL------------------------------------ 219 K D +R + ++ Sbjct: 241 PEQLKEYYDQNAARFKTQEERRAAHILIKLPDNAKPADKEAAKKKAEEVLAEVRKNPASF 300 Query: 220 EKFASKIHDVSI-----GKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 A K G+ +L + P F+N L K + ++ + G I + Sbjct: 301 ADLAKKYSGDPGSAAQGGELGFLGKGATVPPFENALFALKQPGDISDVVQSDFGFHIIKL 360 Query: 273 CDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 + + + A+K L + K +E Sbjct: 361 EEVKGGGVQPLEAVKPELERELRTQLANKKYSELAD 396 >gi|213581625|ref|ZP_03363451.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 139 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 43/126 (34%), Gaps = 3/126 (2%) Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 +Q K + A + + ++++ G + P F++ L K Sbjct: 11 DQQARLKLEEIAADIKSGKTTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTK 70 Query: 253 SQ-NNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + P + G I + D R + + A K K + A ++++ R+ Sbjct: 71 LHKGQISAPVHSSFGWHLIELLDTRKVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRA 130 Query: 311 NAIIHY 316 +A + Sbjct: 131 SAYVKI 136 >gi|299143243|ref|ZP_07036323.1| foldase protein PrsA [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517728|gb|EFI41467.1| foldase protein PrsA [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 331 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 33/297 (11%), Positives = 92/297 (30%), Gaps = 42/297 (14%) Query: 44 TTINGEVITDGDISKRIALLKLQ---------------------KINGELEKIAVQELIV 82 T+NG +T+ D + A + Q ++ +++ ++ +I Sbjct: 2 ATVNGTDLTEKDYVMQYAAQRNQYVLTAGSEDVLSQPSADNPKKTVDQAIKENTLKNMIQ 61 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 L KQ+ KS I D + V+ G ++ ++ Sbjct: 62 MELVKQDAAKSNIAVDQSKVDEEIKAIITQMGG-----EEIYKQKLEALGSTPEFYKSYL 116 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 ++K+ + K E ++ + + + + N+ + Sbjct: 117 TELQLMKSYYETKIKEFEPTDEEIQKYYDKNKDNFFKAKASHILVETVEEANKLKKE--- 173 Query: 203 KDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260 + ++ + + G D+ +F +++K ++P Sbjct: 174 ------LNKGADFAEMAKENSKDPGSAANGGSLGEFKNGDMVAEFNDVVKILKVGEISDP 227 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 ++ G + + +K + + + + +Y++K++ +A I Y Sbjct: 228 VKSKFGYHIVKVDEKSARTLD-----EVKEELKQQLTQAKFTDYIEKMQKDAKISEY 279 >gi|332673018|gb|AEE69835.1| cell binding factor 2 [Helicobacter pylori 83] Length = 299 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 81/281 (28%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + ++ +E T Sbjct: 40 SSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIDQAIRTALVENEAKT- 97 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + E + + F + + + K Sbjct: 98 -------------ERLDSTPEFKAMMEAVKKQALVEFWAKK----------QAEEVKKVQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + + T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYDQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295 >gi|149177450|ref|ZP_01856054.1| probable peptidyl-prolyl cis-trans isomerase [Planctomyces maris DSM 8797] gi|148843783|gb|EDL58142.1| probable peptidyl-prolyl cis-trans isomerase [Planctomyces maris DSM 8797] Length = 407 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 85/301 (28%), Gaps = 25/301 (8%) Query: 40 SRIRTTINGEVITDGDI-----------SKRIALLKLQKINGELEKIAVQELIVETLKKQ 88 S + +NG + DI +R+ + QK+ L K ++ I L Sbjct: 93 STVVAMVNGTPLFVSDIIGVYDFQLKQAEQRMPPEEYQKLRRALVKRDLKSHIERQLLIH 152 Query: 89 EIEKSGITFDSNTVNYFFVQ----------HARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 E++ + + + S ++ L++QG + K+ Sbjct: 153 EMKTTLKKEQLAMLQEHLDKAFDEERIPELQKAVGASSPQELEEKLNQQGRSLYYEKELF 212 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 Q + K E+ A + + R I K + Sbjct: 213 MKQQSALQFMAVKAKSKNDFSREEVLARYKSNLDEYAYPAKARWQRIRISYAKHGGKDKA 272 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL--HPQFQNLLKKSQNN 256 + + EK++ G+ + L L + Sbjct: 273 VGVLDEVIHKLQAGENFGTLAEKYSDGPRAEKKGQWGWTGRGSLADSEVEAALFELPVGQ 332 Query: 257 TTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T+ + T + + + D+++ ++A L K E + +L AII Sbjct: 333 TSQVFETDDSFQIVKVIDRKEAGHTPFADVQAQLEQSMVNDARMKATRETLDQLFKKAII 392 Query: 315 H 315 Sbjct: 393 E 393 >gi|317179979|dbj|BAJ57765.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori F32] Length = 299 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 81/281 (28%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + ++ +E T Sbjct: 40 SSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIDQAIRTALVENEAKT- 97 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + E + + F + + + K Sbjct: 98 -------------ERLDSTPEFKAMMEAVKKQALVEFWAKK----------QAEEVKKVQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + + T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKIPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYDQAKPTIKGMLQEKLFQERMNQKIEELRKHAKI 295 >gi|300114008|ref|YP_003760583.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus watsonii C-113] gi|299539945|gb|ADJ28262.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus watsonii C-113] Length = 640 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 35/401 (8%), Positives = 101/401 (25%), Gaps = 99/401 (24%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I F + I +Y + + ++NGE I+ + Sbjct: 1 MLQAIRSRAQGIFAWVIVGLIAIPFTLWGINNYMLDGGEA-VAASVNGEEISTREFQLAF 59 Query: 61 ALLKLQKI-------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 Q + ++ ++ L+ + L + G+ + ++ Sbjct: 60 QNYTQQLRFLMGASFPEEMLDDPATKQNVIEGLVEQRLVLDAAAELGLGMSDSALSQVIR 119 Query: 108 QHARNTGLSAEDFSSFLD-------------------------------------KQGIG 130 + G S + S + +Q + Sbjct: 120 SNEAFQGESGQFDSQRYEAVLSSQGLTPVAYEARLRSALLSEQLASSLRLSAFATQQEVD 179 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL------ 184 ++ + + V +F ++ ++ Sbjct: 180 TIARLRHQKREVAYSIVPSANFHDAIQVSADKVRQYYDDHPEEFRIPEQVKVHYLRLTAA 239 Query: 185 ---------------------------------FSIPDNKLQNQGFVQKRIKDAEESRLR 211 + Q V+++ ++ E+ L Sbjct: 240 SLATDIPLDEQTLRNFYEESKDQYRVPERRRASHILITIPPQGDEAVRQQAQEKAEAVLE 299 Query: 212 LPKDCNKLEKFASKI-----HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQ 264 + E+ A ++ G + + P F+ + + + P +++ Sbjct: 300 RLQQGEAFEEVAKEVSEDPGSAKKGGDLGFFGRGVMDPAFEKAVFSLEETGVLSEPILSK 359 Query: 265 KGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAE 303 G I + ++ A++ L+ + E+ E Sbjct: 360 FGYHIIKLTGIEPGEVKPFEAVREELAQKYRQQIAEEQFYE 400 Score = 35.8 bits (80), Expect = 7.5, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 18/49 (36%) Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + E + L + E +++++L+S A I Y Sbjct: 588 VYKVQNGDPSKLEEKARRSLVQEMEQVHGEMVYRDFIQELKSKADIKIY 636 >gi|53719054|ref|YP_108040.1| putative exported isomerase [Burkholderia pseudomallei K96243] gi|76809971|ref|YP_333855.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Burkholderia pseudomallei 1710b] gi|126452457|ref|YP_001066604.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 1106a] gi|167738143|ref|ZP_02410917.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 14] gi|167815330|ref|ZP_02447010.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 91] gi|167823737|ref|ZP_02455208.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 9] gi|167845286|ref|ZP_02470794.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei B7210] gi|167910520|ref|ZP_02497611.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 112] gi|226197257|ref|ZP_03792834.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei Pakistan 9] gi|242315812|ref|ZP_04814828.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 1106b] gi|254189167|ref|ZP_04895678.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei Pasteur 52237] gi|254198249|ref|ZP_04904671.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei S13] gi|254259998|ref|ZP_04951052.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 1710a] gi|254297327|ref|ZP_04964780.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 406e] gi|52209468|emb|CAH35420.1| putative exported isomerase [Burkholderia pseudomallei K96243] gi|76579424|gb|ABA48899.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia pseudomallei 1710b] gi|126226099|gb|ABN89639.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 1106a] gi|157807500|gb|EDO84670.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 406e] gi|157936846|gb|EDO92516.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei Pasteur 52237] gi|169654990|gb|EDS87683.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei S13] gi|225930636|gb|EEH26646.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei Pakistan 9] gi|242139051|gb|EES25453.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 1106b] gi|254218687|gb|EET08071.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei 1710a] Length = 259 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 80/278 (28%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I IA L Q +LE+ QEL+ + QE K GI + Sbjct: 25 IAVVNGTPIPKSRADAMIAQLVQQGQQDTPQLEQAVRQELVNREILMQEAIKRGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q+ + DF+ K + Sbjct: 85 VKAQIV-------------------------------VAQQTAVLRALIEDFLKKNQPSD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A + + +++ KD K + + Sbjct: 114 TELKARYDDLVKNAGGREYHLHHILVDN----------EQQAKDLIAKIKGGAKFEDLAK 163 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F ++ + T+ P TQ G I + D R Sbjct: 164 QYSKDPGSAKNGGDLDWSDPKAYVPEFAAAAQQLQKGQMTDAPVKTQFGWHIIRVDDVRS 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + Q +++ + + LR A I Sbjct: 224 ITP--PPFEQVKQQIAQQMVQQKLQAFEESLRQQAKIQ 259 >gi|315637996|ref|ZP_07893181.1| major antigenic peptide PEB4 [Campylobacter upsaliensis JV21] gi|315481844|gb|EFU72463.1| major antigenic peptide PEB4 [Campylobacter upsaliensis JV21] Length = 273 Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 91/298 (30%), Gaps = 33/298 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 +++ S ++++ T++GE I+D ++++ A + + +L + + LI Sbjct: 4 FSLIAAGLIASVSLSLNAATVATVDGEKISDTEVNEFYAPMLRGQDFKKLPEAQQKALIQ 63 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + + I K + + A Sbjct: 64 QYVMQDLILKDAKKQNLEKDPMYIKG---------------------------LERAKDE 96 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + +V +N M ++ +K K V+ ++ + + + + Sbjct: 97 LLLNVYQNKIMQDIKVDAAKVKEAYEKNKEQFVKPARVKAKHILVTSEQEAKNIINELKG 156 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-P 260 +E + + K + G + ES + F + + T P Sbjct: 157 LKDKELEKKFTEIART--KSIDTGSAANGGDLGWFDESTMVKPFTDATFSLKKGEITKTP 214 Query: 261 YVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 T G I D R + K + + + +K A ++L NA + Sbjct: 215 VKTNFGYHIILKQDSRAKEQVAFKDAKMGIENRLKFEEFQKRIALKGQELYKNAKVEI 272 >gi|172060877|ref|YP_001808529.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria MC40-6] gi|171993394|gb|ACB64313.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria MC40-6] Length = 260 Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 83/278 (29%), Gaps = 47/278 (16%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I +A L + Q + +L++ QEL+ + QE + GI + Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIREGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + F+ K + Sbjct: 85 VKAQV-------------------------------AVAQQTVVLRAMIESFLKKNQPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A ++ + + + + + K + + Sbjct: 114 AEVKARYDELVKGAGGNREYHLHHILVDNEQQAKDLIAKIK---------GGAKFEDLAK 164 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F +K + T+ P TQ G I D RD Sbjct: 165 QYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDTPVKTQFGWHIIRADDIRD 224 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + AQ +++ + + LR A I Sbjct: 225 VAP--PPFDQVKAQIAQQIVQQKLQAFEEGLRQQAKIQ 260 >gi|307243271|ref|ZP_07525442.1| PPIC-type PPIASE domain protein [Peptostreptococcus stomatis DSM 17678] gi|306493399|gb|EFM65381.1| PPIC-type PPIASE domain protein [Peptostreptococcus stomatis DSM 17678] Length = 255 Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 31/278 (11%), Positives = 78/278 (28%), Gaps = 46/278 (16%) Query: 43 RTTINGEVITDGDISKRIA----LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98 + +VIT D+ +A + Q N E K + ++I + L + ++ + D Sbjct: 7 LAKVGDKVITQEDLEAAVASLDGYQRQQFDNEEGRKRILADMINQELFYLDAIENKMDQD 66 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 VN + + + + + Sbjct: 67 EIFVNE------------------------------MELVKANMLKQYAINA-CLAAVEI 95 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + E A ++ K+ + + + +L + + + + Sbjct: 96 TDDEKLAYYEEHKDEFKEDESASAKHILVDNEELALEIEK--------KINKKEVSFEDA 147 Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277 +++S + G + P+F+ + ++P TQ G I + D+++ Sbjct: 148 AVEYSSCPSKSNGGSLGTFGRGQMVPEFEEAVFTLPVGKVSSPVKTQFGYHLILVDDRKE 207 Query: 278 LG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 K + K + + L Sbjct: 208 ARQLEYEDCKKDVEQSLAFKKQNEAFLAKLTDLTEKYK 245 >gi|149199507|ref|ZP_01876542.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lentisphaera araneosa HTCC2155] gi|149137442|gb|EDM25860.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lentisphaera araneosa HTCC2155] Length = 308 Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 101/311 (32%), Gaps = 23/311 (7%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-----KRIALLKLQKING------ 70 + ++ + S+ I +NG +IT DI + + L ++ Sbjct: 4 FALITLLCLSSFAGRVYKVSIMAKVNGHIITSYDIQELSYREEMRLRQIFNGPELPSRIV 63 Query: 71 ELEKIAVQELIVETLKKQEI--EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 +L + A+ LI E L + S AR G + F L ++ Sbjct: 64 DLRRRALDILIEEQLILDHFNSNDAYQVPSSLLEERIEKSIARRFGSDRDKFYDMLHQKD 123 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + +++ + I + K +I + K + L + Sbjct: 124 MTVEEYREEIERGIILELMRMEFIRKKIVVTPHDIALYFAENKAEFATPSQMHIKLIILS 183 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 +K + V K ++ ++ + +F G +L +D+ P F Sbjct: 184 KDKSKYDERVTKLKQELKDGKSFDELMPQSDSQF--------NGDLGFLKMTDIRPDFLE 235 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 LK + + ++ + + R + + + ++ + + +++ E++ Sbjct: 236 ALKDKKAGEYITIEETTQMLFVQLSEVRKSAVPPLEDISDQIKSKLSSDQEKQYREEFIG 295 Query: 307 KLRSNAIIHYY 317 L+ A I Y Sbjct: 296 DLKRGAKIEKY 306 >gi|296272150|ref|YP_003654781.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Arcobacter nitrofigilis DSM 7299] gi|296096325|gb|ADG92275.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Arcobacter nitrofigilis DSM 7299] Length = 269 Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 96/298 (32%), Gaps = 42/298 (14%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKINGELEKIAVQEL 80 I+ + + ++ ++NGE +T D+++ R ++ + + E + + +L Sbjct: 5 ILSIVTAFALTATTLSAAETFASVNGEDVTSQDVAQLLRGQNVQFENLPKETKDKVISQL 64 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I + L Q+ KSGI + + + Sbjct: 65 IEKKLLTQKAVKSGIEKEEKYKDAL------------------------------SKIKE 94 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 ++N++ K + E + K K + + K N + Sbjct: 95 DLALELWMQNEY-AKVKATDAEEKSFYDKNKEKFKTPDTLEASHILVKTEKEANDIIAKL 153 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT- 258 ++ + +KF+ G + P+F + L + T Sbjct: 154 -----NIAKNKKGSFEELAKKFSIGPTKTKGGYLGKFQAKQMVPEFSKAALALKKGEYTK 208 Query: 259 NPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P TQ G I + +K + +KA ++ K K E V+KL+ +A I Sbjct: 209 KPVKTQFGYHVIYLENKEVSQILPFDKVKANIAKMIVQEKYGKMIKEEVEKLKKDAKI 266 >gi|229028936|ref|ZP_04185035.1| Foldase protein prsA 2 [Bacillus cereus AH1271] gi|228732216|gb|EEL83099.1| Foldase protein prsA 2 [Bacillus cereus AH1271] Length = 285 Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 79/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + +++ SS T IT GD K++ K Sbjct: 4 KHIFIITALISILMLAACGQKNSSATVATATDSTITKGDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + S D + F + Sbjct: 56 LYEMMAQDVITKKYKVSDDDVDREVQ-----------KAKKQYGDQFTAVLENNRLKDEA 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSVTEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K + Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKDKGGDLGYFHSGTMTPEFETAAYKLNI 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 + + P + G I + K+DL +K + +I + ++K A Sbjct: 205 DQISEPVKSPNGYHIIKLTGKKDLQPYDEVKGSIRKNLEAERIADPTFSHKLLQKELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|307636864|gb|ADN79314.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori 908] gi|325995453|gb|ADZ50858.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori 2018] gi|325997051|gb|ADZ49259.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori 2017] Length = 299 Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 81/281 (28%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + ++ +E Sbjct: 40 ASAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEA--- 95 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 A + E + + F + + + K Sbjct: 96 -----------KAEKLNQTPEFKAMMEAVKKQALVEFWAKK----------QAEEVKKIQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKTKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + N T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGNYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295 >gi|223939125|ref|ZP_03631008.1| hypothetical protein Cflav_PD1553 [bacterium Ellin514] gi|223892174|gb|EEF58652.1| hypothetical protein Cflav_PD1553 [bacterium Ellin514] Length = 329 Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 37/328 (11%), Positives = 95/328 (28%), Gaps = 49/328 (14%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAM--SSRIRTTINGEVITDGDISKRIALL 63 +S ++ + ++P+ + S + +S + + IT D + + Sbjct: 3 MSSQRIIANRCRVAVIISLLAMLPLFAGCSKKVVVNSPVLAKVGSREITTADFEQEVQWR 62 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 + + ++ +QE+I+ L Q+ + +G+ D+ + + Sbjct: 63 IKTQRSLPDKQALLQEMILHELNLQKAKVAGLENDAEVRRTYEDVLVARVKETQLTSR-- 120 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + EI A + R + Sbjct: 121 -----------------------------LEAVKVSADEIRAAYDRDIAKYTRPAKAKLA 151 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-------LEKFASK-IHDVSIGKAQ 235 L I N + + + E++ + F+ G Sbjct: 152 LIYIKANSKLSAEKIAELEGRMHEAQKQAHTLATATPGFGRIAVDFSDDQPSRYQGGDVG 211 Query: 236 YLLESDLHPQF------QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAY 287 + E + ++ K++ ++ T G + D RD + +A Sbjct: 212 WYDEGLVEYRWPKEVVAAGFALKAKGEISDVIKTADGFYLVMKLDLRDQVITPLEQAQAS 271 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + K + E +V+++R+ A + Sbjct: 272 IERRLLSEKRRQLEETFVREMRAFAPVQ 299 >gi|317050625|ref|YP_004111741.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfurispirillum indicum S5] gi|316945709|gb|ADU65185.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfurispirillum indicum S5] Length = 280 Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 30/306 (9%), Positives = 81/306 (26%), Gaps = 50/306 (16%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---- 68 +K +T L + ++ + A S + T+ IT D+++ I L + Sbjct: 1 MKKMTLRLCLAAGLTLGTLAGVALA-SDTVLATVEKRQITQQDLNRAIQSLPDELRAQVR 59 Query: 69 -NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 N E + + EL+ + + E ++ + N Sbjct: 60 SNPEFKAQLLDELVRQEMVYHEAQRQNFQENEVVRNRL---------------------- 97 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + L + + ++ E ++ ++ K V + + Sbjct: 98 --------KLLERELMINAFLEEYLSRNVSVSEQDLKEFYERNKARFVTQATVAASHIL- 148 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD-LHPQ 245 +++ ++ + + G L + Sbjct: 149 --------LEDEQKAREVLRRARAGENFGQLAREHSLDPGSARQEGFIGEFYRGQGLVKE 200 Query: 246 FQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEA 302 F++ T+ G I + +K + ++ K + Sbjct: 201 FEDAAFAAEVGVHPELVRTEFGYHIIKVHEKNPSRTVSLDEARDRVTEIIAEEKQNQALM 260 Query: 303 EYVKKL 308 +++L Sbjct: 261 RLIQEL 266 >gi|108562596|ref|YP_626912.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori HPAG1] gi|107836369|gb|ABF84238.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori HPAG1] Length = 299 Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 30/284 (10%), Positives = 78/284 (27%), Gaps = 29/284 (10%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94 + S+ + T++G IT D I +L++ + LI + + Sbjct: 37 ATDSSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIEQAI-------RT 88 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 ++ + L + + + + Sbjct: 89 ALVENEAKTEKLDSTPEFKAMMEAVKKQALVEFWAKK-----------------QAEEVK 131 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 K E E+ K+ + + + + + + + + Sbjct: 132 KVQIPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIE 191 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAI 272 N+ + + + G ++ + P F + + + T P T+ G I + Sbjct: 192 LANRDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYL 251 Query: 273 CDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K K + ++ + +++LR +A I Sbjct: 252 ISKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295 >gi|309787033|ref|ZP_07681645.1| PPIC-type PPIASE domain protein [Shigella dysenteriae 1617] gi|308924611|gb|EFP70106.1| PPIC-type PPIASE domain protein [Shigella dysenteriae 1617] Length = 611 Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 37/384 (9%), Positives = 98/384 (25%), Gaps = 85/384 (22%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 + + +++ F + + Y ++ +N + I+ G + + Sbjct: 1 MLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAFNSERNRMQQQLG 59 Query: 71 --------------ELEKIAVQELIVETLKKQEIEK-----------------SGITFDS 99 L + + LI E L Q + D Sbjct: 60 DQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQAIFATPAFQVDG 119 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN--------HFKQYLAIQSIWPDVVKND 151 N + G++A+ ++ L Q F + V + Sbjct: 120 KFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGETDELAALVAQQR 179 Query: 152 FMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + E EI + ++ KN + R + +Q Sbjct: 180 VVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLDAATMQQPVSDAD 239 Query: 201 RIKDAEE-----------------------------SRLRLPKDCNKLEKFASKI-HDVS 230 ++ + ++ ++ I + Sbjct: 240 IQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALAKEKSADIISARN 299 Query: 231 IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYL 288 G +L ++ + + +N K + + + G + + D + + ++ + Sbjct: 300 GGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPAKVKSLDEVRDDI 359 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNA 312 +A+ K +K+ A Sbjct: 360 AAKVRHEKALDAYYALQQKVSDAA 383 >gi|34557645|ref|NP_907460.1| cell binding factor 2 precursor major antigen PEB4A [Wolinella succinogenes DSM 1740] gi|34483362|emb|CAE10360.1| CELL BINDING FACTOR 2 PRECURSOR MAJOR ANTIGEN PEB4A [Wolinella succinogenes] Length = 271 Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 99/301 (32%), Gaps = 42/301 (13%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKINGELEKIAVQE 79 +I + I+ ++S++ +++G+ ITD DIS + + + ++ +++K +++ Sbjct: 5 LISSVAAILLLSGLSLSAKTLASVDGDEITDKDISVMLRAMPGVSYDQLPEDMQKKVLEQ 64 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 I L ++ + GI + A Sbjct: 65 AIERKLLAKQAKSEGIQNSKEFKDAL-------------------------------EDA 93 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + +V M E ++ + K V+ L++ + + K + + Sbjct: 94 KEDLTLEVWMRQQMNNAKVSEGDMRKFYDENKEKFVQPELVKAKHILVQNEKEAKEVIAE 153 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT 258 + K + + + G+ + + + P+F N + + + Sbjct: 154 ----IGKAGAKASEKFSELAKSKSIDPAGQNGGELGWFSKDQMVPEFANAAFALQKGSYS 209 Query: 259 N-PYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 P TQ G I DK+ +K + K + KKLR A + Sbjct: 210 KTPVKTQFGYHVIYAEDKKAQAVLPYEDVKPQIEQNLKIQKFRDSVSSTAKKLREKAQVT 269 Query: 316 Y 316 + Sbjct: 270 F 270 >gi|227358098|ref|ZP_03842440.1| peptidyl-prolyl cis-trans isomerase D [Proteus mirabilis ATCC 29906] gi|227161833|gb|EEI46865.1| peptidyl-prolyl cis-trans isomerase D [Proteus mirabilis ATCC 29906] Length = 625 Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 38/398 (9%), Positives = 104/398 (26%), Gaps = 87/398 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + ++ ++ + +++ F + + Y + + +NG I+ + + Sbjct: 1 MMDNIRSTANNPFIKILLAVIILSFVLTGVGGYLFSSGVND-AAEVNGYKISRAQLEQAY 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + Q + + A+ LI + L Q ++ GI+ + Sbjct: 60 QQRRAQLQKDMGDNFASLASSDEGQKMIRQQALNVLINQALLDQFAQELGISAGDQQIRD 119 Query: 105 FFV---QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + + + L I + F + + I + + Sbjct: 120 AIFALPYFQTDGKFDNKKYVELLTANNIDADAFAEGIRQNLINQQLRYSIQGTDFALESE 179 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 F+ K + E+ A + ++ + ++ + Sbjct: 180 VKDFAGLMLQSRNVRLASLDIQPFLEKETVSDEELKAFYDQNTSMFIAPAQVKVSYIQLE 239 Query: 189 DNKLQNQGFV-------------------------------QKRIKDAEESRLRLPKDCN 217 K + + + K+AE++ Sbjct: 240 AQKDLSNITISDDEVKAYYDSNISEFTVPGQKKYSLLVLADETAAKEAEDALKNGADFVT 299 Query: 218 KLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 +++ + G ++ P+ N + + P G + D + Sbjct: 300 LVKEKSIDTFSAKQNGSLGWITIGQELPELANASLTEKGQISQPVKISNGYAIFRLDDMK 359 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + +KA L + K +K+ A Sbjct: 360 PSVVKPFDDIKADLLVKMRENKAIDDFFALQQKVSQAA 397 Score = 36.6 bits (82), Expect = 5.2, Method: Composition-based stats. Identities = 7/49 (14%), Positives = 14/49 (28%) Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 I + D +++ E+ + LR A I + Sbjct: 572 LIQLDSVTDGKPTAEQLEFMTNLYRAQMGEEALQLMLSDLREKAKIEIF 620 >gi|292487473|ref|YP_003530345.1| putative protease maturation protein [Erwinia amylovora CFBP1430] gi|292898715|ref|YP_003538084.1| peptidyl-prolyl cis-trans isomerase D [Erwinia amylovora ATCC 49946] gi|291198563|emb|CBJ45671.1| peptidyl-prolyl cis-trans isomerase D [Erwinia amylovora ATCC 49946] gi|291552892|emb|CBA19937.1| putative protease maturation protein [Erwinia amylovora CFBP1430] Length = 623 Score = 82.4 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 34/396 (8%), Positives = 100/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + +++ F + + Y + +NG+ I+ + Sbjct: 1 MMDNLRAASNHVALKIILGLIILSFVLTGVGGYLTGGSGDY-AAKVNGQEISRAQFERAF 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + ++ ++ + A+ +LI E L Q + G+T + + Sbjct: 60 SSERARQQQMLGEQFSVLAGNDGYMQQMRQQALSQLIDEMLLTQYAKDIGLTISDDQIKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + S ++ G + + + L Q +++ Sbjct: 120 AIFTQPAFQTAGKFDNAKYISIINNMGFTADQYAEALRKQLTTQQLIESVTGTDFVLGNE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K + EI Q+ ++ + R + Sbjct: 180 ADSLAALVAQQRLVREVTINVNALAAKQNVTQEEIANYYQQHQSSLMSSEQFRVSYIKMD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q E+ + Sbjct: 240 AATMQQPVSESDIQSWYEKHQGDYTQPQRNRYSIIQTKTEAEARSVLDVLKKGGDFARLA 299 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ + G +L + + K + + + G + D + Sbjct: 300 KEKSADPISARNGGDMGWLEPETTPDELKRAALKEKGQLSGVITSSVGFIVARLDDTQPE 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + ++ + K + +K+ A Sbjct: 360 KVKALSEVHDDIANKLKQEKAVVAFYKLQQKVSDAA 395 >gi|315924379|ref|ZP_07920601.1| peptidyl-prolyl cis-trans isomerase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622258|gb|EFV02217.1| peptidyl-prolyl cis-trans isomerase [Pseudoramibacter alactolyticus ATCC 23263] Length = 266 Score = 82.4 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 34/289 (11%), Positives = 81/289 (28%), Gaps = 48/289 (16%) Query: 37 AMSSRIRTTINGEVITDGD----ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEK 92 + ++ T+ G+ IT I + ++Q E + + E+I + L + + Sbjct: 13 SEKDQVLATVEGKEITQSQLDLLIEQAPQDQQMQFRTHEGRRQLLNEMIAQELFYLKGK- 71 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 + + + + + + F Sbjct: 72 ------------------------------AEKIEETEEYQKEFAEMTEKFLKSYMISHF 101 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 M E E+ + ++ + +R +P Q+ I EE Sbjct: 102 MSSVKVEEDELRQYYNENQDKFIAPDSVRCSHILVP--------AKQQAIDIIEEIDTGG 153 Query: 213 PKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEY 269 + +++ + G Y + + +F+ T+ P TQ G Sbjct: 154 KTFEQAAKAYSADASNKDRGGDLGYFHKGQMVAEFEMAAFSLNPGEMTSAPVQTQFGWHI 213 Query: 270 IAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I D + ++ A + L K + + L+ ++ Sbjct: 214 IQCTDHKTNEIVPYEAARDSLHRFLLGQKQNRRYVAEAEDLKKQYHVNI 262 >gi|254470940|ref|ZP_05084343.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudovibrio sp. JE062] gi|211960082|gb|EEA95279.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudovibrio sp. JE062] Length = 295 Score = 82.4 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 32/278 (11%), Positives = 83/278 (29%), Gaps = 37/278 (13%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 +NG I++ DI + ++ A ++ E L +Q + I + Sbjct: 36 VVVNGVQISEQDILAEAQNHPAENPGQAVQAAARALVVRELLLQQARALNIIAAPEQHED 95 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + ++++ + + + + + Sbjct: 96 GS-------------------------------ETEEDAAIRELIEQEVDIPSASQDECL 124 Query: 164 PANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL-RLPKDCNKLEK 221 + + + Y +LF+ ++L + + R D + + + + Sbjct: 125 RYYENNKSRFSSEPIYEASHILFAAGPDQLTARSIAKARAHDVIKLLQDKPETFADLAME 184 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGVEYIAICDKRDLG 279 +++ + G L + P+F+ + P T+ G I + K D Sbjct: 185 YSACPSKETGGNLGQLTKGSTVPEFEVALQSMQAGQLSEHPIETKFGYHIIFLNRKIDGN 244 Query: 280 --GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++ + A K ++Y+ L +A I Sbjct: 245 TLPFEHVEETIRAWLEAASWSKAVSQYITILAGSAEIK 282 >gi|167644889|ref|YP_001682552.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caulobacter sp. K31] gi|167347319|gb|ABZ70054.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caulobacter sp. K31] Length = 330 Score = 82.4 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 29/291 (9%), Positives = 73/291 (25%), Gaps = 55/291 (18%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE------KIAVQELIVETLKKQ 88 ++G + D+ + L L+ + + E++ + L Sbjct: 33 PPEPGDTAVARVDGHTVWASDVKREAVAQGLISEGEPLDIGSDLFRQRLDEVVDQKLLAA 92 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 E K + D + + +V Sbjct: 93 EALKQKLDKDPVAQRRL------------------------------AAARERILGDMLV 122 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 +N + +Q+ + E R +L + + + + Sbjct: 123 ENVVEKAVNENAIRGLYAEQQKLSKRSEEIRARQILVASQADGEAVKKLLAA-------- 174 Query: 209 RLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKG 266 + ++ + G Y + + + P+ T+ G Sbjct: 175 ---GASFDALAMERSTDPATRFNGGDLGYFTVDVMPAAYAVALKDAQKGALVGPFQTEGG 231 Query: 267 VEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + DKR + A + + T + + ++KLR A + Sbjct: 232 WAVLRVEDKRLEEPITLEAARPQIVRFLTYDQ----VRDLLEKLRGAAKVE 278 >gi|261839036|gb|ACX98801.1| Protein maturation protease (Peptidylprolyl isomerase) [Helicobacter pylori 52] gi|317181484|dbj|BAJ59268.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori F57] Length = 299 Score = 82.4 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 30/281 (10%), Positives = 77/281 (27%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + + Sbjct: 40 SSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIDQAI-------RTALV 91 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 ++ + L + + + + K Sbjct: 92 ENEAKTEKLDSTPEFKAMMEAVKKQALVEFWAKK-----------------QAEEVKKIQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + + T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYDQAKPTIKGMLQEKLFQERMNQKIEELRKHAKI 295 >gi|218289330|ref|ZP_03493564.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicyclobacillus acidocaldarius LAA1] gi|218240436|gb|EED07617.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicyclobacillus acidocaldarius LAA1] Length = 314 Score = 82.4 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 29/314 (9%), Positives = 79/314 (25%), Gaps = 30/314 (9%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70 +I + + + + IT +++++ Sbjct: 5 RWISGFVGAAAGALVVGGVWFGTYAAHGGGSVVAMVGRTPITRQELAQQSEAYAGS---- 60 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFLDKQGI 129 ++ELI L +Q K IT +N G++++ +S L + + Sbjct: 61 ----AMLEELIANALIEQAAAKQHITATDAEINQQLTAIEMQNGITSDVQLNSLLAQNHM 116 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 F + + + + + +I + ++ ++ + + + Sbjct: 117 TKAQFLDQIRDNILASKLAEAQVH----VTDKQIESYYKQNASMFTVPETRKIAVIEVKT 172 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDL----HP 244 + + + + + G E +L Sbjct: 173 KADAEKALAE---------IQSGTPFASVAKSVSIDAATRSEGGLLGTFSEDELKAGDPA 223 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEA 302 + P Q G E + + A+++ + Sbjct: 224 IASTAFALQAGAVSQPVKVQGGYEIVQCQAITPQHVQPLSAVRSEIIQDIKQQNAASETK 283 Query: 303 EYVKKLRSNAIIHY 316 V +L +A I Sbjct: 284 -LVAQLAKSADIRI 296 >gi|167893828|ref|ZP_02481230.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia pseudomallei 7894] gi|167918548|ref|ZP_02505639.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia pseudomallei BCC215] Length = 259 Score = 82.4 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 80/278 (28%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I IA L Q +LE+ QEL+ + QE K GI + Sbjct: 25 IAVVNGTPIPKSRADAMIAQLVQQGQQDTPQLEQAVRQELVNREILMQEAIKRGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q+ + DF+ K + Sbjct: 85 VKAQIV-------------------------------VAQQTAVLRALIEDFLKKNQPSD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A + + +++ KD K + + Sbjct: 114 TELKARYDDLVKNAGGREYHLHHILVDN----------EQQAKDLIAKIKGGAKFEDLAK 163 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F ++ + T+ P TQ G I + D R Sbjct: 164 QYSKDPGSAKNGGDLDWSDPKAYVPEFAAAAQQLQKGQMTDTPVKTQFGWHIIRVDDVRS 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + Q +++ + + LR A I Sbjct: 224 ITP--PPFEQVKQQIAQQMVQQKLQAFEESLRQQAKIQ 259 >gi|332293065|ref|YP_004431674.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Krokinobacter diaphorus 4H-3-7-5] gi|332171151|gb|AEE20406.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Krokinobacter diaphorus 4H-3-7-5] Length = 483 Score = 82.4 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 31/288 (10%), Positives = 82/288 (28%), Gaps = 22/288 (7%) Query: 40 SRIRTTINGEVITDGDISKRIALLKL--QKINGELEKIAVQELIVETLKKQEIEKSGITF 97 + + +I + DI + + +K Q + L+ L + + I Sbjct: 61 DGVAGVVGDYLILESDIDQSLIEIKQRGQASADITSCQVLGSLLENKLLTHQAVQDSIVV 120 Query: 98 D----SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 ++ V+ + A G + + + + +I D + + Sbjct: 121 QDSRVNSEVDQMVQRFASQLGSEQKVVEFYRKESMADLRAELFSIRKNNILSDRMNQKIV 180 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 EI ++ + + + + I + QK I + R + Sbjct: 181 ESVDVTPDEIKTFFNRIPADELPTFGVELEIARIVIEPKATEEERQKVIDRLKGFRRDIL 240 Query: 214 KDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 ++ + A G ++ L +F+++ + P+ T+ G Sbjct: 241 ENGSSFATKAVLYTDDGASRPDGGLMVIDRKTPLVKEFRDVAFSLQDGEISEPFETEFGF 300 Query: 268 EYIAICDKRDLGGEIALKAYLSAQN----TPTKIEKHEAEYVKKLRSN 311 + + + + + E+ + V K+R Sbjct: 301 HIVTVEKTKGE------RKDIRHILLVPEIKEAQEEEAKDLVNKVRKR 342 >gi|256841005|ref|ZP_05546512.1| peptidyl-prolyl cis-trans isomerase [Parabacteroides sp. D13] gi|256736848|gb|EEU50175.1| peptidyl-prolyl cis-trans isomerase [Parabacteroides sp. D13] Length = 454 Score = 82.0 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 25/274 (9%), Positives = 81/274 (29%), Gaps = 12/274 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGEL 72 ++ + + + I + + I DI + + + +++G+ Sbjct: 1 MMKKILSVFFLACCSCIVMAQDNVIDEIVWVVGDDAILRSDIETQRLYNQNEGVRLDGDP 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + +++ ++ L + + IT + N V Q + G + Sbjct: 61 YCVIPEQMAIQKLYLNQAKIDSITVNENQVIQSVDQWMNMAVNQIGSREKLEEYFGKKFS 120 Query: 133 HFKQYLA---IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS--- 186 K + +++ + + E+ ++ ++ + Sbjct: 121 QIKDERKEMVREQQVVQQMQHQLIGEIKLTPSEVRKYFSQLSQDSLPNIPTTVEVQIVTL 180 Query: 187 -IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHP 244 + + E+ + ++ G+ ++ ++ L P Sbjct: 181 EPKIPFEETDAIKARLRDFTEQVNSGKMEFSTLARLYSEDPGSASRGGELGFMSKTQLLP 240 Query: 245 QFQNLLKKSQN--NTTNPYVTQKGVEYIAICDKR 276 +F N+ ++ + T+ G I + +KR Sbjct: 241 EFANVAFNLKDPKRVSQIVQTEYGYHIIQLIEKR 274 >gi|99080787|ref|YP_612941.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ruegeria sp. TM1040] gi|99037067|gb|ABF63679.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ruegeria sp. TM1040] Length = 424 Score = 82.0 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 96/248 (38%), Gaps = 7/248 (2%) Query: 43 RTTINGEVITDGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 T+N +VIT ++ +R L + + G+ + A +LI + LK+Q ++ G+T Sbjct: 48 AITVNEDVITTYELEQRALFLSVLGSVQGDPFETARDDLIEDRLKRQVMKDVGLTLSEEE 107 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 V + A+ L+ E+F + L++ G+ + + W + V+ F+ + E Sbjct: 108 VTEGMRELAQRANLTLEEFLASLNQAGVAPETVRDFTTAGLGWREYVRGRFLSQARPSEA 167 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 EI + +V+ L +L Q + + R + Sbjct: 168 EIDRAMGTAGSGSVQVLLSEIILPL-----TQENAAQVQDLAIQISELTRAEAFAASAAQ 222 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 F++ G+ ++ S L PQ Q ++ T P Q + + R++ G Sbjct: 223 FSAADSRTDGGRLPWMSLSRLPPQLQEVVLGLEPGEITQPLPMQGAIAIFRMRGLREVDG 282 Query: 281 EIALKAYL 288 A A + Sbjct: 283 RSATYAAI 290 Score = 38.9 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 9/87 (10%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 235 QYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKG--VEYIAICDK--RDLGGEIALKAYLS 289 + L + +N ++ G + ++ +C + + + + ++ Sbjct: 337 GSEAPGAIPQDIALELSRFDENESSATLTRDNGQTLLFVMLCGRTSEVVASQENARVAVA 396 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ + +V++L++NA I + Sbjct: 397 NALVQQRLNELAEAHVEQLKANARIDF 423 >gi|315607432|ref|ZP_07882428.1| peptidyl-prolyl cis-trans isomerase [Prevotella buccae ATCC 33574] gi|315250864|gb|EFU30857.1| peptidyl-prolyl cis-trans isomerase [Prevotella buccae ATCC 33574] Length = 474 Score = 82.0 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 90/302 (29%), Gaps = 40/302 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + T +L+ + ++Y A + + T+NG ++ + G ++K Sbjct: 1 MKTATLLVAMLLCGSMAY---AQNDPVVMTVNGAPVSRSEFEYSYN---KNNSEGVIDKK 54 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 V E + + N L + Sbjct: 55 TVGEYVDLFV--------------------------NYKLKVQAALDARLDTMSSFKKEF 88 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + P +V +I Q+ + +L + N + Q Sbjct: 89 REYRDQQVRPTLVT---DADVEAKARDIYRETQQRVDGGGGLLKTSHILLLLDQNATKTQ 145 Query: 196 GFVQK-RIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK- 252 K RI + + + + + V+ G+ ++ + L ++++ Sbjct: 146 QNAAKVRIDSVYNALKKGADFADLARRLSDDKSSAVNGGQLPWIERNQLVKAYEDVAYAL 205 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + P++++ G + + DK+ ++K + + +L+ A Sbjct: 206 KKGEISKPFLSEYGYHVVKLDDKQPFFPYDSVKTSIYQFIESRGLRDAIVT--DRLQEEA 263 Query: 313 II 314 + Sbjct: 264 KV 265 >gi|303236822|ref|ZP_07323401.1| PPIC-type PPIASE domain protein [Prevotella disiens FB035-09AN] gi|302482990|gb|EFL46006.1| PPIC-type PPIASE domain protein [Prevotella disiens FB035-09AN] Length = 477 Score = 82.0 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 29/259 (11%), Positives = 68/259 (26%), Gaps = 14/259 (5%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--QKINGELEKIAVQELIVETLKKQE 89 S + + ++ + E I D+ + K G ++++ V+ L + Sbjct: 43 SETADNVVDQVLWVVGDEPILKSDLEMMRLQGEADGMKWKGNPNCAILEQIAVQKLFLHQ 102 Query: 90 IEKSGITFDSNTVNYFFVQHARNTG--LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 I + Q + Q +Q L + Sbjct: 103 AALDSINVTEAEITQGVEQQINAWIAIPQIGSKEKLEEYQHKSIAQIRQDLHDDFKNRQL 162 Query: 148 VKN---DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 V+ + E+ +K+ ++ + I +++ Sbjct: 163 VQRMQEKLVGDVKVSPAEVREYFKKLPVDSIPMIPTTVEVQLITQTPRIEPTEIERIKNQ 222 Query: 205 AEESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKKSQN--NT 257 + R+ K E A G+ ++ L P F + Sbjct: 223 LRDYTDRVVKGETSFETLARLYSEDPGSARQGGELGFMGRGMLDPTFAAAAFNLTDPKKV 282 Query: 258 TNPYVTQKGVEYIAICDKR 276 + ++ G I + D+R Sbjct: 283 SKVVESEFGYHIIQLIDRR 301 >gi|312171578|emb|CBX79836.1| putative protease maturation protein [Erwinia amylovora ATCC BAA-2158] Length = 623 Score = 82.0 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 33/396 (8%), Positives = 99/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + +++ F + + Y + +NG+ I+ + Sbjct: 1 MMDNLRAASNHVALKIILGLIILSFVLTGVGGYLTGGSGDY-AAKVNGQEISRAQFERAF 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + ++ ++ + A+ +LI E L Q + G+T + + Sbjct: 60 SSERARQQQMLGEQFSVLAGNDGYMQQMRQQALSQLIDEMLLTQYAKDIGLTISDDQIKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + ++ G + + + L Q +++ Sbjct: 120 AIFTQPAFQTAGKFDNAKYIIIINNMGFTADQYAEALRKQLTTQQLIESVTGTDFVLGNE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K + EI Q+ ++ + R + Sbjct: 180 ADSLAALVAQQRLVREVTINVNALAAKQNVTQEEIANYYQQHQSSLMSSEQFRVSYIKMD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q E+ + Sbjct: 240 AATMQQPVSESDIQSWYEKHQGDYTQPQRNRYSIIQTKTEAEARSVLDVLKKGGDFARLA 299 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ + G +L + + K + + + G + D + Sbjct: 300 KEKSADPISARNGGDMGWLEPETTPDELKRAALKEKGQLSGVITSSVGFIVARLDDTQPE 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + ++ + K + +K+ A Sbjct: 360 KVKALSEVHDDIANKLKQEKAVVAFYKLQQKVSDAA 395 >gi|295111546|emb|CBL28296.1| SurA N-terminal domain. [Synergistetes bacterium SGP1] Length = 368 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 99/336 (29%), Gaps = 26/336 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIV-------PIVSYKSWAMSSRIRTTINGEVITD 53 M + T + + + F+L F + M+ ++G + Sbjct: 1 MLKNLRTHMKWIMITIVVAFLLSTFLMYEGRSGRRGPSRSADGTMTDYEVAAVDGRPLMR 60 Query: 54 GDISKRIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 ++ R+ + + + + ++E + E++K+ I Sbjct: 61 SELENRLRAYLENSGLRNAASLDLPAVYQAVLDQYVLERQLESEVKKADIAISDADAEQA 120 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 +A + + E F + L++QGI +K+ LA Q ++ E E Sbjct: 121 MKAYADSAFPTREAFYAALERQGISSAEYKKSLARQLAVQQLLHMAVGD-VTVSEDEAVK 179 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 +K+ R + + + K + + ++ + Sbjct: 180 FYDSIKDQLFRTPAGVNLQVARFGASADAEALRAKLQAGTDWVQATSGDALASMDVLSVT 239 Query: 226 IHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGE 281 + +L ES L + + G +A+ +R + Sbjct: 240 ------REPLFLPESAFESGVLAELASLDVGAVSPVFSPASGDFSVAVKTERVSESVRPY 293 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + + A + + +Y L + A + Y Sbjct: 294 EDVSSDVRAFLRSQEERRKLNDYEAALMAKAEVVIY 329 >gi|269837477|ref|YP_003319705.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphaerobacter thermophilus DSM 20745] gi|269786740|gb|ACZ38883.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphaerobacter thermophilus DSM 20745] Length = 473 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 18/174 (10%), Positives = 50/174 (28%), Gaps = 12/174 (6%) Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 K + + + G E + + + ++ + A Sbjct: 252 QQYKRNVLDEAGMSEEDFRRLVVLPEAARQKVVYALQEKIPTRAEQVHAAHILVATEDAA 311 Query: 206 EESRLRLPKDCNKLE----KFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260 + +L + + E + A V+ G + + F+ + + P Sbjct: 312 KAIEEQLRQGADFAELAKEQSADSATAVNGGDLGWFPRGLMVEPFEEVAFSLEPGEISAP 371 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 TQ G I + +K + + + ++++++ R+ I Sbjct: 372 VQTQFGWHIITVFEK---EADRPVDVETLQTLRNQQ----FSKWLEEQRAAVTI 418 >gi|149916817|ref|ZP_01905319.1| hypothetical protein PPSIR1_05633 [Plesiocystis pacifica SIR-1] gi|149822534|gb|EDM81923.1| hypothetical protein PPSIR1_05633 [Plesiocystis pacifica SIR-1] Length = 323 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 43/328 (13%), Positives = 91/328 (27%), Gaps = 34/328 (10%) Query: 15 LLTTYFVLIIFCIVPIVS-----YKSWAMSSRIRTTINGEVITDGDISK--------RIA 61 L+T + +V+ + RI ++ E+I + D+++ Sbjct: 2 LITLGLAVGASMSSALVAPELAHAADPQVLDRIVAVVDDEIILESDLARWLMFDEEIAFE 61 Query: 62 LLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDS---NTVNYFFVQHA 110 L KLQ ELE +A+ LI L + + + + A Sbjct: 62 LQKLQNPTEDQLMRRLAELEPLALDNLIGRKLMLSQAQTFQVGATEQEVEVYLQQLARSA 121 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + + ++ + + ++ L I + + + ++ + + Sbjct: 122 QLSSVAELRTAVEQSGRYGTWPEYRNKLREDIILYKLQGQLLNIAVSDAQV---LERYRE 178 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 + L L + V KR K + Sbjct: 179 LSKGEESRLAVRRLVFRAGEDSSERDAVFKRAKTVVRRLSGGEDFEAVAAELGQAAESEE 238 Query: 231 IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYL 288 + P + L K + P + +G + + DL G K L Sbjct: 239 V-----TRSGVSRPIGERLFKAKAGDVVGPLSSGQGYVVFLVEEVIASDLLGFEEAKDRL 293 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +K E ++LR+ A + Sbjct: 294 RRLLEEEARQKALKELYEQLRARAHVDI 321 >gi|330889992|gb|EGH22653.1| periplasmic folding chaperone [Pseudomonas syringae pv. mori str. 301020] Length = 427 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 64/194 (32%), Gaps = 6/194 (3%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 F + + ++ K+ F K + ++ A QK + + Sbjct: 15 KAHYDQHAKEFMSPEQVVLDYIELKKSSFFDKVQVKDEDLQAAYQKEIANLSEQRRAAHI 74 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 L N N + +I++ ++ + ++++ G Y + Sbjct: 75 LI--EVNDKLNDEQAKAKIEEIQQRLAKGEDFAALAKEYSQDPGSSSKGGDLGYAGKGVY 132 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 P F++ L +++ + P T G I + + +LK L+ +E+ Sbjct: 133 DPAFEDTLYALNKDQVSQPVRTDFGWHLIKLLGVEAPSVPTFASLKDKLTTDLKSQLVEQ 192 Query: 300 HEAEYVKKLRSNAI 313 E K+L +A Sbjct: 193 KFVEVTKQLEDSAF 206 Score = 37.0 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 28/254 (11%), Positives = 65/254 (25%), Gaps = 9/254 (3%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 +L +L+ + + + DS + Q A++ GL + + F + G Sbjct: 178 KDKLTTDLKSQLVEQKFVEV----TKQLEDSAFESSDLSQPAQDLGLKVQTTAPFGREGG 233 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 G + + + + + + K + L Sbjct: 234 EGITANRAVIQAAFSPEVLEEGSNSNTLELDPETVVVVRSKEHLQPQQLPLESVASSIRT 293 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246 ++ K +A + LR K ++ + + + L F Sbjct: 294 QLVKEHATAAAKAKGEALLAGLRDGKIPLAAKQDGRDWKSMEAVTRSQEGVDPQVLQTLF 353 Query: 247 QNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAE 303 + + + + + KA ++ A Sbjct: 354 RMPKPDGKGKPEFASITAADGSFVIVRLNGVNQAAAPTDAEKAQYRRFLASRAGQQDFAA 413 Query: 304 YVKKLRSNAIIHYY 317 Y +L S A I + Sbjct: 414 YRAQLESKAKIEKF 427 >gi|229068819|ref|ZP_04202115.1| Foldase protein prsA 2 [Bacillus cereus F65185] gi|229078459|ref|ZP_04211020.1| Foldase protein prsA 2 [Bacillus cereus Rock4-2] gi|229189353|ref|ZP_04316373.1| Foldase protein prsA 2 [Bacillus cereus ATCC 10876] gi|228594147|gb|EEK51946.1| Foldase protein prsA 2 [Bacillus cereus ATCC 10876] gi|228704881|gb|EEL57306.1| Foldase protein prsA 2 [Bacillus cereus Rock4-2] gi|228714327|gb|EEL66206.1| Foldase protein prsA 2 [Bacillus cereus F65185] Length = 285 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 77/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT LK + L ++ Sbjct: 4 KHIFIITALISILMLSACGQKNGSATVATATDSTITK---DNFEKQLKDRYGKDMLYEMM 60 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 Q++I + K VN + + G F ++ Sbjct: 61 AQDVITKKYK----------VSDEEVNKEVEKVKKQYG------DQFKKVLENNGLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSITEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ + ++ + + G Y + P+F+ K + Sbjct: 145 SDENEAKEIKSKLDAGASFEELAKQESQDLLSKDKGGDLGYFNSGTMAPEFETAAYKLNV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+DL +K + + + +++ A Sbjct: 205 GQISNPVKSSNGYHVIKLTDKKDLKPYDEVKNSIRKNLEEERTADPVFSKKLLQEELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|157803578|ref|YP_001492127.1| protein export protein PrsA precursor [Rickettsia canadensis str. McKiel] gi|157784841|gb|ABV73342.1| Protein export protein PrsA precursor [Rickettsia canadensis str. McKiel] Length = 282 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 81/301 (26%), Gaps = 38/301 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + +IF V ++S ++A ++ T G + + I K + ++ L Sbjct: 4 LSVIFLSVSMLSSIAFADKDKVVATYKGGEVKESQIMKEFKPQLNIQSGETIKSFDDFSL 63 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + N L E+ + + Sbjct: 64 QDQEKLIKIYV--------------------NNLLLKEEVAKSHITASKEFQEKLENAKN 103 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +++ N + + NK + + +L QK Sbjct: 104 QLAQQELLANYIKSNITDKMFDDEYNKYVGNLKGKEQIKVAHIL-----------VKSQK 152 Query: 201 RIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL---LESDLHPQFQNLLKK-SQN 255 + + + E+ + K + G + L P+F+ N Sbjct: 153 EANEIKTKLSKGGNFTKLAEELSLDKASASNGGVIGDIILNQPGQLVPEFEKKAFALKVN 212 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T G I + +K+ + I K +Y+ L + A + Sbjct: 213 EVSTPVKTDFGWHIIKVLEKKPVP--IPTKEDAKVTIDNILAAAILKQYISDLEAKADLK 270 Query: 316 Y 316 Sbjct: 271 I 271 >gi|319941578|ref|ZP_08015904.1| hypothetical protein HMPREF9464_01123 [Sutterella wadsworthensis 3_1_45B] gi|319804948|gb|EFW01790.1| hypothetical protein HMPREF9464_01123 [Sutterella wadsworthensis 3_1_45B] Length = 633 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 53/398 (13%), Positives = 106/398 (26%), Gaps = 92/398 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISK 58 M ++ ++ F++ F + I SY S + IT + D++K Sbjct: 1 MLQAFREH-KRWLMVIAMVFIIPSFVVTGIYSYNRMTQSDNSIVKVGEVSITPENFDLAK 59 Query: 59 RIALLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 R L +L++ + + ++ L+ E Q + K+ I+ Sbjct: 60 RQQLERLRQEMGESFHASLLDTPQAREDLLRMLMDEAAINQVVAKNHISVSEAQAVALIK 119 Query: 108 QH---ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN-------------- 150 + SAE + FL QG D F + VV Sbjct: 120 NADALKVDGKFSAERYEQFLRSQGKSDQQFVMEIRNDLAKEAVVSGVSATYPVPKALTEQ 179 Query: 151 -------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 D++ K + EI A + I+ + Sbjct: 180 FYEILTEERSVRTLVLPADDYLDKVAVTDEEIKAYYNAHLKDFLSPEHIKAQYVVFSPDA 239 Query: 192 LQNQGF----------------------------------VQKRIKDAEESRLRLPKDCN 217 NQ + K AEE + D + Sbjct: 240 FSNQKASLDDLKTFYEQNKQRWTVPEERRASHILIEFGDDKEAARKKAEELANEVKADPS 299 Query: 218 KLEKFASKI-----HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIA 271 K + A G + + F++ + + + P T+ G I Sbjct: 300 KFAELAKANSVDTGSAEQGGDLSFFGRGVMTKAFEDAVFNAKKGDIVGPIETEFGWHVIY 359 Query: 272 ICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + D +K+ + + + + + + + Sbjct: 360 VTDIHPAAVEPFEDVKSEIEREYAQQQAIREFSTHADE 397 >gi|317475721|ref|ZP_07934980.1| ppic-type ppiase domain-containing protein [Bacteroides eggerthii 1_2_48FAA] gi|316908104|gb|EFV29799.1| ppic-type ppiase domain-containing protein [Bacteroides eggerthii 1_2_48FAA] Length = 455 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 30/273 (10%), Positives = 80/273 (29%), Gaps = 12/273 (4%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQKINGELE 73 + + + Y + + + E I ++ + AL + +K + + Sbjct: 7 FKFVVLFALTLLAGSTVYGQDNVIDEVVWVVGDEAILKSEVEEARMSALYEGRKFDRDPY 66 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSFLDKQGIG 130 + +E+ V+ L + I V + S E + +K Sbjct: 67 CVIPEEIAVQKLFLHQAALDSIEVSEAEVIQRVDYMTNMYITNIGSREKMEEYFNKTSSQ 126 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + A + + ++ + + E+ + + ++ + + I Sbjct: 127 IRETLRDNAREGLKVQKMQQKLVGEIKITPAEVRRYFKDLPQDSIPYIPTQVEVQIITQQ 186 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-----HDVSIGKAQYLLESDLHPQ 245 ++ K + R+ K A + G+ ++ L P Sbjct: 187 PKVPLEEIENVKKRLRDFTDRITKGETSFSTLARMYSEDRASAIRGGEIEFSGRGMLDPA 246 Query: 246 FQN--LLKKSQNNTTNPYVTQKGVEYIAICDKR 276 + N + N + ++ G I + +KR Sbjct: 247 YANVAFNLQDPNKVSKIVESEYGFHIIQLIEKR 279 >gi|146307082|ref|YP_001187547.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas mendocina ymp] gi|145575283|gb|ABP84815.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas mendocina ymp] Length = 615 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 29/268 (10%), Positives = 82/268 (30%), Gaps = 14/268 (5%) Query: 54 GDISKRIALLKLQKINGELEKIAVQELIV----ETLKKQEIEKSGITFDSNTVNYFFVQH 109 + +++ +LQ E++ + +L + ++ ++ + T ++ V Sbjct: 137 DQVIRQMGYSRLQFRQMLEEEMLIGQLRAGLGASSFVTEQDARAFANLERQTRDFASVTI 196 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + S + F + + ++ K+ F + + ++ + Sbjct: 197 KADPAAVELADSDVQAYYDEHASEFMSPEQVVLEYVELHKDSFFDQIEVSDDDLQPLYES 256 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HD 228 + +L + + +I++ + ++F+ Sbjct: 257 EIANLAEQRQAAHILI------EGDDAAARTKIEEIKARVDAGEDFAALAKEFSEDPGSA 310 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALK 285 G Y P F+ L + P + G I + + ++ +LK Sbjct: 311 ADGGDLGYAGPGVYDPAFEEALYALQTGQVSEPVRSDFGWHLIKLLGVQAPEVPSFDSLK 370 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 L+ ++E+ E K+L A Sbjct: 371 DKLARDFKAQQVEQRFVEATKQLEDAAF 398 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 54/164 (32%), Gaps = 16/164 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I + ++++ + + + +NG+ IT +++ + Sbjct: 1 MLQNIRDNSRGWIAKIIIGLIVMLMAFTGFEAIVTGTSNRNNAAEVNGDTITLNELNTAV 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q + L + +++ LI L Q + F ++ Sbjct: 61 EMQRRQLLQQLGRDFDASLLDDKLLREASLKGLIERKLLLQAAGDADFAFSQAALDQVIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 + + A F + + G F+Q L + + + Sbjct: 121 QTPEFQVDGRFDAARFDQVIRQMGYSRLQFRQMLEEEMLIGQLR 164 >gi|115351951|ref|YP_773790.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria AMMD] gi|115281939|gb|ABI87456.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria AMMD] Length = 260 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 83/278 (29%), Gaps = 47/278 (16%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I +A L + Q + +L++ QEL+ + QE + GI + Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIREGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + F+ K + Sbjct: 85 VKAQV-------------------------------AVAQQTVVLRSMIESFLKKNQPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A ++ +++ KD K + + Sbjct: 114 AEVKARYDELVKGAGGNREYHLHHIL---------VESEQQAKDLIAKIKGGAKFEDLAK 164 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F +K + T+ P TQ G I D RD Sbjct: 165 QYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDTPVKTQFGWHIIRADDIRD 224 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + AQ +++ + + LR A I Sbjct: 225 VAP--PPFDQVKAQIAQQIVQQKLQAFEEGLRQQAKIQ 260 >gi|218128453|ref|ZP_03457257.1| hypothetical protein BACEGG_00021 [Bacteroides eggerthii DSM 20697] gi|217989344|gb|EEC55657.1| hypothetical protein BACEGG_00021 [Bacteroides eggerthii DSM 20697] Length = 455 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 30/273 (10%), Positives = 80/273 (29%), Gaps = 12/273 (4%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQKINGELE 73 + + + Y + + + E I ++ + AL + +K + + Sbjct: 7 FKFVVLFALTLLAGSTVYGQDNVIDEVVWVVGDEAILKSEVEEARMSALYEGRKFDRDPY 66 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSFLDKQGIG 130 + +E+ V+ L + I V + S E + +K Sbjct: 67 CVIPEEIAVQKLFLHQAALDSIEVSEAEVIQRVDYMTNMYITNIGSREKMEEYFNKTSSQ 126 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + A + + ++ + + E+ + + ++ + + I Sbjct: 127 IRETLRDNAREGLKVQKMQQKLVGEIKITPAEVRRYFKDLPQDSIPYIPTQVEVQIITQQ 186 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-----HDVSIGKAQYLLESDLHPQ 245 ++ K + R+ K A + G+ ++ L P Sbjct: 187 PKVPLEEIENVKKRLRDFTDRITKGETSFSTLARMYSEDRASAIRGGEIEFSGRGMLDPA 246 Query: 246 FQN--LLKKSQNNTTNPYVTQKGVEYIAICDKR 276 + N + N + ++ G I + +KR Sbjct: 247 YANVAFNLQDPNKVSKIVESEYGFHIIQLIEKR 279 >gi|30019316|ref|NP_830947.1| peptidylprolyl isomerase [Bacillus cereus ATCC 14579] gi|229126572|ref|ZP_04255586.1| Foldase protein prsA 2 [Bacillus cereus BDRD-Cer4] gi|46396826|sp|Q81GN0|PRSA2_BACCR RecName: Full=Foldase protein prsA 2; Flags: Precursor gi|29894859|gb|AAP08148.1| Peptidyl-prolyl cis-trans isomerase [Bacillus cereus ATCC 14579] gi|228656961|gb|EEL12785.1| Foldase protein prsA 2 [Bacillus cereus BDRD-Cer4] Length = 285 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 27/304 (8%), Positives = 76/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT + K++ K Sbjct: 4 KHIFIITALISILMLSACGQKNGSATVATATDSTITKDNFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + + + + F ++ Sbjct: 56 LYEMMAQDVITKKYKVPDEEVNKEVE-----------KVKKQYGDQFKKVLENYGLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSITEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ + ++ + + G Y + P+F+ K + Sbjct: 145 SDENEAKEIKSKLDAGASFEELAKQESQDLLSKDKGGDLGYFNSGTMAPEFETAAYKLNV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+ L +K + + + +++ A Sbjct: 205 GQISNPVKSSNGYHVIKLTDKKALKPYDEVKDSIRKNLEEERTADPVFSKKLLQEELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|297379400|gb|ADI34287.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori v225d] Length = 299 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 81/281 (28%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + ++ +E T Sbjct: 40 SSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKT- 97 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + E + + F + + + K Sbjct: 98 -------------EKLDQTPEFKAMIEAVKKQALVEFWAKK----------QAEEVKKIQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + + T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295 >gi|297622266|ref|YP_003703700.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Truepera radiovictrix DSM 17093] gi|297163446|gb|ADI13157.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Truepera radiovictrix DSM 17093] Length = 398 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 86/305 (28%), Gaps = 30/305 (9%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKR----IALLKLQK----------INGELEK 74 + S + + + GE ++ GD R + L Q+ G L+ Sbjct: 53 AMTSGAAAEDPDAVVLELGGERVSAGDFEGRFNIALRNLAAQQGIPLDPVTLAQFGTLKP 112 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 +++ E QE E G+ V Q G E++ + L + G D Sbjct: 113 AFLEQFATERALLQEAEARGLAPADEAVEAELEQARAAAG---ENYEALLAQGGFEDEAA 169 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + L +S+ + + + + + A + + R + + D Sbjct: 170 LRELIYESLALQGLVDALEAEVEVGDEAVSAYYEANQAQFERSEEVCARHILVEDEATAE 229 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK-K 252 + ++ G L P+F+ Sbjct: 230 ALLTR---------LEAGEDFGELARDNSTDPGSAPEGGDLGCLPRGVTVPEFEEAAFAT 280 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 TT P + G I + ++ E A + +Q + E + L + Sbjct: 281 EVGETTGPVRSDFGYHLIRVYERNPA--ETAPLEEVRSQIEGQLRNEGLNERIASLVEAS 338 Query: 313 IIHYY 317 + Y Sbjct: 339 GVQTY 343 >gi|288800858|ref|ZP_06406315.1| peptidyl-prolyl cis-trans isomerase, PPIC [Prevotella sp. oral taxon 299 str. F0039] gi|288332319|gb|EFC70800.1| peptidyl-prolyl cis-trans isomerase, PPIC [Prevotella sp. oral taxon 299 str. F0039] Length = 463 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 84/294 (28%), Gaps = 16/294 (5%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQKINGELEKIAVQELIVETLKKQE 89 S ++ + + E I D+ + L+ K+NG+ + I ++L V+ L + Sbjct: 31 SVNPQSVIDEVIWVVGDEPILKSDVEAMRLQSELEGVKLNGDPDCIIPEQLAVQKLFLHQ 90 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 I + ++ + + +Q + +++ Sbjct: 91 AAIDSINISESEISSEIEHQINYWIQQIGSKEKLEEYRRQSITQIRQQMHDDFKNRLLIQ 150 Query: 150 ---NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 + ++ + + ++ + I +Q + K + Sbjct: 151 EMKKKLVKDIAVTPGDVRRYFESLPADSIPTIPTAVEVEIITMLPRVSQEEIAKVKNELR 210 Query: 207 ESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKKSQN--NTTN 259 E R+ K A G+ Y P F + + + Sbjct: 211 EYTERVTKGETSFATLARLYSEDPGSARQGGEMDYTGRGMFDPAFAAVAFNLTDPKKISK 270 Query: 260 PYVTQKGVEYIAICDKRDLGGE---IALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 T+ G I + DKR + I K +SA+ + + LR Sbjct: 271 IVETEFGYHIIQLIDKRGDKVKVRHILRKPVVSAEIV-EATKVKMDSLLADLRD 323 >gi|327541670|gb|EGF28194.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopirellula baltica WH47] Length = 599 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 26/305 (8%), Positives = 80/305 (26%), Gaps = 30/305 (9%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 + + + + A + + +N + I+ + Sbjct: 22 LLLAAAFVAILSGFSTMRVEAAENSVVAVVNADPISRDSL--------ATASVQRYGTDV 73 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + LI L QE ++ G+ + V + A+ GL+ E + L D Q Sbjct: 74 LDNLINRHLIMQECKRRGLGVTTEEVRTEINRVAKKFGLNVESYLQLL--NEERDITPDQ 131 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Y ++ + + E ++ ++ Sbjct: 132 YSREIIWPMLALRKLVADEVAVSQDEFNRAIVSQFGEAIKCRMVMV-------------Q 178 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ--FQNLLKKSQ 254 + + ++ ++F+ S+G + + + + Sbjct: 179 DKSQATQLRAQAVAEPSSFARLAKEFSEDPTSASVGGLIPPIRRYMGDETIEEAAFALKV 238 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIA-----LKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + ++ + +K + + K++ ++ +L+ Sbjct: 239 DEVSELLPVGDHWMFLQAVRRMPASTPSPQAMPAIKDQIEDRIRDEKMKTAASQLFAQLQ 298 Query: 310 SNAII 314 A + Sbjct: 299 EQAQV 303 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 28/288 (9%), Positives = 83/288 (28%), Gaps = 18/288 (6%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 ++ A + ING+ ++ +++ + ++ I L Q + K+ Sbjct: 311 QASAKHPGVAAIINGQQVSISNVAAEC--------IKRHGESVLEGEINRKLLTQALAKA 362 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 G + + + A + G ++ S+ + + DVV Sbjct: 363 GKKVTNEDLKAEIERAAISFGYMTDNGSADVQGWFDAVLEGGPGTR-EVYIEDVVWPSVA 421 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 LK + + + VL + ++ +++ + Sbjct: 422 LKKLVEDKTVLTQEDLQIGFESHYGPRAEVLACVLSDQRS-----AQKVWEMARDNPTDQ 476 Query: 214 KDCNKLEKFASKI-HDVSIGKAQYLLE-SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIA 271 +++ + + GK + + + + + + T + Sbjct: 477 FFGQLANQYSIEPVSSSNFGKVPPIKRHGGQPSVEKEVFQMKPGDLSGIIATGDKYIILR 536 Query: 272 ICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + A++ L + K+ + +L+ A I + Sbjct: 537 CQGFTEPVVSDFEAVQEELRSVLIEKKMNVAMSLKYDELKQTAEIDNF 584 >gi|325108901|ref|YP_004269969.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces brasiliensis DSM 5305] gi|324969169|gb|ADY59947.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces brasiliensis DSM 5305] Length = 365 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 31/290 (10%), Positives = 78/290 (26%), Gaps = 27/290 (9%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91 + S +NG+ IT DI R + + ++ +I T+ E E Sbjct: 52 ASLGQPQQSPALARVNGQTIT-YDIVARECF-------ERIGEEVLENMINRTVIHVETE 103 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 + G+ +N + A L + + Q QY ++ Sbjct: 104 RRGVQVTEADINNEVTKIAGKFNLPVDT--WYQMLQTERGLSPMQYRRDVIWPMIALRKL 161 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + ++ + R ++ + + + ++ Sbjct: 162 AGEEVQISQADMQRAF---QRDYGPRVRCRMIMMDNVRRANEVWEKANRTPDEFDKL--- 215 Query: 212 LPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269 +++ + + S G + + ++ + + + Sbjct: 216 -------AREYSVESNSRSLGGSIPPISRYSGNQNLEDAAFRLQPGEVSGLIQVENHYVI 268 Query: 270 IAICDKRDLGGEIALK--AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + L AQ K ++ A + L+ N I Y Sbjct: 269 LKCEGHTEQVVTDIKDVWDELHAQLVEEKTQERVALVFENLKKNTRIDNY 318 >gi|109946965|ref|YP_664193.1| peptidyl-prolyl cis-trans isomerase [Helicobacter acinonychis str. Sheeba] gi|109714186|emb|CAJ99194.1| peptidyl-prolyl cis-trans isomerase [Helicobacter acinonychis str. Sheeba] Length = 298 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 81/281 (28%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G+ IT D I +L++ + L+ + ++ +E T Sbjct: 37 ASAGVLATVDGKPITKSDFD-AIKQRNPNFDFDKLKEEEKKALVEQAIRTVLVENEAKT- 94 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + E + + F + + + K Sbjct: 95 -------------EKLDSTPEFKAMIDAVKKQALVEFWAKK----------QAEQVKKVK 131 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K + + + + + + + + N Sbjct: 132 IPEKEMQDFYNANKEQIFVKQEAHARHILVKSEDEAKRIISEIDKQPKTKREAKFIELAN 191 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + N T P T+ G I + K Sbjct: 192 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGNYTKTPIKTEFGYHIIYLISK 251 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + K + ++ + +++LR A I Sbjct: 252 DNPVTYTYEQAKPTIKGMLQEKLFQERMNQKIEQLRKQAKI 292 >gi|283956683|ref|ZP_06374162.1| hypothetical protein C1336_000260133 [Campylobacter jejuni subsp. jejuni 1336] gi|283791932|gb|EFC30722.1| hypothetical protein C1336_000260133 [Campylobacter jejuni subsp. jejuni 1336] Length = 271 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 80/296 (27%), Gaps = 32/296 (10%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 I+ S S + I ++ E IT DI + + +LK+ A+ LI Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKVLKID------RNQALGVLIN 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E ++ ++++ GI + ++ + + F + L + F+ L Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRANLKKDL 117 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + + + + Y + +N + + Sbjct: 118 EKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANIYLSNNPQTLENIKNTKK 177 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 + L + L + + Sbjct: 178 TILKPQNASLN------------------------TSNADPRLLGLLSQIPVGGFSPVLN 213 Query: 263 TQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G E + K +K + + + +Y KLRS I Y Sbjct: 214 GKNGYELYEVKSKDGAQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 269 >gi|210134373|ref|YP_002300812.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori P12] gi|210132341|gb|ACJ07332.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori P12] Length = 299 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 30/281 (10%), Positives = 77/281 (27%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + + Sbjct: 40 SSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIEQAI-------RTALV 91 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 ++ + L + + + + K Sbjct: 92 ENEAKTEKLDSTPEFKAMMEAVKKQALVEFWAKK-----------------QAEEVKKVQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + + T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295 >gi|332098560|gb|EGJ03526.1| PPIC-type PPIASE domain protein [Shigella boydii 3594-74] Length = 611 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 37/384 (9%), Positives = 98/384 (25%), Gaps = 85/384 (22%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 + + +++ F + + Y ++ +N + I+ G + + Sbjct: 1 MLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAFNSERNRMQQQLG 59 Query: 71 --------------ELEKIAVQELIVETLKKQEIEK-----------------SGITFDS 99 L + + LI E L Q + D Sbjct: 60 DQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQAIFATPAFQVDG 119 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN--------HFKQYLAIQSIWPDVVKND 151 N + G++A+ ++ L Q F + V + Sbjct: 120 KFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGETDELAALVAQQR 179 Query: 152 FMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + E EI + ++ KN + R + +Q Sbjct: 180 VVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLDAATMQQPVSDAD 239 Query: 201 RIKDAEE-----------------------------SRLRLPKDCNKLEKFASKI-HDVS 230 ++ + ++ ++ I + Sbjct: 240 IQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALAKEKSADIISARN 299 Query: 231 IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYL 288 G +L ++ + + +N K + + + G + + D + + ++ + Sbjct: 300 GGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPAKVKSLDEVRDDI 359 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNA 312 +A+ K +K+ A Sbjct: 360 AAKVKHEKALDAYYALQQKVSDAA 383 >gi|226227335|ref|YP_002761441.1| peptidyl-prolyl cis-trans isomerase [Gemmatimonas aurantiaca T-27] gi|226090526|dbj|BAH38971.1| peptidyl-prolyl cis-trans isomerase [Gemmatimonas aurantiaca T-27] Length = 610 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 40/345 (11%), Positives = 86/345 (24%), Gaps = 64/345 (18%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCI-VPIVSYKSWAMSSRIRTTINGEVITDGDISKR 59 M + ++ + FV ++ ++ ++ T+NGE I Sbjct: 1 MLQSMRSAAKYIWIFIIVAFVGSFLLYETSGLAGRAPVTTTTSIATVNGEEILLTTWQNA 60 Query: 60 IALLKL-----------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV- 107 + L+ +LE A E++ E L +QE ++ GIT V Sbjct: 61 VNSLEQQQQQQSGRGVTLDERQQLEDRAFDEIVTEILLQQEYKRRGITVTDEEVVQAARV 120 Query: 108 --------------QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF- 152 + SS + +Q + + + + Sbjct: 121 SPPPQATSSPDLQTDGKFDMQKYLRLLSSPMARQSGMLAGLEAFYRNEIPKQKLFDQVAS 180 Query: 153 ---------------------------------MLKYGNLEMEIPANKQKMKNITV-REY 178 + EI + K Sbjct: 181 GAYVSDERLWQVYRDRHDSAAVSFVVLRTDALTDTSVTVTDAEISQFYDRNKKRYERPGR 240 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL 237 I ++L + RI + K + ++ + + G Sbjct: 241 AIVSLLTVPRTVTAADSAAAHTRIDQIRAEIVGGAKFEDVAKRESTDSLSGAQGGALGKG 300 Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + P+F+ + P +T G I + D++ + Sbjct: 301 GRNRFTPKFEEAAYALKVGELSQPVLTPFGWHIIRVDDRKGDTLD 345 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 2/77 (2%) Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKI 297 P+ Q G+ + I + D A KA Q + Sbjct: 517 GQFTQAIGGAFMVPVGQVGGPFRAQDGMVVLRIDSRNDAKRDAFEAEKASQRGQLLQSLR 576 Query: 298 EKHEAEYVKKLRSNAII 314 ++ EY+ LR N I Sbjct: 577 QQRIDEYLSNLRENTKI 593 >gi|228984336|ref|ZP_04144517.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229154831|ref|ZP_04282946.1| Foldase protein prsA 2 [Bacillus cereus ATCC 4342] gi|228628779|gb|EEK85491.1| Foldase protein prsA 2 [Bacillus cereus ATCC 4342] gi|228775453|gb|EEM23838.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 285 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 81/304 (26%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + +++ SS T IT D K+ LK + L ++ Sbjct: 4 KHIFIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQ---LKDRYGKDMLYEMM 60 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 Q++I + K E + + + ++ ++ Sbjct: 61 AQDVITKKYKVSEDDVDKEVQKAKSQYGDQFKNILKNNGLKDEA---------------- 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSVTEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFHSGAMTPEFETAAYKLKI 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 ++P + G I + K+DL +K + +I + ++K A Sbjct: 205 GQISDPVQSPNGYHIIKLTGKKDLQPYNEVKDSIRKNLEAERIADPTFSHKLLQKELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|260912811|ref|ZP_05919297.1| peptidyl-prolyl cis-trans isomerase D [Pasteurella dagmatis ATCC 43325] gi|260633189|gb|EEX51354.1| peptidyl-prolyl cis-trans isomerase D [Pasteurella dagmatis ATCC 43325] Length = 625 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 40/400 (10%), Positives = 102/400 (25%), Gaps = 88/400 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + + ++ L + + F + I Y + +NGE IT +R Sbjct: 2 LIEKLHSITNSWVSKLVLGLIAVAFVLSGITGY-VFTNVDTSVAKVNGEEITQQAFHQRY 60 Query: 61 ALLKLQKING----------------ELEKIAVQELI-----------------VETLKK 87 + L + + L+ E +K+ Sbjct: 61 ESEFERLNQQLGSQFAAVAGSKGFVSNLRQSVLNSLVNQELLRQYANDLKLAVSDERIKQ 120 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD---------------------- 125 + + D N + + + G++A+ +++++ Sbjct: 121 EIVTSELFQTDGKFDNNLYQRRLQLNGMNADMYAAYVGEALRLDQLQSGLAESAFSVPAQ 180 Query: 126 --------KQGIGDNHFKQYLAIQSIWPDVVKNDFM------------------LKYGNL 159 Q K L + V + + Sbjct: 181 QDQLTELFFQTRKLRLAKFDLKDEIAQQQVTEEEIKAYYDANKSAFSVPELAKVQYIELT 240 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV--QKRIKDAEESRLRLPKDCN 217 ++ N Q + Y L+ + + + ++ ++ + Sbjct: 241 RADVEKNIQVTDVEIAQYYQDNKALYVSQGQQRISHIELATEQDAQEVYAALQDGANFAG 300 Query: 218 KLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 + KI + G +L L F++ + P I + D+ Sbjct: 301 LASARSLDKISAANGGDLSWLSAGGLPKAFEDAANALEVGKFSQPVKVDSHYHIILVTDR 360 Query: 276 R--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + +K ++ Q + K++ A Sbjct: 361 KSAEALPLSVVKTQIADQIRQNLVNNQYFSVEKQMAEKAF 400 >gi|308063037|gb|ADO04924.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori Sat464] Length = 299 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 81/281 (28%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + ++ +E T Sbjct: 40 SSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKT- 97 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + E + + F + + + K Sbjct: 98 -------------EKLDQTPEFKAMMEAVKKQALVEFWAKK----------QAEEVKKIQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + + T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295 >gi|330959391|gb|EGH59651.1| periplasmic folding chaperone [Pseudomonas syringae pv. maculicola str. ES4326] Length = 627 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 66/195 (33%), Gaps = 6/195 (3%) Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 F + + ++ K+ F K + ++ A QK + Sbjct: 214 IKAHYDQHAKEFMSPEQVVLDYIELKKSSFFDKVQVKDEDLQAAYQKEIANLAEQRRAAH 273 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD 241 +L N N+ + +I++ ++ + ++++ G Y + Sbjct: 274 ILI--EVNDKLNEEQAKAKIEEIQQRLAKGEDFAALAKEYSQDPGSSNKGGDLGYAGKGV 331 Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIE 298 P F++ L +++ + P T G I + + +LK L+ ++E Sbjct: 332 YDPAFEDALYALNKDQVSQPVRTDFGWHLIKLLGVEAPSVPTFASLKDKLTNDLKSQQVE 391 Query: 299 KHEAEYVKKLRSNAI 313 + E K+L +A Sbjct: 392 QKFVEVTKQLEDSAF 406 >gi|254778889|ref|YP_003056994.1| Peptidyl-prolyl cis-trans isomerase C (PPIase) (Rotamase); putative signal peptide [Helicobacter pylori B38] gi|254000800|emb|CAX28724.1| Peptidyl-prolyl cis-trans isomerase C (PPIase) (Rotamase); putative signal peptide [Helicobacter pylori B38] Length = 299 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 81/281 (28%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + ++ +E Sbjct: 40 SSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEA--- 95 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 A + E + + F + + + K Sbjct: 96 -----------KAEKLDQTPEFKAMMEAVKKQALVEFWAKK----------QAEEVKKIQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + + T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295 >gi|297566395|ref|YP_003685367.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Meiothermus silvanus DSM 9946] gi|296850844|gb|ADH63859.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Meiothermus silvanus DSM 9946] Length = 322 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 17/315 (5%), Positives = 69/315 (21%), Gaps = 29/315 (9%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------------KL 65 + + + + G+ + + + Sbjct: 10 VCFGLALAQQTQPQQVQPADDPVVAEVGGQALKKSYFDFEWSFFVKTSLQRQGMPATPES 69 Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 + + + L + + E++G+ V + ++ + Sbjct: 70 EAQFERFKPQFLGRLAKDYAVIKASERAGLAASKEAVENQVAEARKDFESDEAFNQALSQ 129 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + ++ + + ++ + E + + Sbjct: 130 VGIASIDDYRMLVYEALTYNAYLEQ-LQEQVKPSESALRLIYGLSQAEFTTPETYCASHI 188 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHP 244 + Q + ++++ + G Sbjct: 189 LVVSGDEAISLIRQ---------LGQGADFATLAKQYSQDPGSKDNGGDLGCEPRGTYVA 239 Query: 245 QFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 F+N + + T+ P T+ G I + + + +++ Sbjct: 240 PFENAMIRLKAGQTSREPVRTEFGFHIIRLNKIEPSTV--RPFDEVKSSIAERVVQRALE 297 Query: 303 EYVKKLRSNAIIHYY 317 + + ++ I Y Sbjct: 298 KLLDRIAQRVGITLY 312 >gi|75762890|ref|ZP_00742701.1| Peptidyl-prolyl cis-trans isomerase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228899846|ref|ZP_04064091.1| Foldase protein prsA 2 [Bacillus thuringiensis IBL 4222] gi|74489622|gb|EAO53027.1| Peptidyl-prolyl cis-trans isomerase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228859750|gb|EEN04165.1| Foldase protein prsA 2 [Bacillus thuringiensis IBL 4222] Length = 285 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 81/304 (26%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T +T D K+ LK + L ++ Sbjct: 4 KQIFIITALISILMLSACGQKNESATVATATDSTVTKDDFEKQ---LKDRYGKDMLYEMM 60 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 Q++I + K VN + + G F ++ Sbjct: 61 AQDVITKKYK----------VSDEEVNKEVEKVKKQYG------DQFKKVLENNGLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSITEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ + ++ + + G Y + P+F+ K + Sbjct: 145 SDENEAKEIKSKLDAGASFEELAKQESQDLLSKDKGGDLGYFNSGTMAPEFETAAYKLNV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+DL +K + +I + +++ A Sbjct: 205 GQISNPVKSSNGYHVIKLTDKKDLKPYDEVKKSIRKNLEEERIADPIFSKKLLQEELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|330503121|ref|YP_004379990.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas mendocina NK-01] gi|328917407|gb|AEB58238.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas mendocina NK-01] Length = 615 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 30/268 (11%), Positives = 88/268 (32%), Gaps = 14/268 (5%) Query: 54 GDISKRIALLKLQKINGELEKIAVQELIV----ETLKKQEIEKSGITFDSNTVNYFFVQH 109 + +++ +LQ E++ + +L + ++ ++ + T ++ + Sbjct: 137 DQVIRQMGYTRLQFRQMLEEEMLIGQLRAGLGASSFVTEQEARAFANLERQTRDFASLTI 196 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + + + + F + + ++ K+ F + + ++ + Sbjct: 197 KADPAAVELNDADVKAYYDEHASEFMSPEQVVLEYVELQKDSFFDQVEVSDEDLKPLYES 256 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HD 228 + +L + + +I++ ++ ++F+ Sbjct: 257 EIANLAEQRQAAHILI------EGDDEAARSKIEEIKKRVDAGEDFAALAKEFSQDPGSA 310 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALK 285 V G Y P F+ L Q + P ++ G I + + ++ +LK Sbjct: 311 VDGGDLGYAGPGVYDPAFEKALYALQQGQVSEPVKSEFGWHLIKLLGVQAPEVPSFDSLK 370 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 L+ ++E+H E K+L A Sbjct: 371 DKLARDFKAQQVEQHFVEATKQLEDAAF 398 Score = 63.2 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 55/164 (33%), Gaps = 16/164 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I + ++++ + + + +NG+ IT ++++ + Sbjct: 1 MLQNIRDNSRGWIAKIIIGLIVMLMAFTGFEAIVTGTSNRNNAADVNGDTITLNELNQAV 60 Query: 61 ALLKLQ-------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q L + +++ LI L Q + F +++ Sbjct: 61 EMQRRQLLQQLGRDFDASLLDEKLLREASLKGLIERKLLLQAANDAHFAFSQGSLDQVIL 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 + + A F + + G F+Q L + + + Sbjct: 121 QTPEFQVDGRFDASRFDQVIRQMGYTRLQFRQMLEEEMLIGQLR 164 >gi|121612944|ref|YP_001000964.1| hypothetical protein CJJ81176_1306 [Campylobacter jejuni subsp. jejuni 81-176] gi|167005873|ref|ZP_02271631.1| hypothetical protein Cjejjejuni_06850 [Campylobacter jejuni subsp. jejuni 81-176] gi|87249622|gb|EAQ72581.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 271 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 78/296 (26%), Gaps = 32/296 (10%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 I+ S S + I ++ E IT DI + + LK+ A+ LI Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKALKID------RNKALGVLIN 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E ++ ++++ GI + ++ + + F + L + F+ Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNRSYEQFRTNFKKDL 117 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + + + + Y + +N + + Sbjct: 118 EKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANIYLSNNPQTLENIKNTKK 177 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 + L + L + + Sbjct: 178 TILKPQNASLN------------------------TSNADPRLLGLLSQIPVGGFSPVLN 213 Query: 263 TQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G E + K +K + + + +Y KLRS I Y Sbjct: 214 GKNGYELYEVKSKDGTQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 269 >gi|323343303|ref|ZP_08083530.1| peptidyl-prolyl cis-trans isomerase [Prevotella oralis ATCC 33269] gi|323095122|gb|EFZ37696.1| peptidyl-prolyl cis-trans isomerase [Prevotella oralis ATCC 33269] Length = 478 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 30/261 (11%), Positives = 72/261 (27%), Gaps = 12/261 (4%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEI 90 + + + E I D+ + + + G+ + I +++ V+ L + Sbjct: 45 IPENSTIDEVIWVVGDEPILKSDVEAMRLQAEAEGVKWSGDPDYIIPEQIAVQKLFLHQA 104 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK- 149 E I ++ Q A + + +Q + + +V+ Sbjct: 105 EIDSIEVSETEISSGLDQQINRWIQMAGSREKLEEWRNQTIAQMRQQMHDEYKNTQLVQK 164 Query: 150 --NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + ++ + + ++ + I Q V + + Sbjct: 165 MRQELVKDVKVTPADVRNYFRNLPEDSIPFVPTEVEVEIITKQPKITQEEVNRVKDELRG 224 Query: 208 SRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKKSQN--NTTNP 260 R+ K A G+ Y L P F ++ + + Sbjct: 225 FTDRVMKGETTFATLARLYSEDPGTARQGGELGYTGRGMLDPAFASVAFNLTDPKKISKI 284 Query: 261 YVTQKGVEYIAICDKRDLGGE 281 T+ G I + DKR Sbjct: 285 VETEFGYHIIQLIDKRGDKVN 305 >gi|52425898|ref|YP_089035.1| SurA protein [Mannheimia succiniciproducens MBEL55E] gi|52307950|gb|AAU38450.1| SurA protein [Mannheimia succiniciproducens MBEL55E] Length = 622 Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 38/399 (9%), Positives = 95/399 (23%), Gaps = 88/399 (22%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 K+ + + + + + F + + Y A + INGE I+ ++ Sbjct: 3 MEKMHNASNSIFSKIIFALISVAFVVSGMAGYM-VATADTSAVKINGEEISQQAFQQQYN 61 Query: 62 LLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 + L K + LI + L +Q + + +V Sbjct: 62 DEYQRLSQQLGAQFSAVADTPEFSEGLRKSVLNRLIDQELLRQYVTDLKLVASDASVKQE 121 Query: 106 F---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF---------- 152 + + L + + + +Y+ + Sbjct: 122 IVTTPAFQADGKFDNNAYQQTLRANNMTADMYAEYVREALRLDQLQSGLAGTVLMLPAQQ 181 Query: 153 -----------------------MLKYGNLEMEIPANKQKMKNITVREYLIR-------- 181 M K + E+ K+ + L++ Sbjct: 182 EEFAKLFFQKRTFRLAKLPLTAEMAKQTVTDQEVADYYNANKSAFMVPELVKVQYLDITR 241 Query: 182 -----------TVLFSIPDNKLQNQGFVQKRIKDAEE--------SRLRLPKDCNKLEKF 222 + + + + + ++ Sbjct: 242 AAAEKAVKVTDVEIQQYYQDNKAQFVSKAQDRLAHIQFAKETDALDAYQALQNGADFAAL 301 Query: 223 AS-----KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276 A K V+ G+ +L DL F+ + P I + D++ Sbjct: 302 AKEKSLDKPSAVNGGELGWLNAGDLPKAFEEAAAALQIGQYSQPVKVDNQYHIIKLEDRK 361 Query: 277 DLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + +K +++Q + K++ A Sbjct: 362 EPKAQSLEEVKDLIASQIRQDLLNNQFYSLEKQVAEKAF 400 >gi|254522729|ref|ZP_05134784.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Stenotrophomonas sp. SKA14] gi|219720320|gb|EED38845.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Stenotrophomonas sp. SKA14] Length = 299 Score = 81.6 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 20/271 (7%), Positives = 72/271 (26%), Gaps = 40/271 (14%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 ++ I++ +I++ + + + + A ++ E L+ + + V+ Sbjct: 48 VDETAISEAEIAREMQHHRAMRPEQSRAEAARALVVRELLRLEAQRLGLQALEGGRVSD- 106 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + + ++++ + E Sbjct: 107 ----------------------------------EEVLIQQLLEDAIDDRVPTDEDCRRY 132 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD--CNKLEKFA 223 +Q + + + + F + + L+ + + + Sbjct: 133 FEQNPERFRSPDRVRLRHILLAAPADDVAGRFAARTEGERLVGLLKESPHLFADFALRHS 192 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRD--LGG 280 G +L P+F + + + P ++ G + + + + Sbjct: 193 RCPSSSEGGDLGWLQRGQTTPEFDRQVFRLREGLAGFPVESRWGYHVVCVDAREEGQPQP 252 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 A+ L ++ Y+ +L+ Sbjct: 253 FEAVLPQLRDYLELQVRQREVQAYLLQLQER 283 >gi|300853330|ref|YP_003778314.1| putative foldase-like protein [Clostridium ljungdahlii DSM 13528] gi|300433445|gb|ADK13212.1| putative foldase related protein [Clostridium ljungdahlii DSM 13528] Length = 247 Score = 81.6 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 30/281 (10%), Positives = 79/281 (28%), Gaps = 39/281 (13%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 M + + +NG I + D+ + I K N + L+ E + + Sbjct: 1 MQNNVLAIVNGMEIKESDLKEAINRFPQDKRNQLNTAEGKKYLLNEMVFFELAYSYAKDE 60 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + + + + + + + M K Sbjct: 61 NLEKDDEYLKMLES--------------------------AKKEILTQIAI-SKVMNKVN 93 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + E + K++ + ++ + + + + Sbjct: 94 VTDKESQDYYEANKDMYKKPERLKAKHILVDSIEKAKKISKE---------ISEGMPFEE 144 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT-TNPYVTQKGVEYIAICDKR 276 +K+++ G + P+F+N + + P TQ G I + +K Sbjct: 145 AAQKYSTCPSKAQGGSLGEFARGQMVPEFENAAFSLDIDVVSEPVKTQFGYHLIKVEEKI 204 Query: 277 DLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +K + + + +++ K+LRS + Sbjct: 205 EPSIASYDEVKNAIKNGLLQERQKYEYSKFNKELRSKYKVE 245 >gi|229108722|ref|ZP_04238332.1| Foldase protein prsA 2 [Bacillus cereus Rock1-15] gi|228674752|gb|EEL29986.1| Foldase protein prsA 2 [Bacillus cereus Rock1-15] Length = 285 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 27/304 (8%), Positives = 76/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT + K++ K Sbjct: 4 KHIFIITALISILMLSACGQKNGSATVATATDSTITKDNFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + + + + F ++ Sbjct: 56 LYEMMAQDVITKKYKVPDEEVNKEVE-----------KVKKQYGDQFKKVLENYGLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSITEKDIKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ + ++ + + G Y + P+F+ K + Sbjct: 145 SDENEAKEIKSKLDAGASFEELAKQESQDLLSKDKGGDLGYFNSGTMAPEFETAAYKLNV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+ L +K + + + +++ A Sbjct: 205 GQISNPVKSSNGYHVIKLTDKKALKPYDEVKDSIRKNLEEERTADPVFSKKLLQEELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|308061465|gb|ADO03353.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori Cuz20] Length = 299 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 82/281 (29%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G+ IT D I +L++ + LI + ++ +E T Sbjct: 40 SSAGVLATVDGKPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKT- 97 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + E + + F + + + K Sbjct: 98 -------------EKLDQTPEFKAMMEAVKKQALVEFWAKK----------QAEEVKKIQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKTKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + N T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGNYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295 >gi|152978448|ref|YP_001344077.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Actinobacillus succinogenes 130Z] gi|150840171|gb|ABR74142.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Actinobacillus succinogenes 130Z] Length = 624 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 47/400 (11%), Positives = 108/400 (27%), Gaps = 88/400 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT-------- 52 + K+ + ++++ + + F + + Y + S +NGE I+ Sbjct: 2 LMEKLHHAANNWVSKAILGAIAVSFVVSGMYGYLGSSSDSSAV-KVNGEEISQQNFQQQY 60 Query: 53 DGDISKRIALLKLQ--------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + L Q + L + + LI + L +Q ++ I + Sbjct: 61 NNEFQRLEQQLGPQFAALSDTPEFTAGLRQTVLNRLIDQELLRQYGDELNIAVSDEQIKR 120 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + + S E + FL + + + QYL + Sbjct: 121 EIVRTPEFQVDGKFSNETYQLFLRNNNLSSDTYAQYLREALRLAQLQSALTDTAFLLPAN 180 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIR------- 181 + K E EI K+ LI+ Sbjct: 181 QEAFAKGFFQSRAVRLAHLPLAAEIAKQTVTEEEIQNYYNSNKSAFTVPELIKVQYLDLT 240 Query: 182 ------------TVLFSIPDNKLQNQGFV------------QKRIKDAEESRLRLPKDCN 217 + + + +K DA E+ + Sbjct: 241 QAAAEKTVKVTDVEIQQYYQDHKADFTTKGQERLAHIQLANEKEALDAYEALQKGADFAT 300 Query: 218 KLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 ++ + K+ V+ G +L DL +F++ + + P I + ++ Sbjct: 301 LAKEKSNDKVSAVNGGDLGWLNTGDLPKEFEDAATILEVGHYSTPVNVDGQFHIIQVLER 360 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +D +K ++ + K+ A Sbjct: 361 KDSALLPLEQVKERITQAIRQDLVGNQFYAMEKQAAEKAF 400 >gi|317010455|gb|ADU84202.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori SouthAfrica7] Length = 299 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 78/281 (27%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + ++ +E Sbjct: 39 ASAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEA--- 94 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 A + E + + F + + + K Sbjct: 95 -----------KAEKLDQTPEFKAMMEAVKRQALVEFWAKK----------QAEEVKKIQ 133 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 134 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKTKKEAKFIELAN 193 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT--NPYVTQKGVEYIAICDK 275 + + + + G ++ + P F T P T+ G I + K Sbjct: 194 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGTYTKTPVKTEFGYHIIYLISK 253 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 254 DSPITYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 294 >gi|208434128|ref|YP_002265794.1| peptidyl-prolylcis-transisomerase C [Helicobacter pylori G27] gi|208432057|gb|ACI26928.1| peptidyl-prolylcis-transisomerase C [Helicobacter pylori G27] Length = 299 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 30/281 (10%), Positives = 77/281 (27%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + + Sbjct: 40 SSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIEQAI-------RTALV 91 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 ++ + L + + + + K Sbjct: 92 ENEAKTEKLDSTPEFKAMMEAVKKQALVEFWAKK-----------------QAEEVKKIQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + + T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295 >gi|281357480|ref|ZP_06243968.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Victivallis vadensis ATCC BAA-548] gi|281316083|gb|EFB00109.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Victivallis vadensis ATCC BAA-548] Length = 361 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 28/310 (9%), Positives = 80/310 (25%), Gaps = 32/310 (10%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL-----------IVETL 85 A + I + IT ++ + L Q +G++ + +L + + + Sbjct: 48 AKLPDVVAQIGDKKITKQEV---LKPLLAQMPDGKVPSMMADQLDNAAPGVIKWFVDQQI 104 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------DFSSFLDKQGIGDNHFKQYL 138 + K+G G + +Q + + Sbjct: 105 LEAAAAKAGFKPSKEHAQKAVKAQWEKVGKEDRERFAQMLQIQNKTVEQYQEEMVSNPEI 164 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL--------IRTVLFSIPDN 190 Q + +K + + ++ + Sbjct: 165 QKQIALDEFLKTKIAEPTVTEAEMRKYYDENKQKEFSTPADRPGTFRASHILIMVDDKAD 224 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL- 249 + + + + E + + + + G + ++ P+FQ Sbjct: 225 DAAKKAALDQINAISAELKKDPARFEALAREKSGCPSKAKGGSLDSFSDKEMVPEFQKAL 284 Query: 250 LKKSQNNTTNPYVTQKGVEYIA--ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + P TQ G I + +K + K + +Y+ + Sbjct: 285 EGLKEGEISAPVKTQFGYHIIRRDKLQSEKVESFDNVKETVGNILKRQKQMQAFTDYMAQ 344 Query: 308 LRSNAIIHYY 317 L ++ + ++ Sbjct: 345 LEKDSGVKFF 354 >gi|71083415|ref|YP_266134.1| SurA-like protein [Candidatus Pelagibacter ubique HTCC1062] gi|91762162|ref|ZP_01264127.1| hypothetical SurA-like protein [Candidatus Pelagibacter ubique HTCC1002] gi|71062528|gb|AAZ21531.1| hypothetical SurA-like protein [Candidatus Pelagibacter ubique HTCC1062] gi|91717964|gb|EAS84614.1| hypothetical SurA-like protein [Candidatus Pelagibacter ubique HTCC1002] Length = 305 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 111/302 (36%), Gaps = 19/302 (6%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI------NGELEKIA 76 I+ + I+ + + ++ ++I I E+IT+ DI L ++ I+ Sbjct: 5 ILIFLFVIICFHAQSIETKIIHNIQDEIITNIDIKNEFKYLVALNNSLKELDQEKILNIS 64 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTGLSAEDFSSFLDKQGIGDNH 133 + +I E +KK EI K+ N ++R S +F +L + + Sbjct: 65 NESIIREKIKKIEISKNFKEIKLNEDYSELLLKNIYSRLNLKSINEFEIYLKDYDLKISD 124 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 ++ + I ++W +++ + K E + K I +EY + ++F + + + Sbjct: 125 IEKKITIDALWNELIIKKYSSKVVINEAVLKEELLKNNKIESKEYQLSEIIFEVKNKEEI 184 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK- 252 + + + E N ++ G ++ E+ L+ + + Sbjct: 185 EKKYKEVVKSINEIG------FENSAATYSFSDSAKIGGDIGWINENSLNNNIRKNISSL 238 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN---TPTKIEKHEAEYVKKLR 309 T P + G+ + + + + I ++ L ++ ++ Y K++ Sbjct: 239 KVGEFTKPIILSNGILILKLINIKSSETTIDIENELKKAINYERNRQLNQYSKIYYNKIK 298 Query: 310 SN 311 N Sbjct: 299 KN 300 >gi|23098603|ref|NP_692069.1| post-translocation molecular chaperone [Oceanobacillus iheyensis HTE831] gi|46396906|sp|Q8CXK4|PRSA_OCEIH RecName: Full=Foldase protein prsA; Flags: Precursor gi|22776830|dbj|BAC13104.1| protein secretion (post-translocation molecular chaperone) [Oceanobacillus iheyensis HTE831] Length = 299 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 24/302 (7%), Positives = 82/302 (27%), Gaps = 40/302 (13%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 + + +++ + I IT + + + + + +Q+L+ Sbjct: 6 IAASLSIGVLALSACNSDDEIVAETEAGNITKEEFYEELKDVNG--------ESTLQQLV 57 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + + + + ++ + G + L Sbjct: 58 TVKVLE-----DNYEVTDEELEEEISTMKEGFPSEEDFNTTVEQQFGGEE-----QLREI 107 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + + E ++ ++ ++++ ++ Sbjct: 108 MYVSMLQEKAAAEDVEITEEDLQELYERKNTEIQAQHILL---------------ENEED 152 Query: 202 IKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 + + ++ +++++ + G Y + P+F+ ++ Sbjct: 153 VAEVQQKIEDGEDFGELAQEYSTDTGSAENGGDLGYFSAGSMVPEFEEAAFSLEAGEISD 212 Query: 260 PYVTQKGVEYIAICDKRD----LGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAII 314 P + G I + D R+ +G +K L + E + KL +A + Sbjct: 213 PVQSTHGTHIIKVNDVREKEESIGEFEDVKKELEREILLNRVDQTQIQEKINKLIQDAGV 272 Query: 315 HY 316 Sbjct: 273 QI 274 >gi|86153052|ref|ZP_01071257.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|88596815|ref|ZP_01100052.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 84-25] gi|157415552|ref|YP_001482808.1| hypothetical protein C8J_1232 [Campylobacter jejuni subsp. jejuni 81116] gi|85843937|gb|EAQ61147.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|88191656|gb|EAQ95628.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 84-25] gi|157386516|gb|ABV52831.1| hypothetical protein C8J_1232 [Campylobacter jejuni subsp. jejuni 81116] gi|284926513|gb|ADC28865.1| possible periplasmic protein [Campylobacter jejuni subsp. jejuni IA3902] gi|307748192|gb|ADN91462.1| probable periplasmic protein [Campylobacter jejuni subsp. jejuni M1] gi|315932440|gb|EFV11383.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni 327] Length = 271 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 78/296 (26%), Gaps = 32/296 (10%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 I+ S S + I ++ E IT DI + + LK+ A+ LI Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKALKID------RNKALGVLIN 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E ++ ++++ GI + ++ + + F + L + F+ Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRTNFKKDL 117 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + + + + Y + +N + + Sbjct: 118 EKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANIYLSNNPQTLENIKNTKK 177 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 + L + L + + Sbjct: 178 TILKPQNASLN------------------------TSNADPRLLGLLSQIPVGGFSPVLN 213 Query: 263 TQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G E + K +K + + + +Y KLRS I Y Sbjct: 214 GKNGYELYEVKSKDGTQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 269 >gi|309791442|ref|ZP_07685948.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oscillochloris trichoides DG6] gi|308226521|gb|EFO80243.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oscillochloris trichoides DG6] Length = 363 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 32/287 (11%), Positives = 79/287 (27%), Gaps = 33/287 (11%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLK 86 +P+ S+ T + VIT G+ + G+ +++LI L Sbjct: 90 ALPLPQAIGDVTSTEPITQVGDAVITRGEFVRAY-------QPGDEVSAVLKQLIQVELL 142 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 Q+ G+T +++ ++ + G E + Q + + + + Sbjct: 143 LQQAGVEGVTVEASELDAEIAAIKSSFGTPEEFTAMLAANQIESEEAMRSIIERNMLIDK 202 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 +V + + T+ + R +L + + + + I Sbjct: 203 MV---------------------LSHTTMEQVHARHILLATTAETVDARKAEAEAI---L 238 Query: 207 ESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 + + G + F + Q + T Sbjct: 239 AQIQGGADFAQLAAEKSEDPGSKDKGGDLGWAGRGMFVGPFDEAVFSMQKDEVRLVQTDF 298 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 G I + D + + L + ++ +L ++A Sbjct: 299 GWHIIQVLDPSTVRS-LDSADLLQTMAGQQAFTETFMVWLDQLYTDA 344 >gi|148244641|ref|YP_001219335.1| hypothetical protein COSY_0492 [Candidatus Vesicomyosocius okutanii HA] gi|146326468|dbj|BAF61611.1| hypothetical protein [Candidatus Vesicomyosocius okutanii HA] Length = 297 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 107/295 (36%), Gaps = 10/295 (3%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 ++ + S+ +A+ + I +N ++IT IS I + L V + I Sbjct: 8 TLLLICVFSFNIFAIPNSIVAIVNDDLITFDQISIDIKPNYTKAQKLTL----VNQQIDL 63 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 L+ Q+I++ I N +N A N LS S + ++ + Sbjct: 64 ILQLQKIKQLSIVPKENVINSMLGNIALNNDLSLIQLQSLPQFDKVINHVKQNLSLEGLK 123 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + + ++ ++E+ +K + + + + N++ + ++ R+ Sbjct: 124 H--FIIENLNIELTDVEISKQLSKTPNHLNKLEKQIRIAQITINSTNQVDSNRLIKDRLI 181 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYV 262 D E + + ++ + ++ +L S L FQ + P+ Sbjct: 182 DLSEKINKGDSFSILKKIYSQDNFYKNDSESIWLNLSKLPKAFQQSLKGLLVGEISQPFK 241 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + I DKR + + L A+ K + + +VKK+R A I + Sbjct: 242 IGQVWRIVKIIDKRSVDNYLV---ELKAKLIRQKEDTYFYNWVKKIRKEAYIKIF 293 >gi|171060801|ref|YP_001793150.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptothrix cholodnii SP-6] gi|170778246|gb|ACB36385.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptothrix cholodnii SP-6] Length = 359 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 32/288 (11%), Positives = 75/288 (26%), Gaps = 20/288 (6%) Query: 44 TTINGEVITDGDISK------RIALLKLQKINGEL---EKIAVQELIVETLKKQEIEKSG 94 T+ VI+ D + R + E + E++ L E + G Sbjct: 59 ATVGDTVISRADYQRALAVAMRKKYYHAKPPEAEFARFRREVGDEVVNRVLLLAEARRRG 118 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 I D + + +++ + L +S+ + Sbjct: 119 IVPDREQIAATVAGYDAQY----ASSANWQANRDQMLAAVLPQLESESLLERL-GQLVKR 173 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR--- 211 E + A + + +R + + + Q + + R Sbjct: 174 VPEPAEPVLRAYHAQHPALFTEPEQVRLSVILLKVDPSSPQAMWDAAHAEGRQLHRRLLA 233 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + + + G+ Y L ++ + P +GV + Sbjct: 234 GADFGDLARLHSGDRSAAAGGQMDYAHRGMLPEAVHGVVDALPPGGLSAPVQLLEGVAIL 293 Query: 271 AICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + D+R ++A + + + E + LR I Sbjct: 294 RLDDRRPARLRAFEQVRARAAELWQREQAQARWTELIDTLRRGTAIRI 341 >gi|288818384|ref|YP_003432732.1| hypothetical protein HTH_1073 [Hydrogenobacter thermophilus TK-6] gi|288787784|dbj|BAI69531.1| hypothetical protein HTH_1073 [Hydrogenobacter thermophilus TK-6] gi|308751977|gb|ADO45460.1| SurA domain protein [Hydrogenobacter thermophilus TK-6] Length = 290 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 100/304 (32%), Gaps = 25/304 (8%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L I+ + S + + ++ ++NGE I + D+ Q Sbjct: 4 KGLKGISCGILLLATLVASAFAQKLVDKVIASVNGEPILESDVKLAELFYGTQD-----R 58 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + +L+ L Q +E G ++ + A+ E + L K+ + + Sbjct: 59 HKVINKLVDVYLLAQFLESRGGRVPEEYISATLMDIAKANNTDLEGLAKELAKEELTLDD 118 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 K++L + + + + ++++ K K + +R + VL Sbjct: 119 LKRFLEKELLSTQGLSIYLSKEIKVSDLDVELEKLKRGEVKLRRDIDLLVLDKKDG---- 174 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 +++ E R L + + + DL + K+ Sbjct: 175 ------EKLLKMMEERKTLQDIARAFSAKVESLS---------VEKGDLVEPLDKEVWKA 219 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 NT + + + D++++ + L + KIE+ E ++ L+ + Sbjct: 220 PLNTLVVAEDGEHIYLAQVKDQKEIYSG-VSEDELRKEILAKKIEEKRRELLENLKKKSF 278 Query: 314 IHYY 317 + + Sbjct: 279 VKIF 282 >gi|167836282|ref|ZP_02463165.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia thailandensis MSMB43] Length = 259 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 81/278 (29%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I IA L Q +LE+ QEL+ + QE K GI + Sbjct: 25 IAVVNGTPIPKSRADAMIAQLVQQGQQDTPQLEQAVRQELVNREILMQEAIKRGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q+ + DF+ K + Sbjct: 85 VKAQIV-------------------------------VAQQTAVLRALIEDFLKKNQPSD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A ++ + +++ KD K + + Sbjct: 114 AELKARYDELVKNAGGREYHLHHILVDN----------EQQAKDLIAKIKGGAKFEDLAK 163 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +F+ + G + P+F ++ + T+ P TQ G I + D R Sbjct: 164 QFSKDPGSAKNGGDLDWSDPKAYVPEFAAAAQQLQKGQMTDAPVKTQFGWHIIRVDDVRS 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + Q +++ + + LR A I Sbjct: 224 ITP--PPFEQVKQQIAQQMVQQKLQTFEEGLRQQAKIQ 259 >gi|126649428|ref|ZP_01721669.1| peptidylprolyl isomerase [Bacillus sp. B14905] gi|126593753|gb|EAZ87676.1| peptidylprolyl isomerase [Bacillus sp. B14905] Length = 326 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 84/312 (26%), Gaps = 49/312 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 + T L + V + S S I T + I+ D +++ L Sbjct: 1 MKKTVLSLTLAASVLALGACSGGDSKAIVTSKVGD--ISVADFNEKAKSLTGSY------ 52 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +Q+L+ E + + + A G + G Sbjct: 53 --VLQQLVTEKVL-----SDKYEVTDKELKEAYDTTASQFGDGFAQALAESGLTEQGF-- 103 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 S+ +++ + E ++ N Sbjct: 104 ------KDSLRVQLLQEKALKDQAIKEEDVKKYY---------------EQMKTELNGRH 142 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK 252 +K K+A E K + +++++ + G+ + + +F + Sbjct: 143 ILVADEKTAKEAIEKIKGGAKFADVAKEYSTDTASAQNGGELGWFSVGSMVDEFNDAAYA 202 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTK-----IEKHEAE 303 N + P + G I I DKRD+ + + + + Sbjct: 203 LELNTLSEPVKSSFGYHVIEITDKRDVKDVGAFKDEEEKIRTSMLSKLNQTGEAQTILKD 262 Query: 304 YVKKLRSNAIIH 315 V K+ +A + Sbjct: 263 IVAKMAKDANVK 274 >gi|189485156|ref|YP_001956097.1| rotamase surA-like protein [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|189485167|ref|YP_001956108.1| rotamase surA-like protein [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287115|dbj|BAG13636.1| rotamase surA-like protein [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287126|dbj|BAG13647.1| rotamase surA-like protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 351 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 113/342 (33%), Gaps = 38/342 (11%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK-------- 64 +K + + F + + + + +NG+ I + +++K LK Sbjct: 1 MKKFFSVLAVTFFIVGVGSIFAAPKKVDQTLAIVNGKPIFESEVNKVFNNLKSDMLASEQ 60 Query: 65 -LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 ++ EL+ ++ I L K EI+K I V + + +N + E Sbjct: 61 WSEQKINELKNRILERQIDSILLKNEIKKQKILVSRKEVLEYIKELKKNHAIDEELSKQN 120 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDV---VKNDFMLKYGNLEMEIPANKQKMKN-------- 172 L + + + + ++ + + + + + ++ + Sbjct: 121 LTYKDLEKSVSEIIRFMKLLGKILDVNAEKITEAEIKSFYDKVIIKMKGGNPGLSHDKDC 180 Query: 173 -----------ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + I+ + P + V + + + L++ K Sbjct: 181 LAASVADELKKVFSENVRIKQIFIKNPKGTQDAETQVVQSKVETVKKELQVKSFAEVARK 240 Query: 222 FASKI-HDVSIGKAQ-YLLESDLHPQFQN-LLKKSQNNTT-NPYVTQKGVEYIAICDK-- 275 ++ + G ++++ DL + + + T P T G +I + +K Sbjct: 241 YSEDLISKSRNGDLGIFVVKGDLPLVLEKAVFSMKVGDYTKEPIKTDIGYYFIKLEEKLP 300 Query: 276 -RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 R + + +K Y++++ E+ Y+ LR+ A I Sbjct: 301 NRKIVFDGKVKDYINSRLLQFNNEQACIRYISTLRTKANIKI 342 >gi|330963316|gb|EGH63576.1| periplasmic folding chaperone [Pseudomonas syringae pv. actinidiae str. M302091] Length = 627 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 63/194 (32%), Gaps = 6/194 (3%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 F + + ++ K+ F K + ++ A QK + + Sbjct: 215 KAHYDQHAKEFMSPEQVVLDYIELKKSSFFDKVTVKDDDLQAAYQKEIANLSEQRRAAHI 274 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 L N N + ++++ ++ + ++F+ G + + Sbjct: 275 LI--EVNDKLNDEQAKAKVEEIQQRLAKGESFAALAKEFSQDPGSSSKGGDLGFAGKGVY 332 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 P F+ L +++ + P T G I + + +LK LS +E+ Sbjct: 333 DPAFEEALYALNKDQVSQPVRTDFGWHLIKLLGVEAPSVPTFASLKEKLSNDLKSQLVEQ 392 Query: 300 HEAEYVKKLRSNAI 313 E K+L +A Sbjct: 393 KFVEVTKQLEDSAF 406 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 32/326 (9%), Positives = 82/326 (25%), Gaps = 32/326 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + I + + + + +NGE IT ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIIALMAFTGIEAMFTATSNKQNAAEVNGEDITQNELSQAV 60 Query: 61 ALL-----------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + L + A++ LI L Q + +F ++ Sbjct: 61 DMQRRQLAQQLAQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGAGDARFSFSDAALD 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE-ME 162 +Q F Q+ Q + +++ + Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRMQF--RQMLGQEMLIGQVRAGVAGSAFVT 178 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + L + P V+ + + + + Sbjct: 179 DAQVDAFARLEKQTRDFASLTLPADPSAVKVTDDEVKAHYDQHAKEFMSPEQVVLDYIEL 238 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGE 281 + + + DL +Q N ++ I + DK + Sbjct: 239 KKSSFFDKV----TVKDDDLQAAYQK-------EIANLSEQRRAAHILIEVNDKLNDEQA 287 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKK 307 A + + + A+ + Sbjct: 288 KAKVEEIQQRLAKGESFAALAKEFSQ 313 >gi|229149467|ref|ZP_04277703.1| Foldase protein prsA 2 [Bacillus cereus m1550] gi|228634109|gb|EEK90702.1| Foldase protein prsA 2 [Bacillus cereus m1550] Length = 282 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 27/304 (8%), Positives = 76/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT + K++ K Sbjct: 4 KHIFIITALISILMLSACGQKNGSATVATATDSTITKDNFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + + + + F ++ Sbjct: 56 LYEMMAQDVITKKYKVPDEEVNKEVE-----------KVKKQYGDQFKKVLENYGLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSITEKDIKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ + ++ + + G Y + P+F+ K + Sbjct: 145 SDENEAKEIKSKLDAGASFEELAKQESQDLLSKDKGGDLGYFNSGTMAPEFETAAYKLNV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+ L +K + + + +++ A Sbjct: 205 GQISNPVKSSNGYHVIKLTDKKALKPYDEVKDSIRKNLEEERTADPVFSKKLLQEELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|332305578|ref|YP_004433429.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172907|gb|AEE22161.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 627 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 29/244 (11%), Positives = 72/244 (29%), Gaps = 11/244 (4%) Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + L+ E T + ++ + S + N Sbjct: 162 RRQLSNALLGSEFTLLEETTQAYKLQQQTRDARYLTVPADMFKGDVTVSQSDVENYYQAN 221 Query: 133 HFKQYLAIQ--SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + Q + ++ +D + E E ++ + R I Sbjct: 222 ITQFDTQQQVSLAYVELSVDDLLAGIEVSEDEAEQYYEQNIQDFRTQEERRASHILI--E 279 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL 249 +Q +++ +D E F+S + G + + P F++ Sbjct: 280 FGDDQQKAEQQAEDILAKINNGEDFAELAETFSSDTFSAENGGDLDWFSMGMMDPAFEDA 339 Query: 250 LK--KSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYV 305 ++ + ++ ++ G I + D + + +K + A+ + E+ Y Sbjct: 340 AFALQNVGDVSDVVESEFGFHIIKLTDVKPEETSPFADVKEDVIAKLKAERAEEEF--YA 397 Query: 306 KKLR 309 K+LR Sbjct: 398 KQLR 401 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 24/192 (12%), Positives = 57/192 (29%), Gaps = 20/192 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ + V++ F + SY + + + +N E I+ D+ + Sbjct: 1 MLERIREGTQGTWAMAILGLVILSFVFAGVGSYIN-SSADTAAAKVNDETISQADLERAY 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + + + LI + L +Q G+ + Sbjct: 60 QNERGRMESQYGEAFAALTADSAYLQQFRQGVLDRLIGDKLIEQAAVDLGLRVSDAQIKQ 119 Query: 105 FFVQHARNTGLSAEDFSSFLD---KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 V D + + G N F+ Y+ + + ++ LE Sbjct: 120 AIVAMPEFQFDGKFDNERYSAVLRQAGFQPNEFRDYMRVDMTRRQLSNALLGSEFTLLEE 179 Query: 162 EIPANKQKMKNI 173 A K + + Sbjct: 180 TTQAYKLQQQTR 191 Score = 36.2 bits (81), Expect = 6.6, Method: Composition-based stats. Identities = 25/252 (9%), Positives = 63/252 (25%), Gaps = 4/252 (1%) Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 ++++ + +L E +++ K + + + + Sbjct: 376 ADVKEDVIAKLKAERAEEEFYAKQLRMAEVAFETPDTLDEVAAIAEVDVKTTVMFSQDSA 435 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + Q+ +++ + LE + R + V I D Sbjct: 436 PQAVNYPNVVSQAFSDELINDQVNSDVIELEDNHVMFIRVADYEAQRTKSLDEVSVEIND 495 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 L Q + + + I L Sbjct: 496 ILLAEQAQQAAKEWAETVLSDIQSQQNVSDKLQTKGIEWQEQNAVTRNASQVSPAVVTAL 555 Query: 250 LKKSQNNTT--NPYVTQKG-VEYIAICDKRD-LGGEIALKAYLSAQNTPTKIEKHEAEYV 305 K + + G V + + + + + A L + T + + +E++ Sbjct: 556 FKLTDGEESNGQVVELFNGDVALVQLLEVNEGADLPSSDAAALQNRLTTMRAQFTYSEFI 615 Query: 306 KKLRSNAIIHYY 317 LR A + Y Sbjct: 616 NALREQADVEIY 627 >gi|294789088|ref|ZP_06754327.1| putative PPIC-type PPIASE domain protein [Simonsiella muelleri ATCC 29453] gi|294482829|gb|EFG30517.1| putative PPIC-type PPIASE domain protein [Simonsiella muelleri ATCC 29453] Length = 315 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 43/317 (13%), Positives = 112/317 (35%), Gaps = 14/317 (4%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK-----LQK 67 +K + + + + + + + + T +N +IT GDI + + LL+ Sbjct: 1 MKHIKIITLASLLA-IHFQAAAEIRVLNGVATEVNASIITYGDIERTVRLLRSNPASASI 59 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 N EL K A Q+L+ L ++ G+ S ++ + A + E+ + K Sbjct: 60 SNEELAKTAKQQLMERALLVYAAKEQGLKVTSAEIDAELNRRATAAHTTVENLFNQTKKL 119 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV------REYLIR 181 G + ++ +A + ++ + +I A + + + Sbjct: 120 GWSRDAYRLEVAKDLLVGRMID-RMNESVEVSDNDIQAYINQAQKDGQVVPSGNPYTVYN 178 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + N+ V R+K +S ++++ + G + S Sbjct: 179 VRRIVLKINENNKAAAVGDRMKLIAKSVQSGSDFGTLAKRYSQEAAAAQNGVVELPENSQ 238 Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKH 300 L T+ P T + + + + KR ++ + + + +K Sbjct: 239 PEKVEAMLQLLKVGETSAPIQTTQNWQMLQMLGKRTEIDPTKTQREAIRRLLVRKEQQKQ 298 Query: 301 EAEYVKKLRSNAIIHYY 317 + +++++L +A+++ + Sbjct: 299 QTQFMQQLMHDAVVNNF 315 >gi|317176991|dbj|BAJ54780.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori F16] Length = 299 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 82/281 (29%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G +IT D I +L++ + LI + ++ +E T Sbjct: 40 SSAGVLATVDGRLITKSDFD-MIKQRNPNFDFDKLKEKEKEALIDQAIRTALVENEAKT- 97 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + E + + F + + + K Sbjct: 98 -------------ERLDSTPEFKAMMEAVKKQALVEFWAKK----------QAEEVKKIQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQFFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + + T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYDQAKPTIKGMLQEKLFQERMNQKIEELRKHAKI 295 >gi|30020980|ref|NP_832611.1| peptidylprolyl isomerase [Bacillus cereus ATCC 14579] gi|46396822|sp|Q81CB1|PRSA4_BACCR RecName: Full=Foldase protein prsA 4; Flags: Precursor gi|29896533|gb|AAP09812.1| Protein export protein prsA precursor [Bacillus cereus ATCC 14579] Length = 280 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + V+ + +S + S I TT +G I++ D +K++ K Sbjct: 1 MKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGK 51 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E D Sbjct: 52 QNLSEMVVEKVLHDKYKVTDEEVT---------------KQLEELKDKMGDNFNTYMESN 96 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + V L++ Sbjct: 97 GVKNEDQLKEKLKLTFAFEKAIKATVTEKDIKDHYKPKLQVSHILVK------------- 143 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G+ + +F++ K Sbjct: 144 ---DEKTAKEIKEKLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 200 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + DK++L K + + +I+ + + + L Sbjct: 201 EVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRDLLK 260 Query: 311 NAIIH 315 NA I Sbjct: 261 NADIK 265 >gi|228901403|ref|ZP_04065591.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 4222] gi|228858227|gb|EEN02699.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 4222] Length = 303 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 85/305 (27%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 L V+ + +S + S I TT +G I++ D +K++ K Sbjct: 24 LKRKKLVIGSILMGMTLSLSACGSSDTIVTTKSGS-ISESDFNKKLK--------ENYGK 74 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E D Sbjct: 75 QNLSEMVVEKVLDDKYKVTDEEVT---------------KQLKELKDKMGDNFNTYMESN 119 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + V L++ Sbjct: 120 GVKNEDQLKEKLKLTFAFEKAIKATVTEKDFKDHYKPKLQVSHILVK------------- 166 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G+ + +F++ K Sbjct: 167 ---DEKTAKEIKEKLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 223 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + DK++L K + + +I+ + + + L Sbjct: 224 EVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRDLLK 283 Query: 311 NAIIH 315 NA I Sbjct: 284 NADIK 288 >gi|167562430|ref|ZP_02355346.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia oklahomensis EO147] gi|167569612|ref|ZP_02362486.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia oklahomensis C6786] Length = 259 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 80/278 (28%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I IA L Q +LE+ QEL+ + QE K GI + Sbjct: 25 IAVVNGTPIPKSRADAMIAQLVQQGQQDTPQLEQAVRQELVNREILMQEAIKRGIPNRPD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q+ + DF+ K + Sbjct: 85 VKAQIV-------------------------------VAQQTAVLRALIEDFLKKNQPSD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A + + +++ KD K + + Sbjct: 114 AELKARYDDLVKSAAGREYHLHHILVDN----------EQQAKDLIAKIKGGAKFEDLAK 163 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277 +++ + G + P+F ++ + T+ P TQ G I + D R Sbjct: 164 QYSKDPGSAKNGGDLDWSDPKAYVPEFAAAAQQLQKGQMTDAPVKTQFGWHIIRVDDIRS 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + Q +++ + + LR A + Sbjct: 224 ITP--PPFEQVKQQIAQQMVQQKLQAFEEGLRQQAKVQ 259 >gi|285017392|ref|YP_003375103.1| peptidylprolyl isomerase (rotamase d) protein [Xanthomonas albilineans GPE PC73] gi|283472610|emb|CBA15115.1| probable peptidylprolyl isomerase (rotamase d) protein [Xanthomonas albilineans] Length = 661 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 26/250 (10%), Positives = 68/250 (27%), Gaps = 13/250 (5%) Query: 70 GELEKIAVQELIVETLKKQ--EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 +L + A+Q+ ++ T + K + D + D Q Sbjct: 172 QQLVRDALQQSVIPTGLMESAFGSKQETERLMKMLGETRDVELAMLPEMPADTAPVSDAQ 231 Query: 128 GIGDNHFKQYLAIQ-----SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLI 180 Q + ++ E + ++ K + L Sbjct: 232 VQQWYDTHTSDFKQPETVSIEYVELNAAKLPASKPADEATLRKRYEEEKARFVEPDQRLA 291 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 +L S + + K +K A E++ + + G ++ + Sbjct: 292 SHILISAGKDAASQKAAEAKAVKLAAEAKRPGADFAALARANSDDPGSKNAGGDLGWVEK 351 Query: 240 SDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 + F++ P ++ G I + + + G+ + Q +++ Sbjct: 352 GVMVKPFEDALFAMKPGEIVGPVKSEFGYHVIQLREVKGGKGKS--FEQVRDQLASEQLQ 409 Query: 299 KHEAEYVKKL 308 + + L Sbjct: 410 ADNEKALSAL 419 Score = 40.0 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 19/255 (7%), Positives = 57/255 (22%), Gaps = 35/255 (13%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-------------- 46 M + S +I ++I F V Y ++ + Sbjct: 1 MLQTLREKTSGWIATAIIGLLMIPFLFVIDTGYLGGVGANN-VAKVQAPPSWWLSAPSWW 59 Query: 47 ------NGEVITDGDISKRI-------------ALLKLQKINGELEKIAVQELIVETLKK 87 I+ A + + + ++ + +LI E + K Sbjct: 60 PVSLLWQHHEISTEQFRMGFEQARQQARQQQGEAFDPREFESIDNKRKVLDQLIDEQVVK 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E++G+ +V + D + G + Q + + Sbjct: 120 LAAEQAGVVIGDASVRDYIASIPAFQNNGKFDPERYRLALASGTPPRTPAMFQQLVRDAL 179 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 ++ +++ + + + + + Sbjct: 180 QQSVIPTGLMESAFGSKQETERLMKMLGETRDVELA-MLPEMPADTAPVSDAQVQQWYDT 238 Query: 208 SRLRLPKDCNKLEKF 222 + ++ Sbjct: 239 HTSDFKQPETVSIEY 253 >gi|228919984|ref|ZP_04083338.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839697|gb|EEM84984.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 285 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 28/304 (9%), Positives = 77/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT + K++ K Sbjct: 4 KHIFIITALISILMLSACEQKNGSATVATATDSTITKDNFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + + + + F ++ Sbjct: 56 LYEMMAQDVITKKYKVPDEEVNKEVE-----------KVKKQYGDQFKKVLENNGLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DYKNQIKFKLAMNEAIKKSITEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ + ++ + + G Y + P+F+ K + Sbjct: 145 SDENEAKEIKSKLDAGASFEELAKQESQDLLSKDKGGDLGYFNSGTMAPEFETAAYKLNV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+DL +K + + + +++ A Sbjct: 205 GQISNPVKSSNGYHVIKLTDKKDLKPYDEVKNSIRKNLEEERTADPVFSKKLLQEELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|330878776|gb|EGH12925.1| periplasmic folding chaperone [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 627 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 63/194 (32%), Gaps = 6/194 (3%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 F + + ++ K+ F K + ++ A QK + + Sbjct: 215 KAHYDQHAKEFMSPEQVVLDYIELKKSSFFDKVTVKDEDLQAAYQKEIANLSEQRRAAHI 274 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 L N N + ++++ ++ + ++F+ G + + Sbjct: 275 LI--EVNDKLNDEQAKAKVEEIQQRLAKGESFAALAKEFSQDPGSSSKGGDLGFAGKGVY 332 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 P F+ L +++ + P T G I + + +LK LS +E+ Sbjct: 333 DPAFEEALYALNKDQVSQPVRTDFGWHLIKLLGVEAPSVPTFASLKEKLSNDLKSQLVEQ 392 Query: 300 HEAEYVKKLRSNAI 313 E K+L +A Sbjct: 393 KFVEVTKQLEDSAF 406 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 31/326 (9%), Positives = 80/326 (24%), Gaps = 32/326 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + I + + + + +NGE IT ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIIALMAFTGIEAMFTATSNKQNAAEVNGEDITQNELSQAV 60 Query: 61 -----------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 L + A++ LI L Q + +F ++ Sbjct: 61 DMQRRQLAQQLAQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGAGDARFSFSDAALD 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE-ME 162 +Q F Q+ Q + +++ + Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRMQF--RQMLGQEMLIGQVRAGVAGSAFVT 178 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + P V+ + + + + Sbjct: 179 DAQVDAFARLEKQTRDFASLTQPADPSAVKVTDDEVKAHYDQHAKEFMSPEQVVLDYIEL 238 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGE 281 + + + DL +Q N ++ I + DK + Sbjct: 239 KKSSFFDKV----TVKDEDLQAAYQK-------EIANLSEQRRAAHILIEVNDKLNDEQA 287 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKK 307 A + + + A+ + Sbjct: 288 KAKVEEIQQRLAKGESFAALAKEFSQ 313 >gi|289627508|ref|ZP_06460462.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649941|ref|ZP_06481284.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. aesculi str. 2250] gi|330868371|gb|EGH03080.1| periplasmic folding chaperone [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 627 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 64/194 (32%), Gaps = 6/194 (3%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 F + + ++ K+ F K + ++ A QK + + Sbjct: 215 KAHYDQHAKEFMSPEQVVLDYIELKKSSFFDKVQVKDEDLQAAYQKEIANLSEQRRAAHI 274 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 L N N + +I++ ++ + ++++ G Y + Sbjct: 275 LI--EVNDKLNDEQAKAKIEEIQQRLAKGEDFAALAKEYSQDPGSSSKGGDLGYAGKGVY 332 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 P F++ L +++ + P T G I + + +LK L+ +E+ Sbjct: 333 DPAFEDSLYALNKDQVSQPVRTDFGWHLIKLLGVEAPSVPTFASLKDKLTTDLKSQLVEQ 392 Query: 300 HEAEYVKKLRSNAI 313 E K+L +A Sbjct: 393 KFVEVTKQLEDSAF 406 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 28/327 (8%), Positives = 77/327 (23%), Gaps = 33/327 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + I + + + + +NGE I+ ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIIALMAFTGIEALFTATSNKQNAAEVNGEDISQNELSQAV 60 Query: 61 -----------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 L + A++ LI L Q + +F ++ Sbjct: 61 DMQRRQLAQQLAQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGATDAKFSFSDAALD 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE-ME 162 +Q F Q+ Q + +++ + Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRLQF--RQMLGQEMLIGQVRAGVAGSAFVT 178 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + L + V+ + + + + Sbjct: 179 DAQVDAFARLEKQTRDFASLTLPADTTAVKVTDDEVKAHYDQHAKEFMSPEQVVLDYIEL 238 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGE 281 + + + + + N ++ I + DK + Sbjct: 239 KKSS---------FFDKVQVKDEDLQAAYQK--EIANLSEQRRAAHILIEVNDKLNDEQA 287 Query: 282 IALKAYLSAQNTP-TKIEKHEAEYVKK 307 A + + EY + Sbjct: 288 KAKIEEIQQRLAKGEDFAALAKEYSQD 314 Score = 35.8 bits (80), Expect = 7.6, Method: Composition-based stats. Identities = 29/254 (11%), Positives = 66/254 (25%), Gaps = 9/254 (3%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 +L +L+ + + + DS + Q A++ GL + + F + G Sbjct: 378 KDKLTTDLKSQLVEQKFVEV----TKQLEDSAFESSDLSQPAQDLGLKVQTTAPFGREGG 433 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 G + + + + + + K + L Sbjct: 434 EGITANRAVIQAAFSPEVLEEGSNSNTLELDPETVVVVRSKEHLQPQQLPLESVASSIRT 493 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246 ++ K +A + LR K ++ + + + L F Sbjct: 494 QLVKEHATAAAKAKGEALLAGLRDGKIPLAAKQDGRDWKSMEAVTRSQEGVDPQVLQTLF 553 Query: 247 QNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAE 303 + + + + + KA ++ A Sbjct: 554 RMPKPDGKGKPEFASITAADGSFVIVRLNGVNQAAAPTDAEKAQYRRFLASRAGQQDFAA 613 Query: 304 YVKKLRSNAIIHYY 317 Y +L SNA I + Sbjct: 614 YRAQLESNAKIEKF 627 >gi|319792645|ref|YP_004154285.1| ppic-type peptidyL-prolyl cis-trans isomerase [Variovorax paradoxus EPS] gi|315595108|gb|ADU36174.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Variovorax paradoxus EPS] Length = 638 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 43/399 (10%), Positives = 105/399 (26%), Gaps = 101/399 (25%) Query: 5 VFTSLSDF--IKLLTTYFVLI-IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--R 59 +F + I ++ + ++I F + + Y+ + I G IT + R Sbjct: 1 MFDFFRKYNKIVMIFLFLLIIPSFVLFGVERYQGSGRDEK-VAHIEGGDITKPEWDAQHR 59 Query: 60 IALLKLQKINGE----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 I ++++ + L ++ ++ + + K+ +T + ++ F Q Sbjct: 60 IETDRIRQQSPNVDPTVLDSDALRYATLERMVRDRVLAAAAAKANMTVSEDRLSRIFAQD 119 Query: 110 ----ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-------------- 151 + T D +FL G ++ + V+ Sbjct: 120 PGLASFRTPDGKFDRETFLRVTGRTPEQYEAQVRADMSTQQVLLGVSGTALTPPALVAAT 179 Query: 152 -------------------FMLKYGNLEMEIPANKQKMKNITVREYL------------- 179 F K + +I A + + Sbjct: 180 VNAFYDRREIQVARFAPDGFASKVTVSDADIEAYYKDHTSQFQAPEQANIEYLVLDLDAA 239 Query: 180 ---------------------------IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 R I + +K AE+ + Sbjct: 240 KKNVVVNEADLKTYYEQNTARFGTKEERRASHILITAPASMSAADREKAKAKAEQLLAEV 299 Query: 213 PKDCNKLEKFASKI-----HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKG 266 K N A K G ++ + + F++ + + + T+ G Sbjct: 300 KKAPNTFADVARKNSQDPGSAEKGGDLDFVTKGAMVKPFEDAMFALKKGEISGVVETEFG 359 Query: 267 VEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAE 303 I + D + ++A + ++ + + A+ Sbjct: 360 YHIIHLVDIKPAVVPPFEQVRATIESEVRAAQAAQEFAK 398 >gi|299066735|emb|CBJ37929.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Ralstonia solanacearum CMR15] Length = 637 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 40/407 (9%), Positives = 99/407 (24%), Gaps = 106/407 (26%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI------------ 60 + L+ V F + Y + S + VIT ++ R+ Sbjct: 1 MFLVLLILVFPSFVFFGVQGYSRFMDGSHDAAKVGDTVITTSELDTRVREQTERLRQMLG 60 Query: 61 -ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-------HARN 112 Q ++ + + +I + + E ++ ++ + V Q + Sbjct: 61 AQYDPRQFEGPQMRRDVLDGIIQQRVMVNEASRANLSVADSKVRETIEQIPAVTQLRKPD 120 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------------------- 149 + + L QG+ + F + + + + + Sbjct: 121 GKFDTDAYIKLLAAQGMTPDQFDARVRSELVLQQIPQSIVSSAFVPKSLVDRLIEARDQQ 180 Query: 150 ----------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG--- 196 D+ + + I A + ++ + Q Sbjct: 181 REVQALLFKPADYAAEVTADDKAIQAYYDAHQQEFAVPEQVKAEYVVFSGEDMMKQIPVT 240 Query: 197 -FVQKRIKDAEESRLRLPKDCNKL------------------------------------ 219 K D +R + + Sbjct: 241 PEQLKEYYDQNAARFKTEEQRRAAHILIKLPDNAKPADKDAAKKRAEEVLAEVRKSPGSF 300 Query: 220 EKFASKIHDVSI-----GKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 + A K G+ +L + P F+N L K + ++ + G I + Sbjct: 301 AELAKKYSGDPGSAAQGGELGFLAKGATVPPFENALFALKQPGDISDVVESDFGFHIIKL 360 Query: 273 CDKRDLG------GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + G + L+ + Q K + + + + Sbjct: 361 EEVKGGGVQSLDAVKPELEREVRTQLANKKYTELADAFSNGVEDQSD 407 >gi|257483811|ref|ZP_05637852.1| peptidyl-prolyl cis-trans isomerase D, putative [Pseudomonas syringae pv. tabaci ATCC 11528] gi|320327650|gb|EFW83658.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. glycinea str. race 4] gi|330985643|gb|EGH83746.1| periplasmic folding chaperone [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012683|gb|EGH92739.1| periplasmic folding chaperone [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 627 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 64/194 (32%), Gaps = 6/194 (3%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 F + + ++ K+ F K + ++ A QK + + Sbjct: 215 KAHYDQHAKEFMSPEQVVLDYIELKKSSFFDKVQVKDEDLQAAYQKEIANLSEQRRAAHI 274 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 L N N + +I++ ++ + ++++ G Y + Sbjct: 275 LI--EVNDKLNDEQAKAKIEEIQQRLAKGEDFAALAKEYSQDPGSSSKGGDLGYAGKGVY 332 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 P F++ L +++ + P T G I + + +LK L+ +E+ Sbjct: 333 DPAFEDTLYALNKDQVSQPVRTDFGWHLIKLLGVEAPSVPTFASLKDKLTTDLKSQLVEQ 392 Query: 300 HEAEYVKKLRSNAI 313 E K+L +A Sbjct: 393 KFVEVTKQLEDSAF 406 Score = 55.8 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 28/327 (8%), Positives = 78/327 (23%), Gaps = 33/327 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + I + + + + +NGE I+ ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIIALMAFTGIEALFTATSNKQNAAEVNGEDISQNELSQAV 60 Query: 61 ALL-----------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + L + A++ LI L Q + +F ++ Sbjct: 61 DMQRRQLAQQLAQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGATDAKFSFSDAALD 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE-ME 162 +Q F Q+ Q + +++ + Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRLQF--RQMLGQEMLIGQVRAGVAGSAFVT 178 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + L + V+ + + + + Sbjct: 179 DAQVDAFARLEKQTRDFASLTLPADTTAVKVTDDEVKAHYDQHAKEFMSPEQVVLDYIEL 238 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGE 281 + + + + + N ++ I + DK + Sbjct: 239 KKSS---------FFDKVQVKDEDLQAAYQK--EIANLSEQRRAAHILIEVNDKLNDEQA 287 Query: 282 IALKAYLSAQNTP-TKIEKHEAEYVKK 307 A + + EY + Sbjct: 288 KAKIEEIQQRLAKGEDFAALAKEYSQD 314 Score = 36.2 bits (81), Expect = 6.2, Method: Composition-based stats. Identities = 28/254 (11%), Positives = 65/254 (25%), Gaps = 9/254 (3%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 +L +L+ + + + DS + Q A++ GL + + F + G Sbjct: 378 KDKLTTDLKSQLVEQKFVEV----TKQLEDSAFESSDLSQPAQDLGLKVQTTAPFGREGG 433 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 G + + + + + + K + L Sbjct: 434 EGITANRAVIQAAFSPEVLEEGSNSNTLELDPETVVVVRSKEHLQPQQLPLESVASSIRT 493 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246 ++ K +A + LR K ++ + + + L F Sbjct: 494 QLVKEHATAAAKAKGEALLAGLRDGKIPLAAKQDGRDWKSMEAVTRSQEGVDPQVLQTLF 553 Query: 247 QNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAE 303 + + + + + KA ++ A Sbjct: 554 RMPKPDGKGKPEFASITAADGSFVIVRLNGVNQAAAPTDAEKAQYRRFLASRAGQQDFAA 613 Query: 304 YVKKLRSNAIIHYY 317 Y +L S A I + Sbjct: 614 YRAQLESKAKIEKF 627 >gi|228957536|ref|ZP_04119288.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802128|gb|EEM48993.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 285 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 27/304 (8%), Positives = 76/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT + K++ K Sbjct: 4 KHIFIITALISILMLSACGQKNGSATVATATDSTITKDNFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + + + + F ++ Sbjct: 56 LYEMMAQDVITKKYKVPDEEVNKEVE-----------KVKKQYGDQFKKVLENYGLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSITEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ + ++ + + G Y + P+F+ K + Sbjct: 145 SDENEAKEIKSKLDAGASFEELAKQESQDLLSKDKGGDLGYFNSGTMAPEFETAAYKLNV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+ L +K + + + +++ A Sbjct: 205 GQISNPVKSSNGYHVIKLTDKKALKPYDEVKDSIRKNLEEERTADPVFSKKLLQEELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|213968838|ref|ZP_03396979.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas syringae pv. tomato T1] gi|301384116|ref|ZP_07232534.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. tomato Max13] gi|302059522|ref|ZP_07251063.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. tomato K40] gi|302135027|ref|ZP_07261017.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926441|gb|EEB59995.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas syringae pv. tomato T1] Length = 627 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 63/194 (32%), Gaps = 6/194 (3%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 F + + ++ K+ F K + ++ A QK + + Sbjct: 215 KAHYDQHAKEFMSPEQVVLDYIELKKSSFFDKVTVKDEDLQAAYQKEIANLSEQRRAAHI 274 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 L N N + ++++ ++ + ++F+ G + + Sbjct: 275 LI--EVNDKLNDDQAKAKVEEIQQRLAKGEDFAALAKEFSQDPGSSSKGGDLGFAGKGVY 332 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 P F+ L +++ + P T G I + + +LK LS +E+ Sbjct: 333 DPAFEEALYALNKDQVSQPVRTDFGWHLIKLLGVEAPSVPTFASLKEKLSNDLKSQLVEQ 392 Query: 300 HEAEYVKKLRSNAI 313 E K+L +A Sbjct: 393 KFVEVTKQLEDSAF 406 Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 32/326 (9%), Positives = 82/326 (25%), Gaps = 32/326 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + I + + + + +NGE IT ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIIALMAFTGIEAMFTATSNKQNAAEVNGEDITQNELSQAV 60 Query: 61 ALL-----------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + L + A++ LI L Q + +F ++ Sbjct: 61 DMQRRQLAQQLAQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGAGDARFSFSDAALD 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE-ME 162 +Q F Q+ Q + +++ + Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRMQF--RQMLGQEMLIGQVRAGVAGSAFVT 178 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + L + P V+ + + + + Sbjct: 179 DAQVDAFARLEKQTRDFASLTLPADPSAVKVTDDEVKAHYDQHAKEFMSPEQVVLDYIEL 238 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGE 281 + + + DL +Q N ++ I + DK + Sbjct: 239 KKSSFFDKV----TVKDEDLQAAYQK-------EIANLSEQRRAAHILIEVNDKLNDDQA 287 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKK 307 A + + + A+ + Sbjct: 288 KAKVEEIQQRLAKGEDFAALAKEFSQ 313 Score = 35.4 bits (79), Expect = 9.9, Method: Composition-based stats. Identities = 28/254 (11%), Positives = 67/254 (26%), Gaps = 9/254 (3%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 +L +L+ + + + DS + Q A++ GL + + F + G Sbjct: 378 KEKLSNDLKSQLVEQKFVEV----TKQLEDSAFESSDLTQPAQDLGLKVQTTAPFGREGG 433 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 G + + + + + + K + L Sbjct: 434 EGLTANRAVIQAAFSPEVLEEGSNSNTLELDPETVLVVRSKEHLQPQQLPLESVASSIRA 493 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246 ++ K +A + LR K ++ + + + L F Sbjct: 494 QLVKEHATAAAKTKGEALLAGLRDGKIPLAAKQDGRDWKSMEAVSRSQEGVDPQVLQALF 553 Query: 247 QNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAE 303 + +++ + + + KA ++ A Sbjct: 554 RMPKPVAKDKPEFASITAADGSFVIVRLNGVNQAAAPTDAEKAQYRRFLASRAGQQDFAA 613 Query: 304 YVKKLRSNAIIHYY 317 Y +L S A I + Sbjct: 614 YRAQLESKAKIEKF 627 >gi|52079482|ref|YP_078273.1| molecular chaperone PrsA [Bacillus licheniformis ATCC 14580] gi|52784844|ref|YP_090673.1| hypothetical protein BLi01072 [Bacillus licheniformis ATCC 14580] gi|319646731|ref|ZP_08000960.1| PrsA protein [Bacillus sp. BT1B_CT2] gi|52002693|gb|AAU22635.1| molecular chaperone PrsA [Bacillus licheniformis ATCC 14580] gi|52347346|gb|AAU39980.1| PrsA [Bacillus licheniformis ATCC 14580] gi|317391319|gb|EFV72117.1| PrsA protein [Bacillus sp. BT1B_CT2] Length = 286 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 31/304 (10%), Positives = 80/304 (26%), Gaps = 43/304 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + I + S + IT D+ + + Sbjct: 1 MKKIAIAAITATSVLALSACSGGDSEVVAETKAGNITKEDLYQTLK--------DNAGAD 52 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A+ L+ + + + + S D Y + L + F+ Sbjct: 53 ALNMLVQQKVLDDKYDVSDKEIDKKLNEYKKSMGDQLNQLIDQKGEDFV----------- 101 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 Q + +++ + ++ +K + Sbjct: 102 ---KEQIKYELLMQKAAKDNIKVTDDDVKEYYDGLKGK---------------IHLSHIL 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD--LHPQFQNLLKKS 253 +K ++ E+ + K + +++++ G ++ + D + Sbjct: 144 VKEKKTAEEVEKKLKKGEKFEDLAKEYSTDGTAEKGGDLGWVGKDDNMDKDFVKAAFALK 203 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSN 311 + P +Q G I ++R G +K L + K + KL + Sbjct: 204 TGEISGPVKSQFGYHIIKKDEER--GKYEDMKKELKKEVQEQKQNDQTELQSVIDKLVKD 261 Query: 312 AIIH 315 A + Sbjct: 262 ADLK 265 >gi|163755249|ref|ZP_02162369.1| putative exported peptidyl-prolyl cis-trans isomerase [Kordia algicida OT-1] gi|161324669|gb|EDP95998.1| putative exported peptidyl-prolyl cis-trans isomerase [Kordia algicida OT-1] Length = 491 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 87/291 (29%), Gaps = 13/291 (4%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQE 89 S + + +I D DI K + L+ Q + G + + +L+ + L + Sbjct: 62 STTKRVKIDGVAAVVGDFIILDSDIDKTLLDLRQQGVSLEGLTKCKLLGKLMEDKLYAHQ 121 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV-- 147 + I + Q L + D + + Sbjct: 122 AIQDSIEVSPGEIRDRVNQSIEYFSQQIGGMDKLLKFYAMEDEAALRKRLTEITKVQFLT 181 Query: 148 --VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 +++ + E+ +K+ + + I ++ V K I+ Sbjct: 182 QRMQSKVVRDVEITPEEVRQFFEKIPADQRPRIGVELEVSQIIIEPEPSKEAVDKVIQKL 241 Query: 206 EESRLR---LPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260 ++ + K ++ G L +F+++ Q ++P Sbjct: 242 KDIKAEVEGGSSFGTKAILYSKDRASGRQGGLMPINKRQSLAKEFKDVAFSLQQGEISDP 301 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + T G + + R ++ + + T ++E+ E + LR+ Sbjct: 302 FETDFGWHIVMVEKVRGQERDVRHILLI-PEVTADRLEEARKE-IDTLRTR 350 >gi|298486267|ref|ZP_07004330.1| Peptidyl-prolyl cis-trans isomerase ppiD [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159274|gb|EFI00332.1| Peptidyl-prolyl cis-trans isomerase ppiD [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 627 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 64/194 (32%), Gaps = 6/194 (3%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 F + + ++ K+ F K + ++ A QK + + Sbjct: 215 KAHYDQHAKEFMSPEQVVLDYIELKKSSFFDKVQVKDEDLQAAYQKEIANLSEQRRAAHI 274 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 L N N + +I++ ++ + ++++ G Y + Sbjct: 275 LI--EVNDKLNDEQAKAKIEEIQQRLAKGEDFAALAKEYSQDPGSSSKGGDLGYAGKGVY 332 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 P F++ L +++ + P T G I + + +LK L+ +E+ Sbjct: 333 DPAFEDTLYALNKDQVSQPVRTDFGWHLIKLLGVEAPSVPTFASLKDKLTTDLKSQLVEQ 392 Query: 300 HEAEYVKKLRSNAI 313 E K+L +A Sbjct: 393 KFVEVTKQLEDSAF 406 Score = 55.5 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 28/327 (8%), Positives = 78/327 (23%), Gaps = 33/327 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + I + + + + +NGE I+ ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIIALMAFTGIEALFTATSNKQNAAEVNGEDISQNELSQAV 60 Query: 61 ALL-----------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + L + A++ LI L Q + +F ++ Sbjct: 61 DMQRRQLAQQLAQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGATDAKFSFSDAALD 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE-ME 162 +Q F Q+ Q + +++ + Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRLQF--RQMLGQEMLIGQVRAGVAGSAFVT 178 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + L + V+ + + + + Sbjct: 179 DAQVDAFARLEKQTRDFASLTLPADTTAVKVTDDEVKAHYDQHAKEFMSPEQVVLDYIEL 238 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGE 281 + + + + + N ++ I + DK + Sbjct: 239 KKSS---------FFDKVQVKDEDLQAAYQK--EIANLSEQRRAAHILIEVNDKLNDEQA 287 Query: 282 IALKAYLSAQNTP-TKIEKHEAEYVKK 307 A + + EY + Sbjct: 288 KAKIEEIQQRLAKGEDFAALAKEYSQD 314 Score = 36.6 bits (82), Expect = 5.3, Method: Composition-based stats. Identities = 28/254 (11%), Positives = 66/254 (25%), Gaps = 9/254 (3%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 +L +L+ + + + DS + Q A++ G+ + + F + G Sbjct: 378 KDKLTTDLKSQLVEQKFVEV----TKQLEDSAFESSDLSQPAQDLGMKVQTTAPFGREGG 433 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 G + + + + + + K + L Sbjct: 434 EGITANRAVIQAAFSPEVLEEGSNSNTLELDPETVVVVRSKEHLQPQQLPLESVASSIRT 493 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246 ++ K +A + LR K ++ + + + L F Sbjct: 494 QLVKEHATAAAKAKGEALLAGLRDGKIPLAAKQDGRDWKSMEAVTRSQEGVDPQVLQTLF 553 Query: 247 QNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAE 303 + + + + + KA ++ A Sbjct: 554 RMPKPDGKGKPEFASITAADGSFVIVRLNGVNQAAAPTDAEKAQYRRFLASRAGQQDFAA 613 Query: 304 YVKKLRSNAIIHYY 317 Y +L SNA I + Sbjct: 614 YRAQLESNAKIEKF 627 >gi|304405785|ref|ZP_07387443.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus curdlanolyticus YK9] gi|304345028|gb|EFM10864.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus curdlanolyticus YK9] Length = 320 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 26/287 (9%), Positives = 76/287 (26%), Gaps = 34/287 (11%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98 ++ I G+ IT+ D++K L + ++ + + ++ Sbjct: 53 EGKVLAIIGGKPITEQDLTKE------------LHRQYGASMLRTMMLHEAVKLEAAAQG 100 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 T + + ++ ++ + + + +++ Sbjct: 101 LTVTAEQLSAELARTMEGYGSEAEYYEEMQEQLGLSREDVQADAEYRLLLEQIATRAITV 160 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + +I + + ++ N D E Sbjct: 161 TDDQIDEYLAEHASEFTGVTELKLRWILTGTRSDAN---------DVIEKLSDGEDFALM 211 Query: 219 LEKFASKI-HDVSIGKAQYLLESDL---HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274 + ++ G Y+ ++D T P T+ G I + + Sbjct: 212 AKTYSIDAFTSEQGGDLGYIEDNDPLVEAALLDATHSLDVGQVTGPVKTEGGYAIIRLDE 271 Query: 275 KRDLGGEI--ALKAYLSAQNTPTKI-------EKHEAEYVKKLRSNA 312 +R+ G + Q + + ++ +Y + R+ A Sbjct: 272 RREREGMALGQRREEARRQVSLEQARPLPEVEDELLRKYGEDKRNPA 318 >gi|257066380|ref|YP_003152636.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaerococcus prevotii DSM 20548] gi|256798260|gb|ACV28915.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaerococcus prevotii DSM 20548] Length = 249 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 33/287 (11%), Positives = 89/287 (31%), Gaps = 45/287 (15%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKS 93 ++++ +NG+ I D+ + + + + + + E KI E+I + + ++ Sbjct: 2 TEDNNKLLAEVNGKKIYTSDVYQLMNSIEDRERFNSEEGIKILADEMINQEILLKDAYDE 61 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 G+ D V + A Sbjct: 62 GLDQDEEFVKELDLVKTNMLKNYAMH-------------------------------KIF 90 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + + EI ++ K +L+ +++ +K + E + Sbjct: 91 EEVNINDDEIKKYYEENKETINPP-----ILYEASHILVKDLETAEKVRGEIE----KGL 141 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAI 272 + +K++ + G + + +FQ + P +Q G I + Sbjct: 142 SFEDAAKKYSIDPSKENGGSLGKFPKGVMVKEFQEGLDAIEVGEISAPVKSQFGYHLIKL 201 Query: 273 CDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 +K + +K+ + + K ++ E + K++ + + Y Sbjct: 202 TNKENVETPKFEEIKSQVGQRLIMAKRQEAYLEKLGKIKKDVEVKKY 248 >gi|229102919|ref|ZP_04233612.1| Foldase protein prsA 1 [Bacillus cereus Rock3-28] gi|228680505|gb|EEL34689.1| Foldase protein prsA 1 [Bacillus cereus Rock3-28] Length = 293 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 30/318 (9%), Positives = 88/318 (27%), Gaps = 48/318 (15%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALL 63 + + S+ +L L +++ + S + T + +T+ ++SK + Sbjct: 1 MHNNKSEVFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--VTEKELSKELK-- 56 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 + + + ++++ + + S + + Sbjct: 57 ------QKYGESTLYQMVLSKALLDKYKVSDEEVTKQVKE-------AKDKMGDNFKETL 103 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 ++ K+ + + + +K K + + Sbjct: 104 EKIGLKNEDELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD--------- 154 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 +K K+ +E ++++ G+ Sbjct: 155 ---------------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEIAGFGPGQT 199 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 +F+ K + + P T G I + DK++L +K + +++ Sbjct: 200 VKEFEEAAYKLNAGQVSEPVKTSYGYHIIKVTDKKELKPFEEVKDKIRKDLEQQRLQDTT 259 Query: 302 AEY----VKKLRSNAIIH 315 ++ V L +A I Sbjct: 260 GKWKQQVVNDLLKDADIK 277 >gi|28870877|ref|NP_793496.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas syringae pv. tomato str. DC3000] gi|28854126|gb|AAO57191.1| peptidyl-prolyl cis-trans isomerase D, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|331019234|gb|EGH99290.1| periplasmic folding chaperone [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 627 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 63/194 (32%), Gaps = 6/194 (3%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 F + + ++ K+ F K + ++ A QK + + Sbjct: 215 KAHYDQHAKEFMSPEQVVLDYIELKKSSFFDKVTVKDEDLQAAYQKEIANLSEQRRAAHI 274 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 L N N + ++++ ++ + ++F+ G + + Sbjct: 275 LI--EVNDKLNDDQAKAKVEEIQQRLAKGEDFAALAKEFSQDPGSSSKGGDLGFAGKGVY 332 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 P F+ L +++ + P T G I + + +LK LS +E+ Sbjct: 333 DPAFEEALYALNKDQVSQPVRTDFGWHLIKLLGVEAPSVPTFASLKEKLSNDLKSQLVEQ 392 Query: 300 HEAEYVKKLRSNAI 313 E K+L +A Sbjct: 393 KFVEVTKQLEDSAF 406 Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 32/326 (9%), Positives = 82/326 (25%), Gaps = 32/326 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + I + + + + +NGE IT ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIIALMAFTGIEAMFTATSNKQNAAEVNGEDITQNELSQAV 60 Query: 61 ALL-----------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + L + A++ LI L Q + +F ++ Sbjct: 61 DMQRRQLAQQLAQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGAGDARFSFSDAALD 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE-ME 162 +Q F Q+ Q + +++ + Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRMQF--RQMLGQEMLIGQVRAGVAGSAFVT 178 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + L + P V+ + + + + Sbjct: 179 DAQVDAFARLEKQTRDFASLTLPADPSAVKVTDDEVKAHYDQHAKEFMSPEQVVLDYIEL 238 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGE 281 + + + DL +Q N ++ I + DK + Sbjct: 239 KKSSFFDKV----TVKDEDLQAAYQK-------EIANLSEQRRAAHILIEVNDKLNDDQA 287 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKK 307 A + + + A+ + Sbjct: 288 KAKVEEIQQRLAKGEDFAALAKEFSQ 313 >gi|295688302|ref|YP_003591995.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caulobacter segnis ATCC 21756] gi|295430205|gb|ADG09377.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caulobacter segnis ATCC 21756] Length = 329 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 31/291 (10%), Positives = 72/291 (24%), Gaps = 55/291 (18%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE------KIAVQELIVETLKKQ 88 +NG+VI D+ + L L+ + + E+I + L Sbjct: 43 PPEPGDTAVARVNGQVIWASDVKREAVAQGLISEGEPLDISSEVFRQRLDEVIDQKLLAA 102 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 E K I D + + +V Sbjct: 103 EAMKRKIDKDPMAQRRL------------------------------AAARERILGDMLV 132 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + +Q+ + E R ++ ++ Sbjct: 133 EGVVEKAVTEDAIRKLYAEQQKLSKRSEEIRARQIIVGSQAEAES-----------VKKL 181 Query: 209 RLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKG 266 + ++ + G Y + + + P+ + G Sbjct: 182 LATGASFDALAMERSTDQATRFNGGDLGYFTLDVMPEPYGVALKDAQKGALVGPFAAEGG 241 Query: 267 VEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + DKR + A + + T + + ++KLR +A + Sbjct: 242 WVLVRVEDKRVEEPITLEAARPQIVRFLTYDQ----VRDILEKLRGSAKVE 288 >gi|206968099|ref|ZP_03229055.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus AH1134] gi|229177678|ref|ZP_04305055.1| Foldase protein prsA 2 [Bacillus cereus 172560W] gi|206737019|gb|EDZ54166.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus AH1134] gi|228605868|gb|EEK63312.1| Foldase protein prsA 2 [Bacillus cereus 172560W] Length = 285 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 28/304 (9%), Positives = 77/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT + K++ K Sbjct: 4 KHIFIITALISILMLSACEQKNGSATVATATDSTITKDNFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + + + + F ++ Sbjct: 56 LYEMMAQDVITKKYKVPDEEVNKEVE-----------KVKKQYGDQFKKVLENNGLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSITEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ + ++ + + G Y + P+F+ K + Sbjct: 145 SDENEAKEIKSKLDAGASFEELAKQESQDLLSKDKGGDLGYFNSGTMAPEFETAAYKLNV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+DL +K + + + +++ A Sbjct: 205 GQISNPVKSSNGYHVIKLTDKKDLKPYDEVKNSIRKNLEEERTADPVFSKKLLQEELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|119896837|ref|YP_932050.1| peptidylprolyl isomerase [Azoarcus sp. BH72] gi|119669250|emb|CAL93163.1| probable peptidylprolyl isomerase [Azoarcus sp. BH72] Length = 285 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 45/162 (27%), Gaps = 5/162 (3%) Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ--KRIKDAEESRLRL 212 E EI + +R +L +I D N+ V + + + + Sbjct: 115 SVDETEAEIFYYAHVDRFRAPERRTVRHILVTINDAYPDNRREVASRRIHEICKRLNNKP 174 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIA 271 + + K + ++ G L L L + + ++ G + Sbjct: 175 ERFEEQAMKHSECPTALNGGLLGELPRGTLYPELDAVLFEMKAGQLSGVVESEIGFHLLR 234 Query: 272 ICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + L Q T + K ++ +L Sbjct: 235 CDAIQPERVLSFAEVSESLRQQLTAERGRKDARRWLTELLKR 276 >gi|71737764|ref|YP_273939.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558317|gb|AAZ37528.1| peptidyl-prolyl cis-trans isomerase D, putative [Pseudomonas syringae pv. phaseolicola 1448A] Length = 627 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 64/194 (32%), Gaps = 6/194 (3%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 F + + ++ K+ F K + ++ A QK + + Sbjct: 215 KAHYDQHAKEFMSPEQVVLDYIELKKSSFFDKVQVKDEDLQAAYQKEIANLSEQRRAAHI 274 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 L N N + +I++ ++ + ++++ G Y + Sbjct: 275 LI--EVNDKLNDEQAKAKIEEIQQRLAKGEDFAALAKEYSQDPGSSSKGGDLGYAGKGVY 332 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 P F++ L +++ + P T G I + + +LK L+ +E+ Sbjct: 333 DPAFEDTLYALNKDQVSQPVRTDFGWHLIKLLGVEAPSVPTFASLKDKLTTDLKSQLVEQ 392 Query: 300 HEAEYVKKLRSNAI 313 E K+L +A Sbjct: 393 KFVEVTKQLEDSAF 406 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 28/327 (8%), Positives = 78/327 (23%), Gaps = 33/327 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + I + + + + +NGE I+ ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIIALMAFTGIEALFTATSNKQNAAEVNGEDISQNELSQAV 60 Query: 61 ALL-----------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + L + A++ LI L Q + +F ++ Sbjct: 61 DMQRRQLAQQLAQQLGKDFDSAMLDEKLLRESALKGLIDRKLLLQGATDAKFSFSDAALD 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE-ME 162 +Q F Q+ Q + +++ + Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRLQF--RQMLGQEMLIGQVRAGVAGSAFVT 178 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + L + V+ + + + + Sbjct: 179 DAQVDAFARLEKQTRDFASLTLPADTTAVKVTDDEVKAHYDQHAKEFMSPEQVVLDYIEL 238 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGE 281 + + + + + N ++ I + DK + Sbjct: 239 KKSS---------FFDKVQVKDEDLQAAYQK--EIANLSEQRRAAHILIEVNDKLNDEQA 287 Query: 282 IALKAYLSAQNTP-TKIEKHEAEYVKK 307 A + + EY + Sbjct: 288 KAKIEEIQQRLAKGEDFAALAKEYSQD 314 Score = 36.2 bits (81), Expect = 6.7, Method: Composition-based stats. Identities = 28/254 (11%), Positives = 65/254 (25%), Gaps = 9/254 (3%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 +L +L+ + + + DS + Q A++ GL + + F + G Sbjct: 378 KDKLTTDLKSQLVEQKFVEV----TKQLEDSAFESSDLSQPAQDLGLKVQTTAPFGREGG 433 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 G + + + + + + K + L Sbjct: 434 EGITANRAVIQAAFSPEVLEEGSNSNTLELDPETVVVVRSKEHLQPQQLPLESVASSIRT 493 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246 ++ K +A + LR K ++ + + + L F Sbjct: 494 QLVKEHATAAAKAKGEALLAGLRDGKIPLAAKQDGRDWKSMEAVTRSQEGVDPQVLQTLF 553 Query: 247 QNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAE 303 + + + + + KA ++ A Sbjct: 554 RMPKPDGKGKPEFASITAADGSFVIVRLNGVNQAAAPTDAEKAQYRRFLASRAGQQDFAA 613 Query: 304 YVKKLRSNAIIHYY 317 Y +L S A I + Sbjct: 614 YRAQLESKAKIEKF 627 >gi|86150833|ref|ZP_01069049.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 260.94] gi|315124743|ref|YP_004066747.1| hypothetical protein ICDCCJ07001_1237 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85842003|gb|EAQ59249.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 260.94] gi|315018465|gb|ADT66558.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 271 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 78/296 (26%), Gaps = 32/296 (10%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 I+ S S + I ++ E IT DI + + LK+ A+ LI Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKALKID------RNKALGVLIN 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E ++ ++++ GI + ++ + + F + L + F+ Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRANFKKDL 117 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + + + + Y + +N + + Sbjct: 118 EKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANIYLSNNPQTLENIKNTKK 177 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 + L + L + + Sbjct: 178 TILKPQNASLN------------------------TSNADPRLLGLLSQIPVGGFSPVLN 213 Query: 263 TQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G E + K +K + + + +Y KLRS I Y Sbjct: 214 GKNGYELYEVKSKDGAQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 269 >gi|86149973|ref|ZP_01068201.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|148926278|ref|ZP_01809963.1| possible periplasmic protein [Campylobacter jejuni subsp. jejuni CG8486] gi|205356305|ref|ZP_03223071.1| possible periplasmic protein [Campylobacter jejuni subsp. jejuni CG8421] gi|85839419|gb|EAQ56680.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|145845449|gb|EDK22542.1| possible periplasmic protein [Campylobacter jejuni subsp. jejuni CG8486] gi|205345910|gb|EDZ32547.1| possible periplasmic protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 271 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 34/296 (11%), Positives = 78/296 (26%), Gaps = 32/296 (10%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 I+ S S + I ++ E IT DI + + LK+ A+ LI Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKALKID------RNKALGVLIN 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E ++ ++++ GI + ++ + + F + L + F+ Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRANFKKDL 117 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + + + + Y + +N + + Sbjct: 118 EKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANIYLSNNPQTLENIKNTKK 177 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 + L + L + + Sbjct: 178 TILKPQNASLN------------------------TSNADPRLLGLLSQIPVGGFSPVLN 213 Query: 263 TQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G E + + +K + + + +Y KLRS I Y Sbjct: 214 GKNGYELYEVKSRDGAQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 269 >gi|237749474|ref|ZP_04579954.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oxalobacter formigenes OXCC13] gi|229380836|gb|EEO30927.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oxalobacter formigenes OXCC13] Length = 256 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 82/300 (27%), Gaps = 49/300 (16%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQ 78 +++ + VS+ ++A + +NG+ I + + + Q EL Sbjct: 1 MVLSTLSLSFVSFAAFAQN---VAVVNGKAIPSSYSDEAVKEVVKQGGKDTPELRNNIKT 57 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 +LIV + QE EK + + Sbjct: 58 QLIVGEVLLQEAEKQNLASTDAVKKQ------------------------------MEMA 87 Query: 139 AIQSIWPDVVKNDFMLK-YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 + + N + E++ ++ EY ++ +L Sbjct: 88 RRSILIDTLRNNYVTKNPVSDNEVKAEYDRLVKMQKGQTEYHVKHILVKDKATADSIIKQ 147 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256 V K E+ EK K G + DL F + + + Sbjct: 148 VSKNPASFEKLAQ---------EKSLDKASAARGGDMGWATAGDLVKPFSDAMVSLKKGQ 198 Query: 257 TTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P T+ G I + D +I + + + + EY L A I Sbjct: 199 VSKTPVQTEFGYHIIKVVD--SQKVKIPTYEQIKPKLKASMQYRKWQEYEMGLMKEAKIQ 256 >gi|229115799|ref|ZP_04245201.1| Foldase protein prsA 1 [Bacillus cereus Rock1-3] gi|228667682|gb|EEL23122.1| Foldase protein prsA 1 [Bacillus cereus Rock1-3] Length = 293 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 29/318 (9%), Positives = 87/318 (27%), Gaps = 48/318 (15%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALL 63 + + S+ +L L +++ + S + T + +T+ ++SK + Sbjct: 1 MHNNKSEVFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--VTEKELSKELK-- 56 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 + + + ++++ + + + + Sbjct: 57 ------QKYGESTLYQMVLSKALLDKY-------KVSDEEATKQVKEAKDKMGDNFKETL 103 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 ++ K+ + + + +K K + + Sbjct: 104 EKLGLKNEDELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD--------- 154 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 +K K+ +E ++++ G+ Sbjct: 155 ---------------EKTAKEVKEKVNNGEDFATLAKQYSEDTGSKEQGGEIAGFGPGQT 199 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 +F+ K + + P T G I + DK++L +K + +++ Sbjct: 200 VKEFEEAAYKLNAGQVSEPVKTSYGYHIIKVTDKKELKPFEEVKDKIRKDLEQQRLQDTT 259 Query: 302 AEY----VKKLRSNAIIH 315 ++ V L +A I Sbjct: 260 GKWKQQVVNDLLKDADIK 277 >gi|281421754|ref|ZP_06252753.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella copri DSM 18205] gi|281404249|gb|EFB34929.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella copri DSM 18205] Length = 484 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 29/288 (10%), Positives = 82/288 (28%), Gaps = 17/288 (5%) Query: 33 YKSWAMSSRIRTTINGEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLKKQEI 90 ++ + + E I D+ + A + K G+ + +++ V+ L + Sbjct: 52 INEGSVVDEVIWVVGDEAILKSDVEVTRLQAEAEGIKYTGDPDCSIPEQIAVQKLFLHQA 111 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK- 149 I + V + + + + +Q + +++ Sbjct: 112 AIDSIEVSESEVMNGIDEQINSWVSMIGSREKLEEYRKQSITQMRQQMHDDFKNQQLIQK 171 Query: 150 --NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + ++ + + ++ + + + + E Sbjct: 172 MKQELVKDIKVSPAQVRKYFKDLPADSIPFVPTEVEVEILTMQPRIPLEEINRVKNQLRE 231 Query: 208 SRLRLPKDCNKLEKFASKIHDVSI-----GKAQYLLESDLHPQFQNLLKKSQN--NTTNP 260 R+ K A + G+ Y+ L P F N+ + + Sbjct: 232 FTDRVNKGETSFATLARLYSEDPGSARMGGEMDYIGRGMLDPAFANVAFNLTDPKKISKI 291 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++ G I + DKR G+ ++ P + + + +L Sbjct: 292 VESEFGYHIIQLIDKR---GDKIKCRHIL--LKPQVSQDAIDKSIGRL 334 >gi|83815316|ref|YP_446773.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Salinibacter ruber DSM 13855] gi|83756710|gb|ABC44823.1| PPIC-type PPIASE domain protein [Salinibacter ruber DSM 13855] Length = 342 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 15/265 (5%), Positives = 60/265 (22%), Gaps = 7/265 (2%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + + + + + ++LI ++ + + Sbjct: 69 QQQVRMSMKRQAPSQQSEDQMQETHRQLIRGFARQHALRGEAKAQNLEVDPTQVNARLEK 128 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 E F + + ++ + + + E + Sbjct: 129 LKQRYESEEQFQKQLARNNMTVDSVRSLLADQFRQQQLQRQMAENYEEPSSDDVTAYSEK 188 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + + + + + +++ + + G Sbjct: 189 NRRIRAQHILIKAGENAPESEVDSARKAAAALVDSAKMEDVDFAELARRHSQGPSAQKGG 248 Query: 233 KAQYLLESDLHPQFQNLLK--KSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 + + +F + P T+ G I + + + Sbjct: 249 DLGFFTRDRMVDKFAEAAYALSDSGDVAPEPVRTRFGFHVIRLTNAGEPMDTTKA----R 304 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAII 314 Q T + ++ + + L +A + Sbjct: 305 KQMTKERRQQAVEDQINALLEDATV 329 >gi|229096816|ref|ZP_04227786.1| Foldase protein prsA 1 [Bacillus cereus Rock3-29] gi|228686658|gb|EEL40566.1| Foldase protein prsA 1 [Bacillus cereus Rock3-29] Length = 293 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 29/318 (9%), Positives = 87/318 (27%), Gaps = 48/318 (15%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALL 63 + + S+ +L L +++ + S + T + +T+ ++SK + Sbjct: 1 MHNNKSEVFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--VTEKELSKELK-- 56 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 + + + ++++ + + + + Sbjct: 57 ------QKYGESTLYQMVLSKALLDKY-------KVSDEEATKQVKEAKDKMGDNFKETL 103 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 ++ K+ + + + +K K + + Sbjct: 104 EKLGLKNEDELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD--------- 154 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 +K K+ +E ++++ G+ Sbjct: 155 ---------------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEIAGFGPGQT 199 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 +F+ K + + P T G I + DK++L +K + +++ Sbjct: 200 VKEFEEAAYKLNAGQVSEPVKTSYGYHIIKVTDKKELKPFEEVKDKIRKDLEQQRLQDTT 259 Query: 302 AEY----VKKLRSNAIIH 315 ++ V L +A I Sbjct: 260 GKWKQQVVNDLLKDADIK 277 >gi|148653423|ref|YP_001280516.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter sp. PRwf-1] gi|148572507|gb|ABQ94566.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter sp. PRwf-1] Length = 624 Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 47/399 (11%), Positives = 101/399 (25%), Gaps = 87/399 (21%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + L + + L I+ + SY S A S + + I+ + + Sbjct: 1 MESIRNFLQSWPGRIFLMLCLSPLVILGLESYFSGASSVNEVAKVGDQTISRAEYQDGLN 60 Query: 62 LLKLQK----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 + + L ++ LI L + + + G+ +N +Q + Sbjct: 61 GRRNELLQGGVEASAINTQALNSEVLKGLINRALLRNQTDHLGMHVSDAAINNLLLQDPQ 120 Query: 112 ----NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------------- 148 N S + F+ L +QGI + Q + Sbjct: 121 YLDENGQFSNDRFAFALQQQGITKDQLFAQYRQQLNLMQLYASVAQTAVYPESQIHDLLA 180 Query: 149 --------------KNDFMLKYGNLEMEIPANKQKMKNITVREYL--------------- 179 F K + EI + K+ + Sbjct: 181 LQLETRDVWVYRLPWEQFKDKVSVSDKEISDYYNENKSKLNSRAMVDLAYVSLDPSKLPV 240 Query: 180 ---IRTVLFSIPDNKLQNQG---------------FVQKRIKDAEESRLRLPKDCNKLEK 221 + L + D+ + ++ E+ + ++ Sbjct: 241 EKVTQAELQAQYDDYKARFVGNSKQKVSQILVTGSKAEATMQQIEQRLKKGESFAAIAKE 300 Query: 222 FASKI-HDVSIGKAQYLLESDLH----PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK- 275 + G Q L + + P T G + + DK Sbjct: 301 LSEDPVSAAKGGDIGTFNADAFGADGQKVAQALSGLEKGEVSAPVKTSFGYQLFKVTDKS 360 Query: 276 -RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + +++ L+AQ K E+ A+ + + A Sbjct: 361 GDSVPSLESMRDELTAQAQRQKREQLIADKITSINDMAT 399 >gi|308271396|emb|CBX28004.1| hypothetical protein N47_G33280 [uncultured Desulfobacterium sp.] Length = 332 Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 122/333 (36%), Gaps = 20/333 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M SK T L++ ++ + +LI+ + R+ +N +VIT D+ Sbjct: 1 MKSKFTTYLNN---IVMIFILLILQAGFIYDKPCGAEVVDRVVAVVNDDVITLSDLEVAT 57 Query: 61 ALLKLQKING------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + + ++ + + +LI L QEI+K GI+ + ++ + Sbjct: 58 RAYTEKIKSAGYGFEEEHAMLFKMREDMLDQLINRKLTDQEIKKYGISTNDKEIDNSIER 117 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 L+ E+ + + K G+ + F+ + + V+ + K + + A Sbjct: 118 IKEAKYLTDEELRNMVTKDGMTFDDFRDAIKENILRSKVLDIEVKSKIVITKEDTKAYYD 177 Query: 169 KMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 K+ +Y + ++ + + + ++L+ + ++ K +++ Sbjct: 178 SHKSDYMPQNKYHLFNIIIKTNSEADGDDKHEAMSVMEKIYAKLKQGQPFEEVSKDSAES 237 Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK--RDLGGEIA 283 V Y +L PQ Q+ +K Q T T G + I I D + Sbjct: 238 SGVENSDLGYFKADELSPQIQDAIKNLKQKEFTKILETDLGYQIIYIKDIEVKPGKSLDE 297 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A + I+K+ ++++LR + I Sbjct: 298 AAAGIQGILFNDIIDKNFKLWMEQLRKKSYIKI 330 >gi|77458729|ref|YP_348235.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens Pf0-1] gi|77382732|gb|ABA74245.1| putative peptidylprolyl isomerase [Pseudomonas fluorescens Pf0-1] Length = 310 Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 26/285 (9%), Positives = 82/285 (28%), Gaps = 33/285 (11%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKING-ELEKIAVQELIVETLKKQEIEKSG 94 A S + + ++ ++ +A + Q + A++ I L ++ + + Sbjct: 36 AANSGPAVARLGNQQVSPEELQALLAAVPPQTREQLRGNREALERWIRSRLAEKAVLEQA 95 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN--DF 152 Q Q ++ D +++ Sbjct: 96 DAQGWAQRPDVVRQTRA--------------------------ATEQIVFRDYLQSVSQV 129 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 Y + A N + +F + + ++ + +++++ Sbjct: 130 PADYPSAAELQQAYDAGKANWQTPALYRVSQIFLGVNEPQNLEAVRKQATELSKKAQATS 189 Query: 213 PKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 ++F+ + G L P+ + ++ + ++P + G I Sbjct: 190 ADFAGLAKEFSQDRLTAERGGDTGLQPLQQLVPEVRGVVARLKVGAVSDPVQSSGGFHVI 249 Query: 271 AICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + +++ L+ L+ + E+ Y+ + + A Sbjct: 250 KLTEQQPARTATLDELRDQLTQALRAQRQEQIAQAYLDGMLNTAT 294 >gi|221135500|ref|ZP_03561803.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Glaciecola sp. HTCC2999] Length = 626 Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 30/396 (7%), Positives = 98/396 (24%), Gaps = 96/396 (24%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ L ++ +++ F + SY + + +NGE I+ + + Sbjct: 1 MLERMREGLQGPWAMIIVALIVLSFVFAGVGSYLA-SPVDTAAAKVNGEDISARALDQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + ++ L+ + L +Q+ + G+ + Sbjct: 60 QNERARLESQFGEGISSLFANPEYLANFRQGILERLVADKLVEQKAQALGLRVSDTQIKD 119 Query: 105 FFVQHAR-------NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV--------- 148 + N + N+ + + + + ++ Sbjct: 120 TILSMPEFQVGGVFNNDRYLAVLRQAGFQVDDFRNYMRNTMTKEQLSRALLATDFVVPNE 179 Query: 149 --------------------KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV----- 183 +F +++I Q + + + Sbjct: 180 VITQLNLGRQTRDVKYATIPTANFADTIELSDLDITNYYQTNIDTYDTQEQVSIEYVELK 239 Query: 184 --------------LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL---------- 219 + + N +R + Sbjct: 240 VSDLMDGVNATDAQIEEYYQFNIANYRTEAQRRVSHILIESGDDTAAAEAKIAEVQAKLN 299 Query: 220 ---------EKFASKI-HDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGV 267 + ++ + G +++ DL P F + ++ + ++ T G Sbjct: 300 AGEDFAELAKTYSDDTFSAENGGDLEFITIGDLDPAFDEAVLALENVGDVSDIVATDFGF 359 Query: 268 EYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHE 301 I + D ++ + +K ++ + Sbjct: 360 HLITLTDFTPAEVTPFVDVKDEIAEAVKLEIATEAF 395 >gi|57238339|ref|YP_179467.1| hypothetical protein CJE1481 [Campylobacter jejuni RM1221] gi|57167143|gb|AAW35922.1| conserved hypothetical protein [Campylobacter jejuni RM1221] gi|315058774|gb|ADT73103.1| Possible periplasmic protein [Campylobacter jejuni subsp. jejuni S3] Length = 271 Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 34/296 (11%), Positives = 79/296 (26%), Gaps = 32/296 (10%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 I+ S S + I ++ E IT DI + + +LK+ A+ LI Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKVLKID------RNKALGVLIN 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E ++ ++++ GI + ++ + + F + L + F+ Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRANFKKDL 117 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + + + + Y + +N + + Sbjct: 118 EKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANIYLSNNPQTLENIKNTKK 177 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 + L + L + + Sbjct: 178 TILKPQNASLN------------------------TSNADPRLLGLLSQIPVGGFSPVLN 213 Query: 263 TQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G E + + +K + + + +Y KLRS I Y Sbjct: 214 GKNGYELYEVKSRDGAQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 269 >gi|218889849|ref|YP_002438713.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas aeruginosa LESB58] gi|218770072|emb|CAW25834.1| probable peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas aeruginosa LESB58] Length = 272 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 22/183 (12%), Positives = 67/183 (36%), Gaps = 5/183 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-RTVLFSIPDNKLQNQGFV 198 ++ +++ + + + + + L R VL + + L+ + Sbjct: 79 EEARIRQLLEEEVQVPEADEDACRTWYAANPGRLLGPWRLQLRHVLLACAPDDLEGRETA 138 Query: 199 QKRIKDAEESRLRLPKDC-NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257 +K+ + + P+ + +F++ S G ++ P+F+ L + Sbjct: 139 RKQAAELLDELRGHPERFVDLARRFSACPSKESGGDLGWIEPGQTVPEFEKRLLRRAPGL 198 Query: 258 TN-PYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P ++ G+ + + + + A +A ++A +++ +Y+ L +A I Sbjct: 199 LEHPLESRYGLHVVELLAREGGEPLDFDAARAQIAAHLQAQVLQRAVGQYIGVLAGDACI 258 Query: 315 HYY 317 + Sbjct: 259 EGF 261 >gi|2765458|emb|CAA75544.1| NifM protein [Pseudomonas aeruginosa PAO1] Length = 250 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 22/183 (12%), Positives = 67/183 (36%), Gaps = 5/183 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-RTVLFSIPDNKLQNQGFV 198 ++ +++ + + + + + L R VL + + L+ + Sbjct: 57 EEARIRQLLEEEVQVPEADEDACRTWYAANPGRLLGPWRLQLRHVLLACAPDDLEGRETA 116 Query: 199 QKRIKDAEESRLRLPKDC-NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257 +K+ + + P+ + +F++ S G ++ P+F+ L + Sbjct: 117 RKQAAELLDELRGHPERFVDLARRFSACPSKESGGDLGWIEPGQTVPEFEKRLLRRAPGL 176 Query: 258 TN-PYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P ++ G+ + + + + A +A ++A +++ +Y+ L +A I Sbjct: 177 LEHPLESRYGLHVVELLAREGGEPLDFDAARAQIAAHLQAQVLQRAVGQYIGVLAGDACI 236 Query: 315 HYY 317 + Sbjct: 237 EGF 239 >gi|52143135|ref|YP_083692.1| peptidylprolyl isomerase [Bacillus cereus E33L] gi|51976604|gb|AAU18154.1| protein export protein [Bacillus cereus E33L] Length = 283 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 30/308 (9%), Positives = 83/308 (26%), Gaps = 48/308 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 + L +++ + S + T + IT+ ++SK + + Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--ITEKELSKELR--------QKYG 50 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + + ++++ + + S + S+ ++ Sbjct: 51 ESTLYQMVLSKALLDKYKVSDEEAKKQVEE-------AKDKMGDNFKSTLEQVGLKNEDE 103 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 K+ + + + +K K + + Sbjct: 104 LKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILIKD------------------- 144 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 +K K+ +E ++++ G+ +F+ K Sbjct: 145 -----EKTAKEVKEKVSNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEEAAYK 199 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKK 307 + P T G I + DK++L +K + +++ ++ V Sbjct: 200 LDAGQVSEPVKTTYGYHIIKVTDKKELKPYDEVKDQIRKDLEQQRLQDTTGKWKQQVVND 259 Query: 308 LRSNAIIH 315 L +A I Sbjct: 260 LLKDADIK 267 >gi|15599066|ref|NP_252560.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas aeruginosa PAO1] gi|9950050|gb|AAG07258.1|AE004804_6 probable peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas aeruginosa PAO1] Length = 272 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 22/183 (12%), Positives = 67/183 (36%), Gaps = 5/183 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-RTVLFSIPDNKLQNQGFV 198 ++ +++ + + + + + L R VL + + L+ + Sbjct: 79 EEARIRQLLEEEVQVPEADEDACRTWYAANPGRLLGPWRLQLRHVLLACAPDDLEGRETA 138 Query: 199 QKRIKDAEESRLRLPKDC-NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257 +K+ + + P+ + +F++ S G ++ P+F+ L + Sbjct: 139 RKQAAELLDELRGHPERFVDLARRFSACPSKESGGDLGWIEPGQTVPEFEKRLLRRAPGL 198 Query: 258 TN-PYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P ++ G+ + + + + A +A ++A +++ +Y+ L +A I Sbjct: 199 LEHPLESRYGLHVVELLAREGGEPLDFDAARAQIAAHLQAQVLQRAVGQYIGVLAGDACI 258 Query: 315 HYY 317 + Sbjct: 259 EGF 261 >gi|218232569|ref|YP_002365948.1| peptidylprolyl isomerase [Bacillus cereus B4264] gi|218160526|gb|ACK60518.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus B4264] Length = 285 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 28/304 (9%), Positives = 77/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT + K++ K Sbjct: 4 KHIFIITALISILMLSACEQKNGSATVATATDSTITKDNFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + + + + F ++ Sbjct: 56 LYEMMAQDVITKKYKVPDEEVNKEVE-----------KVKKQYGDQFKKVLENYGLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSITEKDIKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ + ++ + + G Y + P+F+ K + Sbjct: 145 SDENEAKEIKSKLDAGASFEELAKQESQDLLSKDKGGDLGYFNSGTMAPEFETAAYKLNV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+DL +K + + + +++ A Sbjct: 205 GQISNPVKSSNGYHVIKLTDKKDLKPYDEVKNSIRKNLEEERTADPVFSKKLLQEELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|153005190|ref|YP_001379515.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. Fw109-5] gi|152028763|gb|ABS26531.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. Fw109-5] Length = 320 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 37/297 (12%), Positives = 80/297 (26%), Gaps = 54/297 (18%) Query: 41 RIRTTINGEVITDGDISKRIA----LLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 I +G +T K++ ++ + E +K ++ LI L +E + G+ Sbjct: 25 PIVAKGDGISVTADAFKKKLDEQSPFIRARYSALERKKEFLENLIRFELLAREAQAKGLD 84 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 D + + +V+ F + Sbjct: 85 KDPEVQETL----------------------------------KKIMVQKLVRQAFDSEA 110 Query: 157 -GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-- 213 + E + + V+ R + +RL++ Sbjct: 111 GKPADDEARKYYDEHLDEFVKPERARVSAVIFAAPAGSPDRAAKAGQAKNALARLKVEGP 170 Query: 214 ----KDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN------LLKKSQNNTTNPYV 262 N + + + G Y + +L Q + + Sbjct: 171 KNPLAFSNLARELSDDPVTKAAGGDLGYRTKEELSAQHSPELANAAFALREVGQESGVVE 230 Query: 263 TQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 T +G + + ++ +KA ++A+ K YVK LR A I + Sbjct: 231 TPRGFAILKLGARQAPIDRPFDEVKAQIAARIGRESRTKEFDSYVKGLREKASIEIF 287 >gi|218897938|ref|YP_002446349.1| foldase protein PrsA [Bacillus cereus G9842] gi|218541254|gb|ACK93648.1| foldase protein PrsA [Bacillus cereus G9842] Length = 280 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + V+ + +S + S I TT +G I++ D +K++ K Sbjct: 1 MKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGK 51 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E D Sbjct: 52 QNLSEMVVEKVLDDKYKVTDEEVT---------------KQLKELKDKMGDNFNTYMESN 96 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + V L++ Sbjct: 97 GVKNEDQLKEKLKLTFAFEKAIKATVTEKDFKDHYKPKLQVSHILVK------------- 143 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G+ + +F++ K Sbjct: 144 ---DEKTAKEIKEKLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 200 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + DK++L K + + +I+ + + + L Sbjct: 201 EVGQLSEPVKSSFGYHIIKLTDKKELKSYEEEKENIRKELEQQRIQDPQFHQQVTRDLLK 260 Query: 311 NAIIH 315 NA I Sbjct: 261 NADIK 265 >gi|259047483|ref|ZP_05737884.1| foldase protein PrsA [Granulicatella adiacens ATCC 49175] gi|259035674|gb|EEW36929.1| foldase protein PrsA [Granulicatella adiacens ATCC 49175] Length = 315 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 30/307 (9%), Positives = 82/307 (26%), Gaps = 21/307 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + + +++ ++ S +S T +T + + + + Sbjct: 1 MKKKFTGMLVLASTLALAACSNNTNSETIATTKYGNVTREEFVNAMK--------DTVGE 52 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 +Q L++ + + +E S + + L Sbjct: 53 QTLQRLVLTKVLEGSVEDSKKLKEDAEQEVA------KLVAQYGGENGMLAALKQSGIAS 106 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 ++ + +I + + + + + Sbjct: 107 VDAYRQTIYLNKLMTAAVKKAAAFTDEDIKKYYDEWEPQIK--VQHILIAAKATASDEEK 164 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKK 252 K + ++ + E A G+ SD+ +F + K Sbjct: 165 AAAKAKAEELIQKLKDGADFSELAKENSADTGTASKGGEIGPFKRSDMVKEFSEASYNLK 224 Query: 253 SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLR 309 + + T P TQ G I + DK + +K+ + + K++ + + + L Sbjct: 225 NVGDITETPVETQFGYHIIKMLDKGEKKPFDEVKSQMEDEMLQAKLKDSAYLHQTMVDLL 284 Query: 310 SNAIIHY 316 A + Sbjct: 285 KGADVKI 291 >gi|254468807|ref|ZP_05082213.1| PpiC-type peptidyl-prolyl cis-trans isomerase [beta proteobacterium KB13] gi|207087617|gb|EDZ64900.1| PpiC-type peptidyl-prolyl cis-trans isomerase [beta proteobacterium KB13] Length = 627 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 41/395 (10%), Positives = 104/395 (26%), Gaps = 93/395 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + L + +++ F + I SY + S+ ++N IT D + + Sbjct: 1 MLETIRNGLEKKWAKVVLAIIVVPFALFGIDSYLNSMGSNVTVASVNNFEITAQDFQRSM 60 Query: 61 ALLKLQ----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---V 107 +L+ + + E K + L+ L K ++K + ++ + Sbjct: 61 MVLQERLDAEGQDRSILQSPEFRKSVIDSLVDSQLIKSAVDKYNFRISDDQLSTYIVGMP 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------------- 150 N S + + + G+ +Q + + Sbjct: 121 DFQENGKFSQDRYDQIVQYNGLTPKKLEQQIRGDMATQQIQGTLANLTYFPKKNIEEIAK 180 Query: 151 ----------------DFMLKYGNLEMEIPANKQKMKNITVRE---------YLIRTVLF 185 D+ K + EI + + +R Y + ++ Sbjct: 181 IAYQKRHVKLYDMLLLDYEDKIKVTDDEIKEFYEANTDSFIRPDQVKIEFVVYSVANIVP 240 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI------------------- 226 ++ + + F + ++ E R + + Sbjct: 241 NVSVTDEEVKEFYEFNKQNYEGDEERSASHILFMADASQSDEEVEKVRQKASNVLKDIKK 300 Query: 227 -----------------HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVE 268 + G + + +F+ ++ ++ T G Sbjct: 301 DPNKFEEYAKDLSQDPESAKNGGSLGFFKRGVMVKEFEESAFTLNKGEISDLVRTDFGFH 360 Query: 269 YIAICDKR-DLGGEIALKAYLSAQNTPTKIEKHEA 302 I + D + D +KA + + K + Sbjct: 361 IIRLDDVKGDQVSFKDVKAQVKGELLYGKALEIYN 395 >gi|206562085|ref|YP_002232848.1| putative peptidylprolyl isomerase [Burkholderia cenocepacia J2315] gi|198038125|emb|CAR54073.1| putative peptidylprolyl isomerase [Burkholderia cenocepacia J2315] Length = 280 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 81/319 (25%), Gaps = 61/319 (19%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSR----IRTTINGEVITDGDISKRIALLKLQKI 68 I +++T L C P+ + + +N I D+ I Q + Sbjct: 6 ISIVSTLIALACACGAPVARAAGTKTDTPLPPGVEAVVNDTPIARSDVDSMIEATG-QTV 64 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 EL A +ELI + L +Q EK+ Sbjct: 65 TPELRAQAKRELIAQHLVEQAAEKANYGSRPEVNRVVM---------------------- 102 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + ++++ + + N EY + + P Sbjct: 103 --------RARTVAATDLYLRDNVHPQAVTDAQVKARYDDIVANAAQFEYRADVIAVADP 154 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL---------LE 239 +++ +K+ + + G AQ++ Sbjct: 155 AEVNALVAELKQ-----------GAAFDAVAKKYNTTP---NGGVAQWVELRTPVAEGKT 200 Query: 240 SDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTK 296 L P Q + P + + +KR + A K L Q Sbjct: 201 GGLPLPLAQAITSLQPGAVAGPIRVGNAFAIVKLDEKRATVVPTFEAAKNVLRQQLEGQA 260 Query: 297 IEKHEAEYVKKLRSNAIIH 315 ++ V KL A I Sbjct: 261 QQRAMTALVDKLAGQATIQ 279 >gi|254242564|ref|ZP_04935886.1| hypothetical protein PA2G_03316 [Pseudomonas aeruginosa 2192] gi|126195942|gb|EAZ60005.1| hypothetical protein PA2G_03316 [Pseudomonas aeruginosa 2192] Length = 272 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 21/183 (11%), Positives = 67/183 (36%), Gaps = 5/183 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-RTVLFSIPDNKLQNQGFV 198 ++ +++ + + + + + L R VL + + L+ + Sbjct: 79 EEARIRQLLEEEVQVPEADEDACRTWYAANPGRLLGPWRLQLRHVLLACAPDDLEGRETA 138 Query: 199 QKRIKDAEESRLRLPKDC-NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257 +K+ + + P+ + +F++ + G ++ P+F+ L + Sbjct: 139 RKQAAELLDELRGHPERFVDLARRFSACPSKEAGGDLGWIEPGQTVPEFEKRLLRRAPGL 198 Query: 258 TN-PYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P ++ G+ + + + + A +A ++A +++ +Y+ L +A I Sbjct: 199 LEHPLESRYGLHVVELLGREGGEPLDFDAARAQIAAHLQAQVLQRAVGQYIGVLAGDACI 258 Query: 315 HYY 317 + Sbjct: 259 EGF 261 >gi|116051907|ref|YP_789250.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas aeruginosa UCBPP-PA14] gi|115587128|gb|ABJ13143.1| putative peptidyl-prolyl cis-trans isomerase [Pseudomonas aeruginosa UCBPP-PA14] Length = 272 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 21/183 (11%), Positives = 67/183 (36%), Gaps = 5/183 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-RTVLFSIPDNKLQNQGFV 198 ++ +++ + + + + + L R VL + + L+ + Sbjct: 79 EEARIRQLLEEEVQVPEADEDACRTWYAANPGRLLGPWRLQLRHVLLACAPDDLEGRETA 138 Query: 199 QKRIKDAEESRLRLPKDC-NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257 +K+ + + P+ + +F++ + G ++ P+F+ L + Sbjct: 139 RKQAAELLDELRGHPERFVDLARRFSACPSKEAGGDLGWIEPGQTVPEFEKRLLRRAPGL 198 Query: 258 TN-PYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P ++ G+ + + + + A +A ++A +++ +Y+ L +A I Sbjct: 199 LEHPLESRYGLHVVELLGREGGEPLDFDAARAQIAAHLQAQVLQRAVGQYIGVLAGDACI 258 Query: 315 HYY 317 + Sbjct: 259 EGF 261 >gi|325522151|gb|EGD00807.1| putative peptidylprolyl isomerase [Burkholderia sp. TJI49] Length = 280 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 42/319 (13%), Positives = 81/319 (25%), Gaps = 61/319 (19%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSR----IRTTINGEVITDGDISKRIALLKLQKI 68 I +++ L C PI + + +N I D+ I Q + Sbjct: 6 ISIVSALIALACACGAPIARAAGTKTETPLLPGVEAVVNDTPIARSDVDSMIEA-SGQAV 64 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 L A +ELI L +Q EK+ Sbjct: 65 TPALRAQAKRELIARQLLEQTAEKADY------------------------------GSR 94 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N + V+++ + + N EY + Sbjct: 95 PEVNRVVTRARTVAATDLYVRDNVHPQAVTDAEVKARYDHIVANAAQFEYRAEVI----- 149 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL---------LE 239 ++ + + +++ + + G AQ++ Sbjct: 150 ------AVADPAQMNTVIAALKQGAAFDTLAKQYNTTP---NGGVAQWVELRTPVAEGST 200 Query: 240 SDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTK 296 L P + + P + + + +KR + A K L Q Sbjct: 201 GGLPTPIAEAITSLQPGAVAGPIRIGNALAIVKLDEKRPTTVPTFDAAKKVLRQQLEAEA 260 Query: 297 IEKHEAEYVKKLRSNAIIH 315 ++ A V KL + A I Sbjct: 261 QQRAMAALVDKLAAQATIQ 279 >gi|218562900|ref|YP_002344679.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|112360606|emb|CAL35403.1| possible periplasmic protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315928422|gb|EFV07735.1| surA N-terminal domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 271 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 79/296 (26%), Gaps = 32/296 (10%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 I+ S S + I ++ E IT DI + + LK+ A+ LI Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKALKID------RNKALGVLIN 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E ++ ++++ GI + ++ + + F + L + F+ Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRTNFKKDL 117 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + + + + Y + +N + + Sbjct: 118 EKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANIYLSNNPQTLENIKNTKK 177 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 + L + L + + + Sbjct: 178 TILKPQNASLN------------------------TSNADPRLLGLLSQIPVGSFSPVLN 213 Query: 263 TQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G E + K +K + + + +Y KLRS I Y Sbjct: 214 GKNGYELYEVKSKDGTQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 269 >gi|206971880|ref|ZP_03232829.1| foldase protein PrsA [Bacillus cereus AH1134] gi|206733265|gb|EDZ50438.1| foldase protein PrsA [Bacillus cereus AH1134] gi|326940633|gb|AEA16529.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar chinensis CT-43] Length = 280 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + V+ + +S + S I TT +G I++ D +K++ K Sbjct: 1 MKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGK 51 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E D Sbjct: 52 QNLSEMVVEKVLNDKYKVTDEEVT---------------KQLKELKDKMGDNFNTYMESN 96 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + V L++ Sbjct: 97 GVKNEDQLKEKLKLTFAFEKAIKATVTEKDIKDHYKPKLQVSHILVK------------- 143 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G+ + +F++ K Sbjct: 144 ---DEKTAKEIKEKLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 200 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + DK++L K + + +I+ + + + L Sbjct: 201 EVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRDLLK 260 Query: 311 NAIIH 315 NA I Sbjct: 261 NADIK 265 >gi|322834042|ref|YP_004214069.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rahnella sp. Y9602] gi|321169243|gb|ADW74942.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rahnella sp. Y9602] Length = 626 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 31/399 (7%), Positives = 100/399 (25%), Gaps = 87/399 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + + +++ F + + +Y +NG+ I + + + Sbjct: 1 MMDNLRAAANHVVLKIILALIILSFILTGVGNYLIGGSGDY-AAKVNGQEIGRAQLEQAV 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +L + ++ LI TL Q +K GIT + Sbjct: 60 QNQRSRLQQQLGDQFSALAGSDGYMQQLRQESLSNLIDVTLLDQYSKKLGITVSDQQIKD 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY---LAIQSIWPDVVKND---------- 151 + D + +L + + Q I + + Sbjct: 120 AIFATPQFQTDGRFDNAKYLQSIQGMGYTADNFAQLMKQQLISQQLEQAYGQSDFVLPVE 179 Query: 152 -------------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + + E++ ++ K ++ + + + Sbjct: 180 SKSLGGLILQSRDVQTATLDTDALAAKQQVTDAELQAFYDQNKNSFLSPEQVKVSYIEMD 239 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPK-----------------------------DCN 217 + + ++ + + Sbjct: 240 AAAMQGKTNVTDADISAYYDQHKSEFGQPERRRYSVIVLKSQADADAVAAELKKGTDFAE 299 Query: 218 KLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK- 275 + ++ G ++ P+F+N ++ + + G + + D Sbjct: 300 LAKTKSTDALSARQGGDLGWMEPETTLPEFKNANLTTKGQVSGVIKSDSGFFILRLDDVT 359 Query: 276 -RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ ++ + K +K+ A Sbjct: 360 PEQVKPLADVRNTIADKLKQEKSLDAYYALQQKVSEAAT 398 >gi|229179148|ref|ZP_04306503.1| Foldase protein prsA 1 [Bacillus cereus 172560W] gi|228604303|gb|EEK61769.1| Foldase protein prsA 1 [Bacillus cereus 172560W] Length = 285 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 86/305 (28%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 L V+ + +S + S I TT +G I++ D +K++ K Sbjct: 6 LKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGK 56 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E D Sbjct: 57 QNLSEMVVEKVLNDKYKVTDEEVT---------------KQLKELKDKMGDNFNTYMESN 101 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + V L++ Sbjct: 102 GVKNEDQLKEKLKLTFAFEKAIKATVTEKDIKDHYKPKLQVSHILVK------------- 148 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G+ + +F++ K Sbjct: 149 ---DEKTAKEIKEKLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 205 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + DK++L K + + +I+ + + ++L Sbjct: 206 EVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRELLK 265 Query: 311 NAIIH 315 NA I Sbjct: 266 NADIK 270 >gi|146339260|ref|YP_001204308.1| putative peptidylprolyl isomerase [Bradyrhizobium sp. ORS278] gi|146192066|emb|CAL76071.1| putative peptidylprolyl isomerase [Bradyrhizobium sp. ORS278] Length = 341 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 28/281 (9%), Positives = 74/281 (26%), Gaps = 32/281 (11%) Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98 + + + +T ++ I L ++ + A+ Sbjct: 62 NDEVVARVGDSDVTADEVRATIVTLDPRQQAALMRDPAL--------------------- 100 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 ++ N + E + D+Q + + Sbjct: 101 ---LSQTVRAILANRLVLKEALAKKWDQQPAVVAQLARARESILTEGYLQSVTQPPDSYP 157 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 E +I A + + + R + ++ K E+ +L + Sbjct: 158 SEADIKAAYEVNMSAFLVPRRFRIAQILVALANDADKAAEDAAKKKLEDVVRKLKQPGTD 217 Query: 219 LEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 A G+ ++ E +L + ++ + ++ T+P G + + Sbjct: 218 FAALARASSDETATAEKDGEIGWVPEPNLRGEIRSQVAGLAKGGVTDPIRLDDGWHVVKL 277 Query: 273 CDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 D +K L + + + + YV +L Sbjct: 278 LDTDASTTRPLAEVKDVLIQRLRAERADANRRAYVAELVKQ 318 >gi|315127185|ref|YP_004069188.1| peptidyl-prolyl cis-trans isomerase D (PPIase D) (rotamase D) [Pseudoalteromonas sp. SM9913] gi|315015699|gb|ADT69037.1| peptidyl-prolyl cis-trans isomerase D (PPIase D) (rotamase D) [Pseudoalteromonas sp. SM9913] Length = 633 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 39/398 (9%), Positives = 102/398 (25%), Gaps = 96/398 (24%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + + V++ F + I SY +NG I+ + S+ Sbjct: 1 MLEKIREGSQGPVAKVILGAVILSFALAGIGSYLGQTTEQP-VAEVNGIKISQTEFSRAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + ++ + + L+ + L+ Q + G+ ++ Sbjct: 60 QNERSRLEQQFGEYFTQIAADPTYMAQIRQGVIDRLVQQELQSQLATELGLRVSDESIRQ 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 + + + + + + F++YL +V Sbjct: 120 TILELPYFKIGDQFNNDRYLQVIRQMNFQPDSFREYLRDDMTRSQLVSAVAGTDFALQNE 179 Query: 149 --------------------KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS-- 186 K + E+ + + LI Sbjct: 180 LKSAIALQQQTRSIDYLVIDKQAMQADVDVTDQEVADYYELNAGQFLSPELISVNYIELD 239 Query: 187 ----------------IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA------- 223 + +KR D K + + Sbjct: 240 ADDIDVASVSEDDVKAYYEQSKAQYVEPEKRRVSHILIDNSEDDDAAKAKAESLLAQLNA 299 Query: 224 -------------SKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVE 268 + G +++ + P F++ +++ + ++ ++ G Sbjct: 300 GADFAQLAESSSDDIVSAEMGGDLEWIERDVMEPAFEDAAFALQNKGDYSDVVASEFGYH 359 Query: 269 YIAICDK--RDLGGEIALKAYLSAQNTP-TKIEKHEAE 303 I + D + + A+KA L A+ K++ + Sbjct: 360 IIKLTDIQSQQVKPYDAVKADLRAELEQAEKVDAFYEK 397 >gi|241663100|ref|YP_002981460.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii 12D] gi|240865127|gb|ACS62788.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii 12D] Length = 265 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 68/280 (24%), Gaps = 48/280 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +NG+ I + I Q + EL A L+ L +Q+ K G Sbjct: 27 AAVVNGKAIPSAKVDALIKK-SGQPESPELRAKARDMLVDRELIEQDAAKRG-------- 77 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + + Q + +V +F N Sbjct: 78 --------------------------LLERDDVQEQLASARLNVLVAAEFEDYVKNSPAT 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++ I + + + K + + Sbjct: 112 EDELHKQYDKIKAQFGNGKEYHAHHILVDKEADAKA------IIAKLKAGAKFEDIAKAQ 165 Query: 223 ASK-IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDL- 278 + + G + P+F L + T P TQ G I + D RD Sbjct: 166 SKDKGSGANGGDLDWANPGTYVPEFSAALTGLKKGQITQTPVKTQFGWHVIRLDDTRDAK 225 Query: 279 -GGEIALKAYLSAQNTPTK--IEKHEAEYVKKLRSNAIIH 315 +K L + +K+LR A I Sbjct: 226 IPSYEDVKPQLLEMMMGDQNWQRSKFQAMLKELREKAKIQ 265 >gi|283954909|ref|ZP_06372425.1| hypothetical protein C414_000260181 [Campylobacter jejuni subsp. jejuni 414] gi|283793749|gb|EFC32502.1| hypothetical protein C414_000260181 [Campylobacter jejuni subsp. jejuni 414] Length = 271 Score = 80.1 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 81/296 (27%), Gaps = 32/296 (10%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 I+ S S + I ++ E IT DI + + +LK+ A+ LI Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKVLKID------RNKALGILIN 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E ++ ++++ GI + ++ + + F + L + F+ Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRTNFKKDL 117 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + + + + Y V + +N + + Sbjct: 118 EKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINVNIYLSNNPQTLENIKNTKK 177 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 + L + L + + Sbjct: 178 ITLKSQNASLN------------------------TSNADPRLLGLLSQIPNGGFSPVLN 213 Query: 263 TQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G E + +K +K + + + +Y KLRS I Y Sbjct: 214 GKNGYELYEVKNKDGAQTPEYKQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 269 >gi|224372671|ref|YP_002607043.1| foldase protein PrsA [Nautilia profundicola AmH] gi|223588937|gb|ACM92673.1| foldase protein PrsA [Nautilia profundicola AmH] Length = 286 Score = 80.1 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 27/320 (8%), Positives = 84/320 (26%), Gaps = 53/320 (16%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS------------SRIRTTINGEVITDGDISKRI 60 +K + ++ + + + TI+G+ +T D++ + Sbjct: 1 MKKIVLGGLIAAAAFAFPGMQGGMGNASMTGKPMKGLTDNTVVATIDGKKVTVKDVNNFL 60 Query: 61 ALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 + +L V + + + + + K + + V Sbjct: 61 QGMTADNRIRLQDLPAQHVGQFVKQYVDTMVLYKKAKSVEKTPQFQALV----------- 109 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + +K + ++ Sbjct: 110 ---------------------KKMAVDYWLKQKLNNMKISDAEVKKFYEENKDIYFKTTP 148 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 ++ + D K + + + + + +K+++ V+ G+ + Sbjct: 149 KVKARHIVVKDEKTAEKLINELKGLHGKALEEKF---AELAKKYSTGPTKVNGGELGWFD 205 Query: 239 ESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 + F + + K T P T+ G I + +K + + Q Sbjct: 206 PKQMVQPFAEAVNKMKPGELTLKPVKTRFGYHVILVEEKNEKNY--MPLNEVKLQIIEYL 263 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 + ++KL+ ++ + Sbjct: 264 KRAKLQKEIQKLKDSSKVDI 283 >gi|152988940|ref|YP_001346623.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas aeruginosa PA7] gi|150964098|gb|ABR86123.1| probable peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas aeruginosa PA7] Length = 272 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 21/183 (11%), Positives = 67/183 (36%), Gaps = 5/183 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-RTVLFSIPDNKLQNQGFV 198 ++ +++ + + + + + L R VL + + L+ + Sbjct: 79 EEARIRQLLEEEVQVPEADEDACRTWYAANPGRLLGPWRLQLRHVLLACAPDDLEGRETA 138 Query: 199 QKRIKDAEESRLRLPKDC-NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257 +K+ + + P+ + +F++ G +++ P+F+ L + Sbjct: 139 RKQAAELLDELRGHPERFVDLARRFSACPSKEEGGDLGWIVPGQTVPEFEKRLLRRAPGL 198 Query: 258 TN-PYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P ++ G+ + + + + G A +A ++ +++ +Y+ L +A I Sbjct: 199 LEHPLESRYGLHVVELLAREGGEPLGFDAARAQIATHLQAQVLQRAVGQYIGVLAGDARI 258 Query: 315 HYY 317 + Sbjct: 259 EGF 261 >gi|256820408|ref|YP_003141687.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga ochracea DSM 7271] gi|256581991|gb|ACU93126.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga ochracea DSM 7271] Length = 451 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 87/309 (28%), Gaps = 15/309 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--INGEL 72 + + V+++F + + +I + DI K L+ Q+ Sbjct: 5 KIWSALVILLFTTPFFAQNNERRKVDGVAAVVGDYLILESDIDKAYIDLQQQEVDTREIN 64 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH-----ARNTGLSAEDFSSFLDKQ 127 + +L+ + L + + + + V Q A+ G + + Sbjct: 65 RCQMLGKLMEDKLYAHQAVQDSVKLTDSEVRDQVNQRIEFLTAQLGGDIKKLLEFYKKDD 124 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 L S+ +K + E+ + + + I Sbjct: 125 EQSMRDELFNLLKVSMLAQRMKQQIIKDIEVTPEEVRTFFNAIPADERPHFGTELEIAQI 184 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH---DVSIGKAQYLLESDLHP 244 N + + VQK I + + + ++ A + S Sbjct: 185 VVNPVAPKSSVQKVINQLNDIKKDVEENGMSFSTKAILYSQDRATGGQVLTFNRNSAFDK 244 Query: 245 QFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEA 302 F+++ + + P+ + G I + R G+ ++ P + Sbjct: 245 AFKDVAFTLREGEISKPFESSFGWHIIQMDKIR---GKEVSVRHILLMPEIPQEALNEAK 301 Query: 303 EYVKKLRSN 311 E + K+R Sbjct: 302 EKIAKIRDR 310 >gi|296501860|ref|YP_003663560.1| peptidylprolyl isomerase [Bacillus thuringiensis BMB171] gi|296322912|gb|ADH05840.1| peptidylprolyl isomerase [Bacillus thuringiensis BMB171] Length = 285 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 77/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT LK + L ++ Sbjct: 4 KHIFIITALISILMLSACGQKNGSATVATATDSTITK---DNFEKQLKDRYGKDMLYEMM 60 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 Q++I + K VN + + G F ++ Sbjct: 61 AQDIITKKYK----------VPDEEVNKEVEKVKKQYG------DQFKKVLENYGLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSITEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ + ++ + + G Y + P+F+ K + Sbjct: 145 SDENEAKEIKSKLDAGASFEELAKQESQDLLSKDKGGDLGYFNSGTMAPEFETAAYKLNV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+DL +K + + + +++ A Sbjct: 205 GQISNPVKSSNGYHVIKLTDKKDLKPYDEVKNSIRKNLEEERTADPVFSKKLLQEELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|312878320|ref|ZP_07738236.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor lactoaceticus 6A] gi|311794903|gb|EFR11316.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor lactoaceticus 6A] Length = 343 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 106/341 (31%), Gaps = 30/341 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T + IK++ ++ + + S + IN E I + R Sbjct: 1 MNKILKTVKTHKIKIIGVVGFIVAILVAMFFVFSSSLQT---VLEINNEKINKKEFLMRY 57 Query: 61 ALLKLQK------------------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +LK L+ ++ LI ETL QE +K G+ Sbjct: 58 NILKQNAIEMSNRPDILDIEYSGMKYKDWLKNKVIELLITETLCLQEAKKRGMKLTFAEE 117 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + N + + + ++ Q + ++ + N+ ++ Sbjct: 118 QEV--NNYINNIKNDKYAREMFYEYLKKIKSNEELFKKQLLRERLIDKLYKEITKNVTLK 175 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 KQ +N +++ V + Q + +K + +K+ Sbjct: 176 EQEMKQYYENNKNEYRMVKVVDIFLRVENEQQKAEKEKLANQLMAKIKNGGSIFDLAQKY 235 Query: 223 AS-KIHDVSIGKAQYLLESDLHPQF-----QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 + + G Y + + +F + + + + T G I D++ Sbjct: 236 SEITTKNGQKGVIDYFRKGEKESEFGSVFEEKVFNLKKGEISEIIQTLNGYHIAQIIDEK 295 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 ++K + K +K EY+ +LR ++I + Sbjct: 296 FAP-YESVKGEIEQSLKKQKKDKVFQEYLNELRKKSVIKEF 335 >gi|315223421|ref|ZP_07865278.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga ochracea F0287] gi|314946594|gb|EFS98585.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga ochracea F0287] Length = 471 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 37/317 (11%), Positives = 90/317 (28%), Gaps = 17/317 (5%) Query: 9 LSDFIKLLTTY--FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66 ++ F+ + V+++F + + +I + DI K L+ Q Sbjct: 17 ITKFMNKTKIWSVLVILLFTTPFFAQNNERRKVDGVAAVVGDYLILESDIDKAYIDLQQQ 76 Query: 67 K--INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH-----ARNTGLSAED 119 + + +L+ + L + + + + V Q A+ G + Sbjct: 77 EVDTREINRCQMLGKLMEDKLYAHQAVQDSVKLTDSEVRDQVNQRIEFLTAQLGGDIKKL 136 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + L S+ +K + E+ + + Sbjct: 137 LEFYKKDDEQSMRDELFNLLKVSMLAQRMKQQIIKDIEVTPEEVRTFFNAIPADERPHFG 196 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH---DVSIGKAQY 236 + I N + + VQK I + + + ++ A + Sbjct: 197 TELEIAQIVVNPVAPKSSVQKVINQLNDIKKDVEENGMSFSTKAILYSQDRATGGQVLTF 256 Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TP 294 S F+++ + + P+ + G I + R G+ ++ P Sbjct: 257 NRNSAFDKAFKDVAFTLREGEISKPFESSFGWHIIQMDKIR---GKEVSVRHILLMPEIP 313 Query: 295 TKIEKHEAEYVKKLRSN 311 + E + K+R Sbjct: 314 QEALNEAKEKIAKIRDR 330 >gi|157736637|ref|YP_001489320.1| peptidyl-prolyl cis-trans isomerase [Arcobacter butzleri RM4018] gi|157698491|gb|ABV66651.1| peptidyl-prolyl cis-trans isomerase [Arcobacter butzleri RM4018] Length = 269 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 91/299 (30%), Gaps = 42/299 (14%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKINGELEKIAVQE 79 ++ + I + + T+NGE IT DI+ + + K+ E + +++ Sbjct: 4 IVSSLVASIALATALNAADVSYATVNGENITKQDIAMALQDPRVDFDKLPQEAKTQILEQ 63 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 ++ L Q G+ D+ V Sbjct: 64 IVNMKLIAQHAIDDGVEKDAKYVEA-------------------------------MKKI 92 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 ++ +V + + + K E + +K K V + + Sbjct: 93 KSNLALEVWQKNEIDKIKVTEADKKDFYEKNKEKFVEPETFEASHILVKTE-----AEAK 147 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT- 258 I +++ ++ K +K + G + P+F + +K T Sbjct: 148 DIISQLDKAPNKVEKFKELSKKSLDTASAKNGGALGRFAVEQMVPEFGSAVKALAKGTYS 207 Query: 259 -NPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P TQ G I + DK ++ ++ + K E V+ LR +A I Sbjct: 208 KTPVKTQFGYHVIYLKDKFPSKTFAYTEVEKNINQVLIGNALNKKIKELVEDLRKDAKI 266 >gi|172064761|ref|YP_001812411.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria MC40-6] gi|171998246|gb|ACB69162.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria MC40-6] Length = 282 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 40/319 (12%), Positives = 84/319 (26%), Gaps = 57/319 (17%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 FI + L I C+ + S + T+NG IT ++ + + Q Sbjct: 7 KTFIA--ASALYLGIACVAQAQTPASSTSPVGVVATVNGTAITQAEVDTVLRASR-QPDT 63 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 ++ + +LI L +Q EK+ Sbjct: 64 PQVRQAIKNQLIARVLIQQAAEKANYGSKPEVQ--------------------------- 96 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 Q + +K++ + + + ++ EY R ++ Sbjct: 97 ---TAMQVAKANAETQLYLKDNVKPEPVTDAQIKARYDEIVASLGKDEYKPRLIVVKDAA 153 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL---------LES 240 ++ +++ + G+ ++ + Sbjct: 154 TAATVLAELKA-----------GKPFDGLARQYSIAPSRDAGGELPWVSFKTPAAEGKTA 202 Query: 241 DLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTK 296 L L K P + + KR + +A + Q Sbjct: 203 GLPVAIAQALDKLPVGAVTPESIAVDNARAIVKLDAKRPTQVPTFNQAQATIHQQLEALA 262 Query: 297 IEKHEAEYVKKLRSNAIIH 315 +EK A++V L NA I Sbjct: 263 LEKASAQFVGGLLKNATIQ 281 >gi|221236099|ref|YP_002518536.1| peptidyl-prolyl cis-trans isomerase [Caulobacter crescentus NA1000] gi|220965272|gb|ACL96628.1| peptidyl-prolyl cis-trans isomerase [Caulobacter crescentus NA1000] Length = 323 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 38/323 (11%), Positives = 80/323 (24%), Gaps = 52/323 (16%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K L + + ++ C V+ K +NG+VI D+ + Sbjct: 1 MALKTSFRLMGVLGAVACALMIAS-CGQNKVAEKPPEPGDTAVARVNGQVIWASDVKREA 59 Query: 61 ALLKLQKINGELE------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 L L+ + + E+I + L E K + D Sbjct: 60 VAQGLISEGEPLDISSEVFRQRLDEVIDQKLLAAEAVKRKLDKDPLAQRRL--------- 110 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 + + +V+ + +Q+ + Sbjct: 111 ---------------------AAARERILGDMLVEGVVEKAVTEDAIRKLYAEQQKLSKR 149 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGK 233 E R +L ++ + ++ + G Sbjct: 150 SEEIRARQILVGSQAEAES-----------IKKLLATGASFDALAMERSTDQATRFNGGD 198 Query: 234 AQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292 Y + + L + P+ + G + + DKR E Q Sbjct: 199 LGYFTLDVMPEAYGAALKDAQKGALIGPFAAEGGWVLVKVEDKR--TEEPITLEAARPQI 256 Query: 293 TPTKIEKHEAEYVKKLRSNAIIH 315 + ++KLR +A + Sbjct: 257 IRFLTYDQVRDILEKLRGSAKVE 279 >gi|153837998|ref|ZP_01990665.1| peptidyl-prolyl cis-trans isomerse D [Vibrio parahaemolyticus AQ3810] gi|149748606|gb|EDM59465.1| peptidyl-prolyl cis-trans isomerse D [Vibrio parahaemolyticus AQ3810] Length = 459 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 17/212 (8%), Positives = 54/212 (25%), Gaps = 13/212 (6%) Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 A ++F + ++ + ++ + + ++ + Sbjct: 41 AEFAKKVELTDEEIQAYYKANPDNFTRPEQVKVSYVELSAEALKKQIQVTDEDVKKYYDE 100 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HD 228 + E R + + + + ++ + Sbjct: 101 HLDKYSSEEQRRVAHILVEGDDEAKAQAI-------LDELNAGADFAAVAQEKSDDFGSA 153 Query: 229 VSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIAL 284 + G ++ + P F+ K+ + + + G I + + +D + Sbjct: 154 ENGGDLGWIERDVMDPAFEEAAFALKNPGDMSGLVKSDFGYHIIKLEELKDAVAKPFDEV 213 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A + + K E +L A Y Sbjct: 214 AAEIKQELVDQKAVDQFYELQNELERVAF-EY 244 >gi|152984414|ref|YP_001350152.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas aeruginosa PA7] gi|150959572|gb|ABR81597.1| probable peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas aeruginosa PA7] Length = 314 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 27/245 (11%), Positives = 67/245 (27%), Gaps = 6/245 (2%) Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++A EL + ++ + + + + + L + + ++ Sbjct: 55 QVAPDELKALLAEVPAQTRAQLGENRDALERWMRARLAEKALYEQASAQDWQQRPEVKTL 114 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + + + + ++ + K L R I Sbjct: 115 IDAATRQIVLRTYLESVSTVPEDYPSDADLHDAYEANKAQLGVPALYRVSQIFIATATAG 174 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD--LHPQFQNLL 250 +KR ++ K++ + G LL L L Sbjct: 175 GPAEARKRAQELYRQAATG-DFAELARKYSDDPQTARNGGDIGGLLAQAQLLPAIRPALE 233 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + P G + + ++RD ++ L A + E+ Y+ L Sbjct: 234 RLKVGEVSEPIQGGNGFHLVKLTERRDPRLASLDEVRERLRASLRAQRQEQIAKAYLDGL 293 Query: 309 RSNAI 313 +NA Sbjct: 294 VNNAT 298 >gi|118594828|ref|ZP_01552175.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylophilales bacterium HTCC2181] gi|118440606|gb|EAV47233.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylophilales bacterium HTCC2181] Length = 627 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 46/394 (11%), Positives = 106/394 (26%), Gaps = 93/394 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ S + + ++I F + I SY S S+ +NG I+ Sbjct: 1 MLDKIRNSTDSKLAKVILAIIIIPFALFGIDSYLSSVGSNVYIAKVNGVDISAQQYQNTE 60 Query: 61 ALLKLQK----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---V 107 A+++ Q + E +K + LI L Q I+K+G + ++ + Sbjct: 61 AMIREQMTDPNTDPALFDSPEFKKAVLDNLISTELMNQSIDKNGFVISNEQLSSYIVGMP 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD--------------------- 146 N S E + + + + + Q Sbjct: 121 DFQENGKFSQERYDQIVQYNNLTPKKLEDRIRTQMATQQAKDSINRLIYVPNEITQPLVN 180 Query: 147 ------------VVKNDFMLKYGNLEMEIPANKQKMKNITVRE---------YLIRTVLF 185 + +D+ K + E+ + + + Y + ++ Sbjct: 181 LAYQKRDISLHEIRLDDYKKKIKPTDDEVKQFYDENTSNFIMPDRVKIEFLIYSVAGIVP 240 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL-------------------------- 219 +I + + + F E ++ R K Sbjct: 241 TISVSNEEARQFFDANKGKFEANQQRRAKHILFAYQPGIDFEEKARIRDLAQTTLNEIKK 300 Query: 220 ---------EKFASKIHDVSIG-KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVE 268 ++ + G + D+ F + + + + T+ G+ Sbjct: 301 SPKIFENKVKELSQDTESAKQGGDLGFFSRGDMVKPFADAVFGLKVDGLSGLVETEFGLH 360 Query: 269 YIAICDKR-DLGGEIALKAYLSAQNTPTKIEKHE 301 I + D + + +K + + K Sbjct: 361 IIKLTDIKGEQVSFDKIKTQIKGELLYGKALDQY 394 >gi|17546463|ref|NP_519865.1| isomerase rotamase signal peptide protein [Ralstonia solanacearum GMI1000] gi|17428761|emb|CAD15446.1| putative isomerase rotamase signal peptide protein [Ralstonia solanacearum GMI1000] Length = 255 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 65/277 (23%), Gaps = 48/277 (17%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 +NG I + I Q + EL A LI L +Q+ G Sbjct: 20 VNGHAIPSAKVDALIKK-SGQPESPELRNRARDMLIDRELIEQDATNRG----------- 67 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + Q Q+ +V +F N Sbjct: 68 -----------------------LLGRDDVQEQLAQARLNVLVAAEFEDYVKNSPTTDDD 104 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 +++ + I + + + + + Sbjct: 105 LRKQYEKIKAQFGNGKEYHAHHILVDKEADAKA------IIAKLKAGGNFEEIAKAQSKD 158 Query: 226 -IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDL--GG 280 + G + P+F L + T P TQ G I + D RD Sbjct: 159 KGSGANGGDLDWANPGTYVPEFSAALTGLKKGEVTQTPVKTQFGWHVIRLDDTRDAKIPA 218 Query: 281 EIALKAYLSAQNTPTK--IEKHEAEYVKKLRSNAIIH 315 +K L + +K LR A I Sbjct: 219 FEDVKPQLLEMMMGDQNWQRAKFQAMLKDLREKATIK 255 >gi|150019698|ref|YP_001311952.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium beijerinckii NCIMB 8052] gi|149906163|gb|ABR36996.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium beijerinckii NCIMB 8052] Length = 248 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 29/281 (10%), Positives = 78/281 (27%), Gaps = 38/281 (13%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 M +++ G IT+ D++ I+ ++ + ++L+ + + + + K G Sbjct: 1 MENKVLAVAAGYEITEKDLNAIISRYPQEQRGALQSEEKKKQLVEQLISFELMNKFGKEI 60 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + + + + N + Sbjct: 61 QLDKTQEYKDAMENISKEVITSMAI---------------------------NKVLSDVT 93 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + E+ + K + + + + N+ EE + Sbjct: 94 ITDEEVKKYYEDNKEAFGQPATVSARHILVETEEEANKA--------REEILSGKISFGD 145 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276 K+++ + G + + P+F+ T P TQ G + + K Sbjct: 146 AAMKYSTCPSNQQGGNLGEFSKGMMVPEFEEAAFTSEIGKVTEPVKTQFGYHLVLVDAKN 205 Query: 277 DL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +K + K + +K+L + + Sbjct: 206 EASIKSFEEVKDSVLDNLIKENQHKKYDQILKELEAKYGVE 246 >gi|309781979|ref|ZP_07676709.1| peptidyl-prolyl cis-trans isomerase family protein [Ralstonia sp. 5_7_47FAA] gi|308919045|gb|EFP64712.1| peptidyl-prolyl cis-trans isomerase family protein [Ralstonia sp. 5_7_47FAA] Length = 265 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 36/279 (12%), Positives = 65/279 (23%), Gaps = 46/279 (16%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +NG+ I + I Q + EL A L+ L +Q+ K G+ Sbjct: 27 AAVVNGKAIPSAKVDALIKK-SGQPESPELRARARDMLVDRELIEQDAAKRGL------- 78 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + + + ++ + Sbjct: 79 -----------------------LERDDIQEQLAAARLNVLVAAEFEDYVKNSPATEDEL 115 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + + + K E+ + Sbjct: 116 HKQYDKIKAQFGNGKEYHAHHILVDKEGDAKAIIAKLKAGAKFEDI---------AKAQS 166 Query: 223 ASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDL-- 278 K + G + P+F L + T P TQ G I + D RD Sbjct: 167 KDKGSGANGGDLDWANPGTYVPEFSAALTGLKKGQITQTPVKTQFGWHVIRLDDTRDAKI 226 Query: 279 GGEIALKAYLSAQNTPTK--IEKHEAEYVKKLRSNAIIH 315 +K L + +K LR A I Sbjct: 227 PSYEDVKPQLLEMMMGDQNWQRSKFQAMLKDLREKAKIQ 265 >gi|302873039|ref|YP_003841672.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium cellulovorans 743B] gi|307688832|ref|ZP_07631278.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium cellulovorans 743B] gi|302575896|gb|ADL49908.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium cellulovorans 743B] Length = 247 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 26/280 (9%), Positives = 86/280 (30%), Gaps = 39/280 (13%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 +++ + + IT+ +I++ I + Q+ + L+ E + + + Sbjct: 3 NKVLAVVKNKEITEQNINELIVRMPDQQRMYYDTEQGRARLLEELVSVEVFYNYALELKL 62 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + F + Q ++P + ++ Sbjct: 63 DESPAFL--------------------------EQLEGAKRQMLFP-IAADEVTKDVEIA 95 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + ++ + + + + L +++ ++ + + Sbjct: 96 DQDVADFYKNNRELFKKPELATASHIL---------VDSEEKAQEIKAEIEAGLSFADAA 146 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD- 277 K+++ + G + + P+F+ + N ++P TQ G I + D + Sbjct: 147 AKYSTCPSNQRGGDLGQFQKGQMVPEFEEVAFTLPINKLSDPVKTQFGYHLIKVTDFQPE 206 Query: 278 -LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++ + + + + E V +L+ + Y Sbjct: 207 MIQDFDEVQVAIKEKMLQDRRQYKFLEKVDELKKLYNVEY 246 >gi|299066760|emb|CBJ37954.1| Putative Peptidylprolyl isomerase; exported protein [Ralstonia solanacearum CMR15] Length = 265 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 38/276 (13%), Positives = 66/276 (23%), Gaps = 46/276 (16%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 +NG I + I Q + EL A LI L +Q+ K G+ Sbjct: 30 VNGHAIPSAKVDALIKK-SGQPESPELRNRARDMLIDRELLEQDATKRGL---------- 78 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + + + ++ + Sbjct: 79 --------------------LERDDVQEQLAQARLNVLVAAEFEDYVKNSPTTDDDLRKQ 118 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 ++ + + + + K + EE + K Sbjct: 119 YEKIKAQFGNGKEYHAHHILVDKEADAKAIIAKLKAGGNFEEI---------AKAQSKDK 169 Query: 226 IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDL--GGE 281 + G + P+F L + T P TQ G I + D RD Sbjct: 170 GSGANGGDLDWANPGTYVPEFSAALTGLKKGEVTQTPVKTQFGWHVIRLDDTRDAKIPAF 229 Query: 282 IALKAYLSAQNTPTK--IEKHEAEYVKKLRSNAIIH 315 +K L + +K LR A I Sbjct: 230 EDVKPQLLEMMMGDQNWQRAKFQTMLKDLREKATIK 265 >gi|229043011|ref|ZP_04190742.1| Foldase protein prsA 2 [Bacillus cereus AH676] gi|228726351|gb|EEL77577.1| Foldase protein prsA 2 [Bacillus cereus AH676] Length = 285 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 27/304 (8%), Positives = 76/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT + K++ K Sbjct: 4 KHIFIITALISILMLSACGQKNGSATVATATDSTITKDNFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + + + + F ++ Sbjct: 56 LYEMMAQDVITKKYKVPDEEVNKEVE-----------KVKKQYGDQFKKVLENYGLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSITEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ + ++ + + G Y + P+F+ K + Sbjct: 145 SDENEAKEIKSKLDAGASFEELAKQESQDLLSKDKGGDLGYFNSGTMAPEFETAAYKLNV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+ L +K + + + +++ A Sbjct: 205 GQISNPVKSSNGYHVIKLTDKKALKPYDEVKDSIRKNLEEERTADPVFSKKLLQEELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|222529840|ref|YP_002573722.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor bescii DSM 6725] gi|222456687|gb|ACM60949.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor bescii DSM 6725] Length = 340 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 27/299 (9%), Positives = 88/299 (29%), Gaps = 23/299 (7%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL----------------IVET 84 R+ +NGE +T + R LK I + ++ I+ Sbjct: 36 RVVLEVNGEQVTKREYKIRFNALKENAIQFSSRTDILDQVFNGKTYRELLKDELFTILTE 95 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 E + ++ + E+ + ++ + + + Sbjct: 96 ELLCLQEARKRNINLTKQEEEEIKKYIQELKANEEMRGYFNQYLRKIDSDENHFYRDLYK 155 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 ++ + + + + + + + ++ Sbjct: 156 TRLINKLYSSITSKTTVSDSEIVNYYNTNKNQFKKRKIIDIFLKVENEEEDARKREIANK 215 Query: 205 AEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQF-----QNLLKKSQNNTT 258 + ++K++ + G Y + + ++ + + K + + Sbjct: 216 IVSELKKGENFEKLVKKYSEDDSASTTKGIIDYFRKGEKEAEYGSVFEEEVFKLAVGQIS 275 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 N T KG + + D++ + + +K + ++ K ++ Y++ L+ + I+ Y Sbjct: 276 NVIKTVKGYHIVKVLDEKYMPLDE-VKEEIQSKLMKQKKDEAFRLYIENLKKLSKINVY 333 >gi|330836446|ref|YP_004411087.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta coccoides DSM 17374] gi|329748349|gb|AEC01705.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta coccoides DSM 17374] Length = 354 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 39/346 (11%), Positives = 92/346 (26%), Gaps = 46/346 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKLQKINGEL 72 + +F+++ + + + +S +N VIT ++ ++ + Sbjct: 6 VRKFFIMVSIAVCAAGTLAAAVISQP-AAVVNLTKNTVITTEQLNAKVKEYQEAAATAGT 64 Query: 73 EK----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS------AEDFSS 122 ++ +I + L Q + GI V+ V + F Sbjct: 65 AAPDALRVLEIMINDELVMQGSARDGIVITDAQVSQLVVDQKQTLEQQYGVTLTDAQFQQ 124 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKN----DFMLKYGNLEMEIPANKQKMKNITVREY 178 + Q F++ L Q + V+ + EI + ++ ++ Sbjct: 125 AVTAQFGSMEAFRKALKEQLLVDTYVRKAKSDVIAQVKQPTDTEISSFFRQRRSEFFSPE 184 Query: 179 LIRTVLFSIPDN-----KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIG 232 IR IP + N I R ++ ++ G Sbjct: 185 SIRLSHVFIPFAEGTDAQKTNDANKATLISLVSSIRSGSLTFEKAVQDYSQDAASRQLGG 244 Query: 233 KAQYLLESDLH-------PQFQNLLKKSQNNTTNPYVTQKGVEYIA-----------ICD 274 +L + + +N + G + + D Sbjct: 245 SIGWLTADNSDVVASLGQGFYDAAFALEVGQISNVVESASGYHILKSVSHLDAKMLGLDD 304 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHE----AEYVKKLRSNAIIHY 316 + + ++ Y+ + ++ LRS A I Sbjct: 305 TINPETTVTVREYIRQYLLAQNQQTAYVNAVNALIQDLRSLANIRI 350 >gi|315635801|ref|ZP_07891063.1| peptidyl-prolyl cis-trans isomerase [Arcobacter butzleri JV22] gi|315479780|gb|EFU70451.1| peptidyl-prolyl cis-trans isomerase [Arcobacter butzleri JV22] Length = 269 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 91/299 (30%), Gaps = 42/299 (14%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKINGELEKIAVQE 79 ++ + I + + T+NGE IT DI+ + + K+ E + +++ Sbjct: 4 IVSSLVASIALATALNAADVSYATVNGENITKQDIAMALQDPRVDFDKLPQEAKTQILEQ 63 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 ++ L Q G+ D+ V Sbjct: 64 IVNMKLIAQHAIDDGVEKDAKYVEA-------------------------------MKKI 92 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 ++ +V + + + K E + +K K V + + Sbjct: 93 KSNLALEVWQKNEIDKIKVTEADKKDFYEKNKEKFVEPETFEASHILVKTE-----AEAK 147 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT- 258 I +++ ++ K +K + G + P+F + +K T Sbjct: 148 DIISQLDKASNKVEKFKELSKKSLDTASAKNGGALGRFAVEQMVPEFGSAVKALAKGTYS 207 Query: 259 -NPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P TQ G I + DK ++ ++ + K E V+ LR +A I Sbjct: 208 KTPVKTQFGYHVIYLKDKFPSKTFAYTEVEKNINQVLIGNALNKKIKELVEDLRKDAKI 266 >gi|307244093|ref|ZP_07526212.1| putative peptidylprolyl isomerase PrsA1 [Peptostreptococcus stomatis DSM 17678] gi|306492617|gb|EFM64651.1| putative peptidylprolyl isomerase PrsA1 [Peptostreptococcus stomatis DSM 17678] Length = 353 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 91/309 (29%), Gaps = 22/309 (7%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK-------- 67 + +++ +V + + + +++G+ I+ + +++ KL Sbjct: 1 MKKVLAILLAAVVGLSTVACSSDD---VASVDGKGISKKEYIEQLKFTKLMYEMQYGDKI 57 Query: 68 ------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 N E ++ + ++ +K + + Q+ + + E+ Sbjct: 58 WDQMKSQNKEYQETVKKNVLQSMVKSRVYLSYAEKNNVKPDEKVLSQYKKKNKEAFENAK 117 Query: 122 SFLDKQGIGDNHFKQYLAIQSI--WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + + G + + ++ E + + + L Sbjct: 118 AKEKFEKAGIDQAFMDKYSEQAATMTSLLNFLQKKAMPTEEEVKAKFETEGDKLDASHIL 177 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238 I+TV + + + +K+ +D + +K + G Sbjct: 178 IKTVDDNNKPLSDEKKAEAKKKAEDLLKQLKSGTDFAELAKKNSQDPGSAAKGGALGEFG 237 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +F+ + + TQ G I + KR K + KI Sbjct: 238 KGQMVSEFEKAAFALKEGEISPIVETQFGYHIIKLN-KRVKADYEKSKDKIKTSLINEKI 296 Query: 298 EKHEAEYVK 306 +K E VK Sbjct: 297 KKLVDEIVK 305 >gi|282880885|ref|ZP_06289578.1| PPIC-type PPIASE domain protein [Prevotella timonensis CRIS 5C-B1] gi|281305267|gb|EFA97334.1| PPIC-type PPIASE domain protein [Prevotella timonensis CRIS 5C-B1] Length = 489 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 34/290 (11%), Positives = 81/290 (27%), Gaps = 20/290 (6%) Query: 33 YKSWAMSSRIRTTINGEVITDGDIS-------KRIALLKLQKINGELEKIAVQELIVETL 85 ++ + + E I D+ K E IAVQ+L + Sbjct: 44 MPENSVIDEVIWVVGDEPIMKSDVEMTRLQSEAEGVKFKGNPDYSIPEHIAVQKLFLHQA 103 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + +E ++ + G SAE ++ + + ++ Sbjct: 104 ELDSVEIPEAQVTASIERQ-INRWIEMAGGSAERLEAYRGQTISQMRSQLRDDFRNNLLV 162 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 ++ + ++ A + + ++ + I + + + Sbjct: 163 QNMQEKLVQDVKVTPSDVRAYFKDLPADSIPFVPTEVEVEIITRKPKILPEEINRVKNEL 222 Query: 206 EESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKKSQN--NTT 258 R+ A G+ Y+ L P F N+ + + Sbjct: 223 RNFTNRVTSGETSFATLARLYSEDPGSARQGGEMDYMGRGMLDPDFANVAFNLTDPKKIS 282 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 T+ G I + DKR G+ ++ P ++ + + +L Sbjct: 283 KIVETEFGYHIIQLIDKR---GDKIKVRHIL--LKPKVSDEEVQKVLVRL 327 >gi|145588566|ref|YP_001155163.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046972|gb|ABP33599.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 279 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 92/315 (29%), Gaps = 48/315 (15%) Query: 9 LSDFIKLLT---TYFVLIIFCIVPIVSYKSWAMSSRI--RTTINGEVITDGDISKRIALL 63 + I L + + S + I ++NG +IT+ + + I + Sbjct: 1 MKLLISRLKPSVAQLITSSILLGCFGSAFAQQSGLPINAAASVNGAIITNDMVEQGIKVA 60 Query: 64 KLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 Q EL K +Q+ + L Q+ EK G+ A Sbjct: 61 ISQGQKDSPELRKAVIQKFVEVMLLSQQAEKDGLA----------------NSEKANSQL 104 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 + + + + D ++A I V+ ++ + +L + Sbjct: 105 ALIRQNYLADLELSTFMAQNPITDADVQAEYNREVSSLGPQG------------------ 146 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + + A + + + + G A ++ Sbjct: 147 ---MITEYKISDIAVATEAEAQAALDRIKKGEPFDKVARSVSLGPNKAQGGAAGWVQPGQ 203 Query: 242 LHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 + PQ ++L + P Q+G + + DK+ I+K Sbjct: 204 VPPQIGSVLATLGKGQVCSAPIQMQQGWYLVKVEDKKSSKP--PTFEQAKQAVRAGLIQK 261 Query: 300 HEAEYVKKLRSNAII 314 + E+V K+ ++ I Sbjct: 262 KQYEFVAKIAKDSKI 276 >gi|257093852|ref|YP_003167493.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046376|gb|ACV35564.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 635 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 32/382 (8%), Positives = 82/382 (21%), Gaps = 94/382 (24%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR-------------IAL 62 + + + F + SY + + ++ IT + Sbjct: 15 VFLALITLPFAFWGVDSYVRNSGAGTDLASVGDSKITRPQFDQAWRVQQDRMRQVLGANF 74 Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAED 119 E + + L+ + L E K + + + N S Sbjct: 75 RPESMNTPEAKLAVLNSLVDQRLLLIEAAKDRLAVGDDLLREVIGKIPALQENGQFSLAR 134 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------------------------- 150 + + L QG+ + F+ + +V Sbjct: 135 YRAVLAAQGMSQSQFEAQVRQDLTLQQLVAAIGDTGIASTTTADAMLRIQSEERQVAELR 194 Query: 151 ----DFMLKYGNLEMEIPANKQKMKNITVREYLIR-------------------TVLFSI 187 F+ + + N + + Sbjct: 195 FSPDQFLERVQVDPAAVRKFYDDNANRFEIAEQAKAEFVVLSLDGLLEKAKVSDAEVTGW 254 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--------------------- 226 ++ ++R D K A ++ Sbjct: 255 YESHKDRYQQPEERRASHILILANADVDREKARAKAEEVLKEIQKSPGRFAELAKQHSQD 314 Query: 227 --HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGE 281 G + + F++ K +N + ++ G I + + Sbjct: 315 PGSAEKGGDLGFFGRGMMVKAFEDTVFKAQENEVSGLVQSEFGYHIIKVTGIKVGTQRAL 374 Query: 282 IALKAYLSAQNTPTKIEKHEAE 303 + ++ + A+ + AE Sbjct: 375 VDVRPEIEAELKRQAASRQFAE 396 >gi|16127297|ref|NP_421861.1| peptidyl-prolyl cis-trans isomerase family protein [Caulobacter crescentus CB15] gi|13424717|gb|AAK25029.1| peptidyl-prolyl cis-trans isomerase family protein [Caulobacter crescentus CB15] Length = 314 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 76/303 (25%), Gaps = 51/303 (16%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE------K 74 ++I C V+ K +NG+VI D+ + L L+ + Sbjct: 11 LMIASCGQNKVAEKPPEPGDTAVARVNGQVIWASDVKREAVAQGLISEGEPLDISSEVFR 70 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E+I + L E K + D Sbjct: 71 QRLDEVIDQKLLAAEAVKRKLDKDPLAQRRL----------------------------- 101 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + + +V+ + +Q+ + E R +L Sbjct: 102 -AAARERILGDMLVEGVVEKAVTEDAIRKLYAEQQKLSKRSEEIRARQILVGSQAEAES- 159 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF-QNLLKK 252 ++ + ++ + G Y + + L Sbjct: 160 ----------IKKLLATGASFDALAMERSTDQATRFNGGDLGYFTLDVMPEAYGAALKDA 209 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + P+ + G + + DKR E Q + ++KLR +A Sbjct: 210 QKGALIGPFAAEGGWVLVKVEDKR--TEEPITLEAARPQIIRFLTYDQVRDILEKLRGSA 267 Query: 313 IIH 315 + Sbjct: 268 KVE 270 >gi|218234193|ref|YP_002367583.1| peptidylprolyl isomerase [Bacillus cereus B4264] gi|218162150|gb|ACK62142.1| foldase protein PrsA [Bacillus cereus B4264] Length = 280 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 86/305 (28%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + V+ + +S + S I TT +G I++ D +K++ K Sbjct: 1 MKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGK 51 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E D Sbjct: 52 QNLSEMVVEKVLHDKYKVTDEEVT---------------KQLKELKDKMGDNFNTYMESN 96 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + V L++ Sbjct: 97 GVKNEDQLKEKLKLTFAFEKAIKATVTEKDIKDHYKPKLQVSHILVK------------- 143 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G+ + +F++ K Sbjct: 144 ---DEKTAKEIKEKLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 200 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + DK++L K + + +I+ + + ++L Sbjct: 201 EVGQLSEPVKSSFGYHIIKLMDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRELLK 260 Query: 311 NAIIH 315 NA I Sbjct: 261 NADIK 265 >gi|312792832|ref|YP_004025755.1| ppic-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179972|gb|ADQ40142.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 339 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 38/322 (11%), Positives = 94/322 (29%), Gaps = 24/322 (7%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI----- 60 + + VL+I I + +R +NGE IT + + Sbjct: 1 MDKRTKIVLFSIAAVVLLIILIAVTPEIVRYVDENRAVAIVNGEKITKKEFAINYRSQIN 60 Query: 61 ----------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 + + ++++ + LI+ ++ Q+ K IT S Q Sbjct: 61 YYGLDKAFLSQKVGDKTYEQQIKENVLDGLIIRQIELQQARKRNITLSSAEKKAIDQQIE 120 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + S + + Q I +V + N + + Sbjct: 121 QYKSDSQSGAEF--KQYLQTIGATENEYKDQVIKSQIVSKLYDEVTKNQKASDAEIESYY 178 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDV 229 + ++ N + + +K+ ++ + +K++ Sbjct: 179 NSHKSDFVEVKASHILFKVNDSKEEAAKKKKAEEILQMIKVGQNFEKLAQKYSEDETTKQ 238 Query: 230 SIGKAQYLLESDLHPQFQNLLKKS-----QNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 G YL ++ + + N + +N T G I + D++ L + Sbjct: 239 KGGDMGYLRKNIIIQYYGNEFGNAVFSLGIGEISNIVQTNDGFHIIKVTDRKQLLL-SDV 297 Query: 285 KAYLSAQNTPTKIEKHEAEYVK 306 K + + K +++ ++ Sbjct: 298 KDEIKSTIESQKKDEYYQSLLE 319 >gi|209965938|ref|YP_002298853.1| peptidyl-prolyl cis-trans isomerase family protein, putative [Rhodospirillum centenum SW] gi|209959404|gb|ACJ00041.1| peptidyl-prolyl cis-trans isomerase family protein, putative [Rhodospirillum centenum SW] Length = 315 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 29/283 (10%), Positives = 74/283 (26%), Gaps = 47/283 (16%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGE---LEKIAVQELIVETLKKQEIEKSGIT 96 + + +NG+ I ++ + L Q + +++++ L Q K + Sbjct: 47 NPVVARVNGKEIRRTEVLAALQQLPPQVQQLPLPMVYPAVLEQVVNAHLVTQAGFKDKLQ 106 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 + + + + +K K Sbjct: 107 DTTEVK------------------------------QRLKAAEERFVQEAFLKKAIDAKM 136 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + ++ ++ +N E R +L + ++ + Sbjct: 137 SDALVKKKFDEWLKENPPQDEVRARHILVQTKEEAEALIKQIK----------GGADFNK 186 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICD 274 ++ G Y + + F + + + P TQ G I + D Sbjct: 187 LAADQKIDTAAAQQQGDLGYFTKDQMVEPFAKAAFAMKPGDVSQTPVETQFGWHVIKVED 246 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 KR + + + + V+ LR A + + Sbjct: 247 KRKQTP--PTYEEAAPELRQVVAQDIAGDVVEGLRKQAKVEMF 287 >gi|222149929|ref|YP_002550886.1| peptidyl-prolyl cis-trans isomerase [Agrobacterium vitis S4] gi|221736911|gb|ACM37874.1| peptidyl-prolyl cis-trans isomerase [Agrobacterium vitis S4] Length = 291 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 29/284 (10%), Positives = 70/284 (24%), Gaps = 48/284 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLK---LQKINGELEKIAVQELIVETLKKQEIEKSG 94 + + I ++ IA L Q + + + A+ I L Sbjct: 24 ADDAVVAKVGTLEIHQSELDLAIANLDPQFAQMPDDQKKVAALSGAIDVKLLAGSAIGEK 83 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 + D ++A + + K + Sbjct: 84 MQDDPAYK------------------------------QRMAFIADRELHNAFFKKHVVD 113 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + E++ K+ +E R +L D + Sbjct: 114 VTTDEEVKARYEKEIAALPKEQEIHARHILVKTEDEAKDVIKQLDA-----------GKD 162 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAI 272 ++ ++ G + + + P+F+ T P +Q G I + Sbjct: 163 FAELAKEKSTDSSGSDGGDLGFFSKGRMVPEFEEAAFALKPGTYTKTPVKSQFGFHVIKV 222 Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + RD + Q + ++K +++ + Sbjct: 223 EEIRDAAP--PKFEDVQQQVRQLVMRDKYLALLEKAKTSEKVEI 264 >gi|326622155|gb|EGE28500.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 611 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 35/360 (9%), Positives = 88/360 (24%), Gaps = 84/360 (23%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQKING----------------ELEKIAVQEL 80 S+ +NG+ I+ + + L + + L Sbjct: 24 GGSNNYAAKVNGQGISRAQFENAFNNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRL 83 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQY 137 I E L Q + + V +++ +++ G+ + + Q Sbjct: 84 IDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYAQA 143 Query: 138 LAIQSIWPDVVK---------------------------------NDFMLKYGNLEMEIP 164 L Q ++ N K + E+ Sbjct: 144 LRNQLTTQQLINGVAGTDFMLKGETDELAALVSQQRVVREAVIDVNALAAKQQVTDQEVS 203 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE----------------- 207 + + K + R + +Q ++ Sbjct: 204 SYYDQNKVRFMTPEQFRVSYIKLDAATMQAPVSDADIQAYYDQHVDQFTQPERIRYSIIQ 263 Query: 208 ------------SRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 + + ++ ++ I + G +L ES P+ +N K + Sbjct: 264 TKTEDDAKAVLDALNKGEDFATLAKEKSTDIISARNGGDMGWLEESATVPELKNAGLKEK 323 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + G + D + + ++ ++A+ K +K+ A Sbjct: 324 GQISGVIKSSVGFLVARLDDIQPAKVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAA 383 >gi|107103386|ref|ZP_01367304.1| hypothetical protein PaerPA_01004456 [Pseudomonas aeruginosa PACS2] gi|296387613|ref|ZP_06877088.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas aeruginosa PAb1] gi|313109291|ref|ZP_07795259.1| putative peptidyl-prolyl cis-trans isomerase [Pseudomonas aeruginosa 39016] gi|310881761|gb|EFQ40355.1| putative peptidyl-prolyl cis-trans isomerase [Pseudomonas aeruginosa 39016] Length = 272 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 21/183 (11%), Positives = 67/183 (36%), Gaps = 5/183 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-RTVLFSIPDNKLQNQGFV 198 ++ +++ + + + + + L R VL + + L+ + Sbjct: 79 EEARIRQLLEEEVQVPEADEDACRTWYAANPGRLLGPWRLQLRHVLLACAPDDLEGRETA 138 Query: 199 QKRIKDAEESRLRLPKDC-NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257 +K+ + + P+ + +F++ + G ++ P+F+ L + Sbjct: 139 RKQAAELLDELRGHPERFVDLARRFSACPSKEAGGDLGWIEPGQTVPEFEKRLLRRAPGL 198 Query: 258 TN-PYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P ++ G+ + + + + A +A ++A +++ +Y+ L +A I Sbjct: 199 LEHPLESRYGLHVVELLAREGGEPLDFDAARAQIAAHLQAQVLQRAVGQYIGVLAGDACI 258 Query: 315 HYY 317 + Sbjct: 259 EGF 261 >gi|254236772|ref|ZP_04930095.1| hypothetical protein PACG_02782 [Pseudomonas aeruginosa C3719] gi|126168703|gb|EAZ54214.1| hypothetical protein PACG_02782 [Pseudomonas aeruginosa C3719] Length = 272 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 21/183 (11%), Positives = 67/183 (36%), Gaps = 5/183 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-RTVLFSIPDNKLQNQGFV 198 ++ +++ + + + + + L R VL + + L+ + Sbjct: 79 EEARIRQLLEEEVQVPEADEDACRTWYAANPGRLLGPWRLQLRHVLLACAPDDLEGRETA 138 Query: 199 QKRIKDAEESRLRLPKDC-NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257 +K+ + + P+ + +F++ + G ++ P+F+ L + Sbjct: 139 RKQAAELLDELRGHPERFVDLARRFSACPSKEAGGDLGWIEPGQTVPEFEKRLLRRAPGL 198 Query: 258 TN-PYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P ++ G+ + + + + A +A ++A +++ +Y+ L +A I Sbjct: 199 LEHPLESRYGLHVVELLAREGGEPLDFDAARAQIAAHLQAQVLQRAVGQYIGVLAGDACI 258 Query: 315 HYY 317 + Sbjct: 259 EGF 261 >gi|121604540|ref|YP_981869.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas naphthalenivorans CJ2] gi|120593509|gb|ABM36948.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas naphthalenivorans CJ2] Length = 645 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 23/204 (11%), Positives = 54/204 (26%), Gaps = 11/204 (5%) Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 +A + D + +Q + E ++ Sbjct: 201 DYAAKLTPTDADLEQYYKANEKLFQAPEQASIEYVLLDL---EALKKGIAVNEADLKTYY 257 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 ++ R I +K + +K AEE + K A K Sbjct: 258 EQNARQLSGTEERRASHILITASKTASPEEREKAKTKAEELLATVKKSPENFADVARKNS 317 Query: 228 -----DVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR--DLG 279 + G + + F++ ++ + + + G I + D + Sbjct: 318 QDPGSATNGGDLDFFARGAMVKSFEDAAFSMNKGDISEVVASDFGYHIIKLTDIKAPKQR 377 Query: 280 GEIALKAYLSAQNTPTKIEKHEAE 303 ++ L A+ + +K +E Sbjct: 378 TFEEMRPQLEAELQKQQAQKKFSE 401 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 24/233 (10%), Positives = 62/233 (26%), Gaps = 22/233 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58 M + + LL ++ F +V + S S + ++G IT + + Sbjct: 1 MFDFIRKHTKWTMALLFL-LIVPSFILVGMNSNPSSEKG-GVVAKVDGTEITQPEWDREH 58 Query: 59 --RIALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + L+ + E ++ ++ + + EK ++ + Sbjct: 59 LKEVDRLRASMPTLDAKLLDSPEARYATLERMVRDRVVAVAAEKLKLSTSDQHLARELQN 118 Query: 109 -------HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML-KYGNLE 160 + L + + L QG+ F+ + V+ N Sbjct: 119 SPEIAALRRADGSLDMDRYRQLLGTQGMSPEMFEANVRTDLSRRQVLAGVSGSGFASNSA 178 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 ++ N K + + K + ++ + Sbjct: 179 ADMALNAYFEKREIQLARFNAADYAAKLTPTDADLEQYYKANEKLFQAPEQAS 231 >gi|229016515|ref|ZP_04173456.1| Foldase protein prsA 2 [Bacillus cereus AH1273] gi|229022723|ref|ZP_04179247.1| Foldase protein prsA 2 [Bacillus cereus AH1272] gi|228738535|gb|EEL89007.1| Foldase protein prsA 2 [Bacillus cereus AH1272] gi|228744782|gb|EEL94843.1| Foldase protein prsA 2 [Bacillus cereus AH1273] Length = 269 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 32/291 (10%), Positives = 78/291 (26%), Gaps = 43/291 (14%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 ++S S T IT D K++ K + E++ + + ++ Sbjct: 1 MLSACGQKNDSATIATTTNSTITKSDFEKQLK--------DRYGKDMLYEMVAQDVITKK 52 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 + S D + ++ + + + F+ + + + +K Sbjct: 53 YKVSDDAVDKEVE-------KAKNQYGDQFKAALENNRLKDEKDFQDQIRFKLALNEAIK 105 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 K + + K+ ++ Sbjct: 106 QSVTEKDIKD------------------------HYKPEIKASHILVSDENEAKEIKKKL 141 Query: 210 LRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 ++ + + + G Y + P+F+ K +NP + G Sbjct: 142 DTGASFEELAKQESQDSLSKDNGGDLGYFRAGKMTPEFEKAAYKLKPGQISNPVKSPNGY 201 Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAIIHY 316 I + DK+DL +K + +I + ++ A I Sbjct: 202 HIIKLTDKKDLEPYDEVKGSIRKDLEEERIADPSFGQKLLQDELKKADIKI 252 >gi|116619198|ref|YP_821354.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Solibacter usitatus Ellin6076] gi|116222360|gb|ABJ81069.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Solibacter usitatus Ellin6076] Length = 644 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 31/262 (11%), Positives = 78/262 (29%), Gaps = 7/262 (2%) Query: 56 ISKRIALLKLQKINGELEKIAVQELI-VETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 I + A LK Q IA++ I + +K V ++ + Sbjct: 144 IDQFEADLKRQVAISRFRDIAMEGTIVTPAEIEAAFKKKNEKIKVEWVKLTADKYKGESQ 203 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 SA++ F ++ + K L + +++ ++ K T Sbjct: 204 PSAQELQDFYKANVSRYTVPEKRNLTVLTADEA-KMSASLNITDADLQRVYDQNKEAFRT 262 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGK 233 R +L + ++ + + + ++ + V+ G Sbjct: 263 PERVKARHILLKTQGKPASEEAAIKAKGESLLKQIKAGGDFAKLAKENSEDPGSAVNGGD 322 Query: 234 AQ-YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 ++ + +F + + ++ TQ G + K+D G A + Sbjct: 323 LGDWITHGQMVAEFDKAIFALKPGEVSDLVKTQYGYHIVQTLAKQDAGMRT--FAEVKGD 380 Query: 292 NTPTKIEKHEAEYVKKLRSNAI 313 ++ +E +++ A Sbjct: 381 LATQYKKQRVSELMQQASDRAQ 402 Score = 41.6 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 86/317 (27%), Gaps = 25/317 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPI----VSYKSWAMSSRIRTTINGEVITDGDISKRI 60 +F S +++L + ++ + + S + I + IT ++ + I Sbjct: 4 LFRSRDKMVRILLGALLGVVALSMLTYLVPNYNTGSSTSDVVVAEIGKDTITLPEMQRVI 63 Query: 61 ALL--KLQKINGELEK---IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 Q L V +++ E E E+ G V Q + Sbjct: 64 QATIRGRQLPTEILPTYIPQMVDQMVTERAMAMEAERLGYQVSDADVADSIRQMVPSLFP 123 Query: 116 S-----AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 E +++ L +Q + + F+ L Q A K+K Sbjct: 124 DGKFVGKETYAAMLAQQNMTIDQFEADLKRQVAISRFRDIAMEGTIVTPAEIEAAFKKKN 183 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 + I V + + + + + + A ++ Sbjct: 184 EKIKVEWVKLTADKYKGESQPSAQELQDFYKANVSRYTVPEKRNLTVLTADEAKMSASLN 243 Query: 231 IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 I Q + +++ P + + + E A+KA + Sbjct: 244 ITD----------ADLQRVYDQNKEAFRTPERVKAR-HILLKTQGKPASEEAAIKAKGES 292 Query: 291 QNTPTKIEKHEAEYVKK 307 K A+ K+ Sbjct: 293 LLKQIKAGGDFAKLAKE 309 >gi|221067844|ref|ZP_03543949.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas testosteroni KF-1] gi|220712867|gb|EED68235.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas testosteroni KF-1] Length = 632 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 42/405 (10%), Positives = 99/405 (24%), Gaps = 102/405 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58 M + S F+ +L ++ F V + + + SS+ ++G IT D Sbjct: 1 MFESIR-KHSKFVMILLFLLIIPSFIFVGV-NQNYFTESSQTVARVDGHDITQQDWDNAH 58 Query: 59 --RIALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 L+ Q + E +++L+ + + K +T + + Sbjct: 59 RAESDRLRAQNPSMDAKLLDSPEARYATLEKLVRDRVLAAAATKMHLTTPDAQLVRTLRE 118 Query: 109 -------HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + L AE + + + QG+ F+ L + V+ Sbjct: 119 IPAIASLQKPDGSLDAEAYKALVGSQGMTPEGFEANLRRELALNQVLGAVSSTSFTTAAQ 178 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVR------------ 176 F K E E+ A + + + Sbjct: 179 LQQAMDALYQRREIQVARFDASAFAGKVQPTEAELKAFYESHTSQFKQPEAATVEYVQLD 238 Query: 177 -----------------EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK- 218 Y + P+ + + + R + + Sbjct: 239 LATVEKSIVLSEDDLRTYYKENAARLAGPEERRASHILINAAKDLPAAEREKAKAKAEQL 298 Query: 219 ----------LEKFASKIH-----DVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYV 262 + A + G Y + F+ + K Q + ++ Sbjct: 299 LAQVRKDPKSFAQVAKANSQDPGSAANGGDLGYFGRDAMVKPFEEAVFKMKQGDISDVVE 358 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + G I + + + + ++ + Sbjct: 359 SDFGFHIIELTGIKQPKV--PTFEEMRPKLEADLKQQQAQRKFAE 401 >gi|152980819|ref|YP_001354064.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Janthinobacterium sp. Marseille] gi|151280896|gb|ABR89306.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Janthinobacterium sp. Marseille] Length = 307 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 22/312 (7%), Positives = 68/312 (21%), Gaps = 28/312 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M S + +L + T +++ ++ + S A ++ + I +I++ Sbjct: 1 MKSNINQALPG----VRTAIGVLLASVMGM-SAAQSAAPDKVVASAGSVTIGQNEITR-- 53 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LQ + + ++ A++ G Sbjct: 54 ---LLQGMPEAERAAIKNN----------RAGVENWLRQRVTSEALLREAQSKGWGERPE 100 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + V + + Sbjct: 101 VKAKVDAAAREVTARIVSTSYLESVAQVPATYPSDAEVKAAYEQGKANFNLPAS----YR 156 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 ++ + ++ R + G+ L Sbjct: 157 VAQIYLASTGTDAAATTKLRDEAKKLATQARGGDFAALARSRSQDPRSAERGGEVGMLPL 216 Query: 240 SDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTK 296 + + K + P + G + + + + +K L + Sbjct: 217 EQMLPEVRDAVAKLKVGQVSEPVQSPSGFHIVKLLETQPARTATLEEIKPRLQTALRDQR 276 Query: 297 IEKHEAEYVKKL 308 ++ ++ L Sbjct: 277 QQQLIQAHMAGL 288 >gi|228939979|ref|ZP_04102553.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972874|ref|ZP_04133469.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228979455|ref|ZP_04139787.1| Foldase protein prsA 1 [Bacillus thuringiensis Bt407] gi|228780273|gb|EEM28508.1| Foldase protein prsA 1 [Bacillus thuringiensis Bt407] gi|228786747|gb|EEM34731.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228819591|gb|EEM65642.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 303 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 85/305 (27%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 L V+ + +S + S I TT +G I++ D +K++ K Sbjct: 24 LKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGK 74 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E D Sbjct: 75 QNLSEMVVEKVLNDKYKVTDEEVT---------------KQLKELKDKMGDNFNTYMESN 119 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + V L++ Sbjct: 120 GVKNEDQLKEKLKLTFAFEKAIKATVTEKDIKDHYKPKLQVSHILVK------------- 166 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G+ + +F++ K Sbjct: 167 ---DEKTAKEIKEKLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 223 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + DK++L K + + +I+ + + + L Sbjct: 224 EVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRDLLK 283 Query: 311 NAIIH 315 NA I Sbjct: 284 NADIK 288 >gi|94263261|ref|ZP_01287077.1| PpiC-type peptidyl-prolyl cis-trans isomerase [delta proteobacterium MLMS-1] gi|93456344|gb|EAT06468.1| PpiC-type peptidyl-prolyl cis-trans isomerase [delta proteobacterium MLMS-1] Length = 630 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 20/248 (8%), Positives = 63/248 (25%), Gaps = 7/248 (2%) Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 + + L + + L+ + + +D + V +++ A A Sbjct: 145 VKEFEQGIRTDLLRRKIIDHLVGFAQVSDDEVRQRFHYDHDQVRLAYLRLAAADFKPAST 204 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 S+ + +N ++ E EI A + + Sbjct: 205 PSAEELEAFFQENSQDYLSPPMVRLDYLLFTPEREPEAIAEEEIVAYYEANREEFSLPEQ 264 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL---EKFASKIHDVSIGKAQY 236 R I + R + R + ++ + G + Sbjct: 265 RRARHILIRSADNDSPELRASRKEQLRAVLERARAGHDFAELVALYSEDARA-AGGDLGF 323 Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNT 293 ++ + ++ T+ G + + + + ++ ++ + Sbjct: 324 FQRDEMVEPIEEAAFALEPGEISDIVETRFGFHILKLDELQPARQLELAEVRDEIADRLQ 383 Query: 294 PTKIEKHE 301 +I+ Sbjct: 384 DEEIQDES 391 Score = 35.8 bits (80), Expect = 8.5, Method: Composition-based stats. Identities = 27/290 (9%), Positives = 69/290 (23%), Gaps = 16/290 (5%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQEL-IVE 83 + + +N E ++ + +R Q + + ++ L I E Sbjct: 25 FIFWLPQMGGDGGPGTVAVVNEEPLSLREFQRRYNETLSQYRDEFGVIPPDLLEALGIRE 84 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + +Q I++ + + + S + + Sbjct: 85 QVLQQLIQEQLLLQSAKKTGLPATSSEVQR-----EIQSMGEFSDEAGRFDLERYRQTLT 139 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + +F + + V + +R D + Sbjct: 140 AARLSVKEFEQGIRTDLLRRKIIDHLVGFAQVSDDEVRQRFHYDHDQVRLAYLRLAAADF 199 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL-------LESDLHPQFQNLLKKSQNN 256 S + ++ + + + YL E+ + + ++ Sbjct: 200 KP-ASTPSAEELEAFFQENSQDYLSPPMVRLDYLLFTPEREPEAIAEEEIVAYYEANREE 258 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 + P + I D + K L A + AE V Sbjct: 259 FSLPEQRRARHILIRSADNDSPELRASRKEQLRAVLERARAGHDFAELVA 308 >gi|225850929|ref|YP_002731163.1| SurA N- domain family [Persephonella marina EX-H1] gi|225645389|gb|ACO03575.1| SurA N- domain family [Persephonella marina EX-H1] Length = 286 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 100/304 (32%), Gaps = 27/304 (8%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + ++++ +V + + +I +NG+ + +I ++ +K Sbjct: 1 MRVLLSLILLVMMVVSSAISEEKLLDKIVLVVNGKPVLKSEIELAKEWYGVKSDKEAAKK 60 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSFLDKQGIGDNH 133 LI + + Q EK GI V+ ++ AR S +F L+++G+ + Sbjct: 61 -----LIDQIILAQAAEKVGIHATPTEVDNAILRLARMNRLGSVNEFKKRLEERGLVFSL 115 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 FK + + + V + +R + D Sbjct: 116 FKDLIKREIVISKFVHIYLKRNL------------FEGIEEGKAVDLRKIRLIYLDKSKP 163 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 + + + ++++ G + + DL + + Sbjct: 164 GFNEK----YEILKKLVNKEPFDKLAKEYSDDPVTAEKGGLLGEVKKGDLVKTLDKPIWE 219 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + T KGV +I I + + + + + K++K Y+KKL+ NA Sbjct: 220 HKVGDIFEIDTDKGVYFIKI----ESEEKKIVHQEPTGEEVNKKLQKEVELYLKKLKENA 275 Query: 313 IIHY 316 ++ Y Sbjct: 276 VVEY 279 >gi|42780354|ref|NP_977601.1| peptidylprolyl isomerase [Bacillus cereus ATCC 10987] gi|42736273|gb|AAS40209.1| protein export protein prsA [Bacillus cereus ATCC 10987] Length = 285 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 28/285 (9%), Positives = 70/285 (24%), Gaps = 41/285 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT D K++ K Sbjct: 4 KHIFIITALLSILMLSACGQKNDSDTVATATDSTITKSDFEKQLK--------DRYGKDM 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + S D + + + Sbjct: 56 LYEMMAQDVITKKYKVSDDDVDKELQKAKNQYGDQFKNVLKNNGLKDEADF--------- 106 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 107 --KNQIKFKLAMNEAIKKSITEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ ++ ++ + + G Y + P+F+ K Sbjct: 145 SDENEAKEIKKKLDAGASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLKV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 +NP + G I + DK+ L +K + +I Sbjct: 205 GQISNPVASPNGYHIIKLTDKKALKPYDEVKDSIRKNLEEERISD 249 >gi|332532266|ref|ZP_08408147.1| peptidyl-prolyl cis-trans isomerase PpiD [Pseudoalteromonas haloplanktis ANT/505] gi|332038364|gb|EGI74809.1| peptidyl-prolyl cis-trans isomerase PpiD [Pseudoalteromonas haloplanktis ANT/505] Length = 633 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 43/398 (10%), Positives = 110/398 (27%), Gaps = 96/398 (24%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + + V++ F + I SY +NG I+ D ++ Sbjct: 1 MLEKIREGSQGPVAKIILGAVILSFALAGIGSYLGQTTEQP-VAEVNGIKISQTDFNRAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + ++ + V L+ + L+ Q G+ +V Sbjct: 60 QNERSRLEQQFGEYFTQIAADPNYMAQIRQGVVDRLVQQELQSQLAADLGLRVSDESVRK 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 ++ + + + + + + F++YL VV Sbjct: 120 TILELPYFQIGEKFNNDRYLQVIRQMNFQPDAFREYLRKDMTRSQVVSAVAGTDFALESE 179 Query: 149 --------------------KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF--- 185 K + E+ + + LI Sbjct: 180 LKSAIALQQQTRSIDYVVVNKEALAANVEVSDQEVSDYYDLNASQFLSPELISVSYIELK 239 Query: 186 --------SIPDNKLQNQGFVQKRIKDAEE-----SRLRLPKDCNKLEKFASKIHDV--- 229 D+ + + + E+ + +D + ++ A+ +H Sbjct: 240 AADINVESVTDDDVKAYYEQNKAQYVEPEKRRVSHILIDNSEDDDAAKEKANALHAQLEQ 299 Query: 230 -------------------SIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVE 268 G +++ + P F++ +++ + ++ ++ G Sbjct: 300 GADFAELAQSSSDDIVSGEMGGDLEWIERDVMDPAFEDAAFALENKGDISDVVTSEFGYH 359 Query: 269 YIAICDKRD--LGGEIALKAYLSAQNTP-TKIEKHEAE 303 I + D + + +KA L A+ KI+ + Sbjct: 360 IIKLTDIQPQQVKAYDDVKADLRAELEQAEKIDAFYEK 397 >gi|326792525|ref|YP_004310346.1| copper amine oxidase-like domain-containing protein [Clostridium lentocellum DSM 5427] gi|326543289|gb|ADZ85148.1| copper amine oxidase-like domain-containing protein [Clostridium lentocellum DSM 5427] Length = 444 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 31/308 (10%), Positives = 67/308 (21%), Gaps = 31/308 (10%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDI----SKRIALLKLQKIN----------GELEKIAV 77 + + + IT +I + +L+ Q + + Sbjct: 139 AITPGITGHAVVAKVGDLTITAKEILTQLDYEMMMLQYQYQYDDSFFETEEAKQYMEQRK 198 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK--QGIGDNHFK 135 EL+ +K + G T E + F Sbjct: 199 GELVDYIIKNKVALIKGRELKLEPTVTEVNNEFNKTKEDYETAAEFEKALVNSGLTTEGY 258 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + S+ V + EI A + + + Sbjct: 259 KTQIKDSLTISNVAKYISKNIPVTDAEIKAYYESNSGNYTMPPGAEMAHILVATEEEAKA 318 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD---LHPQFQNLLKK 252 + + +K+ + + G+ Y+ Sbjct: 319 IKAE---------YDKGTSFAELAKKYGTDGTKDTGGELGYIAYDSSYYDQDFLDGAKTL 369 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGE---IALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + +NP TQ G I + + + +K L K + + + Sbjct: 370 EEGQVSNPVKTQFGWHLIKVLNVHKEAYKVLLEEIKEDLKNIIISEKATEFIYSQLDEWG 429 Query: 310 SNAIIHYY 317 I Y Sbjct: 430 KEMTIEKY 437 >gi|326803153|ref|YP_004320971.1| putative peptidylprolyl isomerase PrsA3 [Aerococcus urinae ACS-120-V-Col10a] gi|326651580|gb|AEA01763.1| putative peptidylprolyl isomerase PrsA3 [Aerococcus urinae ACS-120-V-Col10a] Length = 340 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 87/311 (27%), Gaps = 34/311 (10%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70 F K T V + ++ + T + IT G ++ ++ + Sbjct: 2 KFKKKFTLGLVSSLCAFT--LAACQSQSNDSAVATGDDIKITQGQLNDQMKKVAG----- 54 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 +++LI+ + KQE+ K + G + + + Sbjct: 55 ---DQTLRQLILSEISKQEVGKDRYKEIEQETDQQIAATKAQVGDNDKFQNVLKSSGVPS 111 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + +K+ L ++ + +K + + L+ + Sbjct: 112 EEAYKESLIQYTLTQEALKKNIPVSDEELKKAYEDYEPAA-------------------E 152 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL 249 + KD + + ++ + G + + + +F++ Sbjct: 153 ISHILVEDENEAKDIIKQLDQGGDFSALAKEHSKDPGSKEKGGSLGQVEKGQMVKEFEDA 212 Query: 250 LKK-SQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA--EYV 305 K ++ T P +Q G I + K K L+ Q K++ + Sbjct: 213 AFKLNEGEYTKEPVKSQYGYHIIKLDKKGQKSSFEDEKDNLTEQVKNKKMQDPSTLLQVT 272 Query: 306 KKLRSNAIIHY 316 L I Sbjct: 273 SDLLKKYNIDI 283 >gi|260591263|ref|ZP_05856721.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella veroralis F0319] gi|260537128|gb|EEX19745.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella veroralis F0319] Length = 478 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 26/256 (10%), Positives = 70/256 (27%), Gaps = 14/256 (5%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEK 92 + + + + E I ++ + + + G+ E + +++ V+ L + Sbjct: 47 ANNVVDEVIWVVGDEPILKSEVEIMKLQGEAEGMKWDGDPECVLPEQIAVQKLFLHQAAL 106 Query: 93 SGITFDSNTVNYFFVQHARNTG--LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 + + + Q + Q +Q L +V+ Sbjct: 107 DSVEVTESEIAQGVDQQINYWISLPQIGSKEKLEEFQHKSIAQLRQDLHDDYKNRQLVQK 166 Query: 151 ---DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + E+ +K+ ++ + + V + + Sbjct: 167 MQAKLVGDVKVSPAEVREYFRKLPVDSIPMIPTTVEVEILTQTPKVEPEEVNRIKNQLRD 226 Query: 208 SRLRLPKDCNKLEKFASKIHD-----VSIGKAQYLLESDLHPQFQNLLKKSQN--NTTNP 260 R+ K A + G+ Y+ L P F + + + Sbjct: 227 YTDRVTKGETSFATLARLYSEDPGSSRQGGELGYMGRGMLDPAFAAVAFNLTDPKKVSKI 286 Query: 261 YVTQKGVEYIAICDKR 276 ++ G I + D+R Sbjct: 287 VESEFGYHIIQLIDRR 302 >gi|228921530|ref|ZP_04084852.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838149|gb|EEM83468.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 293 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 86/305 (28%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 L V+ + +S + S I TT +G I++ D +K++ K Sbjct: 14 LKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGK 64 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E D Sbjct: 65 QNLSEMVVEKVLNDKYKVTDEEVT---------------KQLKELKDKMGDNFNTYMESN 109 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + V L++ Sbjct: 110 GVKNEDQLKEKLKLTFAFEKAIKATVTEKDIKDHYKPKLQVSHILVK------------- 156 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G+ + +F++ K Sbjct: 157 ---DEKTAKEIKEKLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 213 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + DK++L K + + +I+ + + ++L Sbjct: 214 EVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRELLK 273 Query: 311 NAIIH 315 NA I Sbjct: 274 NADIK 278 >gi|116747610|ref|YP_844297.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophobacter fumaroxidans MPOB] gi|116696674|gb|ABK15862.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophobacter fumaroxidans MPOB] Length = 632 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 18/256 (7%), Positives = 61/256 (23%), Gaps = 5/256 (1%) Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + L ++++V + ++ F + + E Sbjct: 150 KDIAESIAYERLLNFIKRQVVVTDEEVTADYRTNYGQVQIAYALFDPKSFEDKVTVDEQG 209 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + +M + + ++ Sbjct: 210 AQEYFQNHRERYMEPEKRRFSLVLYKPEAYMDQAGVTGDDMRRYYDDHISEYRHEQQVRA 269 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAE-ESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLL 238 R +LF + ++ + + + + + K++ + G Sbjct: 270 RQILFRLKEDAAEEEIAKARSEAEKVLAEARKGKDFAELARKYSQDTATAKNGGDLGAFT 329 Query: 239 ESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPT 295 + F + + ++ T G I + + ++ + Sbjct: 330 RGQMLEPFSDAAFAMKKGEISDLVETPDGFHIIKVEEIIPEKTTSFEEARSGIEQAVKRQ 389 Query: 296 KIEKHEAEYVKKLRSN 311 K + E +KL Sbjct: 390 KAREAAYEKARKLLDQ 405 Score = 44.3 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 31/324 (9%), Positives = 84/324 (25%), Gaps = 30/324 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + ++ + +L+ V + S I+ E I++ D Sbjct: 1 MLNLFREHSKSWM--IKALLILVAIVFVWWGGATYQSKSDTAVVQIDDEFISERDYYNVY 58 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + + L+ + LI L + + G++ + V + Sbjct: 59 EKMVTRYRTQLGKAWSEKLVEEMNLKGQVLDMLINRYLVSKAARELGLSASTEEVRRRIL 118 Query: 108 QHARNTGLSAEDFSSFLD--KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 ++ D ++ +Q + +SI + + N + + E+ A Sbjct: 119 EYPVFLNDGRFDQLTYERVLRQERLTPEGFEKDIAESIAYERLLNFIKRQVVVTDEEVTA 178 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ--KRIKDAEESRLRLPKDCNKLEKFA 223 + + Y + + QG + + ++ + + A Sbjct: 179 DYRTNYGQVQIAYALFDPKSFEDKVTVDEQGAQEYFQNHRERYMEPEKRRFSLVLYKPEA 238 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 G D ++++ + + + Sbjct: 239 YMDQAGVTGDDMRRYYDDHISEYRHEQQVRARQI-----------LFRLKEDAAEEEIAK 287 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKK 307 ++ + K AE +K Sbjct: 288 ARSEAEKVLAEARKGKDFAELARK 311 Score = 37.0 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 24/253 (9%), Positives = 70/253 (27%), Gaps = 10/253 (3%) Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 E Q + + ++ EK+ D + A + ++ + Sbjct: 376 EEARSGIEQAVKRQKAREAAYEKARKLLDQVYAKKDLAKSAEEQNMPVTGGDMWIAETDP 435 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 I ++ + DF + + + A ++ V + Sbjct: 436 LPGFQTPLADISRKLFELPEKDFSDIFDTPQGYLIAQVTGIQPPQVPSFDKVKQRVEKDC 495 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLE--KFASKIHDVSIG-----KAQYLLESDL 242 + + Q++ + ++ + K A + D + L + Sbjct: 496 RAERARVLAQQKAAELLDAARKANSLETAASGLKLAVRKSDWFSRHAPDKDLRLLRGGAV 555 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKHE 301 F+ + +++ + +R G ++A + + T K Sbjct: 556 DQVFRLEENQPFPDSS--LEFGNRFLVCQLLGRRLPEGELEKVRADIVKRLTQQKQSMMW 613 Query: 302 AEYVKKLRSNAII 314 ++++ R + I Sbjct: 614 TAWLQEQRGKSKI 626 >gi|229128201|ref|ZP_04257182.1| Foldase protein prsA 1 [Bacillus cereus BDRD-Cer4] gi|228655060|gb|EEL10917.1| Foldase protein prsA 1 [Bacillus cereus BDRD-Cer4] Length = 303 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 85/305 (27%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 L V+ + +S + S I TT +G I++ D +K++ K Sbjct: 24 LKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGK 74 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E D Sbjct: 75 QNLSEMVVEKVLHDKYKVTDEEVT---------------KQLEELKDKMGDNFNTYMESN 119 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + V L++ Sbjct: 120 GVKNEDQLKEKLKLTFAFEKAIKATVTEKDIKDHYKPKLQVSHILVK------------- 166 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G+ + +F++ K Sbjct: 167 ---DEKTAKEIKEKLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 223 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + DK++L K + + +I+ + + + L Sbjct: 224 EVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRDLLK 283 Query: 311 NAIIH 315 NA I Sbjct: 284 NADIK 288 >gi|229046560|ref|ZP_04192211.1| Foldase protein prsA 1 [Bacillus cereus AH676] gi|228724735|gb|EEL76041.1| Foldase protein prsA 1 [Bacillus cereus AH676] Length = 303 Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 86/305 (28%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 L V+ + +S + S I TT +G I++ D +K++ K Sbjct: 24 LKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGK 74 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E D Sbjct: 75 QNLSEMVVEKVLHDKYKVTDEEVT---------------KQLKELKDKMGDNFNTYMESN 119 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + V L++ Sbjct: 120 GVKNEDQLKEKLKLTFAFEKAIKATVTEKDIKDHYKPKLQVSHILVK------------- 166 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G+ + +F++ K Sbjct: 167 ---DEKTAKEIKEKLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 223 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + DK++L K + + +I+ + + ++L Sbjct: 224 EVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRELLK 283 Query: 311 NAIIH 315 NA I Sbjct: 284 NADIK 288 >gi|94310820|ref|YP_584030.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cupriavidus metallidurans CH34] gi|93354672|gb|ABF08761.1| Peptidyl-prolyl cis-trans isomerase [Cupriavidus metallidurans CH34] Length = 647 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 28/267 (10%), Positives = 63/267 (23%), Gaps = 27/267 (10%) Query: 52 TDGDISKRIALLKLQKI-------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 T + R+ + + K + LI ++++++ I Sbjct: 149 TPEQLDARMRFELSTQQLGGAIGTTAFVPKSLLDRLIAIRDQQRDVQ--AIVIKPADFTA 206 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 A E + + + ++ Sbjct: 207 KVTPDAAALKAYYESHLAAYTMPEQAKVEYLVLSGDALAASQTI----------TPDQLK 256 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + + R I K + + + AE+ L K + A Sbjct: 257 SYYDSNIQRFHTDEQRRASHILIAAPKDGKEADRKAAKEKAEKLLEDLRKHPDTFADVAK 316 Query: 225 KIH-----DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 K G ++ L F++ + ++ T G I + + Sbjct: 317 KNSQDPGSAEKGGDLGFMGRGALVKPFEDAMFALKDGQISDVVETDYGYHIIKLTGIKPA 376 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAE 303 E A++ L + K E Sbjct: 377 ATEPLEAVRPELEIELKKQLAAKAYTE 403 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 15/144 (10%), Positives = 39/144 (27%), Gaps = 20/144 (13%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------G 70 F + SY + SS ++G IT ++ + + Sbjct: 23 SFVFFGVESYSRFMDSSHDAAKVDGRAITVQEVDNVVRDQSERMRQMLGNNYDPRMFEGP 82 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA-------RNTGLSAEDFSSF 123 + + +LI + + + +K +T + + + + Sbjct: 83 AARQAVLDQLIQQRVISEATQKKHLTVSDAQIAAAIQSIPAIAQLRTADGKFDEKAYVQL 142 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDV 147 L QG+ + + + Sbjct: 143 LAAQGMTPEQLDARMRFELSTQQL 166 >gi|228959094|ref|ZP_04120794.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229145438|ref|ZP_04273824.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST24] gi|228638014|gb|EEK94458.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST24] gi|228800603|gb|EEM47520.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 303 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 85/305 (27%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 L V+ + +S + S I TT +G I++ D +K++ K Sbjct: 24 LKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGK 74 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E D Sbjct: 75 QNLSEMVVEKVLHDKYKVTDEEVT---------------KQLKELKDKMGDNFNTYMESN 119 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + V L++ Sbjct: 120 GVKNEDQLKEKLKLTFAFEKAIKATVTEKDIKDHYKPKLQVSHILVK------------- 166 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G+ + +F++ K Sbjct: 167 ---DEKTAKEIKEKLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 223 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + DK++L K + + +I+ + + + L Sbjct: 224 EVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRDLLK 283 Query: 311 NAIIH 315 NA I Sbjct: 284 NADIK 288 >gi|212550918|ref|YP_002309235.1| peptidyl-prolyl cis-trans isomerase SurA [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549156|dbj|BAG83824.1| peptidyl-prolyl cis-trans isomerase SurA [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 480 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 35/323 (10%), Positives = 102/323 (31%), Gaps = 18/323 (5%) Query: 2 TSKVFTSLSDFIKLLTTYF--VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR 59 + L ++ L + ++++ + + + + TI EVI D+ Sbjct: 10 LQNISKWLIYYVIHLNKFIHSIIVLTLVSSGLINAQSNVIDEVVWTIGNEVILRSDVENV 69 Query: 60 IALLKLQKI--NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 +++ G+ + ++L ++ L ++ + I + V+ + Sbjct: 70 RLQMQINNQYIEGDPYCVIPEQLAIQKLYLRQAKLDSINIPESQVSQMTESWINHLIDQI 129 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWP---DVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 + G + ++ ++N + +I ++ + Sbjct: 130 GSKEKVEEYCGKPISVLREEKKQAIREQGMIQAMQNKLVSGVKVTPSDIRNFYNQIPQDS 189 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-----HDV 229 + + I L + + +E + + A + Sbjct: 190 LPFIPTTVEVEIITLKPLVTLEEINNIKQKLKEYIELVTSGQKEFSTLARLYSEDINSAM 249 Query: 230 SIGKAQYLLESDLHPQFQNLLKK--SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 G+ ++ +S L P+F + + + + T+ G I + +K+ G+ + Sbjct: 250 KGGELNFVCKSSLSPEFAAVAFELSNPKKVSRIVETEYGYHIIQLIEKK---GDRINVRH 306 Query: 288 LSAQNTPTKIEKHEAEY-VKKLR 309 + + TK E + Y + +R Sbjct: 307 ILLKPHATKEELAKVSYRLDSIR 329 >gi|294508706|ref|YP_003572765.1| Foldase protein prsA [Precursor] [Salinibacter ruber M8] gi|294345035|emb|CBH25813.1| Foldase protein prsA [Precursor] [Salinibacter ruber M8] Length = 342 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 15/265 (5%), Positives = 61/265 (23%), Gaps = 7/265 (2%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + + + + + ++LI ++ + + + Sbjct: 69 QQQVRMSMKRQAPSQQSEDQMQETHRQLIRGFARQHALRGEAKAQNLDVDPTQVNARLEK 128 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 E F + + ++ + + + E + Sbjct: 129 LKQRYESEEQFQKQLARNNMTVDSVRSLLADQFRQQQLQRQMAENYEEPSSDDVTAYSEK 188 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + + + + + +++ + + G Sbjct: 189 NRRIRAQHILIKAGENAPESEVDSARKAAAALVDSAKMEDVDFAELARRHSQGPSAQKGG 248 Query: 233 KAQYLLESDLHPQFQNLLK--KSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 + + +F + P T+ G I + + + Sbjct: 249 DLGFFTRDRMVDKFAEAAYALSDSGDVAPEPVHTRFGFHVIRLTNAGEPMDTTKA----R 304 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAII 314 Q T + ++ + + L +A + Sbjct: 305 KQMTKERRQQAVEDQINALLEDATV 329 >gi|312621942|ref|YP_004023555.1| ppic-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor kronotskyensis 2002] gi|312202409|gb|ADQ45736.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor kronotskyensis 2002] Length = 340 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 28/299 (9%), Positives = 88/299 (29%), Gaps = 23/299 (7%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL----------------IVET 84 R+ +NGE +T + R LK I + ++ I+ Sbjct: 36 RVVLEVNGEQVTKREYKIRFNALKENAIQFSSRTDILDQVFNGKTYRELLKDELFTILTE 95 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 E + ++ + E+ + ++ N + + Sbjct: 96 ELLCLQEARKRNINLTKQEEEEIKKYIQELKTNEEMRGYFNQYLRKINSDENHFYRDLYK 155 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 ++ + + + + + + + ++ Sbjct: 156 TRLINKLYSSITSKTTVSDSEIINYYNTNKNQFKKRKIIDIFLKVENEEEDARKREIANK 215 Query: 205 AEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQF-----QNLLKKSQNNTT 258 + ++K++ + G Y + + ++ + + K + + Sbjct: 216 IVSELKKGESFEKLVKKYSEDDGASTTKGIIDYFRKGEKEAEYGSVFEEEVFKLAVGQIS 275 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 N T KG + + D++ + + +K + ++ K ++ Y++ L+ + I+ Y Sbjct: 276 NVIKTVKGYHIVKVLDEKYMPLDE-VKEEIQSKLMKQKKDEAFRLYIENLKKLSKINVY 333 >gi|282878158|ref|ZP_06286955.1| PPIC-type PPIASE domain protein [Prevotella buccalis ATCC 35310] gi|281299736|gb|EFA92108.1| PPIC-type PPIASE domain protein [Prevotella buccalis ATCC 35310] Length = 476 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 86/304 (28%), Gaps = 40/304 (13%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + +++ C S + + TING+ IT + G + Sbjct: 1 MKKMKKLLTIMLCC----SSMALAQQTDPVVMTINGQPITRSEFEYSYN---KNNAEGVI 53 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 +K V E + + + + +T Sbjct: 54 DKKTVDEYVDLFINYKLKVMAAQAAKMDTARS--------------------------FK 87 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF-SIPDNK 191 Q I P ++ EI Q+ + +LF + Sbjct: 88 TEFATYRDQQIRPAMIT---DADVEQRAREIYRESQQRVDGVGGLVKPAHILFGIRQTDG 144 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLL 250 + ++R + L+ + + G+ ++ + +F+++ Sbjct: 145 EDKKNQAKQRADSVYNALLKGADFAALARQLSDDRGSAEQGGELPWIEKGQTLKEFEDMA 204 Query: 251 KK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKL 308 + + P+++ G + + DK +L+ + E+ ++ ++ L Sbjct: 205 FSLRKGELSKPFLSPAGYHIVLLKDKGKFFPYDSLRTSILRFIEQRGIREQIISQKIETL 264 Query: 309 RSNA 312 A Sbjct: 265 AKAA 268 >gi|226327126|ref|ZP_03802644.1| hypothetical protein PROPEN_00991 [Proteus penneri ATCC 35198] gi|225204344|gb|EEG86698.1| hypothetical protein PROPEN_00991 [Proteus penneri ATCC 35198] Length = 135 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 47/127 (37%), Gaps = 3/127 (2%) Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-L 250 ++ K + + + R + +++ + G+ + + P F++ + Sbjct: 2 SDEQAYAKLQQISADIRSGKITFADAAREYSEDPGSALRGGELGWSMPDVYDPAFRDALM 61 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + ++N + P + G I + D R + + A K K + ++++LR Sbjct: 62 RLNKNELSQPVRSNFGWHLIELEDTRSVDKTDAANKEQAYRLLFNRKFNEEVQNWMQELR 121 Query: 310 SNAIIHY 316 A + Sbjct: 122 VGAYVKI 128 >gi|77459915|ref|YP_349422.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens Pf0-1] gi|77383918|gb|ABA75431.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens Pf0-1] Length = 623 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 30/268 (11%), Positives = 87/268 (32%), Gaps = 10/268 (3%) Query: 54 GDISKRIALLKLQKINGELEKIAVQELIV----ETLKKQEIEKSGITFDSNTVNYFFVQH 109 + +++ ++Q +++ + +L + + T ++ + Sbjct: 137 DQVIRQLGYSRMQFRQMLAQEMLIGQLRAGVAGSGFVTDAQVLAFARLEKQTRDFATLNI 196 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + F + + ++ K+ F + + ++ A QK Sbjct: 197 KADPSAVKLTDDEVKAYYDEHAKEFMTPDQVVIDYLELKKSSFFDQVAVKDEDLQAAYQK 256 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HD 228 + +L + D + + +I++ + + K ++F+ Sbjct: 257 EIANLSEQRRAAHILIEVNDKTTE--AQAKAKIEEVQARLAKGEKFEALAKEFSQDPGSA 314 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALK 285 + G Y P F+ L +++ + P T G I + ++ +LK Sbjct: 315 NNGGDLGYAGPGVYDPAFEKALYSLNKDQVSEPVRTDFGFHLIKLLGVEAPEVPTLASLK 374 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 L+ + ++E+ E K+L ++ Sbjct: 375 DKLTRELKTQQVEQRFVEATKQLEDSSF 402 Score = 68.9 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 33/322 (10%), Positives = 83/322 (25%), Gaps = 27/322 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + + + +NGE I+ ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIVALMALTGFDAIFQATTHKNEAAKVNGEEISQNELSQAV 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + + Q + L + A++ LI L Q E+S F ++ + Sbjct: 61 DMQRRQLMQQLGKDFDASLLDEKMLRESALKGLIDRKLLLQGAEQSKFAFSEAALDQVIL 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 Q F + + ++ G+ + Sbjct: 121 QTPEFQVDGKFSSDRFDQV-IRQLGYSRMQFRQMLAQEMLIGQLRAGVAGSGFVTDAQVL 179 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + + + P V+ + + + + + Sbjct: 180 AFARLEKQTRDFATLNIKADPSAVKLTDDEVKAYYDEHAKEFMTPDQVVIDYLELKKSSF 239 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGEIALKA 286 + + ++L Q N ++ I + DK A Sbjct: 240 F-----------DQVAVKDEDLQAAYQKEIANLSEQRRAAHILIEVNDKTTEAQAKAKIE 288 Query: 287 YLSAQNTP-TKIEKHEAEYVKK 307 + A+ K E E+ + Sbjct: 289 EVQARLAKGEKFEALAKEFSQD 310 >gi|196043445|ref|ZP_03110683.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus 03BB108] gi|225864299|ref|YP_002749677.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus 03BB102] gi|196025754|gb|EDX64423.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus 03BB108] gi|225788486|gb|ACO28703.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus 03BB102] Length = 283 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 30/308 (9%), Positives = 84/308 (27%), Gaps = 48/308 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 + L +++ + S + T + IT+ ++SK + + Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--ITEKELSKELK--------QKYG 50 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + + ++++ + + S + S+ ++ Sbjct: 51 ESTLYQMVLSKALLDKYKVSDEEAKKQVEE-------AKDKMGDNFKSTLEQVGLKNEDE 103 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 K+ + + + +K K + + Sbjct: 104 LKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD------------------- 144 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 +K K+ +E ++++ G+ +F+ K Sbjct: 145 -----EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEEAAYK 199 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKK 307 + P T G I + DK++L +K + +++ ++ V + Sbjct: 200 LDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQVVNE 259 Query: 308 LRSNAIIH 315 L +A I Sbjct: 260 LLKDADIK 267 >gi|257065468|ref|YP_003145140.1| parvulin-like peptidyl-prolyl isomerase [Slackia heliotrinireducens DSM 20476] gi|256793121|gb|ACV23791.1| parvulin-like peptidyl-prolyl isomerase [Slackia heliotrinireducens DSM 20476] Length = 438 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 33/300 (11%), Positives = 77/300 (25%), Gaps = 36/300 (12%) Query: 42 IRTTINGEVITDGDISKRIALLKLQK-----------------INGELEKIAVQELIVET 84 + T+NG I + I+ I + +L + + +T Sbjct: 47 VAATVNGVEIGENSITGYIEDFRSLNGLTEDAAWAEWMVNAGYTAEDLRSEVINYYVNQT 106 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 L +Q E++G+T DS ++ + L GI + Sbjct: 107 LVRQAAEENGVTVDSAEIDSQVETMKS-NYEDEAAWDEALQSVGIQSEEVYRSELELYAM 165 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 + E ++ Q +LF+ D Q Q + Sbjct: 166 EQALVPIVAGDAEPSEEDLLMYAQMYGPAYDGAKKSSHILFAADDEATAQQVLDQINNGE 225 Query: 205 AEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYV 262 + +++ G + + ++ + + + Sbjct: 226 I--------DFADAAAQYSIDTASAADGGNVGWDALNSFVTEYTDALSNLEEGQVSGLVT 277 Query: 263 TQKGVEYIAICDKRDLGGE--------IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + G+ I + E L+ + + + + E+ + A I Sbjct: 278 SDYGIHIIKCTEVFTCPEEVTSIEELPQELQDLIMDYVSSSAQDMAYQEWFSSYQEGADI 337 >gi|120436843|ref|YP_862529.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gramella forsetii KT0803] gi|117578993|emb|CAL67462.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gramella forsetii KT0803] Length = 482 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 31/297 (10%), Positives = 79/297 (26%), Gaps = 15/297 (5%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQEI 90 I I +I D D+ ++ Q + L+ L Sbjct: 55 GSQRMKVDGIAAVIGEYIILDSDVDLMYKDMQSQGMSTADVTDCNLAGSLMENKLYAHHA 114 Query: 91 EKSGITFDSNTV----NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 + I + + + A+ G + + + L Q Sbjct: 115 IQDSIIIPDSQISATVDQQIQGLAQQAGSMEKVLEFYKKESEAELRDEIFQLTKQRQLAQ 174 Query: 147 VVKNDFMLKYGNLEMEIPANK--QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 ++ + + E+ K + E + ++ + + Q + + Sbjct: 175 RMQQKIIEEIEVTPEEVRQYYVGMDEKPMFGTEVELSQIVIEPEIPESEKQKVIDRLNGF 234 Query: 205 AEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYV 262 + K ++ + G+ + +F+++ + + P+ Sbjct: 235 KADIEENGASFSTKAVLYSQDPGNASDGGRITLTRKDAFVKEFKDVAFSLQEGEISEPFE 294 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA---IIHY 316 T+ G I + R E L+ + + + + LRS I + Sbjct: 295 TEFGYHIIQVDKIRGQTVE--LRHIILIPDVTNASVEAARTEIDTLRSKITAGDIEF 349 >gi|313676103|ref|YP_004054099.1| ppic-type peptidyl-prolyl cis-trans isomerase [Marivirga tractuosa DSM 4126] gi|312942801|gb|ADR21991.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marivirga tractuosa DSM 4126] Length = 703 Score = 79.3 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 25/254 (9%), Positives = 65/254 (25%), Gaps = 7/254 (2%) Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 TD ++ K Q I+ + + + + T + Sbjct: 227 TDSELKSYYNEHKDQYKTDASRTISYISIELLPSGEDSTMMREEIEELKTEFQKVDDDSA 286 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 L+++ +S+ + D + + + + K+ Sbjct: 287 FARLNSDRSNSYRTYPIAQLPKILASNTNIIK-----EGDVLGPFIDEGAYVLYKASKIF 341 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 TV +L D+ + +K ++ + + F+ Sbjct: 342 EDTVSSVKASHILIEAEDDSDEADAQARKEAREVLQKAQSGQDFAELAKDFSDGPSATRG 401 Query: 232 GKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 G + E + +F + TQ G I + +++ + Sbjct: 402 GDLGWFREGQMVDEFNEAVFAKSGTGVINEVIKTQYGYHIIKVTEEKTAKTYEIATIHRD 461 Query: 290 AQNTPTKIEKHEAE 303 T T ++ + Sbjct: 462 IIPTETTRDRLYRK 475 >gi|308066877|ref|YP_003868482.1| Parvulin-like peptidyl-prolyl isomerase [Paenibacillus polymyxa E681] gi|305856156|gb|ADM67944.1| Parvulin-like peptidyl-prolyl isomerase [Paenibacillus polymyxa E681] Length = 372 Score = 79.3 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 87/312 (27%), Gaps = 20/312 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRI----------RTTINGEVITDGDISKRIALLK 64 + + + + I + + A +++ T G IT+ + ++ I+++K Sbjct: 11 RMLSLGMAALLAISVLAACTKQADENKVKDEPKDNSKVVVTYKGGTITENEFNQEISMMK 70 Query: 65 LQKINGELE---KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 E ++++ + + + + + S D Sbjct: 71 FLYPEYEAALASDQVREQIVKQEVVYKLLAAKADDKAKEQGAKQGNEQLEQYKKSVGDDK 130 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 +Q + V N K + +++ K K + T + Sbjct: 131 F--KTFLSDKKLTEQGVKDYFTRVMTVINSETNKVTDDQLKQEFEKNKDQFTTATVRHVL 188 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 K + + K K+ + +K++ + G + + Sbjct: 189 INFQDPKTKKQRKKEDALKLAKEVKAKLDGGADFATIAKKYSEDPGSASNGGLYENASVA 248 Query: 241 DLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY---LSAQNTPTK 296 P F+ + N P T+ G I + + + + L + Sbjct: 249 QWVPAFKEAAETQPINKIGEPVETEYGYHVIKVESRNEPTFDKLKDNEKSALKNKLAGES 308 Query: 297 IEKHEAEYVKKL 308 I+ + KL Sbjct: 309 IQNFTENDLAKL 320 >gi|323529999|ref|YP_004232151.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1001] gi|323387001|gb|ADX59091.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1001] Length = 308 Score = 79.3 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 34/286 (11%), Positives = 68/286 (23%), Gaps = 55/286 (19%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +NG VIT + + + L +LI L +Q EK Sbjct: 63 VARVNGVVITQAQLDDAVRASNVPDTPA-LRASIKNQLIARELFRQAAEKQ--------- 112 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 Q + + L + Sbjct: 113 --------------------------------HYESRPQVVAAVEQARTVAMTAAYLRDQ 140 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + ++ + I L + + +++ Sbjct: 141 VKPAPVTDADVKAKYDAIVATLGEFEYKPSAIAVKDADTAQTVLTQLKKGTDFAQLAKQY 200 Query: 223 ASKIHDVSIGKAQYL----------LESDLHPQFQNLLKKSQNNT-TNPYVTQKGVEYIA 271 + G ++ ++ P + L+K Q + P + Sbjct: 201 SQGPGAAQGGALNWISFRTPIQPGNTQNWPQPLAEALVKLPQGGVSSAPVQVGDAFWILR 260 Query: 272 ICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +KR + +K L Q ++K A+ V L NA I Sbjct: 261 VDEKRATQIPQYDQIKDTLRKQLEQVALQKATAQVVVDLMKNAKIQ 306 >gi|237653309|ref|YP_002889623.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thauera sp. MZ1T] gi|237624556|gb|ACR01246.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thauera sp. MZ1T] Length = 631 Score = 79.3 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 19/206 (9%), Positives = 60/206 (29%), Gaps = 11/206 (5%) Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 A + + S++ + + A ++ + + A Sbjct: 200 AADVKVDDAQVSAYYEANPTRFERPARLQAEYLVFDR---AAVERGVEVADDAVRAFYDG 256 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK----DCNKLEKFASK 225 + + ++ Q V + + +A +L ++ + Sbjct: 257 NPQRFGVPEERQARHILLALDQGAEQAEVDRVMAEARALVEQLRADPARFAALAKEKSQD 316 Query: 226 I-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD--LGGE 281 + G + + F++ + + P + GV + + D + + Sbjct: 317 PGSAGNGGDLGFFARGVMVGAFEDAVFSLQKGVIGEPVRSDFGVHIVEVTDIKPSSVKPF 376 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKK 307 A++A + A+ + + AE ++ Sbjct: 377 EAVRAEILAELRAQEAGRRFAELAEQ 402 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 53/164 (32%), Gaps = 18/164 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M V + + + +++ F + +Y S + S+ + G I + + + Sbjct: 1 MFEAVRN--NKRVAQVILALLIVPFAFFGMDAYFSDSGSANEAARVGGTTIGAWEFDQAL 58 Query: 61 ALL-------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + + EL + ++ LI + + ++ + + Sbjct: 59 REQQDRLRQDGGGQVDRALLQSAELRRAVLENLINQRVLALYAAENRLVVTPQQLQETIA 118 Query: 108 QHAR---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 A N S + + + L QG+ F+ LA +V Sbjct: 119 GVASFQENGSFSLQRYETLLRAQGMTPATFEARLAQDVRVQQIV 162 >gi|115375700|ref|ZP_01462954.1| foldase protein PrsA [Stigmatella aurantiaca DW4/3-1] gi|115367263|gb|EAU66244.1| foldase protein PrsA [Stigmatella aurantiaca DW4/3-1] Length = 204 Score = 79.3 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 20/184 (10%), Positives = 51/184 (27%), Gaps = 12/184 (6%) Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + A + I + N + E E+ A + + + Sbjct: 5 ELRAREANRLIIEKLFTNHVYARVAVTEEELRAAYTAHEAEFQEPEQVHAAQLVVKGLDE 64 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLK 251 + Q + K + +++ G + + P F + + Sbjct: 65 ARRVQAQLK---------AGKKFADLARRYSLSADAKVGGDLGFFPRGQMPPVFDEVVFN 115 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 ++ T+ G + + + + ++A + A+ K E+ + K L Sbjct: 116 LRPGQVSDVVSTEYGYHLFRVLEFKPARKRDFVEVRAKVEAREVKRKQEEAHEAFEKALL 175 Query: 310 SNAI 313 A Sbjct: 176 DKAK 179 >gi|57505869|ref|ZP_00371794.1| peptidyl-prolyl cis-trans isomerase, putative [Campylobacter upsaliensis RM3195] gi|57015899|gb|EAL52688.1| peptidyl-prolyl cis-trans isomerase, putative [Campylobacter upsaliensis RM3195] Length = 273 Score = 79.3 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 91/298 (30%), Gaps = 33/298 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 +++ S ++++ T++GE I+D ++++ A + + +L + + LI Sbjct: 4 FSLIAAGLIASISLSLNAATVATVDGEKISDTEVNEFYAPMLRGQDFKKLPEAQQKALIQ 63 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + + I K + + A Sbjct: 64 QYVMQDLILKDAKKQNLEKDPMYIKG---------------------------LERAKDE 96 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + +V +N M ++ +K K V+ ++ + + + + + Sbjct: 97 LLLNVYQNKIMQDIKVDATKVKEAYEKNKEQFVKPARVKAKHILVTNEQEAKNIINELKG 156 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-P 260 +E + + K + G + ES + F + + T P Sbjct: 157 LKDKELEKKFTEIART--KSIDTGSAANGGDLGWFDESTMVKPFTDATFSLKKGEITKTP 214 Query: 261 YVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 T G I D R + K + + + +K ++L NA + Sbjct: 215 VKTNFGYHIILKQDSRAKEQVAFKDAKMGIENRFKFEEFQKRIGLKGQELYKNAKVEI 272 >gi|297622327|ref|YP_003703761.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Truepera radiovictrix DSM 17093] gi|297163507|gb|ADI13218.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Truepera radiovictrix DSM 17093] Length = 641 Score = 79.3 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 30/332 (9%), Positives = 80/332 (24%), Gaps = 33/332 (9%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWA-------MSSRIRTTINGEVITDGDISKRI 60 LS + + + I + ++++ + +NG+ I D+++ Sbjct: 2 RLSKQTNTVILWLIAIALLVSMVIAFTPGTLFGGAQPQQAEAALLVNGQPIRTVDVARFE 61 Query: 61 ALLKLQKIN-----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 A + +LE++ + ELI + L +Q + + V G+ Sbjct: 62 ATPPFNAVQEGPAAEDLEQVLLDELIDQELLRQAASRVN--VSNAEVRARVNAFREEQGV 119 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + + + + + + ++ + Sbjct: 120 AGSANDRAYLDLIGSAGYTDESFRA-LMREQLQRERYLESVAGDLEVTDEEVRAHFEANR 178 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 Y + + D L + +++ G Sbjct: 179 DVYQSEPRIVARQLVVTDEGLA-----NDLYARALAGEDFAALAREHSTE-RAEQGGALG 232 Query: 236 ---------YLLESDLHPQFQNLLKKSQN-NTTNPYVTQKGVEYIAICDKRDLG--GEIA 283 + L + Q T P +++ Sbjct: 233 AAEGESDPRPVTRVALPTAVADAAFALQGTGLTEPIEAAGAFYIVSVEAYEPPQPRPFEE 292 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++ + K + ++ LR A I Sbjct: 293 VQEQVREDALAAKETGAQEAALRTLREEATIE 324 >gi|307826208|ref|ZP_07656418.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacter tundripaludum SV96] gi|307732742|gb|EFO03609.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacter tundripaludum SV96] Length = 343 Score = 79.3 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 37/322 (11%), Positives = 81/322 (25%), Gaps = 64/322 (19%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRI-----------------RTTINGEVITDGDISK 58 + F+ ++ +++ + ++ + +NG+ I + Sbjct: 1 MKKKFIPLLVVGTALIAGCNQEKATNVGSAPAATATPAVDKADAVAVVNGQYIAKSTLET 60 Query: 59 RIALLKLQKINGEL-EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 + + ++ V+ELI L Q+ + + V Sbjct: 61 LEKEIAERSHGQTFPKEKLVEELIQRELLVQDATQKQLDKSPELVAQL------------ 108 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 + + ++N K+ E Sbjct: 109 ------------------EAAKKALLTQADLQNFIKANPVTDAEIKAEYDSKVAAEKGTE 150 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQY 236 Y R +L + + K K + + + G + Sbjct: 151 YKARHILVKTETEAKKLITELDK-----------GADFAKLANKNSLDAKESQNGGDLGW 199 Query: 237 LLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 + + F + + + T P TQ G I D R + + Q TP Sbjct: 200 FSAAQMVAPFSEAVAALEKGKYTKEPVKTQFGFHVILKEDSRPVTP--PPLEAVKEQLTP 257 Query: 295 TKIEKHEAEYVKKLRSNAIIHY 316 K E ++ LR A + Sbjct: 258 FLQRKKVQEMIETLRKQAKVEI 279 >gi|300691410|ref|YP_003752405.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Ralstonia solanacearum PSI07] gi|299078470|emb|CBJ51122.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Ralstonia solanacearum PSI07] Length = 637 Score = 79.3 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 41/407 (10%), Positives = 96/407 (23%), Gaps = 106/407 (26%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI------------ 60 + L+ V F + Y + S + VIT ++ R+ Sbjct: 1 MFLVLLILVFPSFVFFGVQGYSRFMDGSHDAAKVGDTVITTSELDTRVREQTERLRQMLG 60 Query: 61 -ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-------HARN 112 Q ++ + + +I + + E + ++ + V Q + Sbjct: 61 AQYDPRQFEGSQMRRDVLDGIIQQRVMVNEASRVNLSVADSKVRETIEQIPAVAQLRKPD 120 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------------------- 149 + + L QG+ F L + + + + Sbjct: 121 GKFDTDAYIKLLAAQGMTPEQFDARLRSELVLQQIPQSIVSTAFVPKSLVDRLIEARDQQ 180 Query: 150 ----------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG--- 196 D+ K + I A + ++ + Q Sbjct: 181 REVQALLLKPADYAGKVAVDDKAIQAYYDAHQQEFAVPEQVKAEYVVFSGEDMMKQIPVT 240 Query: 197 -FVQKRIKDAEESRLRLPKDCNKL------------------------------------ 219 K D +R + + Sbjct: 241 PEQLKEYYDQNAARFKTEEQRRAAHILIKLPDNAKPADKDAAKKRAEEVLAEVRKTPGNF 300 Query: 220 EKFASKIHDVSI-----GKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI 272 + A K G+ +L + P F+N L K + ++ + G I + Sbjct: 301 AELAKKYSGDPGSAAQGGELGFLAKGATVPPFENALFALKQPGDISDVVESDFGFHIIKL 360 Query: 273 CDKRD------LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + + L+ + Q K + + + + Sbjct: 361 EEVKGGGVQSLEAVKPELEREVRTQLANKKYTELADAFSNGVEDQSD 407 >gi|187928546|ref|YP_001899033.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii 12J] gi|187725436|gb|ACD26601.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii 12J] Length = 265 Score = 79.3 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 65/280 (23%), Gaps = 48/280 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +NG+ I + I Q + EL A L+ L +Q+ K G+ + Sbjct: 27 AAVVNGKAIPSAKVDALIKK-SGQPESPELRARARDMLVDRELIEQDAAKRGLLERDDIQ 85 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 +V +F N Sbjct: 86 EQLAAARL----------------------------------NVLVAAEFEDYVKNSPAT 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++ I + + + K + + Sbjct: 112 EDELHKQYDKIKAQFGNGKEYHAHHILVDKEADAKA------IIAKLKAGAKFEDIAKAQ 165 Query: 223 ASK-IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDL- 278 + + G + P+F L + T P TQ G I + D RD Sbjct: 166 SKDKGSGANGGDLDWANPGTYVPEFSAALTGLKKGQITQTPVKTQFGWHVIRLDDTRDAK 225 Query: 279 -GGEIALKAYLSAQNTPTK--IEKHEAEYVKKLRSNAIIH 315 +K L + +K LR A I Sbjct: 226 IPSYEEVKPQLLEMMMGDQNWQRSKFQAMLKDLREKAKIQ 265 >gi|146299709|ref|YP_001194300.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacterium johnsoniae UW101] gi|146154127|gb|ABQ04981.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacterium johnsoniae UW101] Length = 475 Score = 79.3 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 41/335 (12%), Positives = 97/335 (28%), Gaps = 26/335 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYK-------------SWAMSSRIRTTIN 47 + K+ D+ +LT F+L IV I T+ Sbjct: 2 LLKKLQLKTIDYKLVLTMCFLLFFTSIVSAQEIIKDVVAEKPAEPVHGKQKIDGIIATVG 61 Query: 48 GEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQEIEKSGITFDSN----T 101 ++ D DI K + Q I + +L+ + L + + I Sbjct: 62 DYIVLDSDIDKGYLEISSQGGNIKDITRCQMLGKLLEDKLYAHQAIQDSIIVSDAEVRGM 121 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 + + G + + + + + +++ + Sbjct: 122 MEERLNYMIQQVGDINKVVEYYKKSSVEEFKTYFADILKEQKLASEMRDKIVKDVEITPE 181 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 E+ +K+ + + + I ++ QK I R + + + K Sbjct: 182 EVRNFFRKIPKDELPTFGAEMEVAQIVVEPKVSKEDKQKVIDRLNAIRKDVLEGSSFATK 241 Query: 222 ---FASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276 ++ + G + ++ +F+++ + + P+ T G I + + Sbjct: 242 AVLYSQDPGSAPNGGYYKMTRKTPFVKEFKDVAFSLQEGEISAPFETTFGYHIIMVDKIK 301 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 E L+ L A K E + +R+ Sbjct: 302 GQEVE--LRHILIAPTVSESALKEAKERIANIRAK 334 >gi|68304918|gb|AAY89929.1| predicted survival protein surA [uncultured bacterium BAC13K9BAC] Length = 441 Score = 79.3 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 28/257 (10%), Positives = 79/257 (30%), Gaps = 6/257 (2%) Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 ++ + KI + V ++ + + + + Sbjct: 186 IQSYLKTNDSLKIINNIMTVREYLIEDENNKLDITKVDILVRNIKTNGLEDTYNRYPNIK 245 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 K Q+ + +N + + + + + + Sbjct: 246 IKINNLSEIPFTKLPDIYQNNLNILDQNSYTDLFKTGKGYVFLEVVSSSMYSEEY---KV 302 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESD 241 + N ++N +++R + + + +K++ K + G ++ + Sbjct: 303 SHILLKTNPMENLKSLKERFYKIKRDATKENNFSDYAQKYSLDKASAIKGGSLGWINKKL 362 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIEK 299 + P+F + + + P+ TQ G + + DKR + + A K++ Sbjct: 363 VVPEFGRIMSNMKIGGISEPFKTQFGWHILQLEDKRIKNISNDVARNQVVAILKERKVKV 422 Query: 300 HEAEYVKKLRSNAIIHY 316 + E++ KL+ A I Sbjct: 423 AKREWLAKLKDQAYIEI 439 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 121/317 (38%), Gaps = 14/317 (4%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 KV+ + + + F++I+F + +S + AM +I +N V+ +++ ++ Sbjct: 23 LEKVYQVIKTGLNMNNVKFLIILFFLT--ISNMAHAMEDKIIAVVNDNVVLKSELNNKLT 80 Query: 62 LLKL----QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 + L + +L++ + +LI E+L +Q + GI + A++ L+ Sbjct: 81 TINLEGTSRLEAAKLKREILDQLIEESLLEQAANRLGIYISDIDLQNRIKLIAQDKNLTV 140 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 ++ Q I + + L + ++ + F + E EI + + ++ Sbjct: 141 LQLKEAVESQNIDYLRYLKNLRKRIQIEELFRIQFTSRAYVSEEEIQSYLKTNDSLK--- 197 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 +I ++ + D ++ + ++ + ++ + Sbjct: 198 -IINNIMTVREYLIEDENNKLDITKVDILVRNIKTNGLEDTYNRYPNIKIKIN--NLSEI 254 Query: 238 LESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 + L +QN QN+ T+ + T KG ++ + + E +++ + P + Sbjct: 255 PFTKLPDIYQNNLNILDQNSYTDLFKTGKGYVFLEVVSS-SMYSEEYKVSHILLKTNPME 313 Query: 297 IEKHEAEYVKKLRSNAI 313 K E K++ +A Sbjct: 314 NLKSLKERFYKIKRDAT 330 >gi|299531702|ref|ZP_07045107.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas testosteroni S44] gi|298720418|gb|EFI61370.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas testosteroni S44] Length = 632 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 43/405 (10%), Positives = 100/405 (24%), Gaps = 102/405 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58 M + S F+ +L ++ F V + + + SS+ ++G IT D Sbjct: 1 MFESIR-KHSKFVMILLFLLIIPSFIFVGV-NQNYFTESSQTVARVDGHDITQQDWDNAH 58 Query: 59 --RIALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 L+ Q + E +++L+ + + K +T + + Sbjct: 59 RAESDRLRAQNPTMDAKLLDSPEARYATLEKLVRDRVLAAAAAKMHLTTPDAQLVRTLRE 118 Query: 109 -------HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------- 151 + L AE + + + QG+ F+ L + V+ + Sbjct: 119 IPAIASLQKPDGSLDAEAYKALVGSQGMTPEGFEANLRRELALNQVLGSVSSTSFTTAAQ 178 Query: 152 -----------------------FMLKYGNLEMEIPANKQKMKNITVR------------ 176 F K E E+ A + N + Sbjct: 179 LQQAMDALYQRREIQVARFDASAFAGKVQPTEAELKAFYEAHTNQFKQPEAATVEYVQLD 238 Query: 177 -----------------EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK- 218 Y + P+ + + + R + + Sbjct: 239 LAAVQQGIVLSEDDLRTYYKENAARLAGPEERRASHILINAARDLPAAEREKAKAKAEQL 298 Query: 219 ----------LEKFASKIH-----DVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYV 262 + A + G Y + F+ + K Q + ++ Sbjct: 299 LAQVRKDPKSFAQVAKANSQDPGSAANGGDLGYFGREAMVKPFEEAVFKMKQGDISDVVE 358 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + G I + + + + ++ + Sbjct: 359 SDFGFHIIELTGIKQPKV--PSFEEMRPKLEADLKQQQAQRKFAE 401 >gi|49185187|ref|YP_028439.1| peptidylprolyl isomerase [Bacillus anthracis str. Sterne] gi|49479990|ref|YP_036442.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|165870489|ref|ZP_02215143.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0488] gi|167633046|ref|ZP_02391372.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0442] gi|167639670|ref|ZP_02397940.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0193] gi|170687085|ref|ZP_02878304.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0465] gi|170706725|ref|ZP_02897184.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0389] gi|177649682|ref|ZP_02932684.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0174] gi|190565511|ref|ZP_03018431.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis Tsiankovskii-I] gi|196040038|ref|ZP_03107341.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus NVH0597-99] gi|218903473|ref|YP_002451307.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus AH820] gi|227814851|ref|YP_002814860.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. CDC 684] gi|229604551|ref|YP_002866676.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0248] gi|254684916|ref|ZP_05148776.1| peptidylprolyl isomerase [Bacillus anthracis str. CNEVA-9066] gi|254722324|ref|ZP_05184112.1| peptidylprolyl isomerase [Bacillus anthracis str. A1055] gi|254737363|ref|ZP_05195067.1| peptidylprolyl isomerase [Bacillus anthracis str. Western North America USA6153] gi|254743452|ref|ZP_05201137.1| peptidylprolyl isomerase [Bacillus anthracis str. Kruger B] gi|254751679|ref|ZP_05203716.1| peptidylprolyl isomerase [Bacillus anthracis str. Vollum] gi|254760198|ref|ZP_05212222.1| peptidylprolyl isomerase [Bacillus anthracis str. Australia 94] gi|301053856|ref|YP_003792067.1| peptidylprolyl isomerase [Bacillus anthracis CI] gi|46396831|sp|Q81QT1|PRSA3_BACAN RecName: Full=Foldase protein prsA 3; Flags: Precursor gi|49179114|gb|AAT54490.1| protein export protein prsA [Bacillus anthracis str. Sterne] gi|49331546|gb|AAT62192.1| protein export protein prsA [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164713644|gb|EDR19167.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0488] gi|167512379|gb|EDR87755.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0193] gi|167531858|gb|EDR94523.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0442] gi|170128456|gb|EDS97324.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0389] gi|170669136|gb|EDT19880.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0465] gi|172084756|gb|EDT69814.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0174] gi|190563538|gb|EDV17503.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis Tsiankovskii-I] gi|196029297|gb|EDX67901.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus NVH0597-99] gi|218538215|gb|ACK90613.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus AH820] gi|227007172|gb|ACP16915.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. CDC 684] gi|229268959|gb|ACQ50596.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0248] gi|300376025|gb|ADK04929.1| peptidylprolyl isomerase [Bacillus cereus biovar anthracis str. CI] Length = 283 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 30/308 (9%), Positives = 84/308 (27%), Gaps = 48/308 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 + L +++ + S + T + IT+ ++SK + + Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--ITEKELSKELR--------QKYG 50 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + + ++++ + + S + S+ ++ Sbjct: 51 ESTLYQMVLSKALLDKYKVSDEEAKKQVEE-------AKDKMGDNFKSTLEQVGLKNEDE 103 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 K+ + + + +K K + + Sbjct: 104 LKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD------------------- 144 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 +K K+ +E ++++ G+ +F+ K Sbjct: 145 -----EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEEAAYK 199 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKK 307 + P T G I + DK++L +K + +++ ++ V + Sbjct: 200 LDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQVVNE 259 Query: 308 LRSNAIIH 315 L +A I Sbjct: 260 LLKDADIK 267 >gi|260219734|emb|CBA26579.1| hypothetical protein Csp_E36670 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 587 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 43/403 (10%), Positives = 97/403 (24%), Gaps = 101/403 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--- 57 M V + L+ ++ F +V + YKS A T+ IT + Sbjct: 1 MFDFVRKHTKVLMFLMFL-LIIPAFVLVGVDGYKSMAGGGATVATVGNAKITQEEWDFAH 59 Query: 58 -KRIALLKLQKIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + L+ N E ++ L+ E + + ++ + +T + + Q Sbjct: 60 KNEVDRLRASVPNLDPKLLDSAEARYTTLERLVREKVMAEAVQTAHMTTSNARLARELQQ 119 Query: 109 H-------ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + + L E + QG+ F+ + V Sbjct: 120 NPTIASLRKPDGTLDMERYRQLAASQGLTPEGFEARVRRDLSLMQVESAVTGTAFSPKAL 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV----- 183 D+ K + +I A Q + Sbjct: 180 SDLALNAFFERREVQVLRFSPADYASKINPSDADIDAYFQANSALFQSTETANVEYVVLD 239 Query: 184 -----------------LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 F ++L + + + D K ++ A+ + Sbjct: 240 LEAVKKTVSVNEADLKSYFEQNASRLSAKEERRASHILINAPKDMPAADRAKAKERATAL 299 Query: 227 -----------------------HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYV 262 G + + F++ + ++ Sbjct: 300 LAQVRKAPDSFAEVAKKNSQDVGSAPRGGDLDFFGRGAMVKPFEDAAFSMKKGEISDLVE 359 Query: 263 TQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAE 303 + G I + D + + L + ++ AE Sbjct: 360 SDFGFHIIKLADVKGAKQPTFEEARVSLEPELRAQSAQRKFAE 402 >gi|291287880|ref|YP_003504696.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Denitrovibrio acetiphilus DSM 12809] gi|290885040|gb|ADD68740.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Denitrovibrio acetiphilus DSM 12809] Length = 633 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 33/287 (11%), Positives = 84/287 (29%), Gaps = 24/287 (8%) Query: 52 TDGDISKR--IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 TDG ++ + LL ++ ++ + +++ I + I +S D F Q+ Sbjct: 126 TDGQFDQQLYVQLLSRNRLTPQIFESSIRRDITLKKIEDLIRQSVAVSDQEVEQEFIYQN 185 Query: 110 ------------ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 G ++ ++ + + ++ Sbjct: 186 TVATIRYLELGADNFIGNVEITDNALTAFFDEHKEQYRVPEKADFKYVTFDPETYKGEFI 245 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSI---PDNKLQNQGFVQKRIKDAEESRLRLPK 214 + EI + K +R + + + ++ K + + Sbjct: 246 TSDKEIENYFIQNKASFNEPERVRAAHILFRVENWDDEKAATEIYQKAKKVRKEIVDGAD 305 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 EK++ + G+ + + P+F+N + ++ TQ G I + Sbjct: 306 FAKMAEKYSEDSTAQNGGELGFFTRGQMVPEFENAAFTTNPGEVSDVVKTQFGFHIINVE 365 Query: 274 DKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYV----KKLRSNAII 314 + +K ++A K +V K + + I Sbjct: 366 EYIPSTDPTLDEVKDEIAALIKDQKSASSFRTHVYDTYKAILDKSNI 412 Score = 43.5 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 36/326 (11%), Positives = 83/326 (25%), Gaps = 37/326 (11%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI-----RTTINGEVITDGDISKR 59 + +SL + KL+T +I V + + W + ++ ++G ITD + + Sbjct: 1 MISSLRNKKKLITFSLWFVIAAFVGTI-FFVWGVGDKVQSQLYAAKVDGVTITDQEFRDK 59 Query: 60 IALLKLQKIN------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + + Q LEK ++ LI ETL + E + I V Sbjct: 60 VENTRNQFRQLFGNNIDEILKGDTLEKTVMETLITETLLRNEANRLNIPASDAEVAANIQ 119 Query: 108 QHARNT--GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 G + L + + + I +++ + E+ Sbjct: 120 SVQAFQTDGQFDQQLYVQLLSRNRLTPQIFESSIRRDITLKKIEDLIRQSVAVSDQEVEQ 179 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + Y L + E + + Sbjct: 180 EFIYQNTVATIRY---LELGADNFIGNVEITDNALTAFFDEHKEQYRVPEKADFKYVTFD 236 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC---DKRDLGGEI 282 + +N +++ + P + + D++ Sbjct: 237 PETYKGEFI------TSDKEIENYFIQNKASFNEPERVRAAHILFRVENWDDEKAATEIY 290 Query: 283 ALKAYLSAQN-----TPTKIEKHEAE 303 + + EK+ + Sbjct: 291 QKAKKVRKEIVDGADFAKMAEKYSED 316 Score = 39.7 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 24/81 (29%), Gaps = 4/81 (4%) Query: 240 SDLHPQFQNLLKKSQNNTTNPYVT-QKGVEYIAICDKRD---LGGEIALKAYLSAQNTPT 295 ++ K + T V + + D + K + + Sbjct: 544 GMNARLMGDIFKAEPGDFIKDVYTVGSNVYIVQVKDIIKPDIATMDDQTKEQIKSSLFGV 603 Query: 296 KIEKHEAEYVKKLRSNAIIHY 316 K + YV+ L++NA I Sbjct: 604 KSNQAVQSYVENLKANAKIEI 624 >gi|315500239|ref|YP_004089042.1| ppic-type peptidyl-prolyl cis-trans isomerase [Asticcacaulis excentricus CB 48] gi|315418251|gb|ADU14891.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Asticcacaulis excentricus CB 48] Length = 332 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 29/320 (9%), Positives = 70/320 (21%), Gaps = 54/320 (16%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYK-----SWAMSSRIRTTINGEVITDGDISKRIALL 63 + + KL + ++ + I+G I D+ Sbjct: 1 MQRWTKLRQVAVLALVTLTIAGCDKPTLDERPPEPGDVAVARIDGHTIWASDVRYEAVQQ 60 Query: 64 KLQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 L L + ++E+I + L Q K GI Sbjct: 61 GLIGDGEPFDLASPLFRRTLEEVIDQKLLAQAALKKGIDRTELAQRRI------------ 108 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 + +++ + +++ ++Q E Sbjct: 109 ------------------AAAREDILGHMLLEQSVDASIDDKKVKDLYDEQVKLAQKSEE 150 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 R +L +Q + +E+ + + G Y Sbjct: 151 IRARLILVKTRPEADNVMRQLQ----------GGSLFEAMAMERSIDQATRFNGGDMGYF 200 Query: 238 LESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 + ++ + P G + ++R Sbjct: 201 TTDVIPESYRAALMTAKPGQIAGPVQIDGGWAVFKVEERRPEQPMTI--EEARPGIVSAL 258 Query: 297 IEKHEAEYVKKLRSNAIIHY 316 + + LR A + + Sbjct: 259 KLEQVRGLLGGLRDGARVEF 278 >gi|91788447|ref|YP_549399.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas sp. JS666] gi|91697672|gb|ABE44501.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas sp. JS666] Length = 261 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 85/305 (27%), Gaps = 49/305 (16%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELE 73 + F+L + A + +NG+ + + + ++E Sbjct: 1 MKKQFLLATAVAGLLAMGAQGAFAQN-VAIVNGKAVPKARLDSLAQQIARSGRPVTPDME 59 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +E+I + QE EK G++ + Sbjct: 60 NQLREEVIAREVFMQEAEKQGLSGTDDFKVQ----------------------------- 90 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + ++ + + +EY R +L Sbjct: 91 -MELARQTILIRELFADYQKKNPVTDADLKGEYDKFAAANGGKEYKARHIL--------- 140 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLK 251 + K S + K + +K + G + S P+F + LLK Sbjct: 141 --VEKEAEAKAIIASLKKGGKFEDIAKKQSKDPGSGAKGGDLDWANPSGYVPEFSEALLK 198 Query: 252 KSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 ++ T+ P +Q G I + D R+ + Q ++ A + + LR Sbjct: 199 LNKGQLTDAPVKSQFGYHVIRVDDIRNAQL--PSFEEVKPQIAQQMQQQKLATFQEDLRK 256 Query: 311 NAIIH 315 A I Sbjct: 257 KAKIE 261 >gi|121604733|ref|YP_982062.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas naphthalenivorans CJ2] gi|120593702|gb|ABM37141.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas naphthalenivorans CJ2] Length = 263 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 85/306 (27%), Gaps = 49/306 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GEL 72 ++ F+L + A++ +NG+ + + + E+ Sbjct: 2 IMKKQFLLATAMASLLALGAQGAIAQN-VAIVNGKAVPKTRLDALAQQVAKAGRPVTPEM 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 E +E+I + QE EK GI + Sbjct: 61 EGQLREEVIAREVFMQEAEKQGIAASDDFKAQ---------------------------- 92 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + ++ + + +EY R +L Sbjct: 93 --MELARQTLMIRELFASYQKKNPVTDADLKAEYDKFAAASGGKEYKARHIL-------- 142 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLL 250 + S + K + +K + G + S P+F + LL Sbjct: 143 ---VEKESEATAIIASLKKGGKFEDIAKKQSKDPGSGAKGGDLDWANPSSYVPEFTEALL 199 Query: 251 KKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 K ++ T+ P +Q G I + D R + Q ++ A + ++LR Sbjct: 200 KLNKGQMTDTPVKSQFGYHVIRVDDIRSAKL--PAFEEVKPQIAQQMQQQKLAAFQEELR 257 Query: 310 SNAIIH 315 A + Sbjct: 258 KKAKVE 263 >gi|119945205|ref|YP_942885.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychromonas ingrahamii 37] gi|119863809|gb|ABM03286.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychromonas ingrahamii 37] Length = 631 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 50/406 (12%), Positives = 101/406 (24%), Gaps = 94/406 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + +++ F + + SY + S + T+N E I+ + + Sbjct: 1 MLDKMREGAQGATAKIIIVVIILSFALAGVSSYLGGSGIS-VAVTVNDEEISKATVDQAY 59 Query: 61 ALLKLQ----------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + N ++ + A+Q +I E L Q I+ G+ V Sbjct: 60 QNERTRLEQQYGEQFALLASTPNFNQKIRQQAMQTVISERLLTQAIKDMGLRIGDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + + E + S L + F Q + ++ Sbjct: 120 EIRKMKEFQVDGNFNNEQYLSLLRRASYTPAQFSQSIKQDLARRQLLTMVLGSEFILPME 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRT------ 182 +DF K E EI + + Sbjct: 180 VQQANRLQAQKRVARVLTVKASDFADKDPISEQEISTYYENNSQFFQTAEQVSVDYVVLD 239 Query: 183 -------------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL---------- 219 L D + +KR K Sbjct: 240 GSLLADRVTLSSEELEKYYDMHASDYQRGEKRKVAHILLLGDNSAAKEKAQAILSELEEG 299 Query: 220 --------EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEY 269 +K + G+ + + P F + K +N +Q G Sbjct: 300 ADFAQLAAQKSEDSYSAENNGELDWFERGVMDPAFDDAAFKLTKEAPLSNIVKSQFGYHI 359 Query: 270 IAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 I + D ++ + A + ++ E ++L A Sbjct: 360 IKLVDIQESKKLPLSEVTAQVENAAKREEMNNLYYELHQRLSEAAF 405 >gi|237803592|ref|ZP_04591177.1| periplasmic folding chaperone [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025574|gb|EGI05630.1| periplasmic folding chaperone [Pseudomonas syringae pv. oryzae str. 1_6] Length = 627 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 64/194 (32%), Gaps = 6/194 (3%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 F + + ++ K+ F K + ++ A QK + + Sbjct: 215 KAHYDQHAKEFMSPEQVVLDYIELKKSSFFDKVQVKDEDLQAAYQKEIANLSEQRRAAHI 274 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 L N N + +I++ ++ + ++F+ G Y + Sbjct: 275 LI--EVNDKLNDEQAKAKIEEIQQRLAKGEDFAALAKEFSQDPGSSSKGGDLGYAGKGVY 332 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 P F+ L +++ + P T G I + + +LK L+ + +E+ Sbjct: 333 DPAFEEALYALNKDQVSQPVRTDFGWHLIKLLGVEAPSVPTFASLKGKLTDELKSQLVEQ 392 Query: 300 HEAEYVKKLRSNAI 313 E K+L +A Sbjct: 393 KFVEVTKQLEDSAF 406 Score = 62.8 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 28/326 (8%), Positives = 81/326 (24%), Gaps = 32/326 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + I + + + + +NGE I+ ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIVALMAFTGIEAMFTATSNKQNAAEVNGEDISQNELSQAV 60 Query: 61 ALLK-----------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + + L + A++ LI L Q + TF ++ Sbjct: 61 DMQRRQLAQQLSQQLGKDFDPALLDEKLLRESALKGLIDRKLLLQGASDAKFTFTDAALD 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE-ME 162 +Q F Q+ Q + +++ + Sbjct: 121 QQILQTPEFQVDGKFSADRFDQVIRQLGYSRMQF--RQMLGQEMLIGQVRAGVAGSAFVT 178 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + L + V+ + + + + Sbjct: 179 DAQVEAFARLEKQTRDFASLTLPADTSAVKVTDDEVKAHYDQHAKEFMSPEQVVLDYIEL 238 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGE 281 + + + + + N ++ I + DK + Sbjct: 239 KKSS---------FFDKVQVKDEDLQAAYQK--EIANLSEQRRAAHILIEVNDKLNDEQA 287 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKK 307 A + + + A+ + Sbjct: 288 KAKIEEIQQRLAKGEDFAALAKEFSQ 313 >gi|195936005|ref|ZP_03081387.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli O157:H7 str. EC4024] Length = 608 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 42/381 (11%), Positives = 99/381 (25%), Gaps = 85/381 (22%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----- 70 + +++ F + + Y ++ +N + I+ G + + Sbjct: 1 MIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAFNSERNRMQQQLGDQY 59 Query: 71 -----------ELEKIAVQELIVETLKKQEIEK-----------------SGITFDSNTV 102 L + + LI E L Q + D Sbjct: 60 SELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQAIFATPAFQVDGKFD 119 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDN--------HFKQYLAIQSIWPDVVKNDFML 154 N + G++A+ ++ L Q F + V + + Sbjct: 120 NSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGETDELAALVAQQRVVR 179 Query: 155 KYGNL-----------EMEIPANKQKMKNITVRE-------------------------- 177 + E EI + ++ KN + Sbjct: 180 EATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLDAATMQQPVSDADLQS 239 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE----KFASKIHDVSIGK 233 Y + + + K +A+ L K + K A I + G Sbjct: 240 YYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALAKEKSADIISARNGGD 299 Query: 234 AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQ 291 +L ++ + + +N K + + + G + + D + + ++ ++A+ Sbjct: 300 MGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPAKVKSLDEVRDDVAAK 359 Query: 292 NTPTKIEKHEAEYVKKLRSNA 312 K +K+ A Sbjct: 360 VKHEKALDAYYALQQKVSDAA 380 >gi|330952802|gb|EGH53062.1| periplasmic folding chaperone [Pseudomonas syringae Cit 7] Length = 627 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 64/194 (32%), Gaps = 6/194 (3%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 F + + ++ K+ F K + ++ A QK + + Sbjct: 215 KAHYDEHAKEFMSPEQVVLDYIELKKSSFFDKVQVKDEDLQAAYQKEIANLSEQRRAAHI 274 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 L N N + +I++ ++ + ++++ G Y + Sbjct: 275 LI--EVNDKLNDEQAKAKIEEIQQRLAKGEDFAALAKEYSQDPGSSNKGGDLGYAGKGVY 332 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 P F+ L +++ + P T G I + + +LK+ L+ +E+ Sbjct: 333 DPAFEEALYALNKDQVSQPVRTDFGWHLIKLLGVEAPSVPTFASLKSKLTNDLKSQLVEQ 392 Query: 300 HEAEYVKKLRSNAI 313 E K+L +A Sbjct: 393 KFVEVTKQLEDSAF 406 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 28/327 (8%), Positives = 81/327 (24%), Gaps = 33/327 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + I + + + + +NGE I+ ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIIALMAFTGIEAMFTATSNKQNAAEVNGEDISQNELSQAV 60 Query: 61 ALLK-----------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + + L + A++ LI L Q + +F ++ Sbjct: 61 DMQRRQLAQQLSQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGAADAKFSFSDAALD 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE-ME 162 +Q F Q+ Q + +++ + Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRLQF--RQMLGQEMLIGQVRAGVAGSAFVT 178 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + L + V+ + + + + + Sbjct: 179 DAQVEAFARLEKQTRDFASLTLPADTSAVKVTDDEVKAHYDEHAKEFMSPEQVVLDYIEL 238 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGE 281 + + + + + N ++ I + DK + Sbjct: 239 KKSS---------FFDKVQVKDEDLQAAYQK--EIANLSEQRRAAHILIEVNDKLNDEQA 287 Query: 282 IALKAYLSAQNTP-TKIEKHEAEYVKK 307 A + + EY + Sbjct: 288 KAKIEEIQQRLAKGEDFAALAKEYSQD 314 Score = 37.0 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 28/254 (11%), Positives = 68/254 (26%), Gaps = 9/254 (3%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 +L +L+ + + + DS + Q A++ GL + + F + G Sbjct: 378 KSKLTNDLKSQLVEQKFVEV----TKQLEDSAFESSDLSQPAQDLGLKVQTTAPFGREGG 433 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 G + + + + + + K + L Sbjct: 434 EGLTANRAVIQAAFSPEVLEEGANSNTLELDPETVVVVRSKEHLQPQQLPLESVASSIRA 493 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246 ++ K +A + LR K ++ + + + L F Sbjct: 494 QLVKEHASAAAKAKGEALLAGLREGKIPLAAKQDGRDWKMMEAVTRSQEGVDPQVLQTLF 553 Query: 247 QNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAE 303 + ++ + + + + KA + ++ A Sbjct: 554 RMPKPTGKDKPEFASITASDGSFVIVRLNGVNQAAAPTDAEKAQYRRFLASREGQQDFAA 613 Query: 304 YVKKLRSNAIIHYY 317 Y +L S A I + Sbjct: 614 YRAQLESKAKIEKF 627 >gi|313679080|ref|YP_004056819.1| ppic-type peptidyl-prolyl cis-trans isomerase [Oceanithermus profundus DSM 14977] gi|313151795|gb|ADR35646.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oceanithermus profundus DSM 14977] Length = 621 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 31/327 (9%), Positives = 90/327 (27%), Gaps = 32/327 (9%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL-- 65 +++ +L F + + + R +NG+ I + ++ ++ L Sbjct: 7 AITIIFGILAAAFAIGTIFLFT--PQGNPQQEGRPILYVNGQPINELELMRKAQTNPLFT 64 Query: 66 QKINGELEKIA----VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 G L + ++++I +Q+ + S+ V Q G++ + Sbjct: 65 LNPTGVLRPLIDTYFLEQVITLEALRQDAARIR--VSSSEVKQQVDQLRERLGVTDREGY 122 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 + + + + ++ K + E + K E ++ Sbjct: 123 DRFLQSIGYTDSQLRDEIRTQLRIQKRIDELRKKVKLTDEEARFYYELHKGEYAAEDRVK 182 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + D +Q + + +++ + G S Sbjct: 183 ARQIVLDDQATADQV---------YKQLIGGADFAELARQYSK-VGAEQGGAVGAEPGSS 232 Query: 242 LH----------PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLS 289 P + + T T + + + G + + Sbjct: 233 EPGPVTRLVFPTPVADAVFQLKSGGMTEVIETGGRYYIVKVEEFLPGGDVPYEEVADRVK 292 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K Y++++R A++ + Sbjct: 293 SDALSVKQNGAVENYIREVRDRAVVKF 319 >gi|302879437|ref|YP_003848001.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gallionella capsiferriformans ES-2] gi|302582226|gb|ADL56237.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gallionella capsiferriformans ES-2] Length = 261 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 74/285 (25%), Gaps = 47/285 (16%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKINGELEKIAVQELIVETLKKQEIE 91 + +N I+ + + L + Q EL K + +LI + Q Sbjct: 19 NPAFAEDKSAAVVNKVAISQERVEMNVKSALAQGQADTPELRKAILDDLINREVMAQAAT 78 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 SG+ ++ V + V+ Sbjct: 79 ASGLDKSADVVQQI------------------------------NLAKQTVLINAFVQEQ 108 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + +EY R +L + ++ + Sbjct: 109 LKKNPVTDAQLQAGYETLKSKLGDKEYSARHIL-----------VATEAEARNLIAQLGK 157 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQY-LLESDLHPQFQNLLKKSQNNTTN-PYVTQKGVEY 269 K EK G + + ++ + P LL + T P TQ G Sbjct: 158 KAKFEKLAEKSKDTGSAERGGALGWTVPKNFVEPFANALLNLKKGEYTKDPVQTQFGWHV 217 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I + D R L + Q ++ + + LR+ A I Sbjct: 218 IKLDDMRALKV--PSFDEIKPQLLQRLQQQAIQKIITDLRAAAKI 260 >gi|229070337|ref|ZP_04203584.1| Foldase protein prsA 1 [Bacillus cereus F65185] gi|229080050|ref|ZP_04212578.1| Foldase protein prsA 1 [Bacillus cereus Rock4-2] gi|228703174|gb|EEL55632.1| Foldase protein prsA 1 [Bacillus cereus Rock4-2] gi|228712775|gb|EEL64703.1| Foldase protein prsA 1 [Bacillus cereus F65185] Length = 303 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 86/305 (28%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 L V+ + +S + S I TT +G I++ D +K++ K Sbjct: 24 LKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGK 74 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E D Sbjct: 75 QNLSEMVVEKVLNDKYKVTDEEVT---------------KQLKELKDKMGDNFNTYMESN 119 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + V L++ Sbjct: 120 GVKNEDQLKEKLKLTFAFEKAIKATVTEKDIKDHYKPKLQVSHILVK------------- 166 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G+ + +F++ K Sbjct: 167 ---DEKTAKEIKEKLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 223 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + DK++L K + + +I+ + + ++L Sbjct: 224 EVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRELLK 283 Query: 311 NAIIH 315 NA I Sbjct: 284 NADIK 288 >gi|171463167|ref|YP_001797280.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192705|gb|ACB43666.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 270 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 92/306 (30%), Gaps = 45/306 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRI--RTTINGEVITDGDISKRIALLKLQKING-- 70 ++ + + IF + + I ++NG +IT+ + + I Q Sbjct: 1 MMVRFIAVGIFAGASLGHTWAQQSGLPINAAASVNGVIITNDMVEQGIKAALSQGQKDSP 60 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 EL K V++ I L Q+ EK G+ R L+ + S+++ K I Sbjct: 61 ELRKAVVEKFIKVLLLSQQAEKDGLANSERANTQL--AMIRQNYLADLEMSTYMSKNPIT 118 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 D + + K ++ + Sbjct: 119 DADVQAEYNKEIASLSPQGMIVEYKVSDIAV----------------------------- 149 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL- 249 + + A + + + + V G ++ + PQ + Sbjct: 150 ------ATEADAQAALARIKKGEAFDKVAKSVSLAPNKVQGGAVGWIQPGQVAPQLASTL 203 Query: 250 LKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 S+ + P Q+G I + DK+ ++ ++ + E++ ++ Sbjct: 204 TTLSKGQVSPAPIQMQQGWYLIKLEDKK--SSKLPSFEQAKQAIRTGLTQRKQFEFLGQI 261 Query: 309 RSNAII 314 +A I Sbjct: 262 AKDAKI 267 >gi|283779709|ref|YP_003370464.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pirellula staleyi DSM 6068] gi|283438162|gb|ADB16604.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pirellula staleyi DSM 6068] Length = 490 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 25/282 (8%), Positives = 73/282 (25%), Gaps = 15/282 (5%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + GD + I + E+ K + + + K+ + + Sbjct: 189 DMKVLYGDFERNIEKNAGRDKLDEIRKNIDRRMRDQFEKELASMREKVRKAKPAELQAML 248 Query: 107 ----------VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 + + + D L K G ++Y ++ V + Sbjct: 249 ARDPQMPVVAMLMEEHQIENLGDLDLLLRKYGSSLEKTQRYYRESTLGRSQVAENVREIP 308 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + Q + R + S+ + + I Sbjct: 309 EVTHKAMLDYYQSHAEDFALQARARFEMMSVKFVGFPTRQAAYQTIGQMGNEVFYGAPFE 368 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICD 274 + +K++ G + + L + + + + ++G + + + Sbjct: 369 SVAKKYSQDPSASRGGYFDWTQQGALSTEVLDRAVFSLEPGKLSQILEDERGYYIVRVIE 428 Query: 275 KRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + G + + E++ Y+ K++ I Sbjct: 429 REEAGSVPFEVAQTKIKDAIETQYREENYRNYLTKVKQQTTI 470 >gi|297587540|ref|ZP_06946184.1| peptidyl-prolyl cis-trans isomerase [Finegoldia magna ATCC 53516] gi|297574229|gb|EFH92949.1| peptidyl-prolyl cis-trans isomerase [Finegoldia magna ATCC 53516] Length = 321 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 36/321 (11%), Positives = 82/321 (25%), Gaps = 20/321 (6%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------- 69 F+ I+ ++ ++ I E I D+ K + K Sbjct: 1 MKKFLAIVLAVMMVMVTGCSKKPDGAVAKIGKEYIYQKDVDKVMEDYKQYYGQDIFNPNT 60 Query: 70 -------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 +++ + LI E + + ++ I V + + G + + Sbjct: 61 EQGKEALKQIQPKIIDMLINEKIANKLMKDKKIEVSDKEVQAEVDKLQKQLGGADKFKEQ 120 Query: 123 FLDKQGIGD--NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + DF ++ E N L Sbjct: 121 LKKENMTEQALKEQIEKQLKNKKLSQQFEKDFKPSDKEIKDEFDKNLDTYTQYNADHILF 180 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLE 239 + + E + + + GK L Sbjct: 181 SGKDDKGKNLDDAKLKAKSELANKTYEEVKDGKNFNEVAKAKSEDPSAKQNSGKLGDFLS 240 Query: 240 SDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTK 296 S + +F + K + P T+ G I + K + A K + + Sbjct: 241 STMVKEFSDALKKMKPGEVSKPVKTEFGYHIIKLNSKVTELDKMTDANKQNVKTAISNKI 300 Query: 297 IEKHEAEYVKKLRSNAIIHYY 317 I++ + +K + + + Y Sbjct: 301 IQEKVQKEFEKQKKDMGVKIY 321 >gi|325498268|gb|EGC96127.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia fergusonii ECD227] Length = 611 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 38/384 (9%), Positives = 98/384 (25%), Gaps = 85/384 (22%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 + + +++ F + + Y ++ +NG+ I+ G + + Sbjct: 1 MLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNGQEISRGQFENAFNSERNRMQQQLG 59 Query: 71 --------------ELEKIAVQELIV-----------------ETLKKQEIEKSGITFDS 99 L + + LI E +K+ D Sbjct: 60 DQYSELAANEGYMKTLRQQVLNRLIDEALLDQYSRDLKLGISDEQVKQAIFATPAFQVDG 119 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN--------HFKQYLAIQSIWPDVVKND 151 N + G+SA+ ++ L Q F + V + Sbjct: 120 KFDNSRYNAILNQMGMSADQYAQALRNQLTTQQLINGIAGTDFMLKGETDELAALVSQQR 179 Query: 152 FMLKYGNL-----------EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + + EI + + KN V R + +Q Sbjct: 180 VVREATIDVNAKAEKQQVSDAEITSYYDQHKNNFVTPEQFRVSYIMLDAANIQQPVSDAD 239 Query: 201 RIKDAEESRLRL-----------------------------PKDCNKLEKFASKI-HDVS 230 ++ + + ++ ++ I + Sbjct: 240 IQAYYDQHQDQFTQPQRVRYSIIQTKTENEAKAVLDALNNGGDFAELAKEKSADIISARN 299 Query: 231 IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYL 288 G +L +S + ++ K + + + G + + D + + ++ + Sbjct: 300 GGDLGWLEDSTTPQELKDAGLKDKGQLSGVIKSSVGFLVVRLDDVQPAKVKTLAEVRDDI 359 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNA 312 +A+ K +K+ A Sbjct: 360 AAKVKHEKALDAYYALQQKVSDAA 383 >gi|66044996|ref|YP_234837.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. syringae B728a] gi|63255703|gb|AAY36799.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. syringae B728a] Length = 627 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 63/194 (32%), Gaps = 6/194 (3%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 F + + ++ K+ F K + ++ A QK + + Sbjct: 215 KAHYDEHAKEFMSPEQVVLDYIELKKSSFFDKVQVKDEDLQAAYQKEIANLSEQRRAAHI 274 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 L N N + +I++ ++ + ++++ G Y + Sbjct: 275 LI--EVNDKLNDEQAKAKIEEIQQRLAKGEDFAALAKEYSQDPGSSNKGGDLGYAGKGVY 332 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 P F+ L +++ + P T G I + + +LK L+ +E+ Sbjct: 333 DPAFEEALYALNKDQVSQPVRTDFGWHLIKLLGVEAPSVPSFASLKGKLTNDLKSQLVEQ 392 Query: 300 HEAEYVKKLRSNAI 313 E K+L +A Sbjct: 393 KFVEVTKQLEDSAF 406 Score = 63.5 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 28/327 (8%), Positives = 82/327 (25%), Gaps = 33/327 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + I + + + + +NGE I+ ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIIALMAFTGIEAMFTATSNKQNAAEVNGEDISQNELSQAV 60 Query: 61 ALLK-----------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + + L + A++ LI L Q + +F ++ Sbjct: 61 DMQRRQLAQQLSQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGAADARFSFSDAALD 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE-ME 162 +Q + F Q+ Q + +++ + Sbjct: 121 QQLLQTPEFQVDGKFNADRFDQVIRQLGYSRLQF--RQMLGQEMLIGQVRAGVAGSAFVT 178 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + L + V+ + + + + + Sbjct: 179 DAQVEAFARLEKQTRDFASLTLPADTSAVKVTDDEVKAHYDEHAKEFMSPEQVVLDYIEL 238 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGE 281 + + + + + N ++ I + DK + Sbjct: 239 KKSS---------FFDKVQVKDEDLQAAYQK--EIANLSEQRRAAHILIEVNDKLNDEQA 287 Query: 282 IALKAYLSAQNTP-TKIEKHEAEYVKK 307 A + + EY + Sbjct: 288 KAKIEEIQQRLAKGEDFAALAKEYSQD 314 Score = 36.6 bits (82), Expect = 4.9, Method: Composition-based stats. Identities = 29/254 (11%), Positives = 70/254 (27%), Gaps = 9/254 (3%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 G+L +L+ + + + DS + Q A++ GL + + F + G Sbjct: 378 KGKLTNDLKSQLVEQKFVEV----TKQLEDSAFESSDLSQPAQDLGLKVQTTAPFGREGG 433 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 G + + + + + + K + L Sbjct: 434 EGLTANRAVIQAAFSPEVLEEGANSNTLELDPETVVVVRSKEHLQPQQLPLESVASSIRA 493 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246 ++ K +A + LR K ++ + + + L F Sbjct: 494 QLVKEHASAAAKAKGEALLAGLRDGKIPLAAKQEGRDWKVMEAVTRSQEGVDPQVLQTLF 553 Query: 247 QNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAE 303 + ++ + + + + KA + + ++ A Sbjct: 554 RMPKPTGKDKPEFASITASDGSFVIVRLNGVNQAAAPTDAEKAQYRRFLSSREGQQDFAA 613 Query: 304 YVKKLRSNAIIHYY 317 Y +L S A I + Sbjct: 614 YRAQLESKAKIEKF 627 >gi|86130559|ref|ZP_01049159.1| peptidylprolyl isomerase [Dokdonia donghaensis MED134] gi|85819234|gb|EAQ40393.1| peptidylprolyl isomerase [Dokdonia donghaensis MED134] Length = 484 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 32/284 (11%), Positives = 81/284 (28%), Gaps = 14/284 (4%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKI--NGELEKIAVQELIVETLKKQEIEKSGITF 97 + + +I + DI K ++ +K Q + + L+ L + + + Sbjct: 62 DGVAGVVGEYLILESDIDKFLSDIKNQGQAASEVTPCQVMGNLLESKLLAHQAVQDSLIV 121 Query: 98 DSNTVN----YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 VN + + G + + + I +++ + + Sbjct: 122 QDARVNSEVDQIIQRFSSQLGSEQKVVEFYKKDNMADLRAELFGIRKDIILSELMNDKII 181 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK----DAEESR 209 E+ + + V + + I ++ QK I + Sbjct: 182 ETVDVTPDEVKTFFESIPEDQVPTVGVELEISRIVIEPKASEEERQKVIDRLKGFRRDIL 241 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKK-SQNNTTNPYVTQKGV 267 K + S G + + L +F+++ + P+ T+ G Sbjct: 242 ENGSSFATKAVLYTQDPGSRSEGGLMVIDRNTPLVKEFRDVAFSLQDGEISEPFETEFGF 301 Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + R + ++ L E+ + VK +R Sbjct: 302 HIVYVEKTRGERKD--IRHILLVPEIKEAQEEEAKDLVKLVRKR 343 >gi|302876602|ref|YP_003845235.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium cellulovorans 743B] gi|307687276|ref|ZP_07629722.1| peptidylprolyl isomerase [Clostridium cellulovorans 743B] gi|302579459|gb|ADL53471.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium cellulovorans 743B] Length = 339 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 36/335 (10%), Positives = 95/335 (28%), Gaps = 26/335 (7%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL-- 63 ++ + + ++I I A + ++ + + IT G++ + Sbjct: 1 MKNIKKLVTAVMLGTMIISVSACGIAEKTPAAKAKQVVAKVGEKKITRGEVDTAMQSYID 60 Query: 64 --------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN----TVNYF 105 + K + ++ ++ L Q IE + + + + + Sbjct: 61 EAKAKYGEKYETSKEAMKSINAQREAQLKNMVDTELMLQYIEDNNLEINMDEINSETDKE 120 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + + G E + K + D K + E+ Sbjct: 121 IEKMKTDYGQGDEQKYIDVLKNAGFTPESFKEYTKNRKLTDKAKEAIGKDITVSDEELAT 180 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + T + + I ++ +++ ++ A + +K++ Sbjct: 181 SFNEETFKTEKANIKHVQYILIKNDANEDKAKNKEIADAALAEIKGGLSFADAAKKYSED 240 Query: 226 IH-DVSIGKAQYLL-ESDLHPQF-QNLLKKSQNNTTNPYVTQ-KGVEYIAICDKRDLGGE 281 + G + +S L F + L + + G I + Sbjct: 241 SSTSQTGGYLGEVTDQSQLVEGFLKAALALNPGQVSEIIDEPTYGFFIIKALPIEEAIPF 300 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K+ A K E +++LRS+ + Y Sbjct: 301 EKEKS--KASLLQEKQSSKYTEVLEQLRSDKVKEY 333 >gi|110803835|ref|YP_699739.1| peptidylprolyl isomerase [Clostridium perfringens SM101] gi|123047143|sp|Q0SQ68|PRSA_CLOPS RecName: Full=Foldase protein prsA; Flags: Precursor gi|110684336|gb|ABG87706.1| putative foldase protein PrsA [Clostridium perfringens SM101] Length = 342 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 39/333 (11%), Positives = 89/333 (26%), Gaps = 24/333 (7%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 S+ + ++ +V A+ T+NGE IT G++ + + Sbjct: 1 MVSVKKIVASALVGVLMFSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFT 60 Query: 66 QKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 Q + + + + L+ E + E K I +N Q Sbjct: 61 QMKSQYGDKYMDDPQVAQQILQQRQGILNSLVEEKILVVEANKENIVPSEEELNKKIEQQ 120 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + + + +G N + + + + QK Sbjct: 121 IKLYKEQYGEEGYKKAVESMGYNEDTFK---EYLKNQFIADAAASNASKDIKVTDEEAQK 177 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE--KFASKIH 227 + +++ ++ +N+ QK + + + K E K K Sbjct: 178 YYDENKKQFEVQAKGVLARHLLFENEEEAQKAYDEIQSGKTTFNDLFTKYENNKLEKKTP 237 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI---CDKRDLGGEIAL 284 + L + + P TQ G I +K + Sbjct: 238 IAESFVVPDENAQVAKEFVEGLKSLKEGEISKPIKTQFGYHIIQAGATYEKGAQLPFNEV 297 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 K+ + K + + + + + + Y Sbjct: 298 KSQIIQILKQQKDSQKLKSDMDQWKKDLNVKVY 330 >gi|147119|gb|AAA24304.1| unknown [Escherichia coli str. K-12 substr. W3110] Length = 98 Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 34/92 (36%), Gaps = 2/92 (2%) Query: 227 HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIAL 284 G + P F++ + ++ + P + G I + D R++ + A Sbjct: 4 SANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQ 63 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K K + A ++++ R++A + Sbjct: 64 KDRAYRMLMNRKFSEEAASWMQEQRASAYVKI 95 >gi|229143873|ref|ZP_04272292.1| Foldase protein prsA 2 [Bacillus cereus BDRD-ST24] gi|228639634|gb|EEK96045.1| Foldase protein prsA 2 [Bacillus cereus BDRD-ST24] Length = 285 Score = 79.3 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 33/304 (10%), Positives = 76/304 (25%), Gaps = 43/304 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F++ + ++S S T IT LK + L ++ Sbjct: 4 KHIFIITALISILMLSACGQKNGSATVATATDSTITK---DNFEKQLKDRYGKDMLYEMM 60 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 Q++I + K VN + + G F ++ Sbjct: 61 AQDIITKKYK----------VPDEEVNKEVEKVKKQYG------DQFKKVLENYGLKDEE 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + +++ + Sbjct: 105 DFKNQIKFKLAMNEAIKKSITEKDVKD--------------------HYKPEIKASHILV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + K+ + ++ + + G Y + P+F+ K + Sbjct: 145 SDENEAKEIKSKLDAGASFEELAKQESQDLLSKDKGGDLGYFNSGTMAPEFETAAYKLNI 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNA 312 +NP + G I + DK+ L +K + + + +++ A Sbjct: 205 GQISNPVKSSNGYHVIKLTDKKALKPYDEVKDSIRKNLEEERTADPVFSKKLLQEELKKA 264 Query: 313 IIHY 316 I Sbjct: 265 NIKI 268 >gi|229151073|ref|ZP_04279281.1| Foldase protein prsA 1 [Bacillus cereus m1550] gi|228632384|gb|EEK89005.1| Foldase protein prsA 1 [Bacillus cereus m1550] Length = 303 Score = 79.3 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 85/305 (27%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 L V+ + +S + S I TT +G I++ D +K++ K Sbjct: 24 LKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGK 74 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E D Sbjct: 75 QNLSEMVVEKVLNDKYKVTDEEVT---------------KQLKELKDKMGDNFNTYMESN 119 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + V L++ Sbjct: 120 GVKNEDQLKEKLKLTFAFEKAIKATVTEKDIKDHYKPKLQVSHILVK------------- 166 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G+ + +F++ K Sbjct: 167 ---DEKTAKEIKEKLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 223 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + DK++L K + + +I+ + + + L Sbjct: 224 EVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRDLLK 283 Query: 311 NAIIH 315 NA I Sbjct: 284 NADIK 288 >gi|229110311|ref|ZP_04239883.1| Foldase protein prsA 1 [Bacillus cereus Rock1-15] gi|228673051|gb|EEL28323.1| Foldase protein prsA 1 [Bacillus cereus Rock1-15] Length = 303 Score = 78.9 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 86/305 (28%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 L V+ + +S + S I TT +G I++ D +K++ K Sbjct: 24 LKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGK 74 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E D Sbjct: 75 QNLSEMVVEKVLNDKYKVTDEEVT---------------KQIKELKDKMGDNFNTYMESN 119 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + V L++ Sbjct: 120 GVKNEAQLKEKLKLTFAFEKAIKATVTEKDIKDHYKPKLQVSHILVK------------- 166 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G+ + +F++ K Sbjct: 167 ---DEKTAKEIKEKLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 223 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + DK++L K + + +I+ + + ++L Sbjct: 224 EVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKDNIRKELEQQRIQDPQFHQQVTRELLK 283 Query: 311 NAIIH 315 NA I Sbjct: 284 NADIK 288 >gi|153951819|ref|YP_001397624.1| hypothetical protein JJD26997_0433 [Campylobacter jejuni subsp. doylei 269.97] gi|152939265|gb|ABS44006.1| conserved hypothetical protein [Campylobacter jejuni subsp. doylei 269.97] Length = 271 Score = 78.9 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 80/296 (27%), Gaps = 32/296 (10%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 I+ S S + I ++ E IT DI + + LK+ A+ LI Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKALKID------RNKALGILIN 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E ++ ++++ GI + ++ + + F + L + F+ Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLTQNKTTLNAFKANLKSKNQSYEQFRANFKKDL 117 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + A K +N + + N Q ++ Sbjct: 118 EKRKL-YEKISNMAKTDFSDDGAKKFFEQNKDKFTFYTQINANIYLSNNPQTLENIKNTK 176 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 K + + + L + + + Sbjct: 177 KIILKPQNASLN-----------------------TSNTDPRLLGLLSQIPVGDFSPVLN 213 Query: 263 TQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G E + K +K + + + +Y KLRS I Y Sbjct: 214 GKNGYELYEVKSKDGAQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 269 >gi|332284989|ref|YP_004416900.1| putative peptidyl-prolyl cis-trans isomerase [Pusillimonas sp. T7-7] gi|330428942|gb|AEC20276.1| putative peptidyl-prolyl cis-trans isomerase [Pusillimonas sp. T7-7] Length = 258 Score = 78.9 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 91/278 (32%), Gaps = 46/278 (16%) Query: 43 RTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 T+NG+ IT + + +ALL Q + EL QE++ + Q EK+G D Sbjct: 22 VATVNGKAITQDKLDQFVALLIEQGAQDTPELRTQVKQEMVNRLVAVQAAEKAG--IDKQ 79 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 ++ AR L + L K + + Sbjct: 80 AAVKQEIELARQGILVRALMADHLKKNP---------------------------VTDAK 112 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 ++ +K K +EY +R +L + + + + Sbjct: 113 IQAEYDKIKKLQADKQEYKVRHILV----------KDQKAAEDLTAAIKSKKVTFEAAAK 162 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRD 277 K + + G + ++ P+F + ++K + T P +Q G I + D RD Sbjct: 163 KDSIDPGSGKNGGDLGWAPSTNYVPEFADAVEKLKKGQMTDKPVQSQFGWHIIQVDDTRD 222 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + Q ++ AE+ L NA I Sbjct: 223 VKFPELA--EVKPQIEEMLRQQQLAEFQDSLMKNADIK 258 >gi|317153443|ref|YP_004121491.1| hypothetical protein Daes_1733 [Desulfovibrio aespoeensis Aspo-2] gi|316943694|gb|ADU62745.1| hypothetical protein Daes_1733 [Desulfovibrio aespoeensis Aspo-2] Length = 372 Score = 78.9 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 92/312 (29%), Gaps = 30/312 (9%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + + V ++F ++ S + I +NGE I + + +++ + G + Sbjct: 1 MFRKFAVFMVFILLAGCSDTVDEI--GIVARVNGEPIYLSQLEFQHDQFQVETVGGYVPS 58 Query: 75 ---------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 + ELIV+ L QE+ I + + + + F L Sbjct: 59 VEKLKAEYGEILTELIVQELVVQELVNQDIGVTDHELLKAEEEVRTD--YPEGAFDQMLV 116 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 ++ I ++ L + +E + + +R +L Sbjct: 117 EEYIDLKTWRLQLRNHLAMRKFFHQVLRPQIKIDYLEAERYYRDRISDFYLPESLR-ILV 175 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 ++ V+K + ++ L + + L E L Sbjct: 176 VRGPSREIVGKAVEKFRAERDQVDLATAFGEVQTREVV-------------LREERLSTI 222 Query: 246 FQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEA 302 ++N + + G E + + ++ +AY + K++ Sbjct: 223 WKNALTGLKAGQASGVLTDRFGFEILVLLERSPAKVLEPAQAYPLVEKALLEIKLQDAFD 282 Query: 303 EYVKKLRSNAII 314 + + A I Sbjct: 283 AWFSSTVARASI 294 >gi|330972584|gb|EGH72650.1| periplasmic folding chaperone [Pseudomonas syringae pv. aceris str. M302273PT] Length = 627 Score = 78.9 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 63/194 (32%), Gaps = 6/194 (3%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 F + + ++ K+ F K + ++ A QK + + Sbjct: 215 KAHYDEHAKEFMSPEQVVLDYIELKKSSFFDKVQVKDEDLQAAYQKEIANLSEQRRAAHI 274 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 L N N + +I++ ++ + ++++ G Y + Sbjct: 275 LI--EVNDKLNDEQAKAKIEEIQQRLAKGEDFAALAKEYSQDPGSSNKGGDLGYAGKGVY 332 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 P F+ L +++ + P T G I + + +LK L+ +E+ Sbjct: 333 DPAFEEALYALNKDQVSQPVRTDFGWHLIKLLGVEAPSVPSFASLKGKLTNDLKSQLVEQ 392 Query: 300 HEAEYVKKLRSNAI 313 E K+L +A Sbjct: 393 KFVEVTKQLEDSAF 406 Score = 63.5 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 27/326 (8%), Positives = 83/326 (25%), Gaps = 31/326 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + I + + + + +NGE I+ ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIIALMAFTGIEAMFTATSNKQNAAEVNGEDISQNELSQAV 60 Query: 61 ALLK-----------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + + L + A++ LI L Q + +F ++ Sbjct: 61 DMQRRQLAQQLSQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGATDAKFSFSDAALD 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 A + + + D+ + + ++ G+ + Sbjct: 121 QQL-LQAPEFQVDGKFNADRFDQVIRQLGYSRLQFRQMLGQEMLIGQVRAGVAGSAFVTD 179 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + L + V+ + + + + + Sbjct: 180 AQVEAFARLEKQTRDFASLTLPADTSAVKVTDDEVKAHYDEHAKEFMSPEQVVLDYIELK 239 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGEI 282 + + + + + N ++ I + DK + Sbjct: 240 KSS---------FFDKVQVKDEDLQAAYQK--EIANLSEQRRAAHILIEVNDKLNDEQAK 288 Query: 283 ALKAYLSAQNTP-TKIEKHEAEYVKK 307 A + + EY + Sbjct: 289 AKIEEIQQRLAKGEDFAALAKEYSQD 314 Score = 36.6 bits (82), Expect = 5.1, Method: Composition-based stats. Identities = 29/254 (11%), Positives = 70/254 (27%), Gaps = 9/254 (3%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 G+L +L+ + + + DS + Q A++ GL + + F + G Sbjct: 378 KGKLTNDLKSQLVEQKFVEV----TKQLEDSAFESSDLSQPAQDLGLKVQTTAPFGREGG 433 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 G + + + + + + K + L Sbjct: 434 EGLTANRAVIQAAFSPEVLEEGANSNTLELDPETVVVVRSKEHLQPQQLPLESVASSIRA 493 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246 ++ K +A + LR K ++ + + + L F Sbjct: 494 QLVKEHASAAAKAKGEALLAGLRDGKIPLAAKQEGRDWKVMEAVTRSQEGVDPQVLQTLF 553 Query: 247 QNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAE 303 + ++ + + + + KA + + ++ A Sbjct: 554 RMPKPTGKDKPEFASITASDGSFVIVRLNGVNQAAAPTDAEKAQYRRFLSSREGQQDFAA 613 Query: 304 YVKKLRSNAIIHYY 317 Y +L S A I + Sbjct: 614 YRAQLESKAKIEKF 627 >gi|317504767|ref|ZP_07962726.1| peptidyl-prolyl cis-trans isomerase [Prevotella salivae DSM 15606] gi|315664098|gb|EFV03806.1| peptidyl-prolyl cis-trans isomerase [Prevotella salivae DSM 15606] Length = 480 Score = 78.9 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 32/288 (11%), Positives = 82/288 (28%), Gaps = 17/288 (5%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEI 90 ++ + + E I DI + +++ + G + +++ V+ L + Sbjct: 47 IPEHSVIDEVEWVVGDEPIMKSDIEQMRLQGEIEGMKWGGNPDCRIPEQIAVQKLFLHQA 106 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 I + + Q S + QG + + L +++ Sbjct: 107 ILDSIEVTESDIAQTVEQQINLWINSVGSKEKLEEYQGKSISQIRSDLHDDVKNSKMIQQ 166 Query: 151 ---DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 M ++ + + ++ + + Q + + Sbjct: 167 MKRKIMGNVSVTPADVRRYFKNLPEDSIPFIPTEVEVEILVRKPRIPQSEINRIKDQLRN 226 Query: 208 SRLRLPKDCNKLEKFASKIHD-----VSIGKAQYLLESDLHPQFQNLLKKSQN--NTTNP 260 R+ K A + G+ Y L P F ++ + + Sbjct: 227 FTDRVNKGETSFSTLARLYSEDPGTSRQGGEMDYTGRGTLDPAFASVAFNLTDPKKISKI 286 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++ G I + DKR G+ ++ TP + + + +L Sbjct: 287 VESEFGYHIIQLIDKR---GDKIKVRHIL--LTPKVSNEDMNKALSRL 329 >gi|65319635|ref|ZP_00392594.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Bacillus anthracis str. A2012] Length = 283 Score = 78.9 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 29/308 (9%), Positives = 83/308 (26%), Gaps = 48/308 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 + L +++ + S + + IT+ ++SK + + Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSDNVVXSKVGN--ITEKELSKELR--------QKYG 50 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + + ++++ + + S + S+ ++ Sbjct: 51 ESTLYQMVLSKALLDKYKVSDEEAKKQVEE-------AKDKMGDNFKSTLEQVGLKNEDE 103 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 K+ + + + +K K + + Sbjct: 104 LKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD------------------- 144 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 +K K+ +E ++++ G+ +F+ K Sbjct: 145 -----EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEEAAYK 199 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKK 307 + P T G I + DK++L +K + +++ ++ V + Sbjct: 200 LDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQVVNE 259 Query: 308 LRSNAIIH 315 L +A I Sbjct: 260 LLKDADIK 267 >gi|288803875|ref|ZP_06409300.1| putative PPIC-type PPIASE domain protein [Prevotella melaninogenica D18] gi|288333640|gb|EFC72090.1| putative PPIC-type PPIASE domain protein [Prevotella melaninogenica D18] Length = 488 Score = 78.9 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 25/302 (8%), Positives = 86/302 (28%), Gaps = 35/302 (11%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K +T F +I+ ++ + + ++ + TING+ ++ + G + Sbjct: 10 VKRITMKFKVILSALL-LSTTMAYGQTDPTIMTINGQPVSRSEFEYSYN---KNNAEGVI 65 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 +K +V E + + + ++ + +T++ F + + Sbjct: 66 DKKSVDEYVDLFINYKLKVQAALDAHLDTLSSFKKEFLSYRNQQVRPTFITDADVEAEGH 125 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + Q + ++ + Sbjct: 126 KLYREAQQQV----------------------------EANGGMWNCAHILIGLYQNADK 157 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL-L 250 + ++ + +K+++ ++ G+ +L + P+F+ Sbjct: 158 EAAEAAKQLADSLYNALRGGADFAELAKKYSTDVNSAMNGGQLLHLQKGQTVPEFEKALF 217 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLR 309 + P ++ G I + + L+ + E+ + + + Sbjct: 218 ALKPGEISAPVLSPFGYHIIKMGGRESFPTYETLRPEIMQYIEMQGLREQIIDQKLDSIV 277 Query: 310 SN 311 + Sbjct: 278 ES 279 >gi|300022454|ref|YP_003755065.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hyphomicrobium denitrificans ATCC 51888] gi|299524275|gb|ADJ22744.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hyphomicrobium denitrificans ATCC 51888] Length = 292 Score = 78.9 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 28/280 (10%), Positives = 74/280 (26%), Gaps = 43/280 (15%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 +++G VI+ I+ + + A +I E L ++ Sbjct: 33 VSVDGIVISSKAIAAEVQNFPSRNPGEGWLAAARALVIRELLLQEA-------------- 78 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + + +++ +V+ + + Sbjct: 79 --------------------RRLNIVAEPKADVDGREETVDDALVRGLIEREVRVPVADE 118 Query: 164 -----PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR-LRLPKDCN 217 + + + Y +L + + ++R + Sbjct: 119 ATSHRFYENNRRRFTSAALYEADHILIGARRDDDASYAAARERATSIAAVLATEPDQFAE 178 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276 +++ G + D +F+ L + + P T+ GV I + + Sbjct: 179 LARAWSACPSATLGGSLGQIAPGDTTEEFEAALVSLAPGEISGPVETRYGVHVIRLNRRI 238 Query: 277 DLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + A++ + A + A+Y+ L A I Sbjct: 239 EGNTLPFEAVRERIEAYLDDHVRRQATAQYIALLVGRADI 278 >gi|330975097|gb|EGH75163.1| periplasmic folding chaperone [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 393 Score = 78.9 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 60/172 (34%), Gaps = 6/172 (3%) Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 ++ K+ F K + ++ A QK + +L N N + +I++ Sbjct: 3 ELKKSSFFDKVQVKDEDLQAAYQKEIANLSEQRRAAHILI--EVNDKLNDEQAKAKIEEI 60 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 ++ + ++++ G Y + P F+ L +++ + P T Sbjct: 61 QQRLAKGEDFAALAKEYSQDPGSSNKGGDLGYAGKGVYDPAFEEALYALNKDQVSQPVRT 120 Query: 264 QKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 G I + + +LK L+ +E+ E K+L +A Sbjct: 121 DFGWHLIKLLGVEAPSVPTFASLKGKLTNDLKSQLVEQKFVEVTKQLEDSAF 172 Score = 37.7 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 29/254 (11%), Positives = 69/254 (27%), Gaps = 9/254 (3%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 G+L +L+ + + + DS + Q A++ GL + + F + G Sbjct: 144 KGKLTNDLKSQLVEQKFVEV----TKQLEDSAFESSDLSQPAQDLGLKVQTTAPFGREGG 199 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 G + + + + + + K + L Sbjct: 200 EGLTANRAVIQAAFSPEVLEEGANSNTLELDPETVVVVRSKEHLQPQQLPLESVASSIRA 259 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246 ++ K +A + LR K ++ + + + L F Sbjct: 260 QLVKEHASAAAKAKGEALLAGLRDGKIPLAAKQEGRDWKMMEAVTRSQEGVDPQVLQTLF 319 Query: 247 QNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAE 303 + ++ + + + + KA + ++ A Sbjct: 320 RMPKPTGKDKPEFASITASDGSFVIVRLNGVNQAAAPTDAEKAQYRRFLASREGQQDFAA 379 Query: 304 YVKKLRSNAIIHYY 317 Y +L S A I + Sbjct: 380 YRAQLESKAKIEKF 393 >gi|319654014|ref|ZP_08008107.1| hypothetical protein HMPREF1013_04726 [Bacillus sp. 2_A_57_CT2] gi|317394336|gb|EFV75081.1| hypothetical protein HMPREF1013_04726 [Bacillus sp. 2_A_57_CT2] Length = 290 Score = 78.9 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 97/306 (31%), Gaps = 37/306 (12%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 KLL + + + S + + + I+ D+ + + Sbjct: 3 KLLISLSTAGLLIGLSACSSSQASDNDEVIAETKAGNISSDDLYIAMK--------EKYG 54 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A+QEL+ + + + + + D + + + S+F + Sbjct: 55 EQALQELLYKKVLEDKYKVEKEELD-----------KKVKEIKDQAGSNFEALLMQNNIK 103 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 ++ L +V+ + + E+ + + K +++ Sbjct: 104 DEKELKEILKEQLLVEKAAIQDIKVTDKELKESYENYKPEIKARHILL------------ 151 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 +K KD + K + ++F+ G + + P+F+ Sbjct: 152 ---EDEKTAKDIKNRLNDGEKFEDLAKEFSKDPGSAEDGGDLGWFGSGKMVPEFEEAAYA 208 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI-EKHEAEYVKKLRS 310 N ++P TQ G I + +K++ ++ L Q +KI E +KK Sbjct: 209 LEVNKFSDPIKTQNGYHIIQVTEKKEKESFEYMRKELEYQLKVSKIDNSKIEEVMKKEFE 268 Query: 311 NAIIHY 316 +A + Sbjct: 269 DAKVKI 274 >gi|302187980|ref|ZP_07264653.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. syringae 642] Length = 627 Score = 78.9 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 64/194 (32%), Gaps = 6/194 (3%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 F + + ++ K+ F K + ++ A QK + + Sbjct: 215 KAHYDEHAKEFMSPEQVVLDYIELKKSSFFDKVQVKDEDLQAAYQKEIANLSEQRRAAHI 274 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 L N N+ + +I++ ++ + ++++ G Y + Sbjct: 275 LI--EVNDKLNEEQAKAKIEEIQQRLAKGEDFAALAKEYSQDPGSSNKGGDLGYAGKGVY 332 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 P F+ L +++ + P T G I + + +LK L+ +E+ Sbjct: 333 DPAFEEALYALNKDQVSQPVRTDFGWHLIKLLGVEAPSVPTFASLKGKLTNDLKSQLVEQ 392 Query: 300 HEAEYVKKLRSNAI 313 E K+L +A Sbjct: 393 KFVEVTKQLEDSAF 406 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 28/327 (8%), Positives = 81/327 (24%), Gaps = 33/327 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + I + + + + +NGE I+ ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIIALMAFTGIEAMFTATSNKQNAAEVNGEDISQNELSQAV 60 Query: 61 ALLK-----------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + + L + A++ LI L Q + +F ++ Sbjct: 61 DMQRRQLAQQLSQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGAADAKFSFSDAALD 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE-ME 162 +Q F Q+ Q + +++ + Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRLQF--RQMLGQEMLIGQVRAGVAGSAFVT 178 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + L + V+ + + + + + Sbjct: 179 DAQVEAFARLEKQTRDFASLTLPADTSAVKVTDDEVKAHYDEHAKEFMSPEQVVLDYIEL 238 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGE 281 + + + + + N ++ I + DK + Sbjct: 239 KKSS---------FFDKVQVKDEDLQAAYQK--EIANLSEQRRAAHILIEVNDKLNEEQA 287 Query: 282 IALKAYLSAQNTP-TKIEKHEAEYVKK 307 A + + EY + Sbjct: 288 KAKIEEIQQRLAKGEDFAALAKEYSQD 314 Score = 36.6 bits (82), Expect = 4.9, Method: Composition-based stats. Identities = 29/254 (11%), Positives = 69/254 (27%), Gaps = 9/254 (3%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 G+L +L+ + + + DS + Q A++ GL + + F + G Sbjct: 378 KGKLTNDLKSQLVEQKFVEV----TKQLEDSAFESSDLSQPAQDLGLKVQTTAPFGREGG 433 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 G + + + + + + K + L Sbjct: 434 EGLTANRAVIQAAFSPEVLEEGANSNTLELDPETVVVVRSKEHLQPQQLPLESVASSIRA 493 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246 ++ K +A + LR K ++ + + + L F Sbjct: 494 QLVKEHASAAAKTKGEALLAGLRDGKIPLAAKQEGRDWKMMEAVTRSQEGVDPQVLQTLF 553 Query: 247 QNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAE 303 + ++ + + + + KA + ++ A Sbjct: 554 RMPKPTGKDKPEFASITASDGSFVIVRLNGVNQAAAPTDAEKAQYRRFLASREGQQDFAA 613 Query: 304 YVKKLRSNAIIHYY 317 Y +L S A I + Sbjct: 614 YRAQLESKAKIEKF 627 >gi|297538002|ref|YP_003673771.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylotenera sp. 301] gi|297257349|gb|ADI29194.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylotenera sp. 301] Length = 262 Score = 78.9 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 90/298 (30%), Gaps = 48/298 (16%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDG--DISKRIALLKLQKINGELEKIAVQELI 81 V I+S A ++ T+NG+ I D + A + QK++ ++++ +LI Sbjct: 6 TLIAVAILSLAPAAFAADAVATVNGKQIKQSVYDYIAKDAASRGQKVDDQVKQAITNKLI 65 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 L QE +K G+ ++ V + + Sbjct: 66 DSELVYQEAQKLGLDKQADYVARE------------------------------ELSRRE 95 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + +++ + A +Q K +EY R +L + Sbjct: 96 LLTSAYLQDFVKKNPISDADTKAAYEQYKKAYGDKEYSARHIL-----------VKTEAE 144 Query: 202 IKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 KD + ++ + G + + + F + + + + Sbjct: 145 AKDIIAQLGKGADFAKLAKEKSMDPGSKEKGGDLGWFSPATMVKPFSDAVAGLQKGAVSA 204 Query: 260 -PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P TQ G I + D R + +++ + + LR+ A I Sbjct: 205 TPAQTQFGWHVIKLVDTRSAQP--LPYDKVKDGLQKNLQQRNLEKMMSDLRTKAKIDI 260 >gi|113461230|ref|YP_719299.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus somnus 129PT] gi|112823273|gb|ABI25362.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus somnus 129PT] Length = 618 Score = 78.9 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 32/393 (8%), Positives = 92/393 (23%), Gaps = 82/393 (20%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG----DI 56 + K+ + S + + + + F + + Y + + +NGE I+ Sbjct: 2 LMEKLNNASSGIVSKIIFGLIGVSFVLSGVAGYM-FIRTDTSVAKVNGEEISQQVFLQQY 60 Query: 57 SKRIALLKLQ----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 + L L + LI + L +Q ++ + V+ Sbjct: 61 NNEYQRLSENLGAKFAEVADSAAKHLRHEVLDRLINQELLRQYAQELKLGISDKQVSLAI 120 Query: 107 ---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML--------- 154 + + L GI + + Y+ + + + Sbjct: 121 VNSPMFQNEGKFDNKIYQQILASSGISSDTYAAYVREGLVLEQLQQGIANSDFQVPIQLN 180 Query: 155 ------------------------KYGNLEMEIPANKQKMKNIT---------------- 174 K E EI Q K Sbjct: 181 ELAKNFFQRRDVRLAVLSLDDEMQKQTVTEQEIEQYYQANKANFAVPERVKVQYLDLTRA 240 Query: 175 ---VREYLIRTVLFSIPDNKLQNQGFV---------QKRIKDAEESRLRLPKDCNKLEKF 222 + + + + ++ + + + + Sbjct: 241 IADQKVKISDIEIAQYYQDNKAQYITKHLAHIQLPTEQEAQSVYANLQNGEDFAALAKLY 300 Query: 223 A-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + + G +++ + F++ + + + P I + D + Sbjct: 301 SMDTLSAPKGGDLDWVVNGMMPLAFESAVTLLNVGEYSQPVKVDNAYHIIKVLDMKTREL 360 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++ ++ + + K++ A Sbjct: 361 -NDVREEIATKLRNDLVTNAFYSLEKQMNEKAF 392 >gi|229108609|ref|ZP_04238221.1| Foldase protein prsA 1 [Bacillus cereus Rock1-15] gi|228674864|gb|EEL30096.1| Foldase protein prsA 1 [Bacillus cereus Rock1-15] Length = 286 Score = 78.9 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 86/304 (28%), Gaps = 45/304 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + ++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYNQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKDVDKKFD--------EMKKQYGDQFDTLLKQQGIKEETIK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q ++ K + + Sbjct: 104 TGVRAQLAQEKAIEKTITDKELKENYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G Y + +F++ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGYFTAGKMVKEFEDAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSN 311 ++ + P +Q G I + D ++ +K + K + + + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTDIKEQKPFDEVKGDIKKDLVQKKAQDAAFMNDLMMKEIKK 259 Query: 312 AIIH 315 A + Sbjct: 260 ADVK 263 >gi|317475723|ref|ZP_07934982.1| ppic-type ppiase domain-containing protein [Bacteroides eggerthii 1_2_48FAA] gi|316908106|gb|EFV29801.1| ppic-type ppiase domain-containing protein [Bacteroides eggerthii 1_2_48FAA] Length = 541 Score = 78.9 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 32/307 (10%), Positives = 90/307 (29%), Gaps = 39/307 (12%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 F + F K++ L + + + + +A + ING+ + + K Sbjct: 16 FDFVRFFKKVIMIKSCLAVIFLW--LGWNVFAQQDPVLMRINGKDVLRSEFEYSYNRDKS 73 Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 L+ + + + + Sbjct: 74 LL---ALKHATLGKYVEYFV-------------------------------NFKLKVGDA 99 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + D F +++ +V++ + + +R + Sbjct: 100 EAAGLDTAFAFREEVENYRARLVESYLTDTVEADAAARRWYDRMKARHRGGQVRVRHIFK 159 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 +P N + D+ LR N + D ++ + + Sbjct: 160 YLPQNVSSDALRDAVARMDSIHEYLRKNPGDNAFNACVERFSDDK-RSL-WVSWLQMPVE 217 Query: 246 FQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+++ + + P+ T +G+ + + ++R+L +K + A+ + + ++ Sbjct: 218 FEDVAFELPVGGVSQPFFTPQGIHIVKVLERRELPPFEKVKDEIMARQSRHEADRGVEVQ 277 Query: 305 VKKLRSN 311 V+KL+ Sbjct: 278 VEKLKKE 284 >gi|229173017|ref|ZP_04300568.1| Foldase protein prsA 1 [Bacillus cereus MM3] gi|228610350|gb|EEK67621.1| Foldase protein prsA 1 [Bacillus cereus MM3] Length = 288 Score = 78.9 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 30/312 (9%), Positives = 85/312 (27%), Gaps = 48/312 (15%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKIN 69 + +L L +++ + S + T + +T+ ++SK + Sbjct: 2 RYFELKKNKLFLGTIISCVVLALSACGSSDNVVTSKVGN--VTEKELSKELR-------- 51 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + + + ++++ + + S + S+ Sbjct: 52 QKYGESTLYQMVLSKALLDKYKVSDEEAKKQVEE-------AKDKMGDNFKSTLEQVGLK 104 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 ++ K+ + + + +K K + + Sbjct: 105 NEDELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD--------------- 149 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN 248 +K K+ +E ++++ G+ +F+ Sbjct: 150 ---------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEE 200 Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY--- 304 K + P T G I + DK++L +K + +++ ++ Sbjct: 201 AAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDQIRKDLEQQRLQDTTGKWKQQ 260 Query: 305 -VKKLRSNAIIH 315 V L +A I Sbjct: 261 VVNDLLKDADIK 272 >gi|225181417|ref|ZP_03734860.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dethiobacter alkaliphilus AHT 1] gi|225167815|gb|EEG76623.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dethiobacter alkaliphilus AHT 1] Length = 319 Score = 78.9 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 26/305 (8%), Positives = 83/305 (27%), Gaps = 35/305 (11%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-----------LEKIAVQELI 81 ++ +NGE IT ++ + +L L + +E + ++ Sbjct: 25 GCGGNSAANTVANVNGEEITRAELDAYMNVLALFMPELQQMLESEELRGMIEGEILSVMV 84 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + +Q + G++ + + + G +++ + K+ + + Sbjct: 85 QNVVVEQAAKDLGLSVSDEELQAEYEEFRAMMGGMSDEDFQEVLKEYDINEEDLKQSLRA 144 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 ++ D ++ F + +++ ++ + +LF + L+ + + Sbjct: 145 DVYVDKLEQHFASDITDEDIQAFIDENPSFGRQPATLELSHILFDEEEEALEARERILA- 203 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL----------LESDLHPQFQ-NLL 250 + + + + G Y + + Sbjct: 204 ----------GEDFGDLAVELSQDPTAQNEGHPGYRGYLGDNIAEDTQDFWSDFMEGANN 253 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + P TQ G I + + +++ + + Sbjct: 254 ISEDGEVSPPVETQGGWHLIKLHARTPEV--ELSFEEAREDAFVALSVDLMNQHLDGVFA 311 Query: 311 NAIIH 315 A I Sbjct: 312 AAEIE 316 >gi|149194720|ref|ZP_01871815.1| possible periplasmic protein [Caminibacter mediatlanticus TB-2] gi|149135143|gb|EDM23624.1| possible periplasmic protein [Caminibacter mediatlanticus TB-2] Length = 271 Score = 78.9 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 44/296 (14%), Positives = 94/296 (31%), Gaps = 31/296 (10%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 I+ +++ + + R+ +NGE IT DI+K L + + A+ LI + Sbjct: 4 FILILIFLNFVNAKIVDRVVAVVNGEPITSYDITKTFKSLNIS------PREALNILIDQ 57 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + + EI++ GI D + + A+ G+S +F ++L + N+F + L Sbjct: 58 KIIENEIKRRGIEVDDFDIENAIEKIAKQNGMSVFEFKNYLK-ERGEYNNFLKNLKKDIQ 116 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + K E+ + K + + ++ ++ K+ Sbjct: 117 KQKLFAQIVNSKLKVSNKELKNFYDQNKEKFTT---FKQIEVIEYISQNPDELKHIKKNP 173 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263 S +++ K + + T Sbjct: 174 LYNSSNIKIENRVFKYNQIPLN-------------------LMFLFNSTKEGEFTPIINN 214 Query: 264 QKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 I K + + +K ++ Q K EY L++ A I + Sbjct: 215 GNSYVMFYINKKEGKVILPFEQIKNIIANQLMQQKRNAILKEYFNTLKNQADIEIF 270 >gi|320325365|gb|EFW81432.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. glycinea str. B076] Length = 627 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 64/194 (32%), Gaps = 6/194 (3%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 F + + ++ K+ F K + ++ A QK + + Sbjct: 215 KAHYDQHAKEFMSPEQVVLDYIELKKSSFFDKVQVKDEDLQAAYQKEIANLSEQRRAAHI 274 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 L N N + +I++ ++ + ++++ G Y + Sbjct: 275 LI--EVNDKLNDEQAKAKIEEIQQRLAKGEDFAALAKEYSQDPGSSSKGGDLGYAGKGVY 332 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 P F++ L +++ + P T G I + + +LK L+ +E+ Sbjct: 333 DPAFEDTLYALNKDQVSQPVRTDFGWHLIKLLGVEAPSVPTFASLKDKLTTDLKSQLVEQ 392 Query: 300 HEAEYVKKLRSNAI 313 E K+L ++ Sbjct: 393 KFVEVTKQLEDSSF 406 Score = 55.8 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 28/327 (8%), Positives = 78/327 (23%), Gaps = 33/327 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + I + + + + +NGE I+ ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIIALMAFTGIEALFTATSNKQNAAEVNGEDISQNELSQAV 60 Query: 61 ALL-----------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + L + A++ LI L Q + +F ++ Sbjct: 61 DMQRRQLAQQLAQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGATDAKFSFSDAALD 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE-ME 162 +Q F Q+ Q + +++ + Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRLQF--RQMLGQEMLIGQVRAGVAGSAFVT 178 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + L + V+ + + + + Sbjct: 179 DAQVDAFARLEKQTRDFASLTLPADTTAVKVTDDEVKAHYDQHAKEFMSPEQVVLDYIEL 238 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGE 281 + + + + + N ++ I + DK + Sbjct: 239 KKSS---------FFDKVQVKDEDLQAAYQK--EIANLSEQRRAAHILIEVNDKLNDEQA 287 Query: 282 IALKAYLSAQNTP-TKIEKHEAEYVKK 307 A + + EY + Sbjct: 288 KAKIEEIQQRLAKGEDFAALAKEYSQD 314 Score = 36.2 bits (81), Expect = 6.3, Method: Composition-based stats. Identities = 28/254 (11%), Positives = 66/254 (25%), Gaps = 9/254 (3%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 +L +L+ + + + DS+ + Q A++ GL + + F + G Sbjct: 378 KDKLTTDLKSQLVEQKFVEV----TKQLEDSSFESSDLSQPAQDLGLKVQTTAPFGREGG 433 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 G + + + + + + K + L Sbjct: 434 EGITANRAVIQAAFSPEVLEEGSNSNTLELDPETVVVVRSKEHLQPQQLPLESVASSIRT 493 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246 ++ K +A + LR K ++ + + + L F Sbjct: 494 QLVKEHATAAAKAKGEALLAGLRDGKIPLAAKQDGRDWKSMEAVTRSQEGVDPQVLQTLF 553 Query: 247 QNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAE 303 + + + + + KA ++ A Sbjct: 554 RMPKPDGKGKPEFASITAADGSFVIVRLNGVNQAAAPTDAEKAQYRRFLASRAGQQDFAA 613 Query: 304 YVKKLRSNAIIHYY 317 Y +L S A I + Sbjct: 614 YRAQLESKAKIEKF 627 >gi|298373303|ref|ZP_06983292.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroidetes oral taxon 274 str. F0058] gi|298274355|gb|EFI15907.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroidetes oral taxon 274 str. F0058] Length = 448 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 29/275 (10%), Positives = 74/275 (26%), Gaps = 16/275 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71 + ++I + + + + I ++ ++ + + + Sbjct: 1 MKRLTIIITILCSLSAASAQKRVIDGVVWIVGENSILRSEVEEQRQMANYNGVKFDGDPN 60 Query: 72 ---LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 E+IAVQ+L + I + + Q+ G + F Sbjct: 61 CLIAEQIAVQQLFLHQASLDSIVANEGQVSTRVNMQ-INQYIAEIGSQEKLEEYFKKSIN 119 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + Q + + V+ + E+ + MK ++ + I Sbjct: 120 EIREELFEAIKRQMVVQE-VQQKIIGNNKMSPSEVRKFFESMKPDSIPTMPATVEVQVIR 178 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-----SIGKAQYLLESDLH 243 ++ + R+ K A + G + + Sbjct: 179 LEPNITDAQREEVKNRLRDLAERVNKGNADFTMLARLYSEDEGTSKQGGSLGFFGRGMME 238 Query: 244 PQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKR 276 P+F N+ + T G I + +K+ Sbjct: 239 PEFSNVAFDLHEPGKVSRVVETIYGYHIIQLVEKK 273 >gi|322434836|ref|YP_004217048.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidobacterium sp. MP5ACTX9] gi|321162563|gb|ADW68268.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidobacterium sp. MP5ACTX9] Length = 662 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 25/239 (10%), Positives = 61/239 (25%), Gaps = 7/239 (2%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + + SG + S D +F Sbjct: 186 VSDNAVRDSYRVSGTKVKFDYAVITSDTLRATVNPSDSDLQTFFKTNQARYATAVPESRK 245 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + K + ++ + + I + Sbjct: 246 LNYFAFGADQIPGGKPQVTDADLQTYYNAHLAQYQVKDQAKVRHILIAVPAGADARTDAA 305 Query: 201 RIKDAEESRLRLPK---DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 A++ ++ + K + + G+ +L P+F + Sbjct: 306 AKAKADDLLKQIKAGGNFADLASKNSDDPGSKANGGELGFLSPGQTVPEFDKASFSLKPG 365 Query: 256 NTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 T++ T+ G + + ++++ +KA ++ K EA Y K L A Sbjct: 366 QTSDVIKTKFGYHILQVEERQNAHTKPLNEVKAEITPIVEQQKFGNAEAAYAKSLSDEA 424 Score = 43.9 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 15/149 (10%), Positives = 36/149 (24%), Gaps = 8/149 (5%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF--ASKIHDVSIGK 233 + + + +++ + L + K D+ Sbjct: 497 PTFDAYKSHILDDYRAEKVPQLLNEKLNKLDARAKELNDLHKAAAELNIPVKSSDLVGKD 556 Query: 234 AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA--YLSAQ 291 Q + ++ +NP T + + DK++ + K Sbjct: 557 GQVPDLGAMSGPGAPAFDLAKGTVSNPINTGSNGIVLVVTDKQEPSADDIAKNFTATREG 616 Query: 292 NTPTKIEKHEAEYVKKLRSNAI----IHY 316 + E+ Y+ L I Y Sbjct: 617 LLNERREEVFRLYLGTLTEKYQKSGGIRY 645 Score = 38.9 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 31/279 (11%), Positives = 68/279 (24%), Gaps = 17/279 (6%) Query: 47 NGEV-ITDGDISKRIALLKLQKINGELEKIAVQELI------VETLKKQEIEKSGITFDS 99 G+ +TD D+ Q + K LI K+ Sbjct: 258 GGKPQVTDADLQTYYNAHLAQYQVKDQAK-VRHILIAVPAGADARTDAAAKAKADDLLKQ 316 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 F A ++ + + S + ++K Sbjct: 317 IKAGGNFADLASKNSDDPGSKANGGELGFLSPGQTVPEFDKASFSLKPGQTSDVIKTKFG 376 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + +++ + + + + K N + E + + K Sbjct: 377 YHILQVEERQNAHTKPLNEVKAEITPIVEQQKFGNAEAAYAKSLSDEARKNGIDKTAAAH 436 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQF---QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 A+ +GK + K + + T G + D + Sbjct: 437 GLHATTTDF--VGKDGVVPGVSDSTALLAQAFTTTKKGDPIS--VSTGDGFAIFQVVDIQ 492 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 A K+++ K+ + E + KL + A Sbjct: 493 APHAPTFDAYKSHILDDYRAEKVPQLLNEKLNKLDARAK 531 >gi|291166314|gb|EFE28360.1| peptidylprolyl isomerase Pr [Filifactor alocis ATCC 35896] Length = 365 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 37/327 (11%), Positives = 100/327 (30%), Gaps = 31/327 (9%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI------- 68 + + +I + + + ++ ++NG+ I K + L Sbjct: 1 MKKWNKVIASVVSATLLFAGCSIGGDAVASVNGQKIGKDVYEKTLGLYSPSYEMQFGPDI 60 Query: 69 -----------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 + + ++ ++++I + + Q+ K +T +N F + ++ S Sbjct: 61 WNTEIESGVTFSQKFQEEILEKMINDEIILQDAAKKELTVSVEEINTQFDELKKS-IDSQ 119 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 E F S L+ GI D K+ + + + + T + Sbjct: 120 EQFKSILESNGIDDEFLKEQVKKDMTVKKYYDTLMQENEVKEDEVRKYYDEHIDEFTSSQ 179 Query: 178 YLIRTVLFSIPDNKL------QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVS 230 +LF+ D + ++ + + K++ + Sbjct: 180 VKASHILFAKKDFDKNEELSKEEVAKKKELAEKVLGMAKNGQNFADLAMKYSDDTGSAKN 239 Query: 231 IGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYL 288 G Y ++ + +F + Q + ++ T+ G I + DK++ + + Sbjct: 240 GGDLGYFDKNTMVKEFSDAAFSMKQGDISDSIVETEFGFHIIKLFDKKE---NVEKFEDV 296 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + L+ A + Sbjct: 297 KQSIASNLQYQKYESVIDGLKKAAKVK 323 >gi|217031935|ref|ZP_03437437.1| hypothetical protein HPB128_3g54 [Helicobacter pylori B128] gi|298736882|ref|YP_003729412.1| peptidylprolyl isomerase [Helicobacter pylori B8] gi|216946404|gb|EEC25009.1| hypothetical protein HPB128_3g54 [Helicobacter pylori B128] gi|298356076|emb|CBI66948.1| peptidylprolyl isomerase [Helicobacter pylori B8] Length = 299 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 30/281 (10%), Positives = 76/281 (27%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G IT D I +L++ + LI + + Sbjct: 40 SSAGVLATVDGRPITKSDFD-MIKQRNPNFDFDKLKEKEKEALIDQAI-------RTALV 91 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 ++ + L + + + + K Sbjct: 92 ENEAKTEKLDSTPEFKAMMEAVKKQALVEFWAKK-----------------QAEEVKKIQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKTKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + F + + N T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMALDFSKAAFALTPGNYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295 >gi|289679420|ref|ZP_06500310.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. syringae FF5] gi|330897791|gb|EGH29210.1| periplasmic folding chaperone [Pseudomonas syringae pv. japonica str. M301072PT] gi|330939710|gb|EGH43005.1| periplasmic folding chaperone [Pseudomonas syringae pv. pisi str. 1704B] Length = 627 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 63/194 (32%), Gaps = 6/194 (3%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 F + + ++ K+ F K + ++ A QK + + Sbjct: 215 KAHYDEHAKEFMSPEQVVLDYIELKKSSFFDKVQVKDEDLQAAYQKEIANLSEQRRAAHI 274 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 L N N + +I++ ++ + ++++ G Y + Sbjct: 275 LI--EVNDKLNDEQAKAKIEEIQQRLAKGEDFAALAKEYSQDPGSSNKGGDLGYAGKGVY 332 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 P F+ L +++ + P T G I + + +LK L+ +E+ Sbjct: 333 DPAFEEALYALNKDQVSQPVRTDFGWHLIKLLGVEAPSVPTFASLKGKLTNDLKSQLVEQ 392 Query: 300 HEAEYVKKLRSNAI 313 E K+L +A Sbjct: 393 KFVEVTKQLEDSAF 406 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 28/327 (8%), Positives = 81/327 (24%), Gaps = 33/327 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + I + + + + +NGE I+ ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIIALMAFTGIEAMFTATSNKQNAAEVNGEDISQNELSQAV 60 Query: 61 ALLK-----------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + + L + A++ LI L Q + +F ++ Sbjct: 61 DMQRRQLAQQLSQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGAADAKFSFSDAALD 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE-ME 162 +Q F Q+ Q + +++ + Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRLQF--RQMLGQEMLIGQVRAGVAGSAFVT 178 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + L + V+ + + + + + Sbjct: 179 DAQVEAFARLEKQTRDFASLTLPADTSAVKVTDDEVKAHYDEHAKEFMSPEQVVLDYIEL 238 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGE 281 + + + + + N ++ I + DK + Sbjct: 239 KKSS---------FFDKVQVKDEDLQAAYQK--EIANLSEQRRAAHILIEVNDKLNDEQA 287 Query: 282 IALKAYLSAQNTP-TKIEKHEAEYVKK 307 A + + EY + Sbjct: 288 KAKIEEIQQRLAKGEDFAALAKEYSQD 314 Score = 37.0 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 29/254 (11%), Positives = 69/254 (27%), Gaps = 9/254 (3%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 G+L +L+ + + + DS + Q A++ GL + + F + G Sbjct: 378 KGKLTNDLKSQLVEQKFVEV----TKQLEDSAFESSDLSQPAQDLGLKVQTTAPFGREGG 433 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 G + + + + + + K + L Sbjct: 434 EGLTANRAVIQAAFSPEVLEEGANSNTLELDPETVVVVRSKEHLQPQQLPLESVASSIRA 493 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246 ++ K +A + LR K ++ + + + L F Sbjct: 494 QLVKEHASAAAKAKGEALLAGLRDGKIPLAAKQEGRDWKMMEAVTRSQEGVDPQVLQTLF 553 Query: 247 QNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAE 303 + ++ + + + + KA + ++ A Sbjct: 554 RMPKPTGKDKPEFASITASDGSFVIVRLNGVNQAAAPTDAEKAQYRRFLASREGQQDFAA 613 Query: 304 YVKKLRSNAIIHYY 317 Y +L S A I + Sbjct: 614 YRAQLESKAKIEKF 627 >gi|94987556|ref|YP_595489.1| parvulin-like peptidyl-prolyl isomerase [Lawsonia intracellularis PHE/MN1-00] gi|94731805|emb|CAJ55168.1| Parvulin-like peptidyl-prolyl isomerase [Lawsonia intracellularis PHE/MN1-00] Length = 629 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 21/168 (12%), Positives = 54/168 (32%), Gaps = 5/168 (2%) Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ-GFVQKRIKDAEESRLR 211 + + K K + + + ++ P+N Q++I A + + Sbjct: 242 NQTIDDTTVSEYYQKHKEDFKSPEQIHAQHIVVFAPENSEPEVLKKAQEKINQAANAIKK 301 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + +KF+ + G + P F ++ + + P T G I Sbjct: 302 GEDFSSVAKKFSQDNVAQNGGDLGWFTYEQAVPAFADVAFSLTPGEISQPIQTPVGYHII 361 Query: 271 AICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + DK+ ++ + + + K + ++ + A+I Sbjct: 362 KLIDKKPEEIKSFDEVSKTIQQRLAEDKASIELQDVLENV-QLALIEN 408 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 30/234 (12%), Positives = 70/234 (29%), Gaps = 15/234 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + ++ + + ++I+F I + ++NG+ IT ++ KR Sbjct: 1 MLDFIRSNAQSWGVKIAFGLIIIVFIFWGIGTLSGGPEVE--VVSVNGQSITIQELQKRC 58 Query: 61 ALLKLQKING------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 ++ ++++A Q+LI+ETL QE + G+ + Sbjct: 59 EEIEQNIRQNFPTISAAEINTFRIKQLATQQLILETLVLQEANRIGLIITPIELRKTIES 118 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + + + N + Q ++ + P Sbjct: 119 FPAFHNTEGKFDPAIYLQFLKERNDTPGHFESQIRTNLLIN-KIQQEITAGAYISPTEAY 177 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + I+ +LF D + + K ES + ++ Sbjct: 178 DVYMYESATRTIQYLLFPTEDYLNKVNISADEVAKFYNESSEQFKTPTELNLEY 231 >gi|75764532|ref|ZP_00744003.1| Peptidyl-prolyl cis-trans isomerase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74487981|gb|EAO51726.1| Peptidyl-prolyl cis-trans isomerase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 268 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 38/289 (13%), Positives = 81/289 (28%), Gaps = 44/289 (15%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEI 90 +S + S I TT +G I++ D +K++ K + E++VE + + Sbjct: 5 LSLSACGSSDTIVTTKSGS-ISESDFNKKLK--------ENYGKQNLSEMVVEKVLDDKY 55 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 + + E D Q + Sbjct: 56 KVTDEEVT---------------KQLKELKDKMGDNFNTYMESNGVKNEDQLKEKLKLTF 100 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 F E + V L++ +K K+ +E Sbjct: 101 AFEKAIKATVTEKDFKDHYKPKLQVSHILVK----------------DEKTAKEIKEKLN 144 Query: 211 RLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVE 268 ++++ G+ + +F++ K + P + G Sbjct: 145 SGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKLEVGQLSEPVKSSFGYH 204 Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRSNAIIH 315 I + DK++L K + + +I+ + + + L NA I Sbjct: 205 IIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRDLLKNADIK 253 >gi|311067484|ref|YP_003972407.1| molecular chaperone lipoprotein [Bacillus atrophaeus 1942] gi|310868001|gb|ADP31476.1| molecular chaperone lipoprotein [Bacillus atrophaeus 1942] Length = 284 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 27/298 (9%), Positives = 86/298 (28%), Gaps = 41/298 (13%) Query: 21 VLIIFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79 + I++ + + + + + +T G++ + + + Sbjct: 5 AIAAITATSILALSACSSGDKEVIAKTDAGDVTKGELYTNMK--------KTAGASVLTQ 56 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 L+ E + ++ + + D Y + + L + +L Sbjct: 57 LVQEKVLAKKYKVTDKEIDKKLKEYKTQLGDQYSALKEQYGEDYL--------------K 102 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 Q + + + + ++ + +K + S ++ Sbjct: 103 EQVKYELLTQKAAEDNIKVTDDDVKEYWEGLKGK---------IHTSHILVADKDTAE-- 151 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD---LHPQFQNLLKKSQNN 256 + E+ + K + +++++ + G ++ + D + K + Sbjct: 152 ----EVEKKLKKGEKFEDLAKEYSTDSSANNGGDLGWISKDDTQLDATFSKAAFKLKKGE 207 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 ++P TQ G I ++R ++ + V+K+ A I Sbjct: 208 VSDPVKTQFGYHIIKNTEERGKYDDMKKDLKKDVKEQKLSDTSAVQAAVEKVIKKADI 265 >gi|288941221|ref|YP_003443461.1| nitrogen fixation protein NifM [Allochromatium vinosum DSM 180] gi|288896593|gb|ADC62429.1| nitrogen fixation protein NifM [Allochromatium vinosum DSM 180] Length = 290 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 30/266 (11%), Positives = 74/266 (27%), Gaps = 14/266 (5%) Query: 59 RIALLKLQKINGEL---EKIAVQELIVETL----KKQEIEKSGITFDSNTVNYFFVQHAR 111 R A + Q L ++ V+ L +T +++ T + R Sbjct: 22 RAASERFQAPVDALDAAQRTVVERLAEQTWTLESLVLATDEARDTLIPERHLDEALTEVR 81 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 F + L + G+ + +Q L + I+ V+ E E+ + Sbjct: 82 RRYPDEGAFLADLARNGLDETGLRQALRRELIFDAVMTRVGARAEAVSEEEVRRFHAEHP 141 Query: 172 NITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL--PKDCNKLEKFASKIH 227 R +L +I + +N + +A + + + + Sbjct: 142 ERFQIPERRAARHILITINADYAENGREAARARIEALAADAQARPDAFGQLARRHSECPT 201 Query: 228 DVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIAL 284 + G+ L L L + ++ G + Sbjct: 202 ALEDGRLGTLPRGRLYPELDAALFALDAGQVSGVLESEIGFHLLWCEHIEPGRTIDFEQA 261 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRS 310 + ++ + + + ++ +LR Sbjct: 262 RPHIRERLQSQRRHDCQKAWIARLRR 287 >gi|228908608|ref|ZP_04072446.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 200] gi|228851024|gb|EEM95840.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 200] Length = 303 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 85/305 (27%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 L V+ + +S + S I TT +G I++ D +K++ K Sbjct: 24 LKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGK 74 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E D Sbjct: 75 QNLSEMVVEKVLNDKYKVTDEEIT---------------KQLKELKDKMGDNFNTYMESN 119 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + V L++ Sbjct: 120 GVKNEDQLKEKLKLTFAFEKAIKATVTEKDIKNHYKPKLQVSHILVK------------- 166 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G+ + +F++ K Sbjct: 167 ---DEKTAKEIKEKLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 223 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + DK++L K + + +I+ + + + L Sbjct: 224 EVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRDLLK 283 Query: 311 NAIIH 315 NA I Sbjct: 284 NADIK 288 >gi|229121887|ref|ZP_04251106.1| Foldase protein prsA 1 [Bacillus cereus 95/8201] gi|228661536|gb|EEL17157.1| Foldase protein prsA 1 [Bacillus cereus 95/8201] Length = 288 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 31/312 (9%), Positives = 86/312 (27%), Gaps = 48/312 (15%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKIN 69 + +L L +++ + S + T + IT+ ++SK + Sbjct: 2 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--ITEKELSKELR-------- 51 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + + + ++++ + + S + S+ Sbjct: 52 QKYGESTLYQMVLSKALLDKYKVSDEEAKKQVEEAKV-------KMGDNFKSTLEQVGLK 104 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 ++ K+ + + + +K K + + Sbjct: 105 NEDELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD--------------- 149 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN 248 +K K+ +E ++++ G+ +F+ Sbjct: 150 ---------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEE 200 Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY--- 304 K + P T G I + DK++L +K + +++ ++ Sbjct: 201 AAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQ 260 Query: 305 -VKKLRSNAIIH 315 V +L +A I Sbjct: 261 VVNELLKDADIK 272 >gi|196048054|ref|ZP_03115232.1| foldase protein PrsA [Bacillus cereus 03BB108] gi|196021310|gb|EDX60039.1| foldase protein PrsA [Bacillus cereus 03BB108] Length = 299 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 95/311 (30%), Gaps = 37/311 (11%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + +K L + + + S+ + IT + + + Sbjct: 1 MKIKVKQLLVTGITLTTVSLVGGCSLFDGNSADYAAKTDSGTITKEQLYEHMV------- 53 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 ++ + + ELI + +++ + S D L AE ++F D Sbjct: 54 -DKVGERTLDELITLKVLEKKYKVSNGEIDDEIKR-----------LKAEFGNTFTDFLA 101 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 ++ L + + + E ++ Q+ K +++ Sbjct: 102 QNGVSNEEQLRDVIKLDKLKQKLALDHIKVKEKDLKDLYQQKKPELRVSHIL-------- 153 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQ 247 +++ D + + ++F+ G Y + D+ FQ Sbjct: 154 -------VADEQQANDIKGKIDAGEDFGSLAKEFSLDVATKEKGGDIGYFKDGDMLQPFQ 206 Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK-HEAEYV 305 + +K + P T G I + D++ L +K L ++ KI++ + Sbjct: 207 DAARKLKPGEVSQPVHTDFGYHIIKLIDEKKLPSFEKMKPQLESELITKKIDQSKINAEI 266 Query: 306 KKLRSNAIIHY 316 +KL I Sbjct: 267 QKLLDKEHIKI 277 >gi|196033913|ref|ZP_03101324.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus W] gi|195993593|gb|EDX57550.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus W] Length = 283 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 30/308 (9%), Positives = 84/308 (27%), Gaps = 48/308 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 + L +++ + S + T + IT+ ++SK + + Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--ITEKELSKELR--------QKYG 50 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + + ++++ + + S + S+ ++ Sbjct: 51 ESTLYQMVLSKALLDKYKVSDEEAKKQVEE-------AKDKMGDNFKSTLEQVGLKNEDE 103 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 K+ + + + +K K + + Sbjct: 104 LKEKMKPEIAFEKAIKATVTEKDIKDNYKPEMKVSHILVKD------------------- 144 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 +K K+ +E ++++ G+ +F+ K Sbjct: 145 -----EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEEAAYK 199 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKK 307 + P T G I + DK++L +K + +++ ++ V + Sbjct: 200 LDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQVVNE 259 Query: 308 LRSNAIIH 315 L +A I Sbjct: 260 LLKDADIK 267 >gi|254249300|ref|ZP_04942620.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia cenocepacia PC184] gi|124875801|gb|EAY65791.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia cenocepacia PC184] Length = 410 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 67/302 (22%), Gaps = 42/302 (13%) Query: 21 VLIIFCIVPIVSYKSWAMSS-----RIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 V+ + C + S + + + +N I D+ I Q L Sbjct: 143 VIALVCATGMTSVVAAEAGTATLPKGVVAVVNNMPIAQSDVD-AIVSASGQADTPALRDA 201 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 ++LIV L +Q +K N G E + Sbjct: 202 VKRDLIVRQLVEQAADK------------------ANYGSRPEVQGIVSRARANAAADLY 243 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + +++ + + Sbjct: 244 -----------LRDALGAQRVTDAQVKAHYDYIVANAAQFEYRAEVVAVADPAKANAAAA 292 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 Q D + + E K P Q + Sbjct: 293 ELKQGAAFDTVAKKYNTTANGGVAEWSELKTPLAEG-----RTGGLPMPLAQAMTSLKPG 347 Query: 256 NTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + P ++ + DKR + K L Q + V KL + A Sbjct: 348 AVSGPIRIGNAYAFVKLDDKRPVVVPSFDKAKGVLRQQLEQQARQSAMTALVDKLAAQAT 407 Query: 314 IH 315 I Sbjct: 408 IQ 409 >gi|229184548|ref|ZP_04311751.1| Foldase protein prsA 1 [Bacillus cereus BGSC 6E1] gi|228598959|gb|EEK56576.1| Foldase protein prsA 1 [Bacillus cereus BGSC 6E1] Length = 288 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 31/312 (9%), Positives = 86/312 (27%), Gaps = 48/312 (15%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKIN 69 + +L L +++ + S + T + IT+ ++SK + Sbjct: 2 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--ITEKELSKELK-------- 51 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + + + ++++ + + S + S+ Sbjct: 52 QKYGESTLYQMVLSKALLDKYKVSDEEAKKQVEE-------AKDKMGDNFKSTLEQVGLK 104 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 ++ K+ + + + +K K + + Sbjct: 105 NEDELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD--------------- 149 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN 248 +K K+ +E ++++ G+ +F+ Sbjct: 150 ---------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEE 200 Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY--- 304 K + P T G I + DK++L +K + +++ ++ Sbjct: 201 AAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQ 260 Query: 305 -VKKLRSNAIIH 315 V +L +A I Sbjct: 261 VVNELLKDADIK 272 >gi|90021693|ref|YP_527520.1| tRNA pseudouridine synthase [Saccharophagus degradans 2-40] gi|89951293|gb|ABD81308.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Saccharophagus degradans 2-40] Length = 264 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 19/239 (7%), Positives = 64/239 (26%), Gaps = 4/239 (1%) Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 L+ + + + I + ++ + Sbjct: 27 KSSLVKDEKFEAYLNFKRIPLTDEKRVASALVVYNEREAISKAIEKSDLLDKSLIDVEVA 86 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + + ++ N + + + ++ + + + + Sbjct: 87 EFKKQMLISRYFEAYIKKNVTPEAIKNYYNNNQDEYQNKKIHVAHILFRTNGRMSDEEKN 146 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF-QNLLKKSQ 254 + K+A + K + ++++ + G +L E + P F + + Sbjct: 147 ARLLKAKEAHARLQQNEKFEDLAKEYSDDKLSAQKGGDLGWLDEGSIDPVFSRTVFAMDA 206 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + P+VT G + + + + E+ + + +L+ A Sbjct: 207 GAVSEPFVTSYGYHIVKVIE--AAKTTTKPFDAVKGDIAYKLKEQAKQAEMNRLKEQAK 263 >gi|77360982|ref|YP_340557.1| peptidyl-prolyl cis-trans isomerase D (PPIase D) (rotamase D) [Pseudoalteromonas haloplanktis TAC125] gi|76875893|emb|CAI87114.1| peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D) [Pseudoalteromonas haloplanktis TAC125] Length = 633 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 39/398 (9%), Positives = 100/398 (25%), Gaps = 96/398 (24%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ I + V++ F + I SY +NG I+ + ++ Sbjct: 1 MLEKIREGSQGPIAKVILGAVILSFALAGIGSYLGQTTEQP-VAEVNGIKISQTEFNRAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + ++ + + L+ + L+ Q + G+ +V Sbjct: 60 QNERGRLEQQFGEYFTQIAADPNYMAQIRQGVIDRLVQQELQTQLAAELGLRVSDESVRQ 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------- 148 + + + + + + F++YL +V Sbjct: 120 TILELPYFKIGESFNNDRYLQVIRQMNFQPDSFREYLRKDMTRSQLVSAVAGSDFALKNE 179 Query: 149 --------------------KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS-- 186 K E EI + + + Sbjct: 180 LESAIALQQQTRSIDYLVVNKEAMQDSVVVSEQEIADYYELNSGQFLSPERLSVNYIELK 239 Query: 187 ----------------IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA------- 223 + +KR D K + + Sbjct: 240 AQDITVASVTEDDVKAYYEQSKAQYVEPEKRRVSHILIDNSEDDDAAKAKAESLLAQLNQ 299 Query: 224 -------------SKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVE 268 + G +++ + P F++ +++ + ++ ++ G Sbjct: 300 GADFAELAESSSDDIVSGEMGGDLEWIERDVMDPVFEDAAFALENKGDYSDVIASEFGYH 359 Query: 269 YIAICD--KRDLGGEIALKAYLSAQN-TPTKIEKHEAE 303 I + D + + +KA L A+ K++ + Sbjct: 360 IIKLTDLQAQQVKAYDDVKADLRAELEKAEKVDAFYEK 397 >gi|170736613|ref|YP_001777873.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia MC0-3] gi|169818801|gb|ACA93383.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia MC0-3] Length = 278 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 67/302 (22%), Gaps = 42/302 (13%) Query: 21 VLIIFCIVPIVSYKSWAMSS-----RIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 V+ + C + S + + + +N I D+ I Q L Sbjct: 11 VIALVCATGMTSVVAAEAGTATLPKGVVAVVNNMPIAQSDVD-AIVSASGQADTPALRDA 69 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 ++LIV L +Q +K N G E + Sbjct: 70 VKRDLIVRQLVEQAADK------------------ANYGSRPEVQGIVSRARANAAADLY 111 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + +++ + + Sbjct: 112 -----------LRDALGAQRVTDAQVKAHYDYIVANAAQFEYRAEVVAVADPAKANAAAA 160 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 Q D + + E K P Q + Sbjct: 161 ELKQGAAFDTVAKKYNTTANGGVAEWSELKTPLAEG-----RTGGLPMPLAQAMTSLKPG 215 Query: 256 NTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + P ++ + DKR + K L Q + V KL + A Sbjct: 216 AVSGPIRIGNAYAFVKLDDKRPVVVPSFDKAKGVLRQQLEQQARQSAMTALVDKLAAQAT 275 Query: 314 IH 315 I Sbjct: 276 IQ 277 >gi|228953196|ref|ZP_04115250.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228806423|gb|EEM52988.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 303 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 86/305 (28%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 L V+ + +S + S I TT +G I++ D +K++ K Sbjct: 24 LKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGK 74 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E D Sbjct: 75 QNLSEMVVEKVLNDKYKVTDEEVT---------------KQLKELKDKMGDNFNTYMESN 119 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + V L++ Sbjct: 120 GVKNEDQLKEKLKLTFAFEKAIKATVTEKDIKDHYKPKLQVSHILVK------------- 166 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G+ + +F++ K Sbjct: 167 ---DEKTAKEIKEKLNSGEDFAAVAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 223 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + DK++L K + + +I+ + + ++L Sbjct: 224 EVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRELLK 283 Query: 311 NAIIH 315 NA I Sbjct: 284 NADIK 288 >gi|30262343|ref|NP_844720.1| peptidylprolyl isomerase [Bacillus anthracis str. Ames] gi|47778036|ref|YP_018981.2| peptidylprolyl isomerase [Bacillus anthracis str. 'Ames Ancestor'] gi|30256974|gb|AAP26206.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. Ames] gi|47551741|gb|AAT31456.2| peptidylprolyl isomerase PrsA [Bacillus anthracis str. 'Ames Ancestor'] Length = 298 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 31/312 (9%), Positives = 86/312 (27%), Gaps = 48/312 (15%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKIN 69 + +L L +++ + S + T + IT+ ++SK + Sbjct: 12 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--ITEKELSKELR-------- 61 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + + + ++++ + + S + S+ Sbjct: 62 QKYGESTLYQMVLSKALLDKYKVSDEEAKKQVEE-------AKDKMGDNFKSTLEQVGLK 114 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 ++ K+ + + + +K K + + Sbjct: 115 NEDELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD--------------- 159 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN 248 +K K+ +E ++++ G+ +F+ Sbjct: 160 ---------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEE 210 Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY--- 304 K + P T G I + DK++L +K + +++ ++ Sbjct: 211 AAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQ 270 Query: 305 -VKKLRSNAIIH 315 V +L +A I Sbjct: 271 VVNELLKDADIK 282 >gi|227484925|ref|ZP_03915241.1| possible peptidylprolyl isomerase [Anaerococcus lactolyticus ATCC 51172] gi|227237080|gb|EEI87095.1| possible peptidylprolyl isomerase [Anaerococcus lactolyticus ATCC 51172] Length = 248 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 32/285 (11%), Positives = 86/285 (30%), Gaps = 45/285 (15%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLK--LQKINGELEKIAVQELIVETLKKQEIEKSGI 95 ++++ +NG+ I D+ + ++ + N E K+ E++ + + + K+ + Sbjct: 3 NNNKLLAEVNGKKIYRNDVISFMHNIEGGARFQNEEGIKVLADEMVNQEIILADAYKNKL 62 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + N L ++ + + Sbjct: 63 DDEDEFKNEL-------------------------------KLVKDNMLKNYAMHKIFEA 91 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + ++ + K + + D N+ + + ++ Sbjct: 92 VNPTDDDLKKYYEDNKELISPNKTYTASHILVDDIDKANKIYEEIKL---------GLDF 142 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICD 274 +K++ S G + + +FQ+ L + P +Q G I + D Sbjct: 143 KEAAKKYSKDPSAASGGSLGTFPKGVMVKEFQDGLDSLEIGEISKPVKSQFGYHIIKLED 202 Query: 275 K--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + +K + K ++ E +K++ NA + Y Sbjct: 203 IQNEEPKAFDEVKEQVYQTYLMVKRQEKYLEKLKEISKNAEVKKY 247 >gi|70731342|ref|YP_261083.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas fluorescens Pf-5] gi|68345641|gb|AAY93247.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas fluorescens Pf-5] Length = 623 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 30/268 (11%), Positives = 84/268 (31%), Gaps = 10/268 (3%) Query: 54 GDISKRIALLKLQKINGELEKIAVQE----LIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 + +++ +LQ +++ + + L + + T ++ + Sbjct: 137 DQVIRQLGYTRLQFRQMLTQEMLIGQVRAGLAGSGFVTDAQVLAFARLEKQTRDFASLTI 196 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + F + + ++ K F + + ++ A QK Sbjct: 197 KADPAAVKLTDDEVKAYYDQHAKEFMTPDQVVIDYIELKKAAFFDQVSVKDEDLQALYQK 256 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HD 228 + +L N N+ + +I++ + + ++F+ Sbjct: 257 EIANLSEQRRAAHILI--EVNDKVNEAQAKAKIEEIQARLAKGESFEALAKEFSQDPGSA 314 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALK 285 + G + P F+ L +++ + P T G I + ++ +LK Sbjct: 315 SNGGDLGFAGPGVYDPTFEKALYALNKDQVSAPVRTGFGFHLIKLLGVEAPEVPSFASLK 374 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 L+ ++E+ E K+L ++ Sbjct: 375 GKLTRDLKTQQVEQRFVEATKQLEDSSF 402 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 31/321 (9%), Positives = 82/321 (25%), Gaps = 26/321 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + + + ++ +NGE IT ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIVALLALTGFDAIFKATTHNQDAAKVNGEEITQNELSQAV 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + + Q + L + A++ LI L Q + S F ++ + Sbjct: 61 DMQRRQLMQQLGKDFDASLLDEKMLREAALKGLIDRKLLLQGAQDSKFAFSEGALDQVIL 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 Q F ++ G+ + Sbjct: 121 QTPEFQVDGKFSPERFDQVIRQLGYTR-LQFRQMLTQEMLIGQVRAGLAGSGFVTDAQVL 179 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + + + P V+ + + + + Sbjct: 180 AFARLEKQTRDFASLTIKADPAAVKLTDDEVKAYYDQHAKEFMTPDQVVIDYIELKKAAF 239 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGEIALKA 286 + + ++L Q N ++ I + DK + A Sbjct: 240 F-----------DQVSVKDEDLQALYQKEIANLSEQRRAAHILIEVNDKVNEAQAKAKIE 288 Query: 287 YLSAQNTPTKIEKHEAEYVKK 307 + A+ + + A+ + Sbjct: 289 EIQARLAKGESFEALAKEFSQ 309 >gi|320334162|ref|YP_004170873.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus maricopensis DSM 21211] gi|319755451|gb|ADV67208.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus maricopensis DSM 21211] Length = 331 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 35/293 (11%), Positives = 78/293 (26%), Gaps = 27/293 (9%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGE--------------LEKIAVQELIVETL 85 + I + +T D Q +N + ++++ + Sbjct: 40 QTVVARIGTQTLTLADFESAYRQAVAQVVNAQGVPLSADVLPYFVQYRPEILEQVARQRA 99 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 Q SG+ D+ V+ + A+ + + + +Q +A ++ Sbjct: 100 VLQLAANSGLKVDTAKVDQSIEDLRKEYPADADYTDALEGSGYVSEAALRQSIADAQLYR 159 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + K+ + + K R + D+ + Sbjct: 160 AYLDT-IRGKFKFSDSVVNGYYLSHKADFTRPAEACAKHILLKDDATARTVAAR------ 212 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQ 264 + + + G L D P+F + K NT TQ Sbjct: 213 ---LSKGEDFAKVAAEVSEDPGSKGQGGDLGCLAPGDTVPEFDAAVFKGPLNTVQTVKTQ 269 Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + + + D G A A + Q T + +Y+ + + Sbjct: 270 FGTHLVVVTKRTDAGL--APLAEAADQIRDTLANEAAQKYINAQLVKVKVEVF 320 >gi|312860326|gb|ADR10202.1| PpiC-type peptidyl-prolyl cis-trans isomerase [bacterium enrichment culture clone F5-11] Length = 290 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 24/283 (8%), Positives = 73/283 (25%), Gaps = 38/283 (13%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 + T+NG I G + + + +K + + ++ Sbjct: 39 SGNEPVATVNGRPIPRGVFEVMLGVTRQEKASEA----------------EATGQTAQPE 82 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + + + ++ + H I + + K Sbjct: 83 LTEADHQAILDRLITLEAVVQEAAKQGFGTDDAFLHELALQRDTLIAQRFL-AEASKKIE 141 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + I ++ + Q + + Sbjct: 142 IDDAAIAEYYAQLPKHFE-------------YDLRQIVTADEASARAVIAKLKDGADFAQ 188 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTN-PYVTQKGVEYIAICDK 275 + + + G +L+ L + ++ T+ P T +G + + Sbjct: 189 LASEMSQAPEAANGGSLGWLMAEQLPTTIADAVRAMQAGTFTDQPLQTPQGWHVVRVEGV 248 Query: 276 R--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 R + +A++ + KI++ + ++R++A + Sbjct: 249 RQLEQVPLETARAWIEGELRNQKIQQ----MIDQMRASAKVEI 287 >gi|113867510|ref|YP_725999.1| peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha H16] gi|113526286|emb|CAJ92631.1| Peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha H16] Length = 644 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 30/281 (10%), Positives = 61/281 (21%), Gaps = 31/281 (11%) Query: 52 TDGDISKRIALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 T R+ + G + K + LI ++++++ Sbjct: 150 TPEQFDARMRFELATQQLGASVAATAFVPKSLLDRLIAVRDQQRDVQALLF--KPAGYTA 207 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 A + + V E+ Sbjct: 208 KVQPDAAALKAYYDSHQQAFSVPEQAKVEYLLLSGEALAATQAV----------TPEELK 257 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + + R I K Q A + L K + A Sbjct: 258 SYYDSNIARFRIDEQRRASHILISAPKDAPAAQRQAAKDKATKLLEDLRKHPDTFADVAR 317 Query: 225 KIH-----DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 K G ++ L F++ + ++ T G I + + Sbjct: 318 KNSQDPGSAEKGGDLGFMGRGALVKPFEDAMYALKDGQVSDVVETDYGYHIIKLTGIKPA 377 Query: 279 GGE------IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + L+A L Q K + + + A Sbjct: 378 ETKPLEAVRTELEAELRKQFADKKFAEQADAFGNTVYEQAD 418 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 17/145 (11%), Positives = 43/145 (29%), Gaps = 21/145 (14%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA-------------LLKLQKING 70 F + SY + SS ++G I+ +I + Q Sbjct: 23 SFVFFGVESYSRFMDSSHDAAKVDGRAISVQEIDNVVRDQSERARQVLGASYDPRQFEGP 82 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--------QHARNTGLSAEDFSS 122 + K + +LI++ + + + +T + ++ + + + Sbjct: 83 DARKAVLDQLILQRVMASAVAREHLTVSDAKLLEEISNLPAIAQLPRTKDGKVDDKAYLQ 142 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDV 147 L QG+ F + + + Sbjct: 143 LLQSQGMTPEQFDARMRFELATQQL 167 >gi|308270798|emb|CBX27408.1| hypothetical protein N47_H22300 [uncultured Desulfobacterium sp.] Length = 632 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 26/256 (10%), Positives = 71/256 (27%), Gaps = 16/256 (6%) Query: 69 NGELEKIAVQELIVETLK----------KQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 E E + LI+E L E + ++ + Sbjct: 145 PDEFEATVRESLIMERLISFITSSVKVSDNEALEWFNWKGASVNVDYVFFTPDKYNGINP 204 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + ++ ++ + + F+ + + E+ + + Sbjct: 205 SQKELNEYFDKNKESYRTEKKVKVAYLLFSPDSFITQVKVDDNEVKEYYENNIDKFTNPE 264 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAE---ESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 + ++ N VQ + A+ + +K++ G Sbjct: 265 TVEASHILCKIDEGANPAAVQAAKQKADNVFKMIKEGQPFEELAKKYSDCPSKADGGHLG 324 Query: 236 YLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC--DKRDLGGEIALKAYLSAQN 292 + D+ F + Q + P +T+ G I + +K + ++ + + Sbjct: 325 AFGKKDMVEPFASKAFSMKQGEISEPVLTKFGWHIIKVEKVNKEKMLVLKEAESEIRKKL 384 Query: 293 TPTKIEKHEAEYVKKL 308 K +K + +K+ Sbjct: 385 ISEKAKKLAYDEAEKI 400 Score = 49.7 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 82/291 (28%), Gaps = 11/291 (3%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 S K +S + T +I ++K +L L++ E+ K +LI E KK Sbjct: 339 AFSMKQGEISEPVLTKFGWHIIKVEKVNKE-KMLVLKEAESEIRK----KLISEKAKKLA 393 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 +++ D ++ + +G+ + F K +++ ++ Sbjct: 394 YDEAEKICDLAINMNDLIKASEKSGVKIKTTDFFSKKDASAAAGADNQALMEAGVFEMSD 453 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + A + + K +K + + Sbjct: 454 KEISDVKEIGNRYCVAEVTDIMLPKIPVLKDVAETVKSDVIKEMQWEKAKKDAEVLLSAL 513 Query: 210 LRLPKDCNKLEKFASKIHDV----SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 + K+ H+ G + + L P + Sbjct: 514 KTGKDFTQESLKYGLTPHETGFFARSGPVGSIGYEPQLSEAAFKLSDDNKYAETPVKGKN 573 Query: 266 GVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 G + ++ K + K E + +++K++S++ I Sbjct: 574 GYYIMRFKERENPPEQDFDKEKERIVKALLEQKKENTFSSWLEKIKSSSEI 624 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 26/239 (10%), Positives = 70/239 (29%), Gaps = 18/239 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ + +I+ V + + +NGEVIT + + Sbjct: 1 MLDFMRKNAGSWM--IKAILGIIVVVFVFWGVGSFRSNRANRVAKVNGEVITVREYQEAY 58 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 L Q +K A+ +LIV+ L QE +K + + Sbjct: 59 NNLVEQIRAKLGTNYNEETLKAFNFKKKALDDLIVKKLLVQEAKKLKFRVTDDELVKLIG 118 Query: 108 QHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + +++ L + + F+ + I ++ + + Sbjct: 119 SIKAFQVDGVFNKKEYERVLSRNHTVPDEFEATVRESLIMERLISFITSSVKVSDNEALE 178 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 K ++ V ++ + + + K++ + ++ + Sbjct: 179 WFNWKGASVNVDYVFFTPDKYNGINPSQKELNEYFDKNKESYRTEKKVKVAYLLFSPDS 237 >gi|46579478|ref|YP_010286.1| peptidyl-prolyl cis-trans isomerse domain-containing protein [Desulfovibrio vulgaris str. Hildenborough] gi|120602972|ref|YP_967372.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio vulgaris DP4] gi|46448892|gb|AAS95545.1| peptidyl-prolyl cis-trans isomerse domain protein [Desulfovibrio vulgaris str. Hildenborough] gi|120563201|gb|ABM28945.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio vulgaris DP4] gi|311233293|gb|ADP86147.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio vulgaris RCH1] Length = 629 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 15/142 (10%), Positives = 41/142 (28%), Gaps = 4/142 (2%) Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R +L +P+ + ++RI DA K + Sbjct: 260 SYFMQPERVRARHILVRVPEGADEATVRKAEERIADAAAQIKAGKDFAAVAAKVSEDGSA 319 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC--DKRDLGGEIALK 285 + G+ + ++ F++ + P +Q G I + + ++ Sbjct: 320 RNGGELGWFGRGEMVKPFEDAAFGLKPGEVSAPVRSQFGFHLIKSEGHEAQRQKALDEVR 379 Query: 286 AYLSAQNTPTKIEKHEAEYVKK 307 + + K + + + Sbjct: 380 NEIRKRLAEEKAIEKVHDSLDN 401 Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 57/194 (29%), Gaps = 19/194 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + ++++F + S + + T+N + I D + Sbjct: 1 MLDVIRGHAQSWGVKVAFGLIIVVFVFWGVGSM--QEGPTSVVATVNKKPIVIRDFIREY 58 Query: 61 ALLKLQ------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 L++ +Q+++ ETL +QE E+ GIT + Q Sbjct: 59 ERQVESLRTRFPGVTADELKKLGLKRQVLQQMVAETLMQQEAERLGITVTPYELRAAIDQ 118 Query: 109 HARNT----GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 E + L Q F++ + + ++ + E Sbjct: 119 IPAFRDASGKFDPETYKKVLKAQQTVPGRFEEGVRKDMLGRK-MRALVTAGAVVTDAEAR 177 Query: 165 ANKQKMKNITVREY 178 + +Y Sbjct: 178 DMFTYAQEKRSIDY 191 >gi|229190961|ref|ZP_04317951.1| Foldase protein prsA 1 [Bacillus cereus ATCC 10876] gi|228592359|gb|EEK50188.1| Foldase protein prsA 1 [Bacillus cereus ATCC 10876] Length = 303 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 85/305 (27%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 L V+ + +S + S I TT +G I++ D +K+ K Sbjct: 24 LKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKFK--------ENYGK 74 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E D Sbjct: 75 QNLSEMVVEKVLNDKYKVTDEEVT---------------KQLKELKDKMGDNFNTYMESN 119 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + V L++ Sbjct: 120 GVKNEDQLKEKLKLTFAFEKAIKATVTEKDIKDHYKPKLQVSHILVK------------- 166 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G+ + +F++ K Sbjct: 167 ---DEKTAKEIKEKLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 223 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + DK++L K + + +I+ + + ++L Sbjct: 224 EVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRELLK 283 Query: 311 NAIIH 315 NA I Sbjct: 284 NADIK 288 >gi|299537572|ref|ZP_07050865.1| foldase protein prsA 1 precursor [Lysinibacillus fusiformis ZC1] gi|298726941|gb|EFI67523.1| foldase protein prsA 1 precursor [Lysinibacillus fusiformis ZC1] Length = 326 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 84/312 (26%), Gaps = 49/312 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 + T L + V + S S I T + I+ D +++ L Sbjct: 1 MKKTVLSLTLAASVLALGACSGGDSKAIVTSKVGD--ISVADFNEKAKALTGSY------ 52 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +Q+++ E + + E + T AE + Sbjct: 53 --VMQQMVTEKVLADKYEVTDKEIKEAYDTTASQFGDGFTQALAESGLTEQGF------- 103 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 S+ +++ + E ++ N Sbjct: 104 ------KDSLRVQLLQEKALKDQAIKEEDVKKYY---------------EQMKTELNGRH 142 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 +K K+ E K + +++++ G+ + + +F + Sbjct: 143 ILVADEKTAKEVIEKIKGGAKFEDVAKEYSTDTGSAQKGGELGWFSVGSMVDEFNDAAYA 202 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLG---GEIALKAYLSAQNTPTK-----IEKHEAE 303 N + P + G I I DKRD+ + + + + + Sbjct: 203 LELNTLSEPVKSSFGYHVIEITDKRDVKGVGSFKDEEENIRSTMLNKLNQTGEAQTILKD 262 Query: 304 YVKKLRSNAIIH 315 V K+ +A + Sbjct: 263 IVAKMAKDADVK 274 >gi|228914927|ref|ZP_04078532.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228927396|ref|ZP_04090453.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228933628|ref|ZP_04096478.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826088|gb|EEM71871.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228832292|gb|EEM77872.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228844723|gb|EEM89769.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 288 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 31/312 (9%), Positives = 86/312 (27%), Gaps = 48/312 (15%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKIN 69 + +L L +++ + S + T + IT+ ++SK + Sbjct: 2 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--ITEKELSKELR-------- 51 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + + + ++++ + + S + S+ Sbjct: 52 QKYGESTLYQMVLSKALLDKYKVSDEEAKKQVEE-------AKDKMGDNFKSTLEQVGLK 104 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 ++ K+ + + + +K K + + Sbjct: 105 NEDELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD--------------- 149 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN 248 +K K+ +E ++++ G+ +F+ Sbjct: 150 ---------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEE 200 Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY--- 304 K + P T G I + DK++L +K + +++ ++ Sbjct: 201 AAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQ 260 Query: 305 -VKKLRSNAIIH 315 V +L +A I Sbjct: 261 VVNELLKDADIK 272 >gi|301060821|ref|ZP_07201635.1| PPIC-type PPIASE domain protein [delta proteobacterium NaphS2] gi|300445070|gb|EFK09021.1| PPIC-type PPIASE domain protein [delta proteobacterium NaphS2] Length = 635 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 29/236 (12%), Positives = 74/236 (31%), Gaps = 6/236 (2%) Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 K + + T ++ + F ++ ED + + Sbjct: 163 KQFLFAFLNITDQEILEYYTFANEKVKIGFVEFKPEDFKKSVTIEDKAKLKEYFEKNKES 222 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 ++ I + ++ DF + E EI + + + + ++ NK Sbjct: 223 YRVPEKIAVRYLEIDPKDFEGEVEVTEKEIQSYYEYNSDRYSQPKQVKARHILFKFNKDD 282 Query: 194 NQG---FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250 ++ V+K+ + E + + +K++ G Y ++ F+ Sbjct: 283 SEEVKNTVKKKAEKVLEKARKGEDFASLAKKYSEGPTKSKGGDLGYFKTGEMEKPFEEAA 342 Query: 251 KK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAE 303 + ++ T+ G I + D ++ G + +K + A T + E Sbjct: 343 FALKKGEISDLVQTRFGYHIILVEDIKEAGIKPLENVKGEIRATLTGNLTAELAHE 398 Score = 45.4 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 27/298 (9%), Positives = 75/298 (25%), Gaps = 25/298 (8%) Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-------------EL 72 V Y + + +NGE+I + K + + L Sbjct: 25 VFVFYFGYSFTSDKAMKVAYVNGELINGPEYEKAYRDMLMSFQARYKDMWNDNLLKIFNL 84 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD---KQGI 129 ++ A+ LI + L Q + G+ + + + D + + Sbjct: 85 KQRALDSLITQRLMSQAATELGLAVTEEEIQKAIMTYPAFQINGQFDMRRYQALLSANHM 144 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 F+ + + + + + F + + + + + + Sbjct: 145 KPEDFEASITSELLDQKLKQFLFAFLNITDQEILEYYTFANEKVKIGFVEFKPE----DF 200 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 K K + E+++ ++ G+ + Q+ Sbjct: 201 KKSVTIEDKAKLKEYFEKNKESYRVPEKIAVRYLEIDPKDFEGEV-----EVTEKEIQSY 255 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + + + P + + +K + + A KK Sbjct: 256 YEYNSDRYSQPKQVKARHILFKFNKDDSEEVKNTVKKKAEKVLEKARKGEDFASLAKK 313 >gi|315586175|gb|ADU40556.1| peptidyl-prolyl cis-trans isomerase [Helicobacter pylori 35A] Length = 299 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 82/281 (29%), Gaps = 29/281 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 S+ + T++G +IT D I +L++ + LI + ++ +E T Sbjct: 40 SSAGVLATVDGRLITKSDFD-MIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKT- 97 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + E + + F + + + K Sbjct: 98 -------------EKLDQTPEFKAMMEAVKKQALVEFWAKK----------QAEEVKKIQ 134 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E+ K+ + + + + + + + + N Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK 275 + + + + G ++ + P F + + + T P T+ G I + K Sbjct: 195 RDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISK 254 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + ++ + +++LR +A I Sbjct: 255 DSPVTYTYDQAKPTIKGMLQEKLFQERMNQKIEELRKHAKI 295 >gi|303234820|ref|ZP_07321445.1| PPIC-type PPIASE domain protein [Finegoldia magna BVS033A4] gi|302493938|gb|EFL53719.1| PPIC-type PPIASE domain protein [Finegoldia magna BVS033A4] Length = 321 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 37/323 (11%), Positives = 87/323 (26%), Gaps = 24/323 (7%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------- 69 F+ I+ ++ ++ + I E I D+ K + K Sbjct: 1 MKKFLAIVLAMMMVMVTACSNKPNGAVAKIGKEYIYQKDVDKVMEDYKQYYGQDIFNPNT 60 Query: 70 -------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 +++ + LI E + + ++ I V + + G + + Sbjct: 61 EQGKEALKQIKPKIIDMLINEKIANKLMKDKKIEVSDKEVQAEVDKLQKQLGGADKFKEQ 120 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + +Q + + F + + EI K + + Sbjct: 121 LKKENMTEQALKEQIEKQ--LKNKKLSQQFEKDFKPSDKEIKDEFDKNIDTYTQYNADHI 178 Query: 183 VLFSIPDNKLQNQGFVQKRIKD----AEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYL 237 + K + E + + + GK Sbjct: 179 LFSGKDAKGKNLDASKLKAKSELADKTYEEVKDGKNFNEVAKAKSEDPSAKQNSGKLGDF 238 Query: 238 LESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTP 294 L S + +F + K + P T+ G I + K + A K + + Sbjct: 239 LSSTMVKEFSDALKKMKPGEVSKPVKTEFGYHIIKLNSKVTELDKMTDANKQNIKTAISN 298 Query: 295 TKIEKHEAEYVKKLRSNAIIHYY 317 I++ + +K + + + Y Sbjct: 299 KIIQEKVQKEFEKQKKDLGVKIY 321 >gi|297374635|emb|CBL42922.1| PpiC-type peptidyl-prolyl cistrans isomerase [Candidatus Magnetobacterium bavaricum] Length = 323 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 74/278 (26%), Gaps = 38/278 (13%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 + E IT + + +A L K ++ L+ E Sbjct: 36 IVKLGQETITSEQLQEELAKLPPNIKAMFTGKDGLKRLVDEV------------------ 77 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + L E LDK ++ I I + KN E Sbjct: 78 -------KKREVLYLEAKKVGLDKDPEFTKKITEFKKINLINTLIQKNVQAKNVTVTPEE 130 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + V +R V ++ KD + + + Sbjct: 131 AKKYYDENQKEFVMPEQVRAVHIL---------VKTEQEAKDLYDKLKKGGDFAATAKSV 181 Query: 223 A-SKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG- 279 + G + + P F + + K + + P T G I + D ++ Sbjct: 182 SMDTATAEKGGDLDFFSRGQMEPSFDEAVFKLKKGELSTPVKTSFGYHIIKVVDNKEAKT 241 Query: 280 -GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++K + T K +K Y + N ++ Sbjct: 242 TDFESVKPMIIQYLTGEKQKKTFDTYYSSVEKNYNVNI 279 >gi|90424481|ref|YP_532851.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisB18] gi|90106495|gb|ABD88532.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisB18] Length = 346 Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 31/286 (10%), Positives = 74/286 (25%), Gaps = 32/286 (11%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 S A I I IT ++ I+ L ++ Sbjct: 61 SSVAKGGEIVARIGENDITAEEVRAAISFLDARQQAALAR-------------------- 100 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 D ++ N E + D+Q + + Q + + Sbjct: 101 ----DPAQLSQTVRAILANRLALKEALAKKWDQQPVIVAQLARVRESQIVESYLQSLTTP 156 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E EI A + + + + K ++ K ++ + Sbjct: 157 PESYPNESEIKAVYDANASALMVPRRFQLAQIVVAVAKDADKAAEDAGRKKLDDVLKKAK 216 Query: 214 KDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 A + G+ + E DL + ++ + ++ + P G Sbjct: 217 APGADFAALARSVSDDAATAERDGEIGWAAEPDLKTEIRSQIVGLAKGAISEPVRLDDGW 276 Query: 268 EYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + D ++ L + + + + Y+ +L Sbjct: 277 HILKLLDTEASRLRSLSEVRDALVQRIRAERADANRRAYMAELLKQ 322 >gi|51244848|ref|YP_064732.1| peptidyl-prolyl cis-trans isomerase D [Desulfotalea psychrophila LSv54] gi|50875885|emb|CAG35725.1| related to peptidyl-prolyl cis-trans isomerase D [Desulfotalea psychrophila LSv54] Length = 634 Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 28/267 (10%), Positives = 62/267 (23%), Gaps = 14/267 (5%) Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 L K + + E + + S + S + Sbjct: 143 AANRLSPSKFEANIRHDMLAEKTARAINEFSAHASDFEIEEFYGQANEGVSVDFASFSPK 202 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQ--------SIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 DFSS + + + + + K E I Q Sbjct: 203 DFSSQVSVEEPALAQWFKEAKDNYKKSPEVKLTYLAYDYATIQEKISLDEAAINNYYQSH 262 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL---PKDCNKLEKFASKIH 227 N + + Q ++K AE + +F+ Sbjct: 263 LNTFRLAEKRHARHILFVVSPGDSDEKQQAQLKKAENVLKKAQADEDFAQLARQFSEGPS 322 Query: 228 DVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286 G + +++ P + + + T G I + ++ + Sbjct: 323 KSEGGDLGFFARAEMIPPFADAVFTLKNGDISGIVKTNFGYHIIKLEGIQEAKTKS--LD 380 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + Q + + +L +NA Sbjct: 381 KVREQIALSLQQDQAKALAFQLANNAY 407 Score = 40.8 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 18/157 (11%), Positives = 45/157 (28%), Gaps = 18/157 (11%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-------------ELE 73 + + + I +NGE I+ + Q + L+ Sbjct: 31 FWGVGANMMNKSEAAIV--VNGEEISLQQFQQAYDQAFQQLSDQFGGKVPKGMADALGLK 88 Query: 74 KIAVQELIVETLKKQEIEKSGIT---FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 V L+ + L +Q ++ G+ + Q ++ + ++S L + Sbjct: 89 DQVVNRLVQQELLRQGGKQMGVQLSAVEIQHAIQAMPQFHKDGAFDVKSYNSILAANRLS 148 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + F+ + + + + EI Sbjct: 149 PSKFEANIRHDMLAEKTARAINEFSAHASDFEIEEFY 185 >gi|169824179|ref|YP_001691790.1| putative peptidyl-prolyl cis-trans isomerase [Finegoldia magna ATCC 29328] gi|302380852|ref|ZP_07269315.1| PPIC-type PPIASE domain protein [Finegoldia magna ACS-171-V-Col3] gi|167830984|dbj|BAG07900.1| putative peptidyl-prolyl cis-trans isomerase [Finegoldia magna ATCC 29328] gi|302311347|gb|EFK93365.1| PPIC-type PPIASE domain protein [Finegoldia magna ACS-171-V-Col3] Length = 321 Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 38/323 (11%), Positives = 90/323 (27%), Gaps = 24/323 (7%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------- 69 F+ I+ ++ ++ + I E I D+ K + K Sbjct: 1 MKKFLAIVLAMMMVMVTACSNKPNGAVAKIGKEYIYQKDVDKVMEDYKQYYGQDIFNPNT 60 Query: 70 -------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 +++ + LI E + + ++ I V + + G + + Sbjct: 61 EQGKEALKQIKPKIIDMLINEKIANKLMKDKKIEVSDKEVQAEVDKLQKQLGGADKFKEQ 120 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + +Q + + F + + EI K + + Sbjct: 121 LKKENMTEQALKEQIEKQ--LKNKKLSQQFEKDFKPSDKEIKDEFDKNIDTYTQYNADHI 178 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYL 237 + K + + K+ + A + + GK Sbjct: 179 LFSGKDAKGKNLDASKLKAKSELADKTYEEVKNGKNFNEVAKAKSEDPSAKQNSGKLGDF 238 Query: 238 LESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTP 294 L S + +F + K + P T+ G I + K + A K + + Sbjct: 239 LSSTMVKEFSDALKKMKPGEVSKPVKTEFGYHIIKLNSKVTELDKMTDANKQNIKTAISN 298 Query: 295 TKIEKHEAEYVKKLRSNAIIHYY 317 I++ + +K + + + Y Sbjct: 299 KIIQEKVQKEFEKQKKDLGVKIY 321 >gi|213962588|ref|ZP_03390850.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga sputigena Capno] gi|213954914|gb|EEB66234.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga sputigena Capno] Length = 451 Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 87/309 (28%), Gaps = 15/309 (4%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--INGEL 72 + + V+++F + + +I + DI K L+ Q+ Sbjct: 5 KIWSILVMLLFTTPFFAQNNERKKVDGVAAVVGDYLILESDIDKAYIDLQQQEVDTREIN 64 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH-----ARNTGLSAEDFSSFLDKQ 127 + +L+ + L + + + + V Q A+ G + + Sbjct: 65 RCQMLGKLMEDKLYAHQAVQDSVKLTDSEVRDQVNQRIEFLTAQLGGDIKKLLQFYKKDD 124 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 L S+ +K + EI + + + I Sbjct: 125 EQSMRDELFNLLKVSMLAQRMKQQIIKDVEVTPEEIRTFFNAIPADERPHFGTELEIAQI 184 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH---DVSIGKAQYLLESDLHP 244 N + + VQK I + + + ++ A + S Sbjct: 185 VVNPVAPKSSVQKVIDQLNDIKKDVEENGMSFSTKAILYSQDRATGGQVLTFNRNSAFDK 244 Query: 245 QFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEA 302 F+++ + + P+ + G I + R G+ ++ P + Sbjct: 245 AFKDVAFTLQEGEISKPFESSFGWHIIQMDKIR---GKEVSVRHILLMPDIPEEALNEAK 301 Query: 303 EYVKKLRSN 311 E + K+R Sbjct: 302 EKISKIRER 310 >gi|206973718|ref|ZP_03234636.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus H3081.97] gi|217959835|ref|YP_002338389.1| peptidylprolyl isomerase [Bacillus cereus AH187] gi|206747874|gb|EDZ59263.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus H3081.97] gi|217064695|gb|ACJ78945.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus AH187] Length = 283 Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 89/309 (28%), Gaps = 50/309 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 + L +++ + S + T + +T+ ++SK L+ + L Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQKYGESTLY 55 Query: 74 KIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + + L+ + E K + + + F GL ED Sbjct: 56 QMVLSKALLDKYKVSDEEAKKQVEEAKDKMGDNFKSTLEQLGLKNED------------- 102 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K+ + + + +K K + + Sbjct: 103 ELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD------------------ 144 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ +E ++++ G+ +F+ Sbjct: 145 ------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEIAGFAPGQTVKEFEEAAY 198 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306 K + P T G I + DK++L +K + +++ ++ V Sbjct: 199 KLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQVVN 258 Query: 307 KLRSNAIIH 315 +L +A I Sbjct: 259 ELLKDADIK 267 >gi|153872856|ref|ZP_02001627.1| peptidyl-prolyl cis-trans isomerase D [Beggiatoa sp. PS] gi|152070679|gb|EDN68374.1| peptidyl-prolyl cis-trans isomerase D [Beggiatoa sp. PS] Length = 576 Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 79/269 (29%), Gaps = 14/269 (5%) Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 T + R +LL Q G L V + E +++ +++Y + R Sbjct: 69 TAFEWEIRRSLLTDQIREGVLRSALVTD-------YDEQQRTRFDEQQRSISYLIIPKTR 121 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 + +K ++ + ++ K+D E + Q+ K Sbjct: 122 FDKAVTITDADIEKYYQEHLERYKTVEKVRIEYVELSKSDLANAEPLSEEMLKERYQERK 181 Query: 172 NITVREYLIRTVLFSIPDNKLQ---NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-H 227 I K ++ +++++D ++F+ I Sbjct: 182 ASFTTPGRWNARHILIEVGKEASVSDKEEAKQKVQDILAKIKAGESVEKLAKQFSDDIGS 241 Query: 228 DVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIAL 284 G + + F+ + + P T+ G I + D + + Sbjct: 242 KNQGGDLGWFDSGTMVKPFEEALKSMKVGDISEPIKTRFGFHIIELVDVQPEKVLPFEQV 301 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + L A + + V+++ + A Sbjct: 302 REQLEADLKNEQADSAFYGQVEQMANLAF 330 >gi|288941065|ref|YP_003443305.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Allochromatium vinosum DSM 180] gi|288896437|gb|ADC62273.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Allochromatium vinosum DSM 180] Length = 282 Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 74/277 (26%), Gaps = 50/277 (18%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 T+NG D+ + + +LQ + Q+L E + + G Sbjct: 34 IATVNGTP-YRLDVFRVFFMERLQGRPASNDPAVQQQLFDEFMNLIVASQEGDRRKLEGE 92 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + + I + + A I + ++ ++ L+ E Sbjct: 93 RNVVAALELERMKVMSNAALSAMADEIEPSEKELKDAYDRIKEQATRTEYKARHILLKSE 152 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 A + + K +K Sbjct: 153 DEAK-------------------------------------KLIKQLDKGAKFEELAKKH 175 Query: 223 ASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAICDKR--DL 278 + G + + + F + + K + T P TQ G I + + R + Sbjct: 176 SEGPTGKDGGDLGWFDPAQMVAPFAEAVTKLEPGSYTKEPVQTQFGWHIIELQETRKAEP 235 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K L+A K + ++R+NA++ Sbjct: 236 PAFEDAKPQLTALVRRQK--------LAEMRNNAMVE 264 >gi|228919876|ref|ZP_04083232.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839777|gb|EEM85062.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 286 Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 86/304 (28%), Gaps = 45/304 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + ++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYDQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKDVDKKFD--------EMKKQYGDQFDTLLKQQGIKEETIK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q ++ K + + Sbjct: 104 TGVRAQLAQEKAIEKTITDKELKENYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G Y + +F++ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGYFTAGKMVKEFEDAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSN 311 ++ + P +Q G I + D ++ +K + K + + + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTDIKEQKPFDEVKGDIKKDLVQKKAQDAAFMNDLMMKEIKK 259 Query: 312 AIIH 315 A + Sbjct: 260 ADVK 263 >gi|30019198|ref|NP_830829.1| peptidylprolyl isomerase [Bacillus cereus ATCC 14579] gi|218233989|ref|YP_002365810.1| peptidylprolyl isomerase [Bacillus cereus B4264] gi|229042892|ref|ZP_04190626.1| Foldase protein prsA 1 [Bacillus cereus AH676] gi|229126454|ref|ZP_04255469.1| Foldase protein prsA 1 [Bacillus cereus BDRD-Cer4] gi|229143755|ref|ZP_04272176.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST24] gi|229149355|ref|ZP_04277591.1| Foldase protein prsA 1 [Bacillus cereus m1550] gi|296501758|ref|YP_003663458.1| peptidylprolyl isomerase [Bacillus thuringiensis BMB171] gi|46396827|sp|Q81GY5|PRSA1_BACCR RecName: Full=Foldase protein prsA 1; Flags: Precursor gi|29894741|gb|AAP08030.1| Protein export protein prsA precursor [Bacillus cereus ATCC 14579] gi|218161946|gb|ACK61938.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus B4264] gi|228633997|gb|EEK90590.1| Foldase protein prsA 1 [Bacillus cereus m1550] gi|228639708|gb|EEK96117.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST24] gi|228657034|gb|EEL12857.1| Foldase protein prsA 1 [Bacillus cereus BDRD-Cer4] gi|228726439|gb|EEL77662.1| Foldase protein prsA 1 [Bacillus cereus AH676] gi|296322810|gb|ADH05738.1| peptidylprolyl isomerase [Bacillus thuringiensis BMB171] Length = 286 Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 86/304 (28%), Gaps = 45/304 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + ++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYDQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKDVDKKFD--------EMKKQYGDQFDTLLKQQGIKEETIK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q ++ K + + Sbjct: 104 TGVRAQLAQEKAIEKTITDKELKENYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G Y + +F++ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGYFTAGKMVKEFEDAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSN 311 ++ + P +Q G I + D ++ +K + K + + + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTDIKEQKPFDEVKGDIKKDLVQKKAQDAAFMNDLMMKEIKK 259 Query: 312 AIIH 315 A + Sbjct: 260 ADVK 263 >gi|183601065|ref|ZP_02962558.1| hypothetical protein PROSTU_04689 [Providencia stuartii ATCC 25827] gi|188019406|gb|EDU57446.1| hypothetical protein PROSTU_04689 [Providencia stuartii ATCC 25827] Length = 618 Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 39/398 (9%), Positives = 99/398 (24%), Gaps = 86/398 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T + + +++ F + + Y S+ +NG+ I+ Sbjct: 1 MMDNLRTKANSPFIKVLLAIIILSFVLTGVAGYMIGGSSND-AAKVNGQSISREQFQTAF 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELI-----------------VETLKK 87 + + + L + LI + +K Sbjct: 60 SQERQSLQDSLGDKFSEIAGNEESMKFLRNQVLNNLINSTLMAEYANELNLSASDQQVKD 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA-------- 139 E + + Q SA++ + + I ++ Sbjct: 120 AIFEMPVFQTNGKFDGDKYRQILAANNYSADNLAEQVRANLILSQLSDSFIKTDFALPSE 179 Query: 140 -----------IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT------ 182 + + D K E EI A ++ + ++ Sbjct: 180 VKTYAELVLQEREIRVATLSLADEQAKQTATEDEIKAYYNANQDSFIAPEKVQVSYVEID 239 Query: 183 ------------VLFSIPDNKLQNQGFVQKRIKDAE-------------ESRLRLPKDCN 217 + + + L+N +++ E + Sbjct: 240 AAALPPQSVTDEEVKTYYEQNLKNYTQAEQKHYSMIQVASEKEANAIIDELKAGADFVAL 299 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 EK K+ + G ++ E+ + N + + P + + D + Sbjct: 300 ATEKSTDKLSAGNKGIIGWMEEASTPSEIVNANLTEKGQISTPIKSDSNFVIFRLDDIKP 359 Query: 278 LGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++K + + K K + +K+ A Sbjct: 360 ESIKPLDSVKDEIKNKLIQDKNSKQFYDLQQKVSEAAT 397 >gi|121609649|ref|YP_997456.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verminephrobacter eiseniae EF01-2] gi|121554289|gb|ABM58438.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verminephrobacter eiseniae EF01-2] Length = 643 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 23/255 (9%), Positives = 66/255 (25%), Gaps = 11/255 (4%) Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 + + ++ L + + + + + Sbjct: 151 FEANLRRNIAADQVLDAVLSTALVANAQARLALDALYERRDIQVARFDAPDFAGRVLPTD 210 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKND--FMLKYGNLEMEIPANKQKMK----NITVR 176 + + + Q+ +V + E E+ + Sbjct: 211 ADLQSYYDAHPAQFRQPEQATVEYLVLDLDSVRATITVPEDELRSYYDSDYLPRIMAKQE 270 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKA 234 ++ D + + R + + P D L K +S + G Sbjct: 271 RRASHILISVAKDAPAAEREKAKARATELLAQLRKTPADFAPLAKQSSDDKGSAAAGGDL 330 Query: 235 QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQ 291 + + F+ + + ++ T+ G I + D + G +A ++A+ Sbjct: 331 NFFARGAMTKPFEEAVFALKKGQISDVVETEFGYHIIELTDIKTPPQPGFEEARAVIAAE 390 Query: 292 NTPTKIEKHEAEYVK 306 + ++ AE + Sbjct: 391 LGQQRAQRQFAEMAE 405 >gi|325479410|gb|EGC82506.1| putative peptidylprolyl isomerase PrsA1 [Anaerococcus prevotii ACS-065-V-Col13] Length = 248 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 23/239 (9%), Positives = 67/239 (28%), Gaps = 13/239 (5%) Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + K + G F++ N + +D + + + Sbjct: 19 QDVYKLMANMEDGQRFNNEEGIKVLCDEIVNQEILLKDAVDKKLDEETDFVKELEAVKDN 78 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + + + + + EI A +K K L + D + ++ + Sbjct: 79 MLKNYAM-HKIFEEIKLDDSEIKAYYEKNKENLNPPLLYEASHILVKDLEEASKIKKE-- 135 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNP 260 + +K++ + G + + +FQ + P Sbjct: 136 -------IEEGLEFSEAAKKYSIDPSKDNGGSLGKFPKGVMVKEFQEGLDSIEVGQISEP 188 Query: 261 YVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 +Q G I + + + +K + + K ++ + +++ + + Y Sbjct: 189 VKSQFGYHLIKLENIENVETPSYDEIKDQVKQRVLMIKRQEAYLNKLDEIKKDIEVKKY 247 >gi|255601607|ref|XP_002537715.1| rotamase, putative [Ricinus communis] gi|223515366|gb|EEF24668.1| rotamase, putative [Ricinus communis] Length = 396 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 48/151 (31%), Gaps = 7/151 (4%) Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + E ++ + R + N ++ + K +E + K +K Sbjct: 9 DEEAKKFYEENAAKFQGDEERRASHILVTFNGKKDAAAKAEAKKKIDEILAEVKKSPDKF 68 Query: 220 EKFASKIH-----DVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 + A K + G ++ + F++ S + + P T+ G I + Sbjct: 69 AELAKKYSQDPGSAANGGDLGFVKRGLMVKPFEDALFGMSPGSISGPIETEFGYHIIKLN 128 Query: 274 DKRD-LGGEIALKAYLSAQNTPTKIEKHEAE 303 + + +K + A+ K +E Sbjct: 129 EVKGAAQSFDQVKGQIRAELMYQKALAKFSE 159 >gi|224368972|ref|YP_002603136.1| PpiD1 [Desulfobacterium autotrophicum HRM2] gi|223691689|gb|ACN14972.1| PpiD1 [Desulfobacterium autotrophicum HRM2] Length = 630 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 29/243 (11%), Positives = 67/243 (27%), Gaps = 8/243 (3%) Query: 67 KINGELEKIAVQELIVET--LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 L + V++L+ T + QE + + V + A D + Sbjct: 151 MQLQALREQKVRDLVFSTLSVSDQEARAWYTHSKTQVGIDYLVFNPVAYKDIAVDAKALT 210 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 D +K + + + D+ + + EI A + + + Sbjct: 211 DFYESNKEKYKSEAELTVKYLEFAVKDYQDRVTISDDEIKAYYDENLDQYKVPEKVEARH 270 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I + ++ V+ +AE + + F+ G Sbjct: 271 ILIRVPQDADEATVEAARNEAETIHAKAVGGEDFSLLAKTFSQGPTKDDGGYLGTFARDA 330 Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIE 298 + F + + + P TQ G I + K + A + + +++ Sbjct: 331 MVKPFAEAAFSLASGEISKPVRTQFGWHVIKVEAKLPASTTALDKVAAEIRKTLSTAELK 390 Query: 299 KHE 301 Sbjct: 391 NLA 393 Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 28/237 (11%), Positives = 72/237 (30%), Gaps = 22/237 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I + ++++F + + S + + IN + IT + + Sbjct: 1 MLKLMRENTGSWIIKILLGLIVLVFVFLGMGSIGAKRGNE--VAMINDQPITLNEYQRSY 58 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + Q +++K A+ LI E L E ++ + + + Sbjct: 59 QNIIEQMRQRFGDNLNDEILQMLQVKKQALDRLIDERLISGEADRLKVEVSNQELANSLL 118 Query: 107 -VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + R G+ + + + + +Q++ V++ + E A Sbjct: 119 DIPAFRKNGVFDLATYKVVLSRNRMSPESFEAMQLQALREQKVRDLVFSTLSVSDQEARA 178 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 K +Y L P + E ++ + + K+ Sbjct: 179 WYTHSKTQVGIDY-----LVFNPVAYKDIAVDAKALTDFYESNKEKYKSEAELTVKY 230 >gi|229165978|ref|ZP_04293743.1| Foldase protein prsA 1 [Bacillus cereus AH621] gi|228617531|gb|EEK74591.1| Foldase protein prsA 1 [Bacillus cereus AH621] Length = 286 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 31/304 (10%), Positives = 87/304 (28%), Gaps = 45/304 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + ++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYNQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + + +QG+ + K Sbjct: 52 VLNNMVMEKVLIKNYKVDEKEVDKKFD--------EMKKQVGDQFDTLMKQQGLKEETVK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + ++ K + + Sbjct: 104 NGVRASLAQEQAIEKTITDKELKENYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKS 253 + K +E + + ++++ G Y + +F++ K Sbjct: 143 ---EATAKKVKEELGQGKSFEDLAKQYSEDTGSKEKGGDLGYFTAGKMVKEFEDAAYKMK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRSN 311 ++ + P +Q G I + D ++ +K + K + + + + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTDIKEQKPFDEVKGDIKKDLVQKKTQDAQFMNDLMMKEIKK 259 Query: 312 AIIH 315 A + Sbjct: 260 ADVK 263 >gi|296503398|ref|YP_003665098.1| peptidylprolyl isomerase [Bacillus thuringiensis BMB171] gi|296324450|gb|ADH07378.1| peptidylprolyl isomerase [Bacillus thuringiensis BMB171] Length = 268 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 38/289 (13%), Positives = 81/289 (28%), Gaps = 44/289 (15%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEI 90 +S + S I TT +G I++ D +K++ K + E++VE + + Sbjct: 5 LSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGKQNLSEMVVEKVLHDKY 55 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 + + E D Q + Sbjct: 56 KVTDEEVT---------------KQLKELKDKMGDNFNTYMESNGVKNEDQLKEKLKLTF 100 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 F E + V L++ +K K+ +E Sbjct: 101 AFEKAIKATVTEKDIKDHYKPKLQVSHILVK----------------DEKTAKEIKEKLN 144 Query: 211 RLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVE 268 ++++ G+ + +F++ K + P + G Sbjct: 145 SGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKLEVGQLSEPVKSSFGYH 204 Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRSNAIIH 315 I + DK++L K + + +I+ + + + L NA I Sbjct: 205 IIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRDLLKNADIK 253 >gi|222823915|ref|YP_002575489.1| major antigenic peptide PEB-cell binding factor [Campylobacter lari RM2100] gi|222539137|gb|ACM64238.1| major antigenic peptide PEB-cell binding factor [Campylobacter lari RM2100] Length = 271 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 31/296 (10%), Positives = 89/296 (30%), Gaps = 33/296 (11%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET 84 +V ++++ + T++G I+D ++++ A + +L + +I + Sbjct: 4 ISLVAAALLTGLSLNAAVVATLDGNNISDTEVNEFFAPMLRGAKITDLPAEQKKAIIDQY 63 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 + +Q + K + + + A ++I Sbjct: 64 IVQQLVLKD---------------------------AKAQKIENDPSYKEELERAKEAIL 96 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 ++ + N + + + K+ + ++ + K + Sbjct: 97 VNIYQKKIFDSIKNDDAKAKKFYEANKDKFTKPAQVKAKHILVTSEKEAKDIIAELSKLS 156 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYV 262 + + + + K K G + ES + F + + + P Sbjct: 157 GKALNDKFAQLAKE--KSIDKGSSAQGGDLGWFAESTMVKPFADAAFSMKKGTISKTPVK 214 Query: 263 TQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G I D R +KA + + + ++ + ++L A + Y Sbjct: 215 SDFGYHIILKEDARAKSTMSYNEVKAGIESNIKMEEFKELMNKKAQELLQKAKVEY 270 >gi|313158136|gb|EFR57541.1| PPIC-type PPIASE domain protein [Alistipes sp. HGB5] Length = 468 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 26/257 (10%), Positives = 76/257 (29%), Gaps = 15/257 (5%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQ 88 M ++ + I +++ L Q+ + A++ L+ + L Sbjct: 23 QQVMLDKVVAVVGSSSILYSEVADHARQLTAQRRAEGYTSDRDPMNEALEALMTQKLLFN 82 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV- 147 + + + ++ + + +N + K + + ++ + + Sbjct: 83 QAQIDSVKINAGDIASHVEEQVQNMIEAEGSIPRLEAKHHMAIFNIRENMRQRYEEQSYA 142 Query: 148 --VKNDFMLKYGNLEMEIPANKQKMKNIT----VREYLIRTVLFSIPDNKLQNQGFVQKR 201 ++N+ + K + E+ + + + +Y+ + Q ++ Sbjct: 143 SSMQNEVVSKVAVIPGEVERFYKSIDKDSLPTIAEQYVYAQITRFPKSITQAKQRTRERL 202 Query: 202 IKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN 259 + E K N ++ + G+ + L F + Sbjct: 203 LDMRERVITGKAKFENLARMYSQDPGTMMRGGEMDPAPLASLDSSFAAALENMKPGQISE 262 Query: 260 PYVTQKGVEYIAICDKR 276 +Q G I + DKR Sbjct: 263 VVESQFGFHIIQMLDKR 279 >gi|94967775|ref|YP_589823.1| hypothetical protein Acid345_0744 [Candidatus Koribacter versatilis Ellin345] gi|94549825|gb|ABF39749.1| hypothetical protein Acid345_0744 [Candidatus Koribacter versatilis Ellin345] Length = 343 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 44/300 (14%), Positives = 97/300 (32%), Gaps = 19/300 (6%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALL---------KLQKINGELEKIAVQELIVET 84 ++ +NG V+T+ D+ + + + +K+ E+ K A+Q ++ E Sbjct: 43 ARPVDETKPVARVNGTVLTERDLLREMYTIFPYAAQHNGVPKKMEPEMRKGALQMIVFEE 102 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 L QE + ITFD + ++ + + E + + Q + + + Sbjct: 103 LVYQEAVRRKITFDPSIISKGEAEMRKQFPSQQEFDAWIVA-QFGSRQAMHEKMRRTMLV 161 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI-- 202 ++K + K + + A + R SI + N ++ Sbjct: 162 QILLKKEVNDKSVVTDAQAKAFYEANSKQFDRPETFSIQTISIIPPQGANPEVKKEADKR 221 Query: 203 ----KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ-FQNLLKKSQNNT 257 A ++ + EK + V +G + + + L P + L Sbjct: 222 AHDAFKAAKATKTYEEFGLLAEKVSDDDWHVKMGDRKAIDRASLPPDVVKAALVMKPGEV 281 Query: 258 TNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++ + +KA L K E+ + K+LR +A + Sbjct: 282 SDLIQIGPNYTMFRLNAHTPAGRTPFGEVKAKLQEDMKKAKTEQLRGSFDKQLRQSAKVE 341 >gi|170717232|ref|YP_001784350.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haemophilus somnus 2336] gi|168825361|gb|ACA30732.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haemophilus somnus 2336] Length = 618 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 33/393 (8%), Positives = 92/393 (23%), Gaps = 82/393 (20%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG----DI 56 + K+ + S + + + + F + + Y + + +NGE I+ Sbjct: 2 LMEKLNNASSGIVSKIIFGLIGVSFVLSGVAGYM-FIRTDTSVAKVNGEEISQQVFLQQY 60 Query: 57 SKRIALLKLQ----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 + L L + LI + L +Q ++ + V+ Sbjct: 61 NNEYQRLSENLGAKFAEVADSAAKHLRHEVLDRLINQELLRQYAQELKLGISDKQVSLAI 120 Query: 107 ---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML--------- 154 + + L GI + + Y+ + + + Sbjct: 121 VNSPMFQNEGKFDNKIYQQILASSGISSDTYAAYVREGLVLEQLQQGIANSDFQVPIQLN 180 Query: 155 ------------------------KYGNLEMEIPANKQKMKNIT---------------- 174 K E EI Q K Sbjct: 181 ELAKNFFQRRDVRLAVLSLDDEMQKQTVTEQEIEQYYQANKANFAVPERVKVQYLDLTRA 240 Query: 175 ---VREYLIRTVLFSIPDNKLQNQGFV---------QKRIKDAEESRLRLPKDCNKLEKF 222 + + + + ++ + + + + Sbjct: 241 IADQKVKISDIEIAQYYQDNKAQYITKHLAHIQLPTEQEAQSVYANLQNGEDFSALAKLY 300 Query: 223 A-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + + G +++ + F++ + + + P I + D + Sbjct: 301 SMDTLSAQKGGDLDWVVNGMMPLAFESAVTLLNVGEYSQPVKVDNAYHIIKVLDMKTREL 360 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +K ++ + + K++ A Sbjct: 361 -NDVKEEIATKLRNDLVTNAFYSLEKQMNEKAF 392 >gi|66769563|ref|YP_244325.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. campestris str. 8004] gi|66574895|gb|AAY50305.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. campestris str. 8004] Length = 656 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 17/191 (8%), Positives = 54/191 (28%), Gaps = 9/191 (4%) Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + D H + + +++ + V+ + + +++ + R L Sbjct: 231 QIKQWYDGHPQDFRQPETVTIEYVELNAATLPPATAADEATLRKRYEEEKARFVEPDQRL 290 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLR-----LPKDCNKLEKFASKI-HDVSIGKAQYLL 238 S + QK ++ + + + G ++ Sbjct: 291 ASHILISAGSDAAAQKAGEEKAAKLAAQAKQPGADFAALAKANSQDPGSKDAGGDLGWVE 350 Query: 239 ESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + F++ + P T+ G I + + + G+ + Q ++ Sbjct: 351 KGTMVKPFEDALFAMKAGDVVGPIKTEFGYHVIQLREVKGGQGKS--FEQVRDQLAAEQL 408 Query: 298 EKHEAEYVKKL 308 + + L Sbjct: 409 KADADKAFADL 419 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 24/236 (10%), Positives = 56/236 (23%), Gaps = 34/236 (14%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-------------- 46 M K+ S +I ++I F V SY ++ + Sbjct: 1 MLQKLRDKTSGWIATAILGLLMIPFLFVIDNSYLGGIGANN-VAKVQAPPTWWKSAPSWW 59 Query: 47 ------NGEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++Q+ + E + +L+ E + + Sbjct: 60 PVSLLWQHHEISTQDFRARFEQSRMQERQRQGENFDPRQFESRENKLQVLDQLVDEQVVR 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E +GI TV + + G + + Sbjct: 120 LGAEDAGIVIGDATVRDYIANIPAFQIDGKFSPDQYRAALAQGTPPRTPAQFDALVRDSL 179 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++ + +++ + + + P Q + Sbjct: 180 QQSVIPQAVAESGFATKSEFERLLTLMGETRDVELAMLPEPTADTAPVSDAQIKQW 235 >gi|256830955|ref|YP_003159683.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfomicrobium baculatum DSM 4028] gi|256580131|gb|ACU91267.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfomicrobium baculatum DSM 4028] Length = 632 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 15/222 (6%), Positives = 59/222 (26%), Gaps = 7/222 (3%) Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 + T++Y + + ++ + + + Sbjct: 181 YTYGRSTATISYLMYPWENYQNQVNATDARINEYYEARKANYAVPARAKIDYLLLTPATL 240 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA---EESR 209 E + K E ++ + ++ ++ V+K ++ ++ Sbjct: 241 ADPAAVSPEETEKYYAEQKEQFKIEEQVKASHLLVRVDENADEESVEKAMQTIKAAQKDL 300 Query: 210 LRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 ++ G+ + + F++ + + P TQ G Sbjct: 301 AAGKSFAEVAAQYTEDPSGTQTGGELGWFGRGRMVKPFEDAAFALEKGAVSEPVRTQFGF 360 Query: 268 EYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 I + D + ++ + ++ + + + + + Sbjct: 361 HLITVEDTKSAGYENYESVASDIANIIAEDRAAEILQDRLDQ 402 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 29/324 (8%), Positives = 81/324 (25%), Gaps = 33/324 (10%) Query: 1 MTSKVFTSLSDF-IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR 59 M + + IK+L + + + ++ + T+N I +R Sbjct: 1 MLDILRQGAQSWGIKILFGIIIAVFVLAFGMNRVQNDQT--TVVATVNDSPILFRPFQER 58 Query: 60 IALLKLQKINGE------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + + ++ ++++++E L Q+ K G+T + Sbjct: 59 LQRSLELARSQNPNLTAEILAQMGFKRQILEQMVIEELMMQQAAKLGLTVSKEELAKEIH 118 Query: 108 QHARN----TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + + L + F+ + + + L E + Sbjct: 119 LIPAFQNESNVFDPASYQNVLRANNLTPGKFESEYMRGMVMDKL-RTYVGLPGRLGEDQA 177 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 ++ Y L +N RI + E+R + + Sbjct: 178 RDFYTYGRSTATISY-----LMYPWENYQNQVNATDARINEYYEARKANYAVPARAKIDY 232 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 + ++ + + P+ Q K + + D + Sbjct: 233 LLLTPATLAD-----PAAVSPEETEKYYAEQKEQFKIEEQVKASHLLV---RVDENADEE 284 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKK 307 + + + + Sbjct: 285 SVEKAMQTIKAAQKDLAAGKSFAE 308 >gi|332521070|ref|ZP_08397528.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lacinutrix algicola 5H-3-7-4] gi|332043163|gb|EGI79360.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lacinutrix algicola 5H-3-7-4] Length = 482 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 29/286 (10%), Positives = 78/286 (27%), Gaps = 16/286 (5%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKI--NGELEKIAVQELIVETLKKQEIEKSGITF 97 + + ++ D D+ K I LK + L+ + L + I Sbjct: 58 DGVAAVVGEYIVLDSDVDKTILQLKASGNDISQFTNCELFGRLLEDKLYAHHAIQDSIVV 117 Query: 98 D----SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + VN + N E + + + ++ + Sbjct: 118 SDAEIRSYVNQQVERFRVNFKTEDEMLKFYKKDNIKALTDEMFEINKANKLASEMQRKIV 177 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E+ ++ + + + I Q+ I E + + Sbjct: 178 DEIEVTPEEVRQYFSEIPDNEKPTFGTELKVAQIVIEPKVTPEAEQEVIDRLNEFKKDVE 237 Query: 214 KDCNKLEK-----FASKIHDVSIGKAQYLLES--DLHPQFQNLLKK-SQNNTTNPYVTQK 265 ++ A + G+ + + + +F+ + + P+ T+ Sbjct: 238 ENGASFSAKALFNSADTGSKRTGGRLPTMNRAKPQMVKEFREATFSLQEGEISEPFKTEF 297 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 G + + R + + L + + E ++ +R N Sbjct: 298 GWHIVYLEKIRGQEYD--ARHILLIPEISDEAKAEAKEKLEGIRQN 341 >gi|188992771|ref|YP_001904781.1| Peptidylprolyl isomerase [Xanthomonas campestris pv. campestris str. B100] gi|167734531|emb|CAP52741.1| Peptidylprolyl isomerase [Xanthomonas campestris pv. campestris] Length = 656 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 17/191 (8%), Positives = 54/191 (28%), Gaps = 9/191 (4%) Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + D H + + +++ + V+ + + +++ + R L Sbjct: 231 QIKQWYDGHPQDFRQPETVTIEYVELNAATLPPATAADEATLRKRYEEEKARFVEPDQRL 290 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLR-----LPKDCNKLEKFASKI-HDVSIGKAQYLL 238 S + QK ++ + + + G ++ Sbjct: 291 ASHILISAGSDAAAQKAGEEKAAKLAAQAKQPGADFAALAKANSQDPGSKDAGGDLGWVE 350 Query: 239 ESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + F++ + P T+ G I + + + G+ + Q ++ Sbjct: 351 KGTMVKPFEDALFAMKAGDVVGPIKTEFGYHVIQLREVKGGQGKS--FEQVRDQLAAEQL 408 Query: 298 EKHEAEYVKKL 308 + + L Sbjct: 409 KADADKAFADL 419 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 24/236 (10%), Positives = 56/236 (23%), Gaps = 34/236 (14%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-------------- 46 M K+ S +I ++I F V SY ++ + Sbjct: 1 MLQKLRDKTSGWIATAILGLLMIPFLFVIDNSYLGGIGANN-VAKVQAPPTWWKSAPSWW 59 Query: 47 ------NGEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++Q+ + E + +L+ E + + Sbjct: 60 PVSLLWQHHEISTQDFRARFEQSRMQERQRQGENFDPRQFESRENKLQVLDQLVDEQVVR 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E +GI TV + + G + + Sbjct: 120 LGAEDAGIVIGDATVRDYIANIPAFQIDGKFSPDQYRAALAQGTPPRTPAQFDALVRDSL 179 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++ + +++ + + + P Q + Sbjct: 180 QQSVIPQAVAESGFATKSEFERLLTLMGETRDVELAMLPEPTADTAPVSDAQIKQW 235 >gi|294672825|ref|YP_003573441.1| peptidylprolyl isomerase domain-containing protein [Prevotella ruminicola 23] gi|294471979|gb|ADE81368.1| peptidylprolyl isomerase domain protein [Prevotella ruminicola 23] Length = 452 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 26/265 (9%), Positives = 75/265 (28%), Gaps = 16/265 (6%) Query: 40 SRIRTTINGEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 + + E I D+ + + ++ K +G + +++ V+ L K + + I Sbjct: 25 DEVVWVVGDEAILRSDVEALRMQSAMEGVKWSGNPDCTIPEQIAVQKLFKHQAQIDSIEV 84 Query: 98 DSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK---NDFM 153 V Q + + + + L + +V+ + Sbjct: 85 TDADVAQEVEQQISYWLEMVDGSRERLEEYKHQNLTQIRADLREEMKDRQMVQKMKQKLV 144 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 E+ + ++ + + Q + + + R+ Sbjct: 145 EDIAVTPAEVRRYFSALPQDSLPFVPTEVEVQIVQLTPKIEQEELNRVKDELRNYTERVN 204 Query: 214 K----DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQN--NTTNPYVTQKG 266 K + ++ G+ + L P F + + + ++ G Sbjct: 205 KGETRFQTLAQLYSEDPGSARRGGELGLMGRGTLDPAFAAVAFNLTDPKKVSKIVESEFG 264 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQ 291 I + +KR G+ ++ + Sbjct: 265 FHIIQLIEKR---GDKVNVRHILRK 286 >gi|146296118|ref|YP_001179889.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409694|gb|ABP66698.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 340 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 31/334 (9%), Positives = 93/334 (27%), Gaps = 23/334 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 S + + +I+ ++ +++ +NG+ IT + R LK Sbjct: 1 MNRKSLIVITSIIFVSIILSLLILKDHIVKMIDDNKVVLEVNGDQITKREYKIRFNTLKE 60 Query: 66 QKINGELEKIAVQEL----------------IVETLKKQEIEKSGITFDSNTVNYFFVQH 109 I + ++ I+ E ++ Sbjct: 61 NAIQFSSRTDILDQVFNGKTYRELLKDELFRILIEELLCLQEARRKNIYLTRQEEDEIRK 120 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + ++ ++ + + ++ + + + + Sbjct: 121 YIEELKRDMEMRNYFNQYLRKIGSDENHFYRDLQKTRIINKLYKYVTERITLSDSEVIKY 180 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-D 228 + I+ + + + +K + R ++K++ D Sbjct: 181 YNANKSQFRKIKVMDIFLRVENAEEDAKKRKVANEIISELKRGEDFEKLVKKYSEVESLD 240 Query: 229 VSIGKAQYLLESDLHPQF-----QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 G Y + + Q+ + + K + +N T G + + D++ Sbjct: 241 GKKGIIDYFRKGEKEAQYGSVFEEEVFKLAVGQISNVIKTVNGYHIVKVIDEK-YMPFDE 299 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 +K + + K ++ Y++ L+ + I Y Sbjct: 300 VKGEIQTKLIKQKKDEVFKSYIESLKKMSKISIY 333 >gi|229131944|ref|ZP_04260809.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST196] gi|228651535|gb|EEL07505.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST196] Length = 286 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 31/304 (10%), Positives = 87/304 (28%), Gaps = 45/304 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + ++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYNQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + + +QG+ + K Sbjct: 52 VLNNMVMEKVLIKNYKVDEKEVDKKFD--------EMKKQVGDQFDTLMKQQGLKEETVK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + ++ K + + Sbjct: 104 NGVRASLAQEKAIEKTITDKELKENYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKS 253 + K +E + + ++++ G Y + +F++ K Sbjct: 143 ---EATAKKVKEELGQGKSFEDLAKQYSEDTGSKEKGGDLGYFTAGKMVKEFEDAAYKMK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRSN 311 ++ + P +Q G I + D ++ +K + K + + + + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTDIKEQKPFDEVKGDIKKDLVQKKTQDAQFMNDLMMKEIKK 259 Query: 312 AIIH 315 A + Sbjct: 260 ADVK 263 >gi|324326356|gb|ADY21616.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 283 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 89/309 (28%), Gaps = 50/309 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 + L +++ + S + T + +T+ ++SK L+ + L Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQKYGESTLY 55 Query: 74 KIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + + L+ + E K + + + F GL ED Sbjct: 56 QMVLSKALLDKYKVSDEEAKKKVEEAKDKMGENFKATLEQLGLKNED------------- 102 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K+ + + + +K K + + Sbjct: 103 ELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD------------------ 144 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ +E ++++ G+ +F+ Sbjct: 145 ------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEEAAY 198 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306 K + P T G I + DK++L +K + +++ ++ V Sbjct: 199 KLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQVVN 258 Query: 307 KLRSNAIIH 315 +L +A I Sbjct: 259 ELLKDADIK 267 >gi|148655481|ref|YP_001275686.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseiflexus sp. RS-1] gi|148567591|gb|ABQ89736.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseiflexus sp. RS-1] Length = 337 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 30/290 (10%), Positives = 82/290 (28%), Gaps = 28/290 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING-----------ELEKIAVQELIVETLKKQEIE 91 ++ +T ++ +RI ++ ++E+ V + I + L Sbjct: 26 VARVDNVTLTRQELDQRIDRIEKGFAQQAGMGFPLPSRLDIERELVSQFIDQQLTLGLAR 85 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 + GIT VN + + + ++ +G + + + Sbjct: 86 QRGITVSDGEVNDQIERFRQQIQMGGGMSLEQAIQEQLGLPGEASPEFRLFVTYFLARQK 145 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + ++ T R + TV + + + + +++ + Sbjct: 146 LGETLVSENDIRQRITDEVMADTQRMVDVATVAHILVATEDEAKQVIER--------LDK 197 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK--SQNNTTN-PYVTQKGV 267 + ++ + + G + + P+F + + TT P TQ G Sbjct: 198 GEAFADLAKELSQDPGSANNGGVYENIQRGQFVPEFDKAMFEDLQPGETTKTPVQTQFGW 257 Query: 268 EYIAICDKRDLGGEIALKAY--LSAQNTPTK---IEKHEAEYVKKLRSNA 312 I + + A + + + ++ R A Sbjct: 258 HVIRLVSRGQAPALDPADAQAVIEQRVAQELPFEQQTAFERLLQSEREKA 307 >gi|238024223|ref|YP_002908455.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia glumae BGR1] gi|237878888|gb|ACR31220.1| Putative PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia glumae BGR1] Length = 319 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 25/289 (8%), Positives = 62/289 (21%), Gaps = 55/289 (19%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 + +NG IT + + + Q + +LI L +Q + Sbjct: 72 EGVVARVNGVAITRDQLEQA-RVAANQPDTASVRAALKNQLITRELLRQAAASAHYDT-- 128 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + ++ +++ + Sbjct: 129 ----------------------------YPQVLAAVEQAKSLAMTQAWLRDHIKPEPVTD 160 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + + + E R ++ + +++ Sbjct: 161 AEVKAKYDEVVAGLGQTELKPRVIVLKDRASADAALAQLKQ-----------GADFAQLA 209 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-----------NNTTNPYVTQKGVE 268 + A + G ++ P T+ P Sbjct: 210 RQAADGPNAAQGGALNWVSFRQPVPPGGQQGWPQPLAEALLKLPVGGVTSAPVEADGRFW 269 Query: 269 YIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + +KR + K L ++K E + L A I Sbjct: 270 ILRVDEKRATRIPAYADAKDVLRRGLEQAALQKATIETMVGLLKQAQIQ 318 >gi|328956331|ref|YP_004373664.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Coriobacterium glomerans PW2] gi|328456655|gb|AEB07849.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Coriobacterium glomerans PW2] Length = 404 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 42/347 (12%), Positives = 99/347 (28%), Gaps = 35/347 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + V ++ F LL+ + + + KS+ ++ + T+NG I + I+++I Sbjct: 36 IVKIVLVAIGVFAMLLSVTTMACAGIMNQAKTKKSYELTGGVAATVNGVNIKEDSITEQI 95 Query: 61 ALLK-----------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 K + EL K ++ L + L + +K IT + +N Sbjct: 96 MQTKEGGKYDTDEKWAKYLVDSNQTPEELRKTKIKSLAKQYLIEDAEKKHDITVSDDELN 155 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + + + S+ +K + + + +I Sbjct: 156 DDWKDQVKKYDSEQAFIDQIKK--MGMTEASYKSSIRNSLMQKKLKEEVAPEKDPSDQDI 213 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQ--NQGFVQKRIKDAEESRLRLPKDCNKLEK 221 K + +LF I + + +K ++ + EK Sbjct: 214 IDYVNKDISKYNDARRSSNILFKIESGADEQSDAKVKEKAQGVLDKINSGELTFEDAAEK 273 Query: 222 FASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA-------- 271 ++ G + + ++Q+ + + + + G I Sbjct: 274 YSEDDGSKKDKGDVGWDKLTTFVKEYQDALNNLAADQVSGLVKSTYGYHIIRCTGYFHVD 333 Query: 272 --ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + +K +S K + L A I Sbjct: 334 GTVNSIDQIP--KNMKEKISDTIKKDSSSKAYTAWEDDLVDKADIKI 378 >gi|228945944|ref|ZP_04108286.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228813692|gb|EEM59971.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 288 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 31/312 (9%), Positives = 86/312 (27%), Gaps = 48/312 (15%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKIN 69 + +L L +++ + S + T + IT+ ++SK + Sbjct: 2 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--ITEKELSKELR-------- 51 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + + + ++++ + + S + S+ Sbjct: 52 QKYGESTLYQMVLSKALLDKYKVSDEEAKKQVEE-------AKDKMGDNFKSTLEQVGLK 104 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 ++ K+ + + + +K K + + Sbjct: 105 NEDELKEKMKPEIAFEKAIKATVTEKDIKDNYKPEMKVSHILVKD--------------- 149 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN 248 +K K+ +E ++++ G+ +F+ Sbjct: 150 ---------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEE 200 Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY--- 304 K + P T G I + DK++L +K + +++ ++ Sbjct: 201 AAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQ 260 Query: 305 -VKKLRSNAIIH 315 V +L +A I Sbjct: 261 VVNELLKDADIK 272 >gi|229918171|ref|YP_002886817.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Exiguobacterium sp. AT1b] gi|229469600|gb|ACQ71372.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Exiguobacterium sp. AT1b] Length = 333 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 31/303 (10%), Positives = 79/303 (26%), Gaps = 35/303 (11%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 ++ + + T G IT G+I + + + + Sbjct: 26 AIALIIGAGGTYAATNAGGGESDNSAVVTYKGGEITRGEI---ADMSYDRMVPQLAFQET 82 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + L+ + + G D V+ F + E + G FK+ Sbjct: 83 MNALLEK--------EYGDQVDQEKVDEEFSKTEEQFNSEEEFEQAIQQAGMSGTEEFKE 134 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 L Q + + +E + ++ Sbjct: 135 ALRGQMLVDAAKSKLVDVTDEEIEAQFAKE-------------------NVEVEASHILV 175 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254 ++ +D + ++ ++ G+ + + P+F+ K Sbjct: 176 ETEEEAQDIIKELNDGADFAELAKEKSTDTGSGEKGGELGFFSAGAMVPEFEEYAFKEDV 235 Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKH-EAEYVKKLRSN 311 + P +Q G I + D+++ + K + + K + +L Sbjct: 236 VGKISEPVQSQFGFHVIKVTDRKEKDLKLEDEKDRIREELAAEKSASVDANKIYAELIEK 295 Query: 312 AII 314 + Sbjct: 296 YNV 298 >gi|269792688|ref|YP_003317592.1| hypothetical protein Taci_1078 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100323|gb|ACZ19310.1| hypothetical protein Taci_1078 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 340 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 31/328 (9%), Positives = 99/328 (30%), Gaps = 22/328 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVS-YKSWAMSSRIRTTINGEVITDGDISKR 59 M + ++ + + F++ F + + + ++G+ I + R Sbjct: 2 MMQYLRNNVKGIMIGVVVVFIVSCFAGYGMYVRGRGSSGGDYPVAKLDGKKIMRSQVEMR 61 Query: 60 IALLKLQKIN-------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + Q + + ++ + +++V + + GI V+ + Sbjct: 62 LREVAEQFGDRVTSGDVPMIRRMILDDIVVGMELTKAAKAEGIKVAKEEVDQYLASMQAQ 121 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + E + +L + G+ + ++ + +++ E+ K+ Sbjct: 122 F-PTKEAYDEYLKRSGMTERELRRKVEENIAVGKLME-KVTASASVDAGEVRKFYDATKD 179 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + TV K Q L+ + + + + + + Sbjct: 180 AFFKRPEGYTVNVVAFRGKEAAQ--------RGRTRLLKGEAWDSVMGAMSGDLGNFTPY 231 Query: 233 K-AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI---CDKRDLGGEIALKAYL 288 ++ + DL ++++ + +N + + +K + +K + Sbjct: 232 DKPIFVSKKDLADDLKSVISLKVGSYSNLVKVGSDDYLMVLKRSNEKERVMAFDEVKEQI 291 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + + YV L A + Sbjct: 292 EGVLLDQKRGQMQRAYVADLLKKAPLEI 319 >gi|330809635|ref|YP_004354097.1| peptidylprolyl isomerase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377743|gb|AEA69093.1| putative peptidylprolyl isomerase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 314 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 20/241 (8%), Positives = 65/241 (26%), Gaps = 9/241 (3%) Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA-- 139 E + R + ++ Sbjct: 58 DELKALLAALAPEVRQQMRGNRAALEGWIRARLAEKAVLEQADAQGWRERPEVERQTRAA 117 Query: 140 -IQSIWPDVVKN--DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q ++ D +++ Y + + A N T + +F + Sbjct: 118 AEQIVFRDYLQSVSQVPAGYPSEDELKQAYDAGKANWTAPALYRVSQIFLATTEPQTVEA 177 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDL-HPQFQNLLKKSQ 254 ++ ++ +++++ + +F+ G + + L P + + + Sbjct: 178 VRRQALELSKKAQASPAEFGALASRFSQDRSSAERGGDSGFQPLQQLVPPVRETVARLKV 237 Query: 255 NNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 ++P + G I + +++ ++ L+ + E+ Y+ + A Sbjct: 238 GAVSDPVQSPAGFHVIKLTEQQPAREATLDDVRERLTQALRAQRQEQIAKAYLDGMLDTA 297 Query: 313 I 313 Sbjct: 298 T 298 >gi|73541086|ref|YP_295606.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha JMP134] gi|72118499|gb|AAZ60762.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha JMP134] Length = 264 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 50/175 (28%), Gaps = 16/175 (9%) Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 V D++ +G + E+ K+K+ + + + Sbjct: 99 VFEDYVKTHGASDDELRKQYDKIKSQFGNGKEYHVRHILVEKEADAKAIIAKIK------ 152 Query: 208 SRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQ 264 K + + + + G + P+F + + T+ P TQ Sbjct: 153 ---GGAKFEDMAKASSKDPGSAANGGDLDWANSGSYVPEFSAAMTTLKKGQMTDTPVKTQ 209 Query: 265 KGVEYIAICDKRDL--GGEIALKAYLSAQNTPTK--IEKHEAEYVKKLRSNAIIH 315 G I + D RD +K L + + +K L+ A I Sbjct: 210 FGWHIIELVDTRDAKIPSFEEVKPQLMQMMMGDQNWQREQFQAMMKSLKDKAKIQ 264 >gi|327479988|gb|AEA83298.1| NifM protein, putative a peptidyl-prolyl cis/trans isomerase [Pseudomonas stutzeri DSM 4166] Length = 292 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 36/255 (14%), Positives = 79/255 (30%), Gaps = 8/255 (3%) Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + + E+I ++L +E E G+ V + + A L Sbjct: 31 SSQQREQAERIVGRQLQLENAVLHSAEACGVVIPDEQVADAWAEIAARYEDPLALHK-AL 89 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRT 182 D G+ + +Q LA + V++ + E+ L R Sbjct: 90 DDSGLDEAGLRQLLARELKVETVLQRVCAGLPEITDTEVSLYYFNHPERFVRPATRLARQ 149 Query: 183 VLFSIPDNKLQNQGFVQ--KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 +L ++ ++ +N + AE + + + K + + G + Sbjct: 150 ILITVNEDFPENSRTSAWRRINLIAERLLRKPQRFAEQALKHSECPSAMEGGSLGLIRPG 209 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKI 297 L+PQ + L T G + + G + +L + + Sbjct: 210 VLYPQLEACLFALRAGEIGPVVETPLGFHLLFCEEIHPAGHLSLQEVLPHLREKLRARQY 269 Query: 298 EKHEAEYVKKLRSNA 312 E+H+ ++ L +A Sbjct: 270 ERHQRAWLAGLLQSA 284 >gi|34498387|ref|NP_902602.1| signal peptide protein [Chromobacterium violaceum ATCC 12472] gi|34104241|gb|AAQ60600.1| probable signal peptide protein [Chromobacterium violaceum ATCC 12472] Length = 262 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 30/299 (10%), Positives = 77/299 (25%), Gaps = 50/299 (16%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-----KINGELEKIAVQE 79 + + + S +++ +NG I ++ + + + + EL + Sbjct: 6 IAALTLAASISLPVAAESIAVVNGVSIDKSELDAAVTNVVQSSGGKMQDSPELREQLKNS 65 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 LI L QE + G+ + Sbjct: 66 LIGRQLILQESTRRGLDKQPAFAKR------------------------------MDEVR 95 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + + + + + + + + Sbjct: 96 AELLRDALFADIAEKANVGDAQIKARYDEMAAQVAGSKEVHAYQITLGS----------E 145 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDL-HPQFQNLLKKSQNNT 257 + + K ++ + + S G + S + + L + Sbjct: 146 ADAQKVIAQLKKGAKFDELVKTRSIDPNAKQSGGDMNWGNLSRMEPKLAEALKAIPKGQV 205 Query: 258 T-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + PY +Q G + D R+ + Q E+ A+ V+ LR+ + I Sbjct: 206 SSAPYQSQLGWHVFKVADIRNAQV--PPLDAVKPQIARQLQEEAIAKAVEDLRAKSKIQ 262 >gi|289423524|ref|ZP_06425325.1| foldase protein PrsA [Peptostreptococcus anaerobius 653-L] gi|289156026|gb|EFD04690.1| foldase protein PrsA [Peptostreptococcus anaerobius 653-L] Length = 252 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 31/278 (11%), Positives = 76/278 (27%), Gaps = 46/278 (16%) Query: 43 RTTINGEVITDGDISKRIA----LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98 I + IT D+ I+ + Q N E K + +LI + L + ++ + D Sbjct: 7 LAKIGDKEITAADVEAAISSIDPYQRQQFDNEEGRKRILADLINQELFYLDAIENKLDQD 66 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 N V + + N + Sbjct: 67 ENFVKEMELIKIN-------------------------------MIKQYAINKIIASVEV 95 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + E ++ K V ++ + + + + K+ + Sbjct: 96 SDEEKLNYYEENKAQFVSPEMVSAKHILVDEEDQAKEIKTKIDKKEM--------SFEDA 147 Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277 +++ ++ G + + P+F+ + P +Q G I + ++ Sbjct: 148 AVEYSKCPSNMKGGDLGEFGKGQMVPEFEEAAFALEVGKVSEPVKSQFGYHIIKVESHKE 207 Query: 278 LG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 G +K ++ K + + +L Sbjct: 208 EGQLEFEDVKDEVANAVAYKKQNEAFVGKLTELTDRYK 245 >gi|228938272|ref|ZP_04100886.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971151|ref|ZP_04131783.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977759|ref|ZP_04138144.1| Foldase protein prsA 1 [Bacillus thuringiensis Bt407] gi|228781967|gb|EEM30160.1| Foldase protein prsA 1 [Bacillus thuringiensis Bt407] gi|228788577|gb|EEM36524.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821408|gb|EEM67419.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938780|gb|AEA14676.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar chinensis CT-43] Length = 289 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 92/304 (30%), Gaps = 42/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + ++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYDQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + + +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKDVDKKFD--------EMKKQYGDQFDTLMKQQGIKEETIK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q V+ K + E + K +I V++ Sbjct: 104 NSVRAQLAQEKAVEQSITDKDVKAKFEDYKKEIKASHILVKD------------------ 145 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 ++ K ++ + ++++ G + + +F+ +K Sbjct: 146 ---EETAKKVKDELAQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEEAAQKLK 202 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRSN 311 + + P TQ G I + D KA + K + + + + K Sbjct: 203 KGEVSEPVKTQFGYHIIKVTDNHADATFDKAKADIKKSLAQEKTQDAQFMNDLMMKEIKK 262 Query: 312 AIIH 315 A + Sbjct: 263 ADVK 266 >gi|293391759|ref|ZP_06636093.1| SurA protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952293|gb|EFE02412.1| SurA protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 615 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 41/392 (10%), Positives = 91/392 (23%), Gaps = 81/392 (20%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 K+ + +++ F+ + F I + Y + S +NGE I+ + Sbjct: 3 MEKLHGASNNWASKFLFGFITVTFVISSMAGYLYSRIDSS-AAKVNGEEISQQAFQNQYN 61 Query: 62 LLKLQKING---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQH 109 + L++ + LI + L +Q ++ + + Sbjct: 62 IASQNLSPQEADSPTVVANLKRQVLSSLIDQELLRQYVKDLKLGVSDERIKQEIVTTPSF 121 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-------------------- 149 N + L GI + Y+ + Sbjct: 122 QNNGKFDNVLYQQLLQSNGISAETYAGYVREALRLEQLQSGLGITAFTVPVQQEALAKLF 181 Query: 150 -------------NDFMLKYGNLEMEIPANKQKMKNIT---------------------- 174 D + K EI A K Sbjct: 182 FQRRDVRLATLSLADEIAKQTVSAEEIQAYYDAHKADFTLPELVKVQYLDLSGANMEKNI 241 Query: 175 --VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA--------S 224 + + + Q Q + E+ L + +F+ Sbjct: 242 NISDVEIAQYYQDNKSQFMTQGQQRLAHIEVKTEQQAQDLYQQLQNGAEFSTLAKNHSID 301 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GE 281 I G ++ + F++ + P I + ++D Sbjct: 302 PISAEKGGDLSWVSAGEFPKVFEDAANALDVGKFSQPVKLDNSYHIILVEGRKDSAVLPL 361 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++ + AQ + K++ A Sbjct: 362 ERVRPQIVAQIRQNLVNNQFFSVEKRVAEKAF 393 >gi|218297017|ref|ZP_03497694.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermus aquaticus Y51MC23] gi|218242572|gb|EED09109.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermus aquaticus Y51MC23] Length = 603 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 25/316 (7%), Positives = 71/316 (22%), Gaps = 26/316 (8%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-RIALLKLQKINGELEKI 75 ++ I+ + +NG+ + + D+ + + L K+ Sbjct: 15 FLALAFVVGAILLFTPQAGQEAKGKPVLWVNGKAVYELDLLRLQGNDPLYAANPQGLLKV 74 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 V +E + E K + R ++ + Sbjct: 75 LVDTHFLEQVILTEALKQDAARIRVGSAEVRKEVDRIREQYGLRDKKAYEQFLNQIGYTD 134 Query: 136 QYLAIQSIWPDVVKND---FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 L + ++ E+ + + E ++ + D K+ Sbjct: 135 AQLRAEIKAQLQIQKRLEQVRSSAKPTPEEVRFYFEVHQEDYKTEPRVQARQIVVDDKKV 194 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF------ 246 + + + +K++ + G Sbjct: 195 AEEVLAKAK---------AGEDFTALAKKYSK-VGAEQGGALGAAPGESAPKPVTKVVFP 244 Query: 247 ----QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKH 300 + + P + + + +K + K Sbjct: 245 EKVAEAVFALKGPGLVGPIEAGGRYYIVKVEAYLPPKVPTFEEVKDQVEKDAGDAKANGA 304 Query: 301 EAEYVKKLRSNAIIHY 316 Y++ LR A + + Sbjct: 305 LEAYLEDLRKKAQVRF 320 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 31/280 (11%), Positives = 70/280 (25%), Gaps = 39/280 (13%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 + T+N I + + + + L + + EL V+ T + Sbjct: 330 NPAVATVNEREILLSQV---LQPVFSNQQTAALIQQGLGELAVQFFL-------PQTLER 379 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 V A+ +G + ++ Sbjct: 380 LVDQEILVGAAKKSG------------------KPFIGSKDEVAQAYLLYE--TRDVTAT 419 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 E E + V + K ++A L Sbjct: 420 EAEARRFYAENPAFFTIPASAEVVGVVFQE------EAKAKAFREAALKASDLQALAKAH 473 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG-VEYIAICDKRDL 278 ++ V+ G+ +L+ + + K S + + G + I +++ Sbjct: 474 GGTVTEYGAVNPGQLPAVLDRLVFKVKEAFPKGSLGEVSEVVKLEDGTFTVLLIKNRKPE 533 Query: 279 --GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A+K K ++ ++KLR A + Sbjct: 534 ELKPFEAVKEEALEGVINRKRQEKAQALIQKLRQEAKVEN 573 >gi|53805225|ref|YP_113052.1| peptidyl-prolyl cis-trans isomerse D [Methylococcus capsulatus str. Bath] gi|53758986|gb|AAU93277.1| peptidyl-prolyl cis-trans isomerse D [Methylococcus capsulatus str. Bath] Length = 605 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 77/254 (30%), Gaps = 6/254 (2%) Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 Q L + + + ++ ++ + FV SS + Sbjct: 129 QVKRALLMEQFQRGITDTAFVTRQQVEAFFRLKNQEREIEFVTVPLAKADEEVSESSIDE 188 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR--TV 183 + F+ + + + +D + E E+ ++ K E + + Sbjct: 189 YYRSHPDEFQSPETVSVNYLLLSLDDVAKEVKPTEEELRNFYEEQKAGFTTEERRKVSHI 248 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDL 242 L ++ K +++ +I+ E L+ ++ + + G + + + Sbjct: 249 LVTVDPAKPEDEAAALAKIRQIRERLLKGEDFAKLAKETSDDRVSAEKGGDLGVVTKGGM 308 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEK 299 P F+ SQ + P T G I + + +K ++A E Sbjct: 309 EPNFEKAALALSQGEVSEPVRTSFGYHLIKVTELTPATTKPYEQVKDEVAAGFRRNAAEN 368 Query: 300 HEAEYVKKLRSNAI 313 + +KL A Sbjct: 369 RFYDLGQKLTEFAF 382 >gi|42781422|ref|NP_978669.1| peptidylprolyl isomerase [Bacillus cereus ATCC 10987] gi|42737344|gb|AAS41277.1| protein export protein prsA [Bacillus cereus ATCC 10987] Length = 283 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 32/309 (10%), Positives = 89/309 (28%), Gaps = 48/309 (15%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + II C+V +S + + + + + +T+ ++SK + + Sbjct: 1 MKKKKLFLGTIISCVVLALSACG-SSGNVVTSKVGN--VTEKELSKELR--------QKY 49 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + ++++ + + S + S+ ++ Sbjct: 50 GESTLYQMVLSKALLDKYKVSDEEAKKQVEE-------AKDKMGDNFKSTLEQVGLKNED 102 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K+ + + + +K K + + Sbjct: 103 ELKEKMKPEIAFEKAIKATVTEKDVKDNYKPELKVSHILVKD------------------ 144 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ +E ++++ G+ +F+ Sbjct: 145 ------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEIAGFAPGQTVKEFEEAAY 198 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306 K ++P T G I + DK++L +K + +++ ++ V Sbjct: 199 KLDAGQVSDPVKTTYGYHIIKVTDKKELKPFDEVKDDIRKDLEQQRLQDTTGKWKQQVVN 258 Query: 307 KLRSNAIIH 315 L +A I Sbjct: 259 DLLKDADIK 267 >gi|118477742|ref|YP_894893.1| peptidylprolyl isomerase [Bacillus thuringiensis str. Al Hakam] gi|118416967|gb|ABK85386.1| protein export protein [Bacillus thuringiensis str. Al Hakam] Length = 298 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 29/312 (9%), Positives = 85/312 (27%), Gaps = 48/312 (15%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKIN 69 + +L L +++ + S + T + IT+ ++SK + Sbjct: 12 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--ITEKELSKELR-------- 61 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + + + ++++ + + S + S+ Sbjct: 62 QKYGESTLYQMVLSKALLDKYKVSDEEAKKQVEE-------AKDKMGDNFKSTLEQVGLK 114 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 ++ K+ + + + + K + + Sbjct: 115 NEDELKEKMKPEIAFEKAITATVTEKDVKDNYKPEMKVSHILVKD--------------- 159 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN 248 +K K+ +E ++++ G+ +F+ Sbjct: 160 ---------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEE 210 Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY--- 304 K + P T G I + +K++L +K + +++ ++ Sbjct: 211 AAYKLDAGQVSEPVKTTYGYHIIKVTNKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQ 270 Query: 305 -VKKLRSNAIIH 315 V +L +A I Sbjct: 271 VVNELLKDADIK 282 >gi|149910316|ref|ZP_01898960.1| peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D) [Moritella sp. PE36] gi|149806676|gb|EDM66643.1| peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D) [Moritella sp. PE36] Length = 636 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 40/409 (9%), Positives = 100/409 (24%), Gaps = 97/409 (23%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K + V++ F + + SY + T+NG I+ + ++ Sbjct: 1 MLEKFREGSQGPGAKIILGAVIVTFALAGVSSYLGGGSNQS-AATVNGVDISTQALENQV 59 Query: 61 ALLKLQKI----------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + ++ + ++ LI + L +Q ++ + Sbjct: 60 RTDRSRLESQQGESFAVRWEQPEFQNQVRQQSLNTLIAQNLLQQMTNDLALSIGDEKIRG 119 Query: 105 FFVQHARNTG---LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 + + E + S L + G+ F + L + + Sbjct: 120 YIFAMQEFQTDGVFNDERYISLLRQNGMTPAQFVERLRVDFAQQQLTDALVNSEFSLPNE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 F + E+ + + K + Sbjct: 180 VKQLAALQNQQRELSQLIVPANKFAADIVVTDAEVNSYYEDSKAFFQTPQQASVDYILVD 239 Query: 189 DNKLQNQGFVQKRIKDAEESRL-----------------RLPKDCNKLEKFASKI----- 226 + + + + D + ++ A + Sbjct: 240 MKNISAGIELDADAAENYYNEHLSSYTQEDKRKVAHILVAFNDDESAAQEKAQDLLTQIQ 299 Query: 227 -----------------HDVSIGKAQYLLESDLHPQFQNLLKKSQNN---TTNPYVTQKG 266 + G+ +L + + P F+ QN+ TT + G Sbjct: 300 SGADFAELAKTSSDDTFSGENGGELDWLEKDIMDPAFETAAFALQNDGDVTTELVRSDFG 359 Query: 267 VEYIAIC--DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 I + + + +K + + + H E + L A Sbjct: 360 FHIIKLLAVESGKVKAFTDVKTTIETRLKNEQAVSHFDELAETLAEQAF 408 >gi|289642554|ref|ZP_06474697.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Frankia symbiont of Datisca glomerata] gi|289507642|gb|EFD28598.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Frankia symbiont of Datisca glomerata] Length = 391 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 29/313 (9%), Positives = 75/313 (23%), Gaps = 27/313 (8%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK---------ING 70 + IVP+V+ + R + G V+T + R+ +L Sbjct: 26 IAGLALLIVPLVTGLPGNAAFR----VGGTVVTKDQLHDRVEVLSALYGIREPVGGSELE 81 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + + + + V + + I + + S +D Sbjct: 82 QFRRDIAKAVAVSKILDNAASERKIVIADKSARDTLTKMIDEQMGSGQDGQRAFTDLLAK 141 Query: 131 DNHFKQYLAIQSIWPDV---VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + + + + + + + + L +I Sbjct: 142 LKVSENDVLDEVGRQQRTARLFQEVTAPAVATVTDDQLPSYYESHRADFAVPAQRHLRNI 201 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI-GKAQYLLESDLHPQF 246 + V +R + + S G ++ S L ++ Sbjct: 202 VVATREEADQVVRR-------ARDGADFAALAGETSLDESTRSSQGDLGFVTASQLDAEY 254 Query: 247 -QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAE 303 + + P T+ G + + R +K + + Sbjct: 255 AKAAFAVPVGSVFGPVQTRYGWNVGQVLEDRPASQPSFEQVKDQVRDALRSERAVATWRT 314 Query: 304 YVKKLRSNAIIHY 316 ++ A + Y Sbjct: 315 WLADRIRAADVEY 327 >gi|206967650|ref|ZP_03228606.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus AH1134] gi|206736570|gb|EDZ53717.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus AH1134] Length = 289 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 91/304 (29%), Gaps = 42/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + ++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYDQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKDVDKKFD--------EMKKQYGDQFDTLLKQQGIKEETIK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q V+ K + E + K +I V++ Sbjct: 104 TGVRAQLAQEKAVEQSITDKDVKAKFEDYKKEIKASHILVKD------------------ 145 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 ++ K ++ + ++++ G + + +F+ +K Sbjct: 146 ---EETAKKVKDELAQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEEAAQKLK 202 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRSN 311 + + P TQ G I + D K + K + + + + K Sbjct: 203 KGEVSEPVKTQFGYHIIKVTDNHADANFDKAKTDIKKSLVQEKTQDAQFMNDLMMKEIKK 262 Query: 312 AIIH 315 A + Sbjct: 263 ADVK 266 >gi|198244647|ref|YP_002214406.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197939163|gb|ACH76496.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 623 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 41/396 (10%), Positives = 101/396 (25%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S+ +NG+ I+ Sbjct: 1 MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYL-IGGSNNYAAKVNGQGISRAQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEK------------ 92 + + L + + LI E L Q + Sbjct: 60 NNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQ 119 Query: 93 -----SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI---- 143 D N + G++A+ ++ L Q + Sbjct: 120 AIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179 Query: 144 ---------WPDVVKNDFML------KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 VV+ + K + E+ + + K + R + Sbjct: 180 TDELAALVSQQRVVREAVIDVNALAAKQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEE-----------------------------SRLRLPKDCNKL 219 +Q ++ + + Sbjct: 240 AATMQAPVSDADIQAYYDQHVDQFTQPERIRYSIIQTKTEDDAKAVLDALNKGEDFATLA 299 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ ++ I + G +L ES P+ +N K + + + G + D + Sbjct: 300 KEKSTDIISARNGGDMGWLEESATVPELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPA 359 Query: 279 GGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++ ++A+ K +K+ A Sbjct: 360 KVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAA 395 >gi|251791833|ref|YP_003006553.1| peptidyl-prolyl cis-trans isomerase D [Aggregatibacter aphrophilus NJ8700] gi|247533220|gb|ACS96466.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Aggregatibacter aphrophilus NJ8700] Length = 615 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 41/392 (10%), Positives = 92/392 (23%), Gaps = 81/392 (20%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 K+ + +++ F+ + F I + Y + +NGE I+ + Sbjct: 3 MEKLNGASNNWASKFLFGFISVTFVISSMAGYLYTRTDNS-AAKVNGEEISQHAFQNQYN 61 Query: 62 LLKLQKING---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQH 109 + L++ + LI + L +Q + + + Sbjct: 62 IASRNLSPQEADSPAQVANLKRQILSSLIDQELLRQYTNELKLGVSDERIKQEIVTSPNF 121 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-------------------- 149 N + L GI + Y+ + Sbjct: 122 QNNGKFDNALYQQVLQTNGISAETYASYVREALRLEQLQGGLAITAFSVPAQRDALAKLF 181 Query: 150 -------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL------------ 184 D + K + EI A K ++ Sbjct: 182 FQRRNIRLANLSLADEIAKQTVTDAEIQAYYDAHKADFTIPESVKVQYLDLSGANMEKNI 241 Query: 185 ---------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK---- 225 Q +Q + + + ++ A Sbjct: 242 NITDVEIAQYYQDNKAQFTTQGQQRLAHIQVKTEQQAQDLYNQLQNGAAFADLAKNHSID 301 Query: 226 -IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GE 281 G ++ + F++ + + P I + +++D G Sbjct: 302 PTSAEKGGDLSWVSAGEFPKVFEDAANALAVGQYSQPVKLDNNYHIILVKERKDAGVLPL 361 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA ++AQ I K++ A Sbjct: 362 ENVKAQIAAQIRQNLINNQFFSVEKRVAEKAF 393 >gi|307718672|ref|YP_003874204.1| basic membrane protein [Spirochaeta thermophila DSM 6192] gi|306532397|gb|ADN01931.1| basic membrane protein [Spirochaeta thermophila DSM 6192] Length = 346 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 49/341 (14%), Positives = 112/341 (32%), Gaps = 37/341 (10%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 ++L +++ + P A +R++ T EVIT + LL+ Q Sbjct: 1 MRLWKIVLGVVVMGLFPAFGQIIDAPVARVKLT-KLEVITQRQFKADVELLEKQLGRELS 59 Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN---TGLSAEDFSSFLDK 126 E K + I E L Q E+ ++ ++ Q+ ++ E + Sbjct: 60 LEERKQLLDARIGEILIYQAAEREYLSVTQEELSQAIAQYKQSVAPNVSDQEFQRLIESQ 119 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG----NLEMEIPANKQKMKNITVREYLIRT 182 G+ F++ + + I + + E EI + + ++R Sbjct: 120 GGMTWEQFQEQMKKRLIAEKYLYQKKGQEIQNVPAPSEEEIRRVYNENISNFTAPEMVRY 179 Query: 183 VLFSIPD---NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLL 238 I + + + + ++ +E L K +EK++ G YLL Sbjct: 180 SHIFIDTRGLSDEEKKKAYNRALQVKKEVDGSLAKFREAVEKYSDDQASRYQGGDVGYLL 239 Query: 239 ESDLH-------PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL-----------GG 280 +D F + N ++ + G + + + + Sbjct: 240 RTDKQRESFLGKEFFSKIFSLPLNKVSDVLASNVGYHIVVVTEHHEPRLLGLDDRLLPNS 299 Query: 281 EIALKAYLSAQNTPTKIEKHEAE----YVKKLRSNAIIHYY 317 + ++ ++A K ++ + +++LRS A + Y Sbjct: 300 KQTVRDQITALLVGQKRQEAYQKALQKLIEELRSQADVSIY 340 >gi|254520547|ref|ZP_05132603.1| ppic-type ppiase domain-containing protein [Clostridium sp. 7_2_43FAA] gi|226914296|gb|EEH99497.1| ppic-type ppiase domain-containing protein [Clostridium sp. 7_2_43FAA] Length = 248 Score = 77.4 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 80/277 (28%), Gaps = 38/277 (13%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 M +I TI G+ I + D+ I K A ++L+ + + + I G Sbjct: 1 MEDKILVTIAGKEIKESDLQNMIMKYPADKRAYFETVEAKKQLLEQMVSFELINMLGKEL 60 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + + A I + N +L+ Sbjct: 61 NIQDTEEY---------------------------KENVRQAENDILTQLTLNKLLLEVT 93 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + + K ++ + + +L ++ + + Sbjct: 94 VTDEDALNYYNNNKGEFTQQPTVSAKHILVDSKELCDKIKSE--------IDSKELTFEE 145 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276 K+++ G + P+F++ K N + P TQ G I + DK Sbjct: 146 AAMKYSTCPSKEEGGNLGAFGRGMMVPEFEDEAFKLDINVVSEPVKTQFGYHLIKVEDKN 205 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + +KA + + ++ + VK+L Sbjct: 206 EGREMPFEEIKAQIVNKLLQEMQQRKYLDVVKELEKK 242 >gi|228985422|ref|ZP_04145581.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774375|gb|EEM22782.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 288 Score = 77.4 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 92/313 (29%), Gaps = 50/313 (15%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKIN 69 + +L L +++ + S + T + +T+ ++SK L+ + Sbjct: 2 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQKYGE 56 Query: 70 GELEKIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 L ++ + + L+ + E K + + + F GL ED Sbjct: 57 STLYQMVLSKALLDKYKVSDEEAKKKVEEAKDKMGENFKATLEQLGLKNED--------- 107 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K+ + + + +K K + + Sbjct: 108 ----ELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD-------------- 149 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQ 247 +K K+ +E ++++ G+ +F+ Sbjct: 150 ----------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFE 199 Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY-- 304 K + P T G I + DK++L +K + ++++ ++ Sbjct: 200 EAAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQETTGKWKQ 259 Query: 305 --VKKLRSNAIIH 315 V +L +A I Sbjct: 260 QVVNELLKDADIK 272 >gi|315634906|ref|ZP_07890188.1| peptidyl-prolyl cis-trans isomerase [Aggregatibacter segnis ATCC 33393] gi|315476458|gb|EFU67208.1| peptidyl-prolyl cis-trans isomerase [Aggregatibacter segnis ATCC 33393] Length = 615 Score = 77.4 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 34/392 (8%), Positives = 95/392 (24%), Gaps = 81/392 (20%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 K+ + +++ F+ + F I + Y + + +NGE I+ + Sbjct: 3 MEKLHGASTNWASKFLFGFITVTFVISSMAGYLYTRVDNS-AAKVNGEEISQQAFQNQYN 61 Query: 62 LLKLQKING---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQHA 110 + L++ + LI + L +Q + + + Sbjct: 62 IASRNLTPQEIDSPAQVANLKRQVLASLIDQELLRQYANELKLGVSDARIKQEIVTTPTF 121 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK--------------------- 149 +N G + +++ + ++ Sbjct: 122 QNNGKFDNTLYQQTLQNNGISAETYAGYVREALRLEQLQSGLGTTTFSVPAQQEKLTKLF 181 Query: 150 -------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL------------ 184 + + K + EI A K ++ Sbjct: 182 FQSRQIRLANLSLANEIAKQEVSDEEIQAYYDAHKAEFTIPETVKVQYLDLSGAAMENNI 241 Query: 185 ---------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK---- 225 Q +Q + + + + ++ A Sbjct: 242 NITDVEIAQYYQDNKPQFTTQGQQRLAHIQVKTEQQAQELYQQLQNGANFADLAKNHSID 301 Query: 226 -IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL--GGE 281 G ++ + F++ + + P I + ++++ Sbjct: 302 PTSAERGGDLSWVSAGEFPKVFEDAANALAVGQYSQPVNLDNHYHIILVEERKEPQLQPL 361 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++KA ++AQ + K++ A Sbjct: 362 ESVKAQIAAQIRQNLVNTQFYSIEKRVAEKAF 393 >gi|264677817|ref|YP_003277723.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas testosteroni CNB-2] gi|262208329|gb|ACY32427.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas testosteroni CNB-2] Length = 632 Score = 77.4 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 23/203 (11%), Positives = 49/203 (24%), Gaps = 8/203 (3%) Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 G + N FKQ A + + E ++ ++ Sbjct: 201 AFAGKVQPTEAELKAFYEAHTNQFKQPEAATVEYVQLDLAAVQQGIVLSEDDLRTYYKEN 260 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH--- 227 R I K +K AE+ ++ KD + A Sbjct: 261 AARLAGPEERRASHILINAAKDLPAAEREKAKAKAEQLLAQVRKDPKSFAQVAKANSQDP 320 Query: 228 --DVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 + G Y + F+ K Q + ++ + G I + + Sbjct: 321 GSAANGGDLGYFGREAMVKPFEEAVFKMKQGDISDVVESDFGFHIIELTGIKQPKV--PS 378 Query: 285 KAYLSAQNTPTKIEKHEAEYVKK 307 + + ++ + Sbjct: 379 FEEMRPKLEADLKQQQAQRKFAE 401 >gi|332885976|gb|EGK06220.1| hypothetical protein HMPREF9456_00094 [Dysgonomonas mossii DSM 22836] Length = 460 Score = 77.4 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 96/272 (35%), Gaps = 16/272 (5%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISK-RIALL-KLQKINGELEKIAVQELIVETLKKQEI 90 Y + I + E I D+ K R+ +L + ++I G+ + ++L V+ L + Sbjct: 21 YAQNNVIDEIIWVVGDEAILKSDVEKVRLGMLSRGERIEGDPYCLIPEQLAVQKLFLDQA 80 Query: 91 EKSGITFDSNTVNYFFVQH----ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 + I ++ VN ++ N G + + +++ + + + + Sbjct: 81 KIDSIEVPASAVNSQLSRYENNVIANLGSKEKAEEYLGSTMSQLRDEWREQIRNEYLVSE 140 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V K+ K E+ ++ ++ + I + + + + Sbjct: 141 VKKSLVGKKTNLTPSEVRKYYAQLPKDSLPYIPTMVEVQIITNEPVIPLKDIDQVKDRLR 200 Query: 207 ESRLRL----PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTN 259 + R+ ++ + G+ ++ ++L P+F ++ +N Sbjct: 201 DYTNRINSGTADFATLAIMYSEDPGSAPNGGELGFMGRAELLPEFSSVGFSLSDPKKVSN 260 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 T+ G I + ++R G+ A ++ + Sbjct: 261 IVETEYGFHIIQLIERR---GDRANFRHILLR 289 >gi|332529107|ref|ZP_08405071.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hylemonella gracilis ATCC 19624] gi|332041330|gb|EGI77692.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hylemonella gracilis ATCC 19624] Length = 647 Score = 77.4 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 44/408 (10%), Positives = 90/408 (22%), Gaps = 106/408 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + ++ F +V I Y R+ + IT G+ Sbjct: 1 MFENLRKHNKILMA-VLVLLIVPSFVLVGIDGYTRMTQKDRVVAHVGKIEITQGEWDAAH 59 Query: 61 ------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 L + + ++ +I E + +Q + + + Sbjct: 60 RSETDRLRQMMPNLDARLLDSDAARRGVLERMIRERVLQQAALDAQLNVSDARLFQELQT 119 Query: 109 HA-------RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + E + + L +QG+ F+ L + Sbjct: 120 IPAISQLRNAQGKIDMEAYQALLARQGMSPAGFEAQLRADLAVNQIQSSVTGTAVQTNTS 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV----- 183 D+ + E ++ A Q + + R Sbjct: 180 ADLALDAWLERREVQVARFTPADYATRVQVSEADLQAYWQANQGLFQAPEQARIEYIVLD 239 Query: 184 -----------------------------------LFSIPDNKLQNQGFVQKRIKDAEES 208 I K QK + A+ Sbjct: 240 IDALRKEARVNEEDLRNYYEQNVDRLSGPEERRASHILITAAKDAPAAERQKAREQAQAL 299 Query: 209 RLRLPKDCNKL---------EKFASKI-HDVSIGKAQYLLESDLH-PQFQNLLKKSQNNT 257 L K K + G Y + P + Q Sbjct: 300 LAELRKAPANAQAKLFAELARKHSQDPGSASRGGDLGYFGRKAMTLPFEEAAFALKQGEL 359 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAE 303 ++ T G I + + + L+ L A+ + + AE Sbjct: 360 SDVVETDFGYHVITVTGIKKPKAKTYAELRPSLEAEIRSQQAQTRYAE 407 >gi|269958291|ref|YP_003328078.1| hypothetical protein ACIS_00053 [Anaplasma centrale str. Israel] gi|269848120|gb|ACZ48764.1| hypothetical protein ACIS_00053 [Anaplasma centrale str. Israel] Length = 403 Score = 77.4 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 91/280 (32%), Gaps = 14/280 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA---LLKLQKINGEL 72 + Y V V +VS+ +A S RI+ ++G+ IT D+S+R G Sbjct: 1 MLRYLVYCCTLCVVLVSHNCYASSVRIKAVVDGKAITSLDVSRRAQANAFFYKTAHAGSD 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 +Q L+ E++ + E ++ G++ + + + G+ E Q D Sbjct: 61 RNEVLQSLVDESMLELEAKELGMSVSKHELEAEAGKLFSVLGVCDELDIGECAAQNGLDY 120 Query: 133 HFKQYL-AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + IW ++ + ++ + K+ + L +F Sbjct: 121 KSVENHLRSRVIWSKMLAARVAPFLAVSDSDVENYVDEAKSAGLETVLDMEQVFVPFKAG 180 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + + K + ++ + +A + + L +L++ Sbjct: 181 RVLDSVLSELNKGV--ALDKIAARYREHAVYADRA-------VGVTASAFLPDVKASLVR 231 Query: 252 KSQNNTTNPYVTQKGVEYIAICDK-RDLGGEIALKAYLSA 290 P +G + + K + G + A + Sbjct: 232 AKVGQVIGPVRIDRGYLVLKLLSKVKVGKGFLNSSASIKR 271 >gi|254715206|ref|ZP_05177017.1| Chaperone surA precursor [Brucella ceti M13/05/1] gi|261216924|ref|ZP_05931205.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti M13/05/1] gi|260922013|gb|EEX88581.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti M13/05/1] Length = 311 Score = 77.4 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 30/280 (10%), Positives = 78/280 (27%), Gaps = 40/280 (14%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG I + DI + L A + E L ++ Sbjct: 51 AVSVNGVTIDEADILTEAQNHPAENPGAALFSAARALAVRELLLQRAR------------ 98 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 ++ + D + ++ V++ + + E Sbjct: 99 ------------------EIGIEPEHEKDAEGRAETDEDALVRMVIEREVDV-PSASRDE 139 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220 + ++ ++ I + + R + + + Sbjct: 140 AQRYYENNRHRFTSAPILEASHILIAADPADQETRDAARQTATRLAAAVIAEPATFASVA 199 Query: 221 -KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN--PYVTQKGVEYIAICDKR- 276 +++S G L P+F+ L++ T P ++ G + + D+R Sbjct: 200 LEYSSCPSGAQGGNLGQLTRGSTVPEFERALERMTPGETTANPIESRFGYHIVRL-DRRV 258 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ + K ++Y+ L + A I Sbjct: 259 EGEELPFDYVADKIAGWLEASTWSKAVSQYIAILAAEAEI 298 >gi|157369342|ref|YP_001477331.1| peptidyl-prolyl cis-trans isomerase D [Serratia proteamaculans 568] gi|157321106|gb|ABV40203.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Serratia proteamaculans 568] Length = 627 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 40/399 (10%), Positives = 103/399 (25%), Gaps = 88/399 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + + +++ F + +VSY+ A +NG+VI + + Sbjct: 1 MMDNLRAAANHVVLKIILGLIILSFLLTGVVSYQGSAG--DYAAKVNGQVIERAQLEQAF 58 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + ++ A+ +LI L Q +K G++ + V Sbjct: 59 QSERSRMQQQLGDQFSALAGNEGYMQQMRHQALSQLIDNMLLDQYAKKLGLSVSDDQVKE 118 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 N + + + G ++F Q + Q + V++ Sbjct: 119 AIRKAPYFQTNGQFDNAKYLDLISRMGYTADNFAQSMRQQLVNQQVIQAFGGSGFILPAE 178 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI- 187 K + E+ + KN + ++ + Sbjct: 179 AQDMTALVLQQRDVRLATLDLKALQAKQTVTDDELKDYYSQNKNSFIAPEQVKVSYIPMD 238 Query: 188 ------------------------------PDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 N Q + + + Sbjct: 239 AAAMQDKVTVADADISAYYDQHKSSYGQPERKNYSVIQLKTEAEANAVLDELKKGGDFAT 298 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK- 275 + ++ I + G+ +L + + + + + G I + D Sbjct: 299 LAKDKSTDIISRRTGGELGWLEPDTTADELKQANLTEKGQLSGVVKSSVGYLVIRLNDIA 358 Query: 276 -RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ ++ Q K +K+ A Sbjct: 359 PEKVKPLSEVRDAIAKQVKQEKAVDAYYALQQKVSEAAT 397 >gi|229155916|ref|ZP_04284017.1| Foldase protein prsA 1 [Bacillus cereus ATCC 4342] gi|228627523|gb|EEK84249.1| Foldase protein prsA 1 [Bacillus cereus ATCC 4342] Length = 288 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 92/313 (29%), Gaps = 50/313 (15%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKIN 69 + +L L +++ + S + T + +T+ ++SK L+ + Sbjct: 2 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQKYGE 56 Query: 70 GELEKIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 L ++ + + L+ + E K + + + F GL ED Sbjct: 57 STLYQMVLSKALLDKYKVSDEEAKKKVEEAKDKMGENFKATLEQLGLKNED--------- 107 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K+ + + + +K K + + Sbjct: 108 ----ELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD-------------- 149 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQ 247 +K K+ +E ++++ G+ +F+ Sbjct: 150 ----------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFE 199 Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY-- 304 K + P T G I + DK++L +K + ++++ ++ Sbjct: 200 EAAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQETTGKWKQ 259 Query: 305 --VKKLRSNAIIH 315 V +L +A I Sbjct: 260 QVVNELLKDADIK 272 >gi|34498389|ref|NP_902604.1| peptidyl-prolyl cis-trans isomerase [Chromobacterium violaceum ATCC 12472] gi|34104243|gb|AAQ60602.1| probable peptidyl-prolyl cis-trans isomerase [Chromobacterium violaceum ATCC 12472] Length = 242 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 82/278 (29%), Gaps = 47/278 (16%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 T+NG I++ I+ ++ A+Q+LI+ TL Q+ + G+ Sbjct: 3 ITVNGVEISEDMIASQLDHY---ADTPSPRDTAIQQLILHTLLIQQAKSEGLDVADE--- 56 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 Q ++ + + + Sbjct: 57 -------------------------------------QQAIQTLLDSKLQVPAIDEASCR 79 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + + E + + + L+ K EE++ + ++ + Sbjct: 80 EFYDRYPERFSAGESAVASHILLPKGEGLEASLIKAKAEGILEEAQANPSRFAALAQEHS 139 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKRDLG-- 279 + G + P+F+ + ++ P TQ G I + + + G Sbjct: 140 TCPSGKQGGSLGQFGRGQMVPEFEQAVFSTEAGQITPHLVETQFGYHIIQVEQRAEGGKI 199 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G +K L + + EY+ L S A I Y Sbjct: 200 GFDEVKERLQHYLADLAVNQAMHEYLNMLVSAAQISGY 237 >gi|229139028|ref|ZP_04267605.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST26] gi|228644383|gb|EEL00638.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST26] Length = 288 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 91/313 (29%), Gaps = 50/313 (15%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKIN 69 + +L L +++ + S + T + +T+ ++SK L+ + Sbjct: 2 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQKYGE 56 Query: 70 GELEKIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 L ++ + + L+ + E K + + + F GL ED Sbjct: 57 STLYQMVLSKALLDKYKVSDEEAKKQVEEAKDKMGDNFKSTLEQLGLKNED--------- 107 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K+ + + + +K K + + Sbjct: 108 ----ELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD-------------- 149 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQ 247 +K K+ +E ++++ G+ +F+ Sbjct: 150 ----------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEIAGFAPGQTVKEFE 199 Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY-- 304 K + P T G I + DK++L +K + +++ ++ Sbjct: 200 EAAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQ 259 Query: 305 --VKKLRSNAIIH 315 V +L +A I Sbjct: 260 QVVNELLKDADIK 272 >gi|222095920|ref|YP_002529977.1| peptidylprolyl isomerase [Bacillus cereus Q1] gi|221239978|gb|ACM12688.1| protein export protein prsa [Bacillus cereus Q1] Length = 283 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 88/309 (28%), Gaps = 50/309 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 + L +++ + S + T + +T+ ++SK L+ + L Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQKYGESTLY 55 Query: 74 KIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + + L+ + E K + + + F GL ED Sbjct: 56 QMVLSKALLDKYKVSDEEAKKQVEEAKDKMGDNFKSTLEQLGLKNED------------- 102 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K+ + + + +K K + + Sbjct: 103 ELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD------------------ 144 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ +E ++++ G+ +F+ Sbjct: 145 ------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEIAGFAPGQTVKEFEEAAY 198 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306 K + P T G I + DK++L +K + +++ ++ V Sbjct: 199 KLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQVVN 258 Query: 307 KLRSNAIIH 315 L +A I Sbjct: 259 GLLKDADIK 267 >gi|34498008|ref|NP_902223.1| peptidyl-prolyl cis-trans isomerase [Chromobacterium violaceum ATCC 12472] gi|34103863|gb|AAQ60223.1| probable peptidyl-prolyl cis-trans isomerase [Chromobacterium violaceum ATCC 12472] Length = 612 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 45/385 (11%), Positives = 93/385 (24%), Gaps = 86/385 (22%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 + + + V + F + SY S A + I D+ + L+ Q + Sbjct: 8 NKTVIQVILGAVALTFVGFGVGSYSS-ATDDPYLVKVGKTKIYKRDLDRA---LEGQPSD 63 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDK 126 + A++ LI + L E G + + N SA+ +S FL Sbjct: 64 PATRQAALENLIRQELLLAEARDHGAAVSPDQLRKAIASIPAFQENGQFSAQRYSEFLKS 123 Query: 127 QGIGDNHFKQYLAIQSIWPDVVK---------------------------------NDFM 153 + F+ ++ + + +DF Sbjct: 124 RYPNPEAFEADISRDILLQSQLSSVAGTQFVSNTVVTRVAGLLGEGRELQPLVLKPSDFA 183 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRT-------------------VLFSIPDNKLQN 194 + I A ++ + D + Sbjct: 184 SEVKTDAAAIKAYYDANAKRFSLPEQVKLDYVVLSQDALAQGIKVSDAEVQKYYDQHKAD 243 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLE--------------------KFASKIHDVSI--- 231 Q+R + + K K + + A Sbjct: 244 LAGEQRRASHILLTVAKDAKPEQKAKVKAEAEAILKEVRVNPAKFAELAKAKSQDPGSAE 303 Query: 232 --GKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 G + + F + + K ++ T+ G I + + + +K + Sbjct: 304 KGGDLGFFGHGMMVKPFDDAVFKMKPGQISDLVETEYGFHIIRLDAVKSQSLD-DVKGAV 362 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAI 313 + K E KL A Sbjct: 363 VDKLQKQKAAALFHEQAGKLNEIAY 387 >gi|229068702|ref|ZP_04202000.1| Foldase protein prsA 1 [Bacillus cereus F65185] gi|229078350|ref|ZP_04210914.1| Foldase protein prsA 1 [Bacillus cereus Rock4-2] gi|229177575|ref|ZP_04304953.1| Foldase protein prsA 1 [Bacillus cereus 172560W] gi|228605937|gb|EEK63380.1| Foldase protein prsA 1 [Bacillus cereus 172560W] gi|228705025|gb|EEL57447.1| Foldase protein prsA 1 [Bacillus cereus Rock4-2] gi|228714449|gb|EEL66326.1| Foldase protein prsA 1 [Bacillus cereus F65185] Length = 289 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 92/304 (30%), Gaps = 42/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + ++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYDQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + + +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKDVDKKFD--------EMKKQYGDQFDTLMKQQGIKEETIK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q V+ K + E + K +I V++ Sbjct: 104 NSVRAQLAQEKAVEQSITDKDVKAKFEDYKKEIKASHILVKD------------------ 145 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 ++ K ++ + ++++ G + + +F+ +K Sbjct: 146 ---EETAKKVKDELAQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEEAAQKLK 202 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRSN 311 + + P TQ G I + D KA + K + + + + K Sbjct: 203 KGEVSEPVKTQFGYHIIKVTDNHADANFDKAKADIKKSLVQEKTQDAQFMNDLMMKEIKK 262 Query: 312 AIIH 315 A + Sbjct: 263 ADVK 266 >gi|150389495|ref|YP_001319544.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkaliphilus metalliredigens QYMF] gi|149949357|gb|ABR47885.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkaliphilus metalliredigens QYMF] Length = 249 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 28/277 (10%), Positives = 74/277 (26%), Gaps = 39/277 (14%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 + + + IT D+ + L Q + + L+ E + ++ + Sbjct: 5 NVLAVVGEKNITKQDVEALMKTLDPQMAMQLQSEDGQKRLVNELVNQELFYLLAKEENLE 64 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + +++ N + + Sbjct: 65 KEDA---------------------------YQADLEKMKENLLKQYAINKLLRDITITD 97 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 EI + K + ++ + + + + Sbjct: 98 SEITNYYTENKAQFEQPAQVQASHILVDSEEKAQGVLAELK---------EGLSFEEAAT 148 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 K +S + G + + P+F+ + + P TQ G I + D++ Sbjct: 149 KHSSCPSNAKGGDLGLFAQGQMVPEFEEAAFNMEVDTVSEPVKTQFGYHIIKVVDQKPAQ 208 Query: 280 GEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + +K L+ Q K +K + ++ L+ + Sbjct: 209 EKSLAEVKDQLNQQLLSQKQQKAYFDKIEALKGQFTV 245 >gi|71065176|ref|YP_263903.1| peptidyl-prolyl cis-trans isomerase [Psychrobacter arcticus 273-4] gi|71038161|gb|AAZ18469.1| possible peptidyl-prolyl cis-trans isomerase [Psychrobacter arcticus 273-4] Length = 343 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 32/269 (11%), Positives = 74/269 (27%), Gaps = 9/269 (3%) Query: 56 ISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 I K +A + N L+ + + + + V A Sbjct: 61 IEKAMAEERSNHKNLIASSRDELPSVLVNGVMIDRTAIAQELQYHPAENKEDAVFLATQA 120 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 + E + ++I + KN N E + + Sbjct: 121 LVVRELLRLAVLSDSSLGESAWDEDEEKAISSLIDKNVKATTPNNAICERYYEQNITDFM 180 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL----RLPKDCNKLEKFASKIHDV 229 T R +L + + ++K D E + ++ Sbjct: 181 TDPIMSARHILLACLPEDGDERLKLKKTAYDLIEQINADSNSTAALIELARQHSACPSKE 240 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRD--LGGEIALKA 286 G + + P+F++ L K + P ++ G + + +K+ + A Sbjct: 241 QGGDLGVISKGQTVPEFESTLFKLETGIAPSPIESRYGFHIVEVLNKQPGIQMNYEQVSA 300 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++ + + + +Y+ L A I Sbjct: 301 AIANKLSQQAFHQSLCDYLFTLTDEAEIQ 329 >gi|218848095|ref|YP_002454772.1| foldase protein PrsA [Bacillus cereus G9842] gi|218546226|gb|ACK98619.1| foldase protein PrsA [Bacillus cereus G9842] Length = 299 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 95/311 (30%), Gaps = 37/311 (11%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + +K L + + + S + I+ ++ R+ Sbjct: 1 MKSSVKRLIMTGLAVGSLTFVSGCSLFDSDSVEYAAKTDSGTISKDELYNRMV------- 53 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 ++ + + ++I T+ +++ + S D L +E +SF D Sbjct: 54 -DKIGQRTLDDMITLTVLQKKYKVSDGEIDDEIKR-----------LKSEFGNSFNDFLS 101 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + ++ L + + + + ++ A ++ IR + Sbjct: 102 QNGVNNEEQLKDVIKLDKLKQKLALEHLKIQDKDLKALY------EQKKPEIRVSHILVS 155 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQ 247 D L + + ++F+ G Y E D+ FQ Sbjct: 156 DETLAKDIKSK---------IDSGEDFGSLAKEFSQDIATKEKGGDIGYFKEGDMVQAFQ 206 Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH-EAEYV 305 + +K + P T G I + D++ L +K L ++ K+++ + Sbjct: 207 DAARKLKVGEVSQPVKTDFGYHVIKLLDEKKLPSFEQMKPQLQSELISNKMDQAKINAEI 266 Query: 306 KKLRSNAIIHY 316 +KL I Sbjct: 267 QKLLDKDNIKI 277 >gi|332283513|ref|YP_004415424.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pusillimonas sp. T7-7] gi|330427466|gb|AEC18800.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pusillimonas sp. T7-7] Length = 340 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 18/157 (11%), Positives = 51/157 (32%), Gaps = 5/157 (3%) Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD-AEESRLRLPKD 215 E++ K + T +Y + + P + ++K+ + +++R Sbjct: 163 SQEELQAAYEANKAQFTTPAQYRVSQIFLVAPYQDAEAVAKMRKQAGELVKKARADKADF 222 Query: 216 CNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC 273 +++ + G + L P+ + + + + P +Q G + + Sbjct: 223 AALVKEHSQDEATAARGGDTGWAPLQQLVPEIRTSVAALDKGAVSEPIQSQAGFHILKLV 282 Query: 274 DKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKL 308 D+R ++ L + Y++ L Sbjct: 283 DQRAPVTPELAQVQEQLREALRRQRKSTVAKAYLEGL 319 >gi|229017643|ref|ZP_04174536.1| Foldase protein prsA 1 [Bacillus cereus AH1273] gi|229023860|ref|ZP_04180344.1| Foldase protein prsA 1 [Bacillus cereus AH1272] gi|228737447|gb|EEL87958.1| Foldase protein prsA 1 [Bacillus cereus AH1272] gi|228743649|gb|EEL93756.1| Foldase protein prsA 1 [Bacillus cereus AH1273] Length = 276 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 39/137 (28%), Gaps = 6/137 (4%) Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLH 243 +K K+ +E ++++ G+ Sbjct: 124 HKPEMKVSHILVKDEKTAKEVKEKINNGEDFTTLAKQYSEDTGSKEQGGEIAGFAPGQTV 183 Query: 244 PQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 +F+ K + P T G I + DK++L +K + +++ Sbjct: 184 KEFEEAAYKLDAGQVSEPIKTSYGYHIIKVTDKKELKPFDEVKDTIRKDLEQQRLQDATG 243 Query: 303 EY----VKKLRSNAIIH 315 ++ + L A I Sbjct: 244 KWKQQVINDLLKEADIK 260 >gi|301632869|ref|XP_002945502.1| PREDICTED: peptidyl-prolyl cis-trans isomerase D-like [Xenopus (Silurana) tropicalis] Length = 638 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 19/239 (7%), Positives = 59/239 (24%), Gaps = 10/239 (4%) Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + ++ + K + + S + Sbjct: 225 QVLGGVLQSAFSTEGQFKLAMDALFQRREIQVARFNAQDFAGKVAPSDADLQTFYQSRTA 284 Query: 135 KQYLAIQSIWPDVVKND--FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ +V + E ++ Q+ + + R + + Sbjct: 285 HFQQPEEASVEYLVLDLDAVRAGITLSEDDLRTYYQENRERLAGKEERRASHILVNATQD 344 Query: 193 QNQGFVQKRIKDAEESRLRLPK----DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQ 247 + A+E ++ + +K + S G + + F+ Sbjct: 345 APAQERETAKARAQELLAQVRQNPGGFAGIAKKNSQDSGSAPSGGDLGFFARGAMVKPFE 404 Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAE 303 + + + ++ + G I + D + +A L A+ + + E Sbjct: 405 DAVFSMQKGDVSDVVESDFGYHIIQLTDVKTPQPPSFEQARAKLEAELKQQQAQSQFTE 463 >gi|77164285|ref|YP_342810.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus oceani ATCC 19707] gi|254434865|ref|ZP_05048373.1| PPIC-type PPIASE domain protein [Nitrosococcus oceani AFC27] gi|76882599|gb|ABA57280.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus oceani ATCC 19707] gi|207091198|gb|EDZ68469.1| PPIC-type PPIASE domain protein [Nitrosococcus oceani AFC27] Length = 304 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 25/301 (8%), Positives = 80/301 (26%), Gaps = 31/301 (10%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 ++I + S ++ + V+T D + + Q Sbjct: 12 ILILSALVAFSARAAEPEEEVLIQYKDVVVTPADFQAELETIPEQ--------------- 56 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 ++ + ++ + L+ E LD+ K Sbjct: 57 ---------YRANVAASGERIHQLLDKIFVYRVLAREAQEQGLDQNPEVQQELKLEKEEI 107 Query: 142 SIWPDVVKNDFMLKYGNLEME--IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + N + E Q + ++ I + + + Sbjct: 108 LGKARLRQLRQQALADNPDFETLARERYQANPEKYQQPERVKVSHILIKTEERSEEEAKK 167 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLK--KSQNN 256 K + + +++ + + G ++++ F+ + Sbjct: 168 LAEKVRQLALTEEKPFSELALEYSEDPSLEKNKGDLGFIVKGVTTKPFEEAAFALEQPGE 227 Query: 257 TTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + ++ G I + +++ +K L + T + + ++ ++R+ I Sbjct: 228 ISPVVKSRFGFHIIRLEERQAPKTKSFEEVKERLVEKIRETHLNQVVQTHLNQIRNAEGI 287 Query: 315 H 315 Sbjct: 288 Q 288 >gi|1480131|emb|CAA68024.1| nifM [Pantoea agglomerans] Length = 264 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 18/259 (6%), Positives = 66/259 (25%), Gaps = 17/259 (6%) Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 ++K++ L + + ++ + + Sbjct: 14 LAKQMKLSEELNPTPAQYQQFIEAW-----------QRQQVIEEAVAQAALEHALNIEPQ 62 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---FMLKYGNLEMEIPANKQKMKN 172 S E L + + +++ + + + Sbjct: 63 SVEVTRQALAAELPELELTATETEELLLHQTLLREQLNWVQQQAPQPDDAQVEAWYRGHA 122 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 R + + + ++ A R + +++ + G Sbjct: 123 QHFVRPEQRYTRHLLLTVEGNSPAVREQIDAIARRLRDGHALFARQALRYSHCPSAMGGG 182 Query: 233 KAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLS 289 ++ L+PQ ++ + ++P T+ G + R + + Sbjct: 183 VLGWVGRGILYPQLEDTLFRLEAGQLSSPVETELGWHLLLCEQIRLPQPLPKAEALTRVR 242 Query: 290 AQNTPTKIEKHEAEYVKKL 308 Q + ++ +++++L Sbjct: 243 QQLIARQQNHYQRQWLQQL 261 >gi|300703976|ref|YP_003745578.1| peptidyl-prolyl cis-trans isomerase (rotamase d) [Ralstonia solanacearum CFBP2957] gi|299071639|emb|CBJ42963.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Ralstonia solanacearum CFBP2957] Length = 649 Score = 77.0 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 32/282 (11%), Positives = 73/282 (25%), Gaps = 32/282 (11%) Query: 52 TDGDISKRIALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 T R+ + + + + K V LI +++E++ + Sbjct: 149 TPEQFDARVRSELVLQQIPQSIVASAFVPKSLVDRLIDARDQQREVQALLLKPADYVSKV 208 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 A A + +Q + D M + ++ Sbjct: 209 AVDDKAIQAYYDAHQQEFAVPEQVKAEYVVFS------------GEDMMKQIPVTPEQLK 256 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL----PKDCNKLE 220 + E R I K AEE + + Sbjct: 257 EYYDQNVARFKTEEQRRAAHILIKLPDNAKPADKDAAKKRAEEVLAEVRKAPGNFAELAK 316 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRD 277 K++ G+ +L + PQF++ L K + ++ + G I + + + Sbjct: 317 KYSGDPGSAAQGGELGFLAKGATVPQFESALFALKQPGDISDVVQSDFGFHIIKLEEVKG 376 Query: 278 ------LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + L+ + Q K + + + + Sbjct: 377 GGVQSLEAVKPELEREVRTQLANKKYTELADAFSNGVEDQSD 418 Score = 60.8 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 32/330 (9%), Positives = 88/330 (26%), Gaps = 38/330 (11%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M V T + L+ V F + Y + S + VIT ++ R+ Sbjct: 1 MLDFVRTH-RRLMFLVLLILVFPSFVFFGVQGYSRFMDGSHDAAKVGDAVITTSELDARV 59 Query: 61 -------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 Q ++ + + +I + + E ++ ++ + V Sbjct: 60 REQTERLRQMLGGQYDPRQFEGPQMRRDVLDGIIQQRVMANEASRTNLSIADSKVRETIE 119 Query: 108 Q-------HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 Q + + + L QG+ F + + + + ++ + Sbjct: 120 QIPAVAQLRKPDGKFDTDAYIKLLAAQGMTPEQFDARVRSELVLQQIPQSIVASAFVPKS 179 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + + L P + + K I+ ++ + +++ Sbjct: 180 LVDRLIDARDQQRE------VQALLLKPADYVSKVAVDDKAIQAYYDAHQQEFAVPEQVK 233 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLG 279 + K + L + + + + ++ I + D Sbjct: 234 AEYVVFSGEDMMKQIPVTPEQLKEYYDQNVARFKTE-----EQRRAAHILIKLPDNAKPA 288 Query: 280 GEIALKAYLSAQNTPTK-----IEKHEAEY 304 + A K + + +Y Sbjct: 289 DKDAAKKRAEEVLAEVRKAPGNFAELAKKY 318 >gi|238022941|ref|ZP_04603367.1| hypothetical protein GCWU000324_02862 [Kingella oralis ATCC 51147] gi|237865749|gb|EEP66887.1| hypothetical protein GCWU000324_02862 [Kingella oralis ATCC 51147] Length = 315 Score = 77.0 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 106/316 (33%), Gaps = 11/316 (3%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISKRIALLKLQKIN 69 +K T +L + + + + +RI +N VIT DI + + LK + Sbjct: 1 MMKRQITPLILSATLGIAFQAAYADTIKPLNRIAMEVNSSVITYRDIERTVRELKSRNAG 60 Query: 70 GELEKI-----AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + + A Q L+ L + + + ++ + A S E+ Sbjct: 61 QNIPEEQFVQAAKQRLLERALIADAARQQQLKATPSGIDEELKRRAAAENTSVENLYKKA 120 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFML-KYGNLEMEIPANKQKMKNITVREYLIRTV 183 G ++ +A + ++ + + ++ + Sbjct: 121 QANGYTREAYRLEVAKDVLADYLLSDLNNNVNISDAQINEALKSGAALPQGTPYPVYTIR 180 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 + N V+KR++ ++ + ++++ + V+ G + + L Sbjct: 181 RIILQAGNQANMSAVEKRMQQIAQAIQQGSDFATIAKRYSQEAEAVNGG-LHEVSDDMLP 239 Query: 244 PQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHE 301 + + + N T P + I + R ++ + Q + ++ Sbjct: 240 ENVEKLIHQMQPNQITAPQRVGTSWQIIQLVSSRTENDPAKMQREAVRRQLVQQARQANQ 299 Query: 302 AEYVKKLRSNAIIHYY 317 A++V++L+ NA++ Y Sbjct: 300 AQFVQQLQQNAVVREY 315 >gi|15603844|ref|NP_246918.1| hypothetical protein PM1979 [Pasteurella multocida subsp. multocida str. Pm70] gi|12722418|gb|AAK04063.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 626 Score = 77.0 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 36/400 (9%), Positives = 87/400 (21%), Gaps = 88/400 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + ++ + + F + I Y + INGE I+ +R Sbjct: 2 LIEKLHGMTNSWVSKFLLGLIAVAFVLSGITGY-VFTRVDTSAVKINGEEISQQTFYQRY 60 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + L + + LI + L +Q ++ I V Sbjct: 61 ESESERLRQQLGAQFAALSGSPEFVAGLRQSVLNNLINQELLRQYADELKIGISDERVKQ 120 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 + + L G+ + + + + Sbjct: 121 EIVTSQFFQQEGKFDNALYQRMLQLNGLTPDAYANIVREGLRLEQLQTGLAESEFIVPAQ 180 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + K + E+ A + K + L + ++ Sbjct: 181 QAQLTELFFQARTVRLAPFSLDQVLEKQTISDEEVSAYYEANKGAFLVPELAKVQYMTLT 240 Query: 189 DNKLQNQGFVQKRIKDAEESRLR-------------------------------LPKDCN 217 ++ V + Sbjct: 241 RADVEKHIQVSDVEIAQYYQDNKALYVSQGQQRLSHIQVATEAEAKEIYQALQDGANFAG 300 Query: 218 KLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 + KI + G + F+ + P I + ++ Sbjct: 301 LASARSLDKISAENGGDLSWASAGTFPKAFEEAANALQVGQFSQPVKVDDQFHIILVTER 360 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++ +K ++ Q + K+L A Sbjct: 361 KEPSTLPLEVVKTQIADQIRQNLVNNQYFSIEKQLAEKAF 400 >gi|88857634|ref|ZP_01132277.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudoalteromonas tunicata D2] gi|88820831|gb|EAR30643.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudoalteromonas tunicata D2] Length = 274 Score = 77.0 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 28/305 (9%), Positives = 82/305 (26%), Gaps = 36/305 (11%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K++ L+ I +++ S+ + +V+T +++ +L N L Sbjct: 1 MKIIIKKISLVTVLIGSVLTLGCSEPSNE-VAKVGEKVVTAQELANYFEFKRLDAKNTAL 59 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + A ++ + Q IE D F Sbjct: 60 VESAKKQYLNNLALVQAIESQTEYSDEKLAFELF-------------------------- 93 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + +M + + + + + + +L P + Sbjct: 94 ----EIKKDLLLNRYFNQYLEQVVTETDMRNYYAQNQEQYQSQQAKVSHILLRVNPADDE 149 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQN--L 249 + + +A + + + G+ ++ + F + Sbjct: 150 TTRQAKYSKAVEAYSKINTGSDFSVVAQSLSEDRVSAKKGGQLGWIKAGAIGATFSDTVF 209 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + P +T G I + ++ + + + + + +L+ Sbjct: 210 NQLKAGQVSEPILTDFGYHVILLE--QEPKTVKRSFESVQGNIKRSLRKAAKDAELARLQ 267 Query: 310 SNAII 314 S I Sbjct: 268 STVSI 272 >gi|299142782|ref|ZP_07035911.1| ppic-type ppiase domain-containing protein [Prevotella oris C735] gi|298575811|gb|EFI47688.1| ppic-type ppiase domain-containing protein [Prevotella oris C735] Length = 477 Score = 77.0 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 31/296 (10%), Positives = 78/296 (26%), Gaps = 37/296 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 V+I ++ S + + T+NG+ + + Sbjct: 7 VIISLAMLLCGSMAFSQSNDPVVMTVNGKPVLRSEFEYAYR------------------- 47 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + + + + L E + Sbjct: 48 ----------KNNSAGVIDRKSVAEYAELFIDYKLKVEAALAAQLDTLTSFQEEFAGCRD 97 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG-FVQ 199 Q I P ++ I Q + +R +L + ++ V+ Sbjct: 98 QQIRPSLIN---DADIEAEARRIYTLTQHQVDSLGGMVKVRHILLELGQRAPKSTETEVK 154 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESD-LHPQFQNLLKKSQNNT 257 +RI ++ K++ + G +L L + + Sbjct: 155 QRIDSIYKALKAGADFSEMARKYSDDKGSASAGGSLPWLQPGQTLPEFEAQAYRLKKGEM 214 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNA 312 + P+++ G I + DK + +L+ + +K + + + R+ A Sbjct: 215 SLPFLSPAGYHIILLEDKSNFLPYDSLRNDILCFIDQRNLRDKLIDDRLNE-RAQA 269 >gi|91788924|ref|YP_549876.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas sp. JS666] gi|91698149|gb|ABE44978.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas sp. JS666] Length = 643 Score = 77.0 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 45/160 (28%), Gaps = 8/160 (5%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 E ++ ++ R I K + QK AEE Sbjct: 243 VRKSITINEADLKTYYEQNLQRLSGAEERRASHILITSPKTASAEERQKAKAKAEELLAA 302 Query: 212 LPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQK 265 + K + A K S G + + F++ + + + ++ Sbjct: 303 VKKSPDTFADVARKNSQDPGSAPSGGDLDFFARGAMVKPFEDAVFSMKKGDISAVVESEF 362 Query: 266 GVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAE 303 G I + D + +K L A + +K +E Sbjct: 363 GYHIIRLTDIKAPKQRSFEEMKPELEADLKKQQAQKKFSE 402 Score = 44.3 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 29/330 (8%), Positives = 89/330 (26%), Gaps = 43/330 (13%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58 M + + LL ++ F + + Y ++G+ I + + Sbjct: 1 MFDFIRKHTKVTMALLFL-LIVPSFILFGLDGYNRSREQGVAVARVDGKDIIQSEWDRAH 59 Query: 59 --RIALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + L+ + + ++ L+ + + +K + + Q Sbjct: 60 QLEVDRLRASMPSLDAKLLDSPQARYATLERLVRDRVIAAAADKFKLVISDQRLARELQQ 119 Query: 109 -------HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 + L E + L QG+ F+ + V+ + + Sbjct: 120 SSEIASLRRSDGNLDMERYRQVLGSQGMSPEMFEANVRADLSNRQVLTGIGASGFSSSSA 179 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 A + ++ + + ++ +L + + Sbjct: 180 ADLALNAYFEKREIQLARF------NAADFAAKLSPTDADLDQFYKANEKLFQAPEQASI 233 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + ++ K+ + E+DL ++ L++ ++ + I + E Sbjct: 234 EYVMLDVETVRKSITINEADLKTYYEQNLQRLSGA-----EERRASHIL-ITSPKTASAE 287 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 K + E + ++ + Sbjct: 288 E-----------RQKAKAKAEELLAAVKKS 306 >gi|254691283|ref|ZP_05154537.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 6 str. 870] gi|256256468|ref|ZP_05462004.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 9 str. C68] gi|260756889|ref|ZP_05869237.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 6 str. 870] gi|260882704|ref|ZP_05894318.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 9 str. C68] gi|297249827|ref|ZP_06933528.1| peptidyl-prolyl cis-trans isomerase C [Brucella abortus bv. 5 str. B3196] gi|260676997|gb|EEX63818.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 6 str. 870] gi|260872232|gb|EEX79301.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 9 str. C68] gi|297173696|gb|EFH33060.1| peptidyl-prolyl cis-trans isomerase C [Brucella abortus bv. 5 str. B3196] Length = 311 Score = 77.0 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 30/280 (10%), Positives = 78/280 (27%), Gaps = 40/280 (14%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG I + DI + L A + E L ++ Sbjct: 51 AVSVNGVTIDEADILTEAQNHPAENPGAALLSAARTLAVRELLLQRAR------------ 98 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 ++ + D + ++ V++ + + E Sbjct: 99 ------------------EIGIEPEHEKDAEGRAETDEDALVRMVIEREVDV-PSASRDE 139 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220 + ++ ++ I + + R + + + Sbjct: 140 AQRYYENNRHRFTSAPILEASHILIAADPADQETRDAARQTATRLAAAVIAEPATFASVA 199 Query: 221 -KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN--PYVTQKGVEYIAICDKR- 276 +++S G L P+F+ L++ T P ++ G + + D+R Sbjct: 200 LEYSSCPSGAQGGNLGQLTRGSTVPEFERALERMTPGETTANPIESRFGYHIVRL-DRRV 258 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ + K ++Y+ L + A I Sbjct: 259 EGEELPFDYVADKIAGWLEASTWSKAVSQYIAILAAEAEI 298 >gi|229196551|ref|ZP_04323295.1| Foldase protein prsA 1 [Bacillus cereus m1293] gi|228586907|gb|EEK44981.1| Foldase protein prsA 1 [Bacillus cereus m1293] Length = 288 Score = 77.0 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 91/313 (29%), Gaps = 50/313 (15%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKIN 69 + +L L +++ + S + T + +T+ ++SK L+ + Sbjct: 2 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQKYGE 56 Query: 70 GELEKIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 L ++ + + L+ + E K + + + F GL ED Sbjct: 57 STLYQMVLSKALLDKYKVSDEEAKKKVEEAKDKMGENFKATLEQLGLKNED--------- 107 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K+ + + + +K K + + Sbjct: 108 ----ELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD-------------- 149 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQ 247 +K K+ +E ++++ G+ +F+ Sbjct: 150 ----------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFE 199 Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY-- 304 K + P T G I + DK++L +K + +++ ++ Sbjct: 200 EAAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQ 259 Query: 305 --VKKLRSNAIIH 315 V +L +A I Sbjct: 260 QVVNELLKDADIK 272 >gi|146329550|ref|YP_001209813.1| PpiC-type peptidylprolyl cis-trans isomerase [Dichelobacter nodosus VCS1703A] gi|146233020|gb|ABQ13998.1| PpiC-type peptidylprolyl cis-trans isomerase [Dichelobacter nodosus VCS1703A] Length = 421 Score = 77.0 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 28/270 (10%), Positives = 76/270 (28%), Gaps = 5/270 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I++ I+ +I + Q+ + + L + L +Q + T Sbjct: 153 ISEQQINNQITQIIRQRGTKFHLQDLLLPLPKKELPEQAYRQQMQTISQALKTTGNDLAK 212 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 L F+ ++V G +++ + Sbjct: 213 TAQLLPKAQFNDLGAVNLGQIPAKFAQAVATLNSGELVAEPVADADGLHFLKVVSKTAAN 272 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 E + D +Q + +++ V Sbjct: 273 GQHYEVEQGKLRHILIRRDPNNPQFSRLQIE--QLYQQLQSGADFAQLAARYSQDPRSAV 330 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAY 287 + G ++ L P+F ++ + N + P+ + G I + ++ + E ++ + Sbjct: 331 NGGDLGWMSTDQLDPRFVAVMHRIPFNTISEPFESALGWHIIEVFARQTVDRSEERIRDH 390 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + + ++R A I ++ Sbjct: 391 IRRTLYEEALALAWEQKCAQMRQAAYIRWF 420 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 31/312 (9%), Positives = 100/312 (32%), Gaps = 17/312 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKI 68 +KL+ +F L++ + + +N E I+ +++ + + + Sbjct: 1 MKLIILFFALMLLPSWALDFGPKPMPQQNVLDEIGLVVNEEAISRKRLNELLEQQRARAP 60 Query: 69 NGEL--EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED-FSSFLD 125 + E+ +++I++ L Q + + +T +++ A +S + Sbjct: 61 RDQPYSEEQLQEQIIMQILMAQMAKSAHLTVKDAEIDHAIATVAAQHKISVAQLYQQIAR 120 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 G+ ++Q +A + ++ + E +I ++ ++ ++ +L Sbjct: 121 TMGLSQTEYRQQIAQLMLQDELKQRLIGRDINISEQQINNQITQIIRQRGTKFHLQDLLL 180 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 +P +L Q + Q+ ++ + + + + + + Sbjct: 181 PLPKKELPEQAYRQQMQTISQALKTTGNDLAKTAQLLPKAQFN----DLGAVNLGQIPAK 236 Query: 246 FQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTPTKIE--K 299 F + + P G+ ++ + K G + L + Sbjct: 237 FAQAVATLNSGELVAEPVADADGLHFLKVVSKTAANGQHYEVEQGKLRHILIRRDPNNPQ 296 Query: 300 HEAEYVKKLRSN 311 +++L Sbjct: 297 FSRLQIEQLYQQ 308 >gi|213622668|ref|ZP_03375451.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 599 Score = 77.0 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 39/372 (10%), Positives = 91/372 (24%), Gaps = 85/372 (22%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-------------- 70 F + + Y S+ +NG+ I+ + + Sbjct: 1 FILTGVSGYL-IGGSNNYAAKVNGQEISRAQFENAFNNERNRMQQQLGDRYSELAANEGY 59 Query: 71 --ELEKIAVQELIVETLKKQEIEK-----------------SGITFDSNTVNYFFVQHAR 111 L + + LI E L Q + D N + Sbjct: 60 MKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVN 119 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI-------------WPDVVKNDFML---- 154 G++A+ ++ L Q + VV+ + Sbjct: 120 QMGMTADQYTQALRNQLTTQQLINGVAGTDFMLKGETDELAALVSQQRVVREAVIDVNAL 179 Query: 155 --KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE----- 207 K + E+ + + K + R + +Q ++ Sbjct: 180 AAKQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLDAATMQAPVSDADIQAYYDQHVDQF 239 Query: 208 ------------------------SRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 + + ++ ++ I + G +L ES Sbjct: 240 TQPERIRYSIIQTKTEDDAKAVLDALNKGEDFATLAKEKSTDIISARNGGDMGWLEESAT 299 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKH 300 P+ +N K + + + G + D + + ++ ++A+ K Sbjct: 300 VPELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPAKVKPLSEVRDDIAAKVKQEKALDA 359 Query: 301 EAEYVKKLRSNA 312 +K+ A Sbjct: 360 YYALQQKVSDAA 371 >gi|146281741|ref|YP_001171894.1| NifM protein, putative a peptidyl-prolyl cis/trans isomerase [Pseudomonas stutzeri A1501] gi|145569946|gb|ABP79052.1| NifM protein, putative a peptidyl-prolyl cis/trans isomerase [Pseudomonas stutzeri A1501] Length = 292 Score = 77.0 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 35/255 (13%), Positives = 83/255 (32%), Gaps = 8/255 (3%) Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + + E+I ++L +E E G+ V + + A L Sbjct: 31 SSQQREQAERIIGRQLQLENAVLHSAEACGVVIPDEQVADAWAEIAARYEDPLALHK-AL 89 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFM--LKYGNLEMEIPANKQKMKNITVREYLIRT 182 D G+ + +Q LA + V++ + + ++ + + + L R Sbjct: 90 DDSGLDEAGLRQLLARELKVETVLQRVCAGLPEITDTDVSLYYFNHPERFVRPATRLARQ 149 Query: 183 VLFSIPDNKLQNQGFVQ--KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 +L ++ ++ +N + AE + + + K + + G + Sbjct: 150 ILITVNEDFPENSRTSAWRRINLIAERLLRKPQRFAEQALKHSECPSAMEGGSLGLIRPG 209 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKI 297 L+PQ + L T G + + G + +L + + Sbjct: 210 VLYPQLEACLFALRAGEIGPVVETPLGFHLLFCEEIHPAGHLSLQEVLPHLREKLRARQY 269 Query: 298 EKHEAEYVKKLRSNA 312 E+H+ ++ L +A Sbjct: 270 ERHQRAWLAGLLQSA 284 >gi|49477885|ref|YP_036943.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49329441|gb|AAT60087.1| peptidylprolyl isomerase (protein export protein prsA) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 280 Score = 77.0 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + V+ + +S + S I TT +G I++ D +K++ K Sbjct: 1 MKRKKIVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGK 51 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E + D Sbjct: 52 QNLSEMVVEKVLNDKYKATDEEVT---------------KQIKELKTKMGDNFNTYMESN 96 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + L++ Sbjct: 97 GVKNEDQLKEKLKLTFAFEKAIKATVTEKEIKDHYKPKLQASHILVK------------- 143 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G + +F++ K Sbjct: 144 ---DEKTAKEIKEKLNNGEDFAALAKRYSEDPGSKEKGGDLSEFGPGMMVKEFEDAAYKL 200 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + K++L K + + +I+ + + + + Sbjct: 201 EVGQVSEPIKSSFGYHIIKLTGKKELKPYEEEKVNIRKELEQQRIQDPQFHQQVTRDILK 260 Query: 311 NAIIH 315 NA I Sbjct: 261 NADIK 265 >gi|315185798|gb|EFU19564.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta thermophila DSM 6578] Length = 346 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 112/341 (32%), Gaps = 37/341 (10%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 ++L +++ + P A +R++ T EVIT + LL+ Q Sbjct: 1 MRLWKIVLGVVVMGLFPAFGQIIDAPVARVKLT-KLEVITQRQFKADVELLEKQLGRQLS 59 Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN---TGLSAEDFSSFLDK 126 E K + I E L Q EK ++ ++ Q+ ++ E + Sbjct: 60 LEERKQLLDARIGEILIYQAAEKEYLSVTQEELSQAIAQYKQSVAPNVSDQEFRRLIESQ 119 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG----NLEMEIPANKQKMKNITVREYLIRT 182 G+ F++ + + I + + E EI + + ++R Sbjct: 120 GGMTWEQFQEQMKKRLIAEKYLYQKKGQEIQNVPAPSEEEIRRVYNENISNFTAPEMVRY 179 Query: 183 VLFSIPD---NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLL 238 I + + + + ++ +E L K +EK++ G YLL Sbjct: 180 SHIFIDTRGLSDEEKKKAYNRVLQVKKEVDGSLEKFREAVEKYSDDQASRYQGGDVGYLL 239 Query: 239 ESDLH-------PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL-----------GG 280 +D F + N ++ + G + + + + Sbjct: 240 RTDKQRESFLGKEFFSKIFSLPLNKVSDVLASNVGYHIVVVTEHHEPRLLGLDDRLLPNS 299 Query: 281 EIALKAYLSAQNTPTKIEKHEAE----YVKKLRSNAIIHYY 317 + ++ ++A K ++ + +++LRS A + Y Sbjct: 300 KQTVRDQITALLVGQKRQEAYQKALQKLIEELRSQADVSIY 340 >gi|319941473|ref|ZP_08015801.1| hypothetical protein HMPREF9464_01020 [Sutterella wadsworthensis 3_1_45B] gi|319805093|gb|EFW01923.1| hypothetical protein HMPREF9464_01020 [Sutterella wadsworthensis 3_1_45B] Length = 261 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 87/305 (28%), Gaps = 50/305 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GEL 72 ++ + VL + V +V + A++ T+NGE + + EL Sbjct: 1 MIKSKLVLALALSVGLVGSAAAALTD---MTVNGEKVPASRLEAVYNNAVKAGAKAGPEL 57 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 E +++ E + QE K+ I + + Sbjct: 58 EARVKRDVTEEVVLLQEAAKAKIDRTKEYRDAIDRVGKQ--------------------- 96 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + +++ D+ K + E+ A K + + Sbjct: 97 ----------LKVELLVADYAKKNPVSDKEVRAAYDNAKKVYGDTEYQVRHILV------ 140 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 ++ K+ + + K + + + G +L S++ P F N K Sbjct: 141 ----KTEQEAKNIIQRLNKGEKFDALAKSESLDPKSGPAGGLIGWLSPSNVEPNFGNAFK 196 Query: 252 K-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 S + P Q G I + KR ++ + + + +L Sbjct: 197 ILSAGDVAQAPIQNQFGWHVIKLDAKRSQKNFPTYESQ-KDSLRAQLSQLNAKRHFAELV 255 Query: 310 SNAII 314 A + Sbjct: 256 QKAKV 260 >gi|228915458|ref|ZP_04079047.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228844105|gb|EEM89165.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 280 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + V+ + +S + S I TT +G I++ D +K++ K Sbjct: 1 MKRKKIVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGK 51 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E + D Sbjct: 52 QNLSEMVVEKVLNDKYKATDEEVT---------------KQIKELKTKMGDNFNTYMESN 96 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + L++ Sbjct: 97 GVKNEDQLKEKLKLTFAFEKAIKATVTEKEIKDHYKPKLQASHILVK------------- 143 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G + +F++ K Sbjct: 144 ---DEKTAKEIKEKLNNGEDFAALAKQYSEDPGSKEKGGDLSEFGPGMMVKEFEDAAYKL 200 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + K++L K + + +I+ + + + + Sbjct: 201 EVGQVSEPIKSSFGYHIIKLTGKKELKPYEEEKVNIRKELEQQRIQDPQFHQQVTRDILK 260 Query: 311 NAIIH 315 NA I Sbjct: 261 NADIK 265 >gi|88703271|ref|ZP_01100987.1| peptidyl-prolyl cis-trans isomerase D [Congregibacter litoralis KT71] gi|88701985|gb|EAQ99088.1| peptidyl-prolyl cis-trans isomerase D [Congregibacter litoralis KT71] Length = 622 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 45/400 (11%), Positives = 96/400 (24%), Gaps = 88/400 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI----TDGDI 56 M + + + + ++I F I I S S +NGE I ++ Sbjct: 1 MLQDIRANAQGTVAKIIIGLIVISFSIFGIESLLFSGGSDG-VAEVNGEEITPFALQQEV 59 Query: 57 SKRIALL--------------KLQKINGELE--------------------KIAVQELIV 82 S + L + Q LE A+ ++I Sbjct: 60 SVQQRRLLSILGENADPALLDQAQLSQQALETLIQREIIKQAAADLELTTSDQALADIIG 119 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + Q + + + A +ED + GI + F ++ Sbjct: 120 SMGQFQIDGQFSPDMFQSALASAGFTPALFRERLSEDVEIGQLRAGIAGSDFTTAAELEL 179 Query: 143 IWPDVVKND-----------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 ++ FM + + A E + I ++ Sbjct: 180 ASAIALEGRDVRYVSLPLIDFMASVEVSDEAVEAFYNDNPERFQSEEQLVLEYVEITLDR 239 Query: 192 LQNQGFVQKRIKDAEESRLRLP----------------------------------KDCN 217 ++ ++ E R Sbjct: 240 YIEDIDEERVREEFELVRDEFELATEARVSHILVEGDDEERAARIAEAQAALDAGMSFAE 299 Query: 218 KLEKFASKIHDVSI-GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 +++ I G Y ++ + + + P T+ G + + D+ Sbjct: 300 AAAEYSDDIGSSQFEGDLGYTAGDTFPEAMEDAVANLAVGERSAPVETEAGTHLLLVTDR 359 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 R+ + L + V++LR A Sbjct: 360 REGSNVSFEEVAEELEDRIARRDAAAELLSDVERLRDIAF 399 >gi|320161645|ref|YP_004174870.1| putative peptidylprolyl isomerase [Anaerolinea thermophila UNI-1] gi|319995499|dbj|BAJ64270.1| putative peptidylprolyl isomerase [Anaerolinea thermophila UNI-1] Length = 438 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 10/123 (8%), Positives = 36/123 (29%), Gaps = 10/123 (8%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 ++ K+ + + +++ G + + + +F++ + Sbjct: 301 ETEETAKEVLDRLNKGEDWVKLAAEYSKDTSNANKGGDLGWFGKGTMVKEFEDAVYALKV 360 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + P T G I + + + K + E++ + +S + Sbjct: 361 GEISQPVQTTFGYHIIQLLGREVRPLTDSE--------FNQKKQAAYDEWLTQAKSADTV 412 Query: 315 HYY 317 + Sbjct: 413 KTF 415 Score = 37.7 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 17/159 (10%), Positives = 40/159 (25%), Gaps = 33/159 (20%) Query: 14 KLLTTYFVLIIFCIVPIVSY----KSWAMSSRIRTTINGEVITDGDISKRIALLKLQK-- 67 + L +++ ++ ++ Y +S +R + E IT + + + Sbjct: 27 RYLLLGTAIVLIAVIGLIVYGILDQSVLKQNRAVAQVGNEKITVKEFQTEAKFWRYLQVQ 86 Query: 68 ---------------------------INGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 + K + +I + L QE K GIT Sbjct: 87 QYNNLASNPLLVQFYGSYLQELETSLADPQTIGKQVLDAMIEDALVAQEAAKRGITVSEE 146 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 ++ + + +Q Sbjct: 147 EIDKEMQEAFGFYINGTPTPTLTATPFATATLTTQQLTW 185 >gi|229030040|ref|ZP_04186105.1| Foldase protein prsA 1 [Bacillus cereus AH1271] gi|228731301|gb|EEL82218.1| Foldase protein prsA 1 [Bacillus cereus AH1271] Length = 288 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 31/312 (9%), Positives = 86/312 (27%), Gaps = 48/312 (15%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKIN 69 + L L +++ + S + T + +++ ++SK L+ + Sbjct: 2 RYFGLKKNKLFLGTIISCVVLALSACGSSDNVVTSKVGN--VSEKELSKE---LRQKYGE 56 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 L ++ + + +++ K + G + + Sbjct: 57 STLYQMVLSKALLDKYK----------VSDEEAKKQVEEAKEKMGDNFKST--LEQVGLK 104 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 ++ K+ + + + +K K + + Sbjct: 105 NEDELKEKMKPEIAFEKAIKETVTEKDVKENYKPEMKVSHILVKD--------------- 149 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN 248 +K K+ +E ++++ G+ +F+ Sbjct: 150 ---------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEE 200 Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY--- 304 K + P T G I + DK++L +K + +++ ++ Sbjct: 201 AAFKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDQIRKDLEQQRLQDTTGKWKQQ 260 Query: 305 -VKKLRSNAIIH 315 V L +A I Sbjct: 261 VVNDLLKDADIK 272 >gi|39995469|ref|NP_951420.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Geobacter sulfurreducens PCA] gi|39982232|gb|AAR33693.1| PPIC-type PPIASE domain protein [Geobacter sulfurreducens PCA] gi|307634691|gb|ADI83192.2| peptidylprolyl cis-trans isomerase, PpiC-type [Geobacter sulfurreducens KN400] Length = 297 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 23/262 (8%), Positives = 65/262 (24%), Gaps = 12/262 (4%) Query: 58 KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 + I + + L + + I + + + + + +Q + Sbjct: 23 EEINPVVGKAGEFTLREADLDRFIDALPAEAQQQLRKNPEQRSLLAREILQTRAIAMKAR 82 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 +D + Y + + + + + E+ A Q+ V Sbjct: 83 KDGF----DRKPEVRERLGYFVDDFLAREYLTKVVIAGVKVSDAELRAYYQEHAKDFVMP 138 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI----HDVSIGK 233 I + E RL K + A G Sbjct: 139 EQAIVRHIFIGFTDAADSQAKAAAKTKTEGVLERLKKGEDFAAVAAEASEDIESAKEGGL 198 Query: 234 AQYLLESDLH--PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLS 289 + + + + + + G + + ++++ +K L Sbjct: 199 LGAITPGQTNSEEFEKAVFALKAGEMSGLVESPFGYHIVKVDERKEKRALPFDEVKDALR 258 Query: 290 AQNTPTKIEKHEAEYVKKLRSN 311 ++ +K E+V ++ Sbjct: 259 SKLQGEAEQKKLREFVDEVAKQ 280 >gi|163940109|ref|YP_001644993.1| peptidylprolyl isomerase [Bacillus weihenstephanensis KBAB4] gi|229011588|ref|ZP_04168774.1| Foldase protein prsA 1 [Bacillus mycoides DSM 2048] gi|229059985|ref|ZP_04197359.1| Foldase protein prsA 1 [Bacillus cereus AH603] gi|229133173|ref|ZP_04262008.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST196] gi|163862306|gb|ABY43365.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus weihenstephanensis KBAB4] gi|228650299|gb|EEL06299.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST196] gi|228719398|gb|EEL71002.1| Foldase protein prsA 1 [Bacillus cereus AH603] gi|228749743|gb|EEL99582.1| Foldase protein prsA 1 [Bacillus mycoides DSM 2048] Length = 283 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 83/306 (27%), Gaps = 49/306 (16%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F+ I V + + + + + +T+ ++SK L+ L ++ Sbjct: 4 KKLFMGTIIACVALTLSACGSSENVATSKVGN--VTEKELSKE---LRQTYGKSTLSQMM 58 Query: 77 VQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + + L+ + E K + + F GL ED K Sbjct: 59 LNKALLDKYKVSDEEAKKQVEAAKEQMGDKFKVALEQVGLKNED-------------ELK 105 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + ++ K + + Sbjct: 106 ERMKPEIALEKAIRATVTDKDVKDNHKPEMKVSHILVKD--------------------- 144 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 +K K+ +E ++++ G+ +F+ K Sbjct: 145 ---EKTAKEVKEKINNGEDFTALAKQYSEDTGSKEQGGEIAGFAPGQTVKEFEEAAYKLD 201 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLR 309 + P T G I + DK++L +K + +++ ++ + L Sbjct: 202 AGQVSEPIKTSYGYHIIKVTDKKELKPFDEVKDTIRKDLEQQRLQDATGKWKQQVINDLL 261 Query: 310 SNAIIH 315 A I Sbjct: 262 KEADIK 267 >gi|218961314|ref|YP_001741089.1| putative Peptidylprolyl isomerase [Candidatus Cloacamonas acidaminovorans] gi|167729971|emb|CAO80883.1| putative Peptidylprolyl isomerase [Candidatus Cloacamonas acidaminovorans] Length = 595 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 40/372 (10%), Positives = 95/372 (25%), Gaps = 63/372 (16%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ I ++ F+L V I S +NG IT ++I Sbjct: 1 MLDQLRKKQKVVIYIVAIVFILG-MAAVGIGELLSPK---PYLGKVNGTKITYEMYQQKI 56 Query: 61 ALLKLQ------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + + + +E A + L+ + L +Q+I+K I + V Sbjct: 57 QEIYERYAEMYKDQPIDENMRRNIENQAWETLVNDILWQQQIKKHKIKITEDDVLTEMQN 116 Query: 109 HARN----------TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK--- 155 + G + K + + ++ + Sbjct: 117 NPPQELMQNESLQTNGRFDKSKYLSALKNNPQFFAAMEEYVRGYLPRQKLQEKIKAQAGI 176 Query: 156 ------------------------------YGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + EI A K + ++ + + Sbjct: 177 TIDSLKAQYAKETDSISGKFIWFEPNKSDPVTVTDAEIKAYYDKNRETEYKKGPASRIKY 236 Query: 186 SIPDNK--LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL 242 + K ++ V+ ++ R ++++ + G + + Sbjct: 237 LAFEEKPSDKDYASVKLLAEELYNRARRGEDFATLAKEYSDDPGSKDNGGSLGVFGKGQM 296 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 P+F+ + + P T G I + + ++ + Sbjct: 297 VPEFEQVAFALKVGEISKPVKTSFGWHIIRCDSIATITKDNPQIKASHILLIVEASDETK 356 Query: 302 AEYVKKLRSNAI 313 + K S A Sbjct: 357 NAILDKAESAAK 368 Score = 36.6 bits (82), Expect = 4.6, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 1/63 (1%) Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKKLRSN 311 T+ T++G I+ ++ K Q T + + ++R + Sbjct: 523 EAGQTSGLIHTKEGSFIISCTERIKPDFNAFAKDKERQEQIRKTLEDAAWNRWYDQMRKS 582 Query: 312 AII 314 A I Sbjct: 583 AKI 585 >gi|73667407|ref|YP_303423.1| hypothetical protein Ecaj_0794 [Ehrlichia canis str. Jake] gi|72394548|gb|AAZ68825.1| ATP synthase F1 subcomplex epsilon subunit [Ehrlichia canis str. Jake] Length = 399 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 113/310 (36%), Gaps = 14/310 (4%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI-- 68 I + L+I C++ S +I +N ++I++ D+ KR+A+ K Sbjct: 1 MIINMFNHAVRLLILCVMLFSST--VFADVKIVAMVNDDLISNLDLEKRVAINKFFYKVD 58 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 +IA+ LI E++ +QE +K IT + Q L DF S+++ QG Sbjct: 59 GSTAAEIALDALIDESIWRQEAKKLKITVTERDILEAVKQFLVMKNLGNIDFKSYVETQG 118 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + F Q++ + +W ++ + E EI N+ + + I Sbjct: 119 LDYKMFMQHMKSKLLWNKILMLKVIPYIIISEKEIRDNRDCTVTNGID--TSVHIQEIIV 176 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 + + + I ++ + + + + +++ L + L Sbjct: 177 PASVSDNESIIDSIMSDLQNGVSVESIQANKKDVLVEEASINVKNIDVDLANKL------ 230 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKK 307 L + P Q G I + + D+ E A + L + + K + + + Sbjct: 231 -LNVKVGDMIGPIKNQHGSFIIKLLHRADINREFASSSVNLKQIHLNVEEGKKYSSQISQ 289 Query: 308 LRSNAIIHYY 317 L++ A + Sbjct: 290 LKTKATCENF 299 >gi|288575146|ref|ZP_06393503.1| hypothetical protein Dpep_2422 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570887|gb|EFC92444.1| hypothetical protein Dpep_2422 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 350 Score = 76.6 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 41/331 (12%), Positives = 96/331 (29%), Gaps = 25/331 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSY--KSWAMSSRIRTTINGEVITDGDISK 58 M + T + + FVL I + + + I+G+ + + + Sbjct: 1 MLRTLRTQVKWILVFFLLCFVLAIPLMYGVGGGKSSRSSNEDYAVAEIDGKKLMRSQLLR 60 Query: 59 RIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 + + + + ++ + +++V+ +E++ GIT ++ Sbjct: 61 SVQDYVERAGIKDVTSTDLPMIRQMVLDQMVVQEALLKEVKALGITPSKEELDQAVSGIE 120 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + E F +L + GI N ++ L Q +++ N E Sbjct: 121 DQF-PTKEAFMQYLQETGITMNDLREQLKTQLSQQMLLEEASAAAKVNDEELQALYDSVK 179 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 + L + Q+ A E LE+F+S S Sbjct: 180 DFVFTVPE---------GFEVLAAEFSSQEAANKAYEELSSGTSWDVVLEEFSSSDITGS 230 Query: 231 IG--KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI---AICDKRDLGGEIALK 285 G K +L + L + P + R++ K Sbjct: 231 TGSEKPAFLKKDSLPENLAFIASMDDGQYAEPVEVASDDFIVVYRKSAKDREVTSFEDAK 290 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 L + K ++ + ++ ++ + Sbjct: 291 EQLQSMVLNQKRQELQRTFLDEISEKVDVKI 321 >gi|261346360|ref|ZP_05974004.1| peptidyl-prolyl cis-trans isomerase D [Providencia rustigianii DSM 4541] gi|282565674|gb|EFB71209.1| peptidyl-prolyl cis-trans isomerase D [Providencia rustigianii DSM 4541] Length = 622 Score = 76.6 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 41/398 (10%), Positives = 98/398 (24%), Gaps = 86/398 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T + + +++ F + + Y S+ +NG+ I+ + + Sbjct: 1 MMEDLRTKANSPFIKVLLAIIILSFVLTGVAGYVIGGSSND-AAEVNGQPISREQLQQAF 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + EL A+ LI L Q + ++ + Sbjct: 60 QQERQSLQEYLGDKFAEVASNDEYMKELRTQALNNLINTQLINQYANELNLSASDKQIEQ 119 Query: 105 FFVQH---ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + +E + L + I + F + + + K Sbjct: 120 AIFAMQIFQTDGKFDSEKYREILSRYNINADSFAAQIRQDLVRAQLGKSFTGTEFALPSE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRT------ 182 + K E E+ A +N + ++ Sbjct: 180 VKAYAELFMQQREVRTAMLPLAEVQAKQTVTEEELKAYYDANQNSFISPEQVQVSYVEMD 239 Query: 183 ------------VLFSIPDNKLQNQGFVQKRIKDAE-------------ESRLRLPKDCN 217 + + L+N ++++ E + Sbjct: 240 AASMPKATVNDEEITTYYQQNLKNFTKAEQKLYSMIQVASEKDAQALETELKNGADFAAL 299 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 EK K + G ++ + + + + + P Q + D Sbjct: 300 AAEKSTDKFSASNKGVIGWMEAASTPSEIISANLTEKGQVSAPIKVQDNYVLFRLDDITP 359 Query: 278 --LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + +K + T K K + +K+ A Sbjct: 360 EAIKPLDEVKDSIKTSLTQDKSIKQFYDLQQKVSEAAT 397 >gi|325577782|ref|ZP_08148057.1| peptidyl-prolyl cis-trans isomerase [Haemophilus parainfluenzae ATCC 33392] gi|325160527|gb|EGC72653.1| peptidyl-prolyl cis-trans isomerase [Haemophilus parainfluenzae ATCC 33392] Length = 625 Score = 76.6 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 40/394 (10%), Positives = 98/394 (24%), Gaps = 84/394 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ FI + + F I + Y ++ + +NGE I+ D R Sbjct: 2 LIEKMHGIAHSFIGKAIFALIPVSFLIGGMSGYL-YSSNDSFAAKVNGETISQQDFLNRY 60 Query: 61 ALLKLQKINGE----------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + E L + +Q L+ + L +Q ++ + + Sbjct: 61 NQEFEARAQQEGESFLAKTDSVEFVTALRQNLIQRLVDQELIRQYAKELKLGVSDEMIKR 120 Query: 105 FFVQH--------------------------------------ARNTGLSAEDFSSFLDK 126 V + A+ + Sbjct: 121 AIVSDPNLQSNGKFDNVRYQQLLSQNGLTSDTYAAILRNALTLEQMQNGLADSEFVVPAQ 180 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL-- 184 F Q + + K + E++ + + + ++ + Sbjct: 181 VKDNAQVFFQKRIARLATLPLADEIAKQKVTDEEIKAYYDANAKSLVQPEQAKVQYIHVS 240 Query: 185 ------------------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 I Q +K + + + Sbjct: 241 ANELGKLQPVTETQIAQYYQENKAQFISQKLAHIQLSTEKEADSVYQELKKGADFAELAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + K+ G+ ++ +++L F++ + + P I + D+++ Sbjct: 301 TKSLDKLSGAQGGELGWVKDNELPKNFEDAALLLNVGQYSTPVNVDGAYHIILVQDRKER 360 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 E +K ++ E K +R A Sbjct: 361 TLEE-VKEQIADTVRKNLAESRFQAVEKAVREKA 393 >gi|282859615|ref|ZP_06268718.1| PPIC-type PPIASE domain protein [Prevotella bivia JCVIHMP010] gi|282587618|gb|EFB92820.1| PPIC-type PPIASE domain protein [Prevotella bivia JCVIHMP010] Length = 486 Score = 76.6 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 34/284 (11%), Positives = 71/284 (25%), Gaps = 20/284 (7%) Query: 34 KSWAMSSRIRTTINGEVITDGDISK-----RIALLKLQKINGEL--EKIAVQELIVETLK 86 + + E I ++ +K L E+IAVQ+L + Sbjct: 54 SGKNTIDEVIWVVGDEPILLSEVEITKLQGEAEGMKWDGDPEYLVPEQIAVQKLFLHQAA 113 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 I S + S E + K Sbjct: 114 LDSISVSESEIAQGVEQQINYWISLPQIGSKEKLEEYQRKSVAQIRQDLHDDYKNRQLVQ 173 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 ++ + E+ A +K+ ++ R + + + V + Sbjct: 174 KMQEQLVSDLKVSPAEVRAYFKKLPADSIPTIPTRVEVEILTQTPKIEKEEVSRIKNQLR 233 Query: 207 ESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKKSQN--NTTN 259 + R+ K E A G+ ++ + L P F + + Sbjct: 234 DYTDRVNKGETSFETLARLYSEDPGSARQGGELGFIGRAALDPAFAGAAFNLTDPKKLSK 293 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 ++ G I + DKR + K+ + + Sbjct: 294 IVESEFGYHIIQLIDKRGDKIN------VRHILLKPKVSQASID 331 >gi|332971823|gb|EGK10770.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter sp. 1501(2011)] Length = 624 Score = 76.6 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 41/398 (10%), Positives = 105/398 (26%), Gaps = 87/398 (21%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + L + + L I+ + SY + + ++ T+ + IT + I Sbjct: 1 MESIRNFLQSWPGRIFLMLCLSPLVILGLESYFTGSANANDVATVGDQTITRAEYQDAIN 60 Query: 62 LLKLQK----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 + + L + ++ LI L + + + G+ +N +Q + Sbjct: 61 TRRNELLQNGVEASAINTNALNREVLKGLINRALLRNQSGQLGMHVSDKVINDLLLQDPQ 120 Query: 112 ----NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------------- 148 N S + F+ L +QG+ + Q + Sbjct: 121 FLDENGQFSNDRFAFSLQQQGMTKDQLFDQYRQQLNLMQLYAGVAQTAIYPESEINDLLA 180 Query: 149 --------------KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ- 193 + K EI + KN ++ + K+ Sbjct: 181 LQLETRDVWVYRLPWEQYKDKVSVSAKEIENYYNEHKNDLNSVAMVDLAYIQLDPAKVAV 240 Query: 194 --------------------------------NQGFVQKRIKDAEESRLRLPKDCNKLEK 221 ++ I+ ++ + ++ Sbjct: 241 DKVTEKEIQAQYDAFKANYKGAANQKLSQILITGDKAEQTIQQIQKRLKQGESFAALAKQ 300 Query: 222 FASKI-HDVSIGKAQYLLESDL----HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK- 275 ++ G + + +++ + P T G + + + Sbjct: 301 YSEDPISAAKGGDIGTFNPDVFGADGAKVAKAIEGLNKDQISAPVKTSFGYQLFKVTEMS 360 Query: 276 -RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + +++ L AQ K E+ A+ + ++ A Sbjct: 361 GDSVPSLASMREELVAQAQRQKREQLIADKITRINEMA 398 >gi|149372557|ref|ZP_01891669.1| putative exported peptidyl-prolyl cis-trans isomerase [unidentified eubacterium SCB49] gi|149354600|gb|EDM43164.1| putative exported peptidyl-prolyl cis-trans isomerase [unidentified eubacterium SCB49] Length = 490 Score = 76.6 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 25/276 (9%), Positives = 69/276 (25%), Gaps = 13/276 (4%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGITF 97 + + VI + DI LK Q I + +L+ + L ++ I Sbjct: 68 EGVTAVVGEYVIVEFDIDLSYQELKAQGIPVEEISRCQLMGKLMEDKLYAHHAKQDSIMV 127 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV----VKNDFM 153 N + Q + + ++ + Sbjct: 128 SDNEITQQIDQQMEYMVSELGSEEKVAAYYRKESISELRKELFEVNKTQKLAGEMQRSII 187 Query: 154 LKYGNLEMEIPANKQKMKNI----TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 E+ + + E + ++ + Q + + + + Sbjct: 188 ENVEVTPEEVRSFFYNIPEDERPIFSAEVEVAQLVVEPKITQESRQDAIDQLNEWRTDIL 247 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKA-QYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGV 267 K ++ G S + +F++ + + P+ T+ G Sbjct: 248 ENGSSFATKAVLYSKDGSAQKGGLIAGVRRNSPMAKEFKDQAFSLLEGEISEPFQTEFGF 307 Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 + + R +I + + ++ + Sbjct: 308 HILKVDKIRGQELDIRHI-IIFPEIKQETMDAAYKK 342 >gi|283954124|ref|ZP_06371649.1| major antigenic peptide PEB4 [Campylobacter jejuni subsp. jejuni 414] gi|283794403|gb|EFC33147.1| major antigenic peptide PEB4 [Campylobacter jejuni subsp. jejuni 414] Length = 273 Score = 76.6 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 36/299 (12%), Positives = 94/299 (31%), Gaps = 35/299 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 + +++ + +++ T+NG+ I+D ++S+ A + + L + LI Sbjct: 4 FSLVVAALIAGVALNVNAATVATVNGKSISDAEVSEFFASMLRGQDFKTLPDNQKKALIQ 63 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + + I + + + A + Sbjct: 64 QYIMQDLILQDAKKQNLEKD---------------------------PLYTKELDRAKDA 96 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 I +V + + ++ A + K+ V+ ++ + K + + Sbjct: 97 ILVNVYQEKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKG 156 Query: 203 KDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTN 259 +E + K ++ + G+ + ES + F + +N TT Sbjct: 157 LKGKELDAKFSK---LAKEKSIDPGSKNQGGELGWFDESTMVKPFTDAAFALKNGTITTT 213 Query: 260 PYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P T G I + + +K + + +K + + L ++A + Y Sbjct: 214 PVKTNFGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEY 272 >gi|194289547|ref|YP_002005454.1| peptidyl-prolyl cis-trans isomerase [Cupriavidus taiwanensis LMG 19424] gi|193223382|emb|CAQ69387.1| PEPTIDYL-PROLYL CIS-TRANS ISOMERASE [Cupriavidus taiwanensis LMG 19424] Length = 644 Score = 76.6 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 31/259 (11%), Positives = 70/259 (27%), Gaps = 11/259 (4%) Query: 52 TDGDISKRIALLKLQKINGELEKI---AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 T R+ + G + LI + ++ ++ Sbjct: 150 TPEQFDARMRFELAMQQLGASVAATAFVPKSLIERLMAARDQQRDVQALLFKPAG----Y 205 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 A+ +A + + Q + + + + + + L+ +N Sbjct: 206 TAKVQPDAAALKAYYDSHQQDFSVPEQAKVEYLVLSGEALAASQAVTPEELKSYYESNIA 265 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-H 227 + + R + Q Q K K EE R + K + Sbjct: 266 RFRVDEQRRASHILISAPKDAPAAQRQAAKDKATKLLEEVRKHPDTFADVARKNSQDPGS 325 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIAL 284 G ++ L F++ + + ++ T G I + + A+ Sbjct: 326 AEKGGDLGFMGRGALVKPFEDAMYALKEGQISDVVETDFGYHIIKLTGTKPAETRPLEAV 385 Query: 285 KAYLSAQNTPTKIEKHEAE 303 + L A+ +K AE Sbjct: 386 RTELEAELRKQFADKKFAE 404 Score = 48.9 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 17/145 (11%), Positives = 42/145 (28%), Gaps = 21/145 (14%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-------------ALLKLQKING 70 F + SY + SS ++G I+ ++ + Q Sbjct: 23 SFVFFGVESYSRFMDSSHDAAKVDGRAISVQEVDNVVRDQSERARQILGANYDPRQFEGP 82 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--------QHARNTGLSAEDFSS 122 E K +++LI + + + +T + ++ + + + Sbjct: 83 EARKAVLEQLIQQRVMANAVASEHLTVSDAKLLEEISSLPAIAQLPRGKDGKIDDKAYLQ 142 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDV 147 L QG+ F + + + Sbjct: 143 LLQSQGMTPEQFDARMRFELAMQQL 167 >gi|228990140|ref|ZP_04150111.1| Foldase protein prsA 1 [Bacillus pseudomycoides DSM 12442] gi|228769579|gb|EEM18171.1| Foldase protein prsA 1 [Bacillus pseudomycoides DSM 12442] Length = 281 Score = 76.6 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 45/299 (15%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 ++ +++ + S +I T+ G+ I+ D+ K++ K ++ + Sbjct: 4 AMLALAATSLIALSACGSSDKIVTSKAGD-ISKEDLYKQMK--------DRAGKQILRGM 54 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 ++E + + D + F + L +QG + FK+ + Sbjct: 55 VLEKVLLKNHTVDDKEVDKKYD--------EYKKQLGDQFDAALKQQGFTKDSFKESVRA 106 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + +++ K + + + Sbjct: 107 ELAMDKAIESSITDKELKENYKPEIKASHILVKD------------------------EA 142 Query: 201 RIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT 258 K +E + ++++ G Y + +F + K ++ + Sbjct: 143 TAKKVKEELGQGKSFEELAKQYSEDKGSAEKGGDLGYFGPGKMVKEFSDAAYKLKKDEVS 202 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRSNAIIH 315 P +Q G I + D ++ KA + K + + AE K A + Sbjct: 203 EPVKSQFGYHIIKVTDIKEQKSFEEEKANIKKGLVEKKKQDPQFMAELQDKELKKADVK 261 >gi|227499598|ref|ZP_03929705.1| possible peptidylprolyl isomerase [Anaerococcus tetradius ATCC 35098] gi|227218357|gb|EEI83611.1| possible peptidylprolyl isomerase [Anaerococcus tetradius ATCC 35098] Length = 249 Score = 76.6 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 30/275 (10%), Positives = 80/275 (29%), Gaps = 45/275 (16%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQK--INGELEKIAVQELIVETLKKQEIEKSG 94 ++++ +NG+ I D+ + + ++ + + E I E+I + + + G Sbjct: 3 EDTNKLLAEVNGKKIYQEDVYQLMQNIEDNQRFNSEEGLHILADEMINQEILLADAYNEG 62 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 D V+ L ++ + + Sbjct: 63 YDKDKEFVDEL-------------------------------ELVKNNMLKNYAMHKIFE 91 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + E E+ + K L + D + +E + + Sbjct: 92 QVKLDEAEVKQYYEANKETLNPPVLYEASHILVNDLAEA---------QKIKEEIDKGLE 142 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 +K++ + G + + +FQ+ + + P +Q G I + Sbjct: 143 FAVAAKKYSIDPSKANGGSLGKFPKGVMVKEFQDGLDSINIGEVSKPIKSQFGYHLIKLE 202 Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 +K D +K + + K ++ + + Sbjct: 203 NKENVDTPSFDKIKDQVYQRLLMVKRQEAYLDKLS 237 >gi|56479244|ref|YP_160833.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aromatoleum aromaticum EbN1] gi|56315287|emb|CAI09932.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aromatoleum aromaticum EbN1] Length = 633 Score = 76.6 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 18/201 (8%), Positives = 53/201 (26%), Gaps = 11/201 (5%) Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 L + + D + A ++ +N + + + EI + Sbjct: 201 AQVELPDDAAKKYYDANPERFERPARLRAEYLVFD---ENALLKQVSVSDDEIRKFYEAN 257 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH--- 227 + I V K + A ++ + + + A Sbjct: 258 TARFGQPEERNARHILIEAAADAPAEEVAKASEKAAALLAQVRANPERFAELAKAESQDP 317 Query: 228 --DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEI 282 G+ + + F++ + + ++ + G I + D + Sbjct: 318 GSAARGGELGFFGRGAMVKSFEDAVFSLEKGQISDVVRSDFGFHIIQVVDIKPAKARPFE 377 Query: 283 ALKAYLSAQNTPTKIEKHEAE 303 ++ ++ + + AE Sbjct: 378 EVRDEIAEELKRQAASRRLAE 398 Score = 53.1 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 26/235 (11%), Positives = 62/235 (26%), Gaps = 17/235 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M V + I + +++ F + SY + T+ G I+ + + + Sbjct: 1 MFDAVRN--NKRIAQIILALLIVPFAFFGLDSYFTSGPGGNEIATVGGSKISMNEFDQAL 58 Query: 61 ALLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + + + + V+ L+ + L SG+ + Sbjct: 59 RDQQDRLRQSMGGQVDRAMLESEAMRRSVVENLVNQRLLAMHAADSGLVVTQQQLQQVIA 118 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + + A + D+ L G A+ Sbjct: 119 TVPAFQEDGRFSLERYEAAVRAQGMTPAMFEAR--LGQDLRVQQVALAVGQSAFTAQASV 176 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 Q+ + E + + FS Q + K + + R + ++ Sbjct: 177 QRFLEAQLEERKVSELKFSPDAFLAQVELPDDAAKKYYDANPERFERPARLRAEY 231 >gi|281423985|ref|ZP_06254898.1| peptidyl-prolyl cis-trans isomerase [Prevotella oris F0302] gi|281401910|gb|EFB32741.1| peptidyl-prolyl cis-trans isomerase [Prevotella oris F0302] Length = 477 Score = 76.6 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 31/297 (10%), Positives = 79/297 (26%), Gaps = 37/297 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 V+I ++ S + + T+NG+ + + Sbjct: 7 VIISLAMLLYGSMAFSQSNDPVVMTVNGKPVLRSEFEYAYR------------------- 47 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + + + + L E + Sbjct: 48 ----------KNNSAGVIDRKSVEEYAELFIDYKLKVEAALAAQLDTLTSFKEEFAGCRD 97 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG-FVQ 199 Q I P ++ I Q + +R +L + ++ V+ Sbjct: 98 QQIRPSLIN---DADIEAEARRIYTLTQHQVDSLGGMVKVRHILLGLGQRAPKSTETEVK 154 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESD-LHPQFQNLLKKSQNNT 257 +RI ++ K++ ++ G +L L + + Sbjct: 155 QRIDSIYKALKAGADFSEMARKYSDDKGSALAGGSLPWLQPGQTLPEFEAQAYRLKKGEM 214 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAI 313 + P+++ G I + DK + +L+ + +K + + + R+ A Sbjct: 215 SLPFLSPAGYHIILLEDKSNFLPYDSLRNDILCFIDQRNLRDKLIDDRLNE-RAQAT 270 >gi|332143233|ref|YP_004428971.1| Parvulin-like peptidyl-prolyl isomerase [Alteromonas macleodii str. 'Deep ecotype'] gi|327553255|gb|AEA99973.1| Parvulin-like peptidyl-prolyl isomerase [Alteromonas macleodii str. 'Deep ecotype'] Length = 264 Score = 76.6 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 75/278 (26%), Gaps = 37/278 (13%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 T+NG+ I+ I + + + K A +I E + ++ +EK Sbjct: 9 ITVNGKTISAAMIDAEVQYHPAESRRQAMVKAAETLIIGELVTQKAMEKGIPL------- 61 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 Q I + + + E E Sbjct: 62 --------------------------NPKSDAIEQNSQLIDSLLASEVCVPEATTEECER 95 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD-CNKLEKF 222 + K T +L + L+++ + ++F Sbjct: 96 YYSANKGTFKTAPLIEASHILIASDPKDLEHRAESHALAVNLIHKLQGGESTLGELAKQF 155 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG- 280 +S G L +F+ + S+ P T+ G + + K D Sbjct: 156 SSCPSKDVDGSLGQLSYGQTVREFERQVFAASEGLMPQPVETRYGYHVVLVARKVDGKPL 215 Query: 281 -EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 ++ + K ++Y+ +L S A I + Sbjct: 216 SFDMVREKIKQYLNDKVHRKALSQYLHRLVSEADIQGF 253 >gi|307565748|ref|ZP_07628217.1| PPIC-type PPIASE domain protein [Prevotella amnii CRIS 21A-A] gi|307345574|gb|EFN90942.1| PPIC-type PPIASE domain protein [Prevotella amnii CRIS 21A-A] Length = 466 Score = 76.6 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 27/285 (9%), Positives = 73/285 (25%), Gaps = 20/285 (7%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEI 90 + + + E I ++ + + G+ E + +++ V+ L + Sbjct: 33 ISKKNIIDEVIWVVGDEPILRSEVEITKLQGEAEGTKWAGDPEYLIPEQIAVQKLFLHQA 92 Query: 91 EKSGITFDSNTVNYFFVQHARNTG--LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 +T + + Q + Q +Q L +V Sbjct: 93 ALDSLTITESEIYQGVEQQINYWISLPQIGSKERLEEFQHKSLAQIRQDLHDDYKNRQLV 152 Query: 149 KN---DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + + E+ K+ ++ + + + + + Sbjct: 153 QKMQEKLVSDIKVSPSEVRTYFNKIPIDSIPIVPTQVEVEILTQTPKIEVEEINRIKNQL 212 Query: 206 EESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKKSQN--NTT 258 + R+ E A G+ ++ + L P F + + Sbjct: 213 RDYTNRINNGETTFETLARLYSEDPGSARQGGELGFIGRASLDPAFAGAAFNLTDPKKIS 272 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 ++ G I + DKR + K+ + + Sbjct: 273 KIVESEFGYHIIQLIDKRGDKIN------VRHILLKPKVSQAAID 311 >gi|91202358|emb|CAJ75418.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 318 Score = 76.6 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 83/289 (28%), Gaps = 13/289 (4%) Query: 29 PIVSYKSWAMSSR-IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 IV + + + +NG+ IT ++ + + A+ LI TL Sbjct: 33 SIVLVSKESKEDKDVVAIVNGQKITSNELYELL--------LSTYGNEALDVLIRRTLIN 84 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 QE K GI+ + V + + ++ + K +++ + Sbjct: 85 QEARKHGISLTTKEVENKINTLVQREVNALLQTYKIENEADLDKELEKIGASLKEFKDKL 144 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 K L E K + + +++ + + ++ + E+ Sbjct: 145 TKRLVKEAEIELRAEKVVMKTISVSEEDLQEAYKSIYGEKIEAQQIVLKTKREAEEALEK 204 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 RL + + GK D +++ + T G Sbjct: 205 LRLGADITKMAKAQSIDRASASRDGKMLPFSPED--DIGKSVAHLKPGELSGIINTNYGY 262 Query: 268 EYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + I ++ +K L K + ++ L +A I Sbjct: 263 HIVKITGRKTGSDKKFDTVKKELEELVREKKYRERLRPWLVNLVESASI 311 >gi|291483469|dbj|BAI84544.1| molecular chaperone [Bacillus subtilis subsp. natto BEST195] Length = 294 Score = 76.6 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 89/306 (29%), Gaps = 45/306 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + I + + + + +T G++ + Sbjct: 1 MKKIAIAAITATSILALSACSSGDKEVIAKTDAGDVTKGELYTNMK--------KTAGAS 52 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +L+ E + + + D + L+KQ D Sbjct: 53 VLTQLVQEKVL---------DKKYKVSDKEIDNKLKEYKTQLGDQYTALEKQYGKDY--- 100 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 L Q + + + + EI + +K ++ Sbjct: 101 --LKEQVKYELLTQKAAKDNIKVTDDEIKEYWEGLKGQIRASHI---------------L 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD---LHPQFQNLLK 251 +K ++ E+ + K +++++ + G+ ++ + + + K Sbjct: 144 VADKKTAEEIEKKLKKGEKFDALAKEYSTDTGSATNGGELGWISKDNEQLDSTFRKAAFK 203 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLR 309 N ++P TQ G I ++R G +K L ++ K+ E V+K+ Sbjct: 204 LKTNEVSDPVKTQFGYHIIKKTEER--GKYDDMKKELKSEVLEQKLNDSNAVQEAVQKVM 261 Query: 310 SNAIIH 315 A I Sbjct: 262 KKADIE 267 >gi|86153246|ref|ZP_01071450.1| foldase protein PrsA [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612905|ref|YP_001000297.1| major antigenic peptide PEB4 [Campylobacter jejuni subsp. jejuni 81-176] gi|167005249|ref|ZP_02271007.1| major antigenic peptide PEB4 [Campylobacter jejuni subsp. jejuni 81-176] gi|143955293|sp|A1VYV6|CBF2_CAMJJ RecName: Full=Cell-binding factor 2; AltName: Full=Major antigen peb4A; Flags: Precursor gi|85842972|gb|EAQ60183.1| foldase protein PrsA [Campylobacter jejuni subsp. jejuni HB93-13] gi|87250443|gb|EAQ73401.1| major antigenic peptide PEB4 [Campylobacter jejuni subsp. jejuni 81-176] Length = 273 Score = 76.6 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 34/299 (11%), Positives = 92/299 (30%), Gaps = 35/299 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 +++ + +++ T+NG+ I+D ++S+ A + + L + LI Sbjct: 4 FSLVAAALIAGVALNVNAATVATVNGKSISDAEVSEFFAPMLRGQDFKTLPDNQKKALIQ 63 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + + I + + + A + Sbjct: 64 QYIMQDLILQDAKKQNLEKD---------------------------PLYTKELDRAKDA 96 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 I +V + + ++ A + K+ V+ ++ + K + + Sbjct: 97 ILVNVYQEKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKG 156 Query: 203 KDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTN 259 +E + ++ + G+ + +S + F + +N TT Sbjct: 157 LKGKELDAKFS---ELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTT 213 Query: 260 PYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P T G I + + +K + + +K + + L ++A + Y Sbjct: 214 PVKTNFGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEY 272 >gi|260909468|ref|ZP_05916172.1| peptidyl-prolyl cis-trans isomerase [Prevotella sp. oral taxon 472 str. F0295] gi|260636393|gb|EEX54379.1| peptidyl-prolyl cis-trans isomerase [Prevotella sp. oral taxon 472 str. F0295] Length = 474 Score = 76.6 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 29/291 (9%), Positives = 75/291 (25%), Gaps = 34/291 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 + + ++ + A TING I+ + + ++K V + + Sbjct: 5 ALSVALLFCAFVAHAQDDPTIMTINGRPISRSEFEYSYN---KNNTDNVVDKKTVAQYVD 61 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + ++ + +T F + A D + Sbjct: 62 LFVNYKLKVEAALAARLDTTQAFRNEFADYRDQQVRPSFVTSDDMEKAARQLYDDTRQRV 121 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + +L + Q + RI Sbjct: 122 ----------------------------DGQGGLIRVAHIMLMLPQKASKEAQNRAELRI 153 Query: 203 KDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260 + R K + G+ +L + +F++ + P Sbjct: 154 DSIYNALKRGADFATLARKLSDDKGSAQQGGELPWLQKGQTLKEFEDAAFALKPGEISKP 213 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRS 310 ++ G I + ++R ++KA + A + E+ + ++ Sbjct: 214 VLSPAGYHVIKLIERRMFLPYDSVKADILAYIEQSGMREQIIDNKLNEMAK 264 >gi|321314718|ref|YP_004207005.1| molecular chaperone lipoprotein [Bacillus subtilis BSn5] gi|320020992|gb|ADV95978.1| molecular chaperone lipoprotein [Bacillus subtilis BSn5] Length = 294 Score = 76.6 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 90/306 (29%), Gaps = 45/306 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + I + + + + +T G++ + Sbjct: 1 MKKIAIAAITATSILALSACSSGDKEVIAKTDAGDVTKGELYTNMK--------KTAGAS 52 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +L+ E + + + D + L+KQ D Sbjct: 53 VLTQLVQEKVL---------DKKYKVSDKEIDNKLKEYKTQLGDQYTALEKQYGKDY--- 100 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 L Q + + + + EI + +K ++ Sbjct: 101 --LKEQVKYELLTQKAAKDNIKVTDDEIKEYWEGLKGQIRASHI---------------L 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES--DLHPQFQNLLKK 252 +K ++ E+ + K +++++ + G+ ++ + L F+ K Sbjct: 144 VADKKTAEEIEKKLKKGEKFDALAKEYSTDTGSATNGGELGWISKDNEQLDATFRKAAFK 203 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLR 309 N ++P TQ G I ++R G +K L ++ K+ E V+K+ Sbjct: 204 LKTNEVSDPVKTQFGYHIIKKTEER--GKYEDMKKELKSEVLEQKLNDSNAVQEAVQKVM 261 Query: 310 SNAIIH 315 A I Sbjct: 262 KKADIE 267 >gi|270263574|ref|ZP_06191843.1| putative protease maturation protein [Serratia odorifera 4Rx13] gi|270042458|gb|EFA15553.1| putative protease maturation protein [Serratia odorifera 4Rx13] Length = 627 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 39/399 (9%), Positives = 103/399 (25%), Gaps = 88/399 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + + +++ F + +VSY+ A +NG+VI + + Sbjct: 1 MMDNLRAAANHVVLKIILGLIILSFLLTGVVSYQGSAG--DYAAKVNGQVIERAQLEQAF 58 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + ++ A+ +LI L Q +K G++ + V Sbjct: 59 QSERSRMQQQLGDQFSALAGNEGYMQQMRHQALSQLIDNMLLDQYAKKLGLSVSDDQVKD 118 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 N + + + G ++F Q + Q + V++ Sbjct: 119 AIRKAPYFQTNGQFDNAKYLDLISRMGYTADNFAQSMRQQLVNQQVIQAFGQSGFVLPSE 178 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 K + E+ + KN + ++ Sbjct: 179 SQGMAALVLQERNVRLATLDLKALQAKQTVTDDELKDYYSQNKNSFIAPEQVKVSYIPLD 238 Query: 185 ---------------------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 N Q + + + Sbjct: 239 AASMQDKVTVADADISAYYDQHKSSYGQPERKNYSVIQLKTEAEANAVLDELKKGGDFAT 298 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK- 275 ++ ++ I + G+ +L + + + + + G + + D Sbjct: 299 LAKEKSTDIISRRTGGELGWLEPETTADELKQANLTEKGQLSGVVKSSVGYLVVRLNDIA 358 Query: 276 -RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ ++ Q K +K+ A Sbjct: 359 PEKVKPLSEVRDDIAKQVKQEKAVDAYYALQQKVSEAAT 397 >gi|228951513|ref|ZP_04113619.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228808220|gb|EEM54733.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 290 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 94/304 (30%), Gaps = 41/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + +++ N + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYEQMK-------NSQTGKQ 52 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + + +QGI + K Sbjct: 53 TLNNMVMEKVLIKNYKVEDKDVDKKFD--------EMKKQYGDQFDTLMKQQGIKEETIK 104 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q V+ K + E + K +I V++ Sbjct: 105 NSVRAQLAQEKAVEQSITDKDLKAKFEDYKKEIKASHILVKD------------------ 146 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 ++ K ++ + ++++ G + + +F+ +K Sbjct: 147 ---EETAKKVKDELAQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEEAAQKLK 203 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRSN 311 + + P TQ G I + D KA + K + + + + K Sbjct: 204 KGEVSEPVKTQFGYHIIKVTDNHADATFDKAKADIKKALVQEKTQDAQFMNDLMMKEIKK 263 Query: 312 AIIH 315 A + Sbjct: 264 ADVK 267 >gi|157414878|ref|YP_001482134.1| major antigenic peptide PEB4 [Campylobacter jejuni subsp. jejuni 81116] gi|157385842|gb|ABV52157.1| cell binding factor2 (major antigen PEB4A) [Campylobacter jejuni subsp. jejuni 81116] gi|307747515|gb|ADN90785.1| Cell-binding factor 2 [Campylobacter jejuni subsp. jejuni M1] Length = 273 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 34/299 (11%), Positives = 92/299 (30%), Gaps = 35/299 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 +++ + +++ T+NG+ I+D ++S+ A + + L + LI Sbjct: 4 FSLVAAALIAGVALNVNAATVATVNGKSISDTEVSEFFAPMLRGQDFKTLPDNQKKALIQ 63 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + + I + + + A + Sbjct: 64 QYIMQDLILQDAKKQNLEKD---------------------------PLYTKELDRAKDA 96 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 I +V + + ++ A + K+ V+ ++ + K + + Sbjct: 97 ILVNVYQEKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKG 156 Query: 203 KDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTN 259 +E + ++ + G+ + +S + F + +N TT Sbjct: 157 SKGKELDAKFS---ELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTT 213 Query: 260 PYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P T G I + + +K + + +K + + L ++A + Y Sbjct: 214 PVKTNFGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEY 272 >gi|241589917|ref|YP_002979942.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii 12D] gi|240868629|gb|ACS66288.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii 12D] Length = 278 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 32/311 (10%), Positives = 83/311 (26%), Gaps = 55/311 (17%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 T + + ++ +S + T+NG IT + + +A + + Sbjct: 8 TLATAAGLMLLAASHAWADGLPAS-VVATVNGTPITQAQLDRAVAQTGAGANP-NVVQAL 65 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 Q+LI L +Q+ K+ V + Sbjct: 66 KQQLIARELFRQQAAKNPAYEKQPAVQQAV-----------------------------K 96 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 +I +K++ E + ++ +EY R + Q Sbjct: 97 EAHDAAITQLWLKDNIRPSPVTDEQVKARYDAIVASLGDKEYKARVIQVGDDVTASQVIA 156 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL---------LESDLH-PQF 246 +++ +++++ + G+ ++ + P Sbjct: 157 QLKQ-----------GGDFAKLAQQYSTAPNKARGGEMDWVSFKVPVEDGKTQSMPLPLA 205 Query: 247 QNLLKKSQNNTT-NPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAE 303 + + P + + R + A+K + ++E+ + Sbjct: 206 HEITTLQPGAVSAAPVDAGNQRFIVKVDSVRPTQVPAFDAVKPAIKQALETAELERATVQ 265 Query: 304 YVKKLRSNAII 314 V L A + Sbjct: 266 VVGGLLKTAKV 276 >gi|15595896|ref|NP_249390.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas aeruginosa PAO1] gi|254239075|ref|ZP_04932398.1| hypothetical protein PACG_05257 [Pseudomonas aeruginosa C3719] gi|9946581|gb|AAG04088.1|AE004505_9 probable peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas aeruginosa PAO1] gi|126171006|gb|EAZ56517.1| hypothetical protein PACG_05257 [Pseudomonas aeruginosa C3719] Length = 314 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 68/245 (27%), Gaps = 6/245 (2%) Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++A EL + ++ ++ + + + + L + + ++ Sbjct: 55 QVAPDELKALLAEVPAETRAQLSENRDAMERWMRARLAEKALYEQASAQDWQQRPQVKTL 114 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + + + + E+ A Q K L R I + Sbjct: 115 IDAAARQIVLRTYLESVSTVPEDYPSDAELQAAYQANKAQLAVPALYRVSQIFIAASAAG 174 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD--LHPQFQNLL 250 +KR ++ K + + G LL L L Sbjct: 175 GLAEARKRAQELYRQAADG-DFAELARKHSDDPQTARNGGDIGGLLAQAQLLPAIRPALE 233 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + P G + + ++RD ++ L + E+ Y+ L Sbjct: 234 RLKVGAVSEPIQGANGFHLVKLTERRDARLATLDEVRGRLRESLRAQRQEQIAKAYLDGL 293 Query: 309 RSNAI 313 +NA Sbjct: 294 VNNAT 298 >gi|332882741|ref|ZP_08450352.1| PPIC-type PPIASE domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679243|gb|EGJ52229.1| PPIC-type PPIASE domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 463 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 32/292 (10%), Positives = 76/292 (26%), Gaps = 15/292 (5%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--INGELEKIAVQELIVETLKKQE 89 + + + +I + DI K LK Q+ + +L+ + L + Sbjct: 34 AQSERKKVDGVAAVVGDYLILESDIDKAYIDLKQQEVDTKNITRCQMLGKLMEDKLYAHQ 93 Query: 90 IEKSGITFDSNTVNYFFVQH-----ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 + + V Q A+ G + + L + Sbjct: 94 AVQDSVKLTDAEVREQVNQRIEYLTAQLGGDIKKLLEFYKKDDEQSMREELFTLFKVNTL 153 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 ++ + E+ + + + I N + VQK I Sbjct: 154 AQRMRQQIVKDVEVTPEEVRNFFNAIPADERPHFGTELEIAQIVVNPVAPPSAVQKVIDL 213 Query: 205 AEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESD--LHPQFQNLLKKSQNNTTNP 260 + + + ++ A + G+ + + + P Sbjct: 214 LNDIKKDVEENGMSFATKAILYSQDRATGGQLLTFNRNSAFDKAFKDVAFTLREGEISKP 273 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSN 311 + + G I + R G+ ++ P + E + K+R Sbjct: 274 FESSFGWHIIQMDKIR---GKEVSVRHILIMPDIPQEALDEAKEKIAKIRDR 322 >gi|269468957|gb|EEZ80538.1| Parvulin-like peptidyl-prolyl isomerase [uncultured SUP05 cluster bacterium] Length = 613 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 38/395 (9%), Positives = 107/395 (27%), Gaps = 83/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M S + ++ L + + F + I Y S+ I +I+G+ I+ D Sbjct: 1 MLSSIRNKTKGWLAYLIVGLITVPFALFGINEYF-TGTSNIIVASIDGDEISKEDFLNEF 59 Query: 61 ALLKLQKIN-----------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ- 108 K + L++ +++++ L Q + S + Sbjct: 60 NPQKRRLQQRLSERYDTEFDAVLKQSVMRDMVNRRLLSQFSDGLDYATTSVELQAMIQSN 119 Query: 109 --HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------------- 149 + S + + L G ++ + + Sbjct: 120 DLFQVDGKFSIDTYQKLLRLNGYSTAEYESIKLKELTQSQIKYNFLDSAFITPSALKNLQ 179 Query: 150 --NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 ND K+ ++++ K+K + + + + + + Sbjct: 180 ALNDQQRKFSYIQIDADNYLDKVKVNVKSVKDFYNNQKASFFDPQKVKIDFVELSLEKIA 239 Query: 208 SRLRLPKDCNK-----------------------------------------LEKFASKI 226 +++ D K A + Sbjct: 240 KNIKINDDELFNFYEDEKDRFTTEGERKAQHILVQTQETAKKVVGLINAGGDFAKLAKEY 299 Query: 227 HDVSI-----GKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRD--L 278 + + G + + + P+F+ + + + ++ G I + + + Sbjct: 300 SEDTGSKDDAGDLGFFTKGVMVPEFETKVFGMQEGEVSGAVKSEFGYHIIKLNKIKPGSV 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ L+ T +++K + +L + A Sbjct: 360 KSFESARSELTKLYTQNQVQKSLYDLTDQLANLAY 394 >gi|315637986|ref|ZP_07893171.1| SurA domain protein [Campylobacter upsaliensis JV21] gi|315481834|gb|EFU72453.1| SurA domain protein [Campylobacter upsaliensis JV21] Length = 298 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 93/296 (31%), Gaps = 32/296 (10%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 I+ ++ V+ + + + + + E IT+ DI + + LLKL + A+ LI Sbjct: 30 ILMILLFFVAIVNAKVLNSVALVVEKEPITNYDIEQTMKLLKL------PREQALAVLIN 83 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E ++ +I++ I + V+ + ++ E F + L +G F+ L Sbjct: 84 EKMELSQIKQFSIVVNELEVDAAISKILTQNKMNLEQFKNSLKAKGQNYELFRHNLKKDL 143 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + + E + Y V +++ + + Sbjct: 144 EKRKLYEKIASMNKTDFSEESAKKFFEANKEKFLFYTSIDVKIYRSNDQAILEKMKADKK 203 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 + + L L + + Sbjct: 204 ITLKAQNVNLNPHNAD------------------------PRLLALLSQLKIGEFSPVLN 239 Query: 263 TQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +++G E + K ++ +K + + + + +Y KLRS I Y Sbjct: 240 SKEGFELYEVMAKGGANVPEFEQIKDSVMNVYFNEQRQNYIQDYFDKLRSKLNIEY 295 >gi|325266978|ref|ZP_08133648.1| cis-trans isomerase [Kingella denitrificans ATCC 33394] gi|324981478|gb|EGC17120.1| cis-trans isomerase [Kingella denitrificans ATCC 33394] Length = 317 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 34/318 (10%), Positives = 101/318 (31%), Gaps = 17/318 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMS----SRIRTTINGEVITDGDISKRIALLKLQ----- 66 + L +V + + A + I IN +IT DI + + K + Sbjct: 1 MKPIRTLAAAVLVGLSLQTAGAAEIKPLNSIAIEINSSIITYRDIERVVREFKSRPGNKD 60 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 +L + A L+ L + ++ + A + ++ + Sbjct: 61 IPEAQLVQAAKNTLVERALLADAARAQDLKATPAGIDAELERRAAAGKTTVQNIYAQAAA 120 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-----REYLIR 181 G ++ +A + +++N + ++ A +++ + Sbjct: 121 LGYTREAYRTEVAKDLLITYMLQN-LNSNIKITDEQVQAALNELQAKGQAPTGEPYTVYT 179 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + Q+ V +RI+ + + ++++ ++ + G + + Sbjct: 180 IRRVILNAANQQHMPAVGQRIQQIATAIAQGSDFGAVAQRYSQEVQAANQGLHDNITDMM 239 Query: 242 LHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEK 299 L + + T P + + + R ++ + E+ Sbjct: 240 LPENVEAALHQLQPGQITPPLRAGNSWQIVQLIGARTENDPAKMQREAVRRMLVRQAQER 299 Query: 300 HEAEYVKKLRSNAIIHYY 317 ++A+++ +L+ A++ Y Sbjct: 300 NQAQFMAQLQQMAVVREY 317 >gi|254244936|ref|ZP_04938258.1| hypothetical protein PA2G_05813 [Pseudomonas aeruginosa 2192] gi|126198314|gb|EAZ62377.1| hypothetical protein PA2G_05813 [Pseudomonas aeruginosa 2192] Length = 314 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 68/245 (27%), Gaps = 6/245 (2%) Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++A EL + ++ ++ + + + + L + + ++ Sbjct: 55 QVAPDELKALLAEVPAETRAQLSENRDALERWMRARLAEKALYEQASAQDWQQRPQVKTL 114 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + + + + E+ A Q K L R I + Sbjct: 115 IDAAARQIVLRTYLESVSTVPEDYPSDAELQAAYQANKAQLAVPALYRVSQIFIAASAAG 174 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD--LHPQFQNLL 250 +KR ++ K + + G LL L L Sbjct: 175 GLAEARKRAQELYRQAADG-DFAELARKHSDDPQTARNGGDIGGLLAQAQLLPAIRPALE 233 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + P G + + ++RD ++ L + E+ Y+ L Sbjct: 234 RLKVGAVSEPIQGANGFHLVKLTERRDARLATLDEVRGRLRESLRAQRQEQIAKAYLDGL 293 Query: 309 RSNAI 313 +NA Sbjct: 294 VNNAT 298 >gi|296273396|ref|YP_003656027.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Arcobacter nitrofigilis DSM 7299] gi|296097570|gb|ADG93520.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Arcobacter nitrofigilis DSM 7299] Length = 297 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 92/299 (30%), Gaps = 9/299 (3%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 +++ + +VS S +S I +NG +T L Q L K+ + L+ Sbjct: 4 LVYTLSIVVSLFSSTYASDILAVVNGGNVTSEVAPNNFKTLDNQIQKNILNKLIEKRLVS 63 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + K +I KS N + K G + Sbjct: 64 DYALKTDIVKSEEYKKVLKHILKMSDENDNKEGNENLADIVKQKSIKGYTQEQLNSKKGL 123 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + D + + + E+ + I ++ ++ I Sbjct: 124 LAFDFLLTQKAEQLLPSDKELEKYYNDRRYKYDTPAQIEL-----LSIVVEKLSLAKEII 178 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT--TNP 260 K + ++ L + +K++ + G + S L+ + +LK + P Sbjct: 179 KKLQNAKDILQEFSILAKKYSLAPTAKNSGYFGKIPLSVLNSELSPILKDKKRGFFTNKP 238 Query: 261 YVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 T+ G E I + +K + + ++ +K+L+ A+I Y Sbjct: 239 IKTEFGYEIFYILNDIPEYNSTFEGVKDKVKEEYVKKTVKTWAINKIKELKEKAVIKIY 297 >gi|228988998|ref|ZP_04149028.1| hypothetical protein bthur0001_56200 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228770720|gb|EEM19255.1| hypothetical protein bthur0001_56200 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 299 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 96/311 (30%), Gaps = 37/311 (11%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + +K L + + + S + I+ ++ R+ Sbjct: 1 MKSSVKQLIMTGLAVGSLTFVSGCSLFDSDSVEYAAKTDSGTISKDELYNRMV------- 53 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 ++ + + +LI T+ +++ + S D L +E +SF D Sbjct: 54 -DKIGQRTLDDLITLTVLQKKYKVSDGEIDDEIKR-----------LKSEFGNSFNDFLS 101 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + ++ L + + + + ++ A ++ IR + Sbjct: 102 QNGVNNEEQLKDVIKLDKLKQKLALEHLKIQDKDLKALY------EQKKPEIRVSHILVS 155 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQ 247 D L + + ++F+ G Y E D+ FQ Sbjct: 156 DETLAKDIKSK---------IDSGEDFGSLAKEFSQDIATKEKGGDIGYFKEGDMVQAFQ 206 Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH-EAEYV 305 + +K + P T+ G I + D++ L +K L ++ K+++ + Sbjct: 207 DAARKLKVGEVSQPVKTEFGYHVIKLLDEKKLPSFEQMKPQLQSELISNKMDQAKINAEI 266 Query: 306 KKLRSNAIIHY 316 +KL I Sbjct: 267 QKLLDKDNIKI 277 >gi|207722835|ref|YP_002253270.1| ppic-type peptidyl-prolyl cis-trans isomerase protein [Ralstonia solanacearum MolK2] gi|206588019|emb|CAQ18600.1| ppic-type peptidyl-prolyl cis-trans isomerase protein [Ralstonia solanacearum MolK2] Length = 278 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 35/318 (11%), Positives = 89/318 (27%), Gaps = 57/318 (17%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 F + L L++F + +S+ + T+NG IT + + +A Sbjct: 3 RLFPRKLAAAAGLMLFAASQAWA---DGLSAGVVATVNGTPITQAQLDRAVAQTGAGANP 59 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + + Q+LI L +Q+ K+ V Sbjct: 60 -NVVQALKQQLIARELFRQQAAKNPAYDKQPAVQQAV----------------------- 95 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + +I +K++ E + ++ +EY R + Sbjct: 96 ------KETHDAAITQLWLKDNIKPVPVTDEQVKARYDAIVASLGDKEYKARVIQVGDDV 149 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL---------LES 240 Q +++ +++++ + G+ ++ Sbjct: 150 TASQVIAQLKQ-----------GGDFAKLAQQYSTAPNKARGGEMDWVSFKVPLEEGKTQ 198 Query: 241 DLH-PQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTK 296 ++ P + + + P + + R + A+K + + Sbjct: 199 NMPLPLAREISTLQPGAVSAAPVEAGSQRFIVKVDSVRPTQVPAFDAVKPAIRQALETAE 258 Query: 297 IEKHEAEYVKKLRSNAII 314 +E+ + V L A + Sbjct: 259 LERATVQVVGGLLKTAKV 276 >gi|223940711|ref|ZP_03632550.1| PpiC-type peptidyl-prolyl cis-trans isomerase [bacterium Ellin514] gi|223890638|gb|EEF57160.1| PpiC-type peptidyl-prolyl cis-trans isomerase [bacterium Ellin514] Length = 373 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 92/344 (26%), Gaps = 43/344 (12%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYK-----------------SWAMSSRIRTTINGEVITD 53 F+K T VL+ V V++ S + ++ G + Sbjct: 2 KFMKSKKTLGVLLAAATVASVAFAVTDNKPASTNASSTPKLSDLLPDQVIVKGKGFELKQ 61 Query: 54 GDISKRIALLKLQK----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + + ++ +K ++K + LI L K + + + Sbjct: 62 SQLDEAVSGVKANASARGQEIPPAQLEMIQKKLLDRLIQIQLFKAKATDADKAEGKKEGD 121 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 F + L KQ + L + I + K + ++ Sbjct: 122 NRFEMIKKR-----APSEDMLAKQLKTMGLTVESLHSRLIEEATAEAVLKSKVKISDDQV 176 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE--------ESRLRLPKD 215 +R I + + + + K A+ + Sbjct: 177 KKFYNDNPKDFEEPEQVRASHILISTSDQKTGSEMSEDQKKAKKKQAEDLLKRAKAGEDF 236 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICD 274 ++F+ G + P+F+ N ++ T G I + + Sbjct: 237 GKLAKEFSEDPGSKDKGGEYIFPRGKMVPEFEAAAFSLQTNQVSDIVTTPFGYHIIKLSE 296 Query: 275 KRDLGGEIALK--AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K K + ++EK ++ K+L+ + + Sbjct: 297 KIPPHKVELAKVQDDIKGYLEKQEMEKVLPDFYKELKKESNVQI 340 >gi|323343304|ref|ZP_08083531.1| hypothetical protein HMPREF0663_10066 [Prevotella oralis ATCC 33269] gi|323095123|gb|EFZ37697.1| hypothetical protein HMPREF0663_10066 [Prevotella oralis ATCC 33269] Length = 475 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 31/292 (10%), Positives = 83/292 (28%), Gaps = 34/292 (11%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 +F + + + A TI G+ +T + G ++K +V E + Sbjct: 6 LFAAMLLFAGVVHAQVDPTIMTIGGQPVTRSEFEYSYN---KNNAEGVIDKKSVDEYVDL 62 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + + + +T++ F + A Q Sbjct: 63 FVNYKLKVMAAEAAHLDTLSSFKQEFATYRD-------------------------QQIR 97 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + D + + + M + ++ Q ++R+ Sbjct: 98 PAMITNADVEAEAWRIYSQAQHRVDSMGGLVKPA---HILIGIPQKASQAEQDAAKQRVD 154 Query: 204 DAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPY 261 + +K++S + G+ ++ + +F + + + + P+ Sbjct: 155 SIYNILKKDGDFAELAKKYSSDVASARNGGELPWIEKGQTLKEFDEKIFSMKKGELSKPF 214 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNA 312 +T G + + DK +L+A + ++ + L A Sbjct: 215 LTPAGYHIVILKDKGKFFPYDSLRADILKFIDQRGLRDEIINHRLDSLAKAA 266 >gi|229167152|ref|ZP_04294895.1| Foldase protein prsA 1 [Bacillus cereus AH621] gi|228616386|gb|EEK73468.1| Foldase protein prsA 1 [Bacillus cereus AH621] Length = 283 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 83/306 (27%), Gaps = 49/306 (16%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 F+ I V + + + + + +T+ ++SK L+ L ++ Sbjct: 4 KKLFMGTIIACVALTLSACGSSENVATSKVGN--VTEKELSKE---LRQTYGKSTLSQMM 58 Query: 77 VQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + + L+ + E K + + F GL ED K Sbjct: 59 LNKALLDKYKVSDEEAKKQVEAAKEQMGDKFKVALEQVGLKNED-------------ELK 105 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + ++ K + + Sbjct: 106 ERMKPEIALEKAIRATVTDKDVKDNHKPEMKVSHILVKD--------------------- 144 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 +K K+ +E ++++ G+ +F+ K Sbjct: 145 ---EKTAKEVKEKINNGEDFTALAKQYSEDTVSKEQGGEIAGFAPGQTVKEFEEAAYKLD 201 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLR 309 + P T G I + DK++L +K + +++ ++ + L Sbjct: 202 AGQVSEPIKTSYGYHIIKVTDKKELKPFDEVKDTIRKDLEQQRLQDATGKWKQQVINDLL 261 Query: 310 SNAIIH 315 A I Sbjct: 262 KEADIK 267 >gi|119897859|ref|YP_933072.1| putative peptidyl-prolyl cis-trans isomerase [Azoarcus sp. BH72] gi|119670272|emb|CAL94185.1| putative peptidyl-prolyl cis-trans isomerase [Azoarcus sp. BH72] Length = 631 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 19/167 (11%), Positives = 41/167 (24%), Gaps = 8/167 (4%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 + + + + E+ A + R I + + V K + Sbjct: 234 LDEAALAKQVKVSDEEVRAFYDGNPGRFGQPEERRARHILIQVDAGAPEAEVAKAKAAID 293 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSI-----GKAQYLLESDLHPQFQNLLKKSQNNTTNPY 261 E L KD + E A S G + + F++ P Sbjct: 294 EIAATLAKDPGRFEALAKASSQDSGSAARGGDLGFFGRGAMVKPFEDAAFGQAKGVVGPV 353 Query: 262 -VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + G I + D + + + ++ + Sbjct: 354 VRSDFGFHIIQVTDIKPAT--TRSLDSVRGEIVDELRKQAAGRRFAE 398 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 13/162 (8%), Positives = 42/162 (25%), Gaps = 15/162 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M V + + + ++I F + +Y ++G IT + + + Sbjct: 1 MFDAVRN--NKRVAQIILALLIIPFAFFGLDAYFKDGPGGGEVAVVDGAPITAAEFDRAL 58 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + + N L + ++ ++ + L + + + Sbjct: 59 RERQDRLRNEMGGPVDSALLESPALRRAVLETMVSQRLLARYAADRHMVVTPQQLQETIA 118 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 + D + + A + + + Sbjct: 119 AVEAFHENGQFSLQRYQDVLRAQNMTPAGFEARLAQDVRIQQ 160 >gi|107100164|ref|ZP_01364082.1| hypothetical protein PaerPA_01001186 [Pseudomonas aeruginosa PACS2] Length = 314 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 68/245 (27%), Gaps = 6/245 (2%) Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++A EL + ++ ++ + + + + L + + ++ Sbjct: 55 QVAPDELKALLAEVPAETRAQLSENRDALERWMRARLAEKALYEQASAQDWQQRPQVKTL 114 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + + + + E+ A Q K L R I + Sbjct: 115 IDAAARQIVLRTYLESVSTVPEDYPSDAELQAAYQANKAQLAVPTLYRVSQIFIAASAAG 174 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD--LHPQFQNLL 250 +KR ++ K + + G LL L L Sbjct: 175 GLAEARKRAQELYRQAADG-DFAELARKHSDDPQTARNGGDIGGLLAQAQLLPAIRPALE 233 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + P G + + ++RD ++ L + E+ Y+ L Sbjct: 234 RLKVGAVSEPIQGANGFHLVKLTERRDARLATLDEVRGRLRESLRAQRQEQIAKAYLDGL 293 Query: 309 RSNAI 313 +NA Sbjct: 294 VNNAT 298 >gi|149924928|ref|ZP_01913258.1| peptidylprolyl cis-trans isomerase [Plesiocystis pacifica SIR-1] gi|149814196|gb|EDM73809.1| peptidylprolyl cis-trans isomerase [Plesiocystis pacifica SIR-1] Length = 397 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 85/316 (26%), Gaps = 47/316 (14%) Query: 41 RIRTTINGEVITDGDISKRI-----ALLKLQKI-------NGELEKIAVQELIVETLKKQ 88 + T+ I D R LL+ + + + LI L Sbjct: 72 EVLATVGDRSIPKADFLARYEPEATKLLERRDDGKVPDAYQAMQREKIIDALIWSELMAL 131 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 E E+SG+ + + D++++L++ G + ++ Sbjct: 132 EAERSGVDVSPEKLAEEEGKQKA----HVADWNAWLERIGQTPEIRQAMTRDYLRERALI 187 Query: 149 KNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + E E+ K +T + + R F I + +Q Sbjct: 188 EAR-KGPIEATEEELRAAYDESIKAGRLTAPQPMARASHFLITYGPREGDEKIQPVPFKQ 246 Query: 206 EESRLR------------------------LPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 E + +++ G ++ Sbjct: 247 REETDQAVKDEWKAKAKARAEALRELAQQPGVDFNEFCREYSEGPGAYRGGDMGLFPQTQ 306 Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIE 298 + + ++ + P + KG I + + + G A++A L Q K++ Sbjct: 307 MIKAYADVAFSLEIGVLSEPVESDKGYYVIKVFGRYEAGDLPFEAVRADLVRQVEGQKLQ 366 Query: 299 KHEAEYVKKLRSNAII 314 K+L + Sbjct: 367 MGREALRKELEERFTV 382 >gi|299144111|ref|ZP_07037191.1| PPIC-type PPIASE domain protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518596|gb|EFI42335.1| PPIC-type PPIASE domain protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 253 Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 32/285 (11%), Positives = 70/285 (24%), Gaps = 47/285 (16%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQELIVETLKKQEIEKS 93 M ++ ++G IT D + + L Q +G+ +K + ELI + L + ++ Sbjct: 1 MEKKVLAIVDGNEITMDDFNFFMESLNPQVRAYFTDGDKKKEIIDELIYQELLYLDAIEN 60 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + D V A + + Sbjct: 61 KLDEDEEFVTVSERTKAS-------------------------------LLKTYALGKLL 89 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 E EI + + D N + L Sbjct: 90 ENVSPSEKEIEEFYNANAEHYDVPNSVDASHILVEDENKAN---------ELYNKILAGE 140 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAI 272 + + + G + +F + + + + P T G I + Sbjct: 141 NFEELAKNNSMCPSKNNGGNLGVFHSGQMVREFDEKVFSMKEGEISEPVKTNFGFHIIKL 200 Query: 273 CDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++ + + K +K +++L I Sbjct: 201 NKIIPSKKHTLSEVRDDVIKEVKRYKEQKIYMNKIRELSQKHNIK 245 >gi|229160113|ref|ZP_04288114.1| Foldase protein prsA 1 [Bacillus cereus R309803] gi|228623324|gb|EEK80149.1| Foldase protein prsA 1 [Bacillus cereus R309803] Length = 287 Score = 76.3 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 88/305 (28%), Gaps = 46/305 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + +++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKDEFYEQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKEVDKKYD--------EMKKQYGDQFDTLLKQQGIKEETLK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q ++ K + + Sbjct: 104 TGVRAQLAQEKAIEKTITDKELKENYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G + + +F++ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEDAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 ++ + P +Q G I + D ++ K + + K + + + + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFDQSKDEIKKEIVQKKAQDGEFMNDLMMKEIK 259 Query: 311 NAIIH 315 A + Sbjct: 260 KADVK 264 >gi|332971078|gb|EGK10048.1| peptidyl-prolyl cis-trans isomerase [Desmospora sp. 8437] Length = 337 Score = 76.3 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 32/327 (9%), Positives = 100/327 (30%), Gaps = 33/327 (10%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIV---------------SYKSWAMSSRIRTTINGEVITD 53 ++ + + + F+ + + + S ++ G +T+ Sbjct: 1 MNKRLLTVLSAFLAVSLLVAGCGTKDDKNGQETAKDGQATVLPTDSKKVVAEYEGGKVTE 60 Query: 54 GDISKRIALLKLQKIN-------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 G+++ + ++ L + E++K V+ I E + + ++ + Sbjct: 61 GELNTYLNIMALFQPQMAAMMEAPEVKKEIVKNYIAEQMVAKRVKNGKKYEKQAEESMKQ 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + + + G + Q N + + E Sbjct: 121 FEEQLKQMPAEGKDKDKKKQDLEGYLKEHGFTKGQLKDFLEKNNKVSAYFEDRVNEKDLK 180 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKL-----QNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 KQ K+ +R +L S ++ ++ + R + ++ K +K Sbjct: 181 KQYNKSDDFYNIKLRHILISTTEDPEGKKKKRSDKDAKARAEKVKKELEGGKKFSEMAKK 240 Query: 222 FASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 ++ G+ + + + + +K + ++P + G I + +++ L Sbjct: 241 YSDDPGSKAQGGEMEGTPDQWVPEFSKAAVKTPIDKISDPIKSDYGYHIIQVTERKKLS- 299 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + K+ + ++K Sbjct: 300 ----FDKVKEEMMGQKVTELYQAFIKD 322 >gi|32474370|ref|NP_867364.1| peptidyl-prolyl cis-trans isomerase [Rhodopirellula baltica SH 1] gi|32444908|emb|CAD74910.1| probable peptidyl-prolyl cis-trans isomerase [Rhodopirellula baltica SH 1] Length = 395 Score = 76.3 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 29/272 (10%), Positives = 72/272 (26%), Gaps = 17/272 (6%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQ------EIEKSGITFDSNTVNYFFVQ-- 108 + +KL+ L + ++ E + ++ Sbjct: 96 EDELHYVKLRMTRSLLVQTIQSRMLREAFLLEQVGTAAADKRREAEATMAAKARQMFYET 155 Query: 109 -----HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + S + L K+G ++ Q + +++ EI Sbjct: 156 ELPGLMKKANVDSKAELDDLLRKEGSSLAFRQREFMDQMLGSLYIRSKVNKDPAVSLSEI 215 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 Q+ ++ + R ++ + + K I + L + + Sbjct: 216 VRYYQEHQSKYEHKARARWEQLTVMFSNHPTRDAAMKAITEMGREALYGGNMQAVAKAKS 275 Query: 224 SKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + S G + + L Q + + I + ++ D G Sbjct: 276 EEPFASSGGLHDWTNQGSLVSAILDQQIFSLPTGKMSEIIEDTDAYHIIRVLEREDAGVT 335 Query: 282 I--ALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 L+ +S KI + E + ++R Sbjct: 336 PVGELQDDISDILRQQKIRADQEEVMVEVRQR 367 >gi|148652482|ref|YP_001279575.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter sp. PRwf-1] gi|148571566|gb|ABQ93625.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter sp. PRwf-1] Length = 317 Score = 76.3 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 34/279 (12%), Positives = 78/279 (27%), Gaps = 44/279 (15%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 +NG VI I++ + L +A Q L+V L K + Sbjct: 60 VRVNGVVIDKQAIAQELQYHPAPTKEDALF-LATQALVVRELLKNAVLDDD--------- 109 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM-LKYGNLEME 162 + D+++ + E Sbjct: 110 --------------------------TLGQAAWEANEEQAISDLIEKNVTASTPDGDTCE 143 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL----PKDCNK 218 + K T +R +L + + + ++K+ + E + Sbjct: 144 RYYEQNKADYKTAPIMSVRHILLASLPEDGEERLALKKQAYELIEQINNSTNADAEFIEL 203 Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRD 277 ++++ G+ L + P+F++++ P T+ G + + DK+ Sbjct: 204 ARQYSACPSKEQGGELGVLTQGQTVPEFESVVFSMDEGLAPSPVETRYGFHIVQVLDKQP 263 Query: 278 --LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + K ++ + +Y+ L A I Sbjct: 264 GVQLDYLQAKPAIANKLAQQAFHHGLCDYLYTLAEQAEI 302 >gi|329962622|ref|ZP_08300570.1| PPIC-type PPIASE domain protein [Bacteroides fluxus YIT 12057] gi|328529653|gb|EGF56551.1| PPIC-type PPIASE domain protein [Bacteroides fluxus YIT 12057] Length = 523 Score = 76.3 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 23/304 (7%), Positives = 75/304 (24%), Gaps = 42/304 (13%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 S + ++ + ++ A + ING+ + + Sbjct: 3 SKMMTMVKSGLAILFLL----SGLAVIAQPDPVLMRINGKEVFRSEFEYACRQNGKLADG 58 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 ++ + + N L + + Sbjct: 59 VRKQRQDL-----------------------------LDWFVNFKLKVAEAEAAGLDTAE 89 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 Q + + + + + + + + S+P Sbjct: 90 VFRSRLDSCRRQLVKSYLTDEETNERVAR-----RFYDKMKSGRRAGQVRVSHIYKSLPQ 144 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 N + D+ L + + D ++ + +F+ + Sbjct: 145 NISGYTLRKVEAKMDSIYESLGKGATAAAFDAYVKDFSDDKT--TFWVRWLQMPAEFEEV 202 Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKK 307 + P+ T +G+ + + +++ + +K + + ++K V+K Sbjct: 203 AFDLQPGEISRPFFTPQGIHIVKVLERKAVPPFDEVKEEMIRCRTRRHGMDKGTEALVEK 262 Query: 308 LRSN 311 L+ Sbjct: 263 LKQE 266 >gi|301054383|ref|YP_003792594.1| peptidylprolyl isomerase [Bacillus anthracis CI] gi|300376552|gb|ADK05456.1| peptidylprolyl isomerase [Bacillus cereus biovar anthracis str. CI] Length = 280 Score = 76.3 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 83/305 (27%), Gaps = 44/305 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + V+ + +S + S I TT +G I++ D +K++ K Sbjct: 1 MKRKKIVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKKLK--------ENYGK 51 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E++VE + + + + E + + Sbjct: 52 QNLSEMVVEKVLNDKYKATDEEVT---------------KQIKELKTKMGNNFNTYMESN 96 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + F E + L++ Sbjct: 97 GVKNEDQLKEKLKLTFAFEKAIKATVTEKEIKDHYKPKLQASHILVK------------- 143 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 +K K+ +E ++++ G + +F++ K Sbjct: 144 ---DEKTAKEIKEKLNNGEDFAALAKQYSEDPGSKEKGGDLSEFGPGMMVKEFEDAAYKL 200 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 + P + G I + K++L K + + +I+ + + + + Sbjct: 201 EVGQVSEPIQSSFGYHIIKLTGKKELKPYEEEKVNIRKELEQQRIQDPQFHQQVTRDILK 260 Query: 311 NAIIH 315 NA I Sbjct: 261 NADIK 265 >gi|89891028|ref|ZP_01202536.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteria bacterium BBFL7] gi|89516672|gb|EAS19331.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteria bacterium BBFL7] Length = 453 Score = 76.3 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 25/284 (8%), Positives = 76/284 (26%), Gaps = 15/284 (5%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGEL-EKIAVQELIVETLKKQEIEKSGITFD 98 + + VI + DI K+I ++ + GEL + ++ ++ E + + IT Sbjct: 33 DGVSGVVGDYVILNSDIKKQILEIQGDQDLGELSDCQLIESILREKMFAHHAVQDSITVS 92 Query: 99 SNT----VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 + G + + ++ Sbjct: 93 DQEVEAETDQRIAYFKGILGSDEAVLKKYQKSSMPELRSALNRITRDMKLAQRMQQRITE 152 Query: 155 KYGNLEMEIPANKQKMKNI----TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + E+ + E + ++ ++ + V K + + Sbjct: 153 EVEITPEEVREFFYDLPEDERPLFNTEVEMAQIVVKPKPSEDAIKDVVDKLNEYRTDVLE 212 Query: 211 RLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVE 268 K F+ + G +F+ ++ + P+ T G Sbjct: 213 NGASFAAKAALFSEDVATERQGGIISLKRGDPFVKEFKEAAFSLTEGEVSEPFETVFGWH 272 Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIE-KHEAEYVKKLRSN 311 + + + ++ ++ + + + + ++R Sbjct: 273 ILKVEKVKGQVRDV---RHILLYPYISVAQVNDAKQKLDEMRDR 313 >gi|30250138|ref|NP_842208.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas europaea ATCC 19718] gi|30139245|emb|CAD86118.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas europaea ATCC 19718] Length = 630 Score = 76.3 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 27/257 (10%), Positives = 75/257 (29%), Gaps = 10/257 (3%) Query: 61 ALLKLQKINGELEKIAVQ----ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 A+ + + + + ++ +IV ++ T + + Sbjct: 145 AMFEARVAGELMRQQLLEGITGSVIVPRTVAGKVASLSATMYEINRMTISPEQYIDQAEP 204 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 E D + + ++ + + + + + E+ ++ + + Sbjct: 205 DEAAIQSYYDSHYQDFTLPERVKVEYVVLSLDELARQEQISDEEIRKYYDEHQDEFGQAE 264 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDA--EESRLRLPKDCNKLEKFASKI-HDVSIGK 233 E +L S+P + + Q K + E+ R K + + G Sbjct: 265 ERRASHILLSVPADATEEQKTSTKARAEQILEQVRQDPEKLPELAAELSEDPGSAKEGGD 324 Query: 234 AQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSA 290 + + F++ + + P T G I + + + D+ G +K + Sbjct: 325 LGFFARGLMVKPFEDEVFQMQRGEIRGPVETPFGFHIIRLTEVKGADVAGLDDVKEQIRQ 384 Query: 291 QNTPTKIEKHEAEYVKK 307 K+ E + Sbjct: 385 LLQHQKVADRFGELSED 401 >gi|116048605|ref|YP_792596.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas aeruginosa UCBPP-PA14] gi|115583826|gb|ABJ09841.1| probable peptidyl-prolyl cis-trans isomerase, PpiC [Pseudomonas aeruginosa UCBPP-PA14] Length = 314 Score = 76.3 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 68/245 (27%), Gaps = 6/245 (2%) Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++A EL + ++ ++ + + + + L + + ++ Sbjct: 55 QVAPDELKALLAEVPAETRAQLSENRDALERWMRARLAEKALYEQASAQDWQQRPQVKTL 114 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + + + + E+ A Q K L R I + Sbjct: 115 IDAAARQIVLRTYLESVSTVPEDYPSDAELQAAYQANKAQLAVPALYRVSQIFIAASAAG 174 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD--LHPQFQNLL 250 +KR ++ K + + G LL L L Sbjct: 175 GLAEARKRAQELYRQAADG-DFAELARKHSDDPQTARNGGDIGGLLAQAQLLPAIRPALE 233 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + P G + + ++RD ++ L + E+ Y+ L Sbjct: 234 RLKVGAVSEPIQGANGFHLVKLTERRDARLATLDEVRGRLRESLRAQRQEQIAKAYLDGL 293 Query: 309 RSNAI 313 +NA Sbjct: 294 VNNAT 298 >gi|188534628|ref|YP_001908425.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Erwinia tasmaniensis Et1/99] gi|188029670|emb|CAO97549.1| Peptidyl-prolyl cis-trans isomerase D [Erwinia tasmaniensis Et1/99] Length = 622 Score = 76.3 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 27/373 (7%), Positives = 89/373 (23%), Gaps = 85/373 (22%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------- 69 F + + Y + +NG+ I+ + + + + ++ Sbjct: 23 SFVLTGVGGYLTGGSGDY-AAKVNGQEISRAQLERAFSSERARQQQMLGEQFSVLASNEG 81 Query: 70 --GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT---GLSAEDFSSFL 124 ++ + + +LI E L Q + G+T + + + S + Sbjct: 82 YMQQMRQQTLSQLIDEVLLTQYAKDIGLTIGDDQIKQAIFTQPAFQTAGQFDNAKYLSII 141 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVV----------------------KNDFMLKYGNLEME 162 + G + + + L Q ++ + + + Sbjct: 142 NNIGFSADQYAEALRKQLTTQQLINAVTKTDFVLGNEADSLAALVSQQRLVREVTIDVNA 201 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA----------------- 205 + A + + Y + + + + Sbjct: 202 LAAKQDVTQEEISNYYQQHQSSLMSSEQFRVSYIKMDAAAMEQAVSESDIQSWYEKHQDD 261 Query: 206 -----------------------EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD 241 +S + ++ + + G +L Sbjct: 262 YTQPQRNRYSIIQTNTEAEARSVLDSLKKGDDFAKLAKEKSVDPISARNGGDMGWLEPQT 321 Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEK 299 + + K + + + G + + + + + ++A+ K Sbjct: 322 TPDELKGASLKEKGQLSGVITSSPGFIIARLDETQPEKVKPLSEVHDDIAAKLKQEKAVA 381 Query: 300 HEAEYVKKLRSNA 312 + +K+ A Sbjct: 382 AFYKLQQKVSDAA 394 >gi|253999544|ref|YP_003051607.1| EpsD family peptidyl-prolyl cis-trans isomerase [Methylovorus sp. SIP3-4] gi|253986223|gb|ACT51080.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Methylovorus sp. SIP3-4] Length = 305 Score = 76.3 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 27/306 (8%), Positives = 74/306 (24%), Gaps = 50/306 (16%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKINGELEKI 75 L+ + + S ++ ++G+ I+ +++ I + + + K Sbjct: 7 LALGLLSVTLFGCGKSDNKPESGQVAAKVDGKEISLLQLNQVIKNVPNVSEDNVDAIRKQ 66 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + LI + L + V+ Sbjct: 67 ILDRLIDQQLILNKAYDEKFERTPEVVSAI------------------------------ 96 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + +I V K E+ + + + + +I Sbjct: 97 ETAKRDAITRAYVSKLVATKVKPGNQEVKTYFETHPELFTQRRVYNLQDIAIAPGANLPG 156 Query: 196 GFVQK----RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + + L+ ++ + +LK Sbjct: 157 DLAAQVEKSKGMQDVAEWLKAGGVKFGASSYSK-------------PAEQIATDALAVLK 203 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + P V + + K + + T T+ ++ + + +++ Sbjct: 204 NLKGGEIVPLTMDGNVHVVKLIGAVPAPMDFNQAKPLILSYLTNTQGQQLIKQELARMKE 263 Query: 311 NAIIHY 316 NA I Y Sbjct: 264 NAKIEY 269 >gi|224824986|ref|ZP_03698092.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lutiella nitroferrum 2002] gi|224602657|gb|EEG08834.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lutiella nitroferrum 2002] Length = 340 Score = 76.3 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 13/110 (11%), Positives = 33/110 (30%), Gaps = 3/110 (2%) Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVT 263 +E R K + + + G + + F+++ + + T Sbjct: 10 KEVRANPAKFAELAKTRSQDPGSAANGGDLGFFGRGAMVKPFEDVAFRMQPGQISELVET 69 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + G + + + + A+K + + K +KL A Sbjct: 70 EFGFHILKLDEVKQ-PVFAAVKGEVEQRLKRQKAAAQFRAASEKLGELAY 118 >gi|47565690|ref|ZP_00236730.1| peptidyl-prolyl cis-trans isomerase [Bacillus cereus G9241] gi|47557326|gb|EAL15654.1| peptidyl-prolyl cis-trans isomerase [Bacillus cereus G9241] Length = 283 Score = 76.3 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 88/309 (28%), Gaps = 50/309 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 + L +++ + S + T + +T+ ++SK L+ + L Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQKYGESTLY 55 Query: 74 KIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + + L+ + E K + + + F GL ED Sbjct: 56 QMVLSKALLDKYKVSDEEAKKKVEEAKDKMGENFKATLEQLGLKNED------------- 102 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K+ + + + +K K + + Sbjct: 103 ELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD------------------ 144 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ +E ++++ G+ +F+ Sbjct: 145 ------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEEAAY 198 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306 K + P T G I + DK++L +K + +++ ++ V Sbjct: 199 KLDAGKVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQVVN 258 Query: 307 KLRSNAIIH 315 L +A I Sbjct: 259 GLLKDADIK 267 >gi|293606739|ref|ZP_06689092.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC 43553] gi|292814889|gb|EFF74017.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC 43553] Length = 352 Score = 76.3 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 29/258 (11%), Positives = 59/258 (22%), Gaps = 24/258 (9%) Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 R+ +L L A Q+L + ++ AR G + Sbjct: 77 RVERDELLGQLQTLPPQARQQLQDNRA------GMEQWLRARLAEKALIEQARAQGWQDQ 130 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 Q + + +++ G + + Sbjct: 131 ----------PEIRRAVQAAEERIVVQSYLESVSRAPDGYPTDADLQAAYERAKPQLAVP 180 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-----SIGK 233 V L + V K A E R A G Sbjct: 181 AQYHVSQIFLPAPLGDADAVAATRKQALELTKRAQAPKADFAALAQAHSRDETSRAQGGD 240 Query: 234 AQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSA 290 ++ + L P+ + + + + P + G + + R + L Sbjct: 241 IGFVPLAQLTPEMRPVIEQMKAGEVSAPVQSAAGFHILKLTALRPASVTPFEQVSPQLRT 300 Query: 291 QNTPTKIEKHEAEYVKKL 308 + E Y++ L Sbjct: 301 ALRSQRQELAARAYMEGL 318 >gi|310639515|ref|YP_003944273.1| ppic-type peptidyl-prolyl cis-trans isomerase [Paenibacillus polymyxa SC2] gi|309244465|gb|ADO54032.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus polymyxa SC2] Length = 372 Score = 76.3 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 87/312 (27%), Gaps = 20/312 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRI----------RTTINGEVITDGDISKRIALLK 64 + + + + I + + A +++ T G IT+ + ++ I+++K Sbjct: 11 RMLSLGMAALLAISVLAACTKQADENKVKDEPKDNSKVVVTYKGGTITENEFNQEISMMK 70 Query: 65 LQKINGELE---KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 E ++++ + + + + + S + Sbjct: 71 FLYPEYEAALASDQVREQIVKQEVVYKLLAAKADDKAKEEGAKQGNEQLEQYKKSVGEDK 130 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 +Q + V N K + +++ K K + T + Sbjct: 131 F--KTFLSDQKLTEQGVKDYFTRVMTVINSETNKVTDDQLKQEFEKNKDQFTTATVRHVL 188 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 K + + K K+ + +K++ + G + + Sbjct: 189 INFEDPKTKKQRTKEATLKLAKEVKAKLDGGADFATIAKKYSEDPGSASNGGLYENASVA 248 Query: 241 DLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY---LSAQNTPTK 296 P F+ + N P T+ G I + + + + L + Sbjct: 249 QWVPAFKEAAETQPINKIGEPVETEYGYHVIKVESRNEPTFDKLKDNEKAALKNKLAGES 308 Query: 297 IEKHEAEYVKKL 308 I+ + KL Sbjct: 309 IQNFTENDLTKL 320 >gi|237746606|ref|ZP_04577086.1| peptidyl-prolyl cis-trans isomerase [Oxalobacter formigenes HOxBLS] gi|229377957|gb|EEO28048.1| peptidyl-prolyl cis-trans isomerase [Oxalobacter formigenes HOxBLS] Length = 647 Score = 76.3 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 47/161 (29%), Gaps = 8/161 (4%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + ++ + ++ ++ R I K + + K AEE + Sbjct: 243 VEKNVKISDADLQSYYEQNRDRFSIPEERRAQHILIAVAKNASDSEKAEAKKKAEELLAQ 302 Query: 212 LPK----DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQK 265 L + + + G + + F + + + ++P T Sbjct: 303 LKADPSRFAELAKAHSQDPGSARNGGDLGFFTRGKMVKPFNDAVFGMKKGEISDPVQTDF 362 Query: 266 GVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEY 304 G IA+ D + +K + + + K AE Sbjct: 363 GYHLIAVTDIKPAVAKPLSQVKDSVLQELKRQETSKKFAEM 403 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 17/166 (10%), Positives = 42/166 (25%), Gaps = 18/166 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +++ F++ F V + YK + +NG+ IT + Sbjct: 1 MLDFIRSH-KRLTQIILLVFIIPSFIFVGVEGYKRFGDGDA-VAKVNGKAITQQEWDNAQ 58 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + +Q LI + + K +T V Sbjct: 59 REQAERFRQRAAVQGQPFDSKWIESSQFKWAVLQNLINRRVLLATLNKEHLTVPEQVVLQ 118 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 + G + + + ++ Sbjct: 119 KIREIPGLIGPDGKLNEARYKEVLAAQGLNPDMHFALMTQDMAMQQ 164 Score = 37.0 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 24/248 (9%), Positives = 59/248 (23%), Gaps = 6/248 (2%) Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 ++ E +++ +K ++ + + + A + D Sbjct: 382 QVKDSVLQELKRQETSKKFAEMSETFSNMVYEKPDSLKPVADALKLTVHTFPNLARDPAV 441 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 P +++ F + A + + + P K+++ Sbjct: 442 AARQNPLLADPKILQAIFSDDAVKGKHNTEAVEVSPQVLVAARIAKHYPAELTPFEKVKS 501 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH-----PQFQNL 249 Q + A + K S G + + Sbjct: 502 VVKAQVTNEKAMALAKAAGEAELARLKEGGAPSGFSPGLLVSRQKITMAGRSDLAPVMKA 561 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDK-RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + G I + L+ +S Q T ++ A Y+ L Sbjct: 562 DVSKLPAYVGVEMAPNGYIIYRITRVVTPEKTDGKLREAMSRQMTNVMAQQDLAAYMNYL 621 Query: 309 RSNAIIHY 316 + A + Sbjct: 622 KQEAKVEI 629 >gi|288818385|ref|YP_003432733.1| hypothetical protein HTH_1074 [Hydrogenobacter thermophilus TK-6] gi|288787785|dbj|BAI69532.1| hypothetical protein HTH_1074 [Hydrogenobacter thermophilus TK-6] gi|308751978|gb|ADO45461.1| conserved hypothetical protein [Hydrogenobacter thermophilus TK-6] Length = 276 Score = 75.9 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 87/311 (27%), Gaps = 49/311 (15%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL-------LKLQKIN 69 FVLI +V + +N IT ++ L + + Sbjct: 1 MALFVLITLLMVGFSYAN-------VVAKVNQRSITREEVISAFNAYWRGIIHLPIAQAT 53 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + + E + + +QE +K GI + + ++ Sbjct: 54 KRDMQEFLVEYVRSLIIQQEAKKMGINVKESEFKEYITKNI---------------GNVP 98 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 ++ + + + ++ + EI A Sbjct: 99 LSETVRELVKTEILTNKILD-RIAKDIDVSDREITAYYYLNLRDFK-------------- 143 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 L Q V++ + + ++ + +K + + V G + L + Sbjct: 144 --LPAQVLVRRVLVEDLDTANEVYYRLSKGAESLEGLRGVKEGDPMWYSIQTLPEIVKQQ 201 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 T+ P T G + + D+R + K + + K ++ ++ + Sbjct: 202 LYPYEVGKTSKPIDTGSGYLILKVIDRRGDGILSLEEAKPVVKEKLLKEKRQEVFKKWFQ 261 Query: 307 KLRSNAIIHYY 317 K+ + ++ Sbjct: 262 KVSKEYRVEFF 272 >gi|153951254|ref|YP_001398165.1| major antigenic peptide PEB4 [Campylobacter jejuni subsp. doylei 269.97] gi|152938700|gb|ABS43441.1| major antigenic peptide PEB4 [Campylobacter jejuni subsp. doylei 269.97] Length = 273 Score = 75.9 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 34/299 (11%), Positives = 92/299 (30%), Gaps = 35/299 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 +++ + +++ T+NG+ I+D ++S+ A + + L + LI Sbjct: 4 FSLVAAALIAGVALNVNAATVATVNGKSISDTEVSEFFASMLRGQDFKTLPDNQKKALIQ 63 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + + I + + + A + Sbjct: 64 QYIMQDLILQDAKKQNLEKD---------------------------PLYTKELDRAKDA 96 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 I +V + + ++ A + K+ V+ ++ + K + + Sbjct: 97 ILVNVYQEKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKG 156 Query: 203 KDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTN 259 +E + ++ + G+ + +S + F + +N TT Sbjct: 157 LKGKELDAKFS---ELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTT 213 Query: 260 PYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P T G I + + +K + + +K + + L ++A + Y Sbjct: 214 PVKTNFGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEY 272 >gi|228957422|ref|ZP_04119177.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802255|gb|EEM49117.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 287 Score = 75.9 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 89/305 (29%), Gaps = 46/305 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + ++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYNQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QG+ + FK Sbjct: 52 VLNNMVMEKVLIKNYKVDDKEVDKKFDETK--------KQVGDQFDTLLKQQGLKEETFK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 L Q ++ K + + Sbjct: 104 NMLRAQLAQEKAIEKTITDKELKDNYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G + + +F++ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEDAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRS 310 ++ + P +Q G I + D ++ KA + + K++ + + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKELVAKKVQDGAFMNDLMMKEIK 259 Query: 311 NAIIH 315 A + Sbjct: 260 KADVK 264 >gi|257459731|ref|ZP_05624840.1| foldase protein PrsA 2 [Campylobacter gracilis RM3268] gi|257443156|gb|EEV18290.1| foldase protein PrsA 2 [Campylobacter gracilis RM3268] Length = 274 Score = 75.9 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 84/303 (27%), Gaps = 44/303 (14%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGD-----ISKRIALLKLQKINGELEKIAVQ 78 I + + ++++ + T IT D + Q+ + +K + Sbjct: 4 ILSFSFVAAMAISSLNAGVLATAKDANITITDEDVAPFLAQGMQHGGQEPTADEKKKLID 63 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 +LI L E +KSGI + L Sbjct: 64 DLIKYKLLIAEAKKSGIENSDEYKHQL-------------------------------EL 92 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 A I ++ + + + E + K ++ + + D K Sbjct: 93 AKDGIAFNLWQREQAKDVSVSDEEAKKIYDENKQNFMQPDSVTASHILVADEKAAKNAIA 152 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNN 256 + E + K ++ + + G + + P+F+ Sbjct: 153 KLSKVKKENLKEEFNK---LAKEISIDPSAKENGGDLGSFGKGMMVPEFEKAAFALKDGE 209 Query: 257 TTN-PYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + P TQ G I + + +K + Q P+K+ K + +L Sbjct: 210 MSKTPVKTQFGYHVIYKESSKKAETMPFEKVKDLIKNQLLPSKVNKKIDDKANELFGKLN 269 Query: 314 IHY 316 I Y Sbjct: 270 IEY 272 >gi|319790371|ref|YP_004152004.1| SurA domain protein [Thermovibrio ammonificans HB-1] gi|317114873|gb|ADU97363.1| SurA domain protein [Thermovibrio ammonificans HB-1] Length = 436 Score = 75.9 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 101/327 (30%), Gaps = 30/327 (9%) Query: 1 MTSKVFTSLSDF---IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS 57 M SK+ +L F + ++ FV IF + S+ + S T+NG+ IT + + Sbjct: 1 MLSKIRKNLRAFSIPLWIVAASFVGTIFLVWGRGSFSGPSGSQ--VATVNGQPITLAEFN 58 Query: 58 KRIA------------LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 + ++++IA+Q L+ L + ++ G+ V Sbjct: 59 REYKTVEDELRRKLGDNFNKLVKPNDIKRIALQRLVQRALLIELAKEEGLKVSDWAVAKA 118 Query: 106 FVQH---ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + N S + + +FL QG+ F++ + + V+ + E Sbjct: 119 IEEMPIFQENGKFSVKLYKAFLRAQGLTPQAFEETVRKDLLVQKVL-TVVNHAPSVTQAE 177 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + +K Y + T P + K+ K+ E Sbjct: 178 LTELYKKSFGQRKIGYKVFTADQFNPKVSEEEVEQFYKKHKEQFTKEAGEEVYLLSFENT 237 Query: 223 ASK-------IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIA-ICD 274 G+ + L + L K + ++ G +A Sbjct: 238 PQGKERAKEAYELAKKGELEKLKAFN-PKPAPEKLAKELQKRPFIFRSENGRLILAFKLK 296 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHE 301 K + +KA + Q K + Sbjct: 297 KSETVPLEKVKAQIEEQLKEEKALELA 323 >gi|296390946|ref|ZP_06880421.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas aeruginosa PAb1] Length = 314 Score = 75.9 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 68/245 (27%), Gaps = 6/245 (2%) Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++A EL + ++ ++ + + + + L + + ++ Sbjct: 55 QVAPDELKALLAEVPAETRAQLSENRDAMERWMRARLAEKALYEQASAQDWQQRPQVKTL 114 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + + + + E+ A Q K L R I + Sbjct: 115 IDAAARQIVLRTYLESVSTVPEDYPSDAELQAAYQANKAQLAVPALYRVSQIFIAASAAG 174 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD--LHPQFQNLL 250 +KR ++ K + + G LL L L Sbjct: 175 GLAEARKRAQELFRQAADG-DFAELARKHSDDPQTARNGGDIGGLLAQAQLLPAIRPALE 233 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + P G + + ++RD ++ L + E+ Y+ L Sbjct: 234 RLKVGAVSEPIQGANGFHLVKLTERRDARLATLDEVRGRLRESLRAQRQEQIAKAYLDGL 293 Query: 309 RSNAI 313 +NA Sbjct: 294 VNNAT 298 >gi|42780220|ref|NP_977467.1| peptidylprolyl isomerase [Bacillus cereus ATCC 10987] gi|42736139|gb|AAS40075.1| protein export protein prsA [Bacillus cereus ATCC 10987] Length = 287 Score = 75.9 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 87/305 (28%), Gaps = 46/305 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + + + Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYNEMK--------QKGGSQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 +Q +++E + + + D + F + L +QG+ + K Sbjct: 52 VLQSMVMEKVLIKNYKVDEKEVDKKYD--------EMKKQVGDQFDTLLKQQGLKEETLK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + ++ K + + Sbjct: 104 NGVRAELAQDKAIEKTITDKELKENYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G + + +F++ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEDAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 ++ + P +Q G I + D ++ KA + + K + + + + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKELVAKKKQDTQFMNDLMTKEIK 259 Query: 311 NAIIH 315 A + Sbjct: 260 KADVK 264 >gi|218893343|ref|YP_002442212.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas aeruginosa LESB58] gi|218773571|emb|CAW29385.1| probable peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas aeruginosa LESB58] Length = 314 Score = 75.9 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 68/245 (27%), Gaps = 6/245 (2%) Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++A EL + ++ ++ + + + + L + + ++ Sbjct: 55 QVAPDELKALLAEVPAETRAQLSENRDALERWMRARLAEKALYEQASAQDWQQRPQVKTL 114 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + + + + E+ A Q K L R I + Sbjct: 115 IDAAARQIVLRTYLESVSTVPEDYPSDAELQAAYQANKAQLAVPALYRVSQIFIAASAAG 174 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD--LHPQFQNLL 250 +KR ++ K + + G LL L L Sbjct: 175 GLAEARKRAQELYRQAADG-DFAELARKHSDDPQTARNGGDIGGLLAQVQLLPAIRPALE 233 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + P G + + ++RD ++ L + E+ Y+ L Sbjct: 234 RLKVGAVSEPIQGANGFHLVKLTERRDARLATLDEVRGRLRESLRAQRQEQIAKAYLDGL 293 Query: 309 RSNAI 313 +NA Sbjct: 294 VNNAT 298 >gi|88658238|ref|YP_507033.1| SurA domain-containing protein [Ehrlichia chaffeensis str. Arkansas] gi|88599695|gb|ABD45164.1| surA domain protein [Ehrlichia chaffeensis str. Arkansas] Length = 395 Score = 75.9 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 109/297 (36%), Gaps = 12/297 (4%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--NGELEKIAVQELI 81 + + I+ + S +I +N E+I++ D+ KRIA+ K E+IA+ LI Sbjct: 8 LLVLFIILYSSNVFASVKIVAMVNDELISNLDLEKRIAINKFFYKVEGNTAEEIALNALI 67 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 E++ +QE K +T + Q L D S+++ QG+ F Q++ + Sbjct: 68 DESIWRQEARKLKVTVTERDLLEAIKQFLVIKNLGNIDLKSYVEAQGLDYKLFVQHMKSK 127 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 +W ++ + E+ ++ M + + + + + + + Sbjct: 128 LLWNKILMLKIAPYIIISDKEVQDSRDNMVGNGLD--ISVHIQEVMLPASMNDNESIISS 185 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY 261 I +S + + + + V++ L + L L + P Sbjct: 186 IISELQSGVSVETIKANRKDVLFEEASVNVKNIDANLANKL-------LNAKIGDVIGPM 238 Query: 262 VTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 ++ G I + + D+ E A L + + K + + L++ A + Sbjct: 239 KSEYGTLIIKLIHRSDINKEFANSNVDLRQMHLNIEQGKEYLDQISILKTKATCENF 295 >gi|261403916|ref|YP_003240157.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. Y412MC10] gi|261280379|gb|ACX62350.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. Y412MC10] Length = 361 Score = 75.9 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 29/315 (9%), Positives = 86/315 (27%), Gaps = 8/315 (2%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIV-SYKSWAMSSRIRTTINGEVITDGDISKR 59 M S+ + FI +T + + + + +S++ G IT+ + Sbjct: 1 MPSRNNKAWKTFIVSITAVLSMSMIAACGNDKTKGAEEDNSKVIVKYKGGEITEKEFDLE 60 Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 +++ + E K+ + + + + + Sbjct: 61 QRMIQFMSPEYAQFLQ-MDEFKEYLAKQGVAYEYLYAKADDKAKEAAEKQTDDLLKQQKA 119 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + ++ +++ V+ K E +I K + Sbjct: 120 GMGEEQFKAALESQKLTEDDLKNYMLRVMTVMEHEKNQVTEEDIKKEFDANKKDYTNISV 179 Query: 180 IRTVLFSIPDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 ++ + K K+ + + ++++ + G Sbjct: 180 RHVLIAFQDAEGKERPEGEALKIAKEVQSKLNKGEDFAALAKEYSQDPGSKNSGGLYENK 239 Query: 239 E--SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI---ALKAYLSAQNT 293 S + + L N ++P T G + + + ++ + K + ++ Sbjct: 240 PAGSWVPQFKEKALTLELNKISDPVETDYGYHVMKVEKREEVTYDKLPADQKEGIRSELA 299 Query: 294 PTKIEKHEAEYVKKL 308 KI+ + L Sbjct: 300 SAKIDNFMQNELNNL 314 >gi|40062782|gb|AAR37676.1| peptidyl-prolyl cis-trans isomerase, putative [uncultured marine bacterium 439] Length = 613 Score = 75.9 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 35/390 (8%), Positives = 91/390 (23%), Gaps = 83/390 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + ++ L + + F + I Y S+ +++GE I+ +++ Sbjct: 1 MLGAIRKKSKGWVAYLIVGLITVPFALFGIQEYMG-GSSNSAVASVDGEDISLDYYYQKL 59 Query: 61 ALLKLQKING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 + L + + LI E L + + V F + Sbjct: 60 NTQQRNLQQQLGASYSAEIDNALRQTLIDSLINEKLLENFTNSMKLVTLEEEVRSFIQSN 119 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-------------------- 149 ++ + Y QS + + Sbjct: 120 PVFQVDGVFSEERYIQLLRLNGFTPLAYELEQSKSMSLDQIKRNLNNSAFLSTVQIDQLN 179 Query: 150 ----------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRT-----VLFSIP 188 + + + +I K+ + + ++ L +I Sbjct: 180 DLSAQERDVSFLVLSTEKYKEQIIVDQDQISEYFDNNKSNFIEGHKVQVDFVELSLDNIE 239 Query: 189 DNKLQNQGFVQKRIKDAEES--------------------------RLRLPKDCNKLEKF 222 + ++K + EE Sbjct: 240 QQTNPDNETLRKLYVENEELYTNSEQRRAQHILLEEESNARAILKEIKEGGDFSELARIH 299 Query: 223 ASK-IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG- 279 + G + P+F + + + + T G I + + + Sbjct: 300 SKDITTSEEGGDLGLFERELMVPEFDKAVFDMDVGDISEVVKTDYGYHIIKLNEIQPSTL 359 Query: 280 -GEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++ L + ++ E ++L Sbjct: 360 QSFEEVEGQLLVLHKKNVNQEALYELQEEL 389 >gi|149176439|ref|ZP_01855053.1| probable peptidyl-prolyl cis-trans isomerase [Planctomyces maris DSM 8797] gi|148844791|gb|EDL59140.1| probable peptidyl-prolyl cis-trans isomerase [Planctomyces maris DSM 8797] Length = 369 Score = 75.9 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 29/294 (9%), Positives = 87/294 (29%), Gaps = 32/294 (10%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEI 90 +S + ++ + VI++ ++++ L ++ +I + +Q Sbjct: 60 ISGNQPSARTQPVAKVGSVVISEDELARECIAL--------YGPEVLENVINRAIIEQAC 111 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 +K+G+ + V+ + A+ + + + Q + QY ++ Sbjct: 112 QKAGVNVEQAEVHAEVEKIAKRFN--LDTKTWYEMLQAERKMNPNQYRRNVIWPMLALRK 169 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + ++ R ++ + V+K Sbjct: 170 LAGQRTKLSQDQVQKAF---VRDYGPRVKARMIMMDNLSRAQKVWDEVKKNP-------- 218 Query: 211 RLPKDCNKLEKFASKIHDVSIG----KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG 266 ++ + + ++G E++ ++ K + + Sbjct: 219 --GDFERFARDYSIEPNSRALGGAIQPIPQFSENE--SLWKAAFKLKEGEVSGIVQIGLS 274 Query: 267 VEYIAICDKRDLG---GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 I +C+ R ++ L Q T + ++ A KL+ + Y Sbjct: 275 RYAILLCEGRTEPIVNSIKEVENQLVDQLTEEQTQEAVARVFAKLKEQTRVDNY 328 >gi|283956008|ref|ZP_06373497.1| major antigenic peptide PEB4 [Campylobacter jejuni subsp. jejuni 1336] gi|283792484|gb|EFC31264.1| major antigenic peptide PEB4 [Campylobacter jejuni subsp. jejuni 1336] Length = 273 Score = 75.9 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 34/299 (11%), Positives = 93/299 (31%), Gaps = 35/299 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 +++ + +++ T+NG+ I+D ++S+ A + + L + LI Sbjct: 4 FSLVAAALIAGVALNVNAATVATVNGKSISDTEVSEFFAPMLRGQDFKTLPDNQKKALIQ 63 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + + I + + + A + Sbjct: 64 QYIMQDLILQDAKKQNLEKD---------------------------PLYTKELDRAKDA 96 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 I +V ++ + ++ A + K+ V+ ++ + K + + Sbjct: 97 ILVNVYQDKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKG 156 Query: 203 KDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTN 259 +E + ++ + G+ + +S + F + +N TT Sbjct: 157 LKGKELDAKFS---ELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTT 213 Query: 260 PYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P T G I + + +K + + +K + + L ++A + Y Sbjct: 214 PIKTNFGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEY 272 >gi|327312552|ref|YP_004327989.1| putative phage tail component, N-terminal domain-containing protein [Prevotella denticola F0289] gi|326944288|gb|AEA20173.1| putative phage tail component, N-terminal domain protein [Prevotella denticola F0289] Length = 474 Score = 75.9 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 20/289 (6%), Positives = 78/289 (26%), Gaps = 34/289 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 + + + + ++ + TING+ ++ + +G +++ +V E + Sbjct: 5 ALLSVALLSATMAYGQTDPTIMTINGQPVSRSEFEYSYN---KNNTDGVIDRKSVDEYVP 61 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + ++ + +T+ F + + Q Sbjct: 62 LFVNYKLKVQAALDAHLDTLPAFRKEFLGYRNQQIRPAFITDADVEDEARKIYRDTKQQI 121 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + ++ + + ++ Sbjct: 122 ----------------------------DANGGLWHCAHILIGMGQHTSKEEEAAARQLA 153 Query: 203 KDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNP 260 + + + +++++ + G L + +F+ + T+ P Sbjct: 154 DSIYTALQKGADFADLAKRYSTDTSSAKNGGDLPRLQKGQTVAEFEKAMLTLKPGETSRP 213 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKL 308 ++ G I + L +L++ + ++ + + L Sbjct: 214 VLSPFGFHIIRMIGHESLPPYDSLRSDIMQYIEMRGLRDQIINQRLDSL 262 >gi|157164911|ref|YP_001467478.1| putative periplasmic protein [Campylobacter concisus 13826] gi|112801060|gb|EAT98404.1| putative periplasmic protein [Campylobacter concisus 13826] Length = 276 Score = 75.9 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 94/302 (31%), Gaps = 30/302 (9%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 + + ++ ++ S M + I + E IT ++ L++ E+ A Sbjct: 1 MKKLLFLAAGVLSALNLYSAQMINGIAAIVENEPITLYEV------YSLKEQLKTTEQDA 54 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + LI + L+ +I+ ++ +N A+ G++ F + + QG+ FK Sbjct: 55 LNLLIRDRLEDAQIKNLNLSVTPFELNDRIEAIAKQNGMTNSQFRNSIQAQGMDFLDFKN 114 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 L + + + K+ N+ + + + V+ + + Sbjct: 115 NLEHKMLQEKLYKSIAAEAGKNINEQKAKAYFDANPDKFKVFSTARVVVYRAKDPDLLEA 174 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++ + + + + + Sbjct: 175 QKTSPKLLD----------GVQTQEVSLDYQSID------------PRLAAIISSTNNGD 212 Query: 257 TTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T P + + +K +K + + + EK ++Y +KLR+ A I Sbjct: 213 YTQPLQGPDSFDMFLVKEKIGSYTPSFADVKDNVINELYQGEQEKLMSDYFEKLRAKAKI 272 Query: 315 HY 316 Sbjct: 273 QI 274 >gi|121607668|ref|YP_995475.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verminephrobacter eiseniae EF01-2] gi|121552308|gb|ABM56457.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verminephrobacter eiseniae EF01-2] Length = 374 Score = 75.9 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 41/137 (29%), Gaps = 5/137 (3%) Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESD 241 + + + I+ + + G +L + Sbjct: 219 RIRVRHLLVKEKSPEKRALIEQWLAEAKAGKDFAQLAKDHSEDNASAAQGGDLGFLTDGS 278 Query: 242 LHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKI 297 P F+ LK K + + T G I + ++R G G ++ L Q + Sbjct: 279 TVPPFEQALKALKEPGDLSEVVETSFGYHIIRLEERRPAGLRGFDEMRDPLRLQARNALL 338 Query: 298 EKHEAEYVKKLRSNAII 314 + A+ ++L+ I Sbjct: 339 REARAKDAQRLQEEMQI 355 >gi|306845597|ref|ZP_07478166.1| Chaperone surA precursor [Brucella sp. BO1] gi|306273918|gb|EFM55745.1| Chaperone surA precursor [Brucella sp. BO1] Length = 311 Score = 75.9 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 30/280 (10%), Positives = 78/280 (27%), Gaps = 40/280 (14%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG I + DI + L A + E L ++ Sbjct: 51 AVSVNGVTIDEADILTEAQNHPAENPGAALLSAARALAVRELLLQRAR------------ 98 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 ++ + D + ++ V++ + + E Sbjct: 99 ------------------EIGIEPEHEKDAEGRDETDEDALVRMVIEREVDV-PSASRDE 139 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220 + ++ ++ I + + R + + + Sbjct: 140 AQRYYENNRHRFTNAPILEASHILIAADPADQEARDAARQTATRLAAAVIAEPATFASVA 199 Query: 221 -KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN--PYVTQKGVEYIAICDKR- 276 +++S G L P+F+ L++ T P ++ G + + D+R Sbjct: 200 LEYSSCPSGAQGGNLGQLTRGSTVPEFERALERMTPGETTANPIESRFGFHIVRL-DRRV 258 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ + K ++Y+ L + A I Sbjct: 259 EGEELPFDYVADKIAGWLEASTWSKAVSQYIAILAAEAEI 298 >gi|254514389|ref|ZP_05126450.1| peptidyl-prolyl cis-trans isomerase D [gamma proteobacterium NOR5-3] gi|219676632|gb|EED32997.1| peptidyl-prolyl cis-trans isomerase D [gamma proteobacterium NOR5-3] Length = 622 Score = 75.9 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 41/400 (10%), Positives = 93/400 (23%), Gaps = 88/400 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + ++I F I I S S+ +NGE I+ + + + Sbjct: 1 MLQDIRANAQGTVAKVIIGLIVISFSIFGIESLLFSGGSNG-VAEVNGEEISPFALQQEL 59 Query: 61 ALLK-------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 ++ + ++ + A++ LI + KQ + G+ + Sbjct: 60 SVQQRRLLSILGEDADPALLDQAQMSQQALETLIQREIIKQAAKDMGLNTSDQAIADIVG 119 Query: 108 QHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN-------------- 150 + S + F L G F++ LA + Sbjct: 120 SMEQFQIDGQFSPDLFQGALASAGFTPALFRERLAEDVEIGQLRAGVAGSDFSTEAELDL 179 Query: 151 -------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL------- 184 DF+ + + Q+ E + Sbjct: 180 AASIALEGRDVRYISLPLLDFIASVELSDEAVETFYQQNPERFQSEESVILEYLELGIDA 239 Query: 185 ----------FSIPDNKLQNQGFVQKRIKDAEESR----LRLPKDCNKLEKFASKIH--- 227 + + R + + + + Sbjct: 240 YRKDVDEERLREEFELVRDEFELSAEARVSHILIEGSDADRAERIAAAQKALSEGMSFAD 299 Query: 228 -----------DVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK 275 G Y + + + T+ G + + D+ Sbjct: 300 AAAEFSDDIGSAQDGGDLGYTAGDTFPEAMEEAIAALGVGEQSAAVETEAGTHLLLVTDR 359 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 R+ + A L + V++LR A Sbjct: 360 REGSSVSFEDVAAELEDRIQSRDAAADLLVDVERLRDIAF 399 >gi|294102245|ref|YP_003554103.1| hypothetical protein Amico_1258 [Aminobacterium colombiense DSM 12261] gi|293617225|gb|ADE57379.1| hypothetical protein Amico_1258 [Aminobacterium colombiense DSM 12261] Length = 358 Score = 75.9 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 109/329 (33%), Gaps = 22/329 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIV----SYKSWAMSSRIRTTINGEVITDGDI 56 + + ++ + FVL IF + + K + I+G+ + + Sbjct: 2 LMRSLRENMRWIMFGFVVIFVLSIFGMYGFSGRQRAPKGEGVQDYAVAEIDGKKVMRSTL 61 Query: 57 SKRIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + + + + + + +I+ET + +E G+ ++ Q Sbjct: 62 EANVMNYVERNNVKDVSSNDLMAIRQAVLDGMIIETELAKAVESRGVKASDQEIDDVIKQ 121 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 N + E F L I + + + Q VV+ E+ Sbjct: 122 -ISNQFPTIEAFQKHLSDNDIKMDALRANIGTQLSQQKVVEQA-ASTVVVTPEEVQEFYD 179 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 K K+ R V+++ NK ++ KD + L + ++ +K + Sbjct: 180 KGKDAFFSRPAGRKVVYARFSNKEAADKIYEELKKDGSKWDALLEEVTSEDKKESIGYEA 239 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV-TQKGVEYIAICDKRDLG--GEIALK 285 ++ ES + +F+ L S P T + + + + + Sbjct: 240 PV-----FVPESGMQDKFETLKDLSVGQVAPPIEITSNDIMVVLNKEVLEASTVSFDEVS 294 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + A T K E+ + ++V +L+ NA + Sbjct: 295 NDIKALLTNQKNEEAQMKFVSELKENAKV 323 >gi|330998838|ref|ZP_08322565.1| putative peptidylprolyl isomerase PrsA1 [Parasutterella excrementihominis YIT 11859] gi|329576052|gb|EGG57571.1| putative peptidylprolyl isomerase PrsA1 [Parasutterella excrementihominis YIT 11859] Length = 261 Score = 75.9 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 34/279 (12%), Positives = 81/279 (29%), Gaps = 48/279 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100 T+NG+ I + +A L E + + L+ L +QE K I+ D Sbjct: 24 IATVNGKPIPKSLQDEWVAQLVANGGKDTPEARRQITENLVANALVEQEAAKRKISDDPK 83 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 Y + + +++++ + + Sbjct: 84 VKFAL------------------------------DYAKFRILQEALLRDEMAKHPVSEK 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +++ + +EY + +L QK ++ E+ + Sbjct: 114 EIKARYEEEKAALGNKEYEVSHIL-----------VKDQKTAENIEKKLAAGGNFAALAK 162 Query: 221 KFASKIHDV-SIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGVEYIAICDKRD 277 +F+ + G + + F + + + P T+ G I + D ++ Sbjct: 163 EFSVDTGAKENGGDLGWNRPAVFVKPFADAVKNMKKGEISKAPVKTEFGWHIIKVNDVKE 222 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + Q K + ++ +L I Y Sbjct: 223 VPF--PTYDSVKDQIREGLELKKQQNFLNELMKTNKIEY 259 >gi|115378201|ref|ZP_01465373.1| peptidyl-prolyl cis-trans isomerse domain protein, putative [Stigmatella aurantiaca DW4/3-1] gi|115364789|gb|EAU63852.1| peptidyl-prolyl cis-trans isomerse domain protein, putative [Stigmatella aurantiaca DW4/3-1] Length = 589 Score = 75.9 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 29/318 (9%), Positives = 72/318 (22%), Gaps = 68/318 (21%) Query: 47 NGEVITDGD-----------ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 NG+ I D + R + L + +L+ L Q E+ GI Sbjct: 116 NGKEIPLRDFSRVYAGQLNSLRNRGVPIPESYARQSLPSQVMDQLVTRELLSQAAERHGI 175 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP---DVVKNDF 152 + + ++A +F + + + + Sbjct: 176 NPSDDELRKLIHENADFHKDGQFNFEQYKRALRDYYRTTEPKYEEELRRQLAAQKMLQVV 235 Query: 153 MLKYGNLEMEIP----------------------------------ANKQKMKNITVREY 178 + E+ +K N + Y Sbjct: 236 NSGAVVSDDEVRARYEKDANQAKVVFARFLPTMYAAQVPAPTPAQLEEFRKAHNDEISTY 295 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKD----------------AEESRLRLPKDCNKLEKF 222 + + + + K D +E + Sbjct: 296 YESNRFMYQQAERAKARQILVKLAPDAAAQQKAEAKSRAEALHKEVTEGGKDFATVARER 355 Query: 223 ASKI-HDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + S G ++ + L + + + N + P T+ G + + +K+ Sbjct: 356 SEDPGTKASGGDLGWVERASLEPTLAEAVFALAPNGVSQPIETKLGWHVVKVEEKQAAQD 415 Query: 281 E--IALKAYLSAQNTPTK 296 + ++ + Sbjct: 416 KKLEEAAPEIATTLYKQQ 433 >gi|89095457|ref|ZP_01168368.1| peptidyl-prolyl cis-trans isomerase D, putative [Oceanospirillum sp. MED92] gi|89080287|gb|EAR59548.1| peptidyl-prolyl cis-trans isomerase D, putative [Oceanospirillum sp. MED92] Length = 627 Score = 75.9 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 29/259 (11%), Positives = 70/259 (27%), Gaps = 5/259 (1%) Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-NTGLSAE 118 ++ L + E+ + L+ E+ + + + +F A Sbjct: 148 LSYRALVRKEKLTEQERIAYLLSAFTLSNELNEIATLQNQSRDTRYFTLAAEPERAAQTV 207 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 D + + + + + D E+ A Q+M + + Sbjct: 208 SDDEVADYFAQNSGQYLSDEQVAIEYIVLDRADLEKDVEVTADEVSAAYQQMVDSYQAQE 267 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 L + + + Q + + K + + + G Sbjct: 268 LRQAAHIMVEISDEQEAAAAETKAKALLDRLNAGEDFAAVAQSDSDDPASAEMGGDLGVN 327 Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTP 294 + +F++ L + + P T+ G I + D ++ KA + Sbjct: 328 EKGTFSAEFEDALYALEKGQISEPVQTEFGYHLIKLLDVVESEVPTFEEAKAGIERDLLN 387 Query: 295 TKIEKHEAEYVKKLRSNAI 313 K E + L+ A Sbjct: 388 EKAELEFVAQLDTLKDVAF 406 Score = 57.4 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 44/126 (34%), Gaps = 13/126 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + I + + + F + + S S S T+NGE ++ ++ + + Sbjct: 1 MLQSIRDNSQGIIAKIIVGLIAVTFALFGVESLVSLTGGSNAPATVNGEEVSQQELVQGM 60 Query: 61 ALLKLQK-------------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 L + Q + + + ++ LI + + Q E G+ F ++ V Sbjct: 61 RLQRNQMLSQMGENADPGLLNDNLISSMVLEGLIEQKVLVQSAENQGLVFTDAMIDQLIV 120 Query: 108 QHARNT 113 Sbjct: 121 STKDFQ 126 >gi|221633228|ref|YP_002522453.1| putative post-translocation molecular chaperone [Thermomicrobium roseum DSM 5159] gi|221156643|gb|ACM05770.1| putative post-translocation molecular chaperone [Thermomicrobium roseum DSM 5159] Length = 464 Score = 75.9 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 12/120 (10%), Positives = 33/120 (27%), Gaps = 9/120 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQ 254 ++ + A + + + G +L + F + + Sbjct: 300 ATREAAEQALADIQGGADFATIARERSIDSDTAPNGGDLGWLPRGYMPSAFDEVAFALAP 359 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P TQ G + + ++ LS + + + ++ + R + I Sbjct: 360 GEVGGPVQTQYGWHIVKVLERDPDRP-------LSERMLQALRGQALSRWLDEQRRTSTI 412 >gi|152974691|ref|YP_001374208.1| peptidylprolyl isomerase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023443|gb|ABS21213.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus cytotoxicus NVH 391-98] Length = 285 Score = 75.9 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 30/303 (9%), Positives = 77/303 (25%), Gaps = 45/303 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 T + + +S SS T IT GD K++ K Sbjct: 4 KTLLIATLAIGTFTLSACGAQGSSDAIATSKFSTITKGDFEKQLK--------SRYGKDV 55 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + E++ + + ++ + S + + F + Sbjct: 56 LYEMMAQDIMTKKYKVSNEAVNKEFK-----------KAKEQFGDQFKAVLESNRLKDED 104 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q + ++ +++ + + Sbjct: 105 DFKNQIRFKLAMEQAIKESITEKDIKANYKPEIKASHI--------------------LV 144 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 +++ + ++ ++ + G Y + P+F+ K Sbjct: 145 NNEEKANEIKKKLDEGASFEELAKQESEDPGSKEKGGDLGYFGPGKMAPEFEEAAYKLKV 204 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE---AEYVKKLRSN 311 + P + G I + DK++L +K + +I + + + Sbjct: 205 GEISKPIKSSYGYHIIKLTDKKELKPYNEVKDSIRKNLEKERIADQAIHQKILLNEFK-K 263 Query: 312 AII 314 A I Sbjct: 264 ADI 266 >gi|303256912|ref|ZP_07342926.1| probable parvulin-type peptidyl-prolyl cis-trans isomerase [Burkholderiales bacterium 1_1_47] gi|302860403|gb|EFL83480.1| probable parvulin-type peptidyl-prolyl cis-trans isomerase [Burkholderiales bacterium 1_1_47] Length = 261 Score = 75.9 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 34/279 (12%), Positives = 81/279 (29%), Gaps = 48/279 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100 T+NG+ I + +A L E + + L+ L +QE K I+ D Sbjct: 24 IATVNGKPIPKSLQDEWLAQLVANGGKDTPEARRQITENLVANALVEQEAAKRKISDDPK 83 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 Y + + +++++ + + Sbjct: 84 VKFAL------------------------------DYAKFRILQEALLRDEMAKHPVSEK 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +++ + +EY + +L QK ++ E+ + Sbjct: 114 EIKARYEEEKAALGNKEYEVSHIL-----------VKDQKTAENIEKKLAAGGNFAALAK 162 Query: 221 KFASKIHDV-SIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGVEYIAICDKRD 277 +F+ + G + + F + + + P T+ G I + D ++ Sbjct: 163 EFSVDTGAKENGGDLGWNRPAVFVKPFADAVKNMKKGEISKAPVKTEFGWHIIKVNDVKE 222 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + Q K + ++ +L I Y Sbjct: 223 VPF--PTYDSVKDQIREGLELKKQQNFLNELMKTNKIEY 259 >gi|49085090|gb|AAT51251.1| PA0699 [synthetic construct] Length = 315 Score = 75.5 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 68/245 (27%), Gaps = 6/245 (2%) Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++A EL + ++ ++ + + + + L + + ++ Sbjct: 55 QVAPDELKALLAEVPAETRAQLSENRDAMERWMRARLAEKALYEQASAQDWQQRPQVKTL 114 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + + + + E+ A Q K L R I + Sbjct: 115 IGAAARQIVLRTYLESVSTVPEDYPSDAELQAAYQANKAQLAVPALYRVSQIFIAASAAG 174 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD--LHPQFQNLL 250 +KR ++ K + + G LL L L Sbjct: 175 GLAEARKRAQELYRQAADG-DFAELARKHSDDPQTARNGGDIGGLLAQAQLLPAIRPALE 233 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + P G + + ++RD ++ L + E+ Y+ L Sbjct: 234 RLKVGAVSEPIQGANGFHLVKLTERRDARLATLDEVRGRLRESLRAQRQEQIAKAYLDGL 293 Query: 309 RSNAI 313 +NA Sbjct: 294 VNNAT 298 >gi|329925504|ref|ZP_08280378.1| PPIC-type PPIASE domain protein [Paenibacillus sp. HGF5] gi|328939787|gb|EGG36127.1| PPIC-type PPIASE domain protein [Paenibacillus sp. HGF5] Length = 361 Score = 75.5 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 31/315 (9%), Positives = 87/315 (27%), Gaps = 8/315 (2%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIV-SYKSWAMSSRIRTTINGEVITDGDISKR 59 M S+ + FI +T + + + + +S++ G IT+ + Sbjct: 1 MPSRNNKAWKTFIVSITAVLSMSMIAACGNDKTKGAEEDNSKVIVKYKGGEITEKEFDLE 60 Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 +++ + E K+ + + + + + Sbjct: 61 QRMIQFMSPEYAQFLQ-MDEFKEYLAKQGVAYEYLYAKADDKAKEAAEKQTDDLLKQQKA 119 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + ++ +++ V+ K E +I K + Sbjct: 120 GMGEEQFKAALESQKLTEDDLKNYMLRVMTVMEHEKNQVTEEDIKKEFDANKKDYTNISV 179 Query: 180 IRTVLFSIPDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 ++ + K K+ + + ++++ S G + Sbjct: 180 RHVLIAFQDAEGKERPEGEALKIAKEVQSKLNKGEDFAALAKEYSQDPGSKDSGGLYENK 239 Query: 238 LESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI---ALKAYLSAQNT 293 PQF+ N ++P T G + + + ++ + K + ++ Sbjct: 240 PAGSWVPQFKEKALTLELNKISDPVETDYGYHVMKVEKREEVTYDKLPADQKEGIRSELA 299 Query: 294 PTKIEKHEAEYVKKL 308 KI+ + L Sbjct: 300 SAKIDNFMQNELNNL 314 >gi|330996061|ref|ZP_08319955.1| PPIC-type PPIASE domain protein [Paraprevotella xylaniphila YIT 11841] gi|329574058|gb|EGG55636.1| PPIC-type PPIASE domain protein [Paraprevotella xylaniphila YIT 11841] Length = 479 Score = 75.5 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 28/298 (9%), Positives = 79/298 (26%), Gaps = 43/298 (14%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K++ + + C + + + + ING+ ++ + Sbjct: 1 MMKMMRKF--ALWCCSLCLTGILYAEGNDPVVMKINGKDVSRSEFE-------YNFNKNN 51 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 E + ++ + E + K + + + + Sbjct: 52 GENVVDKKTVDEYVDLFVNYKLKVEAALDARYDTLSSFKKEFRTYRDQQI---------- 101 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + E E+ MK + L+ I + Sbjct: 102 ------------------RPYFVSLSAEEKELRRYYDGMKASIGPDGLVHPAHIMILVAQ 143 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEK----FASKIHDVSIGKAQ-YLLESDLHPQF 246 K + + L + + A K G + + +F Sbjct: 144 KATPEEQAKAKERIDSIYTALQQGADFATLAKQCSADKGSAARGGDLGGWFAKGQTLKEF 203 Query: 247 QNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 +++ ++ + P+++ G + + D++ L LK L +++ A Sbjct: 204 EDVAFSLNKGEMSKPFLSPMGYHIVWMKDRKQLEPYEELKPQLQRFLESRGLKERVAS 261 >gi|228990245|ref|ZP_04150213.1| Foldase protein prsA 2 [Bacillus pseudomycoides DSM 12442] gi|228996340|ref|ZP_04155983.1| Foldase protein prsA 2 [Bacillus mycoides Rock3-17] gi|229004004|ref|ZP_04161808.1| Foldase protein prsA 2 [Bacillus mycoides Rock1-4] gi|228757218|gb|EEM06459.1| Foldase protein prsA 2 [Bacillus mycoides Rock1-4] gi|228763379|gb|EEM12283.1| Foldase protein prsA 2 [Bacillus mycoides Rock3-17] gi|228769484|gb|EEM18079.1| Foldase protein prsA 2 [Bacillus pseudomycoides DSM 12442] Length = 284 Score = 75.5 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 30/300 (10%), Positives = 77/300 (25%), Gaps = 45/300 (15%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + ++S +S T IT GD K++ K + E+ Sbjct: 8 IATAALGTLMLSACGPKDNSEAIATSKVSTITKGDFDKQLK--------ERYGKDMLYEM 59 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + + ++ + S D + F + Sbjct: 60 MAQDIMTKKYKVSDDEVDKEFK-----------KAKDQFGDQFKTVLESNRLKDEDDFKN 108 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q + + + +++ + + +K Sbjct: 109 QIRFKLAMNEAIKKSITDKDVKANYKPEIKASHI--------------------LVNDEK 148 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT 258 D ++ ++ + + G Y + P+F+ K + + Sbjct: 149 TANDIKKQLDEGASFEELAKQQSQDPGSKENGGDLGYFGPGKMVPEFEEAAYKLNVGEIS 208 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE---AEYVKKLRSNAIIH 315 P + +G I + DK++L +K + + + + + A I Sbjct: 209 KPIKSSQGYHIIKLTDKKELKPYDEVKDSIRKNLEEKLLADQTTGQKILLDEFK-KADIK 267 >gi|68171990|ref|ZP_00545291.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Sapulpa] gi|67998586|gb|EAM85338.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Sapulpa] Length = 395 Score = 75.5 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 109/297 (36%), Gaps = 12/297 (4%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--NGELEKIAVQELI 81 + + I+ + S +I +N E+I++ D+ KRIA+ K E+IA+ LI Sbjct: 8 LLVLFIILYSSNVFASVKIVAMVNDELISNLDLEKRIAINKFFYKVEGNTAEEIALNALI 67 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 E++ +QE K +T + Q L D S+++ QG+ F Q++ + Sbjct: 68 DESIWRQEARKLKVTVTERDLLEAIKQFLVIKNLGNIDLKSYVEAQGLDYKLFVQHMKSK 127 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 +W ++ + E+ ++ M + + + + + + + Sbjct: 128 LLWNKILMLKIAPYIIISDKEVQDSRDNMVGNGLD--ISVHIQEVMLPASMNDNESIISS 185 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY 261 I +S + + + + V++ L + L L + P Sbjct: 186 IISELQSGVSVETIKANRKDVLFEEASVNVKNIDANLANKL-------LNAKIGDVIGPM 238 Query: 262 VTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 ++ G I + + D+ E A L + + K + + L++ A + Sbjct: 239 KSEYGTLIIKLIHRSDINKEFANSNVDLRQMHLNIEQGKEYLDQISILKTKATCENF 295 >gi|298206782|ref|YP_003714961.1| peptidyl-prolyl cis-trans isomerase [Croceibacter atlanticus HTCC2559] gi|83849414|gb|EAP87282.1| peptidyl-prolyl cis-trans isomerase [Croceibacter atlanticus HTCC2559] Length = 652 Score = 75.5 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 29/271 (10%), Positives = 81/271 (29%), Gaps = 39/271 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + Y L +FC++ + + + +I T++GE + D + + + Sbjct: 1 MKLYRFLFVFCLLIAGNTIAQELDKQIIMTLDGEPVYASDFVRVYQKNLDLVQDESQKD- 59 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + E LK + + ++ R F+ + Sbjct: 60 -----VDEYLKLFIDYRLKLREAYEQGLDTTLKFQREFKTYRNQFA-------------R 101 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 +L ++ +V+ + + ++ + ++ Sbjct: 102 NFLTDNNVSEALVQEAYDRTVNEVNA------------------SHILIRVNQNATPEDT 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQNL-LKKS 253 +IKD E + + ++ + G+ + + F+ Sbjct: 144 LKAYSKIKDIREKAVNGRSFETLAKTYSEDPSAKKNGGELGWFTALKMVYAFEEQAYTVP 203 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 + + P+ T+ G + + D+R GE+ + Sbjct: 204 VGDVSEPFRTRFGYHILKVNDRRASAGEVEV 234 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 24/270 (8%), Positives = 68/270 (25%), Gaps = 16/270 (5%) Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 L ++ L + A + E + + + + + Sbjct: 102 NFLTDNNVSEALVQEAYDRTVNEVNASHILIRVNQNATPEDTLKAYSKIKDIREKAVNGR 161 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY-- 178 S + ++ + + W +K + + + + + + Sbjct: 162 SFETLAKTYSEDPSAKKNGGELGWFTALKMVYAFEEQAYTVPVGDVSEPFRTRFGYHILK 221 Query: 179 ---------LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHD 228 + + + RI++ + ++F+ Sbjct: 222 VNDRRASAGEVEVAHIMVSPKPKDTVFNPKDRIEELYLKVKQGEDFGVLAKQFSDDRNSA 281 Query: 229 VSIGKAQYLLESDLHPQF---QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 GK L+ + + T P+ TQ G I + D+ + ++ Sbjct: 282 RREGKLDRFGSGKLNSEVFEKKAFSLTKAGQVTEPFETQYGWHIIKLIDRFPIPSFNEMR 341 Query: 286 AYLSAQN-TPTKIEKHEAEYVKKLRSNAII 314 L + ++ V L+ + I Sbjct: 342 GELEKKVTKDSRANLISDALVAGLKDHYSI 371 >gi|225621308|ref|YP_002722566.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brachyspira hyodysenteriae WA1] gi|225216128|gb|ACN84862.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brachyspira hyodysenteriae WA1] Length = 317 Score = 75.5 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 40/321 (12%), Positives = 102/321 (31%), Gaps = 21/321 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---N 69 +K + + + IF ++ + + I + IT D R L LQ Sbjct: 1 MKKIIVFILSFIFIQSNLLFND---VVNSIVGIVGSMPITYEDFLSRKTFLTLQARSIGQ 57 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + + ++L+ E + +++++ + N V A+ ++A+ F+ L +GI Sbjct: 58 KVTDDMVYKDLVEERVMYLKLKENNFVIEENDVKRRLESIAKQYNMNADQFAKQLMAEGI 117 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFML-KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +K + Q ++ + + E + N K K+ + L++ Sbjct: 118 SYEEYKNSIKKQIAMENLYGLVVNNTEISDKEADEFYNNTKDKSAFEADTLVKLSWIFFK 177 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYL-----LESDL 242 +G Q+ R ++++ + G Y + L Sbjct: 178 AATFTEKGEKQELASKVRGMAARGQDFAELAKQYSEDEATRKNGGDLGYNLLYDAGKRSL 237 Query: 243 HPQFQ-----NLLKKSQNNTTNPYV-TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 Q ++ KG + I + +++ + + K Sbjct: 238 PAQINAGLNLAKRGYKVGTVSSVRELVGKGFYIVKIMEIE--KDMESIRTRVKNYLSEAK 295 Query: 297 IEKHEAEYVKKLRSNAIIHYY 317 + + +++ + + Y Sbjct: 296 MRESFIKWLDEETKRVSVQIY 316 >gi|94677050|ref|YP_588994.1| peptidylprolyl cis-trans isomerase SurA [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|122070619|sp|Q1LSS0|SURA_BAUCH RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|94220200|gb|ABF14359.1| peptidylprolyl cis-trans isomerase SurA [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 433 Score = 75.5 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 29/299 (9%), Positives = 97/299 (32%), Gaps = 15/299 (5%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDI--------SKRIALLKLQKINGELEKIAVQELIV 82 + + ++ +N ++I + ++ + + Q + +L K + LI+ Sbjct: 21 CAIAEPNLIDQVVAIVNNDIILESELKILRDSIQNYAKLNYQEQLEDNQLNKHIIDRLII 80 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + +Q+ + S IT +N + LS + + ++ L Sbjct: 81 KKIIQQQAKLSHITIAETKLNKIIHDLTSSQNLSIAKLRHLMYSNRNIYDIYRAQLRQDL 140 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG-FVQKR 201 + +V+ + + L E+ +K+ + + +L +P+ + Q + Sbjct: 141 LIAEVLNSALHRRITILPQEVEFLAKKIAIRKNTTFNLSHMLIPLPEKPSRKQKNEAEAL 200 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNP 260 + K+++ ++ + + L ++L + + P Sbjct: 201 ALFLMAQSEKQNDFRELAIKYSTDTQMLNSFSMIGIQHTKLPLILAKHLYGAQKGSVIGP 260 Query: 261 YVTQKGVEYIAICD-----KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + G+ + + D ++ ++ + + + + + + I Sbjct: 261 IYSDIGIHILKVHDMIRTHMSNIPITEVYARHILLRTSVKRNDNQARVQLLNIARKINI 319 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 50/154 (32%), Gaps = 2/154 (1%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + M NI + E R +L + NQ VQ + + + + Sbjct: 274 DMIRTHMSNIPITEVYARHILLRTSVKRNDNQARVQLLNIARKINIGDISFSIVAKQISE 333 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 I G + + P F+ LL ++ + P + +G I + + R + Sbjct: 334 DIISSQQGGDLGWNALNAFTPTFRKLLLSLNKGQLSIPVRSSQGWHLIQLQNIRQVEN-T 392 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K K+ + ++++ R A I Sbjct: 393 TNKEAAYRILWHRKLAEIAHIWIQEQRDLAYIKI 426 >gi|15806083|ref|NP_294787.1| peptidyl-prolyl cis-trans isomerase C [Deinococcus radiodurans R1] gi|6458794|gb|AAF10636.1|AE001957_4 peptidyl-prolyl cis-trans isomerase C [Deinococcus radiodurans R1] Length = 344 Score = 75.5 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 22/308 (7%), Positives = 73/308 (23%), Gaps = 46/308 (14%) Query: 34 KSWAMSSRIRTTINGEVITDGDISK-----------------------RIALLKLQKING 70 + + + + +T D + A + + + Sbjct: 47 STTQSPDAVVARVGNQTLTLADFDRSFRVAVAGVVNAQGLPLSDDLLAEFASSRPEYLKQ 106 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + + A+ +L ++ + D+ ++ Q G A+ + Sbjct: 107 FVREQALTQL----------ARASVKPDAAAIDAQLAQARAGFGSDADFQQALTQTGYGS 156 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + + L Q++ +++ ++ + + ++ R+ + Sbjct: 157 ADDLRAGLERQAVIAPYLQS-VQKRFTFGDAIVNGYYNLHRDAFTRDAEACVKHILVATE 215 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL 249 + + G + D F Sbjct: 216 AEAKTIVTD---------LSAGKDFAAVAKAKSQDPGSAAEGGDLGCIAPGDTVAAFDKA 266 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 N T+ G + + +R G + L + + +Y+ Sbjct: 267 SFSGPLNQPQVVQTEYGWHVLTV-SRRSAAGLLPL-TEAAPLIREQLSREAAQKYLDAQI 324 Query: 310 SNAIIHYY 317 + + + Sbjct: 325 ARIKVETF 332 >gi|237747325|ref|ZP_04577805.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oxalobacter formigenes HOxBLS] gi|229378676|gb|EEO28767.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oxalobacter formigenes HOxBLS] Length = 259 Score = 75.5 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 50/305 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--QKINGEL 72 ++ VL + I + +NG+ I + L +K +L Sbjct: 1 MIKKALVLSAISLSLISTTVFAEN----LAVVNGKPIPASHSDALVKELVSYGEKDTPQL 56 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + +L++ + QE EK + Sbjct: 57 RQDIKNKLVLREVLVQEAEKQNVASSDEVKKQL--------------------------- 89 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + N + + + ++Y ++ +L + Sbjct: 90 ---EFAKRSIMIDALRTNYLKKNPVSDKEIKAEYDRVASLQNGQQYHVKHILVKNEADAQ 146 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 + K + ++ + + G + S+ F + + Sbjct: 147 NIINQLNKGANFEKIAKEKSIDQGSAAR----------GGDLSWASPSNYIKPFSDAMIA 196 Query: 253 -SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + T P TQ G I + D R + + + E+ EY L Sbjct: 197 LKKGQITKTPVKTQFGYHIIKLVDVRKATL--PSLNQVKPKIKTSLEERKWQEYEMNLMK 254 Query: 311 NAIIH 315 A I Sbjct: 255 QAKIE 259 >gi|225154955|ref|ZP_03723452.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Opitutaceae bacterium TAV2] gi|224804314|gb|EEG22540.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Opitutaceae bacterium TAV2] Length = 332 Score = 75.5 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 28/308 (9%), Positives = 79/308 (25%), Gaps = 33/308 (10%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGE 71 ++ + + + C S+ + A + I ++ + DI + L Q Sbjct: 25 LRAIASGNAIFALCAASAFSFSASAAADAGILARVSDTEVKIDDIRSSLENLSPQDQAAL 84 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 +N + E + D+ Sbjct: 85 AANP------------------------ALLNQTVRSLLARRVVLNEALAQKWDQHPAFT 120 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 F++ I + E ++ A + + +R I + Sbjct: 121 AQFEKLRENALIESYLQSVSQPPADFPSEADLQAVYEANRAALTAPRQVRLAQIYIAAPR 180 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-----KIHDVSIGKAQYLLESDL-HPQ 245 + + ++ + +L + A K + G+ +L + Sbjct: 181 SADSATQDEARARLDDVKKKLAQKGADFAALARVESDEKRSAANGGELGWLTDGQFRPEI 240 Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAE 303 L + P G + + R+ +++ L+ + + + + Sbjct: 241 LDTLKNLAAGQVGEPLRLDDGWHILKALEVREARPLTLDEVRSQLAQRLRAERAQANRQT 300 Query: 304 YVKKLRSN 311 ++ +L Sbjct: 301 HLARLLEK 308 >gi|307730260|ref|YP_003907484.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1003] gi|307584795|gb|ADN58193.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1003] Length = 304 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 32/286 (11%), Positives = 65/286 (22%), Gaps = 55/286 (19%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +N VIT + + L ++I L +Q EK Sbjct: 59 VARVNNVVITQAQLDDAVRASNAPDTP-TLRASIKNQMIARELFRQAAEKQHY------- 110 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 Q + + L + Sbjct: 111 ----------------------------------ESRPQVVAAVEQAKSAAMTAAYLRDQ 136 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + ++ + I L + + +++ Sbjct: 137 VKPAPVTDADVKAKYDAIVATLGEFEYKPSAIAVKDADTAQTVLTQLKKGTDFAQLAKQY 196 Query: 223 ASKIHDVSIGKAQYL----------LESDLHPQFQNLLKKSQNNT-TNPYVTQKGVEYIA 271 + G ++ ++ P + L+K Q + P + Sbjct: 197 SQGPGAAQGGALNWISFRTPIQPGNTQNWPQPLAEALVKLPQGGVSSAPVQVGDAFWILR 256 Query: 272 ICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +KR +K L Q ++K A+ V L NA I Sbjct: 257 VDEKRPTQVPQYDQIKDTLRKQLEQVALQKATAQVVVDLMKNARIQ 302 >gi|75758814|ref|ZP_00738928.1| Peptidyl-prolyl cis-trans isomerase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74493718|gb|EAO56820.1| Peptidyl-prolyl cis-trans isomerase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 254 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 88/287 (30%), Gaps = 40/287 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + ++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYDQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D L + F + + +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKDVDKKFD--------EMKKLYGDQFDTLMKQQGIKEETIK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q V+ K + E + K +I V++ Sbjct: 104 NSVRAQLAQEKAVEQSITDKDVKAKFEDYKKEIKASHILVKD------------------ 145 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 ++ K ++ + ++++ G + + +F+ +K Sbjct: 146 ---EETAKKVKDELAQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEEAAQKLK 202 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 ++ + P TQ G I + D KA + K + Sbjct: 203 KDEVSEPVKTQFGYHIIKVTDNHADATFDKSKADIKKSLAQEKTQDA 249 >gi|254720016|ref|ZP_05181827.1| Chaperone surA precursor [Brucella sp. 83/13] gi|265985025|ref|ZP_06097760.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella sp. 83/13] gi|306838443|ref|ZP_07471287.1| Chaperone surA precursor [Brucella sp. NF 2653] gi|264663617|gb|EEZ33878.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella sp. 83/13] gi|306406482|gb|EFM62717.1| Chaperone surA precursor [Brucella sp. NF 2653] Length = 311 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 30/280 (10%), Positives = 78/280 (27%), Gaps = 40/280 (14%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG I + DI + L A + E L ++ Sbjct: 51 AVSVNGVTIDEADILTEAQNHPAENPGAALLSAARALAVRELLLQRAR------------ 98 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 ++ + D + ++ V++ + + E Sbjct: 99 ------------------EIGIEPEHEKDAEGRAETDEDALVRMVIEREVDV-PSASRDE 139 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220 + ++ ++ I + + R + + + Sbjct: 140 AQRYYENNRHRFTSAPILEASHILIAADPADQEARDAARQTATRLAAAVIAEPATFASVA 199 Query: 221 -KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN--PYVTQKGVEYIAICDKR- 276 +++S G L P+F+ L++ T P ++ G + + D+R Sbjct: 200 LEYSSCPSGAQGGNLGQLTRGSTVPEFERALERMTPGETTANPIESRFGYHIVRL-DRRV 258 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ + K ++Y+ L + A I Sbjct: 259 EGEELPFDYVADKIAGWLEASTWSKAVSQYIAILAAEAEI 298 >gi|224417667|ref|ZP_03655673.1| hypothetical protein HcanM9_00172 [Helicobacter canadensis MIT 98-5491] gi|253827018|ref|ZP_04869903.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313141212|ref|ZP_07803405.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253510424|gb|EES89083.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313130243|gb|EFR47860.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 282 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 44/300 (14%), Positives = 95/300 (31%), Gaps = 25/300 (8%) Query: 16 LTTYFVLIIFCIVPIV-SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + Y + + V I ++ + ++ + I +NG +T D+ K+Q+ + + Sbjct: 1 MKKYLLTSLLSFVVISHAFGAPSLVNGIAFFVNGNPVTLLDV------YKVQQRDKVEQN 54 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 +AV LI E L ++EI+K I +N AR + E S++ G ++ Sbjct: 55 LAVDILINEKLHEEEIKKHKIVATELELNDEISAIARQNQTTPEQLESYIRTNGGNWENY 114 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 K+ + + + + + ++ + V Sbjct: 115 KEEIKKRILKRKLYQIISQESLKMVDENQLRSYYDTHKEEFSIPQSIDVTKFFSKEGAAL 174 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 + ++ KD + + + + + GK Sbjct: 175 ETLIKSGGKDIPKGIGQENEVLQTTALNPQIVSAFTQGKIGSFTP--------------- 219 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P I + L ++ + + K + EY +KLRSNA + Sbjct: 220 ---IYPIGEDFVTFLIKAKNNPTLAPFENVRDIVLQKIMSQKEDYLIYEYFEKLRSNAKV 276 >gi|228951646|ref|ZP_04113749.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228808039|gb|EEM54555.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 269 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 33/291 (11%), Positives = 73/291 (25%), Gaps = 43/291 (14%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 ++S S T IT LK + L ++ Q++I + K Sbjct: 1 MLSACGQKNGSATVATATDSTITK---DNFEKQLKDRYGKDMLYEMMAQDVITKKYK--- 54 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 VN + + G F ++ Q + + Sbjct: 55 -------VSDEEVNKEVEKVKKQYG------DQFKKVLENNGLKDEEDFKNQIKFKLAMN 101 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 +++ + + K+ + Sbjct: 102 EAIKKSITEKDVKD--------------------HYKPEIKASHILVSDENEAKEIKSKL 141 Query: 210 LRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 ++ + + G Y + P+F+ K + +NP + G Sbjct: 142 DAGASFEELAKQESQDLLSKDKGGDLGYFNSGTMAPEFERAAYKLNVGQISNPVKSSNGY 201 Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAIIHY 316 I + DK+DL +K + + + +++ A I Sbjct: 202 HVIKLTDKKDLKPYDEVKNSIRKNLEEERTADPVFSKKLLQEELKKANIKI 252 >gi|39934430|ref|NP_946706.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris CGA009] gi|39648279|emb|CAE26799.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris CGA009] Length = 347 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 32/274 (11%), Positives = 89/274 (32%), Gaps = 27/274 (9%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 + + I+ +I IA L GE ++ A+++ D N Sbjct: 76 DVIARVGSTNISTEEIRGYIAAL------GERDRAALRQ------------------DPN 111 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 ++ N ++ E + D+Q ++ ++ + + + Sbjct: 112 LLSQAVRMMLANRLVTQEIAAKKWDQQPSVAEKLERVRESAAVELYLQSVSTPPEKFPSD 171 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 ++ + + +P ++ ++ K ++ + +L Sbjct: 172 EDLQKVYEANRAAFAMPRQFELAQIYVPLSRDADKAAEDAARKSVDDIQRKLKAPGADFS 231 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD-- 277 AS+ D + G +++E+ + P+ + + + ++N + P G +I + D + Sbjct: 232 AIASEAGDANAGALGWVVENQIRPEIRTKVMELAKNAISEPIKLDDGWHFIKVLDTKAPY 291 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ L Q + Y+ +L Sbjct: 292 TRTLPEVRDGLVQQIRSERSAALRRAYLAELLKQ 325 >gi|153010218|ref|YP_001371432.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ochrobactrum anthropi ATCC 49188] gi|151562106|gb|ABS15603.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ochrobactrum anthropi ATCC 49188] Length = 308 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 32/280 (11%), Positives = 80/280 (28%), Gaps = 40/280 (14%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG I + DI + L A I E L ++ E + Sbjct: 48 AVSVNGVAINETDILTEAQNHPSENPGAALLAAARALAIRELLLQRARETGIV------- 100 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + D + ++ V++ + + E Sbjct: 101 -----------------------PEHEKDAEGRSETDEDALVRMVIEREVEV-PSATREE 136 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220 + ++ ++ I + +Q + R + + + Sbjct: 137 ALRFYENNRHRFTSAPILEASHILIAADPADSQAREKARTTASHLASSVIAAPATFASVA 196 Query: 221 -KFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGVEYIAICDKR- 276 +++S G L P+F+ + + T P ++ G + + D+R Sbjct: 197 HEYSSCPSGAQGGNLGQLTRGSTVPEFERALERLTPGEITPAPIESRFGFHIVRL-DRRI 255 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ + K ++Y+ L ++A I Sbjct: 256 EGEELPFDYVADRIAGWLEASTWSKAVSQYIAILAADADI 295 >gi|326940021|gb|AEA15917.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar chinensis CT-43] Length = 283 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 89/309 (28%), Gaps = 50/309 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 + + +++ + S + T + +T+ ++SK L+ Q L Sbjct: 1 MKKKKIFIGTIISCVMLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQQYGESTLY 55 Query: 74 KIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + + L+ + E K + + + F GL ED Sbjct: 56 QMMLSKALLDKYKVSDEEAKKKVEEAKDKMGENFKSTLEQLGLKNED------------- 102 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K+ + + + +K K + + Sbjct: 103 ELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD------------------ 144 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ +E ++++ G+ +F+ Sbjct: 145 ------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAY 198 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306 K ++P T G I + DK++L +K + +++ ++ V Sbjct: 199 KLDAGQVSDPVKTTYGYHIIKVTDKKELKPFDEVKEKIRKDLEQQRLQDTTGKWKQQVVN 258 Query: 307 KLRSNAIIH 315 L +A I Sbjct: 259 DLLKDADIK 267 >gi|294853303|ref|ZP_06793975.1| peptidyl-prolyl cis-trans isomerase C [Brucella sp. NVSL 07-0026] gi|294818958|gb|EFG35958.1| peptidyl-prolyl cis-trans isomerase C [Brucella sp. NVSL 07-0026] Length = 311 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 30/280 (10%), Positives = 78/280 (27%), Gaps = 40/280 (14%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG I + DI + L A + E L ++ Sbjct: 51 AVSVNGVTIDEADILTEAQNHPAENPGAALLSAARALAVRELLLQRAR------------ 98 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 ++ + D + ++ V++ + + E Sbjct: 99 ------------------EIGIEPEHEKDAEGRAETDEDALVRMVIEREVDV-PSASRDE 139 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220 + ++ ++ I + + R + + + Sbjct: 140 AQRYYENNRHRFTSAPILEASHILIAADPADQETRDAARQTATRLAAAVIAEPATFASVA 199 Query: 221 -KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN--PYVTQKGVEYIAICDKR- 276 +++S G L P+F+ L++ T P ++ G + + D+R Sbjct: 200 LEYSSCPSGAQGGNLGQLTRGSTVPEFERALERMIPGETTANPIESRFGYHIVRL-DRRV 258 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ + K ++Y+ L + A I Sbjct: 259 EGEELPFDYVADKIAGWLEASTWSKAVSQYIAILAAEAKI 298 >gi|57238208|ref|YP_178711.1| major antigenic peptide PEB4 [Campylobacter jejuni RM1221] gi|86149798|ref|ZP_01068027.1| major antigenic peptide PEB4 [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151529|ref|ZP_01069743.1| major antigenic peptide PEB4 [Campylobacter jejuni subsp. jejuni 260.94] gi|88596967|ref|ZP_01100203.1| major antigenic peptide PEB4 [Campylobacter jejuni subsp. jejuni 84-25] gi|205355446|ref|ZP_03222217.1| major antigenic peptide PEB3\cell binding factor 2 [Campylobacter jejuni subsp. jejuni CG8421] gi|218562247|ref|YP_002344026.1| major antigenic peptide PEB-cell binding factor [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315124114|ref|YP_004066118.1| peptidyl-prolyl cis-trans isomerase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|123141587|sp|Q0PAS1|CBF2_CAMJE RecName: Full=Cell-binding factor 2; AltName: Full=Major antigen peb4A; Flags: Precursor gi|671840|emb|CAA59175.1| cell binding factor 2 [Campylobacter jejuni subsp. jejuni 81-176] gi|57167012|gb|AAW35791.1| major antigenic peptide PEB4 [Campylobacter jejuni RM1221] gi|85839616|gb|EAQ56876.1| major antigenic peptide PEB4 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841158|gb|EAQ58406.1| major antigenic peptide PEB4 [Campylobacter jejuni subsp. jejuni 260.94] gi|88190656|gb|EAQ94629.1| major antigenic peptide PEB4 [Campylobacter jejuni subsp. jejuni 84-25] gi|112359953|emb|CAL34742.1| major antigenic peptide PEB-cell binding factor [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|205346680|gb|EDZ33312.1| major antigenic peptide PEB3\cell binding factor 2 [Campylobacter jejuni subsp. jejuni CG8421] gi|284925857|gb|ADC28209.1| major antigenic peptide PEB-cell binding facto [Campylobacter jejuni subsp. jejuni IA3902] gi|315017836|gb|ADT65929.1| peptidyl-prolyl cis-trans isomerase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315058010|gb|ADT72339.1| Cell binding factor 2 precursor [Campylobacter jejuni subsp. jejuni S3] gi|315928817|gb|EFV08084.1| PPIC-type PPIASE domain protein [Campylobacter jejuni subsp. jejuni 305] Length = 273 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 34/299 (11%), Positives = 91/299 (30%), Gaps = 35/299 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 +++ +++ T+NG+ I+D ++S+ A + + L + LI Sbjct: 4 FSLVAATLIAGVVLNVNAATVATVNGKSISDTEVSEFFAPMLRGQDFKTLPDNQKKALIQ 63 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + + I + + + A + Sbjct: 64 QYIMQDLILQDAKKQNLEKD---------------------------PLYTKELDRAKDA 96 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 I +V + + ++ A + K+ V+ ++ + K + + Sbjct: 97 ILVNVYQEKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKG 156 Query: 203 KDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTN 259 +E + ++ + G+ + +S + F + +N TT Sbjct: 157 LKGKELDAKFS---ELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTT 213 Query: 260 PYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P T G I + + +K + + +K + + L ++A + Y Sbjct: 214 PVKTNFGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEY 272 >gi|114330677|ref|YP_746899.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas eutropha C91] gi|114307691|gb|ABI58934.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas eutropha C91] Length = 630 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 28/259 (10%), Positives = 70/259 (27%), Gaps = 14/259 (5%) Query: 61 ALLKLQKINGELEKIAVQ----ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 A+ + + + + ++ +IV I T + N Sbjct: 145 AMFEARLAGDLMRQQLLEGITGSVIVSKTVADRIASLSETKYEINRVTINPEQYINQAEP 204 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 E D + + I+ + + + + + EI + ++ R Sbjct: 205 DEAAIQSYYDSHRQDFTLPERVRIEYVVLSL--EELAKQEQISDEEIKKYFDEHQDEFGR 262 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK----LEKFASKI-HDVSI 231 R + + AE+ ++ +D +K ++ + + Sbjct: 263 VEERRASHILLTVPVDATEEQKAAIKAKAEQILEQVKQDPDKFPELAKELSEDPGSAKAG 322 Query: 232 GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG--EIALKAYL 288 G + + F++ + Q + P T G I + +D +K + Sbjct: 323 GDLGFFARGLMVKAFEDTAFEMQLDEIRGPVETPFGFHIIRLTAVKDANVAKFDEVKEGI 382 Query: 289 SAQNTPTKIEKHEAEYVKK 307 K E + Sbjct: 383 RQTLQRQKAADRFGELSED 401 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 27/306 (8%), Positives = 85/306 (27%), Gaps = 25/306 (8%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 F + I + + L+ F + SY+ +S +++GE I+ + + + + Sbjct: 4 FVNQKKTIVQIVLFIALLPFLFWGLESYQGMGSASD-VASVDGEEISRQEYEQALRNQQE 62 Query: 66 QKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 N ++ ++ LI + L + E + G+ + + A Sbjct: 63 NLRNMLGENFDASLLDSPQMRMAVLENLIQQKLLRHEAGRVGLAVLDSRLTAEIQNIALF 122 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + A + D+++ + + ++ + Sbjct: 123 HEDDKFSYERYRELLQRQGMSPAMFEAR--LAGDLMRQQLLEGITGSVIVSKTVADRIAS 180 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ +Y I V + Q + + R ++ + Sbjct: 181 LSETKYEINRVTINPEQYINQAEPDEAAIQSYYDSHRQDFTLPERVRIEYVVLSLEE--- 237 Query: 233 KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292 + + + + ++ + + KA + A+ Sbjct: 238 ---LAKQEQISDEEIKKYFDEHQDEFGRVEERRASHILLTV---PVDATEEQKAAIKAKA 291 Query: 293 TPTKIE 298 + Sbjct: 292 EQILEQ 297 >gi|228996233|ref|ZP_04155879.1| Foldase protein prsA 1 [Bacillus mycoides Rock3-17] gi|229003892|ref|ZP_04161699.1| Foldase protein prsA 1 [Bacillus mycoides Rock1-4] gi|228757344|gb|EEM06582.1| Foldase protein prsA 1 [Bacillus mycoides Rock1-4] gi|228763501|gb|EEM12402.1| Foldase protein prsA 1 [Bacillus mycoides Rock3-17] Length = 281 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 89/299 (29%), Gaps = 45/299 (15%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 ++ +++ + S +I T+ G+ I+ D+ K++ K ++ + Sbjct: 4 AMLALAATSLIALSACGSSDKIVTSKAGD-ISKEDLYKQMK--------DRAGKQILRGM 54 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 ++E + + + D + F + L +QG + FK+ + Sbjct: 55 VLEKVLVKNHKVDDKEVDKKYD--------EYKKQLGDQFDAALKQQGFTKDSFKESVRA 106 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + +++ K + + + Sbjct: 107 ELAMDKAIESSITDKELKENYKPEIKASHILVKD------------------------EA 142 Query: 201 RIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT 258 K +E + ++++ G Y + +F + K ++ + Sbjct: 143 TAKKVKEELGQGKSFEELAKQYSEDKGSAEKGGDLGYFGPGKMVKEFSDAAYKLKKDEVS 202 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRSNAIIH 315 P +Q G I + D ++ KA + K + + AE K A + Sbjct: 203 EPVKSQFGYHIIKVTDIKEQKSFEEEKANIKKGLVEKKKQDPQFMAELQDKELKKADVK 261 >gi|262374583|ref|ZP_06067857.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter junii SH205] gi|262310579|gb|EEY91669.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter junii SH205] Length = 361 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 19/191 (9%), Positives = 59/191 (30%), Gaps = 8/191 (4%) Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL-IRTVLFSIPDNK 191 + ++ + + +Q +++ + +R +L + Sbjct: 157 ESAWAEDEEKAISALIDKNVKATIPDAATCERYYEQNIEDFITDPVMSVRHILLACLPED 216 Query: 192 LQNQGFVQKRIKDAEESRLR----LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + + ++K D E + ++ G + + P+F+ Sbjct: 217 GEERLKLKKTAYDYIEQIQSDSNPAAAFIELARQHSACPSKEQGGDLGVISKGQTVPEFE 276 Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEY 304 + K +P ++ G + + +K+ + A +S + + + +Y Sbjct: 277 KVLFKLETGLAPSPIESRYGFHVVDVLNKQQGIQMTYEQVSAAISNKLSQKAFHQSLCDY 336 Query: 305 VKKLRSNAIIH 315 + L +A I Sbjct: 337 LFTLADDAEIE 347 >gi|30261164|ref|NP_843541.1| peptidylprolyl isomerase [Bacillus anthracis str. Ames] gi|47526319|ref|YP_017668.1| peptidylprolyl isomerase [Bacillus anthracis str. 'Ames Ancestor'] gi|49183995|ref|YP_027247.1| peptidylprolyl isomerase [Bacillus anthracis str. Sterne] gi|65318433|ref|ZP_00391392.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Bacillus anthracis str. A2012] gi|165871813|ref|ZP_02216456.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0488] gi|167635351|ref|ZP_02393665.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0442] gi|167640186|ref|ZP_02398452.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0193] gi|170688111|ref|ZP_02879323.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0465] gi|170707650|ref|ZP_02898102.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0389] gi|177654152|ref|ZP_02936125.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0174] gi|190566666|ref|ZP_03019583.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis Tsiankovskii-I] gi|196036478|ref|ZP_03103874.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus W] gi|196037489|ref|ZP_03104800.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus NVH0597-99] gi|218902237|ref|YP_002450071.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus AH820] gi|227816105|ref|YP_002816114.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. CDC 684] gi|228926187|ref|ZP_04089262.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228932442|ref|ZP_04095323.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229120660|ref|ZP_04249903.1| Foldase protein prsA 1 [Bacillus cereus 95/8201] gi|229600239|ref|YP_002865593.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0248] gi|254682780|ref|ZP_05146641.1| peptidylprolyl isomerase [Bacillus anthracis str. CNEVA-9066] gi|254725568|ref|ZP_05187350.1| peptidylprolyl isomerase [Bacillus anthracis str. A1055] gi|254734195|ref|ZP_05191908.1| peptidylprolyl isomerase [Bacillus anthracis str. Western North America USA6153] gi|254740159|ref|ZP_05197851.1| peptidylprolyl isomerase [Bacillus anthracis str. Kruger B] gi|254753500|ref|ZP_05205536.1| peptidylprolyl isomerase [Bacillus anthracis str. Vollum] gi|254758597|ref|ZP_05210624.1| peptidylprolyl isomerase [Bacillus anthracis str. Australia 94] gi|46396834|sp|Q81U45|PRSA1_BACAN RecName: Full=Foldase protein prsA 1; Flags: Precursor gi|30254778|gb|AAP25027.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. Ames] gi|47501467|gb|AAT30143.1| peptidylprolyl isomerase PrsA [Bacillus anthracis str. 'Ames Ancestor'] gi|49177922|gb|AAT53298.1| protein export protein prsA [Bacillus anthracis str. Sterne] gi|164712390|gb|EDR17924.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0488] gi|167511787|gb|EDR87167.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0193] gi|167529179|gb|EDR91932.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0442] gi|170127425|gb|EDS96300.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0389] gi|170668006|gb|EDT18757.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0465] gi|172080859|gb|EDT65939.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0174] gi|190562218|gb|EDV16186.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis Tsiankovskii-I] gi|195990952|gb|EDX54924.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus W] gi|196031731|gb|EDX70327.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus NVH0597-99] gi|218537167|gb|ACK89565.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus AH820] gi|227006959|gb|ACP16702.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. CDC 684] gi|228662665|gb|EEL18262.1| Foldase protein prsA 1 [Bacillus cereus 95/8201] gi|228827132|gb|EEM72885.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228833440|gb|EEM79002.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229264647|gb|ACQ46284.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0248] Length = 287 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 89/305 (29%), Gaps = 46/305 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + +++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKDEFYEQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKEVDKKYD--------EMKKQYGDQFDTLLKQQGIKEETLK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q ++ K + + Sbjct: 104 TGVRAQLAQEKAIEKTITDKELKDNYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G + + +F++ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGAGKMVKEFEDAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 ++ + P +Q G I + D ++ KA + + K + + + + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKELVAKKSQDGEFMNDLMMKEIK 259 Query: 311 NAIIH 315 A + Sbjct: 260 KADVK 264 >gi|251794109|ref|YP_003008840.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. JDR-2] gi|247541735|gb|ACS98753.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. JDR-2] Length = 324 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 80/291 (27%), Gaps = 34/291 (11%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEI 90 S A S I T+ G IT D++++ LK Q + L + V + I + Q++ Sbjct: 53 PSDSDHAYSDGIAATVGGFPITAEDLAEQ---LKRQYGDNVLRTMMVHKAIDLEAEAQQL 109 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 S + + + F + K + + +++ Sbjct: 110 SLSSEEEERELTS---------MMDGYDSEEVFYEVMKDQLGMTKSDVEEDVKYRLLLEK 160 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 +L E+EI + +K D + Sbjct: 161 IAILTVNLSEVEIENYIAAHPEQFADRLRLHVQWIVT---------DTEKEADDVLDKLT 211 Query: 211 RLPKDCNKLEKFASKIH-DVSIGKAQYLLESD---LHPQFQNLLKKSQNNTTNPYVTQKG 266 +++ + + G + D + + +T P +G Sbjct: 212 AGDSFEQLALEYSKDANTSDAGGDLGLIDSDDPFYDAEMMEEASRLQTGESTGPIKVPEG 271 Query: 267 VEYIAICDKRDLGG------EIALKAYL---SAQNTPTKIEKHEAEYVKKL 308 I + +++ G + L A+ + +Y ++ Sbjct: 272 YAVIRVLERQKTEGLSGHVLYDTARKELALSKAKPLNEIEDGLLEKYNAEI 322 >gi|313885295|ref|ZP_07819046.1| putative peptidylprolyl isomerase PrsA1 [Eremococcus coleocola ACS-139-V-Col8] gi|312619401|gb|EFR30839.1| putative peptidylprolyl isomerase PrsA1 [Eremococcus coleocola ACS-139-V-Col8] Length = 316 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 86/313 (27%), Gaps = 38/313 (12%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWA----MSSRIRTTINGEVITDGDISKRIALLKLQKI 68 +K + + F + + S + A + TI IT D + L Sbjct: 1 MKKALLKTIGLSFTSLALASSLAGALPVMAQDDVIATIGDTKITKEDFYNEMKSL---AG 57 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 L + ++ ++ + +K + K ++ + N L+ S + Sbjct: 58 KTTLRSMILENVLKQNVKDADALKKSADEEAQEQLDKVGEDQFNAYLNQMQLGSIDE--- 114 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 Q ++ + K + I + P Sbjct: 115 ---------FKYQLYIRNMFQEVVEGKMDLSDEAIKKFYDESYE--------------TP 151 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQ 247 Q + KD + ++ + + G + +F+ Sbjct: 152 MEAQQILVKTEDEAKDVINRLNNGEEFDALAKELSIDEATAANGGLLSPFTSGQMVQEFE 211 Query: 248 NLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY- 304 + +K S+N T P +Q G I + +K + Q +K Y Sbjct: 212 DAVKASENGSVTQEPVKSQYGFHVIKTINNGTKQAFEDVKDDVVNQYKQSKFSDSNFSYG 271 Query: 305 -VKKLRSNAIIHY 316 + +L +A + Sbjct: 272 VIGQLIKDAKVDI 284 >gi|153007316|ref|YP_001381641.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. Fw109-5] gi|152030889|gb|ABS28657.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. Fw109-5] Length = 339 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 84/309 (27%), Gaps = 35/309 (11%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA----LLKLQKINGEL 72 + V K S + NG IT + R+ ++ + E Sbjct: 4 RLIVTGLCALAVACGPKKDEKKSGPVVAQGNGVTITADEFKARLDEQSPFIRARYTTLER 63 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 +K + L+ + +E EK G+ D + + + Sbjct: 64 KKEFLDNLVRFEVLAREAEKRGLADDPDVQMTLKKIMVQKLVQKNFQDLEGAKNLPEPEL 123 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + ++ + K + + + S K Sbjct: 124 QKYY------------------------DDHKSDYFRPKRVRLAAVIWNAPAGSPERAKK 159 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL--- 249 Q AEE + L + + + G Q+ +L F Sbjct: 160 LAQAKAALAKIKAEEKKNALAFNQAVAQYSEDAATKSAGGDLQFKSHEELSQAFSKELAD 219 Query: 250 --LKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYV 305 T+ T KG+ + + +++ +K ++ + + K E++ Sbjct: 220 AAFALQAGQTSGVIETPKGLYLLKLTAQQEELNRSFDQVKTQIANKLYRERKTKEFDEWL 279 Query: 306 KKLRSNAII 314 K+L+ A I Sbjct: 280 KRLKDEAKI 288 >gi|306840866|ref|ZP_07473611.1| Chaperone surA precursor [Brucella sp. BO2] gi|306289137|gb|EFM60393.1| Chaperone surA precursor [Brucella sp. BO2] Length = 311 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 30/280 (10%), Positives = 78/280 (27%), Gaps = 40/280 (14%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG I + DI + L A + E L ++ Sbjct: 51 AVSVNGVTIDEADILTEAQNHPAENPGAALLSAARALAVRELLLQRAR------------ 98 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 ++ + D + ++ V++ + + E Sbjct: 99 ------------------EIGIEPEHEKDAEGRAETDEDALVRMVIEREVDV-PSASRDE 139 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220 + ++ ++ I + + R + + + Sbjct: 140 AQRYYENNRHRFTSAPILEASHILIAADPADQEARDAARQTATRLAAAVIAEPATFASVA 199 Query: 221 -KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN--PYVTQKGVEYIAICDKR- 276 +++S G L P+F+ L++ T P ++ G + + D+R Sbjct: 200 LEYSSCPSGAQGGNLGQLTRGSTVPEFERALERMTPGETTANPIESRFGFHIVRL-DRRV 258 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ + K ++Y+ L + A I Sbjct: 259 EGEELPFDYVADKIAGWLEASTWSKAVSQYIAILAAEAEI 298 >gi|258593862|emb|CBE70203.1| protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 337 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 99/337 (29%), Gaps = 32/337 (9%) Query: 2 TSKVF---TSLSDFIKLLTTYFVLIIFCIVPI--VSYKSWAMSSRIRTTINGEVITDGDI 56 ++ +LS + L+ F+ F + S + + I + GE I + Sbjct: 6 LKRIRGYTKALSVTLWLVIFAFIGTTFLVWGFRSTSGTGGGVVNPIGA-VEGEQIPYAEY 64 Query: 57 SKRI-------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + + L+ V+ LI L E + G+ + + Sbjct: 65 QQAYQRQYQQYQEKLGDKFDEKILEQLNLKGQVVEGLIGRHLLLHEANRLGLVISPDELV 124 Query: 104 YFFVQHARNTGLSAEDFSSFLD--KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 + + +L + + + + V+ + Sbjct: 125 AEITAIPAFSDATGFKRDKYLRTLQSARLTPERFEESLREDLLLRKVEEWVKGGVHLIPD 184 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 E + + EY++ + L +QN + K K EE + Sbjct: 185 ETWEAFRFNRASVKAEYVMFSDL-KTQQAAVQNVAGLAKSNKPWEEIVRASGLKPVTSDF 243 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG- 280 F+ I + E+ L + + +K + + D++D Sbjct: 244 FSWDRSLPHIPDQERFKEAALV--------MERGAVSPIIQGEKASYLLRVIDRKDPDAA 295 Query: 281 -EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 KA S K E+ A++++++R+ A + Sbjct: 296 EFEREKAQFSRGLLQRKREQVFADWIRQVRARAKVKI 332 >gi|229016342|ref|ZP_04173287.1| Foldase protein prsA 1 [Bacillus cereus AH1273] gi|229022583|ref|ZP_04179110.1| Foldase protein prsA 1 [Bacillus cereus AH1272] gi|228738710|gb|EEL89179.1| Foldase protein prsA 1 [Bacillus cereus AH1272] gi|228744934|gb|EEL94991.1| Foldase protein prsA 1 [Bacillus cereus AH1273] Length = 286 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 93/305 (30%), Gaps = 42/305 (13%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + L ++ + + + + S +I T+ G+ IT + ++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSSDKIVTSKAGD-ITKEEFYNQMKT--------QAGK 51 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + +++E + + + D + F + L +QG+ + Sbjct: 52 QVLNNMVMEKVLIKNYKVDDKEVDKKYD--------EMKKQVGDQFDTLLKQQGLKEETV 103 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 K + ++ K + E + K +I V++ Sbjct: 104 KNGVRASLAQEQAIEKSITDKDLKAKYEDYKQEIKASHILVKD----------------- 146 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKK 252 ++ K +E + +K++ G + + +F + K Sbjct: 147 ----EETAKKVKEELAQGKSFEELAKKYSEDPGSKEKGGDLGFFGPDKMVKEFDEAARKL 202 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 ++ + P TQ G I + D KA + + K + + + + K Sbjct: 203 KKDEVSEPVKTQHGYHIIKVTDTHADKTFDQAKADIKKEVVQEKTQDAQFMNDLMMKEIK 262 Query: 311 NAIIH 315 A + Sbjct: 263 KADVK 267 >gi|171058521|ref|YP_001790870.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptothrix cholodnii SP-6] gi|170775966|gb|ACB34105.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptothrix cholodnii SP-6] Length = 275 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 77/280 (27%), Gaps = 49/280 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING---ELEKIAVQELIVETLKKQEIEKSGITFDS 99 +NG+ + + + Q ELE+ EL++ + QE EK G+ +S Sbjct: 34 IAIVNGKGVPTARFDSFMTQVTKQGNQPRTAELERQVKDELVLREIFVQEAEKRGLQKNS 93 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + + ++ Sbjct: 94 EYRTQ------------------------------MEIARQSLLIRELFNEYQKKNPVTD 123 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + +EY + +L D ++ K Sbjct: 124 AEIKAEYDKVKSGAGEKEYHAKHILVEKEDEAKALIAELK-----------GGAKFDELA 172 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP-YVTQKGVEYIAICDKR 276 +K + + G + ++ P+F + K + T +Q G I + D R Sbjct: 173 KKASKDPGSAQNGGDLDWAAPANYVPEFSQAMVKLEKGKYTETAVKSQFGYHIILLDDVR 232 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + AQ ++ +Y ++LRS A Y Sbjct: 233 EAQF--PPLEEVKAQLEQRLAQQKMGKYREELRSKAKTDY 270 >gi|124266954|ref|YP_001020958.1| putative exported isomerase [Methylibium petroleiphilum PM1] gi|124259729|gb|ABM94723.1| putative exported isomerase [Methylibium petroleiphilum PM1] Length = 272 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 34/284 (11%), Positives = 71/284 (25%), Gaps = 54/284 (19%) Query: 43 RTTINGEVITDG-------DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 +NG+ + ++K+ Q E+++ + Q EK G+ Sbjct: 30 IAIVNGKPVPKARADALLLQVTKQAQSQGQQLPPETER-QVKDEVVLREIFTQAAEKRGV 88 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + + ++ + Sbjct: 89 AATPEYKAQ------------------------------MELARQSILIRELFADFQKKN 118 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + +EY +R +L D +Q Sbjct: 119 PVTDAEVQAEYDKYKAQAGDKEYRVRHILVETEDEAKALIAQIQ-----------GGASF 167 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAI 272 +K + + G + P+F N + K + T P +Q G + + Sbjct: 168 EETAKKSSKDPGSAPNGGDLDWAAPGSFVPEFSNAMVKLEKGKMTEAPIKSQYGFHILKL 227 Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 D RD A + Q ++ + +L+S A Y Sbjct: 228 EDVRDAQ--FPPLAEVKPQIEQRLSQQKVGAFRDELKSKAKTDY 269 >gi|114320159|ref|YP_741842.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkalilimnicola ehrlichii MLHE-1] gi|114226553|gb|ABI56352.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkalilimnicola ehrlichii MLHE-1] Length = 260 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 27/276 (9%), Positives = 71/276 (25%), Gaps = 39/276 (14%) Query: 46 INGEVITDGDISKRIALLKL--QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 +NG IT I+ A K E+ A+ + E L+++ ++ + ++ + Sbjct: 5 VNGVEITHHAINIESAHHKRPDLDPREAQEQAALALTLRELLRQRALQLDLEVPEDDSDD 64 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 D + Sbjct: 65 QALDAVIDRLIELEVDIPQADEATCRRWFEQNPDH------------------------- 99 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK-RIKDAEESRLRLPKDCNKLEKF 222 T +R +L + L+ + ++ + + Sbjct: 100 --------FRTPDLAEVRHILVAGHPEDLEEREQARQTAEGLIRQLQADPAAFPALATAH 151 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-- 279 + G + + P+F++ + + P T+ G + + + Sbjct: 152 SRCPSSEQGGLLGQVSRGETVPEFEDAVLRLPVGLAPQPIKTRYGFHVVEVLQRIPGTAL 211 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 A+ ++ ++ +Y++ L A I Sbjct: 212 PFEAVHERIAEYLEAVSRQRALNQYLRLLVGEADIK 247 >gi|289207782|ref|YP_003459848.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thioalkalivibrio sp. K90mix] gi|288943413|gb|ADC71112.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thioalkalivibrio sp. K90mix] Length = 633 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 24/264 (9%), Positives = 69/264 (26%), Gaps = 17/264 (6%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + DI + I L +LQ A L+ + + + + Sbjct: 150 ERDIGRSIILSQLQGGIQATGFPA-DALVDDFSRLRNQTRVASW--------RIFPVDDF 200 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 D + + F ++ + + E ++ + + ++ Sbjct: 201 DQPDVVDDKAIEAYYEANQDDFTTEERVRIAYLQLDPEALEDAVDVSEDDVRQHYEVNRS 260 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSI 231 L I + +I + + E ++ + Sbjct: 261 RYEEPELREVRQIRIQ----DTGEEGEAKINELRDRLDDGEDFAELAEAYSEDSLSADRG 316 Query: 232 GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYL 288 G + DL + ++ + + P T +G + + ++ ++ + Sbjct: 317 GSLGEIARGDLDRTLETIIFTLPEGLISRPVRTDRGWFILEVTSIQEARPQPFEDVRDEV 376 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNA 312 E+ + + + L A Sbjct: 377 ERDLRDRSAEQMQIDALDDLMGQA 400 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 20/232 (8%), Positives = 54/232 (23%), Gaps = 14/232 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + S ++ + + I F + + Y + + +NG I D+ Sbjct: 1 MLQAIRDRASGWLAYVIIGLITIPFAVWGLGEYFGGSGPL-VAAEVNGTDIQVRDVHNEA 59 Query: 61 ALLKLQK-------------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + Q + A++ LI + L +Q + +G +++ Sbjct: 60 RAQRDQMARMFGGQIPDDLLDEEGIRMQALETLIRQELLRQAADSAGFKAAGDSILREIR 119 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + + + + ++ + + Sbjct: 120 GMPVFQEGGQFSRERYAQLLNAQRLSPSDFERDIGRSIILSQLQGGIQATGFPADALVDD 179 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 R R D + +A + + Sbjct: 180 FSRLRNQTRVASWRIFPVDDFDQPDVVDDKAIEAYYEANQDDFTTEERVRIA 231 >gi|89901176|ref|YP_523647.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodoferax ferrireducens T118] gi|89345913|gb|ABD70116.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodoferax ferrireducens T118] Length = 261 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 75/278 (26%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG+ + + + E++ +E+I + QE +K G+ + Sbjct: 27 VAIVNGKAVPTARMDALAQQVARSGRPITPEMQGQLKEEVIAREIFMQEAKKQGLDTTED 86 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + ++ N Sbjct: 87 FRTQ------------------------------MDLARQTLLIRELFANYQKTSPVTDA 116 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + +EY R +L D ++K K + Sbjct: 117 DIKAEYDKFAAANSGKEYRARHILVEKEDQAKAIIAQLKK-----------GGKFDEIAK 165 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN--PYVTQKGVEYIAICDKRD 277 K + + G + S+ P+F L K T P +Q G I + D RD Sbjct: 166 KSSKDPGSGANGGDLDWANPSNYVPEFSQALIKLTKGQTTETPVKSQFGYHIIRLDDVRD 225 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + Q ++ +Y ++LR+ A I Sbjct: 226 AQL--PKFDDVKPQIAQQLQQQKMTKYQEELRAKAKIE 261 >gi|294666558|ref|ZP_06731799.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603702|gb|EFF47112.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 656 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 22/249 (8%), Positives = 68/249 (27%), Gaps = 5/249 (2%) Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 AL++ + + + + E + + A +T ++ Sbjct: 173 ALVRDSLQQSVIPQAVAESGFATKS-EFERLLKLMGETRDVELAMLPPPAADTAPVSDAQ 231 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 D + + I+ + + + +K + + + L Sbjct: 232 IKQWYDGHTQDFRQPETVTIEYVELNAATMPPATAADEATLRKRYEDEKARFVEPEQRLA 291 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 +L S + + K K A E++ + + + G ++ + Sbjct: 292 SHILISAGPDAAAQKAAEAKAAKLAAEAKQTGTDFAALAKANSQDPGSKDAGGDLGWVEK 351 Query: 240 SDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 + F++ P ++ G I + + + G+ + Q +++ Sbjct: 352 GTMVKPFEDALFSMKAGEVVGPIKSEFGYHVIQLREVKGGQGKS--FEQVRDQLAAEQLK 409 Query: 299 KHEAEYVKK 307 + Sbjct: 410 ADADKAFAD 418 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 25/236 (10%), Positives = 57/236 (24%), Gaps = 34/236 (14%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-------------- 46 M K+ S +I ++I F V SY ++ + Sbjct: 1 MLQKLRDKTSGWIATAILGLLMIPFLFVIDNSYLGGIGANN-VAKVQAPPTWWKSAPSWW 59 Query: 47 ------NGEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++Q+ + EK + +L+ E + + Sbjct: 60 PVSLLWQHHEISTQDFRARFEQARMQERQRQGEKFDPRTFESRENKLQVLDQLVDEQVVR 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E +GI TV + + G + + Sbjct: 120 LGAEDAGIVIGDATVRDYIANIPAFQVDGKFSPDQYRAALAQGTPPRTPAQFDALVRDSL 179 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++ + +++ + + + P Q + Sbjct: 180 QQSVIPQAVAESGFATKSEFERLLKLMGETRDVELAMLPPPAADTAPVSDAQIKQW 235 >gi|302872296|ref|YP_003840932.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor obsidiansis OB47] gi|302575155|gb|ADL42946.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor obsidiansis OB47] Length = 331 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 27/299 (9%), Positives = 89/299 (29%), Gaps = 23/299 (7%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL----------------IVET 84 ++ +NGE +T + R LK I + ++ I+ Sbjct: 27 KVVLEVNGEQVTKREYKIRFNTLKENAIQFSSRADILDQVFNGKTYRELLKDELFTILTE 86 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 + ++ + E+ S+ ++ + + Sbjct: 87 ELLCLQDARRRNIYLTKQEEEEIKKYIEELKANEEMRSYFNQYLRKIGSDENHFYRDLHK 146 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 ++ + + + I+ + + + ++ Sbjct: 147 TRIINKLYSSITSKTTVSDSEIVNYYNTNKNQFKKIKIMDIFLKVENEEEDVQKREIANK 206 Query: 205 AEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQF-----QNLLKKSQNNTT 258 + ++K+ ++ G Y + + ++ + + K + + Sbjct: 207 IVSELKKGEDFEKLVKKYTEDESVGITKGIIDYFRKGEKEAEYGSVFEEEVFKLAVGQVS 266 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 N T KG + + D++ + + +K + ++ K ++ Y++ L+ ++ I+ Y Sbjct: 267 NIIKTIKGYHIVKVLDEKYMPLDE-VKGEIQSKLMKQKKDQVFRLYIENLKKSSKINVY 324 >gi|220919567|ref|YP_002494871.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-1] gi|219957421|gb|ACL67805.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-1] Length = 354 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 95/314 (30%), Gaps = 33/314 (10%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA----LLKLQK 67 ++ + ++ + K S T NG IT G++ R+ ++ + Sbjct: 1 MLRRIVLLGLVALAATACQPGSKDSKKSGPAVATGNGFTITAGELKARLDEQSPFIRARY 60 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 E +K + LI + +E E+ G+ D + + Sbjct: 61 STLERKKEFLDNLIRFEVLAREAERQGLANDPDVQLTLKKVMVQKL-------------- 106 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + A +++ ++ + E + + + + + Sbjct: 107 VQKNFQDANGAAAEALPEADLQKYY------DEHKAEYYRPRRVRLAAIVWNAPAGSPER 160 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + + K + +++ L + N+ + A + + G + DL + Sbjct: 161 AAKVALAKKALAKLKAEEKKNTLAFAQLVNEFSEDA--VSKATAGDLGFKSREDLEKAYS 218 Query: 248 NLL-----KKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKH 300 T+ T V + ++D +KA + + K K Sbjct: 219 KEFADVTFNLQPGATSGVLETANAVYLVKGTGEQDELNRTFEQVKAQIQTKLYREKKTKE 278 Query: 301 EAEYVKKLRSNAII 314 ++KKLR +A + Sbjct: 279 FDGWLKKLRDDAKV 292 >gi|291165957|gb|EFE28004.1| PPIC-type PPIASE domain protein [Filifactor alocis ATCC 35896] Length = 247 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 29/283 (10%), Positives = 75/283 (26%), Gaps = 47/283 (16%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ----KINGELEKIAVQELIVETLKKQEIEKSGI 95 S + +NG IT + L + E + E+I + + + ++ + Sbjct: 2 SEVLAKVNGIDITREEFEIMKRSLGKEILKKLQGDNAEDGLLDEMINQKMIYFDAKEKKL 61 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + L + V ++ Sbjct: 62 DETEEFQKQL------------------------------EILKENLLIQFGVNKIVEVE 91 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 E + ++ + + + + ++ + Sbjct: 92 PITDEEKRAFYEEHKNVFVQSGEVEASHILVDN----------EALAREIYIKIDKGIPF 141 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICD 274 EK +S S G + P+F+++ +N + P TQ G I + Sbjct: 142 EELAEKHSSCPSKSSGGSLGKFGRGQMVPEFESVAFALEENEVSVPVKTQFGYHVIRVDK 201 Query: 275 K--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + ++ + A K + + +++L ++ Sbjct: 202 KYPQQQIAFDLIEPEIEATLLEKKQHEQYVKTIEELHKKYVVQ 244 >gi|321313742|ref|YP_004206029.1| hypothetical protein BSn5_11930 [Bacillus subtilis BSn5] gi|320020016|gb|ADV95002.1| hypothetical protein BSn5_11930 [Bacillus subtilis BSn5] Length = 297 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 95/319 (29%), Gaps = 36/319 (11%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIV-SYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 S + + +L V I + S + S TI G+ +T + K + Sbjct: 1 MKSRTIWTIILGALLVCCIAVAYTLTKSQAGASSSGESIATIGGKSVTREEWLKEM---- 56 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + K ++++I + +Q +K+ + + V+ F+ ED Sbjct: 57 ----EDQYGKSTLEDMINVRVVEQLAKKNNLKISKSEVDREFLLIKAVNNSFYEDE---- 108 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + ++ Q + +++ E+ + K K + + R Sbjct: 109 -------HTTEKEWKDQIRYNILLEELLTRDIDISNKELESFYHKNKELYQFDDSYRIRH 161 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-- 242 + D + + + + + E+ + G ++ E+ Sbjct: 162 IVVKDEEEAREVLKE--------LKGGSSFEAVAAERSTDRYTSPYGGDLGFVTEASDNI 213 Query: 243 -HPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIE 298 + ++ + P G I + +K +K + Q ++ Sbjct: 214 PSAYIEEAKTLKEDEWSQEPIKVSNGYAIIQLKEKLKARTFSFDEVKDQIRRQIAMDQLG 273 Query: 299 KHEAEYVKKLRSNAIIHYY 317 VK L A + ++ Sbjct: 274 DKAT--VKTLWKEADVSWF 290 >gi|218897287|ref|YP_002445698.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus G9842] gi|228900906|ref|ZP_04065121.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 4222] gi|218542209|gb|ACK94603.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus G9842] gi|228858832|gb|EEN03277.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 4222] Length = 293 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 89/309 (28%), Gaps = 50/309 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 L + +++ + S + T + +T+ ++SK L+ Q L Sbjct: 11 LKKKKIFIGTIISCLMLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQQYGESTLY 65 Query: 74 KIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + + L+ + E K + + + F GL ED Sbjct: 66 QMMLSKALLDKYKVSDEEAKKKVEEAKDKMGENFKSTLEQLGLKNED------------- 112 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K+ + + + +K K + + Sbjct: 113 ELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD------------------ 154 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ +E ++++ G+ +F+ Sbjct: 155 ------EKTAKEIKEKVNNGEDFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAY 208 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306 K ++P T G I + DK++L +K + ++E ++ V Sbjct: 209 KLDAGQVSDPVKTTYGYHIIKVTDKKELKPFDEVKDKIRKDLEQQRLEDTTGKWKQQVVN 268 Query: 307 KLRSNAIIH 315 L +A I Sbjct: 269 DLLKDANIK 277 >gi|158423053|ref|YP_001524345.1| putative peptidyl-prolyl cis-trans isomerase [Azorhizobium caulinodans ORS 571] gi|158329942|dbj|BAF87427.1| putative peptidyl-prolyl cis-trans isomerase [Azorhizobium caulinodans ORS 571] Length = 304 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 81/288 (28%), Gaps = 46/288 (15%) Query: 40 SRIR---TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 R+ ++NG I+ I+ + + + L+V L QE + G++ Sbjct: 38 ERVVMSPVSVNGVAISRKAIAAEVQNAPAKTPAEGWFNATL-ALVVRELLLQEAHRLGLS 96 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 D ++ +++ + Sbjct: 97 ADPRLEADG---------------------------------RRETEEEALIRALLAQEV 123 Query: 157 GNLEMEIPANKQKMKNI-----TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 E + A ++ N + + +L + ++R + R Sbjct: 124 RTPEADEAALRRFYDNNRRRFLSAPLWEAEHILCAARREDAVAFPAARERAQTLAAVLAR 183 Query: 212 LPK-DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269 P+ + G + D P+F+ LK + + P T+ GV Sbjct: 184 APERFAELARAQSDCPSAGVGGSLGQIGPGDTTPEFEAALKALTPGVISEPVETRYGVHL 243 Query: 270 IAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + D A++ ++A A+YV L A I Sbjct: 244 IRVNRHVDGRTLPFEAVRDQIAAYLADHVTRAAHAQYVALLIGRADIQ 291 >gi|58617519|ref|YP_196718.1| hypothetical protein ERGA_CDS_07920 [Ehrlichia ruminantium str. Gardel] gi|58417131|emb|CAI28244.1| Hypothetical protein ERGA_CDS_07920 [Ehrlichia ruminantium str. Gardel] Length = 425 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 111/306 (36%), Gaps = 22/306 (7%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--INGELEKIAVQE 79 + +F ++ + + ++ +NGE+I+ D+ + IA+ K + + IA+ Sbjct: 31 IGLFLLIFAFYCSNAFANVKMVAMVNGELISSLDLERYIAISKFFYHVDSDVAKDIALDS 90 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-----LSAEDFSSFLDKQGIGDNHF 134 LI E + KQE EK + + Q G DF S+ ++QG+ + Sbjct: 91 LIDEYIWKQEAEKLKVVVSEQEILDAVNQLFVMKGSNHKENHNNDFKSYTEQQGLDYDML 150 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDNKL 192 Q++ + +W ++ + EI + N I+ ++ + + Sbjct: 151 IQHVKSKLLWNKILMLKVVPYISVSTKEILDSQDTMLSPNGLNIFVHIQEIVLPVGLSDN 210 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 ++ ++ + E+ + +++ +L + L L Sbjct: 211 NVTDVIRSLHDGISIDNIKKRVEGLLFEETS-----INLKDIDIVLANQL-------LNA 258 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKKLRSN 311 N+ P T+ G I + ++ ++ E A + L + K + + L++ Sbjct: 259 KVNDVIGPIKTEYGNLIIKLLNRFEINREFANSSVNLQQMYLDVQESKKYVDQISLLKTK 318 Query: 312 AIIHYY 317 A + Sbjct: 319 AKCENF 324 >gi|328949546|ref|YP_004366881.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinithermus hydrothermalis DSM 14884] gi|328449870|gb|AEB10771.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinithermus hydrothermalis DSM 14884] Length = 611 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 36/327 (11%), Positives = 92/327 (28%), Gaps = 32/327 (9%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--KRIALLKL 65 +++ +L F L + + R +NGE + + +++ ++ L Sbjct: 7 AITVIFGILAVAFALGTIFLFT--PQGNPQQEGRTVLWVNGEPVRELELARLQQTTPLFA 64 Query: 66 QKINGELEKIA----VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 G L+ + ++++I+ Q+ + ++ V Q GL Sbjct: 65 LNPEGALKPLIDTYFLEQVILLKALAQDAARVR--VSNSKVRQQVDQIRERFGLETRQDY 122 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 S +Q + + + + + E E K+ E I+ Sbjct: 123 SDFLQQIGYTDATLRDEIRTQLRINKRLEQIREQVELSEEEARFYFTLHKDTYRTEDRIK 182 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + D + ++ E L + +++ G SD Sbjct: 183 ARQIVVDD---------EALARELRERTLAGEEFAALAREYSKVA-AEQGGAVGAEAGSD 232 Query: 242 LHPQFQNLLKKSQ----------NNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLS 289 ++ T+ + + G + + Sbjct: 233 EPQPVTRIVFPKPVADAAFALKEGGLTDVIEAGGRYHLVQVEAFLPGGDASFEEVADAVR 292 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A K + +Y++ +R+ A + + Sbjct: 293 ADALAAKQRQAVEDYLEAVRARATVKF 319 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 71/304 (23%), Gaps = 59/304 (19%) Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETL 85 V + + + T+NGE I + K L+ + +L + + +L V+ Sbjct: 315 ATVKFADLNLFQYVNPVVATVNGEEIP---LRKVAELVFSDQQVPQLIQQGLGQLAVQFF 371 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 F ++ +W Sbjct: 372 --------------------FPASLDQLIARTLLLQEAEKSGQPFVGTQEERARDVRLWK 411 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + E E+ + + V+ Sbjct: 412 TL-------DVTVSEEEVRTFYNENPQRF----------------VIPASAQVKAVTFQD 448 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIG--KAQYLLESDLHPQFQNLLKK--------SQN 255 +ES + E ++ + L P L+ + Sbjct: 449 KESAETFRARLIEGEALEDLAQELGGEVVDYGTVNPRQLPPVLDQLIFFSEATFAESPEG 508 Query: 256 NTTNPYVTQKG-VEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + G + + D++ ++ A K + E++ +LR NA Sbjct: 509 KVSELIELEDGTFQVALVNDQKPEVLRPFEEVQDEARALALAQKRNRIANEWLDELRENA 568 Query: 313 IIHY 316 I Sbjct: 569 QIEN 572 >gi|218233359|ref|YP_002367018.1| peptidylprolyl isomerase [Bacillus cereus B4264] gi|296502878|ref|YP_003664578.1| peptidylprolyl isomerase [Bacillus thuringiensis BMB171] gi|218161316|gb|ACK61308.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus B4264] gi|296323930|gb|ADH06858.1| peptidylprolyl isomerase [Bacillus thuringiensis BMB171] Length = 283 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 89/309 (28%), Gaps = 50/309 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 + + +++ + S + T + +T+ ++SK L+ Q L Sbjct: 1 MKKKKIFIGTIISCVMLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQQYGESTLY 55 Query: 74 KIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + + L+ + E K + + + F GL ED Sbjct: 56 QMMLSKALLDKYKVSDEEAKKKVEEAKDKMGENFKSTLEQLGLKNED------------- 102 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K+ + + + +K K + + Sbjct: 103 ELKEKMKPEIAFEKAIKATVTDKDVKNNYKPEMKVSHILVKD------------------ 144 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ +E ++++ G+ +F+ Sbjct: 145 ------EKTAKEIKEKVNNGEDFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAY 198 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306 K ++P T G I + DK++L +K + +++ ++ V Sbjct: 199 KLDAGQVSDPVKTTYGYHIIKVTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVN 258 Query: 307 KLRSNAIIH 315 L +A I Sbjct: 259 DLLKDADIK 267 >gi|73541077|ref|YP_295597.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha JMP134] gi|72118490|gb|AAZ60753.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha JMP134] Length = 649 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 29/269 (10%), Positives = 59/269 (21%), Gaps = 27/269 (10%) Query: 52 TDGDISKRIALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 T R+ + G + K + LI ++++++ Sbjct: 150 TPEQFDARMRFDLATQQLGTSIAGTAFVPKSLLDRLIAVRDQQRDVQALLF--KPADYAS 207 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 A E S + V E+ Sbjct: 208 KVQPDAAALKAYYESHQSAFSVPEQAKVEYVVLSGDALAASQAV----------SPEELK 257 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + E R I K Q A + L K + A Sbjct: 258 SYYDSNIARFRTEEQRRASHILIAAPKDGPAAARQAAKDKAGKLLEELRKHPDTFADVAR 317 Query: 225 KIH-----DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 K G ++ L F++ + ++ T G I + + Sbjct: 318 KQSQDPGSAEKGGDLGFMGHGALVKPFEDAMYALKDGQISDVVETDYGYHIIKLTGIKP- 376 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 E + + ++ A+ + Sbjct: 377 -SETKPLDAVRPELEAELRKQFAAKKYAE 404 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 19/145 (13%), Positives = 43/145 (29%), Gaps = 21/145 (14%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA-------------LLKLQKING 70 F + SY + SS ++G IT ++ + Q Sbjct: 23 SFVFFGVESYSRFMDSSHDVAKVDGRAITVQEVDNVVREQSERMRQMLGASYDPRQFEGP 82 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--------QHARNTGLSAEDFSS 122 L K +LI++ + E+ + +T + + ++ + + + Sbjct: 83 MLRKNVTDQLILQRVVANEVAREHLTVSNARLYEAINSIPAIAQLPRKQDGSVDDKAYVQ 142 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDV 147 L QG+ F + + Sbjct: 143 LLAAQGMTPEQFDARMRFDLATQQL 167 >gi|55980571|ref|YP_143868.1| peptidyl-prolyl cis-trans isomerase [Thermus thermophilus HB8] gi|55771984|dbj|BAD70425.1| peptidyl-prolyl cis-trans isomerase [Thermus thermophilus HB8] Length = 337 Score = 74.7 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 28/317 (8%), Positives = 72/317 (22%), Gaps = 29/317 (9%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL---- 63 + F + + + + + ++ + + E IT R L Sbjct: 17 RMRSFTRSMLAWGMRAFLLALTLLLVPMALAQGEVVAQVGPEAITREAFELRYGLFVRSA 76 Query: 64 ----------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 + + + ++ L E Q + G+ D V Sbjct: 77 LAQLGLPDTEEARALLAAYRPAFLEALAREKALLQRAREEGLYPDPAAVEARVHALKEAF 136 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 + G +++ +A + + + + + A Sbjct: 137 PEEEALEEALRQAGVPGLEAYRRLVAEAMALEAL-EARYRSRIAVSRAALKALWLLSPEY 195 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIG 232 L +++ +A R + G Sbjct: 196 RHPTLYCARHLLVPTREEVE----------EARLRLARGEAFAEVARAVSQDPGSREEGG 245 Query: 233 KAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 E P F+ ++ + P T+ G I + R + ++ Sbjct: 246 DLGCAPEGTYVPAFEEALVRLRPGEVSGPVRTEFGYHLILLE--RVVPPGRYPLEEVAPL 303 Query: 292 NTPTKIEKHEAEYVKKL 308 ++ + L Sbjct: 304 LEKEVADRAWERLEEAL 320 >gi|255322964|ref|ZP_05364100.1| ferric receptor CfrA [Campylobacter showae RM3277] gi|255299826|gb|EET79107.1| ferric receptor CfrA [Campylobacter showae RM3277] Length = 278 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 95/299 (31%), Gaps = 30/299 (10%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + + + +S+ I I E IT ++ K A L+ + N A+ L Sbjct: 5 ISFAAFFLSFCMANASQISNGIAVIIENEPITVNEVRKAAAQLQTSEAN------ALNLL 58 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I + L+ +I+ I +N + A +G+SA D S + +G FK +A Sbjct: 59 IRDRLETAQIKNLKIEASDYELNQRLQKIASESGMSASDLRSAVLSKGGDYAQFKDDVAK 118 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + ++ F N+ + + +V + + + Sbjct: 119 TIKQEKLYQSIFAEAKINISENAARAYFEQNRDLFAHFTDVSVTRYVAPSMQLLEAARHS 178 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTN 259 + S L + PQ + + +++ T Sbjct: 179 SPMNTNHSVHM---------------------DVLDLKSEQIPPQLRTIFQQTADGTFTQ 217 Query: 260 PYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + T +G E + K+ ++ + ++ EY KLR+ A + Y Sbjct: 218 IFQTPQGFEMFYVASKKGQTMPEFDEVRDEAMNALYKLEQDRVIGEYFNKLRAKANVKY 276 >gi|254428426|ref|ZP_05042133.1| PPIC-type PPIASE domain protein [Alcanivorax sp. DG881] gi|196194595|gb|EDX89554.1| PPIC-type PPIASE domain protein [Alcanivorax sp. DG881] Length = 632 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 30/274 (10%), Positives = 81/274 (29%), Gaps = 16/274 (5%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQE------LIVETLKKQEIEKSGITFDSNTVNYFF 106 + R + Q L + ++E + + E+ + + + + Sbjct: 122 RFERELRARGMNPQSYIQGLRQDMIKEQFRAGFMQTDFSLPSELNEQRRLGEQSRDIRYA 181 Query: 107 VQHARNTGLSAE-DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + F + + + ++ + + + + ++ A Sbjct: 182 QLDINSLRKQFSVSDEEVKAFYDENQGEFMRPEEFKVSYVELSADKYADQVSVTDEDVKA 241 Query: 166 NKQKMKNITVR----EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 K+I + + I N ++ + R ++A ++ + + Sbjct: 242 EYDVRKSIMEEAGAGDAPRQVSHILIEVNDDRDLEQAKVRAREAAKAIAGGESFADAAAQ 301 Query: 222 FASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK---R 276 ++ S G + + L + ++ + + + P VT GV I + + R Sbjct: 302 YSDDSGSAQSGGDLGVVSKGALPEEMEDAIADLASGTVSAPVVTDAGVHLIKVTQEETAR 361 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 L L + A + E + V KL Sbjct: 362 ALPSLAELSDQIRADLKKARAEALLNDDVAKLEE 395 Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 91/312 (29%), Gaps = 24/312 (7%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI----ALLKLQKI 68 + + +++ F I Y + + + G IT +++R+ +L+ Q Sbjct: 1 MGKVLLAAIILPFVISGFYGYFVGGSTGDVVAEVEGSKITRSVVNQRVERVRNMLREQSP 60 Query: 69 NGELE--------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSA 117 N ++ + ++ E L E+S + F V + + S Sbjct: 61 NMNPALLDSFVRPEMVLDGIVNEQLILAAAEQSSMVFSEQQVAADIYKVPLFQEDGKFSE 120 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 + F L +G+ + Q L I + ++++ + Sbjct: 121 QRFERELRARGMNPQSYIQGLRQDMIKEQFRAGFMQTDFSLPSE--LNEQRRLGEQSRDI 178 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 + + S+ + V+ + + +R + + ++ + + Sbjct: 179 RYAQLDINSLRKQFSVSDEEVKAFYDENQGEFMRPEEFKVSYVELSADKYADQVSVTDED 238 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGEIALKAYLSAQNT-PT 295 ++++ + + + P I + D RDL + Sbjct: 239 VKAEYD--VRKSIMEEAGAGDAPRQVS---HILIEVNDDRDLEQAKVRAREAAKAIAGGE 293 Query: 296 KIEKHEAEYVKK 307 A+Y Sbjct: 294 SFADAAAQYSDD 305 >gi|325851854|ref|ZP_08171019.1| PPIC-type PPIASE domain protein [Prevotella denticola CRIS 18C-A] gi|325484696|gb|EGC87609.1| PPIC-type PPIASE domain protein [Prevotella denticola CRIS 18C-A] Length = 474 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/289 (7%), Positives = 78/289 (26%), Gaps = 34/289 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 + + + + ++ + TING+ ++ + +G +++ +V E + Sbjct: 5 ALLSVALLSATMAYGQADPTIMTINGQPVSRSEFEYSYN---KNNTDGVIDRKSVDEYVP 61 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + ++ + +T+ F + + Q Sbjct: 62 LFVNYKLKVQAALDAHLDTLPAFRKEFLGYRNQQIRPAFITDADVEDEARKIYRDTKQQI 121 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + ++ + + ++ Sbjct: 122 ----------------------------DANGGLWHCAHILIGMGQHTSKEEEAAARQLA 153 Query: 203 KDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNP 260 + R N +++++ + G L + +F+ + T+ P Sbjct: 154 DSIYTALQRGADFANLAKRYSTDTSSAKNGGDLPRLQKGQTVAEFEKAMLTLKPGETSRP 213 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKL 308 ++ G I + L +L+A + ++ + + L Sbjct: 214 MLSPFGYHIIRMIGHESLPPYDSLRADIMQYIEMRGLRDQIINQRLDSL 262 >gi|169825994|ref|YP_001696152.1| foldase protein prsA 1 [Lysinibacillus sphaericus C3-41] gi|168990482|gb|ACA38022.1| Foldase protein prsA 1 precursor [Lysinibacillus sphaericus C3-41] Length = 319 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 81/311 (26%), Gaps = 49/311 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 + T L + V + S S I T + I+ D +++ L Sbjct: 1 MKKTVLSLTLAASVLALGACSGGDSKAIVTSKVGD--ISVADFNEKAKSLTGPY------ 52 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +Q+++ E + + A G S + G Sbjct: 53 --VLQQMVTEKVL-----SDKYEVTDKEFKEAYDVTASQFGDSFSQALAESGLTEEGF-- 103 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 S+ +++ + E ++ N Sbjct: 104 ------KDSLRVQLLQEKALKDQAIKEEDVKKYY---------------EQMKTELNGRH 142 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 +K K+ K + +++++ G+ + + +F + Sbjct: 143 ILVADEKTAKEVIAKIKGGAKFADVAKEYSTDTGSAEKGGELGWFSVGSMVDEFNDAAYA 202 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLG---GEIALKAYLSAQNTPTKIEK-----HEAE 303 N + P T G I I DKRD+ + + + + Sbjct: 203 LELNTLSEPVQTSFGYHVIEITDKRDVKDVGSFKDEEENIRTAMLGKLKQTGEDQVILKD 262 Query: 304 YVKKLRSNAII 314 + K+ +A + Sbjct: 263 IIAKMAKDANV 273 >gi|228939473|ref|ZP_04102061.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972327|ref|ZP_04132938.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978940|ref|ZP_04139306.1| Foldase protein prsA 1 [Bacillus thuringiensis Bt407] gi|228780814|gb|EEM29026.1| Foldase protein prsA 1 [Bacillus thuringiensis Bt407] gi|228787344|gb|EEM35312.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820173|gb|EEM66210.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 293 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 89/309 (28%), Gaps = 50/309 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 L + +++ + S + T + +T+ ++SK L+ Q L Sbjct: 11 LKKKKIFIGTIISCVMLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQQYGESTLY 65 Query: 74 KIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + + L+ + E K + + + F GL ED Sbjct: 66 QMMLSKALLDKYKVSDEEAKKKVEEAKDKMGENFKSTLEQLGLKNED------------- 112 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K+ + + + +K K + + Sbjct: 113 ELKEKMKPEIAFEKAIKATVTEKDVKDNYKPEMKVSHILVKD------------------ 154 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ +E ++++ G+ +F+ Sbjct: 155 ------EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAY 208 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306 K ++P T G I + DK++L +K + +++ ++ V Sbjct: 209 KLDAGQVSDPVKTTYGYHIIKVTDKKELKPFDEVKEKIRKDLEQQRLQDTTGKWKQQVVN 268 Query: 307 KLRSNAIIH 315 L +A I Sbjct: 269 DLLKDADIK 277 >gi|322379755|ref|ZP_08054065.1| chaperone SurA [Helicobacter suis HS5] gi|321147826|gb|EFX42416.1| chaperone SurA [Helicobacter suis HS5] Length = 371 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 87/278 (31%), Gaps = 30/278 (10%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 I T+N + IT I + + + + A+ LI++ ++ QEI++ I + + Sbjct: 119 IALTVNNDPITLYQIEMQEKVNHVN------RQQAINSLILQRIQAQEIKRLKIDIEDDK 172 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 V+ A++ G++ DF L +GI +K L Q ++++N + Sbjct: 173 VDAEIENIAKHNGMNVSDFMRTLAGEGINPVAYKAQLKKQLETRELLRNILLFNANTNSE 232 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + ++ + D + K Sbjct: 233 TKMREYYNAHRDEFTVPSDVLATRYTAKDTQTLTQALEHKDTDVPGVTKGEERISIKALN 292 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDK--RDL 278 Q L ++ T G I +K + Sbjct: 293 ---------------------PQIAQMFLSTKEHTFTPILNAGGGNYVAFYIEEKLGKQE 331 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +++ + + +K AEY +KLR A I + Sbjct: 332 VSFAQARGFIANKLIEEQQDKILAEYYEKLRVKAKIKF 369 >gi|255100589|ref|ZP_05329566.1| putative peptidyl-prolyl isomerase [Clostridium difficile QCD-63q42] Length = 318 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 105/340 (30%), Gaps = 50/340 (14%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K++ + + L+ ++ +N IT K Sbjct: 1 MNKKIYIGMVGILSLMMVGC-------------------NKSLAKVNDVEITKEQYKKTK 41 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 A+L + ++ EL KK + + N Q A++ GL+ Sbjct: 42 AVLSATNNY--INGQSLDELEKTLDKKGRNKLENVIISFMVDNELLYQEAKDKGLTPSKS 99 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKND------------------FMLKYGNLEME 162 Q + D + + V D F + + + Sbjct: 100 EVDSKYQELEDKMNLNTSYKEKMDKAGVDKDYLKQEISRDLAIDKNKKAFEDRINISDND 159 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQN------QGFVQKRIKDAEESRLRLPKDC 216 + A K E + + + +K + + ++K+ + Sbjct: 160 MEAYYTSHKKDFNVEEVSASQILISTLDKNKKEVSKDKKEALKKKADNILTKIKNGESFE 219 Query: 217 NKLEKFASK-IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICD 274 + +K++ + G+ Y + D + +F + + K +N +N + T G + + D Sbjct: 220 SLAKKYSDDKATGKNGGQLGYFTKDDKNAEFTKEVFKLKKNEVSNVFETSYGYHIVKVTD 279 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 KR+ + + + + E++KKL +A I Sbjct: 280 KRER---QKSFNECQSLIRESILNEKYIEHIKKLNEDAKI 316 >gi|297181079|gb|ADI17278.1| parvulin-like peptidyl-prolyl isomerase [uncultured alpha proteobacterium HF0070_17D04] Length = 355 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 34/300 (11%), Positives = 74/300 (24%), Gaps = 43/300 (14%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRI-RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78 FV + +V RI TI+GE I +I L + + Sbjct: 78 FVATAALCLSLVVPAQVIAQDRIAVATIDGESIWLDEIMAIAETLPPEYQQQGIA-GIYD 136 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 +L+ + N A + ++ + Sbjct: 137 QLVDDVA-----------------NSRLAAIAARSSGLDKEEDVASA---------MRTA 170 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 A + + + + + ++ + + +L Sbjct: 171 ADRVLAEAYITREVGKEITEEAIQAAYDTYVADTGSRETVTASHIL-----------VET 219 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 ++ K + + + ++ G + P F+ + Sbjct: 220 EEEAKAIIDQLMDGADFAELAREKSTGPSGPGGGSLGSFGRGQMVPAFEAAAFGMPVGSF 279 Query: 258 TN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ P TQ G I + +K E + Q + A V+ LR I Sbjct: 280 SDNPVQTQFGWHVIQVSEK--GIQEAPALDQMRDQIAANLSRQSFARIVETLRVGTTIEI 337 >gi|223040718|ref|ZP_03610986.1| ferric receptor CfrA [Campylobacter rectus RM3267] gi|222878002|gb|EEF13115.1| ferric receptor CfrA [Campylobacter rectus RM3267] Length = 278 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 95/299 (31%), Gaps = 30/299 (10%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + + + +S+ I I E IT ++ K A L+ + N A+ L Sbjct: 5 ISFAAFFLSFCMANASQISNGIAVIIENEPITVNEVRKAAAQLQTNEAN------ALNLL 58 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I + L+ +I+ I +N + A +G+SA D S + +G FK +A Sbjct: 59 IRDRLETAQIKNLKIEASDYELNQRLQKIASESGMSASDLRSAVLSKGGDYAQFKDDVAK 118 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + ++ F N+ + + +V + + + Sbjct: 119 TIKQEKLYQSIFADAKINISENAARAYFEQNRDLFAHFTDASVTRYVASSAQLLEVARHS 178 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN 259 + + L + PQ + + +++ T Sbjct: 179 SPMNTNHNVHM---------------------DVLDLKSEQIPPQLRTIFQQTPDGTFTQ 217 Query: 260 PYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + T +G E + K+ ++ + ++ EY KLR+ A + Y Sbjct: 218 IFQTPEGFEMFYVASKKGQTMPEFDEVRDEAMNALYKLEQDRVIGEYFNKLRAKANVKY 276 >gi|225862989|ref|YP_002748367.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus 03BB102] gi|225790183|gb|ACO30400.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus 03BB102] Length = 287 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 89/305 (29%), Gaps = 46/305 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + +++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKDEFYEQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKEVDKKYD--------EMKKQYGDQFDTLLKQQGIKEETLK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q ++ K + + Sbjct: 104 TGVRAQLAQEKAIEKTITDKELKDNYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G + + +F++ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGAGKMVKEFEDAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 ++ + P +Q G I + D ++ KA + + K + + + + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKAQDGEFMNDLMMKEIK 259 Query: 311 NAIIH 315 A + Sbjct: 260 KADVK 264 >gi|118476653|ref|YP_893804.1| peptidylprolyl isomerase [Bacillus thuringiensis str. Al Hakam] gi|196044235|ref|ZP_03111471.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus 03BB108] gi|229090092|ref|ZP_04221342.1| Foldase protein prsA 1 [Bacillus cereus Rock3-42] gi|229183351|ref|ZP_04310579.1| Foldase protein prsA 1 [Bacillus cereus BGSC 6E1] gi|301052687|ref|YP_003790898.1| peptidylprolyl isomerase [Bacillus anthracis CI] gi|118415878|gb|ABK84297.1| protein export protein [Bacillus thuringiensis str. Al Hakam] gi|196024874|gb|EDX63545.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus 03BB108] gi|228600135|gb|EEK57727.1| Foldase protein prsA 1 [Bacillus cereus BGSC 6E1] gi|228693169|gb|EEL46880.1| Foldase protein prsA 1 [Bacillus cereus Rock3-42] gi|300374856|gb|ADK03760.1| peptidylprolyl isomerase [Bacillus cereus biovar anthracis str. CI] Length = 287 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 89/305 (29%), Gaps = 46/305 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + +++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKDEFYEQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKEVDKKYD--------EMKKQYGDQFDTLLKQQGIKEETLK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q ++ K + + Sbjct: 104 TGVRAQLAQEKAIEKTITDKELKDNYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G + + +F++ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGAGKMVKEFEDAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 ++ + P +Q G I + D ++ KA + + K + + + + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKAQDGEFMNDLMMKEIK 259 Query: 311 NAIIH 315 A + Sbjct: 260 KADVK 264 >gi|86160748|ref|YP_467533.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-C] gi|85777259|gb|ABC84096.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-C] Length = 356 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/283 (12%), Positives = 85/283 (30%), Gaps = 33/283 (11%) Query: 43 RTTINGEVITDGDISKRIA----LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98 T NG IT G++ R+ ++ + E +K + L+ + +E E+ G+ D Sbjct: 32 VATGNGFTITAGELKARLDEQSPFIRARYSTLERKKEFLDNLVRFEVLAREAERQGLAND 91 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 + + A +++ ++ + Sbjct: 92 PEVQLTLKKVMVQKL--------------VQKNFQDASGAAAEALPEADLQKYY------ 131 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 E + + + + + + + K + +++ L + N+ Sbjct: 132 DEHKAEYYRPRRVRLAAIVWNAPAGSPERAAKVALAKKALAKLKAEEKKNTLAFAQLVNE 191 Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNL-----LKKSQNNTTNPYVTQKGVEYIAIC 273 + A + G + DL + T+ T GV + Sbjct: 192 FSEDA--ASKATAGDLGFKTREDLEKAYSKEFADVAYNLQPGATSGVLETPNGVYLVKGT 249 Query: 274 DKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 ++D +K + + K K ++KKLR +A + Sbjct: 250 GEQDELNRTFEQVKPQIQTKLYREKKTKEFDAWLKKLRDDAKV 292 >gi|254293162|ref|YP_003059185.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hirschia baltica ATCC 49814] gi|254041693|gb|ACT58488.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hirschia baltica ATCC 49814] Length = 322 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 79/314 (25%), Gaps = 56/314 (17%) Query: 16 LTTYFVLIIFC----IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 L +++ C + I + A + I T++G I DI + Sbjct: 21 LLGALIVLSACEDEQAILIQPTPTAADDAVIAATVDGYPIYVADIEMEAESQGILLAGRT 80 Query: 72 LE------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 L+ + LI + L +E EK + D + V R G Sbjct: 81 LDPSTPEFTRILNSLIDDHLLAKEAEKQNLHTDPYVQHRLKVIRERLLGNMLLSQGVDEA 140 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 +Q V+ + Sbjct: 141 SIQKYYETSINLKQLQLGEEYRVRQIVLPT------------------------------ 170 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH-P 244 ++ ++ + + + G ++ P Sbjct: 171 ------------LEAANAMIKQMTAETDFSVLASNRSIDEETRLEGGDLGFINPETAPLP 218 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + + P+ T+KG I + +KR L Q I Sbjct: 219 LANAIQNTAMGGVSKPFETRKGWVVIKVVEKRPEPL--PTLQDLRPQIWDFLIASELERL 276 Query: 305 VKKL-RSNAIIHYY 317 +KKL + +AII + Sbjct: 277 LKKLHKDSAIIRSF 290 >gi|224824910|ref|ZP_03698016.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lutiella nitroferrum 2002] gi|224602581|gb|EEG08758.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lutiella nitroferrum 2002] Length = 244 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 18/174 (10%), Positives = 53/174 (30%), Gaps = 4/174 (2%) Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 +++ + + E TV E + + + + Q + + Sbjct: 60 EHLLEREVKVPQAGDEEVERHYLANPGRYTVGELVFASHILLQVTERTPIQPLLARAEAI 119 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN--LLKKSQNNTTNPYV 262 +++ + + ++ G L D P+F+ S Sbjct: 120 LHQAQADASRFAELAREMSNCPSAQVGGSLGQLQRGDTVPEFEAVLFADGSVGVLPRVVR 179 Query: 263 TQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T+ G + + + + +++ + + +Y+++L SNA + Sbjct: 180 TRYGFHIVKVERREPGKLLPLEMARDRVASDLAEQSLSRSLQQYLERLASNAEV 233 >gi|323697783|ref|ZP_08109695.1| hypothetical protein DND132_0363 [Desulfovibrio sp. ND132] gi|323457715|gb|EGB13580.1| hypothetical protein DND132_0363 [Desulfovibrio desulfuricans ND132] Length = 370 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 35/286 (12%), Positives = 85/286 (29%), Gaps = 28/286 (9%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKIN------GELEK---IAVQELIVETLKKQEIEK 92 I +NG I + + + + +L + + +LIV+ L QE+ + Sbjct: 27 IVARVNGAPIHLSQLEFQHDQFQEDSVGAYVPSVEKLRREYGEILSDLIVQELVVQELAR 86 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 ++ + + A F L ++ I ++ L + Sbjct: 87 RDLSVTDEELRKA--EDAVRADYPEGAFDQVLVEEYIDLKSWRTQLRYYLAQKKFFQQVL 144 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 + E + + +R +L ++ V K +KD ++ L Sbjct: 145 RPQIKIDYKEAEKYYRDHISDFYLPESMR-ILVVRGPSRELVVKAVDKYLKDHDQMSLAT 203 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271 + + + E L ++ ++ + G E + Sbjct: 204 AFGEVETREVV-------------VREGRLSAPWRTALTGLKPGQASDVLTDRFGFEALV 250 Query: 272 ICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + ++ + +AY + K+E E++ + A I Sbjct: 251 LLERSEAKVLPPAQAYPLVEEALLEKKMESAFEEWLSATLAKADIQ 296 >gi|239947019|ref|ZP_04698772.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes scapularis] gi|239921295|gb|EER21319.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes scapularis] Length = 295 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 90/303 (29%), Gaps = 23/303 (7%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELE 73 L++ V + A I ++N E IT + R ++ + +L Sbjct: 4 LLLIITVFFTFNVAQASLPNIVASVNDEPITLNEFRARKKMIMALNNVESLTPAQDKQLS 63 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + ++ LI E+L Q ++ + +L + + + Sbjct: 64 DLVIKSLIDESLLFQYAGDRE--IPQEEIDNAIKSIEDRNKMPHGSLLQYLKSRSVNPDS 121 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 F + + I +++ + EI V + + Sbjct: 122 FISQIKSELIKMNILSS-LSRSVQVSNKEIDVAILSSDQKDVEISMQVFTSKDGGNKAFT 180 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 ++ R+K + + L + ++ K+ + + + + Sbjct: 181 QMNNLKNRLKKCADVKKSLYDNFATMQIITDKLSKIEG------------VKQTIIKDLT 228 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + +N + E I +C K+ L Y+ T KI + + + +R A Sbjct: 229 PDKASNVFEVNNKFEIILVCSKKILNVNEDENNYVVNFLTNKKISQKAQKMFENMRKKAA 288 Query: 314 IHY 316 I Sbjct: 289 IKI 291 >gi|237748739|ref|ZP_04579219.1| peptidyl-prolyl cis-trans isomerase [Oxalobacter formigenes OXCC13] gi|229380101|gb|EEO30192.1| peptidyl-prolyl cis-trans isomerase [Oxalobacter formigenes OXCC13] Length = 647 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 22/210 (10%), Positives = 55/210 (26%), Gaps = 8/210 (3%) Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + F +A + + F + + + Sbjct: 194 QHLFFNNAAYRSKVSVTDEELNAFYKAHEAQFTIPEHADVEVIVLDMPSVAKNIKISDAD 253 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + K+ R I NK + + K AE L + + + Sbjct: 254 LQSYYSQNKDRFSIPEERRAQHILIAVNKNATEAEKSEAKKKAEGILAELKANPARFAEL 313 Query: 223 ASKIH-----DVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276 A + G + + F + + + + ++ T G I + D + Sbjct: 314 AKANSQDPGSAQNGGDLGFFTRGKMVKPFNDAVFGMKKGDISDLVQTDFGYHIITVSDIK 373 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEY 304 ++ + + T + + AE Sbjct: 374 PAVAKPLAQVRDRVLQELTREQANRKFAEM 403 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 30/327 (9%), Positives = 81/327 (24%), Gaps = 32/327 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + +++ F++ F V + +K + + G+ IT + Sbjct: 1 MLEFIRNH-KRLTQIILLVFIIPSFIFVGVEGFKRFGDGDA-VAKVAGKSITQQEWDNAQ 58 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + E + +Q LIV+ + + + K ++ V Sbjct: 59 REQAERLRQRAAASGQPFDNKWIESSEFKWNVLQNLIVKRVLLETVNKENLSVPEQIVLQ 118 Query: 105 FFVQHA----RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + + L + L QG+ + + + Sbjct: 119 RIREIPGLIGPDGKLDEARYKEALAAQGLNPDMHFAMVRQDMAIQQLAAPIEYSAIEPTA 178 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + V+ + + + + +A+ + + Sbjct: 179 VTQRVFNLFEQEREVQHLFFNNAAYRSKVSVTDEELNAFYKAHEAQFTIPEHADVEVIVL 238 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 S ++ I Q+ ++++ + P + IA+ Sbjct: 239 DMPSVAKNIKISD----------ADLQSYYSQNKDRFSIPEERRAQHILIAVNKNATEAE 288 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKK 307 + K K + K Sbjct: 289 KSEAKKKAEGILAELKANPARFAELAK 315 Score = 40.0 bits (91), Expect = 0.49, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 64/271 (23%), Gaps = 9/271 (3%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETL-KKQEIEKSGITFDSNTVNYFFV 107 +IT DI +A K ++ +QEL E +K + Sbjct: 365 HIITVSDIKPAVA-----KPLAQVRDRVLQELTREQANRKFAEMSETFSNMVYEKPDSLK 419 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 A L+ F + I + + + + K+ +E Sbjct: 420 PVADALKLTIHSFPNLARDPAIAAKQNQLLANPKILQAIFTDDVVKGKHNTEAIEAAPQV 479 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 I T + + + L K Sbjct: 480 LVAARIAKHYPATLTPFDKVKQVITAEVINEKAQKLAKAAGEAELAKLKEGSNANGFSSS 539 Query: 228 DVSIG-KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK-RDLGGEIALK 285 + K ++L P + + K G I + L+ Sbjct: 540 IMVSRHKIAMANRAELAPVMKADVSKLPAYVGADVP-GMGYVIYRITKVVTPSNPDKNLR 598 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +S Q ++ Y+ L+ A + Sbjct: 599 EAMSKQMANVASQQDLNAYLNYLKKEAKVEI 629 >gi|332524209|ref|ZP_08400435.1| putative peptidyl-prolyl cis-trans isomerase transmembrane protein [Rubrivivax benzoatilyticus JA2] gi|332107544|gb|EGJ08768.1| putative peptidyl-prolyl cis-trans isomerase transmembrane protein [Rubrivivax benzoatilyticus JA2] Length = 635 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 22/202 (10%), Positives = 52/202 (25%), Gaps = 8/202 (3%) Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 A + + F+ Q + + E ++ ++ Sbjct: 198 AAYRAQATPGDADLQAYYEAHSGEFRAPEQAQIEYVVLDLAALAKDVAVPEEDLRRYYEE 257 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-- 227 + + R I + + AE+ + + N + A K Sbjct: 258 NASRYTQAEERRASHILIRVDPSAPADEKKAAKARAEQLLAEVRRSPNSFAEVARKNSQD 317 Query: 228 ---DVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR--DLGGE 281 G + + F++ + +N T G I + R Sbjct: 318 PGSASRGGDLDFFGRGMMAKPFEDAVYAMKTGEISNVIETDFGYHVITLTGLRGGQKKAF 377 Query: 282 IALKAYLSAQNTPTKIEKHEAE 303 ++A + + + +K AE Sbjct: 378 DTVRAEIEQEVRRSLAQKRYAE 399 Score = 42.7 bits (98), Expect = 0.075, Method: Composition-based stats. Identities = 31/292 (10%), Positives = 78/292 (26%), Gaps = 30/292 (10%) Query: 24 IFCIVPIVSYKSWAMSSRI-RTTINGEVITDGDIS----KRIALLKLQKIN--------G 70 F + Y + + + G+ I+ + I L+ Q+ Sbjct: 23 SFIFFGVQGYSRFTEGGAVTVAEVGGQAISRAEWDAAHQNNIERLRRQRPELDPKLLETP 82 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED---FSSFLDKQ 127 EL++ + L+ + + + + D + FV + GL D L Q Sbjct: 83 ELKRETLDGLVRDRVLMATARQYHLVPDDARLQRLFVTDPQFAGLRNPDGSVNREILAAQ 142 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 G+ F+Q L + V+ + + + ++ V+ Sbjct: 143 GMSVEAFEQQLRQEFGMQQVLGAVAQSSFTPPAVAATSLDALLQRREVQIQRF------- 195 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ-- 245 + + + + + + + L + P+ Sbjct: 196 -----DAAAYRAQATPGDADLQAYYEAHSGEFRAPEQAQIEYVVLDLAALAKDVAVPEED 250 Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + +++ + T + I + + A KA + Sbjct: 251 LRRYYEENASRYTQAEERRASHILIRVDPSAPADEKKAAKARAEQLLAEVRR 302 >gi|254975115|ref|ZP_05271587.1| putative peptidyl-prolyl isomerase [Clostridium difficile QCD-66c26] gi|255092504|ref|ZP_05321982.1| putative peptidyl-prolyl isomerase [Clostridium difficile CIP 107932] gi|255314242|ref|ZP_05355825.1| putative peptidyl-prolyl isomerase [Clostridium difficile QCD-76w55] gi|255516921|ref|ZP_05384597.1| putative peptidyl-prolyl isomerase [Clostridium difficile QCD-97b34] gi|255650024|ref|ZP_05396926.1| putative peptidyl-prolyl isomerase [Clostridium difficile QCD-37x79] Length = 318 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 105/340 (30%), Gaps = 50/340 (14%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K++ + + L+ ++ +N IT K Sbjct: 1 MNKKLYIGMVGILSLMMVGC-------------------NKSLAKVNDVEITKEQYKKTK 41 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 A+L + ++ EL KK + + N Q A++ GL+ Sbjct: 42 AVLSATNNY--INGQSLDELEKTLDKKGRNKLENVIISFMVDNELLYQEAKDKGLTPSKS 99 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKND------------------FMLKYGNLEME 162 Q + D + + V + F + + + Sbjct: 100 EVDSKYQELEDKMNLNTSYKEKMDKAGVDKEYLKQEISRDLAIDKNKKAFEDRINISDND 159 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQN------QGFVQKRIKDAEESRLRLPKDC 216 + A K E + + + +K + + ++K+ + Sbjct: 160 MEAYYTSHKKDFNVEEVSASQILISTLDKNKKEVSKDKKEALKKKADNILTKIKNGESFE 219 Query: 217 NKLEKFASK-IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICD 274 + +K++ + G+ Y + D + +F + + K +N +N + T G + + D Sbjct: 220 SLAKKYSDDKATGKNGGQLGYFTKDDKNAEFTKEVFKLKKNEVSNVFETSYGYHIVKVTD 279 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 KR+ + + + + E++KKL +A I Sbjct: 280 KRER---QKSFNECQSLIRESILNEKYIEHIKKLNEDAKI 316 >gi|224373789|ref|YP_002608161.1| putative periplasmic protein [Nautilia profundicola AmH] gi|223588950|gb|ACM92686.1| putative periplasmic protein [Nautilia profundicola AmH] Length = 270 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 98/296 (33%), Gaps = 32/296 (10%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 I ++ ++ + +I T+N IT ++ K + LK+ + A+Q L+ + Sbjct: 4 ILFVLSLIISLHSEVIDKIIATVNNIPITSYEVDKLASSLKIS------KDKALQYLLDQ 57 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 L + EI+K GI D + + A+ GLS +F + L Q + + + Sbjct: 58 KLIQSEIQKRGIDVDDFEIENAMEKIAKQNGLSLFEFKNIL-MQKGQYQQLRNKIKDDLL 116 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + K + E+ + K+ ++ ++ + K N+ Sbjct: 117 KEKLFNQIVQTKLKISQDELKNFYENNKDQFKIFSTVQVTKYTANNKKSLNEIKKNPLAN 176 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263 ++ ++ +++ +G ++ T Sbjct: 177 ANVKTETKVY-----------SYNELPLGLLFLFKQT------------KVGEFTPIIND 213 Query: 264 QKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + K +K ++ + K E +Y KL++ A I +Y Sbjct: 214 GLAYSMYYVARKDGSVYIPFEKVKNAIANKLAAQKREMILKDYFNKLKNRAYIKFY 269 >gi|315644371|ref|ZP_07897511.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus vortex V453] gi|315280248|gb|EFU43540.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus vortex V453] Length = 361 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 30/306 (9%), Positives = 81/306 (26%), Gaps = 8/306 (2%) Query: 10 SDFIKLLTTYFVLIIFCIVPIV-SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 FI +T + + + + +S++ G IT+ + +++ Sbjct: 10 KTFIVSITAVLSMSMIAACGNDKTEGAKEDNSKVIVKYKGGEITEKEFDLEQRMIQFMSP 69 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + E K+ + + + A + ++ + Sbjct: 70 EYAQFLQ-MDEFKEYLAKQGVAYEYLYAKADDKAKEAAEKQADDLLKQQKNGMGEDQFKA 128 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + +++ V+ K E +I + K + ++ Sbjct: 129 ALETQKLTEQDLKNYMLRVLTVMEHEKNQVSEEDIKKDFDANKKDYTNISVRHVLVSFKD 188 Query: 189 DNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF 246 K K+ E + ++++ G + PQF Sbjct: 189 AEGKDRPEGEALKIAKEVENKLNKGEDFAAVAKEYSQDPASKDKGGLIENKPAGSWVPQF 248 Query: 247 QNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI---ALKAYLSAQNTPTKIEKHEA 302 + N + P T G + + + ++ + K + + KI+ Sbjct: 249 KEKALTLELNKISAPVETDYGYHVMKVEKREEVAYDKLPADQKEGILNELASAKIDNFMQ 308 Query: 303 EYVKKL 308 + L Sbjct: 309 NELNDL 314 >gi|313672045|ref|YP_004050156.1| sura domain [Calditerrivibrio nitroreducens DSM 19672] gi|312938801|gb|ADR17993.1| SurA domain [Calditerrivibrio nitroreducens DSM 19672] Length = 298 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 30/305 (9%), Positives = 84/305 (27%), Gaps = 22/305 (7%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS----KRIALL-------KLQKINGEL 72 + ++ IV + +RI + +IT ++ R+ + K + Sbjct: 1 MILLLTIVQQSRSEIINRILAVVGNNIITQYEVESFNPNRVKEIYSIQDEDKRSQAIKTY 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 K + L+ + ++ +K + + +S +D L K+GI Sbjct: 61 YKNVLDFLVEQYTLEEIGKKYNVVVTEKEAEEAIDDIIKRNNISVKDLEEALAKEGITMA 120 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + + + E +I + + + D Sbjct: 121 QYRWQIKMDILATRLKSRVINQLVVITENDIKKYVDEHQKEIGSYDEYELRYILLKDPSK 180 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 ++ +F+ + G ++ L + +K Sbjct: 181 LT----------EVRKLIKEKGFIAAAIQFSEDKTGKNGGYLGFVNIEHLTKDIKEKVKD 230 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + V+ + + + + A T + +++K + Sbjct: 231 LKPKELVEIESGNEVKIFYVESIKSRYDLSKDQREKVIAALMDTMYKDVYKSWLEKNKEA 290 Query: 312 AIIHY 316 I Y Sbjct: 291 IFIRY 295 >gi|294338772|emb|CAZ87106.1| putative peptidyl-prolyl isomerase [Thiomonas sp. 3As] Length = 274 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 31/288 (10%), Positives = 82/288 (28%), Gaps = 46/288 (15%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 + + S A +++ ++G IT + + A+ ++ + V++L + L Sbjct: 11 LTLSLALSCAAQAQVVLRVDGHPIT---LEEAEAVNPQAADQPQVRQQVVEQLAQQQLLA 67 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 ++ ++ L Q++ Sbjct: 68 DALKSVPPQA------------------------------QARIEAGQKNLRRQALAQLS 97 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + E A ++ + ++ R+Y +R ++ P ++ + + Sbjct: 98 AEAFLQAHPISQEAIRQAYEKHIADLPTRQYWLRWIVVKTP----------EEAKRVLDA 147 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ-FQNLLKKSQNNTTNPYVTQKG 266 R + + G + E + + + K P + Sbjct: 148 LRGGKQTFTALALHHSIGQNAELGGALGWQSEQAMSAEVLGVVRKLQPGQVAGPIALGEN 207 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + I + +R L Q + +V++L NA I Sbjct: 208 LAIIQLVAERTPP--KPDFEQLKPQIEQQLRQAALQAHVQELAKNAKI 253 >gi|228913728|ref|ZP_04077354.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845920|gb|EEM90945.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 287 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 89/305 (29%), Gaps = 46/305 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + +++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKDEFYEQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKEVDKKYD--------EMKKQYGDQFDTLLKQQGIKEETLK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q ++ K + + Sbjct: 104 TSVRAQLAQEKAIEKTITDKELKDNYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G + + +F++ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGAGKMVKEFEDAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 ++ + P +Q G I + D ++ KA + + K + + + + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKAQDGEFMNDLMMKEIK 259 Query: 311 NAIIH 315 A + Sbjct: 260 KADVK 264 >gi|114321433|ref|YP_743116.1| hypothetical protein Mlg_2284 [Alkalilimnicola ehrlichii MLHE-1] gi|114227827|gb|ABI57626.1| hypothetical protein Mlg_2284 [Alkalilimnicola ehrlichii MLHE-1] Length = 484 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 35/368 (9%), Positives = 95/368 (25%), Gaps = 59/368 (16%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + +++ ++ + + F +V SY + R+ + G IT +++R Sbjct: 1 MLEAIRSAVKGWVAWAVVIVISLPFIVVGGYSYFA-GDDGRVVAEVEGVEITREQVAERA 59 Query: 61 ALLKLQK------------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + Q L + A LI E L + + V Q Sbjct: 60 RQQQRQLEEFFGDLGAAGVDESTLRREARDGLIEEALLHVLVTDGNLRVGDRAVAQRIRQ 119 Query: 109 ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV------------------ 147 + S E + L + + +++ + + Sbjct: 120 QDIFHQGGTFSMERYQQLLSANRLTPDQYEEMVRRDLLVEQFQRAVTGSALVRDWDTARL 179 Query: 148 -----VKNDFMLKYGNLEM------EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + D + + + +N + L I ++ + Sbjct: 180 AALDRQQRDIHYLVVSADEAPDAVSDAAVQAHYEENAERYTAPRQVRLEYIELHQDELAP 239 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES----------DLHPQF 246 R + E + + + A+ + V + + ++ E ++ Sbjct: 240 DDSTRFFELTEDAANVAYEDPDSLQSAADLLGVELSYSDWVPEDGSAEGLWGRPEVVEAA 299 Query: 247 QNLLKKSQNNTTNPYVTQKGV-EYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAE 303 + + G + + D R+ + + + + Sbjct: 300 FSDDVLEFGYNSELIELGSGHALLLRVDDVREAEPLGLDEVADEIRRELAREQGRLQARN 359 Query: 304 YVKKLRSN 311 + +L Sbjct: 360 -LGELLER 366 >gi|126699161|ref|YP_001088058.1| putative peptidyl-prolyl isomerase [Clostridium difficile 630] gi|255306527|ref|ZP_05350698.1| putative peptidyl-prolyl isomerase [Clostridium difficile ATCC 43255] gi|115250598|emb|CAJ68422.1| putative peptidylprolyl isomerase [Clostridium difficile] Length = 318 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 105/340 (30%), Gaps = 50/340 (14%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K++ + + L+ ++ +N IT K Sbjct: 1 MNKKLYIGMVGILSLMMVGC-------------------NKSLAKVNDVEITKEQYKKTK 41 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 A+L + ++ EL KK + + N Q A++ GL+ Sbjct: 42 AVLSATNNY--INGQSLDELEKTLDKKGRNKLENVIISFMVDNELLYQEAKDKGLTPSKS 99 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKND------------------FMLKYGNLEME 162 Q + D + + V D F + + + Sbjct: 100 EVDSKYQELEDKMNLNTSYKEKMDKAGVDKDYLKQEISRDLAIDKNKKAFEDRINISDND 159 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQN------QGFVQKRIKDAEESRLRLPKDC 216 + A K E + + + +K + + ++K+ + Sbjct: 160 MEAYYTSHKKDFNVEEVSASQILISTLDKNKKEVSKDKKEALKKKADNILTKIKNGESFE 219 Query: 217 NKLEKFASK-IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICD 274 + +K++ + G+ Y + D + +F + + K +N +N + T G + + D Sbjct: 220 SLAKKYSDDKATGKNGGQLGYFTKDDKNAEFTKEVFKLKKNEVSNVFETSYGYHIVKVTD 279 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 KR+ + + + + E++KKL +A I Sbjct: 280 KRER---QKSFNECQSLIRESILNEKYIEHIKKLNEDAKI 316 >gi|77165248|ref|YP_343773.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus oceani ATCC 19707] gi|254434944|ref|ZP_05048452.1| PPIC-type PPIASE domain protein [Nitrosococcus oceani AFC27] gi|76883562|gb|ABA58243.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus oceani ATCC 19707] gi|207091277|gb|EDZ68548.1| PPIC-type PPIASE domain protein [Nitrosococcus oceani AFC27] Length = 640 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 23/208 (11%), Positives = 60/208 (28%), Gaps = 8/208 (3%) Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 Y V A + F+ ++ + + + E + Sbjct: 193 YSIVPSATFRDVIEVSADKVRQYYDDHPEEFRIPEQVKVHYLRLTADSLATDIPLDEQTL 252 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK---LE 220 ++ ++ R I ++ Q+ + AE RL + + + Sbjct: 253 RDFYEESEDQYRVPERRRASHILITVPPQGDEATRQQAQEKAEAVFERLQQGEDFEEVAK 312 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKR- 276 + + G + + P F+ + + + P +++ G I + D Sbjct: 313 EVSDDPGSAQKGGDLGFFGRGVMDPAFEEAVFSLEETGALSEPVLSKFGYHIIKLTDIEA 372 Query: 277 -DLGGEIALKAYLSAQNTPTKIEKHEAE 303 ++ A+ L+ + E+ E Sbjct: 373 GEVKPFEAVSEELAQRYRRQIAEEQFYE 400 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 23/229 (10%), Positives = 62/229 (27%), Gaps = 15/229 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + I F + I +Y + + ++NGE I+ + Sbjct: 1 MLEAIRNRAQGIFAWVIVGLIAIPFTLWGINNYMLDGGEA-LAASVNGEEISTREFRSAF 59 Query: 61 ALLKLQKI-------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 Q + ++ ++ L+ + L K G+ ++++ Sbjct: 60 LSYTQQLRFLMGASFPEEMLDDPATKQNVIEGLVEQRLVLDTAAKLGLGMSDSSLSQVIR 119 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML-KYGNLEMEIPAN 166 + G S + S + + + + + + Sbjct: 120 SNKAFQGESGQFDSQRYEAVLGSQGLTPVAYEARLRSALLSEQLVSTLRLSAFTTQQEVE 179 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 RE V + + ++ ++ D R+P+ Sbjct: 180 AIARLQQQKREIGYSIVPSATFRDVIEVSADKVRQYYDDHPEEFRIPEQ 228 >gi|89100857|ref|ZP_01173708.1| post-translocation molecular chaperone [Bacillus sp. NRRL B-14911] gi|89084443|gb|EAR63593.1| post-translocation molecular chaperone [Bacillus sp. NRRL B-14911] Length = 289 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 32/307 (10%), Positives = 90/307 (29%), Gaps = 37/307 (12%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + I + SS + IT ++ + ++ Sbjct: 1 MKKWMLSLSIAAGVIGLSACSSNAEDSSEVVVETKAGDITKDELYNAMK--------DKV 52 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + A+QEL+ + + +N + + G + E + Sbjct: 53 GEQAIQELVYKKVL-----SEKYKVTDEELNEKIDELKQQLGANFEMALA------QYGY 101 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ L + + + E E+ K +++ Sbjct: 102 EDEEDLKETFKTGLLQEKAAIKDVEATEKEVKEYYDNYKPEIKARHIL------------ 149 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ ++ K + +++ + G + + P+F+ Sbjct: 150 ---VEDEKTAKEVKKKLDEGAKFEDLATEYSQDPGSAANGGDLGWFGAGKMVPEFEEAAY 206 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE-KHEAEYVKKLR 309 N + P T+ G I +K++ +K + + +K++ + + + Sbjct: 207 ALDVNEISEPVKTEHGYHIIQTTEKKEKKSFEEMKEKMEYEVKVSKLDGEKIQAAMDREL 266 Query: 310 SNAIIHY 316 +A + + Sbjct: 267 KDANVKF 273 >gi|163790772|ref|ZP_02185198.1| peptidylprolyl isomerase [Carnobacterium sp. AT7] gi|159873952|gb|EDP68030.1| peptidylprolyl isomerase [Carnobacterium sp. AT7] Length = 339 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 27/297 (9%), Positives = 74/297 (24%), Gaps = 35/297 (11%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 L++ + + S + IT+ + + + +Q+LI Sbjct: 4 LLLATATILAGFTIAGCSDSTVASSTAGKITEEEFYAEMK--------DTVGSSMLQQLI 55 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 +E + + + + + + + Sbjct: 56 IEDVLTDLYGDKVTDKVVDKQYTTEETSM--------GGAEAFEYLMLQQGYTPEKYKDT 107 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 +++ K + EI +++ + + Sbjct: 108 IRLNLLIEAAVKDKTKFTKEEIQTAYDAYVPSVKAAHIL---------------VEDEAK 152 Query: 202 IKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT-N 259 KD ++ + + G+ + + + + T Sbjct: 153 AKDLIAQLNDGADFAKLAKENSADTATAANGGEVTFSSGEMVPEFEEAAYALKEGEMTTE 212 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI--EKHEAEYVKKLRSNAII 314 P T+ G I + DK + G + Q TK+ + + + + +A I Sbjct: 213 PVATEYGFHIIKMIDKPEKGTLKEETDTIKDQLLQTKLADSAYIQKVMSGIMKDANI 269 >gi|17989299|ref|NP_541932.1| peptidyl-prolyl cis-trans isomerase C [Brucella melitensis bv. 1 str. 16M] gi|256043213|ref|ZP_05446151.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 1 str. Rev.1] gi|260564427|ref|ZP_05834912.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 1 str. 16M] gi|265989641|ref|ZP_06102198.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 1 str. Rev.1] gi|17985164|gb|AAL54196.1| peptidyl-prolyl cis-trans isomerase c [Brucella melitensis bv. 1 str. 16M] gi|260152070|gb|EEW87163.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 1 str. 16M] gi|263000310|gb|EEZ13000.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 1 str. Rev.1] Length = 271 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 30/280 (10%), Positives = 78/280 (27%), Gaps = 40/280 (14%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG I + DI + L A + E L ++ Sbjct: 11 AVSVNGVTIDEADILTEAQNHPAENPGAALLSAARALAVRELLLQRAR------------ 58 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 ++ + D + ++ V++ + + E Sbjct: 59 ------------------EIGIEPEHEKDAEGRAETDEDALVRMVIEREVDV-PSASRDE 99 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220 + ++ ++ I + + R + + + Sbjct: 100 AQRYYENNRHRFTSAPILEASHILIAADPADQETRDAARQTATRLAAAVIAEPATFASVA 159 Query: 221 -KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN--PYVTQKGVEYIAICDKR- 276 +++S G L P+F+ L++ T P ++ G + + D+R Sbjct: 160 LEYSSCPSGAQGGNLGQLTRGSTVPEFERALERMTPGETTANPIESRFGYHIVRL-DRRV 218 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ + K ++Y+ L + A I Sbjct: 219 EGEELPFDYVADKIAGWLEASTWSKAVSQYIAILAAEAEI 258 >gi|332878100|ref|ZP_08445830.1| PPIC-type PPIASE domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684062|gb|EGJ56929.1| PPIC-type PPIASE domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 479 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 29/306 (9%), Positives = 76/306 (24%), Gaps = 50/306 (16%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + ++ F + C + + + + ING+ + + Sbjct: 1 MMETMRKF---------ALWCCSLCLTGVLYAQGNDPVVMKINGKDVPRSEFE------- 44 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 E + ++ + E + K + + + + Sbjct: 45 YNFNKNNGENVVDKKTVDEYVDLFVNYKLKVEAALDARYDTLSSFKKEFRTYRDQQI--- 101 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + + E E+ MK + LI Sbjct: 102 -------------------------RPYFVSVSAEEKELKRYYDGMKASIGPDGLIHPAH 136 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK----FASKIHDVSIGKAQ-YLLE 239 I + K + + L + + A K G + + Sbjct: 137 IMILVAQKATPEEQAKAKERIDSIYTALQQGADFATLAKQCSADKGSAARGGDLGGWFAK 196 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 +F+++ ++ + P+ + G + + D++ L LK L ++ Sbjct: 197 GQTMKEFEDVAFSLNKGEMSKPFQSPMGYHIVLMKDRKQLESYEELKPQLQRFLESRGLK 256 Query: 299 KHEAEY 304 + A Sbjct: 257 ERVASM 262 >gi|206971674|ref|ZP_03232624.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus AH1134] gi|206733659|gb|EDZ50831.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus AH1134] Length = 283 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 88/309 (28%), Gaps = 50/309 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 + + +++ + S + T + +T+ ++SK L+ Q L Sbjct: 1 MKKKKIFIGTIISCMMLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQQYGESTLY 55 Query: 74 KIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + + L+ + E K + + + F GL ED Sbjct: 56 QMMLSKALLDKYKVSDEEAKKKVEEAKDKMGENFKSTLEQLGLKNED------------- 102 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K+ + + + +K K + + Sbjct: 103 ELKEKMKPEIAFEKAIKATVTDKDVKDNYKPEMKVSHILVKD------------------ 144 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ +E ++++ G+ +F+ Sbjct: 145 ------EKTAKEIKEKVNNGEDFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAY 198 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306 K + P T G I + DK++L +K + +++ ++ V Sbjct: 199 KLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVN 258 Query: 307 KLRSNAIIH 315 L +A I Sbjct: 259 DLLKDADIK 267 >gi|261855012|ref|YP_003262295.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halothiobacillus neapolitanus c2] gi|261835481|gb|ACX95248.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halothiobacillus neapolitanus c2] Length = 645 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 21/250 (8%), Positives = 63/250 (25%), Gaps = 13/250 (5%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITF----DSNTVNYFFVQHARNTGLSAEDFSSFL 124 ++ ++ I E+ E I + ++A + Sbjct: 154 KQDIVMQTLENAISESTIVTAPELDQIVKLRDQTREIGMVRLDRARVIDTVAAPTDGAIE 213 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 F + ++ + ++ + ++ + + Sbjct: 214 AYYAAHKGEFIRPERVKLRYIELSPKTLAPSVKVTDAQVEQAYANYVKKQEAQVVRTVRH 273 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRL----PKDCNKLEKFASKI-HDVSIGKAQYLLE 239 I K + ++ A +R + ++ + G + Sbjct: 274 ILISVPKNADGAAIEAAKNKALAARAAIVSGKTSFADEARAVSDDPGSKNKGGDLGEVAP 333 Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 + F+ + + P TQ G I + ++ +I A + + E Sbjct: 334 GQMVKPFEEAMDALKVGEVSEPVRTQFGWHLIEVT--KESHPDIKPLADMRDKMVAEVQE 391 Query: 299 KHEAE-YVKK 307 + + Y + Sbjct: 392 QQVEKIYYNE 401 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 19/194 (9%), Positives = 57/194 (29%), Gaps = 17/194 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I + I F + + Y S + ++G I+ + + Sbjct: 1 MLMDLRERIQGWIAYAIIGLISIPFVLWGVGEYFSGGKNQP-VAEVDGLPISQQAFEQAV 59 Query: 61 ALLKL-------------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + + L++ + ++I E + + ++K+G V Sbjct: 60 SQQRQAIIQKLGGSVSAEMLQSLNLDQQVLDQMINERVLRVFVQKAGFRAPDAVVADLIR 119 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + + + +F+ +G +F+ L + + Sbjct: 120 SEPAFKTDGAFDVKKYEAFVAARGTTVANFEAGLKQDIVMQTLENAISESTIVTAPELDQ 179 Query: 165 ANKQKMKNITVREY 178 K + + + Sbjct: 180 IVKLRDQTREIGMV 193 >gi|326317152|ref|YP_004234824.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373988|gb|ADX46257.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 261 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 92/305 (30%), Gaps = 49/305 (16%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELE 73 + + + + + A++ +NG+ + + ++ E+E Sbjct: 1 MKKKLLSGLVAAAVLGTSALPAIAQN-VAVVNGKAVPKERVEVLKQQVERSGRPITPEIE 59 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +E+I + QE +K G+ N + Sbjct: 60 GQIKEEVIAREIFLQEAQKRGLEGSQNVKDQ----------------------------- 90 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 LA Q+I + D+ + EI A K + + + +++ + Sbjct: 91 --MELARQTILIRELFADYQKANPVTDAEIQAEYDKYVAANTGKEYKASHILVETEDQAK 148 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLK 251 K + K + +K + G + S +F Q L+K Sbjct: 149 AIIASIK----------KGAKFEDIAKKQSKDPGSGARGGDLDWATPSSYVAEFTQALVK 198 Query: 252 KSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + T P TQ G I + D R+ + Q ++ A++ + LR+ Sbjct: 199 LDKGKMTQTPVKTQFGWHVIRLDDVREAKL--PKLDEVKPQIAQQLQQQKLAKFQEDLRA 256 Query: 311 NAIIH 315 A + Sbjct: 257 KAKVE 261 >gi|228958588|ref|ZP_04120307.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801099|gb|EEM47997.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 293 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 32/308 (10%), Positives = 86/308 (27%), Gaps = 48/308 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 L + +++ + S + T + +T+ ++SK L+ Q L Sbjct: 11 LKKKKIFIGTIISCVMLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQQYGESTLY 65 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++ + + +++ K + + S+ ++ Sbjct: 66 QMMLSKTLLDKYKV------------SDEEAKKKVEEAKDKMGENFKSTLEQLGLKNEDE 113 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 K+ + + + +K K + + Sbjct: 114 LKEKMKPEIAFEKAIKATVTDKDVKNNYKPEMKVSHILVKD------------------- 154 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 +K K+ +E ++++ G+ +F+ K Sbjct: 155 -----EKTAKEIKEKVNNGEDFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAYK 209 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKK 307 ++P T G I + DK++L +K + +++ ++ V Sbjct: 210 LDAGQVSDPVKTTYGYHIIKVTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVND 269 Query: 308 LRSNAIIH 315 L +A I Sbjct: 270 LLKDADIK 277 >gi|255655579|ref|ZP_05400988.1| putative peptidyl-prolyl isomerase [Clostridium difficile QCD-23m63] gi|296451569|ref|ZP_06893304.1| probable peptidyl-prolyl isomerase [Clostridium difficile NAP08] gi|296878826|ref|ZP_06902826.1| probable peptidyl-prolyl isomerase [Clostridium difficile NAP07] gi|296259634|gb|EFH06494.1| probable peptidyl-prolyl isomerase [Clostridium difficile NAP08] gi|296430098|gb|EFH15945.1| probable peptidyl-prolyl isomerase [Clostridium difficile NAP07] Length = 318 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 104/340 (30%), Gaps = 50/340 (14%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K++ + + L+ ++ +N IT K Sbjct: 1 MNKKLYIGMVGILSLMMVGC-------------------NKSLAKVNDVEITKEQYKKTK 41 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 A+L + ++ EL KK + + N Q A++ GL+ Sbjct: 42 AVLSATNNY--INGQSLDELEKTLDKKGRNKLENVIISFMVDNELLYQEAKDKGLTPSKS 99 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKND------------------FMLKYGNLEME 162 Q + D + + V + F + + + Sbjct: 100 EVDSKYQELEDKMNLNTSYKEKMDKAGVDKEYLKQEISRDLAIDKNKKAFEDRINISDND 159 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQN------QGFVQKRIKDAEESRLRLPKDC 216 + A K E + + + +K + + ++K+ + Sbjct: 160 MEAYYTSHKKDFNVEEISASQILISTLDKNKKEVSKDKKEALKKKADNILTKIKNGESFE 219 Query: 217 NKLEKFASK-IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICD 274 + +K++ + G+ Y + D + +F + + K +N + + T G + + D Sbjct: 220 SLAKKYSDDKATGKNGGQLGYFSKDDKNAEFTKEVFKLKKNEVSKVFETSYGYHIVKVTD 279 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 KR+ + + + + E++KKL +A I Sbjct: 280 KRER---QKSFNECQSLIRESILNEKYIEHIKKLNEDAKI 316 >gi|170698305|ref|ZP_02889381.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria IOP40-10] gi|170136796|gb|EDT05048.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria IOP40-10] Length = 282 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 36/322 (11%), Positives = 80/322 (24%), Gaps = 57/322 (17%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQK 67 + + + +P+ + A + T+NG ITD +++ + K Q Sbjct: 1 MQMTFNRILIATAIAWQMALPVQAQAQSASLPAGSVATVNGTPITDAEVNAVLQASK-QP 59 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 ++ + +LI L +Q EK+ A Sbjct: 60 DTPQIRQAIKNQLIARVLIQQAAEKAKYGDKPEVQAAMQAAKANAE-------------- 105 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 +K++ + + ++ E R ++ Sbjct: 106 ----------------AQLYLKDNIKPAPVTDAQVKARYDEIVGSLGKEEVKPRIIVVKD 149 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD------ 241 ++ +++ + G+ ++ Sbjct: 150 AATAATVLAQLKA-----------GQTFDALARQYSQAPSAGAGGELPWVSFKMPLVEGN 198 Query: 242 -----LHPQFQNLLKKSQNNTTNPYVTQKGV-EYIAICDKRD--LGGEIALKAYLSAQNT 293 L + T + G + I KR + ++ + Q Sbjct: 199 TQGLPLPVAQAMTKLPAGGVTADFIPLGNGARAIVKIDAKRPTQVPAYDTAQSTIRQQLQ 258 Query: 294 PTKIEKHEAEYVKKLRSNAIIH 315 EK AE V L +A I Sbjct: 259 ALAFEKATAELVGGLLKDAKIQ 280 >gi|294627916|ref|ZP_06706495.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292597830|gb|EFF41988.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 656 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 15/147 (10%), Positives = 44/147 (29%), Gaps = 4/147 (2%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 +K + + + L +L S + + K K A E++ + Sbjct: 274 KRYEDEKARFVEPEQRLASHILISAGPDAAAQKAAEAKAAKLAAEAKQTGTDFAALAKAN 333 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + + G ++ + + F++ P ++ G I + + + G Sbjct: 334 SQDPGSKDAGGDLGWVEKGTMVKPFEDALFSMKAGEVVGPIKSEFGYHVIQLREVKGGQG 393 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + Q +++ + Sbjct: 394 KS--FEQVRDQLAAEQLKADADKAFAD 418 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 23/192 (11%), Positives = 47/192 (24%), Gaps = 34/192 (17%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-------------- 46 M K+ S +I ++I F V SY ++ + Sbjct: 1 MLQKLRDKTSGWIATAILGLLMIPFLFVIDNSYLGGIGANN-VAKVQAPPTWWKSAPSWW 59 Query: 47 ------NGEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++Q+ + EK + +L+ E + + Sbjct: 60 PVSLLWQHHEISTQDFRARFEQARMQERQRQGEKFDPRTFESRENKLQVLDQLVDEQVVR 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E +GI TV + + G + + Sbjct: 120 LGAEDAGIVIGDATVRDYIANIPAFQVDGKFSPDQYRAALAQGTPPRTPAQFDALVSDSL 179 Query: 148 VKNDFMLKYGNL 159 ++ Sbjct: 180 QQSVIPQAVAES 191 >gi|189220090|ref|YP_001940730.1| Parvulin-like peptidyl-prolyl isomerase [Methylacidiphilum infernorum V4] gi|189186948|gb|ACD84133.1| Parvulin-like peptidyl-prolyl isomerase [Methylacidiphilum infernorum V4] Length = 283 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 36/289 (12%), Positives = 88/289 (30%), Gaps = 44/289 (15%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + S S ++ +NG I + + + K + + + A+ L+ + + QE Sbjct: 29 LYSQGDLVESDQLLAIVNGVEIRKSYVLAELKKAGIVKPDSQAIQNALASLVQQEILYQE 88 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 K + + + +++ VV+ Sbjct: 89 AMKLEMEKSKELLRAQ------------------------------EEFNRKALTELVVQ 118 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + Q +K++ EY IR ++ L+ ++K Sbjct: 119 KKIRSQPPSEGELRLRYSQLLKSLPKEEYKIRHIVLPTRRKALEVMERLKK--------- 169 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH-PQFQNLLKKSQNNTTNPYVTQKGVE 268 + K G+ + ++ L + + K P ++ G E Sbjct: 170 --GENFSLLAMESLEKQTADRGGELGWQNKATLVLSAYSLIQKLKPGQVGGPILSSMGWE 227 Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 I + R L L Q +++ +YV++L +++ + + Sbjct: 228 LIELLAVRPLRV--PSYEELKPQLIQQIEQENLKKYVQELIASSRVQIF 274 >gi|62317782|ref|YP_223635.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 1 str. 9-941] gi|83269763|ref|YP_419054.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis biovar Abortus 2308] gi|189023035|ref|YP_001932776.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus S19] gi|237817322|ref|ZP_04596314.1| Chaperone surA precursor [Brucella abortus str. 2308 A] gi|254699074|ref|ZP_05160902.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 2 str. 86/8/59] gi|254732517|ref|ZP_05191095.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 4 str. 292] gi|260545017|ref|ZP_05820838.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus NCTC 8038] gi|260760321|ref|ZP_05872669.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 4 str. 292] gi|260763561|ref|ZP_05875893.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 2 str. 86/8/59] gi|62197975|gb|AAX76274.1| hypothetical peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 1 str. 9-941] gi|82940037|emb|CAJ13074.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis biovar Abortus 2308] gi|189021609|gb|ACD74330.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus S19] gi|237788135|gb|EEP62351.1| Chaperone surA precursor [Brucella abortus str. 2308 A] gi|260098288|gb|EEW82162.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus NCTC 8038] gi|260670639|gb|EEX57579.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 4 str. 292] gi|260673982|gb|EEX60803.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 2 str. 86/8/59] Length = 311 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 30/280 (10%), Positives = 78/280 (27%), Gaps = 40/280 (14%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG I + DI + L A + E L ++ Sbjct: 51 AVSVNGVTIDEADILTEAQNHPAENPGAALLSAARALAVRELLLQRAR------------ 98 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 ++ + D + ++ V++ + + E Sbjct: 99 ------------------EIGIEPEHEKDAEGRAETDEDALVRMVIEREVDV-PSASRDE 139 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220 + ++ ++ I + + R + + + Sbjct: 140 AQRYYENNRHRFTSAPILEASHILIAADPADQETRDAARQTATRLAAAVIAEPATFASVA 199 Query: 221 -KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN--PYVTQKGVEYIAICDKR- 276 +++S G L P+F+ L++ T P ++ G + + D+R Sbjct: 200 LEYSSCPSGAQGGNLGQLTRGSTVPEFERALERMTPGETTANPIESRFGYHIVRL-DRRV 258 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ + K ++Y+ L + A I Sbjct: 259 EGEELPFDYVADKIAGWLEASTWSKAVSQYIAILAAEAEI 298 >gi|225686140|ref|YP_002734112.1| chaperone SurA [Brucella melitensis ATCC 23457] gi|254706164|ref|ZP_05167992.1| Chaperone surA precursor [Brucella pinnipedialis M163/99/10] gi|254711538|ref|ZP_05173349.1| Chaperone surA precursor [Brucella pinnipedialis B2/94] gi|256015078|ref|YP_003105087.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella microti CCM 4915] gi|256029827|ref|ZP_05443441.1| Chaperone surA precursor [Brucella pinnipedialis M292/94/1] gi|256059473|ref|ZP_05449675.1| Chaperone surA precursor [Brucella neotomae 5K33] gi|256111792|ref|ZP_05452763.1| Chaperone surA precursor [Brucella melitensis bv. 3 str. Ether] gi|256157997|ref|ZP_05455915.1| Chaperone surA precursor [Brucella ceti M490/95/1] gi|256253044|ref|ZP_05458580.1| Chaperone surA precursor [Brucella ceti B1/94] gi|256262736|ref|ZP_05465268.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 2 str. 63/9] gi|261220140|ref|ZP_05934421.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti B1/94] gi|261313606|ref|ZP_05952803.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella pinnipedialis M163/99/10] gi|261319154|ref|ZP_05958351.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella pinnipedialis B2/94] gi|261323445|ref|ZP_05962642.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella neotomae 5K33] gi|265986843|ref|ZP_06099400.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella pinnipedialis M292/94/1] gi|265993257|ref|ZP_06105814.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 3 str. Ether] gi|265996512|ref|ZP_06109069.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti M490/95/1] gi|225642245|gb|ACO02158.1| Chaperone surA precursor [Brucella melitensis ATCC 23457] gi|255997738|gb|ACU49425.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella microti CCM 4915] gi|260918724|gb|EEX85377.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti B1/94] gi|261298377|gb|EEY01874.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella pinnipedialis B2/94] gi|261299425|gb|EEY02922.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella neotomae 5K33] gi|261302632|gb|EEY06129.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella pinnipedialis M163/99/10] gi|262550809|gb|EEZ06970.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti M490/95/1] gi|262764127|gb|EEZ10159.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 3 str. Ether] gi|263092541|gb|EEZ16776.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 2 str. 63/9] gi|264659040|gb|EEZ29301.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella pinnipedialis M292/94/1] gi|326410475|gb|ADZ67539.1| chaperone SurA [Brucella melitensis M28] gi|326553767|gb|ADZ88406.1| chaperone SurA [Brucella melitensis M5-90] Length = 311 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 30/280 (10%), Positives = 78/280 (27%), Gaps = 40/280 (14%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG I + DI + L A + E L ++ Sbjct: 51 AVSVNGVTIDEADILTEAQNHPAENPGAALLSAARALAVRELLLQRAR------------ 98 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 ++ + D + ++ V++ + + E Sbjct: 99 ------------------EIGIEPEHEKDAEGRAETDEDALVRMVIEREVDV-PSASRDE 139 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220 + ++ ++ I + + R + + + Sbjct: 140 AQRYYENNRHRFTSAPILEASHILIAADPADQETRDAARQTATRLAAAVIAEPATFASVA 199 Query: 221 -KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN--PYVTQKGVEYIAICDKR- 276 +++S G L P+F+ L++ T P ++ G + + D+R Sbjct: 200 LEYSSCPSGAQGGNLGQLTRGSTVPEFERALERMTPGETTANPIESRFGYHIVRL-DRRV 258 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ + K ++Y+ L + A I Sbjct: 259 EGEELPFDYVADKIAGWLEASTWSKAVSQYIAILAAEAEI 298 >gi|254695417|ref|ZP_05157245.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 3 str. Tulya] gi|261215795|ref|ZP_05930076.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 3 str. Tulya] gi|260917402|gb|EEX84263.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 3 str. Tulya] Length = 311 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 30/280 (10%), Positives = 78/280 (27%), Gaps = 40/280 (14%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG I + DI + L A + E L ++ Sbjct: 51 AVSVNGVTIDEADILTEAQNHPAENPGAALLSAARALAVRELLLQRAR------------ 98 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 ++ + D + ++ V++ + + E Sbjct: 99 ------------------EIGIEPEHEKDAEGRAETDEDALVRMVIEREVDV-PSASRDE 139 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220 + ++ ++ I + + R + + + Sbjct: 140 AQRYYENNRHRFTSAPILEASHILIAADPADQETRDAARQTATRLAAAVIAEPATFASVA 199 Query: 221 -KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN--PYVTQKGVEYIAICDKR- 276 +++S G L P+F+ L++ T P ++ G + + D+R Sbjct: 200 LEYSSCPSGAQGGNLGQLTRGSTVPEFERALERMTPGETTANPIESRFGYHIVRL-DRRV 258 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ + K ++Y+ L + A I Sbjct: 259 EGEELPFDYVADKIAGWLEASTWSKAVSQYIAILAAEAEI 298 >gi|218896099|ref|YP_002444510.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus G9842] gi|228899723|ref|ZP_04063971.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 4222] gi|228906786|ref|ZP_04070655.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 200] gi|228964109|ref|ZP_04125234.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar sotto str. T04001] gi|218541193|gb|ACK93587.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus G9842] gi|228795596|gb|EEM43078.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar sotto str. T04001] gi|228852790|gb|EEM97575.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 200] gi|228859905|gb|EEN04317.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 4222] Length = 289 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 93/304 (30%), Gaps = 42/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + ++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYDQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + + +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKDVDKKFD--------EMKKQYGDQFDTLMKQQGIKEETIK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q V+ K + E + K +I V++ Sbjct: 104 NSVRAQLAQEKAVEQSITDKDVKAKFEDYKKEIKASHILVKD------------------ 145 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 ++ K ++ + ++++ G + + +F+ +K Sbjct: 146 ---EETAKKVKDELAQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEEAAQKLK 202 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRSN 311 ++ + P TQ G I + D KA + K + + + + K Sbjct: 203 KDEVSEPVKTQFGYHIIKVTDNHADATFDKSKADIKKSLAQEKTQDAQFMNDLMMKEIKK 262 Query: 312 AIIH 315 A + Sbjct: 263 ADVK 266 >gi|315607433|ref|ZP_07882429.1| peptidyl-prolyl cis-trans isomerase [Prevotella buccae ATCC 33574] gi|315250865|gb|EFU30858.1| peptidyl-prolyl cis-trans isomerase [Prevotella buccae ATCC 33574] Length = 490 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 29/257 (11%), Positives = 71/257 (27%), Gaps = 15/257 (5%) Query: 47 NGEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 E I D+ + L + +G+ + +++ V+ L + I + V Sbjct: 72 GDEPILKSDVEVMRLQGLAEGITFSGDPDCSIPEQIAVQKLFLHQAAIDSIEVSESEVAQ 131 Query: 105 FFVQHAR---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 S E + + + ++ + Sbjct: 132 GIEGQINSWIQMTGSREKLEEYRKQSITQMRQQMHDDYRNRLLIQKMRMKLVEDVKVSPA 191 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 ++ A + M ++ + + +Q + + + R+ K Sbjct: 192 QVRAYFRDMPADSLPFVPTEVEVEILTSQPKISQEEINRVKDELRNYTDRVNKGETTFST 251 Query: 222 FASKIHDVSI-----GKAQYLLESDLHPQFQNLLKKSQN--NTTNPYVTQKGVEYIAICD 274 A + G+ Y L P F N+ + + ++ G I + D Sbjct: 252 LARLYSEDPGTARMGGELDYTGRGMLDPAFANVAFNLTDPKKISKIVESEFGYHIIQLID 311 Query: 275 KRDLGGEIALKAYLSAQ 291 KR G+ ++ + Sbjct: 312 KR---GDKIKVRHILRK 325 >gi|254699581|ref|ZP_05161409.1| Chaperone surA precursor [Brucella suis bv. 5 str. 513] gi|261750037|ref|ZP_05993746.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 5 str. 513] gi|261739790|gb|EEY27716.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 5 str. 513] Length = 311 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 30/280 (10%), Positives = 79/280 (28%), Gaps = 40/280 (14%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG I + DI + L A + E L ++ Sbjct: 51 AVSVNGVTIDEADILTEAQNHPAENPGAALLSAARALAVRELLLQRAR------------ 98 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 ++ + D + + ++ V++ + + E Sbjct: 99 ------------------EIGIEPEHEKDAEGRAEIDEDALVRMVIEREVDV-PSASRDE 139 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220 + ++ ++ I + + R + + + Sbjct: 140 AQRYYENNRHRFTSAPILEASHILIAADPADQETRDAARQTATRLAAAVIAEPATFASVA 199 Query: 221 -KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN--PYVTQKGVEYIAICDKR- 276 +++S G L P+F+ L++ T P ++ G + + D+R Sbjct: 200 LEYSSCPSGAQGGNLGQLTRGSTVPEFERALERMTPGETTANPIESRFGYHIVRL-DRRV 258 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ + K ++Y+ L + A I Sbjct: 259 EGEELPFDYVADKIAGWLEASTWSKAVSQYIAILAAEAEI 298 >gi|257460463|ref|ZP_05625564.1| foldase protein PrsA [Campylobacter gracilis RM3268] gi|257441794|gb|EEV16936.1| foldase protein PrsA [Campylobacter gracilis RM3268] Length = 269 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 36/299 (12%), Positives = 84/299 (28%), Gaps = 41/299 (13%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKINGELEKIAVQELI 81 + + ++++ + T+NG+ +T+ +++ + I + + +N E +K + + I Sbjct: 4 VLFTALSLAAAISLNATVYATVNGKDVTEKELAPLLQGIGNVDIAALNAEQKKELIDKGI 63 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 L E +KSG + + Sbjct: 64 DLMLLTDEAKKSG-------------------------------VMDEDVYKKELEIVKD 92 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 ++ V + K + EI K K I+ + N Q + Sbjct: 93 NLALRVWQAKEASKINIDDKEIADFYNKNKARFTEPARIKAAQIVVKTEAEANDIIKQLK 152 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQNNTT-N 259 + + + G+ ++ + P + K T Sbjct: 153 GLSDSALFTKF---AELAKAKSIDPQAKQTSGELGWMPSDQVKPFADAISKIKDGQITTK 209 Query: 260 PYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ G + + + + K ++ K K + L NA I Y Sbjct: 210 AIRSRVGYHVVLKEESQAKKQLSQSEAKPFIERVLRQQKAAKVVEQKAADLHKNAKIEY 268 >gi|168702269|ref|ZP_02734546.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gemmata obscuriglobus UQM 2246] Length = 420 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 85/308 (27%), Gaps = 32/308 (10%) Query: 41 RIRTTIN-GEVITDGDI----SKRIALLKLQ------KINGELEKIAVQELIVETLKKQE 89 +I + VITD ++ ++ L E+ +++ I L E Sbjct: 112 KIVARVGENNVITDQEVVEGVYQQFRELAALDGHARSAKQKEMYNQVLRKTIERELILDE 171 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLS-------------AEDFSSFLDKQGIGDNHFKQ 136 + + + + A + E+F++ L QG+ ++ Sbjct: 172 MYTKLKKANKMAIIDEVKELATQSIDRQLRMFRKDTGAKSEEEFAAILRTQGLTVPVIRR 231 Query: 137 YLAIQSIWPDVVKNDFMLKYGNL-EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + V + K E+ A + + R + I N Sbjct: 232 QMERQFMAEQYVSSVLKEKSRRTGLAEVRAYYDQHPDEFRRPDRVVWQHLFIAVRNYPNA 291 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ---YLLESDLHPQFQNLLKK 252 + + K+ G E + Sbjct: 292 QAAYNQAAALAQQANSGADLAELSMKYDEGFAKQQKG-LGAGEKRNEIQPADLEATVWSL 350 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + T G + + ++ G + AL++ + + T ++E + V +L Sbjct: 351 QPGQVSGILQTPTGYHLVKVVERDMAGVQPFDAALQSKIRDKLTRAQMESEYQKLVDELW 410 Query: 310 SNAIIHYY 317 ++ + Sbjct: 411 RKGVVRVF 418 >gi|229587026|ref|YP_002845527.1| hypothetical protein RAF_ORF0929 [Rickettsia africae ESF-5] gi|228022076|gb|ACP53784.1| Unknown [Rickettsia africae ESF-5] Length = 295 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 90/303 (29%), Gaps = 23/303 (7%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELE 73 L++ V + A I ++N E IT + R ++ + +L Sbjct: 4 LLLIITVFFTFNVAQASLPNIVASVNDEPITLNEFRARKKMIMALNNVESLTPAQDKQLS 63 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +A++ LI E+L Q + + +L + + + Sbjct: 64 DLALKSLIDESLLFQYAGDRE--IPQEEIENAIKSIEDRNKMPHGALLQYLKSRSVNPDS 121 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 F + + I +++ + EI V + + Sbjct: 122 FISQIKSELIKMNILSS-LSRSVQVSNKEIDVAILSSDQKDVEISMQVFTSKDGGNKAFT 180 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 ++ R+K + + L + ++ K+ + + + + Sbjct: 181 QMNNLKNRLKKCADVKKSLYDNFATMQIITDKLSKIEG------------VKQTIVKDLT 228 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + +N + E +C K+ L Y+ T KI + + + +R A+ Sbjct: 229 PDKASNVFEVNNKFEITLVCSKKILNVNEDENNYVVNFLTNKKISQKAQKMFENMRKKAV 288 Query: 314 IHY 316 I Sbjct: 289 IKI 291 >gi|30020404|ref|NP_832035.1| peptidylprolyl isomerase [Bacillus cereus ATCC 14579] gi|46396824|sp|Q81DT1|PRSA3_BACCR RecName: Full=Foldase protein prsA 3; Flags: Precursor gi|29895955|gb|AAP09236.1| Protein export protein prsA precursor [Bacillus cereus ATCC 14579] Length = 283 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 88/309 (28%), Gaps = 50/309 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 + + +++ + S + T + +T+ ++SK L+ Q L Sbjct: 1 MKKKKIFIGTIISCVMLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQQYGESTLY 55 Query: 74 KIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + + L+ + E K + + + F GL ED Sbjct: 56 QMMLSKALLDKYKVSDEEAKKKVEEAKDKMGENFKSTLEQLGLKNED------------- 102 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K+ + + + +K K + + Sbjct: 103 ELKEKMKPEIAFEKAIKATVTDKDVKNNYKPEMKVSHILVKD------------------ 144 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ +E +++ G+ +F+ Sbjct: 145 ------EKTAKEIKEKVNNGEDFAALANQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAY 198 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306 K ++P T G I + DK++L +K + +++ ++ V Sbjct: 199 KLDAGQVSDPVKTTYGYHIIKVTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVN 258 Query: 307 KLRSNAIIH 315 L +A I Sbjct: 259 DLLKDADIK 267 >gi|228950070|ref|ZP_04112255.1| hypothetical protein bthur0007_61420 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228809597|gb|EEM56033.1| hypothetical protein bthur0007_61420 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 299 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 95/311 (30%), Gaps = 37/311 (11%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + +K L + + + S + I+ ++ R+ Sbjct: 1 MKSSVKQLIMTGLAVGSLTFVSGCSLFDSDSVEYAAKTDSGTISKDELYNRMV------- 53 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 ++ + + ++I T+ +++ + S D L +E +SF D Sbjct: 54 -DKIGQRTLDDMITLTVLQKKYKVSDGEIDDEIKR-----------LKSEFGNSFNDFLS 101 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + ++ L + + + + ++ A ++ IR + Sbjct: 102 QNGVNNEEQLKDVIKLDKLKQKLALEHLKIQDKDLKALY------EQKKPEIRVSHILVS 155 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQ 247 D L + + ++F+ G Y E D+ FQ Sbjct: 156 DETLAKDIKSK---------IDSGEDFGSLAKEFSQDIATKEKGGDIGYFKEGDMVQAFQ 206 Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK-HEAEYV 305 + +K + P T G I + D++ L +K L ++ K+++ + Sbjct: 207 DAARKLKVGEVSQPVKTDFGYHVIKLLDEKKLLSFEQMKPQLESELISNKMDQNKINAEI 266 Query: 306 KKLRSNAIIHY 316 +KL I Sbjct: 267 QKLLDKDNIKI 277 >gi|229109756|ref|ZP_04239342.1| Foldase protein prsA 1 [Bacillus cereus Rock1-15] gi|229144911|ref|ZP_04273308.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST24] gi|229150538|ref|ZP_04278754.1| Foldase protein prsA 1 [Bacillus cereus m1550] gi|228633031|gb|EEK89644.1| Foldase protein prsA 1 [Bacillus cereus m1550] gi|228638633|gb|EEK95066.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST24] gi|228673797|gb|EEL29055.1| Foldase protein prsA 1 [Bacillus cereus Rock1-15] Length = 293 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 89/309 (28%), Gaps = 50/309 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 L + +++ + S + T + +T+ ++SK L+ Q L Sbjct: 11 LKKKKIFIGTIISCVMLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQQYGESTLY 65 Query: 74 KIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + + L+ + E K + + + F GL ED Sbjct: 66 QMMLSKALLDKYKVSDEEAKKKVEEAKDKMGENFKSTLEQLGLKNED------------- 112 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K+ + + + +K K + + Sbjct: 113 ELKEKMKPEIAFEKAIKATVTDKDVKNNYKPEMKVSHILVKD------------------ 154 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ +E ++++ G+ +F+ Sbjct: 155 ------EKTAKEIKEKVNNGEDFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAY 208 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306 K ++P T G I + DK++L +K + +++ ++ V Sbjct: 209 KLDAGQVSDPVKTTYGYHIIKVTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVN 268 Query: 307 KLRSNAIIH 315 L +A I Sbjct: 269 DLLKDADIK 277 >gi|157374684|ref|YP_001473284.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sediminis HAW-EB3] gi|157317058|gb|ABV36156.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sediminis HAW-EB3] Length = 621 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 22/258 (8%), Positives = 56/258 (21%), Gaps = 7/258 (2%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV- 107 + I + + + + V L+ T + + Sbjct: 139 QAILR-QLGYQANSFRDMMRTDMTRRQLVASLVGSEFVLPGEANYLADIQGQTRDIRYHW 197 Query: 108 -QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 A + F + + ++ D + E Sbjct: 198 VDAAPFIAEAVVTDEQAKSYYDANLAQFMSPETLSLEYIELNAKDMAAGVTVSDEEAKTY 257 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + K ++ + + K + + + Sbjct: 258 YDENKQQYLKAEKRLAAHILVSLGDDDSTA-KAKANAIYAKLQAGEEFSELAKAESEDTF 316 Query: 227 HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIA 283 G+ + + P F + L S+ + T G I + D + Sbjct: 317 SGEQGGQLDWFEPGVMEPAFDEVLYSLSKGEYSAVVKTSFGYHIIKLLDVQPAAEAAFED 376 Query: 284 LKAYLSAQNTPTKIEKHE 301 +K+ + AQ + Sbjct: 377 VKSKILAQLKEKQAVDQY 394 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 24/238 (10%), Positives = 64/238 (26%), Gaps = 19/238 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ I V++ F + SY + + T+NGE I++ + + Sbjct: 1 MLEKIREGSQGVIAKSILVLVILSFAFTGVSSYLGSSTEAA-AATVNGEEISESALEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +++ ++ L+ E L Q G+ + Sbjct: 60 QNERARLEQQLGEMFAALSADERYLSSVKQSVLERLVAEKLLDQTATDLGLRVSDAQIKN 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + D + + + D+ + + E +P Sbjct: 120 AIMTEPAFQTDGVFDNDRYQAILRQLGYQANSF--RDMMRTDMTRRQLVASLVGSEFVLP 177 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + +I + IR + ++ + + + ++ Sbjct: 178 GEANYLADIQGQTRDIRYHWVDAAPFIAEAVVTDEQAKSYYDANLAQFMSPETLSLEY 235 >gi|163856532|ref|YP_001630830.1| peptidyl-prolyl cis-trans isomerase D [Bordetella petrii DSM 12804] gi|163260260|emb|CAP42562.1| peptidyl-prolyl cis-trans isomerase D [Bordetella petrii] Length = 653 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 62/212 (29%), Gaps = 16/212 (7%) Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF--------MLKYGNLEMEIP 164 +A D+ + + + Q P+ V + E +I Sbjct: 193 RRFAAADYRAQVSVSPEDIQTWYDGNKQQLTVPEQVTAQYLVLDEAAATQGVQVKEEDIA 252 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA- 223 + ++ KN + R I ++ + AE + D + + A Sbjct: 253 SYYEQNKNRFGQPERRRASHIMIELPAGASEDARKAAHAKAEALAKQAAADPAQFAELAR 312 Query: 224 ----SKIHDVSIGKAQYLLESDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 G +L L P +++ +++ + + G+ + + + + Sbjct: 313 ANSQDAGSAGKGGDLGWLAPGMLAGPLEKSVFGLAKDQVSGVVESPSGLHIVKVTEIQPA 372 Query: 279 --GGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++ ++A+ +E KL Sbjct: 373 AIKPLAEVRDEITAEIRKQIAATRFSEMATKL 404 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 49/165 (29%), Gaps = 17/165 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR- 59 M + +++ + ++ F +V I Y+S+ T+ G+ IT + Sbjct: 1 MFELLRNH-RRWMQFILLILIVPSFFLVGIQGYESFIRREPELATVAGQPITRSEFDMAH 59 Query: 60 ------------IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS---NTVNY 104 + + + +LI + L Q + + Sbjct: 60 RNQLEQFRQRLGSQFDPALVDTPAMREQLLNQLIDQRLLAQVAIDNRFSVSDGTLRNTIA 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 Q N S E + L QG+ F+ L V++ Sbjct: 120 AIPQVQDNGRFSPERYRQVLAAQGMTPTSFEAGLRRDLAVGRVLE 164 >gi|104781902|ref|YP_608400.1| peptidylprolyl isomerase [Pseudomonas entomophila L48] gi|95110889|emb|CAK15605.1| putative Peptidylprolyl isomerase [Pseudomonas entomophila L48] Length = 318 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 18/240 (7%), Positives = 60/240 (25%), Gaps = 9/240 (3%) Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA--- 139 E R + + + + Sbjct: 63 ELKALFAQLPEEARVSLRGDRPALEAWIRARLAEKALYQQAEAQGWLQRPDIQAQTRAAT 122 Query: 140 IQSIWPDVVKN--DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 Q + D +++ Y + A + + + + +F +N ++ Sbjct: 123 EQIVLRDYLESVSKVPDDYPSDAELKQAYEAGKAGLQLPARYRLSQIFLRVENPKDDEAV 182 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL-HPQFQNLLKKSQN 255 ++ A++++ + + + G + L + + Sbjct: 183 RKQAQALAKQAQASDADFAALAREHSQDAGTAANGGDTGLQALAQLLPEVRGVVSRLKAG 242 Query: 256 NTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + P + G + + +++ + L + E+ YV+ + +A Sbjct: 243 TVSEPVQSAAGYHIVKLVEQQPARAATFDEVAPRLRQLLRAQRQEQVAKAYVEGMFDSAT 302 >gi|313204245|ref|YP_004042902.1| ppic-type peptidyL-prolyl cis-trans isomerase [Paludibacter propionicigenes WB4] gi|312443561|gb|ADQ79917.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paludibacter propionicigenes WB4] Length = 451 Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 20/256 (7%), Positives = 73/256 (28%), Gaps = 12/256 (4%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEI 90 + + I E I ++ ++ ++ G+ + +++ ++ L + Sbjct: 20 MAQKNVVDEVIWIIGDEAILKSEVEEQRLRAQIDNTPIDGDPYCVIPEQIAIQKLFLHQA 79 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV-- 148 +T + ++V + + + ++ L + ++ Sbjct: 80 VLDSVTVNESSVINQVEKQLNYYESQIGSKEKVEEYFKMSTKELREQLREITRNQQIIQD 139 Query: 149 -KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + + ++ + + ++ L + + + + + Sbjct: 140 MQRKLVGDIKSTPSDVRRFMKDLPADSIPTVPAEVELQIVSFEPPVPVTEINRIKERLRD 199 Query: 208 SRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQFQNLLKK--SQNNTTNP 260 R+ + A G+ ++ L P+F + + Sbjct: 200 FTERVNSGSSDFSVLARLYSEDSESAKRGGELGFMGRGQLVPEFSAVAFNLLDPKKVSRI 259 Query: 261 YVTQKGVEYIAICDKR 276 T+ G I + +KR Sbjct: 260 VQTEFGFHIIQLIEKR 275 >gi|237753051|ref|ZP_04583531.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gi|229375318|gb|EEO25409.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 284 Score = 73.9 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 93/299 (31%), Gaps = 28/299 (9%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79 ++ + + ++ S I +NG+ +T ++ K Q+ + +AV Sbjct: 8 VLITSIILSVSAVSAAPSLVSGIAFFVNGDPVTLVEL------YKTQQREKVSQDVAVDR 61 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 LI E L ++EI+K ++ + + + A+ + E +++ G N +K+ + Sbjct: 62 LINERLHEEEIKKRKLSVNDLEIEDEIRRVAKQNKTTLEKVRKYVEGNGGNWNTYKEDIK 121 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + ++ ++ + V+ + + VQ Sbjct: 122 KEILKRKLYQSITQESLKMVDNKEILEYYNANQREFLIPQSIDVVKFYSKDSTAIEHVVQ 181 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 R K + + + + + T+ Sbjct: 182 SRGKSVAPNVKSENEVLQTAALN--------------------PQIVLSFAQGNVGGFTS 221 Query: 260 PYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + I K + + K + K EY +KLRSNA ++ Sbjct: 222 IFPIGDDYVTFLIKGKHNPVLLPYESAKNIALQKIMQRKENYVIYEYFEKLRSNAKVNI 280 >gi|192360723|ref|YP_001982468.1| putative peptidyl-prolyl cis-trans isomerase D [Cellvibrio japonicus Ueda107] gi|190686888|gb|ACE84566.1| putative peptidyl-prolyl cis-trans isomerase D [Cellvibrio japonicus Ueda107] Length = 621 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 35/241 (14%), Positives = 73/241 (30%), Gaps = 18/241 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + I + F+++IF + + S +W ++ +NGE IT ++ I Sbjct: 1 MLQSIRDNSKGVISYILIGFLVVIFALFGVESLFNWNPTANKVVEVNGEKITQVELQNAI 60 Query: 61 ALLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 A K Q +N L K + LI + Q +K+G+T ++ + Sbjct: 61 ARQKQQMMNRYGDQVPSEFLSEDYLRKPVLDNLIQNQVLYQAAKKAGMTVGNDLITEQIS 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM-----LKYGNLEME 162 + ++ + + Q V+ + E+E Sbjct: 121 SAPVFKNEAGVFDNTRYRQALSMMGYTHATYTQQLAKDLVLNQLYTGLASSSFTTPNEIE 180 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 L + + + + A S ++ D +L Sbjct: 181 QLIALSYQTRDFSYFVLPSSKIKESVVVSDEEIADYYAKNPQAYTSEEQVAVDYIELSVD 240 Query: 223 A 223 A Sbjct: 241 A 241 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 48/173 (27%), Gaps = 4/173 (2%) Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 V + L L +I +++++ + + + ++IK Sbjct: 228 EQVAVDYIELSVDALMADISISEEQLHKQYEQGLASFVAAPERHAAHILVENQDAEKIKA 287 Query: 205 AEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYV 262 E + ++ + G + +F+ + P Sbjct: 288 VREKLAAGEDFAELAKTYSDDLGSKEQGGDLGFTKGDTFPAEFETALAGLKVGEVSAPVE 347 Query: 263 TQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 T G +I + +R KA L + E +++L+ A Sbjct: 348 TDAGTHFIKLLAERGSQAPSFEEQKASLEEHLKRAEAENIFVAKLEQLKELAF 400 >gi|325971259|ref|YP_004247450.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta sp. Buddy] gi|324026497|gb|ADY13256.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta sp. Buddy] Length = 348 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 39/345 (11%), Positives = 101/345 (29%), Gaps = 42/345 (12%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K L++ + + A ++ +R T I+ ++ +A + Sbjct: 1 MKRRAIVITLMLLVGFQLAAATIGAPAATVRLT-KTTPISMAELDAEVAEYQASAKAAGQ 59 Query: 73 EK------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG------LSAEDF 120 + + LI L +Q + G+ + ++ + N +S E F Sbjct: 60 DPATIDPLQVLNLLINNELFRQGAARDGVKITDSMIDSAYASQKANLEASYNQVISDEQF 119 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKND----FMLKYGNLEMEIPANKQKMKNITVR 176 + + +++ + Q + ++ E EI + +K K V Sbjct: 120 AEVITNNFGSVEAYRKMVGEQLMVDSYIRLKKADTLNTPVSITEAEISSFYRKNKTQFVS 179 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK--DCNKLEKFASKI-HDVSIGK 233 ++ IP Q K + ++++ + ++ G Sbjct: 180 PETVKLSHIYIPLTDDQTANAKNKATLEDVAAKIKAGTLTFEKAVVDYSQDPQSKSKAGD 239 Query: 234 AQYLLESDLHP-------QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG------- 279 +L + F T++ + G + I + Sbjct: 240 IGWLTMDNADALSGLGDAFFDVAFTTEVGTTSSVVTSLTGYHILKILAYNETKILGLDEA 299 Query: 280 ----GEIALKAYLSAQNTPTKIEK----HEAEYVKKLRSNAIIHY 316 ++ Y+ + + K ++ V +LR +A ++ Sbjct: 300 ISPNTTSTIRDYIKNELSSAKQQETYYKAINSLVDELRKSATVNI 344 >gi|320354707|ref|YP_004196046.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfobulbus propionicus DSM 2032] gi|320123209|gb|ADW18755.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfobulbus propionicus DSM 2032] Length = 626 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 15/170 (8%), Positives = 48/170 (28%), Gaps = 9/170 (5%) Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLF-SIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + ++ + T + R +LF + + + + + Sbjct: 246 VNDEAVQRYYQEHAELYATPEQRRARHILFKIADGDTAETKAAKKAAAEKVLAQIRGGGD 305 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC 273 ++F+ G + + F+ + + T G + + Sbjct: 306 FALLAKQFSEDTSKEKGGDLGFFSRGQMVEPFERSVFSLRTGEISGVVETPYGYHLVKLE 365 Query: 274 DKRDLG--GEIALKAYLSAQNTPT-----KIEKHEAEYVKKLRSNAIIHY 316 + + ++A + A+ +K Y + +R+ ++ Y Sbjct: 366 EIKPATTRSLEEVRASIRAELERQGVKAITFKKASTAYEEIIRAGSLTKY 415 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 23/82 (28%), Gaps = 5/82 (6%) Query: 238 LESDLHPQFQNLLKKSQNNTTNP---YVTQKGVEYIAICDKR--DLGGEIALKAYLSAQN 292 + + + + P V I + R + A + L Q Sbjct: 537 PANGVPEEIRRDAFARLGQGAFPDKVIVEGNTCYLYQILESRRGQGDTDAAKRQALEQQL 596 Query: 293 TPTKIEKHEAEYVKKLRSNAII 314 A+++ +LR A I Sbjct: 597 LAAHKNTLMADWIDQLRKEAKI 618 >gi|78066690|ref|YP_369459.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. 383] gi|77967435|gb|ABB08815.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. 383] Length = 644 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 24/273 (8%), Positives = 59/273 (21%), Gaps = 22/273 (8%) Query: 53 DGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 D+ + LL Q + ++ L ++ + + + R Sbjct: 133 SIDVERYAQLLSFQGMTPEQYQERVRYSLSLQQIPASIVSSAFTPKSLAQRLSELAAQQR 192 Query: 112 NTGLSAEDFSSFLDKQGIGDNH---FKQYLAIQSIWPDVVKNDF--------MLKYGNLE 160 S F K D + P+ + + Sbjct: 193 EVQALVLKTSDFAAKVQPTDAQLAAYYDAHKQSFATPETATIQYLVYSPAAAAASAQPTD 252 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +I E +R I + AE+ + ++ Sbjct: 253 ADIKKFYDDNPTHFRTEAQVRVSHIFIAAPGSASAADKTAAKTKAEQLLADVKAHPDQFA 312 Query: 221 KFA-----SKIHDVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 + A G ++ Q + + + G + Sbjct: 313 QVAQKSSQDAPSAAKGGDLGFITRGSTAGGKAFDDAAFALKQGDVSGVVQSDLGFHILKA 372 Query: 273 CDKRDL--GGEIALKAYLSAQNTPTKIEKHEAE 303 + + +K ++A+ K + Sbjct: 373 TEVKPAAVKPFADVKDQIAAELKQQYASKAFTD 405 Score = 45.1 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 20/211 (9%), Positives = 54/211 (25%), Gaps = 15/211 (7%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------GELE 73 V I ++ + S +NG IT + Q E Sbjct: 26 FVGIQGFRGFFDDSANVAAVNGHKITRVEFDGAFRQQIDQARQALGGQFDIKMFDTPEHR 85 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--QHARNTGLSAEDFSSFLDKQGIGD 131 K + LI + + E ++ +T N V + + Q + Sbjct: 86 KQVLDGLIQQRVLADETQRLHLTASDNAVRDALMSDPMIASLKKPDGSIDVERYAQLLSF 145 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + + + Q++ + ++ ++ ++ D Sbjct: 146 QGMTPEQYQERVRYSLSLQQIPASIVSSAFTPKSLAQRLSELAAQQREVQALVLKTSDFA 205 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q + + + ++ Sbjct: 206 AKVQPTDAQLAAYYDAHKQSFATPETATIQY 236 >gi|21241842|ref|NP_641424.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas axonopodis pv. citri str. 306] gi|21107222|gb|AAM35960.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas axonopodis pv. citri str. 306] Length = 656 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 15/147 (10%), Positives = 44/147 (29%), Gaps = 4/147 (2%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 +K + + + L +L S + + K K A E++ + Sbjct: 274 KRYEDEKARFVEPEQRLASHILISAGTDAAAQKAAEAKAAKLAAEAKQTGTDFAALAKAN 333 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + + G ++ + + F++ P ++ G I + + + G Sbjct: 334 SQDPGSKDAGGDLGWVEKGTMVKPFEDALFSMKAGEVVGPIKSEFGYHVIQLREVKGGQG 393 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + Q +++ + Sbjct: 394 KS--FEQVRDQLAAEQLKADADKAFAD 418 Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 23/192 (11%), Positives = 47/192 (24%), Gaps = 34/192 (17%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-------------- 46 M K+ S +I ++I F V SY ++ + Sbjct: 1 MLQKLRDKTSGWIATAILGLLMIPFLFVIDNSYLGGIGANN-VAKVQAPPAWWKSAPSWW 59 Query: 47 ------NGEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++Q+ + EK + +L+ E + + Sbjct: 60 PVSLLWQHHEISTQDFRTRFEQARMQERQRQGEKFDPRSFESRENKLQVLDQLVDEQVVR 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E +GI TV + + G + + Sbjct: 120 LGAEDAGIVIGDATVRDYIANIPAFQVDGKFSPDQYRAALAQGTPPRTPAQFDALVRDSL 179 Query: 148 VKNDFMLKYGNL 159 ++ Sbjct: 180 QQSVIPQAVAES 191 >gi|319944662|ref|ZP_08018929.1| peptidyl-prolyl cis-trans isomerase [Lautropia mirabilis ATCC 51599] gi|319742101|gb|EFV94521.1| peptidyl-prolyl cis-trans isomerase [Lautropia mirabilis ATCC 51599] Length = 248 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 27/276 (9%), Positives = 71/276 (25%), Gaps = 47/276 (17%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 +NG ITD +++ + + IA+ + Sbjct: 3 IKVNGVEITDDEVAAELPFHQDTPQPLRSACIAL-----------------------ALK 39 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + A G D D ++ + + Sbjct: 40 RVMLDEAAEQGHPVADAEEAADY--------------------LLSTQVTVPVVDEASCR 79 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 +Q + V ++ + + + + + + + + Sbjct: 80 RHYEQYPERFRVGGWVDADHILFAVNERTPLDALRLVAKETLALLQEHPERFEAMAAERS 139 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN--PYVTQKGVEYIAICDKRDLG-- 279 + + G + + P+F+ L + T T+ G+ I + + + Sbjct: 140 NCPSAENGGALGRMQRGETVPEFEAALWRIAPGTIADSLIETRYGLHIIRVNRRHEGQQL 199 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++ ++ T + +YV+ L A I Sbjct: 200 PFEQVQEGIAQALTAASRDAAWRQYVQVLLGRAKIE 235 >gi|157964821|ref|YP_001499645.1| hypothetical protein RMA_1057 [Rickettsia massiliae MTU5] gi|157844597|gb|ABV85098.1| hypothetical protein RMA_1057 [Rickettsia massiliae MTU5] Length = 303 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 89/303 (29%), Gaps = 23/303 (7%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELE 73 L++ V + A I ++N E IT + R ++ + +L Sbjct: 12 LLLIITVFFTFNVAQASLPNIVASVNDEPITLNEFRARKKMIMALNNVESLTPAQDKQLS 71 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +A++ LI E+L Q ++ + +L + + + Sbjct: 72 DLALKSLIDESLLFQYAGDRE--IPQEEIDNAIKSIEDRNKMPHGSLLQYLKSRSVNPDS 129 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 F + + I +++ + EI V + + Sbjct: 130 FISQIKSELIKMNIL-SILSRSVQVSNKEIDVAILSSDQKDVEISMQVFTSKDGSNKAFT 188 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 ++ R+K + + + ++ K+ + + + + Sbjct: 189 QMNNLKNRLKKCADVKKSFYDNFATMQIITDKLSKIEG------------VKQTIVKDLT 236 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + +N + E +C K+ L Y+ T KI + + + +R A Sbjct: 237 PDKASNVFEVNNKFEITLVCSKKILNVNEDENNYVVNFLTNKKISQKAQKMFENMRKKAA 296 Query: 314 IHY 316 I Sbjct: 297 IKI 299 >gi|295132738|ref|YP_003583414.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zunongwangia profunda SM-A87] gi|294980753|gb|ADF51218.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zunongwangia profunda SM-A87] Length = 467 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 37/290 (12%), Positives = 84/290 (28%), Gaps = 15/290 (5%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGITF 97 I I +I D DI ++ Q + + L+ L + + I Sbjct: 47 DGIAAVIGDYIILDSDIDLTRKDIQSQGNSTANVTDCQLAGSLMENKLYAHQAIQDSIIV 106 Query: 98 DSNTVNYFFVQHAR----NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 +N + Q G + + + L QS ++ + Sbjct: 107 PDAQINNYIDQQIAGMVRQLGSIEDVLEFYKRDSEAEFRNELFDLNKQSQLAQKMRQKII 166 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 E+ A ++ ++ + + I + QK I + R + Sbjct: 167 ENIEVTPEEVRAYFNEIPKDSLPVFGDEVEISEIVVKPEVPEEEKQKTIDRLNQFREDVL 226 Query: 214 KDCNKLEKFASKIHD--VSIGKAQ--YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 ++ +K A D + G ++ + + + P+ T G Sbjct: 227 ENGSKFATKAILYSDDTQTGGNILSLGRKDAFVKEFKDVAFSLREGEISEPFETTYGYHI 286 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI---IHY 316 I + R EI ++ L + + + + ++R + I + Sbjct: 287 IQLVKVRGQ--EIDVRHILLIPDVNNAAVEKAKKEIDQVREKIVNGEIEF 334 >gi|229010444|ref|ZP_04167648.1| Foldase protein prsA 1 [Bacillus mycoides DSM 2048] gi|228750864|gb|EEM00686.1| Foldase protein prsA 1 [Bacillus mycoides DSM 2048] Length = 289 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 92/304 (30%), Gaps = 42/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + ++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYNQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + + +QG+ + K Sbjct: 52 VLNNMVMEKVLIKNYKVDEKEVDKKFD--------EMKKQVGDQFDTLMKQQGLKEETVK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + ++ K + E + K +I V++ Sbjct: 104 NGVRASLAQEQAIEKAITDKDLKAKFEDYKQEIKASHILVKD------------------ 145 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKS 253 ++ K +E + +K++ G + + +F + K Sbjct: 146 ---EETAKKVKEELAQGKSFEELAKKYSEDPGSKEKGGDLGFFGPDKMVKEFDEAARKLK 202 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRSN 311 ++ + P TQ G I + + KA + + K + + + + K Sbjct: 203 KDEVSEPVKTQHGYHIIKVTETHADATFDKAKADIKKEVVQEKTQDAQFMNDLMMKEIKK 262 Query: 312 AIIH 315 A + Sbjct: 263 ADVK 266 >gi|302345884|ref|YP_003814237.1| PPIC-type PPIASE domain protein [Prevotella melaninogenica ATCC 25845] gi|302149581|gb|ADK95843.1| PPIC-type PPIASE domain protein [Prevotella melaninogenica ATCC 25845] Length = 474 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 22/292 (7%), Positives = 78/292 (26%), Gaps = 34/292 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 +I + + + ++ + TING+ ++ + G ++K +V E + Sbjct: 5 VILSALLLSTTMAYGQTDPTIMTINGQPVSRSEFEYSYN---KNNAEGVIDKKSVDEYVD 61 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + ++ + +T++ F + + Q Sbjct: 62 LFINYKLKVQAALDAHLDTLSSFKKEFLSYRNQQVRPTFITDADVEAEGRKLYREAQQQV 121 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + ++ + + ++ Sbjct: 122 ----------------------------EANGGMWNCAHILIGLYQNADKEAAEAAKQLA 153 Query: 203 KDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNP 260 + +K+++ ++ G+ +L + P+F+ + P Sbjct: 154 DSLYNALRGGADFAELAKKYSTDVNSAMNGGQLLHLQKGQTVPEFEKALFALKPGEISAP 213 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSN 311 ++ G I + + L+ + E+ + + + + Sbjct: 214 VLSPFGYHIIKMGGRESFPTYETLRPEIMQYIEMQGLREQIIDQKLDSIVES 265 >gi|152974625|ref|YP_001374142.1| peptidylprolyl isomerase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023377|gb|ABS21147.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus cytotoxicus NVH 391-98] Length = 282 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 92/300 (30%), Gaps = 44/300 (14%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 ++ +++ + S +I T+ G+ +T ++ + + K ++ + Sbjct: 4 AMLALAATSVIALSACGSSDKIATSKAGD-VTKDELYASLK--------QQGGKQVLRNM 54 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 IVE K I ++ + F + L +QGI + K + Sbjct: 55 IVE--------KVFIKNYKVDDKDVDKKYDEFKKQYGDQFDTLLKQQGIKEETLKTSVRA 106 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q ++ + ++Y + V K + K Sbjct: 107 QLAQEKAIEKSITDE-----------------EAKKKYRDKRVFAKHILVKDEETAKKVK 149 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT 258 E + + ++++ G L L +F++ K ++ + Sbjct: 150 ------EELGQGKSFEDLAKQYSEDPGSKEKGGDLGELKPGTLVKEFEDAAFKMKKDEVS 203 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRSNAIIHY 316 P + G I + D +D KA + + K++ + E+ K A + Sbjct: 204 EPVKSSFGYHIIKVTDIKDAKPFKEEKAAIKKEIAQQKLQDPQFLNEFQNKEVKKADVKI 263 >gi|228944771|ref|ZP_04107134.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814799|gb|EEM61057.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 287 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 89/305 (29%), Gaps = 46/305 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + +++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKDEFYEQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKEVDKKYD--------EMKKQYGDQFDTLLKQQGIKEETLK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q ++ K + + Sbjct: 104 TGVRAQLAQEKAIEKTITDKELKDNYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G + + +F++ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGAGKMVKEFEDAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 ++ + P +Q G I + D ++ KA + + K + + + + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEVVAKKSQDGEFMNDLMMKEIK 259 Query: 311 NAIIH 315 A + Sbjct: 260 KADVK 264 >gi|229195349|ref|ZP_04322120.1| Foldase protein prsA 1 [Bacillus cereus m1293] gi|228588123|gb|EEK46170.1| Foldase protein prsA 1 [Bacillus cereus m1293] Length = 287 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 88/305 (28%), Gaps = 46/305 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + +++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYEQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKEVDKKFD--------EMKKQYGDQFDTLLKQQGIKEETLK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q ++ K + + Sbjct: 104 TGVRAQLAQEKAIEKTITDKELKDNYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G + + +F+ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEEAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 ++ + P +Q G I + D ++ KA + + K + + + + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKSQDGEFMNDLMMKEIK 259 Query: 311 NAIIH 315 A + Sbjct: 260 KADVK 264 >gi|157828877|ref|YP_001495119.1| hypothetical protein A1G_05640 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933604|ref|YP_001650393.1| hypothetical protein RrIowa_1217 [Rickettsia rickettsii str. Iowa] gi|157801358|gb|ABV76611.1| hypothetical protein A1G_05640 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908691|gb|ABY72987.1| hypothetical protein RrIowa_1217 [Rickettsia rickettsii str. Iowa] Length = 295 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 89/303 (29%), Gaps = 23/303 (7%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELE 73 L++ V + A I ++N E IT + R ++ + +L Sbjct: 4 LLLIITVFFTFNVAQASLPNIVASVNDEPITLNEFRARKKMIMALNNVASLTPAQDKQLS 63 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +A++ LI E+L Q + + +L + + + Sbjct: 64 DLALKSLIDESLLFQYAGDRE--IPQEEIENAIKSIEDRNKMPHGSLLQYLKSRSVNPDS 121 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 F + + I +++ + EI V + + Sbjct: 122 FISQIKSELIKMNILSS-LSRSVQVSNKEIDVAILSSDQKDVEISMQVFTSKDGGNKAFT 180 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 ++ R+K + + L + ++ K+ + + + + Sbjct: 181 QMNNLKNRLKKCADVKKSLYDNFATMQIITDKLSKIEG------------VKQTIVKDLT 228 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + +N + E +C K+ L Y+ T KI + + + +R A Sbjct: 229 PDKASNVFEVNNKFEITLVCSKKILNVNEDENNYVVNFLTNKKISQKAQKMFENMRKKAA 288 Query: 314 IHY 316 I Sbjct: 289 IKI 291 >gi|332141514|ref|YP_004427252.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Alteromonas macleodii str. 'Deep ecotype'] gi|327551536|gb|AEA98254.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Alteromonas macleodii str. 'Deep ecotype'] Length = 565 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 23/266 (8%), Positives = 60/266 (22%), Gaps = 11/266 (4%) Query: 54 GDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 ++ L+ Q +L E+E++ + + + Sbjct: 82 FQVADFRDYLRTQMTQNQLAAALTNS---SFALDGEVEQANALQRQTRNAKYVLVSSDEF 138 Query: 114 GLSAE-DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 S E + F ++ + + D + E + Sbjct: 139 ADSIEVTDADIEAFYNNNIASFDTEEQVKLAYVKLSVEDLKGRVSVDEDSVRTYYDNNLG 198 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSI 231 E R I + + E + + Sbjct: 199 SYGTEEQRRVSHILIEAGDDTDAAKAKAESLK--AEIDSGADFAALAEANSDDTFSAENG 256 Query: 232 GKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAY 287 G ++ + P F ++ + ++ T+ G I + + ++ + Sbjct: 257 GDLDFITPEMMDPAFDEAAFSLENVGDVSDVVETEFGYHIIKLTEVKEAQVKSFDEVAGE 316 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + E L A Sbjct: 317 IRDTLLYDAAMEKYFELQNTLAEIAF 342 >gi|197124849|ref|YP_002136800.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. K] gi|196174698|gb|ACG75671.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. K] Length = 354 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 94/314 (29%), Gaps = 33/314 (10%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA----LLKLQK 67 ++ + ++ + K S T NG IT G++ R+ ++ + Sbjct: 1 MLRRIVLLGLVALAATACQPGSKDSKKSGPAVATGNGFTITAGEMKARLDEQSPFIRARY 60 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 E +K + LI + +E E+ G+ D + + ++ + Sbjct: 61 STLERKKEFLDNLIRFEVLAREAERQGLANDPDVQLTLKKVMVQKLVQKNFQDANGAAAE 120 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + + ++Y E + + + + + Sbjct: 121 AMPEADLQKYY--------------------DEHKAEYYRPRRVRLAAVVWNAPAGSPER 160 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + + K + +++ L + N+ + A + G + DL + Sbjct: 161 AAKVALAKKALAKLKAEEKKNTLAFAQLVNEFSEDA--ASKATAGDLGFKSREDLEKAYS 218 Query: 248 NLL-----KKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKH 300 T+ T V + ++D +KA + + K K Sbjct: 219 KEFADVTFNLQPGATSGVLETANAVYLVKGTGEQDELNRTFEQVKAQIQTKLYREKKTKE 278 Query: 301 EAEYVKKLRSNAII 314 ++KKLR +A + Sbjct: 279 FDGWLKKLRDDAKV 292 >gi|229028826|ref|ZP_04184927.1| Foldase protein prsA 1 [Bacillus cereus AH1271] gi|228732397|gb|EEL83278.1| Foldase protein prsA 1 [Bacillus cereus AH1271] Length = 288 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 32/306 (10%), Positives = 89/306 (29%), Gaps = 46/306 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + L ++ + + + + S +I T+ G+ IT + +++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTGSSSDKIVTSKAGD-ITKEEFYEQMKT--------QAGK 51 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + +++E + + + D + F + L +QGI + Sbjct: 52 QVLNNMVMEKVLIKNYKVDDKEVDKKYD--------EMKKQYGDQFDTLLKQQGIKEETL 103 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 K + Q ++ K + + Sbjct: 104 KTGVRAQLAQEKAIEKTITDKELKDNYKPEIKASHILVKD-------------------- 143 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 + K +E + ++++ G + + +F++ K Sbjct: 144 ----EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFSSGKMVKEFEDAAYKL 199 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLR 309 ++ + P +Q G I + D ++ K + + K + + + + K Sbjct: 200 KKDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKDDIKKEIVQKKAQDGEFMNDLMMKEI 259 Query: 310 SNAIIH 315 A + Sbjct: 260 KKADVK 265 >gi|291482444|dbj|BAI83519.1| hypothetical protein BSNT_00126 [Bacillus subtilis subsp. natto BEST195] Length = 297 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 95/319 (29%), Gaps = 36/319 (11%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIV-SYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 S + + +L V I + S + S TI G+ +T + K + Sbjct: 1 MKSRTIWTIILGALLVCCIAVAYTLTKSQTGASSSGESIATIGGKSVTREEWLKEM---- 56 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + K ++++I + +Q +K+ + + V+ F+ ED Sbjct: 57 ----EDQYGKSTLEDMINVRVVEQLAKKNNLKISKSEVDREFLLIKAVNNSFYEDE---- 108 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + ++ Q + +++ E+ + K K + + R Sbjct: 109 -------HTTEKEWKDQIRYNILLEELLTRDIDISNKELESFYNKNKELYQFDDSYRIRH 161 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-- 242 + D + + + + + E+ + G ++ E+ Sbjct: 162 IVVKDEEEAREVLKE--------LKGGSSFEAVAAERSTDRYTSPYGGDLGFVTEASDNI 213 Query: 243 -HPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIE 298 + ++ + P G I + +K +K + Q ++ Sbjct: 214 PSAYIEEAKTLKEDEWSQEPIKVNNGYAIIQLKEKLKARTFSFDEVKDQIRRQIAMDQLG 273 Query: 299 KHEAEYVKKLRSNAIIHYY 317 VK L A + ++ Sbjct: 274 DKAT--VKTLWKEADVSWF 290 >gi|94984847|ref|YP_604211.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus geothermalis DSM 11300] gi|94555128|gb|ABF45042.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus geothermalis DSM 11300] Length = 345 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 20/290 (6%), Positives = 66/290 (22%), Gaps = 28/290 (9%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGE--------------LEKIAVQELIVETL 85 + + E T D + + +N + + + + Sbjct: 56 QTVVAQVGNETYTLADFDRAFRQAVARVLNAQGVPYTPDLLAEFAEARPDFLTQFARDRA 115 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 Q ++ ++ + + A+ + + F+ L Q++ Sbjct: 116 VYQLARRTT-QVKPADIDAQVAEARKGFSSDADFQQALQASGYENEAEFRADLERQAVVQ 174 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + + + + + + + R Q + Sbjct: 175 AYLDS-IKSRLTFGDALVQSFYNLNRAAFNRPAQACVKHIL---------VKTQAEAQGV 224 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQ 264 ++ + G L + F + + N T+ Sbjct: 225 LRDLQGGADFAQLAQQKSQDPGSAADGGDLGCLSPGETVAAFDKVAFSAPLNQPQVVQTE 284 Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 G + + + + G + ++ +Y+ + I Sbjct: 285 YGWHVLVVTKRSEAGV--PPLSEVAPLIREQLARDAAQKYLDAQIARLNI 332 >gi|238650989|ref|YP_002916845.1| hypothetical protein RPR_06330 [Rickettsia peacockii str. Rustic] gi|238625087|gb|ACR47793.1| hypothetical protein RPR_06330 [Rickettsia peacockii str. Rustic] Length = 295 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 88/303 (29%), Gaps = 23/303 (7%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELE 73 L++ V + A I ++N E IT + R ++ + +L Sbjct: 4 LLLIITVFFTFNVAQASLPNIVASVNDEPITLNEFRARKKMIMALNNVESLTPAQDKQLS 63 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + ++ LI E+L Q + + +L + + + Sbjct: 64 DLVLKSLIDESLLFQYAGDRE--IPQEEIENAIKSIEDRNKMPHGSLLQYLKSRSVNPDS 121 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 F + + I +++ + EI V + + Sbjct: 122 FISQIKSELIKMNILSS-LSRSVQVSNKEIDVAILSSDQKDVEISMQVFTSKDGGNKAFT 180 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 ++ R+K + + L + ++ K+ + + + + Sbjct: 181 QMNNLKNRLKKCADVKKSLYDNFATMQIITDKLSKIEG------------VKQTIVKDLT 228 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + +N + E +C K+ L Y+ T KI + + + +R A Sbjct: 229 PDKASNVFEVNNKFEITLVCSKKILNVNEDENNYVVNFLTNKKISQKAQKMFENMRKKAA 288 Query: 314 IHY 316 I Sbjct: 289 IKI 291 >gi|228952655|ref|ZP_04114731.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229079483|ref|ZP_04212023.1| Foldase protein prsA 1 [Bacillus cereus Rock4-2] gi|229178680|ref|ZP_04306044.1| Foldase protein prsA 1 [Bacillus cereus 172560W] gi|228604838|gb|EEK62295.1| Foldase protein prsA 1 [Bacillus cereus 172560W] gi|228703853|gb|EEL56299.1| Foldase protein prsA 1 [Bacillus cereus Rock4-2] gi|228807121|gb|EEM53664.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 293 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 88/309 (28%), Gaps = 50/309 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 L + +++ + S + T + +T+ ++SK L+ Q L Sbjct: 11 LKKKKIFIGTIISCMMLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQQYGESTLY 65 Query: 74 KIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + + L+ + E K + + + F GL ED Sbjct: 66 QMMLSKALLDKYKVSDEEAKKKVEEAKDKMGENFKSTLEQLGLKNED------------- 112 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K+ + + + +K K + + Sbjct: 113 ELKEKMKPEIAFEKAIKATVTDKDVKDNYKPEMKVSHILVKD------------------ 154 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ +E ++++ G+ +F+ Sbjct: 155 ------EKTAKEIKEKVNNGEDFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAY 208 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306 K + P T G I + DK++L +K + +++ ++ V Sbjct: 209 KLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVN 268 Query: 307 KLRSNAIIH 315 L +A I Sbjct: 269 DLLKDADIK 277 >gi|218128451|ref|ZP_03457255.1| hypothetical protein BACEGG_00019 [Bacteroides eggerthii DSM 20697] gi|217989342|gb|EEC55655.1| hypothetical protein BACEGG_00019 [Bacteroides eggerthii DSM 20697] Length = 557 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 92/307 (29%), Gaps = 39/307 (12%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 F + F K++ L + + + + +A + ING+ + + Sbjct: 32 FDFVRFFKKVIMIKSCLTVIFLW--LGWNVFAQQDPVLMRINGKDVLRSEFEYSYNR--- 86 Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 ++L + G + V A G Sbjct: 87 ----------------DKSLLALKHATPGKYVEHFVNFKLKVGDAEAAG----------- 119 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 D F +++ +VK+ + + + +R + Sbjct: 120 ----LDTAFAFREEVENYRARLVKSYLTDTIEADAAARRWYDRMKAHHRGGQVRVRHIFK 175 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 +P N + D+ LR N + + D ++ + + Sbjct: 176 YLPQNVSGDALRDAVARMDSIYEYLRKNPGDNAFDACVERFSDDK-RSL-WVSWLQMPVE 233 Query: 246 FQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+++ + + + T +G+ + + ++R+L +K + A+ + + ++ Sbjct: 234 FEDVAFELPVGGVSQSFFTPQGIHIVKVLERRELPPFEKVKDEIMARQSRHEADRGVEVQ 293 Query: 305 VKKLRSN 311 V+KL+ Sbjct: 294 VEKLKKE 300 >gi|157826081|ref|YP_001493801.1| hypothetical protein A1C_05205 [Rickettsia akari str. Hartford] gi|157800039|gb|ABV75293.1| hypothetical protein A1C_05205 [Rickettsia akari str. Hartford] Length = 296 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 93/304 (30%), Gaps = 23/304 (7%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGEL 72 +++I V + A I ++N E IT + R ++ + +L Sbjct: 4 LILIIITVFFTFNVAQASLPNIVASVNDEPITLNEFRARKKMIMALNNVDGLTPSQDKQL 63 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 +A++ LI E+L Q ++ + +L+ + + N Sbjct: 64 SDLAIKSLIDESLLFQYAGDRE--IPQEEIDNAIKSIEDRNKMPQGSLLQYLESRSVNPN 121 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 F + + I +++ + EI A V + Sbjct: 122 SFIAQIKSELIKMNILSS-LSRSVQVSNKEIDAAILSSDQKDVEISMQVFTSQDSSKKAF 180 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 ++ R+K + + L + +E K+ + + + Sbjct: 181 TQMHHLKNRLKKCSDVKKSLYDNFATMEIITDKLSKIEG------------VKQTIVKDL 228 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 S + +N + E I +C K+ L Y+ T KI + + + +R A Sbjct: 229 SSDKASNVFEVNNKFEIILVCSKKILNVNEDENNYVVNFLTNKKISQKAQKMFENMRKKA 288 Query: 313 IIHY 316 I Sbjct: 289 AIKI 292 >gi|15892946|ref|NP_360660.1| hypothetical protein RC1023 [Rickettsia conorii str. Malish 7] gi|34581354|ref|ZP_00142834.1| hypothetical protein [Rickettsia sibirica 246] gi|81527992|sp|Q92GU9|Y1023_RICCN RecName: Full=Uncharacterized protein RC1023; Flags: Precursor gi|15620140|gb|AAL03561.1| unknown [Rickettsia conorii str. Malish 7] gi|28262739|gb|EAA26243.1| unknown [Rickettsia sibirica 246] Length = 295 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 89/303 (29%), Gaps = 23/303 (7%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELE 73 L++ V + A I ++N E IT + R ++ + +L Sbjct: 4 LLLIITVFFTFNVAQASLPNIVASVNDEPITLNEFRARKKMIMALNNVESLTPAQDKQLS 63 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +A++ LI E+L Q + + +L + + + Sbjct: 64 DLALKSLIDESLLFQYAGDRE--IPQEEIENAIKSIEDRNKMPHGSLLQYLKSRSVNPDS 121 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 F + + I +++ + EI V + + Sbjct: 122 FISQIKSELIKMNILSS-LSRSVQVSNKEIDVAILSSDQKDVEISMQVFTSKDGGNKAFT 180 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 ++ R+K + + L + ++ K+ + + + + Sbjct: 181 QMNNLKNRLKKCADVKKSLYDNFATMQIITDKLSKIEG------------VKQTIVKDLT 228 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + +N + E +C K+ L Y+ T KI + + + +R A Sbjct: 229 PDKASNVFEVNNKFEITLVCSKKILNVNEDENNYVVNFLTNKKISQKAQKMFENMRKKAA 288 Query: 314 IHY 316 I Sbjct: 289 IKI 291 >gi|268680813|ref|YP_003305244.1| hypothetical protein Sdel_2197 [Sulfurospirillum deleyianum DSM 6946] gi|268618844|gb|ACZ13209.1| conserved hypothetical protein [Sulfurospirillum deleyianum DSM 6946] Length = 283 Score = 73.6 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 108/306 (35%), Gaps = 31/306 (10%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K+ + + S + I IN E IT D+ K L Sbjct: 1 MKIKLKVLTFVTLGATLLFSPANAGTVDGISLIINKEPITLYDVFKYSQRFNLS------ 54 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 +K A+ L+ + L++ EI+K GI+ ++ V+ + A N ++ DF + + + + Sbjct: 55 KKDALDILVRQKLEEAEIKKLGISVENYEVDQYIETLATNNNMNTTDFLAMIRSKNVDVF 114 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGN-LEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 +K+ L + + + K + E+ A + + + +++ Sbjct: 115 EYKEELTNKLKRDKLYRKIISNKLQQISDGELKAYYDENLHEFSQANGFDVTIYTSA--- 171 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + E + + K GK L + L+ Sbjct: 172 ------------NQESLISLKKNPMSTFKDVELKEGSFQAGKMDANLATLLNK------- 212 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + ++ ++ + + + +K + K Y+ A+ + K +K EY +KL+ Sbjct: 213 TATSSFSSIVKSDQNYVMFFVKNKHNAQTVAFDDAKNYIHAKLSEGKEQKAIEEYFEKLK 272 Query: 310 SNAIIH 315 S+A I Sbjct: 273 SSANIK 278 >gi|167465135|ref|ZP_02330224.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 246 Score = 73.6 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 24/254 (9%), Positives = 67/254 (26%), Gaps = 24/254 (9%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 + V+++ C V + + + + I I GD+ Q + Sbjct: 14 LSLAVVVLVCFVIFGFTGAASGNGTVVAEIGKTKIRKGDLE--------QNLITHYGSSV 65 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + +++ K E + +G+ ++ + + E F +Q Sbjct: 66 LNQMLDREAIKMEAQSAGLQISDADIDKELKVMMQ----AYESEEVFYQSMKEQLGMSRQ 121 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + +++ + EI Q ++ + + + N+ Sbjct: 122 EVKDDVYYKLLLEKVATKDIQVSDSEIQDYIQAHPEEYAKKREMHLRRVTTKTREQANKV 181 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD---LHPQFQNLLKKS 253 + + + + G ++ E D + Sbjct: 182 VAA---------FSKGDDFAKLARDRSIDDYANNGGDLGWVKEDDPLTDKQVMKQAKDLK 232 Query: 254 QNNTTNPYVTQKGV 267 + P T +G Sbjct: 233 VGQISKPVQTNEGY 246 >gi|46198541|ref|YP_004208.1| peptidyl-prolyl cis-trans isomerase [Thermus thermophilus HB27] gi|46196163|gb|AAS80581.1| probable peptidyl-prolyl cis-trans isomerase [Thermus thermophilus HB27] Length = 337 Score = 73.6 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 29/317 (9%), Positives = 70/317 (22%), Gaps = 29/317 (9%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL---- 63 + F + + + + + ++ + + E IT R L Sbjct: 17 RMRSFTRSMLAWGMRAFLLALTLLLVPMALAQGEVVAQVGPEAITREAFELRYGLFVRSA 76 Query: 64 ----------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 + + + ++ L E Q K G+ D V Sbjct: 77 LAQLGLPDTEEARALLAAYRPAFLEALAREKALLQRARKEGLYPDPAAVEARVHALKEAF 136 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 + G +++ +A + + + + + A Sbjct: 137 PEEEALEEALRQAGVPGLEAYRRLVAEAMALEAL-EARYRSRLAVSRAALKALWLLSPEY 195 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIG 232 L + + +A R + G Sbjct: 196 RHPTLYCARHLLVPTREEAE----------EARLRLARGEAFAEVARAVSQDPGSKEEGG 245 Query: 233 KAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 E P F+ ++ + P T+ G I + R + + Sbjct: 246 DLGCAPEGTYVPAFEEALVRLRPGEVSGPVRTEFGYHLILLE--RVVPPGRYPLEEAAPL 303 Query: 292 NTPTKIEKHEAEYVKKL 308 ++ + L Sbjct: 304 LEKEVADRAWERLEEAL 320 >gi|298206780|ref|YP_003714959.1| putative exported peptidyl-prolyl cis-trans isomerase [Croceibacter atlanticus HTCC2559] gi|83849412|gb|EAP87280.1| putative exported peptidyl-prolyl cis-trans isomerase [Croceibacter atlanticus HTCC2559] Length = 496 Score = 73.6 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 29/254 (11%), Positives = 67/254 (26%), Gaps = 12/254 (4%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQEIEKSGITF 97 + + V+ D DI K LK Q + +L+ + L I Sbjct: 73 DGVAAVVGEYVVLDSDIDKAYIELKSQGISVQDITRCNLTGKLLEDKLYAHHAVIDSIMV 132 Query: 98 D----SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + + V+ R G + + + + Q+ ++ + Sbjct: 133 NDAEVNAYVDQQIDYMKRQLGTMEKVLNFYQKDNEGEFRAELFEINKQNKLAGEMQRSIV 192 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 E+ + + + I Q Q+ I E R + Sbjct: 193 DGIEITPEEVREYFNGIPKEDRPLFGDEIEIAQIIIQPEIPQAERQRVIDRLNEMRRDVL 252 Query: 214 KDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 + A + G+ + +F++ + + P+ T+ G Sbjct: 253 DNGASFATKAVLYSQDTGSRANGGQYSLTRKDPFVKEFKDAAFSLQEGEISEPFETEFGF 312 Query: 268 EYIAICDKRDLGGE 281 + + R + Sbjct: 313 HILMVDKIRGQTVD 326 >gi|329894935|ref|ZP_08270734.1| Peptidyl-prolyl cis-trans isomerase ppiD [gamma proteobacterium IMCC3088] gi|328922664|gb|EGG29999.1| Peptidyl-prolyl cis-trans isomerase ppiD [gamma proteobacterium IMCC3088] Length = 624 Score = 73.6 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 44/401 (10%), Positives = 101/401 (25%), Gaps = 92/401 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + S + + +++ F + + S +NG+ I ++ + Sbjct: 1 MLQDIRNSTQGPVFKVIVGLIVLSFALFGVESILLGGSDDS-VALVNGDKIRAVEVQQAA 59 Query: 61 ALLKLQ-------------KINGELEKIAVQELIVETLKKQEIEK---SGITFDSNTVNY 104 K Q + +L A++ L+ L++Q E + Sbjct: 60 NRQKQQIAAMLGENFDPSLIDDAQLSARALEGLVGNKLQQQWAESLGLTASDVQLGAQVA 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV----------------- 147 + SAE + L G F++ L + I + Sbjct: 120 AIPAFQIDGKFSAELYKQSLAAAGFTPLTFREALRVDEIVKQLNGGLLASEFVTGAEARA 179 Query: 148 ----------------VKNDFMLKYGNLEMEIPANKQKMKNIT----------------- 174 + F + +I A Sbjct: 180 LARVNGETRSVRYAKVAGDRFQNTVEITQDQIQAYYDSNAAQFVSEEAVVLDYITLRADD 239 Query: 175 ----------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 Y ++ D + + + +A+E+ + + Sbjct: 240 FVEPVAEADLRAAYEQEISSYAYQDEARVSHILLIQGDDEADEAYAQRIQSAQTALTDGE 299 Query: 225 KIH------------DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G Y + + +K N + P +T G I Sbjct: 300 AFSVVAERLSDDIGSSSDGGDLGYTAGDVFPAEMEEAIKGLDINEVSGPVLTDAGTHLIT 359 Query: 272 ICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + D+R + + +++ L A + ++ V+ L+ Sbjct: 360 VTDRRSSEPPSFMEMRSELEASLSQADAQRRLVSQVEALKD 400 >gi|327541306|gb|EGF27848.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopirellula baltica WH47] Length = 350 Score = 73.6 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 27/272 (9%), Positives = 74/272 (27%), Gaps = 17/272 (6%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQ------EIEKSGITFDSNTVNYFFVQ-- 108 + +KL+ L + ++ E + ++ Sbjct: 51 EDELHYVKLRMTRSLLVQTIQSRMLREAFLLEQVGTAAADKRREAEATMAAKARQMFYET 110 Query: 109 -----HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + S + L K+G ++ Q + +++ EI Sbjct: 111 ELPGLMKKANVDSKAELDDLLRKEGSSLAFRQREFMDQMLGSLYIRSKVNKDPAVSLSEI 170 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 Q+ ++ + R ++ + + + ++ L + + + Sbjct: 171 VRYYQEHQSKYEHKARARWEQLTVMFSNHATRDAARSKLSQMANEALYGGSMTSVAKAQS 230 Query: 224 SKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + S G + + L Q + ++ I + ++ D G Sbjct: 231 EEPFASSGGLHDWTNQGSLVSTILDQQIFSLPIGEMSDVIEDNDAYHVIRVLEREDAGVT 290 Query: 282 I--ALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 L+ +S KI + E + ++R Sbjct: 291 PVGELQDDISDILRQQKIRADQEEVMVEVRQR 322 >gi|229190397|ref|ZP_04317398.1| Foldase protein prsA 1 [Bacillus cereus ATCC 10876] gi|228593181|gb|EEK50999.1| Foldase protein prsA 1 [Bacillus cereus ATCC 10876] Length = 293 Score = 73.6 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 88/309 (28%), Gaps = 50/309 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 L + +++ + S + T + +T+ ++SK L+ Q L Sbjct: 11 LKKKKIFIGTIISCMMLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQQYGESTLY 65 Query: 74 KIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + + L+ + E K + + F GL ED Sbjct: 66 QMMLSKALLDKYKVSDEEAKKKVEEAKDKRGENFKSTLEQLGLKNED------------- 112 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K+ + + + + +K K + + Sbjct: 113 ELKEKMKPEIAFEEAIKATVTDKDVKDNYKPEMKVSHILVKD------------------ 154 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ +E ++++ G+ +F+ Sbjct: 155 ------EKTAKEIKEKVNNGEDFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAY 208 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306 K + P T G I + DK++L +K + +++ ++ V Sbjct: 209 KLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVN 268 Query: 307 KLRSNAIIH 315 L +A I Sbjct: 269 DLLKDADIK 277 >gi|220922111|ref|YP_002497412.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium nodulans ORS 2060] gi|219946717|gb|ACL57109.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium nodulans ORS 2060] Length = 277 Score = 73.6 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 25/241 (10%), Positives = 70/241 (29%), Gaps = 6/241 (2%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I + +E++ + L+ E + + D ++ Sbjct: 24 ISRAVISREVQNHPAPTPVAAWRAAALALVLREALAQEARRLGIRAEPATDAEGRRETEE 83 Query: 141 QSIWPDVVKND-FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 ++ +V+ + + + E + + + +LF+ + + Sbjct: 84 EAGMRALVEREAVVPEPTEEECRRYYERNRARFRAPDLVEASHILFAARKDDATGYELAR 143 Query: 200 -KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT- 257 + ++ G + P+F+ L + Sbjct: 144 LNARTVVAMLKADPDTFEELARVHSACPSAELGGSLGQVTTGQTTPEFEAALLGMRPGET 203 Query: 258 -TNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + P T+ G I + + D A++ ++ + + +A+YV +L + A I Sbjct: 204 SSEPVETRYGFHVIRLGRRIDGCTLPFEAVRQRIAEYLSEAVRRRAQAQYVARLLAQARI 263 Query: 315 H 315 Sbjct: 264 E 264 >gi|23500050|ref|NP_699490.1| peptidyl-prolyl cis-trans isomerase [Brucella suis 1330] gi|254702703|ref|ZP_05164531.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella suis bv. 3 str. 686] gi|261753291|ref|ZP_05997000.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 3 str. 686] gi|23463639|gb|AAN33495.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella suis 1330] gi|261743044|gb|EEY30970.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 3 str. 686] Length = 311 Score = 73.6 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 30/280 (10%), Positives = 78/280 (27%), Gaps = 40/280 (14%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG I + DI + L A + E L ++ Sbjct: 51 AVSVNGVTIDEADILTEAQNHPAENPGAALLSAARALAVRELLLQRAR------------ 98 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 ++ + D + ++ V++ + + E Sbjct: 99 ------------------EIGIEPEHEKDAEGRAETDEDALVRMVIEREVDV-PSASRDE 139 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220 + ++ ++ I + + R + + + Sbjct: 140 AQRYYENNRHRFTSAPILEASHILIAADPADQETRDAARQTATRLAAAVIAEPATFASVA 199 Query: 221 -KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN--PYVTQKGVEYIAICDKR- 276 +++S G L P+F+ L++ T P ++ G + + D+R Sbjct: 200 LEYSSCPSGAQGGNLGQLTRGSTVPEFERALERMTPGETTANPIESRFGYHIVRL-DRRV 258 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ + K ++Y+ L + A I Sbjct: 259 EGEELPFDYVVDKIAGWLEASTWSKAVSQYIAILAAEAEI 298 >gi|326577521|gb|EGE27401.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis O35E] Length = 617 Score = 73.6 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 34/396 (8%), Positives = 84/396 (21%), Gaps = 88/396 (22%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT----DGDIS 57 + L + L LI + + ++ A+ + +V+ +++ Sbjct: 1 MENMRNFLKSWPGRLVLVGTLIPMAFLGVGTFGGHAIQPNELIKVGNQVVDVATFQAEVN 60 Query: 58 KRIALLKLQ------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 L Q L+++ ++ L + L + + G+T + + Sbjct: 61 AERNALIEQGVDASLINEHALQQLILKRLTDKALLENQASYLGMTVSDEMITQILQHYEV 120 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFK------------------------------------ 135 F Sbjct: 121 FHDNGQFSNDRFAAYLQQNGLTKDVLFAIERLRLSLRQLITGIVGTAIYPNSEVSKLIDL 180 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ-- 193 Q A + D++ + + +I A + ++ ++ + + N L Sbjct: 181 QLEAREVWVHRYHWQDYVDQVQISDAQIQAYFDEHQDKLIKPATVDLSYIELDPNVLSVG 240 Query: 194 -------------------------------NQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 Q R + + Sbjct: 241 TPTEQEINAQYANYLRENGITDGRELAQILLTGPDAQNRAAKIQSKLNAGESFEALAKAH 300 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK----SQNNTTNPYVTQKGVEYIAICDKRDL 278 + + G S + + S + P T G + Sbjct: 301 SDDPSGSNGGVIGSFNPSVFGEYAAGVEQALSGLSVGQISQPVQTGFGYHIFKVT---KA 357 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + A + Q + + L +A I Sbjct: 358 SNDTPNIASMRDQLMDRAAKLKRDQAFADL--SAKI 391 >gi|229069842|ref|ZP_04203124.1| Foldase protein prsA 1 [Bacillus cereus F65185] gi|228713245|gb|EEL65138.1| Foldase protein prsA 1 [Bacillus cereus F65185] Length = 293 Score = 73.6 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 87/309 (28%), Gaps = 50/309 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 L + +++ + S + T + +T+ ++SK L+ Q L Sbjct: 11 LKKKKIFIGTIISCMMLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQQYGESTLY 65 Query: 74 KIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + + L+ + E K + + + F GL ED Sbjct: 66 QMMLSKALLDKYKVSDEEAKKKVEEAKDKMGENFKSTLEQLGLKNED------------- 112 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K+ + + + +K K + + Sbjct: 113 ELKEKMKPEIAFEKAIKATVTDKDVKDNYKPEMKVSHILVKD------------------ 154 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ +E +++ G+ +F+ Sbjct: 155 ------EKTAKEIKEKVNNGEDFAALARQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAY 208 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306 K + P T G I + DK++L +K + +++ ++ V Sbjct: 209 KLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVN 268 Query: 307 KLRSNAIIH 315 L +A I Sbjct: 269 DLLKDADIK 277 >gi|296112838|ref|YP_003626776.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis RH4] gi|295920532|gb|ADG60883.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis RH4] gi|326561505|gb|EGE11849.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis 46P47B1] gi|326567538|gb|EGE17653.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis BC1] gi|326571415|gb|EGE21430.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis BC7] Length = 617 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 34/396 (8%), Positives = 85/396 (21%), Gaps = 88/396 (22%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT----DGDIS 57 + L + L LI + + ++ A+ + +V+ +++ Sbjct: 1 MENMRNFLKSWPGRLVLVGTLIPMAFLGVGTFGGHAIQPNELIKVGNQVVDVATFQAEVN 60 Query: 58 KRIALLKLQ------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 L Q L+++ ++ L + L + + G+T + + Sbjct: 61 AERNALIEQGVDASLINEHALQQLILKRLTDKALLENQASYLGMTVSDEMITQILQHYEV 120 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFK------------------------------------ 135 F Sbjct: 121 FHDNGQFSNDRFAAYLQQNGLTKDVLFAIERLRLSLRQLITGIVGTAIYPNSEVSKLIDL 180 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ-- 193 Q A + D++ + + +I A + ++ ++ + + N L Sbjct: 181 QLEAREVWVHRYHWQDYVDQVQISDAQIQAYFDEHQDKLIKPATVDLSYIELDPNVLSVG 240 Query: 194 -------------------------------NQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 Q R + + Sbjct: 241 TPTEQEINAQYANYLRENGITDGRELAQILLTGPDAQNRAAKIQSKLNAGESFEALAKAH 300 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK----SQNNTTNPYVTQKGVEYIAICDKRDL 278 + + G S + + S + P T G + + Sbjct: 301 SDDPSGSNGGVIGSFNPSVFGEYAAGVEQALSGLSVGQISQPVQTGFGYHIFKVT---KV 357 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + A + Q + + L +A I Sbjct: 358 SNDTPNIASMRDQLMDRAAKLKRDQAFADL--SAKI 391 >gi|182679969|ref|YP_001834115.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Beijerinckia indica subsp. indica ATCC 9039] gi|182635852|gb|ACB96626.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Beijerinckia indica subsp. indica ATCC 9039] Length = 303 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 87/302 (28%), Gaps = 34/302 (11%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK------LQKINGELEKI 75 L+ V ++ +A+ I G ++ +I RI LL L K +L + Sbjct: 6 LLSMIPVLSLTTPVFAVDDDIVGRAGGMDVSMKEIRARIDLLPETDRATLTKDPAQLTQF 65 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 L L ++ + A L + + D Sbjct: 66 VRGYLADRVLLREAHDTGFDQKTPIKARLDQAHDALLMELYLQSVTHVPDTYPTEAE--- 122 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 V+ + L + + ++ + D+K +++ Sbjct: 123 ------------VRAAYDANKSALIA-------PRRYQLAQIFIAAPKIDQTKDDKTKDE 163 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + + ++ + + +++ G+ +L E L P+ + + + Sbjct: 164 KTSARLDELMKKLQGKSGDFEVLAREYSDAKAEAAKGGEIGWLAEPSLMPEIRQAVSGLT 223 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS----AQNTPTKIEKHEAEYVKKLR 309 + TT P G + I D R+ G E + Q ++ Y+ L Sbjct: 224 KGATTAPIRLNDGWHILHILDIREAGSEPLPFTEVKGPLAEQMRRQRLTNERQTYLTHLL 283 Query: 310 SN 311 Sbjct: 284 KQ 285 >gi|289668772|ref|ZP_06489847.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 656 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 15/148 (10%), Positives = 47/148 (31%), Gaps = 4/148 (2%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++K + + + L +L S + + K K A E++ + Sbjct: 274 KRYEEEKARFVEPDQRLASHILISAGSDAAAQKAAEAKAAKLAAEAKQPGADFAALAKAN 333 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + + G ++ + + F++ + P ++ G I + + + G Sbjct: 334 SQDPGSKNAGGDLGWVEKGAMVKPFEDALFSMKAGDVVGPIKSEFGYHVIQLREVKGGQG 393 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + Q +++ + + Sbjct: 394 KS--FEQVRDQLAAEQLKADADKAFADI 419 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 22/192 (11%), Positives = 47/192 (24%), Gaps = 34/192 (17%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI----N--------- 47 M K+ S +I +++ F V SY ++ + N Sbjct: 1 MLQKLRDKTSGWIATAILGLLMVPFLFVIDNSYLGGIGANN-VAKVQAPPNWWKSAPSWW 59 Query: 48 -------GEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++Q+ + E + +L+ E + + Sbjct: 60 PVSLLWQHHEISTQDFRARFEQARMQERQRQGENFDPRTFESRENKLQVLDQLVDEQVVR 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E +GI TV + + G + + Sbjct: 120 LGAEDAGIVIGDATVRDYIANIQAFQVDGKFSPDQYRAALAQGTPPRTPAQFDALVRDSL 179 Query: 148 VKNDFMLKYGNL 159 ++ Sbjct: 180 QQSVIPQAVAES 191 >gi|326566698|gb|EGE16837.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis 103P14B1] Length = 617 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 34/396 (8%), Positives = 85/396 (21%), Gaps = 88/396 (22%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT----DGDIS 57 + L + L LI + + ++ A+ + +V+ +++ Sbjct: 1 MENMRNFLKSWPGRLVLVGTLIPMAFLGVGTFGGHAIQPNELIKVGNQVVDVATFQAEVN 60 Query: 58 KRIALLKLQ------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 L Q L+++ ++ L + L + + G+T + + Sbjct: 61 AERNALIEQGVDASLINEHALQQLILKRLTDKALLENQASYLGMTVSDEMITQILQHYEV 120 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFK------------------------------------ 135 F Sbjct: 121 FHDNGQFSNDRFAAYLQQNGLTKDVLFAIERLRLSLRQLITGIVGTAIYPNSEVSKLIDL 180 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ-- 193 Q A + D++ + + +I A + ++ ++ + + N L Sbjct: 181 QLEAREVWVHRYHWQDYVDQVQISDAQIQAYFDEHQDKLIKPATVDLSYIELDPNVLSVG 240 Query: 194 -------------------------------NQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 Q R + + Sbjct: 241 TPTEQEINAQYANYLRENGITDGRELAQILLTGPDAQNRAAKIQSKLNAGESFEALAKAH 300 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK----SQNNTTNPYVTQKGVEYIAICDKRDL 278 + + G S + + S + P T G + + Sbjct: 301 SDDPSGSNGGVIGSFNPSVFGEYAAGVEQALSGLSVGQISQPVQTGFGYHIFKVT---KV 357 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + A + Q + + L +A I Sbjct: 358 SNDTPNIASMRDQLMDRAAKLKRDQAFADL--SAKI 391 >gi|325927445|ref|ZP_08188692.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas perforans 91-118] gi|325542195|gb|EGD13690.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas perforans 91-118] Length = 656 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 22/249 (8%), Positives = 68/249 (27%), Gaps = 5/249 (2%) Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 AL++ + + + + E + + A +T ++ Sbjct: 173 ALVRDSLQQSVIPQAVAESGFATKS-EFERLLKLMGETRDVELAMLPPPAADTAPVSDAQ 231 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 D + + I+ + + + +K + + + L Sbjct: 232 IKQWYDGHAQDFRQPETVTIEYVELNAATMPPATAADEATLRKRYEDEKARFVEPEQRLA 291 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 +L S + + K K A E++ + + + G ++ + Sbjct: 292 SHILISAGADAAAQKAAEAKAAKLAAEAKQPGADFAALAKANSQDPGSKDAGGDLGWVEK 351 Query: 240 SDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 + F++ P ++ G I + + + G+ + Q +++ Sbjct: 352 GTMVKPFEDALFSMKAGEVVGPIKSEFGYHVIQLREVKGGQGKS--FEQVRDQLAAEQLK 409 Query: 299 KHEAEYVKK 307 + Sbjct: 410 ADADKAFAD 418 Score = 49.7 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 25/236 (10%), Positives = 57/236 (24%), Gaps = 34/236 (14%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-------------- 46 M K+ S +I ++I F V SY ++ + Sbjct: 1 MLQKLRDKTSGWIATAILGLLMIPFLFVIDNSYLGGIGANN-VAKVQAPPTWWKSAPSWW 59 Query: 47 ------NGEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++Q+ + EK + +L+ E + + Sbjct: 60 PVSLLWQHHEISTQDFRARFEQARMQERQRQGEKFDPRTFESRENKLQVLDQLVDEQVVR 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E +GI TV + + G + + Sbjct: 120 LGAEDAGIVIGDATVRDYIANIPAFQVDGKFSPDQYRAALAQGTPPRTPAQFDALVRDSL 179 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++ + +++ + + + P Q + Sbjct: 180 QQSVIPQAVAESGFATKSEFERLLKLMGETRDVELAMLPPPAADTAPVSDAQIKQW 235 >gi|289664180|ref|ZP_06485761.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 656 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 15/148 (10%), Positives = 47/148 (31%), Gaps = 4/148 (2%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++K + + + L +L S + + K K A E++ + Sbjct: 274 KRYEEEKARFVEPDQRLASHILISAGSDAAAQKAAEAKAAKLAAEAKQPGADFAALAKAN 333 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + + G ++ + + F++ + P ++ G I + + + G Sbjct: 334 SQDPGSKNAGGDLGWVEKGAMVKPFEDALFSMKAGDVVGPIKSEFGYHVIQLREVKGGQG 393 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + Q +++ + + Sbjct: 394 KS--FEQVRDQLAAEQLKADADKAFADI 419 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 22/192 (11%), Positives = 47/192 (24%), Gaps = 34/192 (17%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI----N--------- 47 M K+ S +I +++ F V SY ++ + N Sbjct: 1 MLQKLRDKTSGWIATAILGLLMVPFLFVIDNSYLGGIGANN-VAKVQAPPNWWKSAPSWW 59 Query: 48 -------GEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++Q+ + E + +L+ E + + Sbjct: 60 PVSLLWQHHEISTQDFRARFEQARMQERQRQGENFDPRTFESRENKLQVLDQLVDEQVVR 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E +GI TV + + G + + Sbjct: 120 LGAEDAGIVIGDATVRDYIANIQAFQVDGKFSPDQYRAALAQGTPPRTPAQFDALVRDSL 179 Query: 148 VKNDFMLKYGNL 159 ++ Sbjct: 180 QQSVIPQAVAES 191 >gi|229127713|ref|ZP_04256702.1| Foldase protein prsA 1 [Bacillus cereus BDRD-Cer4] gi|228655790|gb|EEL11639.1| Foldase protein prsA 1 [Bacillus cereus BDRD-Cer4] Length = 293 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 88/309 (28%), Gaps = 50/309 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 L + +++ + S + T + +T+ ++SK L+ Q L Sbjct: 11 LKKKKIFIGTIISCVMLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQQYGESTLY 65 Query: 74 KIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + + L+ + E K + + + F GL ED Sbjct: 66 QMMLSKALLDKYKVSDEEAKKKVEEAKDKMGENFKSTLEQLGLKNED------------- 112 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K+ + + + +K K + + Sbjct: 113 ELKEKMKPEIAFEKAIKATVTDKDVKNNYKPEMKVSHILVKD------------------ 154 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ +E +++ G+ +F+ Sbjct: 155 ------EKTAKEIKEKVNNGEDFAALANQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAY 208 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306 K ++P T G I + DK++L +K + +++ ++ V Sbjct: 209 KLDAGQVSDPVKTTYGYHIIKVTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVN 268 Query: 307 KLRSNAIIH 315 L +A I Sbjct: 269 DLLKDADIK 277 >gi|326576612|gb|EGE26519.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis 101P30B1] Length = 617 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 34/396 (8%), Positives = 85/396 (21%), Gaps = 88/396 (22%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT----DGDIS 57 + L + L LI + + ++ A+ + +V+ +++ Sbjct: 1 MENMRNFLKSWPGRLVLVGTLIPMAFLGVGTFGGHAIQPNELIKVGNQVVDVATFQAEVN 60 Query: 58 KRIALLKLQ------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 L Q L+++ ++ L + L + + G+T + + Sbjct: 61 AERNALIEQGVDASLINEHALQQLILKRLTDKALLENQASYLGMTVSDEMITQILQHYEV 120 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFK------------------------------------ 135 F Sbjct: 121 FHDNGQFSNDRFAAYLQQNGLTKDVLFAIERLRLSLRQLITGIVGTAIYPNSEVSKLIDL 180 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ-- 193 Q A + D++ + + +I A + ++ ++ + + N L Sbjct: 181 QLEAREVWVHRYHWQDYVDQVQISDAQIQAYFDEHQDKLIKPATVDLSYIELDPNVLSVG 240 Query: 194 -------------------------------NQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 Q R + + Sbjct: 241 TPTEQEINAQYANYLRENGITDGRELAQILLTGPDAQNRAAKIQSKLNAGESFEALAKAH 300 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK----SQNNTTNPYVTQKGVEYIAICDKRDL 278 + + G S + + S + P T G + + Sbjct: 301 SDDPSGSNGGVIGSFNPSVFGEYAAGVEQALSGLSVGQISQPVQTGFGYHIFKVT---KV 357 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + A + Q + + L +A I Sbjct: 358 SNDTPNIASMRDQLMDRAAKLKRDQAFADL--SAKI 391 >gi|78046641|ref|YP_362816.1| peptidylprolyl isomerase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035071|emb|CAJ22716.1| peptidylprolyl isomerase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 656 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 22/249 (8%), Positives = 68/249 (27%), Gaps = 5/249 (2%) Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 AL++ + + + + E + + A +T ++ Sbjct: 173 ALVRDSLQQSVIPQAVAESGFATKS-EFERLLKLMGETRDVELAMLPPPAADTAPVSDAQ 231 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 D + + I+ + + + +K + + + L Sbjct: 232 IKQWYDGHAQDFRQPETVTIEYVELNAATMPPATAADEATLRKRYEDEKARFVEPEQRLA 291 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 +L S + + K K A E++ + + + G ++ + Sbjct: 292 SHILISAGADAAAQKAAEAKAAKLAAEAKQPGADFAALAKANSQDPGSKDAGGDLGWVEK 351 Query: 240 SDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 + F++ P ++ G I + + + G+ + Q +++ Sbjct: 352 GAMVKPFEDALFSMKAGEVVGPIKSEFGYHVIQLREVKGGQGKS--FEQVRDQLAAEQLK 409 Query: 299 KHEAEYVKK 307 + Sbjct: 410 ADADKAFAD 418 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 25/236 (10%), Positives = 57/236 (24%), Gaps = 34/236 (14%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-------------- 46 M K+ S +I ++I F V SY ++ + Sbjct: 1 MLQKLRDKTSGWIATAILGLLMIPFLFVIDNSYLGGIGANN-VAKVQAPPTWWKSAPSWW 59 Query: 47 ------NGEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++Q+ + EK + +L+ E + + Sbjct: 60 PVSLLWQHHEISTQDFRARFEQARMQERQRQGEKFDPRTFESRENKLQVLDQLVDEQVVR 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E +GI TV + + G + + Sbjct: 120 LGAEDAGIVIGDATVRDYIANIPAFQVDGKFSPDQYRAALAQGTPPRTPAQFDALVRDSL 179 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++ + +++ + + + P Q + Sbjct: 180 QQSVIPQAVAESGFATKSEFERLLKLMGETRDVELAMLPPPAADTAPVSDAQIKQW 235 >gi|16077140|ref|NP_387953.1| protein secretion PrsA [Bacillus subtilis subsp. subtilis str. 168] gi|221307882|ref|ZP_03589729.1| hypothetical protein Bsubs1_00365 [Bacillus subtilis subsp. subtilis str. 168] gi|221312204|ref|ZP_03594009.1| hypothetical protein BsubsN3_00365 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317137|ref|ZP_03598431.1| hypothetical protein BsubsJ_00365 [Bacillus subtilis subsp. subtilis str. JH642] gi|221321400|ref|ZP_03602694.1| hypothetical protein BsubsS_00365 [Bacillus subtilis subsp. subtilis str. SMY] gi|586895|sp|P37566|YACD_BACSU RecName: Full=Uncharacterized protein yacD gi|467461|dbj|BAA05307.1| unknown [Bacillus subtilis] gi|2632339|emb|CAB11848.1| putative protein secretion PrsA homolog [Bacillus subtilis subsp. subtilis str. 168] Length = 297 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 96/319 (30%), Gaps = 36/319 (11%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIV-SYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 S + + +L V I + S + S TI G+ +T + K + Sbjct: 1 MKSRTIWTIILGALLVCCIAVAYTLTKSQAGASSSGESIATIGGKSVTREEWLKEM---- 56 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + K ++++I + +Q +K+ + + V+ F+ ED Sbjct: 57 ----EDQYGKSTLEDMINVRVVEQLAKKNKLKISKSEVDREFLLIKAVNNSFYEDE---- 108 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + ++ Q + ++++ E+ + K K + + R Sbjct: 109 -------HTTEKEWKDQIRYNILLEDLLTRDIDISNKELESFYNKNKELYQFDDSYRIRH 161 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-- 242 + D + + + + + E+ + G ++ E+ Sbjct: 162 IVVKDEEEAREVLKE--------LKGGSSFEAVAAERSTDRYTSPYGGDLGFVTEASDNI 213 Query: 243 -HPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIE 298 + ++ + P G I + +K +K + Q ++ Sbjct: 214 PSAYIEEAKTLKEDEWSQEPIKVSNGYAIIQLKEKLKARTFSFDEVKDQIRRQIAMDQLG 273 Query: 299 KHEAEYVKKLRSNAIIHYY 317 VK L A + ++ Sbjct: 274 DKAT--VKTLWKEADVSWF 290 >gi|306520092|ref|ZP_07406439.1| putative peptidyl-prolyl isomerase [Clostridium difficile QCD-32g58] Length = 323 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 43/301 (14%), Positives = 97/301 (32%), Gaps = 31/301 (10%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 ++ +N IT K A+L + ++ EL KK + + Sbjct: 26 NKSLAKVNDVEITKEQYKKTKAVLSATNNY--INGQSLDELEKTLDKKGRNKLENVIISF 83 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-------- 151 N Q A++ GL+ Q + D + + V + Sbjct: 84 MVDNELLYQEAKDKGLTPSKSEVDSKYQELEDKMNLNTSYKEKMDKAGVDKEYLKQEISR 143 Query: 152 ----------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN------Q 195 F + + ++ A K E + + + +K + + Sbjct: 144 DLAIDKNKKAFEDRINISDNDMEAYYTSHKKDFNVEEVSASQILISTLDKNKKEVSKDKK 203 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF-QNLLKKS 253 ++K+ + + +K++ + G+ Y + D + +F + + K Sbjct: 204 EALKKKADNILTKIKNGESFESLAKKYSDDKATGKNGGQLGYFTKDDKNAEFTKEVFKLK 263 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +N +N + T G + + DKR+ + + + + E++KKL +A Sbjct: 264 KNEVSNVFETSYGYHIVKVTDKRER---QKSFNECQSLIRESILNEKYIEHIKKLNEDAK 320 Query: 314 I 314 I Sbjct: 321 I 321 >gi|58580660|ref|YP_199676.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425254|gb|AAW74291.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 675 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 21/244 (8%), Positives = 71/244 (29%), Gaps = 8/244 (3%) Query: 70 GELEKIAVQELIVETLK----KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 L++ + + I ++ + E + + A +T ++ Sbjct: 196 DSLQQSVIPQAIADSGFATKSEFERLLKLMGETRDVELAMLPPPAMDTAPVSDAQIKQWY 255 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 D + + I+ + + + ++K + + + L +L Sbjct: 256 DGHTQDFRQPETVTIEYVELNAATMRPATAADEATLRKRYEEEKARFVEPDQRLASHILI 315 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHP 244 S + + K K A E++ + + + G ++ + + Sbjct: 316 SAGSDAAAQKAAEAKAAKLAAEAKAPGADFAALAKANSQDPGSKDAGGDLGWVEKGTMVK 375 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 F++ + P ++ G I + + + G+ + + +++ + Sbjct: 376 PFEDALFSMKAGDVVGPIKSEFGYHVIQLREVKGGQGKS--FEQVRDKLAAEQLKADADK 433 Query: 304 YVKK 307 Sbjct: 434 AFAD 437 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 24/236 (10%), Positives = 58/236 (24%), Gaps = 34/236 (14%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI----N--------- 47 M K+ S +I ++I F V SY ++ + N Sbjct: 20 MLQKLRDKTSGWIATAILGLLMIPFLFVIDNSYLGGIGANN-VAKVQAPPNWWKSAPSWW 78 Query: 48 -------GEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++Q+ + E + +L+ E + + Sbjct: 79 PVSLLWQHHEISTQDFRARFEQARMQERQRQGENFDPRTFESRENKLQVLDQLVDEQVVR 138 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E +GI +V + + G + + Sbjct: 139 LGAEDAGIVIGDASVRDYIANIQAFQVDGKFSPDKYRAALAQGTPPRTPAQFDALVRDSL 198 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++ + + +++ + + + P Q + Sbjct: 199 QQSVIPQAIADSGFATKSEFERLLKLMGETRDVELAMLPPPAMDTAPVSDAQIKQW 254 >gi|297538717|ref|YP_003674486.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylotenera sp. 301] gi|297258064|gb|ADI29909.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylotenera sp. 301] Length = 633 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 44/159 (27%), Gaps = 7/159 (4%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 FM + E+ R I Q+ AEE + Sbjct: 239 FMRNVNVSDDEVKKYYDDNAAKFQGNEQRRASHILIAFGVSATPEQKQQAKAKAEEILAQ 298 Query: 212 LPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQK 265 + KD +K E+ A V G + F++ N ++ ++ Sbjct: 299 IKKDPSKFEQLAVKNSQDPGSAVKGGDLGSFSRGAMVKPFEDAAFSMKVNQVSDLVESEF 358 Query: 266 GVEYIAICDK-RDLGGEIALKAYLSAQNTPTKIEKHEAE 303 G I + + +LK + K + A+ Sbjct: 359 GYHIIKVTEISGQNADFNSLKPQIKGDLMFQKAKDEFAK 397 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 56/163 (34%), Gaps = 14/163 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ T ++ + I F + I SY S A ++ + G I+ + Sbjct: 1 MLDQIRTVAQGWVGKALLALITIPFALFGIDSYLSSAGNNVAVAKVGGNSISVQAYDNAL 60 Query: 61 ALLK-----------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---F 106 ++ Q + E++ + + +LI + L EI + + + + Sbjct: 61 KNMRNRLQSEGKFEQAQLDSPEVKSLVLDQLINKQLLSDEIHNAKYAISDSQLATYVTGM 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 + ++ S E + L + + + F+ + + Sbjct: 121 PEFQKDGKFSQELYDQTLSQNQLSPSKFEAGMRADLLAQQAQD 163 >gi|172064366|ref|YP_001812017.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria MC40-6] gi|171996883|gb|ACB67801.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria MC40-6] Length = 282 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 36/322 (11%), Positives = 81/322 (25%), Gaps = 57/322 (17%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQK 67 + + + +P+ + A + T+NG ITD +++ + K Q Sbjct: 1 MQMTFNRILIATAIAWQMALPVQAEAQSASLPAGSVATVNGTPITDAEVNAVLQASK-QP 59 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 ++ + +LI L +Q EK+ Sbjct: 60 DTPQIRQAIKNQLIAHVLIQQAAEKAKYGGKPEVQAA----------------------- 96 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 Q + +K++ + + ++ E R ++ Sbjct: 97 -------MQVAKANAEAQLYLKDNIKPSPVTDAQVKARYDEIVGSLGKEEVKPRIIVVKD 149 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD------ 241 ++ +++ + G+ ++ Sbjct: 150 AATAATVLAQLKA-----------GQTFEALARQYSQAPTAGAGGELPWVSFKMPLVEGN 198 Query: 242 -----LHPQFQNLLKKSQNNTTNPYVTQKGV-EYIAICDKRD--LGGEIALKAYLSAQNT 293 L + T + G + I KR + ++ + Q Sbjct: 199 TQGLPLPVAQAMTKLPAGGVTADSIPLGNGARAIVKIDAKRPTQVPAYDTAQSTIRQQLQ 258 Query: 294 PTKIEKHEAEYVKKLRSNAIIH 315 EK AE V L +A I Sbjct: 259 ALAFEKATAELVGGLLKDAKIQ 280 >gi|329847914|ref|ZP_08262942.1| PPIC-type PPIASE domain protein [Asticcacaulis biprosthecum C19] gi|328842977|gb|EGF92546.1| PPIC-type PPIASE domain protein [Asticcacaulis biprosthecum C19] Length = 348 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 30/288 (10%), Positives = 70/288 (24%), Gaps = 49/288 (17%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------IAVQELIVETLKKQ 88 I+GE + D+ L+ ++E+I + L + Sbjct: 33 PPEPGDIAVAKIDGETVWASDVRAEAVAQGAIGPGEPLDPTSDMFARTLEEVIDQRLLAK 92 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 G+ Q + + +V Sbjct: 93 AARAKGLDKSVAAQRRL------------------------------QAAEDRILGDMLV 122 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 +N ++ ++Q + E R +L ++ + Sbjct: 123 ENTIDRDIDEKSIKEHYDEQVKLSKQSEEIRTRVILL----------KSKEEADNVMKAV 172 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGV 267 + + +E+ + S G Y + ++ + +T P + G Sbjct: 173 QGGSLFEAMAMERSIDQTTRFSGGDMGYFTTDIMPQAYKGVLSTAKIGDTVGPVQAEGGW 232 Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + D+R I A ++ LR A + Sbjct: 233 AILRVEDRRPEQL--PSLEEERPIIMRYLIYNQVAGLLESLRKGAKVE 278 >gi|320106474|ref|YP_004182064.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Terriglobus saanensis SP1PR4] gi|319924995|gb|ADV82070.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Terriglobus saanensis SP1PR4] Length = 275 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 18/180 (10%), Positives = 59/180 (32%), Gaps = 6/180 (3%) Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + + E+ ++ + + I ++ +++ Sbjct: 96 RDNLLIEKYSQWLTRHEMRPSREEVERYYEQHRVEFHQPERIEVAHIICNIDRPEDRAVA 155 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 Q +++ AE EK++ V ++ + +F + + +N Sbjct: 156 QSKMQQAEMELNTGKPFQKVAEKYSDCGGKV---PLGWITRGVMVEEFDEVVFTLKRNER 212 Query: 258 TNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + ++ G+ + + + G E +K ++ + + +K V + A+I Sbjct: 213 SEIFSSRFGLHIATVLNIKPAGYEPLQEVKLSIAKRMLEERRQKTVRLAVDEATRRAVIE 272 >gi|152980145|ref|YP_001353225.1| peptidyl-prolyl cis-trans isomerase [Janthinobacterium sp. Marseille] gi|151280222|gb|ABR88632.1| peptidyl-prolyl cis-trans isomerase [Janthinobacterium sp. Marseille] Length = 638 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 32/270 (11%), Positives = 78/270 (28%), Gaps = 19/270 (7%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQE-LIVETLKKQEIEKSGITFD----------SNT 101 D+ + +LL Q + + + ++++ LIV+ + + Sbjct: 130 KFDVERYKSLLAAQGMTPAMYEASLRQDLIVQQVNAAIQSTAFAPDSLAQRLSELGEQER 189 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 + A + + L N F +++ + + + + + Sbjct: 190 EVQYLTFKAADYASQVKVTDDMLKAYYDKSNEFSVPEQVKAEYVVLTADALASQINVSDA 249 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 +I + ++ + R I NK AE+ L K K Sbjct: 250 DIKSYYEQNAKQYGVDEQRRASHILIAANKDAPAAEKAAAKAKAEKLLETLRKSPQDFAK 309 Query: 222 FASKIH-----DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 A + G + + + F++ K Q ++ + G I + Sbjct: 310 LAKENSNDPGSAERGGDLDFFSKGMMVKPFEDAAFKLKQGELSDLVESDYGFHIIKVTAI 369 Query: 276 RDLGGE--IALKAYLSAQNTPTKIEKHEAE 303 + + +K ++ + K AE Sbjct: 370 KPATLKPLEQVKGDIANDIRKQLVTKKYAE 399 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--K 58 M + T ++ L + F + + SY S SS ++G+ IT + + Sbjct: 1 MFDFIRTH-QRLMQFLLLLVIFPSFALFGLESYTSMGDSSTTVAKVDGQAITQPEWDAAQ 59 Query: 59 RIALLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 R + + ++ E ++ + LI + + E +++ ++ T+ + Sbjct: 60 REQMERFRQMFGGQFDPKMFDTPEAKQDVLDGLIAQRVLAAEAKRNKLSVSDQTLQQTIM 119 Query: 108 QHA----RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 A + E + S L QG+ ++ L I V Sbjct: 120 GIAGLTTADGKFDVERYKSLLAAQGMTPAMYEASLRQDLIVQQV 163 Score = 37.3 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 21/256 (8%), Positives = 63/256 (24%), Gaps = 8/256 (3%) Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 L+++ G++ ++L+ + + + + A L E ++ Sbjct: 376 PLEQVKGDIANDIRKQLVTKKYAETADV---FSNTVYEQSDSLKSVADKLKLKIETVNNL 432 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + + + + + ++ K +E+ N + + + Sbjct: 433 SRQPNPAVAATAPFNSPKFLSALFSEDSLKNKRNTEAVEVAPNTLIAGRVVDYKPASKRP 492 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLP--KDCNKLEKFASKIHDVSIGKAQYLLESD 241 + + + +L K + F++ Sbjct: 493 FDEVKAQVRDRVIQTEALVLAKNAGEEKLAALKAKDDASGFSATQTVSRAKSQGVNPALF 552 Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-NTPTKIEKH 300 L + V +G + + K Q T ++ Sbjct: 553 LA--VMKADTSKLPSYVGVEVPGQGYGVLRVTRVVQPSNVDKAKRQAEQQQITAALAQEE 610 Query: 301 EAEYVKKLRSNAIIHY 316 Y+ L+ A + Sbjct: 611 MQAYLDVLKEKAKVKI 626 >gi|296329574|ref|ZP_06872060.1| hypothetical protein BSU6633_00635 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672771|ref|YP_003864442.1| putative secretion protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296153317|gb|EFG94180.1| hypothetical protein BSU6633_00635 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411014|gb|ADM36132.1| putative secretion protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 297 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 95/314 (30%), Gaps = 40/314 (12%) Query: 15 LLTTYFVLIIFCIVPIV-----SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 + T ++ C + + S + S TI G+ +T + K + Sbjct: 6 IWTIILGALLVCCISVAYTLTKSQAGASPSGESIATIGGKSVTREEWLKEM--------E 57 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 K ++++I + +Q +K+ + +N ++ F+ ED Sbjct: 58 DRYGKSTLEDMINVRVVEQLAKKNNLKVSNNEIDREFLLVKAVNNSFYED---------- 107 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 ++ ++ Q + +++ E+ + K K + + R + D Sbjct: 108 -EHTTEKEWKDQIRYNILLEELLTRDIDISNKELKSFYNKNKELYQFDDSYRIRHIVVKD 166 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL---HPQF 246 + + + + + E+ + G ++ E+ Sbjct: 167 EEEAREVLKE--------LKGGSSFEAVAAERSTDRYTSPYGGDLGFVTEASDNIPSAYI 218 Query: 247 QNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAE 303 + ++ + P G I + +K +K + Q ++ Sbjct: 219 EEAQTLKEDEWSDEPIKVSNGYAVIQLKEKLKARTFSYDEVKDQIRRQIAMDQLGDKAT- 277 Query: 304 YVKKLRSNAIIHYY 317 VK L A + ++ Sbjct: 278 -VKTLWKEADVSWF 290 >gi|206976548|ref|ZP_03237454.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus H3081.97] gi|206745231|gb|EDZ56632.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus H3081.97] Length = 288 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 88/306 (28%), Gaps = 46/306 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + L ++ + + + + S ++ T+ G+ IT D ++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSSDKVVTSKAGD-ITKEDFYTQMK--------QQYGK 51 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + +++E + + + D + F + L +QGI + Sbjct: 52 QVLNNMVMEKVLIKNYKVEDKDVDKKFD--------EMKKQYGDQFDTLLKQQGIKEETI 103 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 K + Q ++ K + + Sbjct: 104 KNGVRAQLAQEKAIEKTITDKELKDNYKPEIKASHILVKD-------------------- 143 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 + K +E + ++++ G + + +F+ K Sbjct: 144 ----EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEEAAYKL 199 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLR 309 ++ + P +Q G I + D ++ KA + + K + + + + K Sbjct: 200 KKDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKSQDGEFMNDLMMKEI 259 Query: 310 SNAIIH 315 A + Sbjct: 260 KKADVK 265 >gi|313672156|ref|YP_004050267.1| ppic-type peptidyl-prolyl cis-trans isomerase [Calditerrivibrio nitroreducens DSM 19672] gi|312938912|gb|ADR18104.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Calditerrivibrio nitroreducens DSM 19672] Length = 623 Score = 73.2 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 32/259 (12%), Positives = 80/259 (30%), Gaps = 11/259 (4%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 IT I + L + IA + + +E + + + Sbjct: 140 ITPETFENDIRVNLLLNKMKGV--IATSVYVNDQEILKEYRMRNKAVEISYIKVSPEDFE 197 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 ++ + + + + + + + ++ + E E+ + K Sbjct: 198 KDVKVDDKSLEKYYLENKNEFLEP---TKAKLKYVEFAPDNVKIDDNISEQELQSYYLKN 254 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIH 227 K ++ I+ I + Q+ V+K +K AEE + K ++++ I Sbjct: 255 KEQFKQDEQIKARHILIKIDNFQDNVSVEKALKKAEEIYKKAKSGAKFEELAKQYSDDIS 314 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK--RDLGGEIAL 284 + G ++ + +F++ L + + P T G I + + Sbjct: 315 KNNGGDLGFVKRGMMIKEFEDALFSLKEGEISKPVKTSFGYHIIKNEKYLPKKEYTFAEV 374 Query: 285 KAYLSAQNTPTKIEKHEAE 303 K + + KI + Sbjct: 375 KDQIRSTILKDKIMSQFKQ 393 Score = 37.3 bits (84), Expect = 3.0, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 85/313 (27%), Gaps = 24/313 (7%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI----- 60 LS F+ ++ F+ IF + + I+ V++ + Sbjct: 9 RKILSIFLWIVIASFIGTIFLVWGVG---GKGNQKTYALKIDDHVVSFNEYKTTYENISN 65 Query: 61 ---ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---NTG 114 L L K ++E+I + L E + + V + N Sbjct: 66 TYRQLFGANIDQKMLSKQVIEEIISKYLLLDEANRLKLPVTDAEVLAEIKKVPAFQVNGQ 125 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 + L I F+ + + + +K + EI + +N Sbjct: 126 FDKNRYLEVLRLNQITPETFENDIRVNLLLNK-MKGVIATSVYVNDQEILKEYRM-RNKA 183 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 V I+ + + ++K + + L K K +FA Sbjct: 184 VEISYIKVSPEDFEKDVKVDDKSLEKYYLENKNEFLEPTKAKLKYVEFAP--------DN 235 Query: 235 QYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 + ++ + Q+ K++ + I I + +D Sbjct: 236 VKIDDNISEQELQSYYLKNKEQFKQDEQIKARHILIKIDNFQDNVSVEKALKKAEEIYKK 295 Query: 295 TKIEKHEAEYVKK 307 K E K+ Sbjct: 296 AKSGAKFEELAKQ 308 Score = 36.2 bits (81), Expect = 6.7, Method: Composition-based stats. Identities = 23/263 (8%), Positives = 68/263 (25%), Gaps = 5/263 (1%) Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 I L K + E++ ++ + + Q + + + Sbjct: 358 IKNEKYLPKKEYTFAEVKDQIRSTILKDKIMSQFKQSVQAKYKEIQSFGNLSGYIVKNPK 417 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 S E + +G+ D + + + + D + + + + Sbjct: 418 SLEIKETDYISEGVRDTFIPEDIKNELLKLDKTELSSLYLINGKYYLFEIADKITPTVPP 477 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 E + V+ S + + + + K N + + + Sbjct: 478 LEKIKEKVIKSYVRKQASIIAKQKADEAAGKSNINEAAKFLNLAPQDVAAFKRIDPIPNI 537 Query: 236 YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNT 293 + + F ++ I + + + + ++ Sbjct: 538 GVNSTMTEAIFTTKAPAMVKSS---IQHGSSYYVIYVKNFLPASDDKLPEQRNTIAQYLI 594 Query: 294 PTKIEKHEAEYVKKLRSNAIIHY 316 K + Y++KL+ +A I Sbjct: 595 NLKQTEAYNSYIEKLKKDARIDI 617 >gi|163848606|ref|YP_001636650.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus aurantiacus J-10-fl] gi|222526541|ref|YP_002571012.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus sp. Y-400-fl] gi|163669895|gb|ABY36261.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus aurantiacus J-10-fl] gi|222450420|gb|ACM54686.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus sp. Y-400-fl] Length = 302 Score = 73.2 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 27/262 (10%), Positives = 62/262 (23%), Gaps = 52/262 (19%) Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 T + + + + +L + +++I L Q + GI D ++ Sbjct: 67 TREQVEQIV-------VENDLRRQIFEQMIQNELLLQYARQHGIGIDPAALDAEI----- 114 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 D Q L +V Sbjct: 115 -----------AARLPADADPAEVQDLRNVLAREQIVFAVIARNTRADMARA-------- 155 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVS 230 R +L + +Q + + + Sbjct: 156 ---------RHILVADEATAQATLAELQA-----------GADFATLAAQRSQDTGSAAN 195 Query: 231 IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 G + + PQF+ + NT T G + + ++ + + Sbjct: 196 GGDLGWTPRGEFVPQFEEAIFSLPLNTPQIVQTDFGFHIVEVLERESQRPFSSFDDLRTR 255 Query: 291 QNTPTKIEKHEAEYVKKLRSNA 312 +N ++ + ++LR A Sbjct: 256 RNASQFYQETFVPWYEELRRQA 277 >gi|57505879|ref|ZP_00371804.1| probable periplasmic protein Cj1289 [Campylobacter upsaliensis RM3195] gi|57015909|gb|EAL52698.1| probable periplasmic protein Cj1289 [Campylobacter upsaliensis RM3195] Length = 272 Score = 73.2 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 39/296 (13%), Positives = 93/296 (31%), Gaps = 32/296 (10%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 I+ ++ V+ + + + + + E IT+ DI + + LLKL + A+ LI Sbjct: 4 ILMILLFFVAIVNAKVLNSVALVVEKEPITNYDIEQTMKLLKL------PREQALAVLIN 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E ++ +I++ I + ++ + ++ E F + L +G F+ L Sbjct: 58 EKMELSQIKQFSIVVNELELDTAISKILTQNKMNLEQFKNSLKAKGQNYELFRHNLKKDL 117 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + + E + Y V +++ + + Sbjct: 118 EKRKLYEKIASMNKTDFSEESAKKFFEANKEKFLFYTSIDVKIYRSSDQVILEKMKTDKK 177 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 + + L L + + Sbjct: 178 IILKAQNVNLNPHNAD------------------------PRLLALLSQLKIGEFSPVLN 213 Query: 263 TQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +++G E + K ++ +K + + + + +Y KLRS I Y Sbjct: 214 SKEGFELYEVMAKSGANVPEFEQIKDSVMNVYFNEQRQNYIQDYFDKLRSKLNIEY 269 >gi|261880044|ref|ZP_06006471.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270333284|gb|EFA44070.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 474 Score = 73.2 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 28/300 (9%), Positives = 85/300 (28%), Gaps = 38/300 (12%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + + +S+ A + T+NG+ + + +G +++ Sbjct: 1 MKIKLLLGVTLMCGTLSFAQNA--DPVIMTVNGKPVPRSEFEYSYN---KNNTDGVIDRK 55 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 +V+E + + N L E + Sbjct: 56 SVKEYVDLFI--------------------------NYKLKVEAAKEAGLDTMLSFRQEF 89 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 Q I P ++ + +I Q+ + + +L + ++ Sbjct: 90 SGYRDQQIRPAMISEE---DVEAEARKIYRQTQQQVDQNGGMVHVAHILVMMKQQATPDE 146 Query: 196 GFVQK-RIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 K RI E+ + ++ + + G+ +++ +F+++ Sbjct: 147 NRKAKVRIDSVYEALKKGADFAALAKQVSQDPGSANNGGELPMIVKGQTLKEFEDVAWSL 206 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSN 311 + P+++ G + ++ + + + E+ + L Sbjct: 207 KDGEMSEPFMSPAGWHIVLKKGHQNFYSYDSQRDAIMKYIDQRGLREQIINAKLDTLSKQ 266 >gi|134094954|ref|YP_001100029.1| putative peptidyl-prolyl cis-trans isomerase protein [Herminiimonas arsenicoxydans] gi|133738857|emb|CAL61904.1| putative peptidyl-prolyl cis-trans isomerase D, ppiD-like [Herminiimonas arsenicoxydans] Length = 636 Score = 73.2 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 28/270 (10%), Positives = 73/270 (27%), Gaps = 19/270 (7%) Query: 53 DGDISKRIALLKLQ-----KINGELEKIAVQELIVETLKKQEI------EKSGITFDSNT 101 D+ + A+L Q L + + + ++ ++ + Sbjct: 130 KFDVERYKAILAAQGMTPTMYEARLRQELTSQQVNAAIQNTAFAPDSLAKRLSELGEQER 189 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 + + L N F +++ + + + + + Sbjct: 190 EVQQLAFKTSDYAGQVKVTDDMLKSYYEKSNQFNVPEQVKAEYVVLTADALAAQINVSDA 249 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 +I + ++ E R I NK + AE+ L K+ + K Sbjct: 250 DIKSYYEQNAKHYGVEEQRRASHILIGVNKDASDAEKAAAKAKAEQLLATLHKNPQEFAK 309 Query: 222 F-----ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 + G + + + F+ K Q ++ + G I + Sbjct: 310 LAKENSSDTGSAERGGDLGFFGKGMMVKPFEEAAFKLKQGELSDLVQSDYGFHIIKLTAI 369 Query: 276 RDLGGE--IALKAYLSAQNTPTKIEKHEAE 303 + + +K +++ + K E Sbjct: 370 KPASIKTLDEVKNEIASDIRKQLVAKKYTE 399 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 55/164 (33%), Gaps = 18/164 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--K 58 M + T ++ L +L F V + SY S +S + + IT + + Sbjct: 1 MFEFIRTH-RRLMQFLLLLIILPSFAFVGLESYTSMGDASNTVAKVADQTITQPEWDAAQ 59 Query: 59 RIALLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 R + + ++ E ++ + LI + + E +++ + + V Sbjct: 60 REQMSRFRQMFGDQFDAKMFDTPEAKQEILNNLIAQRVLTAEAKRNKLAVTDQALQQTIV 119 Query: 108 QH----ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + E + + L QG+ ++ L + V Sbjct: 120 NMGGLTTADGKFDVERYKAILAAQGMTPTMYEARLRQELTSQQV 163 >gi|45658751|ref|YP_002837.1| hypothetical protein LIC12922 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45601995|gb|AAS71474.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 362 Score = 73.2 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 42/319 (13%), Positives = 100/319 (31%), Gaps = 19/319 (5%) Query: 16 LTTYFVLIIFCIVPIV-SYKSWAMSSRIRTTINGEVITDGDISKR-------IALLKLQK 67 L F+ +F + + S + +R+ T+ I++ D+ LK + Sbjct: 26 LKNRFLTGMFVFLFFLRSTHAAESLNRVIATVGTVSISELDLDDATEKYNRLQKHLKHED 85 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG--LSAEDFSSFLD 125 + LI + E+ I + V+ + G + + Sbjct: 86 YRKSFRTRIIDFLIDRAIVDVVAEEESIQVNEQRVDSEIEKRMEVMGITNRKQFEKTMET 145 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 G+ + L Q +++ + E EI + + K+ E R + Sbjct: 146 SSGMPFELWVTELPYQIKKGQLLQLKIAV-PPPNEQEIRSWYNQNKDKVGFEIRYRIISI 204 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLH 243 + ++ +Q + + K + + +S L P + + G +++ DL+ Sbjct: 205 APENDSIQEENRLYKEVSEIRKSILADPSSFALIAGSPRNDPALRARRGMVEWISSFDLY 264 Query: 244 PQFQNLL----KKSQNNTTNPYVTQKG-VEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 + + + ++ + I KR L+ + K E Sbjct: 265 KYSKITATIAAPLPNGGVSEVFRDERKRYCILKIEGKRPTPM-ENLRGGIQNILYRDKEE 323 Query: 299 KHEAEYVKKLRSNAIIHYY 317 ++K+ R+ I + Sbjct: 324 DTFHRWLKESRAEIPIQIF 342 >gi|288929625|ref|ZP_06423469.1| peptidyl-prolyl cis-trans isomerase [Prevotella sp. oral taxon 317 str. F0108] gi|288329130|gb|EFC67717.1| peptidyl-prolyl cis-trans isomerase [Prevotella sp. oral taxon 317 str. F0108] Length = 474 Score = 73.2 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 25/293 (8%), Positives = 74/293 (25%), Gaps = 34/293 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 + + ++ + A TING ++ + + + ++ + Sbjct: 5 ALSVALMFCAFVAHAQDDPTIMTINGRPVSRSEFE-------YSYNKNNTDNVVDKKTVA 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + ++ K + + + + L + Sbjct: 58 QYVELFVNYKLKVEAALAARLDTTQAFRNEFADYRDQQVRPSFVNNDDVDKAARQLYDDT 117 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 ++ + +L + Q ++RI Sbjct: 118 KQR------------------------IEGQGGLIRVAHIMLLLPQKSAKDLQRRAEQRI 153 Query: 203 KDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260 + R K + G+ +L + +F++ + P Sbjct: 154 DSIYNALKRGADFAALARKLSDDKGSAQQGGELPWLQKGQTLKEFEDAAFALKPGEISKP 213 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP-TKIEKHEAEYVKKLRSNA 312 ++ G I + ++R ++KA + A E+ + +L + Sbjct: 214 LLSPAGYHIIKMIERRSFLPYDSVKADIFAYIEQTNMREQIIDNKLNELAKAS 266 >gi|153005189|ref|YP_001379514.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. Fw109-5] gi|152028762|gb|ABS26530.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. Fw109-5] Length = 342 Score = 73.2 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 31/300 (10%), Positives = 79/300 (26%), Gaps = 33/300 (11%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 + +V S + + + +G V+T D+ + + L Sbjct: 62 AVLLAALVLGCSSSDPADVVGRFDGGVVTAEDLHREASRLPPLLR--------------- 106 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 F++ V + L A + + + L + Sbjct: 107 -----------ARFETEAGRRDMVGAIVDKRLLAREARRRKLHEDPEIRRELEELEERLA 155 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNKLQNQGFVQKR 201 ++ + + + E+ A +R VL + ++ + Sbjct: 156 IQALLAAEEKARGSASDAELRAWYDSHGAELAQPERLRVRRVLAKVDPGASRSDRERARE 215 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP---QFQNLLKKSQNNTT 258 + RLR + + G + D + + + Sbjct: 216 RAERFAGRLRAGERFEAVAVSGDGPERARGGDLGLIGRGDGKDARLESAAFELPAVGARS 275 Query: 259 NPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G + + ++R + + +S + P K E + +LR +A + + Sbjct: 276 PVIELTDGFAVLELIERRPGRVPSFEEARGEVSNRLVPQLKRKAFDELLSRLRRDADVEF 335 >gi|305664741|ref|YP_003861028.1| putative exported peptidyl-prolyl cis-trans isomerase [Maribacter sp. HTCC2170] gi|88707863|gb|EAR00102.1| putative exported peptidyl-prolyl cis-trans isomerase [Maribacter sp. HTCC2170] Length = 483 Score = 73.2 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 29/283 (10%), Positives = 80/283 (28%), Gaps = 14/283 (4%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQEIEKSGITF 97 I + VI + DI K + LK Q + +L+ + L + + + Sbjct: 60 DGIAAVVGDYVILESDIEKTLIDLKSQGAMTEDITRCGLLGKLMEDRLYAHQAVQDSLLV 119 Query: 98 DSNT----VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + G A+ + + + + + +++ + Sbjct: 120 SDDEVSLTTERQIQSFVAQMGSMAKLLKFYKKENEASLREDINKINKLRMLSEKMQSSIV 179 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E+ K+ + + I + QK I + + Sbjct: 180 SEIEITPEEVRQFFNKIPEDERPVFGAEMEISQIVKQPKATEIEKQKVIDKLSAIKADVE 239 Query: 214 KDCNKLEK----FASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGV 267 + K ++ G ++ F+++ + + P+ T G Sbjct: 240 DNDAKFSVKAILYSQDPGSKSKGGFYSITKDTGFDKTFKDVAFSMQEGAVSEPFETMFGF 299 Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 I I R ++ ++ + + +++ + +R Sbjct: 300 HLIYIEKIRGQELDLRHI-LITPEISQESLDEA-KTELDSIRK 340 >gi|319787632|ref|YP_004147107.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudoxanthomonas suwonensis 11-1] gi|317466144|gb|ADV27876.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudoxanthomonas suwonensis 11-1] Length = 654 Score = 73.2 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 15/154 (9%), Positives = 46/154 (29%), Gaps = 4/154 (2%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + + E + + + K + A ++ + + Sbjct: 274 ERYEAEKQRFGDPERRLASHILVRVPEGGDAAAAEAKAKQLAGQAAAPGADFAALAREHS 333 Query: 224 SKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRD--LG 279 + G ++ + + F+ T+ P T+ G + + + + L Sbjct: 334 EDPGSRDTGGDLGWVEQGMMVEPFEQALFAMQAGETSGPVKTEFGWHVLQLREVQPGALK 393 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++ L+ + E+ +E + +L A Sbjct: 394 PFEEVREELAREQAQADRERAYSELLGRLTDLAY 427 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 21/255 (8%), Positives = 61/255 (23%), Gaps = 35/255 (13%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-------------- 46 M K+ S + + ++I F V SY ++ + Sbjct: 1 MLQKLRDRSSGWAATIIIALLMIPFLFVVDQSYLGGMGANN-VAQVKAPPSWWKGAPGFW 59 Query: 47 ------NGEVITDGDISKRIALLKLQKINGE-------------LEKIAVQELIVETLKK 87 E ++ D +R+ ++ + ++ + EL+ E + Sbjct: 60 PVSLLWEHEEVSVEDFRQRLEQARMLARQQQGEAFDPREFEGIENKRRILDELVDEKVML 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + G+ V + D +++ + + Sbjct: 120 LASARDGVVVSDAAVREYIASIPAFQVDGKFDQNAYQMALSSQFPPRTPRQFEDLVRTTL 179 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 ++ + G+ A ++ ++ + L + E Sbjct: 180 RQSLVPVGVGSSAFVTDAELDRLLRLSGETRDVELALMPEIAEDTTPVTDADAKAW-YEA 238 Query: 208 SRLRLPKDCNKLEKF 222 ++ Sbjct: 239 HTADFMSPEKVAIEY 253 >gi|229095647|ref|ZP_04226628.1| Foldase protein prsA 1 [Bacillus cereus Rock3-29] gi|229114599|ref|ZP_04244013.1| Foldase protein prsA 1 [Bacillus cereus Rock1-3] gi|228668664|gb|EEL24092.1| Foldase protein prsA 1 [Bacillus cereus Rock1-3] gi|228687779|gb|EEL41676.1| Foldase protein prsA 1 [Bacillus cereus Rock3-29] Length = 287 Score = 73.2 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 88/305 (28%), Gaps = 46/305 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S ++ T+ G+ IT D + + Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKVVTSKAGD-ITKEDFYNEMK--------QKAGSQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 +Q +++E + + + D + F + L +QG+ + FK Sbjct: 52 VLQGMVMEKVLIKNYKVDDKEVDKKLDETK--------KQVGDQFDTLLKQQGMKEETFK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 L Q ++ K + + Sbjct: 104 NMLRAQLAQEKAIEKTITDKELKENYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G + + +F++ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFEHGKMVKEFEDAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRS 310 ++ + P TQ G I + D ++ KA + + K++ + + K Sbjct: 200 KDEVSEPVKTQFGYHIIKVTDIKEPEKSFEQSKADIKKELIAKKMQDGAFMNDLMMKEIK 259 Query: 311 NAIIH 315 A + Sbjct: 260 KADVK 264 >gi|70730194|ref|YP_259933.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Pseudomonas fluorescens Pf-5] gi|68344493|gb|AAY92099.1| PPIC-type PPIASE domain protein [Pseudomonas fluorescens Pf-5] Length = 318 Score = 73.2 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 21/264 (7%), Positives = 75/264 (28%), Gaps = 8/264 (3%) Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 + +++A G +++A +EL E + + + + + Sbjct: 41 LQQQVASTPAVARLGN-QQVAAEELKRLFASLPEESRGQLRGNRPALEAWIRSRLAE-KA 98 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN--DFMLKYGNLEMEIPANKQKMKNI 173 E + +Q + Q ++ D +++ Y + A Sbjct: 99 VLEQADAQGWRQRPEVEQQTRAATEQIVFRDYLQSVSQVPADYPSPAELQQAYDSGKSAW 158 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIG 232 + +F + ++ + + +++ + +++ G Sbjct: 159 MTPPLYRVSQIFLGVAEPQAAEQVRRQAQELSRKAQAAPGEFAALAAQYSQDRDSAQRGG 218 Query: 233 KAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLS 289 + L + + + + G + + +++ L+ L+ Sbjct: 219 DSGLQPLQQLLPEVRSAVARLKVGGVSEVVQSAAGFHVLKLTEQQPARTASLDELRDRLT 278 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAI 313 + E+ Y++ + + A Sbjct: 279 QALRAQRQEQIAKAYLEGMLNTAT 302 >gi|170727449|ref|YP_001761475.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella woodyi ATCC 51908] gi|169812796|gb|ACA87380.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella woodyi ATCC 51908] Length = 619 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 23/252 (9%), Positives = 57/252 (22%), Gaps = 7/252 (2%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + I + + + + V L+ T + + Sbjct: 139 QAILR-QLGYQANSFRDMMRTDMTRRQLVASLVGSEFVLPSEADYLAGIQGQTRDIRYHV 197 Query: 109 HAR--NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + F + + ++ D + E Sbjct: 198 IDATPYIAQAVVSDEDARAFYDANLAQFMSPETLSLEYIELNAKDMANDVVVTDEEAQTY 257 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + K ++ R + + K + + + Sbjct: 258 YDENKQQYLKPEK-RLAAHILVNLGDDESAAKAKADAIYAKLQAGEEFAELAKTESEDTF 316 Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD--LGGEIA 283 G+ + + + P+F ++L S + T G I + D + Sbjct: 317 SGEQGGQLDWFEKGVMEPEFDDVLFSLSNGEYSAVVKTSFGYHIIKLLDLQPGAEAPFED 376 Query: 284 LKAYLSAQNTPT 295 +KA + AQ Sbjct: 377 VKAKILAQLKEK 388 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 25/238 (10%), Positives = 65/238 (27%), Gaps = 19/238 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ I V++ F + SY + + T+NGE I++ + + Sbjct: 1 MLEKIREGSQGVIAKSILVLVILSFAFTGVSSYLGSSTEAA-AATVNGEEISESALEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +++ ++ L+ E L Q + G+ + Sbjct: 60 QSERARLEQQLGEMFEALAADDSYLASVKQSVLERLVAEKLLDQSATELGLRVSDEQIRT 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + D + + + D+ + + E +P Sbjct: 120 AIMTEPAFQTDGKFDNDRYQAILRQLGYQANSF--RDMMRTDMTRRQLVASLVGSEFVLP 177 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + I + IR + Q + + + + ++ Sbjct: 178 SEADYLAGIQGQTRDIRYHVIDATPYIAQAVVSDEDARAFYDANLAQFMSPETLSLEY 235 >gi|160898739|ref|YP_001564321.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Delftia acidovorans SPH-1] gi|160364323|gb|ABX35936.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Delftia acidovorans SPH-1] Length = 261 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 87/300 (29%), Gaps = 48/300 (16%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQ 78 +L ++S + + S++ +NG+ + ++ ELE + Sbjct: 5 LLTSLVTAAVLSTAALSASAQNIAVVNGKAVPKARAEALKQQIEQSGRPVTPELEGQIKE 64 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 E+I + QE K + L Sbjct: 65 EVIAREIFMQEANKRSLANSEAYKQQ-------------------------------MEL 93 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 A Q+I + DF K + E A K + + + +++ + Sbjct: 94 ARQTILIRALFEDFQKKNPVTDAEAKAEYDKAVAANSGKEYKASHILVESEDRAKAIIAE 153 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN--LLKKSQN 255 K K E+ +K + G + + P+F + + Sbjct: 154 IKAGKKFEDI----------AKKESKDPGSGARGGDLDWANPGNYVPEFSEALIKLEKGG 203 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T P TQ G I + D R E+ + Q ++ A++ + LR A I Sbjct: 204 MTQEPVKTQFGYHIIRLDDARQA--ELPKFEEVKPQIVQQLQQQKLAQFQESLREKAKIQ 261 >gi|128297|sp|P23119|NIFM_AZOCH RecName: Full=Protein nifM gi|142394|gb|AAA22166.1| nifM [Azotobacter chroococcum] Length = 293 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 33/262 (12%), Positives = 85/262 (32%), Gaps = 10/262 (3%) Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 L +++ I Q+ I + + + + + N SAE Sbjct: 30 LSEEQLQQAERIIGRQKHIEDAVLRC--PDAAGVVIPASQIEEAWTQIANRYESAEALQQ 87 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM--LKYGNLEMEIPANKQKMKNITVREYLI 180 LD QG+ + LA + V+ + + ++ + + + Sbjct: 88 ALDAQGLERVGMRAMLARELKVQAVLDCICAGLPEISDTDVSLYYFNHAEQFKVPARHKA 147 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP--KDCNKLEKFASKIHDVSIGKAQYLL 238 R +L +I ++ +N + +A RLR + + K + + G ++ Sbjct: 148 RHILVTINEDFPENTREAARTRIEAILKRLRGKPERFAEQAAKHSECPTAMQGGLLGEVV 207 Query: 239 ESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPT 295 L+P+ + +Q + + G + + L + Sbjct: 208 PGTLYPELDACLFQMAQGQLSPVLESPIGFHVLFCESVSTARQLTLEEILPRLRDRLQLR 267 Query: 296 KIEKHEAEYVKK-LRSNAIIHY 316 + + ++ ++++ L+ NA + Sbjct: 268 QRKAYQRKWLESLLQQNATLEN 289 >gi|294827708|ref|NP_710856.2| hypothetical protein LA_0675 [Leptospira interrogans serovar Lai str. 56601] gi|293385551|gb|AAN47874.2| hypothetical protein LA_0675 [Leptospira interrogans serovar Lai str. 56601] Length = 344 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 42/319 (13%), Positives = 100/319 (31%), Gaps = 19/319 (5%) Query: 16 LTTYFVLIIFCIVPIV-SYKSWAMSSRIRTTINGEVITDGDISKR-------IALLKLQK 67 L F+ +F + + S + +R+ T+ I++ D+ LK + Sbjct: 8 LKNRFLTGMFVFLFFLRSTHAAESLNRVIATVGTVSISELDLDDATEKYNRLQKHLKHED 67 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG--LSAEDFSSFLD 125 + LI + E+ I + V+ + G + + Sbjct: 68 YRKSFRTRIIDFLIDRAIVDVVAEEESIQVNEQRVDSEIEKRMEVMGITNRKQFEKTMET 127 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 G+ + L Q +++ + E EI + + K+ E R + Sbjct: 128 SSGMPFELWVTELPYQIKKGQLLQLKIAV-PPPNEQEIRSWYNQNKDKVGFEIRYRIISI 186 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLH 243 + ++ +Q + + K + + +S L P + + G +++ DL+ Sbjct: 187 APENDSIQEENRLYKEVSEIRKSILADPSSFALIAGSPRNDPALRARRGMVEWISSFDLY 246 Query: 244 PQFQNLL----KKSQNNTTNPYVTQKG-VEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 + + + ++ + I KR L+ + K E Sbjct: 247 KYSKITATIAAPLPNGGVSEVFRDERKRYCILKIEGKRPTPM-ENLRGGIQNILYRDKEE 305 Query: 299 KHEAEYVKKLRSNAIIHYY 317 ++K+ R+ I + Sbjct: 306 DTFHRWLKESRAEIPIQIF 324 >gi|163938953|ref|YP_001643837.1| peptidylprolyl isomerase [Bacillus weihenstephanensis KBAB4] gi|163861150|gb|ABY42209.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus weihenstephanensis KBAB4] Length = 289 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 92/304 (30%), Gaps = 42/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + ++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYNQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + + +QG+ + K Sbjct: 52 VLNNMVMEKVLIKNYKVDEKEVDKKFD--------EMKKQVGDQFDTLMKQQGLKEETVK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + ++ K + E + K +I V++ Sbjct: 104 NGVRASLAQEQAIEKAITDKDLKAKFEDYKQEIKASHILVKD------------------ 145 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKS 253 ++ K +E + +K++ G + + +F + K Sbjct: 146 ---EETAKKVKEELAQGKSFEELAKKYSEDPGSKEKGGDLGFFGPDKMVKEFDEAARKLK 202 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRSN 311 ++ + P TQ G I + + KA + + K + + + + K Sbjct: 203 KDEVSEPVKTQHGYHIIKVTETHADATFDKAKADIKKEAVQEKTQDAQFMNDLMMKEIKK 262 Query: 312 AIIH 315 A + Sbjct: 263 ADVK 266 >gi|288924571|ref|ZP_06418508.1| peptidyl-prolyl cis-trans isomerase, PPIC [Prevotella buccae D17] gi|288338358|gb|EFC76707.1| peptidyl-prolyl cis-trans isomerase, PPIC [Prevotella buccae D17] Length = 457 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 29/257 (11%), Positives = 71/257 (27%), Gaps = 15/257 (5%) Query: 47 NGEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 E I D+ + L + +G+ + +++ V+ L + I + V Sbjct: 39 GDEPILKSDVEVMRLQGLAEGITFSGDPDCSIPEQIAVQKLFLHQAAIDSIEVSESEVAQ 98 Query: 105 FFVQHAR---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 S E + + + ++ + Sbjct: 99 GIEGQINSWIQMTGSREKLEEYRKQSITQMRQQMHDDYRNRLLIQKMRMKLVEDVKVSPA 158 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 ++ A + M ++ + + +Q + + + R+ K Sbjct: 159 QVRAYFRDMPADSLPFVPTEVEVEILTSQPKISQEEINRVKDELRNYTDRVNKGETTFST 218 Query: 222 FASKIHDVSI-----GKAQYLLESDLHPQFQNLLKKSQN--NTTNPYVTQKGVEYIAICD 274 A + G+ Y L P F N+ + + ++ G I + D Sbjct: 219 LARLYSEDPGTARMGGELDYTGRGMLDPAFANVAFNLTDPKKISKIVESEFGYHIIQLID 278 Query: 275 KRDLGGEIALKAYLSAQ 291 KR G+ ++ + Sbjct: 279 KR---GDKIKVRHILRK 292 >gi|228908084|ref|ZP_04071932.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 200] gi|228851502|gb|EEM96308.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 200] Length = 293 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 88/309 (28%), Gaps = 50/309 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 L + +++ + S + T + +T+ ++SK L+ Q L Sbjct: 11 LKKKKIFIGTIISCMMLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQQYGESTLY 65 Query: 74 KIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + + L+ + E K + + + F GL ED Sbjct: 66 QMMLSKALLDKYKVSDEEAKKKVEEAKDKMGENFKSTLEQLGLKNED------------- 112 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K+ + + + +K K + + Sbjct: 113 ELKEKMKPEIAFEKAIKATVTDKDVKDNYKPEMKVSHILVKD------------------ 154 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ +E ++++ G+ +F+ Sbjct: 155 ------EKTAKEIKEKVNNGEDFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAY 208 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306 K + P T G I + DK++L +K + +++ ++ V Sbjct: 209 KLDAGQLSEPVKTTYGYHIIKVTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVN 268 Query: 307 KLRSNAIIH 315 L +A I Sbjct: 269 DLLKDADIK 277 >gi|301154695|emb|CBW14158.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Haemophilus parainfluenzae T3T1] Length = 625 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 45/394 (11%), Positives = 94/394 (23%), Gaps = 84/394 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ FI + + F I + Y S +NGE I+ D R Sbjct: 2 LIEKMHGVAHSFIGKAIFALLPVSFLIGGMSGYLYGGNESF-AAKVNGETISQQDFLNRY 60 Query: 61 ALLKLQKINGE----------------LEKIAVQELIVETLK------------------ 86 + E L + +Q L+ + L Sbjct: 61 NQEFEARAQQEGESFLAKTDSVEFVTALRQNLIQRLVDQELIRQYAKELKLGVSDDMIKR 120 Query: 87 ------------KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 K + + N + L+ E + L Sbjct: 121 AIVSDPNLQSNGKFDNARYQQLLTQNGLTSDTYAAILRNALTLEQMQNGLADSEFVVPAQ 180 Query: 135 KQYLAIQSIWPDVVK------NDFMLKYGNLEMEIPANKQKMKNI--------------- 173 + A + + D + K E EI A Sbjct: 181 VKDSAQTFFQKRIARLATLPLADEVAKQKVTEEEIKAYYDANAKSLVQPEQAKVQYIRVS 240 Query: 174 -------------TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + +Y I Q +K + + + Sbjct: 241 ANELGKLQPVTETQIAQYYQENKAQFISQKLAHIQLATEKEADAVYQELQKGADFAELAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDL 278 + K+ G+ ++ +++L F++ + + P I + D+++ Sbjct: 301 AKSVDKLSGAQGGELGWVKDNELPKNFEDAALLLNVGQYSTPVNVDGAYHIILVQDRKER 360 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + +K ++ K +R+ A Sbjct: 361 TLDE-VKEQIADSVRKNLAGSRFQAVEKAVRAKA 393 >gi|188578367|ref|YP_001915296.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188522819|gb|ACD60764.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 675 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 14/147 (9%), Positives = 46/147 (31%), Gaps = 4/147 (2%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++K + + + L +L S + + K K A E++ + Sbjct: 293 KRYEEEKARFVEPDQRLASHILISAGSDAAAQKAAEAKAAKLAAEAKAPGADFAALAKAN 352 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + + G ++ + + F++ + P ++ G I + + + G Sbjct: 353 SQDPGSKDAGGDLGWVEKGTMVKPFEDALFSMKAGDVVGPIKSEFGYHVIQLREVKGGQG 412 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + + +++ + Sbjct: 413 KS--FEQVRDKLAAEQLKADADKAFAD 437 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 24/236 (10%), Positives = 58/236 (24%), Gaps = 34/236 (14%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI----N--------- 47 M K+ S +I ++I F V SY ++ + N Sbjct: 20 MLQKLRDKTSGWIATAILGLLMIPFLFVIDNSYLGGIGANN-VAKVQAPPNWWKSAPSWW 78 Query: 48 -------GEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++Q+ + E + +L+ E + + Sbjct: 79 PVSLLWQHHEISTQDFRARFEQARMQERQRQGENFDPRTFESRENKLQVLDQLVDEQVVR 138 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E +GI +V + + G + + Sbjct: 139 LGAEDAGIVIGDASVRDYIANIQAFQVDGKFSPDKYRAALAQGTPPRTPAQFDALVRDSL 198 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++ + + +++ + + + P Q + Sbjct: 199 QQSVIPQAIADSGFATKSEFERLLKLMGETRDVELAMLPPPAMDTALVSDAQIKQW 254 >gi|312880257|ref|ZP_07740057.1| conserved hypothetical protein [Aminomonas paucivorans DSM 12260] gi|310783548|gb|EFQ23946.1| conserved hypothetical protein [Aminomonas paucivorans DSM 12260] Length = 344 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 35/329 (10%), Positives = 94/329 (28%), Gaps = 25/329 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVS---YKSWAMSSRIRTTINGEVITDGDISK 58 + T++ + + FV+ F + S + M G+ I + K Sbjct: 3 MKYLRTNVRWIMITVVALFVVSCFAGYGMYSRGQGQGGGMRDYAVAEAGGKKIMRSSLEK 62 Query: 59 RIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 + + Q N + L K + ++V +E+E IT + V + Sbjct: 63 GMQEMAEQFGNQQITSADLPLLRKAVLDNIVVSEQLLREVENQKITVGDDEVATALKRIQ 122 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-FMLKYGNLEMEIPANKQK 169 + E + +L + + + K L Q +++ ++ + K Sbjct: 123 DQF-PTKEAYMQYLQRSNLSEKDVKARLREQIAQQKLMEKVSAGASVDIVDARKLYDAMK 181 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 V+ ++ + + ++ D ++ + Sbjct: 182 DMMFRRPMGYTVNVVTFRSESVAKEARQKLLAGEKWDDVLKACSGDIGNSTPYSKPV--- 238 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG---GEIALKA 286 ++ + +L Q + T +A+ ++ + Sbjct: 239 ------FIPDRELASDLQVIRTLGIGKLTPLVRITSDDILLAVKRTKEAERVLPFAEVSG 292 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + K + + Y ++L+ A + Sbjct: 293 DIEQTLLAQKKRELQGAYFEELKKKAGVK 321 >gi|229171802|ref|ZP_04299374.1| Foldase protein prsA 1 [Bacillus cereus MM3] gi|228611699|gb|EEK68949.1| Foldase protein prsA 1 [Bacillus cereus MM3] Length = 289 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 91/306 (29%), Gaps = 45/306 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + L ++ + + + + S +I T+ G+ IT + +++ N + K Sbjct: 1 MKKAMLALAATSVIALSACGTGSSSDKIVTSKAGD-ITKEEFYEQMK-------NSQTGK 52 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + +++E + + + D + F + L +QG+ + Sbjct: 53 QTLNNMVMEKVLIKNYKVDDKEVDKKFD--------EMKKQVGDQFDTLLKQQGLKEETV 104 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 K + Q ++ K + + Sbjct: 105 KNGVRAQLAQEKAIEKTITDKELKDNYKPEIKASHILVKD-------------------- 144 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 + K +E + ++++ G + + +F++ K Sbjct: 145 ----EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGAGKMVKEFEDAAYKL 200 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLR 309 ++ + P +Q G I + D ++ KA + + K + + + + K Sbjct: 201 KKDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKAQDGEFMNDLMMKEI 260 Query: 310 SNAIIH 315 A + Sbjct: 261 KKADVK 266 >gi|87310508|ref|ZP_01092637.1| probable peptidyl-prolyl cis-trans isomerase [Blastopirellula marina DSM 3645] gi|87286729|gb|EAQ78634.1| probable peptidyl-prolyl cis-trans isomerase [Blastopirellula marina DSM 3645] Length = 620 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 26/292 (8%), Positives = 71/292 (24%), Gaps = 26/292 (8%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQ 88 + + A + +N E IT ++ + A ++ +I + L + Sbjct: 49 GVAPQGNSAPQIKTVAVVNREPITRDELGREAAR--------RFGDEVLESVINKHLIAE 100 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 E K GI ++ A+ GLS + + L + +WP + Sbjct: 101 ECHKRGIQITQTEIDAEIEASAKKFGLSVDRWLGLLKDERNVSPA---QYRSDIVWPTMA 157 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + E + + + R + + ++ ++ A Sbjct: 158 LRRLAADRLEVTQEEFSKAW--QTEFGPKVKCRMI-------SVSDRALAEELRAKAAAD 208 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVE 268 + + + + + + Sbjct: 209 PDVFADMAKDFSEDPNSAAARGLIPPIRMNMGT-PEVESLVFALKDGEVSQVLFIAGQYL 267 Query: 269 YIAICDKRDLGGEIALKA-YLSAQ----NTPTKIEKHEAEYVKKLRSNAIIH 315 +K + + K+ + ++L+ A + Sbjct: 268 IFKCESHLPPTEVDPMKQPEIQNRMVEAIREQKLRSSAGDVYEELQEKAQVE 319 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 25/288 (8%), Positives = 71/288 (24%), Gaps = 18/288 (6%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 + + T+NG+ I ++ + + LE + L+ + LK + +E + Sbjct: 326 AKRQQNPGVVATLNGQQIMLDELQEEC---ITRHGIDVLEGEINRRLLQQALKSKNLEVT 382 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + S + + + + Y+ +K Sbjct: 383 EQDLNDEISRAADSYGFLKEDGSPDYEAWLEEVTQEQSVTVEVYVRDAVWPTVALKKLVS 442 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 K E +I + + + + + D Sbjct: 443 DKVIVSEEDIQKGFEANYGE-----------RVQVLAIVLDNQRRAQEVWDMARKNPSEQ 491 Query: 214 KDCNKLEKFASKI-HDVSIGKAQYLLE-SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIA 271 +++ + + G+ + + + ++ + + Sbjct: 492 FFGELARQYSIEPVSKNNDGQVPPIRRNGGQPKLEEEAFRLQPGELSSIVNIGRQSLILK 551 Query: 272 ICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + ++ L KI A+ L+ A I + Sbjct: 552 AMGRTKPTITDVNDVRDELVKDIHEKKIRLEMAKQFDALKEEAQIDNF 599 >gi|288941155|ref|YP_003443395.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Allochromatium vinosum DSM 180] gi|288896527|gb|ADC62363.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Allochromatium vinosum DSM 180] Length = 645 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 92/324 (28%), Gaps = 27/324 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + +I + I F + I SY I T+NG I ++ +R+ Sbjct: 1 MLQTIRERAQGWIAWAIVILISIPFALWGIQSYLGVGGE-PIAATVNGVEIPARELDRRV 59 Query: 61 ALLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + L ++ LI E L + + G+ V Sbjct: 60 QETRFELRERLGAAYDPAAFDDQRLRAEVLETLIQEALLMDVVGRLGLRVSDQEVQMQIL 119 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + + L QG+ ++ L + +++ + E+ Sbjct: 120 SDPAFVSEGRFDKDTYERLLRFQGLTPAMYEAQLRQKMSATQLIRA-----VSSSELATR 174 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 A K + ++ I + + +++ + + +R R + Sbjct: 175 AELDTYKRLMGQKREISYLRLPLAEHRTDEPIDEARITAYYDSNRARFQSPEQVRLDYLV 234 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 D K + E DL + + + P + + + D A+ Sbjct: 235 LDTDALSSKV-EVSEEDLRQLYASDQAR----FAQPERREVRHLLLKVDADADEAAARAV 289 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKL 308 + A + + E K L Sbjct: 290 LDEIQAIRARIQAGESFEELAKTL 313 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 26/265 (9%), Positives = 67/265 (25%), Gaps = 13/265 (4%) Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 L + + ++ EL G + + + +H + + Sbjct: 150 EAQLRQKMSATQLIRAVSSSELATRAELDTYKRLMGQKREISYLRLPLAEHRTDEPIDEA 209 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 +++ D +Q + + + K E ++ + + Sbjct: 210 RITAYYDSNRARFQSPEQVRLDYLV---LDTDALSSKVEVSEEDLRQLYASDQARFAQPE 266 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKI-HDVSIGKA 234 + + ++ + + + + R R + + G Sbjct: 267 RREVRHLLLKVDADADEAAARAVLDEIQAIRARIQAGESFEELAKTLSQDPGSAAKGGSL 326 Query: 235 QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQ 291 + + P F + P T G I + ++ L A+ Sbjct: 327 GVIESGIMVPAFDQAAFALKTGELSEPVRTPFGYHLIEVVQILPSKAKPFEDVREPLRAE 386 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHY 316 + E E ++L A I Y Sbjct: 387 LAKQRAEGLFYELAERL---ANISY 408 >gi|226942334|ref|YP_002797407.1| nitrogen fixation cis-trans peptidyl prolyl isomerase, NifM [Azotobacter vinelandii DJ] gi|226717261|gb|ACO76432.1| Nitrogen fixation cis-trans peptidyl prolyl isomerase, NifM [Azotobacter vinelandii DJ] Length = 293 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 29/262 (11%), Positives = 83/262 (31%), Gaps = 10/262 (3%) Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 L +++ I Q I + + + + + H + S E Sbjct: 30 LSEEQLQQADRIIGRQRHIEDAVLR--SPDAIGVVIPPSQLEEAWAHIASRYESPEALQQ 87 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM--LKYGNLEMEIPANKQKMKNITVREYLI 180 LD Q + + LA + V+ + + ++ + + ++ Sbjct: 88 ALDAQALDAAGMRAMLARELRVEAVLDCVCAGLPEISDTDVSLYYFNHAEQFKVPAQHKA 147 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP--KDCNKLEKFASKIHDVSIGKAQYLL 238 R +L +I ++ +N + + RLR + + K + + G ++ Sbjct: 148 RHILVTINEDFPENTREAARTRIETILKRLRGKPERFAEQAMKHSECPTAMQGGLLGEVV 207 Query: 239 ESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPT 295 L+P+ + ++ + + G + + L + Sbjct: 208 PGTLYPELDACLFQMARGELSPVLESPIGFHVLYCESVSPARQLTLEEILPRLRDRLQLR 267 Query: 296 KIEKHEAEYVKK-LRSNAIIHY 316 + + ++ ++++ L+ NA + Sbjct: 268 QRKAYQRKWLESLLQQNATLEN 289 >gi|310820639|ref|YP_003952997.1| peptidylprolyl cis-trans isomerase [Stigmatella aurantiaca DW4/3-1] gi|309393711|gb|ADO71170.1| Peptidylprolyl cis-trans isomerase [Stigmatella aurantiaca DW4/3-1] Length = 519 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 27/318 (8%), Positives = 69/318 (21%), Gaps = 68/318 (21%) Query: 47 NGEVITDGD-----------ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 NG+ I D + R + L + +L+ L Q E+ GI Sbjct: 46 NGKEIPLRDFSRVYAGQLNSLRNRGVPIPESYARQSLPSQVMDQLVTRELLSQAAERHGI 105 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP---DVVKNDF 152 + + ++A +F + + + + Sbjct: 106 NPSDDELRKLIHENADFHKDGQFNFEQYKRALRDYYRTTEPKYEEELRRQLAAQKMLQVV 165 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK------------ 200 + E+ A +K N + +++ Sbjct: 166 NSGAVVSDDEVRARYEKDANQAKVVFARFLPTMYAAQVPAPTPAQLEEFRKAHNDEISTY 225 Query: 201 --------------------------------------RIKDAEESRLRLPKDCNKLEKF 222 +E + Sbjct: 226 YESNRFMYQQAERAKARQILVKLAPDAAAQQKAEAKSRAEALHKEVTEGGKDFATVARER 285 Query: 223 ASKI-HDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + S G ++ + L + + + N + P T+ G + + +K+ Sbjct: 286 SEDPGTKASGGDLGWVERASLEPTLAEAVFALAPNGVSQPIETKLGWHVVKVEEKQAAQD 345 Query: 281 E--IALKAYLSAQNTPTK 296 + ++ + Sbjct: 346 KKLEEAAPEIATTLYKQQ 363 >gi|313105527|ref|ZP_07791795.1| putative peptidyl-prolyl cis-trans isomerase, PpiC [Pseudomonas aeruginosa 39016] gi|310878297|gb|EFQ36891.1| putative peptidyl-prolyl cis-trans isomerase, PpiC [Pseudomonas aeruginosa 39016] Length = 247 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 28/229 (12%), Positives = 56/229 (24%), Gaps = 14/229 (6%) Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + + R + + I + +V ++ Sbjct: 6 RVQLSENRDALERWMRARLAEKALYEQASAQDWQQRPQV--KTLIDAAARQIVLRTYLES 63 Query: 156 YG------NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + E+ A Q K L R I + +KR ++ Sbjct: 64 VSTVPEDYPSDAELQAAYQANKAQLAVPALYRVSQIFIAASAAGGLAEARKRAQELYRQA 123 Query: 210 LRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD--LHPQFQNLLKKSQNNTTNPYVTQKG 266 K + + G LL L L + + P G Sbjct: 124 ADG-DFAELARKHSDDPQTARNGGDIGGLLAQAQLLPAIRPALERLKVGAVSEPIQGANG 182 Query: 267 VEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + ++RD ++ L + E+ Y+ L +NA Sbjct: 183 FHLVKLTERRDARLATLDEVRGRLRESLRAQRQEQIAKAYLDGLVNNAT 231 >gi|226355966|ref|YP_002785706.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus deserti VCD115] gi|226317956|gb|ACO45952.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase precursor [Deinococcus deserti VCD115] Length = 338 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 32/291 (10%), Positives = 78/291 (26%), Gaps = 18/291 (6%) Query: 35 SWAMSSRIRTTINGEVITDGDISK--RIALLKLQKINGELEKIA----VQELIVETLKKQ 88 S A S + I EVIT + ++ R A+ ++ G + + + E LK+ Sbjct: 41 SAAQDSAVVGRIGQEVITLAEFNRAFRQAVARVLNSQGVPFEESYMAEFNDARGEFLKQY 100 Query: 89 EIEKSGITF---DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 +++ + + E + F D + L + Sbjct: 101 LRDRAVYQLARGSVKADAAEIDKQVADARADFESDAEFADALSGTGYASEADLRAD-LER 159 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 ++ ++ + A N+ ++ + + Sbjct: 160 QLIVGTYLRSIQSRFKFGDAVVAGNYNLNRTSFMRQREACARHILVKSQAEAQA-----V 214 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQ 264 + + G E D+ F NT ++ Sbjct: 215 VKELQAGGDFAKIATSKSQDPGSAAQGGDLGCFGEGDMVATFDKASFTGPLNTPQIVQSE 274 Query: 265 KGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 G + + + + G + Q T +K+ + K+++ + Sbjct: 275 FGWHVVLVSKRTEAGMVPLAEAAPVIREQLTREAAQKYLNSQIAKMKTESF 325 >gi|260683172|ref|YP_003214457.1| putative peptidyl-prolyl isomerase [Clostridium difficile CD196] gi|260686770|ref|YP_003217903.1| putative peptidyl-prolyl isomerase [Clostridium difficile R20291] gi|260209335|emb|CBA62746.1| putative peptidyl-prolyl isomerase [Clostridium difficile CD196] gi|260212786|emb|CBE03939.1| putative peptidyl-prolyl isomerase [Clostridium difficile R20291] Length = 310 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 43/301 (14%), Positives = 97/301 (32%), Gaps = 31/301 (10%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 ++ +N IT K A+L + ++ EL KK + + Sbjct: 13 NKSLAKVNDVEITKEQYKKTKAVLSATNNY--INGQSLDELEKTLDKKGRNKLENVIISF 70 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-------- 151 N Q A++ GL+ Q + D + + V + Sbjct: 71 MVDNELLYQEAKDKGLTPSKSEVDSKYQELEDKMNLNTSYKEKMDKAGVDKEYLKQEISR 130 Query: 152 ----------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN------Q 195 F + + ++ A K E + + + +K + + Sbjct: 131 DLAIDKNKKAFEDRINISDNDMEAYYTSHKKDFNVEEVSASQILISTLDKNKKEVSKDKK 190 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF-QNLLKKS 253 ++K+ + + +K++ + G+ Y + D + +F + + K Sbjct: 191 EALKKKADNILTKIKNGESFESLAKKYSDDKATGKNGGQLGYFTKDDKNAEFTKEVFKLK 250 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +N +N + T G + + DKR+ + + + + E++KKL +A Sbjct: 251 KNEVSNVFETSYGYHIVKVTDKRER---QKSFNECQSLIRESILNEKYIEHIKKLNEDAK 307 Query: 314 I 314 I Sbjct: 308 I 308 >gi|324325142|gb|ADY20402.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 288 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 88/306 (28%), Gaps = 46/306 (15%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + L ++ + + + A S ++ T+ G+ IT D ++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTGASSDKVVTSKAGD-ITKEDFYTQMK--------QQYGK 51 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + +++E + + + D + F + L +QGI + Sbjct: 52 QVLNNMVMEKVLIKNYKVEDKDVDKKFD--------EMKKQYGDQFDTLLKQQGIKEETI 103 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 K + Q ++ K + + Sbjct: 104 KNGVRAQLAQEKAIEKTITDKELKDNYKPEIKASHILVKD-------------------- 143 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 + K +E + ++++ G + + +F+ K Sbjct: 144 ----EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEEAAYKL 199 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLR 309 ++ + P +Q G I + D ++ KA + + K + + + + K Sbjct: 200 KKDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKAQDGEFMNDLMMKEI 259 Query: 310 SNAIIH 315 A + Sbjct: 260 KKADVK 265 >gi|253996686|ref|YP_003048750.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylotenera mobilis JLW8] gi|253983365|gb|ACT48223.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylotenera mobilis JLW8] Length = 632 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 32/256 (12%), Positives = 68/256 (26%), Gaps = 14/256 (5%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + R LL Q +G + + + K +K +T + Sbjct: 147 KFEAEIRATLLAQQAQDGIAKLGFISTARADKTLKLLNQKRVVTVSELKTKDYLD----Q 202 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 +S E+ ++ DK +Q + + + + + E+ + Sbjct: 203 VKVSPEEVKAYYDKHKDKLRDPEQVKIEFLL---LSASSLVPGIKVDDAEVKRYYDENSA 259 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH----- 227 R I Q+ A+ + K+ E+ A K Sbjct: 260 KFKGNEQRRASHILIGFGVNATPEQKQEAKNKAQALLDTIKKNPKSFEELAIKNSQDPGS 319 Query: 228 DVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALK 285 G + F+ K N ++ ++ G I + + +LK Sbjct: 320 ATKGGDLGSFGRGAMVKPFEEAAFKMKVNEVSDLVESEFGYHIIKVTEITGQGSDFESLK 379 Query: 286 AYLSAQNTPTKIEKHE 301 A + K + Sbjct: 380 AQIKGDLIFQKAQAEF 395 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 53/151 (35%), Gaps = 11/151 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + ++ F+ + F + I SY S A ++ ++G I+ + + Sbjct: 1 MLDGIRSVAKGWVGKAILAFITVPFALFGIDSYLSQAGNNAAIAKVDGSEISVQAYANAM 60 Query: 61 ALLK-----------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 L+ Q N E++ + + +LI E L ++EI+++ + + Sbjct: 61 QNLRSRMQAEGKADQAQLDNPEVKAMVLDQLINEQLLEKEIQRANYKISDAQLATYITAM 120 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + K++ A Sbjct: 121 PSFQKDGKFSQELYDELLQQNRYTPKKFEAE 151 >gi|228921035|ref|ZP_04084370.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838581|gb|EEM83887.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 293 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 88/309 (28%), Gaps = 50/309 (16%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELE 73 L + +++ + S + T + +T+ ++SK L+ Q L Sbjct: 11 LKKKKIFIGTIISCMMLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQQYGESTLY 65 Query: 74 KIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + + L+ + E K + + + F GL ED Sbjct: 66 QMMLSKALLDKYKVSDEEAKKKVEEAKDKMGENFKSTLEQLGLKNED------------- 112 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K+ + + + +K K + + Sbjct: 113 ELKEKMKPEIAFEKAIKATVTDKDVKDNYKPEMKVSHILVKD------------------ 154 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 +K K+ +E ++++ G+ +F+ Sbjct: 155 ------EKTAKEIKEKVNNGEDFAALAKQYSEDTGSKEQGGEISSFAPGQTVKEFEEAAY 208 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306 K + P T G I + DK++L +K + +++ ++ V Sbjct: 209 KLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVN 268 Query: 307 KLRSNAIIH 315 L +A I Sbjct: 269 DLLKDADIK 277 >gi|228984228|ref|ZP_04144410.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775515|gb|EEM23899.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 287 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 90/305 (29%), Gaps = 46/305 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + +++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKDEFYEQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QG+ + FK Sbjct: 52 VLNNMVMEKVLIKNYKVEDKEVDKRFDETK--------KQVGDQFDTLLKQQGMKEETFK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 L Q ++ K + + Sbjct: 104 NMLRAQLAQEKAIEKTITDKELKDNYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G + + +F++ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEDAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 ++ + P +Q G I + D ++ KA + + K + + + + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKAQDGEFMNDLMMKEIK 259 Query: 311 NAIIH 315 A + Sbjct: 260 KADVK 264 >gi|49480150|ref|YP_035301.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331706|gb|AAT62352.1| protein export protein prsA [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 287 Score = 73.2 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 89/305 (29%), Gaps = 46/305 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + +++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKDEFYEQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKEVDKKYD--------EMKKQYGDQFDTLLKQQGIKEETLK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q ++ K + + Sbjct: 104 TGVRAQLAQEKAIEKTITDKELKDNYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G + + +F++ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGAGKMVKEFEDAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 ++ + P +Q G I + D ++ KA + + K + + + + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKELVAKKAQDGEFMNDLMMKEIK 259 Query: 311 NAIIH 315 A + Sbjct: 260 KADVK 264 >gi|325920988|ref|ZP_08182874.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas gardneri ATCC 19865] gi|325548522|gb|EGD19490.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas gardneri ATCC 19865] Length = 656 Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 24/244 (9%), Positives = 72/244 (29%), Gaps = 8/244 (3%) Query: 70 GELEKIAVQELIVETLK----KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 L++ + + I E+ + E + + A +T ++ Sbjct: 177 DSLQQSVIPQAIAESGFATKAEFERLLKLMGETRDVELAMLPPPAADTAPVSDAQIKQWY 236 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 D + + I+ + + K + ++K + + + L +L Sbjct: 237 DGHAQDFRQPETVTIEYVEINAAKLQPATAADEATLRKRYEEEKGRFVEPDQRLTSHILI 296 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHP 244 S + + K K A E++ + + + G ++ + + Sbjct: 297 SAGSDPAAQKAAEAKAAKLAAEAKQPGADFAALAKANSQDPGSKGAGGDLGWVEKGTMVK 356 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 F++ + P ++ G I + + + G+ + Q +++ + Sbjct: 357 PFEDALFAMKAGDVVGPIKSEFGYHVIQLREVKGGQGKS--FEQVRDQLAAEQLKADADK 414 Query: 304 YVKK 307 Sbjct: 415 AFAD 418 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/192 (10%), Positives = 46/192 (23%), Gaps = 34/192 (17%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-------------- 46 M K+ S +I ++I F V SY ++ + Sbjct: 1 MLQKLRDKTSGWIATAILGLLMIPFLFVIDNSYLGGIGANN-VAKVQAPPTWWKSAPSWW 59 Query: 47 ------NGEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++Q+ + + + +L+ E + + Sbjct: 60 PVSLLWQHHEISTQDFRARFEQARMQERQRQGDNFDPRTFESRENKLQVLDQLVDEQVVR 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E +GI TV + + G + + Sbjct: 120 LGAEDAGIVIGDATVRDYITGIQAFQVDGKFSPDQYRAALAQGTPPRTPAQFDALVRDSL 179 Query: 148 VKNDFMLKYGNL 159 ++ Sbjct: 180 QQSVIPQAIAES 191 >gi|229084254|ref|ZP_04216537.1| Foldase protein prsA 2 [Bacillus cereus Rock3-44] gi|228699054|gb|EEL51756.1| Foldase protein prsA 2 [Bacillus cereus Rock3-44] Length = 283 Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 16/174 (9%), Positives = 42/174 (24%), Gaps = 6/174 (3%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 + N + + + +K D + Sbjct: 95 LESNRLKDEDDFKDQIRFKLAMDKAIKQSVTEKDVKANYKPEIKASHILVNDEKTANDIK 154 Query: 207 ESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 + ++ + G Y + +F+ K + + P + Sbjct: 155 KQLDEGASFEELAKQHSQDPGSKEKGGDLGYFGPGKMASEFEEAAYKLNVGEISKPIKSS 214 Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE---AEYVKKLRSNAIIH 315 G I + DK++L +K + ++ + + + A I Sbjct: 215 HGYHIIKLTDKKELKPYDEVKDSIRKDLEEKRLADQTTGQKILLDEFK-KADIK 267 >gi|167589752|ref|ZP_02382140.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ubonensis Bu] Length = 310 Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 36/283 (12%), Positives = 66/283 (23%), Gaps = 55/283 (19%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 +NG I I + + K L +LI L +Q +K V Sbjct: 69 VNGVPIMQAQIDEAVRAGKAPDTPA-LRAALKNQLIARELFRQAAQKQHYDTKPQVVAAV 127 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + ++ +++ Sbjct: 128 ------------------------------EQAKALAMTQAYLRDQVKPAPVTDADVKAR 157 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + EY + K + + + Sbjct: 158 YDAIVATLGENEYKPSAI-----------AVNDADTAKQLIARFRKGEDFAKLAQDNSKG 206 Query: 226 IHDVSIGKAQYL----------LESDLHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICD 274 G ++ ++ P + L+K Q T +P + + D Sbjct: 207 PAAAQGGALNWISFKTPITAGNTQNWPQPLAEALVKLPQGGLTRDPVQVGDAYWILRVDD 266 Query: 275 KRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 KR + K L Q +EK A+ V L NA I Sbjct: 267 KRPTQVPAFDQAKDMLRQQLEQVAMEKATAQVVADLIRNARIQ 309 >gi|226355582|ref|YP_002785322.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus deserti VCD115] gi|226317572|gb|ACO45568.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase precursor [Deinococcus deserti VCD115] Length = 626 Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 30/303 (9%), Positives = 74/303 (24%), Gaps = 26/303 (8%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLK 86 + S S +NG+ +T ++ +R + G L + + ++ Sbjct: 29 SLGSLFSSPNKGTPALVVNGKTVTAEELDGVRRSNPVLSSTDTGILGDDFKTFTVAQKVR 88 Query: 87 KQEIEKSGITFD---SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + + ++ + N+ ++ ++ L G+ D ++ L Q Sbjct: 89 QVLVAQAASDIKVSRDDVNAEVKKIREANSLTDSKAWTDALQGVGLTDATYRAQLREQLA 148 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 V+ E E Q + + K Sbjct: 149 VNRKVEELRKAVPAATEAEAKLYYDLNPEKFQS---------EARIIGRQIVVAKEAKAK 199 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD--------LHPQF-QNLLKKSQ 254 + + +++ G + L + ++ Sbjct: 200 ELLAQVRGGADFAAVAKANSTEF-ADRGGALGPVENGKPRPVAQVALPAEVGAAAFALTK 258 Query: 255 NNTTNPYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 T+ + + + KA T K E+V+ L + Sbjct: 259 GGITDVVASGDKFYIVKVEQYLAPATKPFAEAKADAITAVTEQKKNAALEEWVEGLEKDV 318 Query: 313 IIH 315 I Sbjct: 319 KIE 321 >gi|284006425|emb|CBA71661.1| peptidyl-prolyl cis-trans isomerase D [Arsenophonus nasoniae] Length = 623 Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 34/387 (8%), Positives = 97/387 (25%), Gaps = 87/387 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT-------- 52 M + T+ + + + +++ F + + SY S+ +NG I+ Sbjct: 1 MMDNLRTAANSLVLKIVFVIIILSFVLTGVGSYLIGGSSNH-VAKVNGTAISQVQLQQAF 59 Query: 53 --DGDI------SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + ++ L + A++ LI TL Q + G+T N V Sbjct: 60 QQEKQVLQERLGDQFAEIASSEQGMQMLRRQALERLIGVTLLNQYSNQLGLTASDNQVKQ 119 Query: 105 FFVQH---ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + +E + + L + + + Q + I + K Sbjct: 120 DIYNMPIFQTDGHFDSEKYRTILSQHNVNADDLAQEIRQNLINRQLSKMYITDEFVLPEE 179 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 ++ K + E+ +N + ++ + Sbjct: 180 VKSYAQLLLQQREVKTATLSLANYQSKQTVTDKELQDYYNAHQNSFISPEQVQVSYIKLD 239 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA------------------------- 223 + V+ + + ++ Sbjct: 240 AASQRENVAVKDEELKNYYEQNIANFTQPAQKHYSMIQLPTEKEADSVVKSLAGGADFKQ 299 Query: 224 -------SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 K + G ++ + + + + + + D + Sbjct: 300 LVAEKSTDKFSAANHGALGWMEATSTPSEIIAANLTKKGQISAVIKSASNYIIFRLDDIK 359 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHE 301 + ++K ++ K Sbjct: 360 PEVVKPFQSVKTEIANTLKNEKAINAF 386 >gi|304409715|ref|ZP_07391335.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS183] gi|307304071|ref|ZP_07583824.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica BA175] gi|304352233|gb|EFM16631.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS183] gi|306912969|gb|EFN43392.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica BA175] Length = 621 Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 31/271 (11%), Positives = 63/271 (23%), Gaps = 9/271 (3%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV--NYFF 106 + I + + + + L+ K T Y Sbjct: 139 QAILR-QLGYQPQAFRDMMRVDMTRRQLTAALVGTEFVLAGEAKQLAELQGQTRDVRYLV 197 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 V A + + F + + ++ DF + E A Sbjct: 198 VDSAPFLATAVVTDEQVKNYYDANQGQFMSPEMVSLEYVELNAADFAKNNPVSDEEAQAY 257 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 ++ K V + + + D + + + + Sbjct: 258 YEEHKAQYVSNEKRLAAHILVMPGSDEAAAKAKAE--DLAKQLDSGADFADLAKANSDDT 315 Query: 227 -HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEI 282 GK + + P F L ++ + T G I + D + Sbjct: 316 LSAEQGGKLDWFEPGVMDPAFDAALFALNKGQHSAVVKTDFGFHIIKLLDVQPGVTVPFA 375 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA + AQ K KL + Sbjct: 376 DVKAKIVAQLQDKKAVDQFYSLQSKLADTSY 406 Score = 67.4 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 19/238 (7%), Positives = 66/238 (27%), Gaps = 19/238 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ I V++ F + SY + + +NG++IT ++ + Sbjct: 1 MLEKIRDGSQGVIAKGILVLVILSFAFAGVSSYLG-STTDVPAAEVNGDIITKAELEQAY 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +++ ++ L+ + L Q + G+ + Sbjct: 60 QSERSRMEQQLGEMFAALSADEKYLQSIKQSVLERLVADKLIDQAAKAMGLRVSDEQIIA 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 D + + + + D+ + E + Sbjct: 120 AVKTEPAFQTDGKFDNDRYQAILRQLGYQPQAF--RDMMRVDMTRRQLTAALVGTEFVLA 177 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 +++ + + +R ++ ++ + ++ + ++ Sbjct: 178 GEAKQLAELQGQTRDVRYLVVDSAPFLATAVVTDEQVKNYYDANQGQFMSPEMVSLEY 235 Score = 37.3 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 40/131 (30%), Gaps = 4/131 (3%) Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 N K+ + E +R + + +++ A+ + V+ K + Sbjct: 487 EVKANITERLKQDQANEAARAKAQELMAQVKAGATDLGLVAKAKLGRGAQDVDAAIVGKA 546 Query: 250 LKKSQNNTTNPYVT---QKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYV 305 + +T+ T G +A+ L L + E + Sbjct: 547 FQMPTPSTSPVVDTVGLANGYAVVALDKVNAAEGVSDELVNALKQRLNAQYSEADYRGLI 606 Query: 306 KKLRSNAIIHY 316 L++NA + Y Sbjct: 607 DSLKANAKVLY 617 >gi|126173842|ref|YP_001049991.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS155] gi|125997047|gb|ABN61122.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS155] Length = 621 Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 31/271 (11%), Positives = 63/271 (23%), Gaps = 9/271 (3%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV--NYFF 106 + I + + + + L+ K T Y Sbjct: 139 QAILR-QLGYQPQAFRDMMRVDMTRRQLTAALVGTEFVLAGEAKQLAELQGQTRDVRYLV 197 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 V A + + F + + ++ DF + E A Sbjct: 198 VDSAPFLATAVVTDEQVKNYYDANQGQFMSPEMVSLEYVELNAADFAKNNPVSDEEAQAY 257 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 ++ K V + + + D + + + + Sbjct: 258 YEEHKAQYVSNEKRLAAHILVMPGSDEAAAKAKAE--DLAKQLDSGADFADLAKANSDDT 315 Query: 227 -HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEI 282 GK + + P F L ++ + T G I + D + Sbjct: 316 LSAEQGGKLDWFEPGVMDPAFDAALFALNKGQHSAVVKTDFGFHIIKLLDVQPGVTVPFA 375 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA + AQ K KL + Sbjct: 376 DVKAKIVAQLQDKKAVDQFYSLQSKLADTSY 406 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 19/238 (7%), Positives = 66/238 (27%), Gaps = 19/238 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ I V++ F + SY + + +NG++IT ++ + Sbjct: 1 MLEKIRDGSQGLIAKGILVLVILSFAFAGVSSYLG-STTDVPAAEVNGDIITKAELEQAY 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +++ ++ L+ + L Q + G+ + Sbjct: 60 QSERSRMEQQLGEMFAALSADEKYLQSIKQSVLERLVADKLIDQAAKAMGLRVSDEQIIA 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 D + + + + D+ + E + Sbjct: 120 AVKTEPAFQTDGKFDNDRYQAILRQLGYQPQAF--RDMMRVDMTRRQLTAALVGTEFVLA 177 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 +++ + + +R ++ ++ + ++ + ++ Sbjct: 178 GEAKQLAELQGQTRDVRYLVVDSAPFLATAVVTDEQVKNYYDANQGQFMSPEMVSLEY 235 Score = 38.5 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 40/131 (30%), Gaps = 4/131 (3%) Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 N K+ + E +R + + +++ A+ + V+ K + Sbjct: 487 EVKANIAERLKQDQANEAARAKAQELMAQVKAGATDLGLVAKAKLGRGAQDVDAAIVGKA 546 Query: 250 LKKSQNNTTNPYVT---QKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYV 305 + +T+ T G +A+ L L + E + Sbjct: 547 FQMPTPSTSPVVDTVGLANGYAVVALDKVNAAEGVSDELVNALKQRLNAQYSEADYRGLI 606 Query: 306 KKLRSNAIIHY 316 L++NA + Y Sbjct: 607 DSLKANAKVLY 617 >gi|330721964|gb|EGG99902.1| Peptidyl-prolyl cis-trans isomerase ppiD [gamma proteobacterium IMCC2047] Length = 471 Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 21/199 (10%), Positives = 68/199 (34%), Gaps = 5/199 (2%) Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + + +++ + ++ + DF E EI Q+ + + Sbjct: 51 SDAEVQAYYEENLADYMSEESLKIEYLELKQADFASNIDVDEAEIEQLYQQETDALAAQQ 110 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 R I + + ++ I + + ++++ + G ++ Sbjct: 111 ERRAAHILITEEARSSNEA-EQLIIELQNKIKAGEDFAELAKRYSEDPGSAENGGDLGFV 169 Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTP 294 + P+F+ +L ++ ++ T+ G I + + R + + L+ + Sbjct: 170 EKGAFVPEFEQVLFSLNEGEVSDIVETEFGYHLIRLEELRTPEAEPFEMARERLAGELRF 229 Query: 295 TKIEKHEAEYVKKLRSNAI 313 K E+ ++L++++ Sbjct: 230 RKAEEEFVAAAEELQNDSF 248 Score = 36.2 bits (81), Expect = 6.3, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 84/269 (31%), Gaps = 11/269 (4%) Query: 60 IALLKLQKINGELEKIAVQELIVE----TLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 I L +L+ E ++A + L E +++ + + + + V+ A+N GL Sbjct: 203 IRLEELRTPEAEPFEMARERLAGELRFRKAEEEFVAAAEELQNDSFSAGDLVEPAQNQGL 262 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 S + F +QG G F++ + + + + + + + K N + Sbjct: 263 SIQTTEFFSRQQGSGIAAFEKVRRVAFSDELLTEGNNSDLIELSKDHVAVIRVKQHNPSK 322 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG--- 232 + L K + +++ + LR K + + G Sbjct: 323 PQALEEVASDIRSTLKARAAQQNAQKMGEQILVELRDGKTLQQASDDYGYPLNSYQGVNR 382 Query: 233 KAQYLLESDLHPQFQNLLKKSQNNTTN-PYVTQKGVEYI---AICDKRDLGGEIALKAYL 288 A + L F + TT +Q + + + K + Sbjct: 383 IANDVDSEILDELFALAKPRDSGATTGSLINSQGDFVILSLNKVSEGDASALSDPEKQAM 442 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 S + E+V ++A I + Sbjct: 443 SRILAQQTGIQTLKEFVSGQLASAEIEKF 471 >gi|325846640|ref|ZP_08169555.1| putative peptidylprolyl isomerase PrsA3 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481398|gb|EGC84439.1| putative peptidylprolyl isomerase PrsA3 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 248 Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 31/287 (10%), Positives = 79/287 (27%), Gaps = 46/287 (16%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLK--LQKINGELEKIAVQELIVETLKKQEIEKS 93 + I +NG+ I+ D+ I ++ Q +N + EL+ + L + ++ Sbjct: 2 TEKQNEILAEVNGKKISQKDVVSFITQMQGGQQFLNPQGIHQIADELVNQELMYIDAIEN 61 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + D + L +++ + + Sbjct: 62 KLDQDKEFTDQV-------------------------------KLTKENMLKNYAMHLLF 90 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E+ K + + + + N+ + ++ Sbjct: 91 KDIKVSDDELKEYYDNNKEVIKQPKTYKASHILVDSEDEANKILEE----------IKAG 140 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAI 272 + K S G + + +F+ K ++ + P +Q G I + Sbjct: 141 LEFEKAADKYSTDKASKGGDLGEFPQGAMVKEFEEALDKLNEGEISKPVKSQFGYHIIKL 200 Query: 273 CDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 D +K + K ++ E K++ + Y Sbjct: 201 DHTHDAHLPEFDEIKDRIHDTLLMIKRQEKYLEKTNKIKEKVDVKKY 247 >gi|57168166|ref|ZP_00367305.1| peptidyl-prolyl cis-trans isomerase [Campylobacter coli RM2228] gi|57020540|gb|EAL57209.1| peptidyl-prolyl cis-trans isomerase [Campylobacter coli RM2228] Length = 273 Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 97/302 (32%), Gaps = 41/302 (13%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQ 78 + +++ + +++ T+NG+ I+D ++S+ A + + +K +Q Sbjct: 4 VSLIAAALIAGVTLNLNAATIATVNGKNISDTEVSEFFAPMLRGEDFKSLPDHQKKALLQ 63 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 + I++ L Q+ +K + D Sbjct: 64 QYIMQDLILQDAKKQNLEKDPLYKKEL-------------------------------ER 92 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 A SI +V + + ++ A ++ K ++ ++ + + Sbjct: 93 AKDSILVNVYQEKILNSIKVDSSKVKAFYEQNKEKYIKPAAVQAKHILVSSEQEAKDIIK 152 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN-- 256 + + + + + + K G+ + +S + F + +N Sbjct: 153 ELKGLKGKALDDKFSQLAQE--KSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTI 210 Query: 257 TTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 TT P T G I + R + +K + + +K + + L +NA + Sbjct: 211 TTTPVKTNFGYHVILKENSRAKEQIKFDDVKKGIENGLKFEEFKKVINQKGQDLLNNAKV 270 Query: 315 HY 316 Y Sbjct: 271 EY 272 >gi|229091310|ref|ZP_04222528.1| Foldase protein prsA 1 [Bacillus cereus Rock3-42] gi|228692076|gb|EEL45817.1| Foldase protein prsA 1 [Bacillus cereus Rock3-42] Length = 149 Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 41/123 (33%), Gaps = 6/123 (4%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256 +K K+ +E ++++ G+ +F+ K Sbjct: 11 EKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEEAAYKLDAGQ 70 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNA 312 + P T G I + DK++L +K + +++ ++ V +L +A Sbjct: 71 VSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQVVNELLKDA 130 Query: 313 IIH 315 I Sbjct: 131 DIK 133 >gi|257459188|ref|ZP_05624307.1| putative periplasmic protein [Campylobacter gracilis RM3268] gi|257443573|gb|EEV18697.1| putative periplasmic protein [Campylobacter gracilis RM3268] Length = 296 Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 107/299 (35%), Gaps = 35/299 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 ++F + + + + + ++ E IT +++ ++QK+ G + A++ LI Sbjct: 5 LLFSAMICAVCANAEVVNGVIAVVDDEPITGYELA------RVQKLTGASPQAAMEILIG 58 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + L++ EI++ GI + ++ A LS + + + KQGI + FK + Sbjct: 59 QKLQQSEIKRRGIAVNDAEIDARLKAIADQNKLSLDQLKTAVQKQGINYDDFKANVRRTL 118 Query: 143 IWPDVVKNDFML-KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + + + F ++ + + ++ I + ++ + Sbjct: 119 LEEKLYGSIFADVQHRTTPENVKKFYSQNSSLFTTFDSITLTRYIAKSQAPLDRIRTNPK 178 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNP 260 ++ ++ ++ L + + + + Q + Sbjct: 179 LRPSDVYVMK-----------------------GTLKANQMDEGLKYIVTNVEQGKFSPI 215 Query: 261 YVTQKGVEYIAICDK---RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 T+ G E + DK R L + + T + +K E+ +LRSNA I Sbjct: 216 IPTRNGYEMFYVNDKKGLRTLDFDSVQDKAIEGYVTSER-KKAITEFNDRLRSNANIRI 273 >gi|126740048|ref|ZP_01755738.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseobacter sp. SK209-2-6] gi|126718867|gb|EBA15579.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseobacter sp. SK209-2-6] Length = 265 Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 25/205 (12%), Positives = 59/205 (28%), Gaps = 8/205 (3%) Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 E ++ + +++ +++ + +K + EI A + Sbjct: 54 QEARRQKIEADPHEVEPGRFETDEEALIRGLLETEVDVK-SPTDDEIKAEWARDPARFRS 112 Query: 177 EYLIRTVLFSIPDNKLQNQ---GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 L + + ++K + + +K + + G Sbjct: 113 APLWEVSHILCACDPRDEEGREKALKKAQFLTATLLAKPSIFASLAKKESDCGSKEAGGS 172 Query: 234 AQYLLESDLHPQFQNL-LKKSQNNTT-NPYVTQKGVEYIAI--CDKRDLGGEIALKAYLS 289 L D P+F+ + Q T P +++ G + + + A K + Sbjct: 173 LGQLRPGDSVPEFEQVLFDLEQGQITAEPVLSRHGYHIVRMDALAEGQELPFEAAKRSIM 232 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAII 314 + YV+KL A I Sbjct: 233 LAMEKAAWTRAAQAYVQKLIEGAEI 257 >gi|310829352|ref|YP_003961709.1| hypothetical protein ELI_3795 [Eubacterium limosum KIST612] gi|308741086|gb|ADO38746.1| hypothetical protein ELI_3795 [Eubacterium limosum KIST612] Length = 497 Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 31/306 (10%), Positives = 78/306 (25%), Gaps = 29/306 (9%) Query: 34 KSWAMSSRIRTTINGEVITD-----GDISKRIALLKLQKINGELEKIAVQE--------- 79 ++ IN E I I++ + + + +V+E Sbjct: 172 NPEEELDQVVGKINDEEIKRGIYNYYYINEEMTSYYSGGQGLQTDDESVKETNKSIFNSI 231 Query: 80 -----LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 LI + K ++ + T + + + Sbjct: 232 AQNKALIKYCEEYNIEIKQEEIDNALQTKQSIQKMMFQTDDELNQYLENYFLTKEKYDEY 291 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 ++ A ++ + ++ + K+ + + + Sbjct: 292 QKEDARGIAAGQAIQAKVTEDVKVSDTDLRKYYKDHKDSYDESTVSAEHILT-------E 344 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KS 253 + I D + + ++ S + + +F + Sbjct: 345 DEALANEIYDKAKDVKTKEDFEKIMNEYKSNEKVKEATDLGAFNKEKMVSEFSDAAFGME 404 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 +N+ + P T+ G I + DK D G K ++ K + + + L Sbjct: 405 KNSVSKPVKTEYGYHIIYVYDKNDAGEASFEDKKDEITKAVKEEKGTEDYNKLKEDLLKK 464 Query: 312 AIIHYY 317 I Y Sbjct: 465 EKIDIY 470 >gi|326318802|ref|YP_004236474.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375638|gb|ADX47907.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 299 Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 11/170 (6%), Positives = 41/170 (24%), Gaps = 5/170 (2%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + + + + + + +I+ E+ Sbjct: 109 AKVDKDNMPSDAVAEGLARNIYKAKPERFKVPEQVQVRHILIAGTGADSRAQIEKIEQEL 168 Query: 210 LRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKG 266 ++ + K G + + P+F + ++ G Sbjct: 169 KGGADFAQLAKERSADKGSAAKGGDLGFFEAGKMVPEFDKAAFALTKPGQLSGIVESKFG 228 Query: 267 VEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + + +++ L + ++ + L+ A I Sbjct: 229 YHILQLEGRHAARTRSFDEVRSELMQEVRANVQQEARVADAQALQQEAKI 278 >gi|289434727|ref|YP_003464599.1| protein export protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170971|emb|CBH27513.1| protein export protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 293 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 31/312 (9%), Positives = 82/312 (26%), Gaps = 47/312 (15%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 ++ F K++ + + + S + IT D+ + + Sbjct: 1 MTKFKKIMISLITATLLILAGCGSSA--------VVKTDAGNITQDDLYEAMKT------ 46 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 VQ+L E + + + + ++ E + + Sbjct: 47 --TYGNEVVQQLTFEKILEDKYTVTEKEVNAEY------------KKYEEQYGDSFESTL 92 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K + +V+ + + + + +R +L Sbjct: 93 ASSNLTKTSFKENIKYNLLVQKATEANIDVSDSTLKKYYKTW----QPDITVRHIL---- 144 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQ 247 + K+ + K + +++++ + G ++ F+ Sbjct: 145 -------VDDEATAKEVQTKLKNGEKFTDLAKEYSTDTATSTNGGLLDPFGTGEMDEAFE 197 Query: 248 NLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEY 304 + ++ + T G I + K D KA + ++ Sbjct: 198 KAAYALEKTDDVSGIVKTSYGYHLIQLVKKTDKTTYSKDKAKVKEAYIQSQLTSENMTAA 257 Query: 305 VKKLRSNAIIHY 316 +KK A I Sbjct: 258 LKKELKAANIDI 269 >gi|323526043|ref|YP_004228196.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1001] gi|323383045|gb|ADX55136.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1001] Length = 646 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 68/263 (25%), Gaps = 17/263 (6%) Query: 52 TDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 T +R+ + Q++ ++ A +TL + E + + + + +A Sbjct: 149 TPDQYDERVRYSIATQQLPASIQGSAFTS---KTLAQHLTELAEQQREVQGIAFHPRDYA 205 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + ++ D + + ++ Sbjct: 206 AKVQPTDAQLQAYYDAHRNDFATPATATIQYLVMSP---ATLAASVQPSDADLKKYYDDN 262 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH--- 227 E +R I K + K + AEE ++ ++ + A + Sbjct: 263 IAHYRTEGQVRASHILIAAPKDASPADKAKAKQKAEELLAQVKAHPDQFAQIAQQNSQDP 322 Query: 228 --DVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GG 280 G Y + + ++ + T G + + D + Sbjct: 323 GSAAKGGDLGYFGRGMIAGGQAFDDAVFALKKDEVSGIVQTDFGYHIVKVTDVKPAVTRP 382 Query: 281 EIALKAYLSAQNTPTKIEKHEAE 303 +K ++ K ++ Sbjct: 383 FDEVKDQIARDLKTQLASKAFSD 405 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/228 (8%), Positives = 56/228 (24%), Gaps = 15/228 (6%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 + + ++ V I ++ + S ++NG IT + + + Sbjct: 9 KRLMMFMLILVIVPGLGFVGIQGFRGFFDESANVASVNGHKITRAEYDNAMRQQLDRARQ 68 Query: 70 -------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQHARNTG 114 E + LI + + E ++ +T + V + Sbjct: 69 MLGAQFDIKAFDTPERRSEMLDGLIEQRVLADETQRLHLTASDDAVRRVLLNDPVISSLK 128 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 KQ + + + + Q + + Sbjct: 129 KPDGSIDVDRYKQLLAMQGMTPDQYDERVRYSIATQQLPASIQGSAFTSKTLAQHLTELA 188 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++ ++ + F D + Q + + R ++ Sbjct: 189 EQQREVQGIAFHPRDYAAKVQPTDAQLQAYYDAHRNDFATPATATIQY 236 >gi|229101746|ref|ZP_04232463.1| Foldase protein prsA 1 [Bacillus cereus Rock3-28] gi|228681694|gb|EEL35854.1| Foldase protein prsA 1 [Bacillus cereus Rock3-28] Length = 287 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 88/305 (28%), Gaps = 46/305 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + ++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYNQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QG+ + FK Sbjct: 52 VLNNMVMEKVLIKNYKVEDKDVDKRFDETK--------KQVGDQFDTLLKQQGMKEETFK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + ++ K + + Sbjct: 104 NTIRASLAQEKAIEKTITDKELKDNYKPQIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G + + +F++ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFEHGKMVKEFEDAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRS 310 ++ + P TQ G I + D ++ KA + + K++ + + K Sbjct: 200 KDEVSEPVKTQFGYHIIKVTDIKEPEKSFEQSKADIKKELIAKKMQDGAFMNDLMMKEIK 259 Query: 311 NAIIH 315 A + Sbjct: 260 KADVK 264 >gi|91205025|ref|YP_537380.1| hypothetical protein RBE_0210 [Rickettsia bellii RML369-C] gi|122426012|sp|Q1RK23|Y210_RICBR RecName: Full=Uncharacterized protein RBE_0210; Flags: Precursor gi|91068569|gb|ABE04291.1| unknown [Rickettsia bellii RML369-C] Length = 294 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 93/302 (30%), Gaps = 23/302 (7%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEK 74 ++ I + + A +S I +N E IT + R ++ N +L Sbjct: 4 LLLIITVFFTCSAVAETSNIVALVNNEPITLNEFRARKKMIMALNNVEEVTPAQNKQLSD 63 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 IA++ LI E+L Q ++ + +L + + + F Sbjct: 64 IAIKSLIDESLLFQYYGDKE--ISQEEIDNAIKSIEDRNKMPHGSLLQYLKSRSVNPDSF 121 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + + I +V+ EI V + D Sbjct: 122 ISQIKSELIKMNVLSG-LSRSVQVSNKEIDVAILSSDQKEVEVSMQIFTSKDKSDKTFAQ 180 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 ++ ++K+ + + L ++ + K+ + + + + Sbjct: 181 MNNLKSKLKNCSDVKKSLYENFATMTVITDKLSKIE------------EAKQTIVKDLNP 228 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 N T+N + E + +C K+ L Y+ T KI + ++ + + A I Sbjct: 229 NQTSNVFEKYNEFEIVQVCTKKILNISEDENNYVVNFLTNKKISQKAQKFFEDMHKKAYI 288 Query: 315 HY 316 Sbjct: 289 KI 290 >gi|166710933|ref|ZP_02242140.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 656 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 22/249 (8%), Positives = 69/249 (27%), Gaps = 5/249 (2%) Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 AL++ + + + E + + A +T ++ Sbjct: 173 ALVRDSLQQSVIPQAVADSGFATKS-EFERLLKLMGETRDVELAMLPPPAMDTAPVSDAQ 231 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 D + + I+ + + + ++K + + + L Sbjct: 232 IKQWYDGHTQDFRQPEAVTIEYVELNAATMRPATAADEATLRKRYEEEKARFVEPDQRLA 291 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 +L S + + K K A E++ + + + G ++ + Sbjct: 292 SHILISAGSDAAAQKAAEAKAAKLAAEAKAPGADFAALAKANSQDPGSKDAGGDLGWVEK 351 Query: 240 SDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 + F++ + P ++ G I + + + G+ + Q +++ Sbjct: 352 GTMVKPFEDALFSMKAGDVVGPIKSEFGYHVIQLREVKGGQGKS--FEQVRDQLAAEQLK 409 Query: 299 KHEAEYVKK 307 + Sbjct: 410 ADTDKAFAD 418 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 25/236 (10%), Positives = 58/236 (24%), Gaps = 34/236 (14%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI----N--------- 47 M K+ S +I ++I F V SY ++ + N Sbjct: 1 MLQKLRDKTSGWIATAILGLLMIPFLFVIDNSYLGGIGANN-VAKVQAPPNWWKSAPSWW 59 Query: 48 -------GEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++Q+ + E + +L+ E + + Sbjct: 60 PVSLLWQHHEISTQDFRARFEQARMQERKRQGENFDPRTFESRENKLQVLDQLVDEQVVR 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E +GI TV + + G + + Sbjct: 120 LGAEDAGIVIGDATVREYIANIQAFQVDGKFSPDQYRAALAQGTPPRTPAQFDALVRDSL 179 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++ + + +++ + + + P Q + Sbjct: 180 QQSVIPQAVADSGFATKSEFERLLKLMGETRDVELAMLPPPAMDTAPVSDAQIKQW 235 >gi|217973906|ref|YP_002358657.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS223] gi|217499041|gb|ACK47234.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS223] Length = 621 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 31/271 (11%), Positives = 63/271 (23%), Gaps = 9/271 (3%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV--NYFF 106 + I + + + + L+ K T Y Sbjct: 139 QAILR-QLGYQPQAFRDMMRVDMTRRQLTAALVGTEFVLAGEAKQLAELQGQTRDVRYLV 197 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 V A + + F + + ++ DF + E A Sbjct: 198 VDSAPFLATAVVTDEQVKNYYDANQGQFMSPEMVSLEYVELNAADFAKNNPVSDEEAQAY 257 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 ++ K V + + + D + + + + Sbjct: 258 YEEHKAQYVSNEKRLAAHILVMPGSDEAAAKAKAE--DLAKQLDSGADFADLAKANSDDT 315 Query: 227 -HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEI 282 GK + + P F L ++ + T G I + D + Sbjct: 316 LSAEQGGKLDWFEPGVMDPAFDAALFALNKGQHSAVVKTDFGFHIIKLLDVQPGVTVPFA 375 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA + AQ K KL + Sbjct: 376 DVKAKIVAQLQDKKAVDQFYSLQSKLADTSY 406 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 19/238 (7%), Positives = 66/238 (27%), Gaps = 19/238 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ I V++ F + SY + + +NG++IT ++ + Sbjct: 1 MLEKIRDGSQGVIAKGILVLVILSFAFAGVSSYLG-STTDVPAAEVNGDIITKAELEQAY 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +++ ++ L+ + L Q + G+ + Sbjct: 60 QSERSRMEQQLGEMFAALSADEKYLQSIKQSVLERLVADKLIDQAAKAMGLRVSDEQIIA 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 D + + + + D+ + E + Sbjct: 120 AVKTEPAFQTDGKFDNDRYQAILRQLGYQPQAF--RDMMRVDMTRRQLTAALVGTEFVLA 177 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 +++ + + +R ++ ++ + ++ + ++ Sbjct: 178 GEAKQLAELQGQTRDVRYLVVDSAPFLATAVVTDEQVKNYYDANQGQFMSPEMVSLEY 235 Score = 38.1 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 40/131 (30%), Gaps = 4/131 (3%) Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 N K+ + E +R + + +++ A+ + V+ K + Sbjct: 487 EVKANITERLKQDQANEAARAKAQELMAQVKAGATDLGLVAKAKLGRGAQDVDAAIVGKA 546 Query: 250 LKKSQNNTTNPYVT---QKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYV 305 + +T+ T G +A+ L L + E + Sbjct: 547 FQMPTPSTSPVVDTVGLANGYAVVALDKINAAEGVSDELVNALKQRLNAQYSEADYRGLI 606 Query: 306 KKLRSNAIIHY 316 L++NA + Y Sbjct: 607 DSLKANAKVLY 617 >gi|229154723|ref|ZP_04282838.1| Foldase protein prsA 1 [Bacillus cereus ATCC 4342] gi|228628671|gb|EEK85383.1| Foldase protein prsA 1 [Bacillus cereus ATCC 4342] Length = 287 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 87/305 (28%), Gaps = 46/305 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S ++ T+ G+ IT D ++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKVVTSKAGD-ITKEDFYTQMK--------QQYGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKDVDKKFD--------EMKKQYGDQFDTLLKQQGIKEETIK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q ++ K + + Sbjct: 104 NGVRAQLAQEKAIEKTITDKELKDNYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G + + +F+ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEEAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 ++ + P +Q G I + D ++ KA + + K + + + + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKAQDGEFMNDLMMKEIK 259 Query: 311 NAIIH 315 A + Sbjct: 260 KADVK 264 >gi|21673541|ref|NP_661606.1| hypothetical protein CT0711 [Chlorobium tepidum TLS] gi|21646651|gb|AAM71948.1| lipoprotein, putative [Chlorobium tepidum TLS] Length = 450 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 91/312 (29%), Gaps = 45/312 (14%) Query: 13 IKLLTTYFVLIIFC-IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ----K 67 +K +T+ F +++F +V + +S + +NG IT+ I + + Sbjct: 1 MKKITSLFFVLLFAILVGCSEKSAQESNSGVAAVVNGVEITNRQIDYFYQRTAMPGMSAE 60 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 + L++ + +LI L + ++ + + + + AE Sbjct: 61 DSANLKRRILSDLIRIELLAGKAKEMKLDNNPDYSMALYAAQKNVLAGLAE--------- 111 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + + + + Q + L Sbjct: 112 ---------------------RKLAGNQAPVTPDQAESVVQNAPQLFAGRKLYVFEEVIF 150 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 P + + + L + K + F S + L L Sbjct: 151 PGVDMPLLESLDAMATNGAPLSGLLDELKAKKKPFNSSLKA--------LTSEQLPAPIL 202 Query: 248 NLLKKSQNNTTNPYVTQKGV-EYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHEAEYV 305 +L K + NT + V + + D E + +A + + ++ + Sbjct: 203 AVLNKLKPNTPQVVRSGDKVSVILVLHDAIPAPLEGDPARRAAAAMIEANQRNQALSKAM 262 Query: 306 KKLRSNAIIHYY 317 ++L NA I YY Sbjct: 263 QELLDNAKITYY 274 >gi|47567527|ref|ZP_00238238.1| rotamase family protein [Bacillus cereus G9241] gi|47555722|gb|EAL14062.1| rotamase family protein [Bacillus cereus G9241] Length = 288 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 93/305 (30%), Gaps = 45/305 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + +++ N + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYEQMK-------NSQTGKQ 52 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + D V+ F + + G + Sbjct: 53 TLNNMVMEKVLI-----KNYKVDDKEVDKKFDEMKKQLGDQFDTL--------------- 92 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + A ++ + + +++Y + S K + Sbjct: 93 ------LKQQGLKEETVKNGVRASLAQEKAIEKTITDKELKDYYKPEIKASHILVKDEAT 146 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 K E + ++++ G + + +F++ K Sbjct: 147 AKKVK------EELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEDAAYKLK 200 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 ++ + P +Q G I + D ++ KA + + K++ + + + K Sbjct: 201 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKMQDGQFMNDLMMKEIK 260 Query: 311 NAIIH 315 A + Sbjct: 261 KADVK 265 >gi|84622593|ref|YP_449965.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84366533|dbj|BAE67691.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 656 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 21/244 (8%), Positives = 71/244 (29%), Gaps = 8/244 (3%) Query: 70 GELEKIAVQELIVETLK----KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 L++ + + I ++ + E + + A +T ++ Sbjct: 177 DSLQQSVIPQAIADSGFATKSEFERLLKLMGETRDVELAMLPPPAMDTAPVSDAQIKQWY 236 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 D + + I+ + + + ++K + + + L +L Sbjct: 237 DGHTQDFRQPETVTIEYVELNAATMRPATAADEATLRKRYEEEKARFVEPDQRLASHILI 296 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHP 244 S + + K K A E++ + + + G ++ + + Sbjct: 297 SAGSDAAAQKAAEAKAAKLAAEAKAPGADFAALAKANSQDPGSKDAGGDLGWVEKGTMVK 356 Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 F++ + P ++ G I + + + G+ + + +++ + Sbjct: 357 PFEDALFSMKAGDVVGPIKSEFGYHVIQLREVKGGQGKS--FEQVRDKLAAEQLKADADK 414 Query: 304 YVKK 307 Sbjct: 415 AFAD 418 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 24/236 (10%), Positives = 58/236 (24%), Gaps = 34/236 (14%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI----N--------- 47 M K+ S +I ++I F V SY ++ + N Sbjct: 1 MLQKLRDKTSGWIATAILGLLMIPFLFVIDNSYLGGIGANN-VAKVQAPPNWWKSAPSWW 59 Query: 48 -------GEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++Q+ + E + +L+ E + + Sbjct: 60 PVSLLWQHHEISTQDFRARFEQARMQERQRQGENFDPRTFESRENKLQVLDQLVDEQVVR 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E +GI +V + + G + + Sbjct: 120 LGAEDAGIVIGDASVRDYIANIQAFQVDGKFSPDKYRAALAQGTPPRTPAQFDALVRDSL 179 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++ + + +++ + + + P Q + Sbjct: 180 QQSVIPQAIADSGFATKSEFERLLKLMGETRDVELAMLPPPAMDTAPVSDAQIKQW 235 >gi|28198390|ref|NP_778704.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Temecula1] gi|182681032|ref|YP_001829192.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa M23] gi|28056460|gb|AAO28353.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Temecula1] gi|182631142|gb|ACB91918.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa M23] gi|307579500|gb|ADN63469.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 655 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 47/162 (29%), Gaps = 4/162 (2%) Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 + + Q+ + +L + + + K K EE+R Sbjct: 263 RPTPSEAMLRKRYDAQQRGEAQNEQRKAAHILITAGADAASQKVAEAKAAKLVEEARKPG 322 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 + + G ++ + F++ P T+ G I Sbjct: 323 ADFAALARINSQDPGSKDAGGDLGWVQRGMMVKPFEDALFAMKVGEVVGPIKTEFGNHVI 382 Query: 271 AICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + + + A++ L+A+ T I+K + KL Sbjct: 383 KLEEIKAAKQLPFEAVRDQLAAEQTKEDIDKAFNDVTGKLMD 424 >gi|30995417|ref|NP_439165.2| peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae Rd KW20] gi|3183576|sp|P44092|PPID_HAEIN RecName: Full=Peptidyl-prolyl cis-trans isomerase D; Short=PPIase D; AltName: Full=Rotamase D Length = 622 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 47/395 (11%), Positives = 110/395 (27%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + I + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLTNSKISKFILGLIAVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 AL---LKLQKINGE-------------LEKIAVQELIV-----------------ETLKK 87 ++ Q+ L + V +I E +K+ Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 VK D M K + EI + + V+ ++ Sbjct: 181 VKNSAEVFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 185 ------------------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + Q ++ K A E + + + Sbjct: 241 ADNISRNLQVTDVEIAQYYQDNKAQFMTQHLAHIQFANEQDAKVAYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ E++L F++ + P + + +++ Sbjct: 301 AKSLDKISGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA ++ + +E K+ A Sbjct: 360 QSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394 >gi|71276515|ref|ZP_00652790.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Dixon] gi|71901997|ref|ZP_00684044.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Ann-1] gi|170729736|ref|YP_001775169.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa M12] gi|71162692|gb|EAO12419.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Dixon] gi|71728242|gb|EAO30426.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Ann-1] gi|167964529|gb|ACA11539.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa M12] Length = 655 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 29/273 (10%), Positives = 75/273 (27%), Gaps = 19/273 (6%) Query: 57 SKRIALLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 R LL Q+ ++ + V+ ++ ++ I SG ++ + Sbjct: 152 QDRYRLLLAQEPTMRTPQMYENYVRSMMQLSMIPSTIFDSGFVPNTELERILALLGQTRN 211 Query: 114 GLS---AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF---------MLKYGNLEM 161 + + + P+ + ++ + Sbjct: 212 AELVTLPALKLDMAEISNMQIKEWYAAHRDDFRQPETLSFEYVDLDAAHLPRPTPSEAVL 271 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + Q+ + +L + + + K K EE+R Sbjct: 272 RKRYDAQQRGEAQNEQRKAAHILITAGADAASQKVAEAKAAKLVEEARKPGADFAALARI 331 Query: 222 FASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + + G ++ + F++ P T+ G I + + + Sbjct: 332 NSQDPGSKDAGGDLGWVQRGMMVKPFEDALFAMKVGEVVGPIKTEFGNHVIKLEEIKAAK 391 Query: 280 --GEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 A++ L+A+ T ++K + KL Sbjct: 392 QLPFEAVRDQLAAEQTKEDLDKEFNDVTGKLMD 424 >gi|260219454|emb|CBA26299.1| Probable parvulin-type peptidyl-prolyl cis-trans isomerase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 239 Score = 72.4 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 76/278 (27%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG+ + I + E++ +E+I + QE + G+ Sbjct: 5 VAIVNGKAVPKTRIDALAQQVARSGRPVTPEMQGQLREEVIAREIFVQEAQARGLDASDE 64 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 N + + ++ + E Sbjct: 65 YKNQL------------------------------ELTKQSILIRELFGDFQKKNPVTDE 94 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + +EY R +L D ++K K + + Sbjct: 95 ETKAEYDKFASANAGKEYRARHILVEKEDQAKALIAQLKK-----------GAKFEDLAK 143 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGVEYIAICDKRD 277 K + + G + S +F + S+ T+ P TQ G I + D R+ Sbjct: 144 KNSKDPGSGANGGDLDWANASSYVKEFSDALTGLSKGKMTDAPVKTQFGFHIIRLEDVRE 203 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + Q ++ A++ + LR+ A + Sbjct: 204 AQL--PKYEDVKPQIAQQLQQQKLAKFQEDLRAKAKVE 239 >gi|153000126|ref|YP_001365807.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS185] gi|160874748|ref|YP_001554064.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS195] gi|151364744|gb|ABS07744.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS185] gi|160860270|gb|ABX48804.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS195] gi|315266990|gb|ADT93843.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS678] Length = 621 Score = 72.4 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 31/271 (11%), Positives = 63/271 (23%), Gaps = 9/271 (3%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV--NYFF 106 + I + + + + L+ K T Y Sbjct: 139 QAILR-QLGYQPQAFRDMMRVDMTRRQLTAALVGTEFVLAGEAKQLAELQGQTRDVRYLV 197 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 V A + + F + + ++ DF + E A Sbjct: 198 VDSAPFLATAVVTDEQVKNYYDANQGQFMSPEMVSLEYVELNAADFAKNNPVSDEEAQAY 257 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 ++ K V + + + D + + + + Sbjct: 258 YEEHKAQYVSNEKRLAAHILVMPGSDEAAAKAKAE--DLAKQLDSGADFADLAKANSDDT 315 Query: 227 -HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEI 282 GK + + P F L ++ + T G I + D + Sbjct: 316 LSAEQGGKLDWFEPGVMDPAFDAALFALNKGQHSAVVKTDFGFHIIKLLDVQPGVTVPFA 375 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA + AQ K KL + Sbjct: 376 DVKAKIVAQLQDKKAVDQFYSLQSKLADTSY 406 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 19/238 (7%), Positives = 66/238 (27%), Gaps = 19/238 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ I V++ F + SY + + +NG++IT ++ + Sbjct: 1 MLEKIRDGSQGVIAKGILVLVILSFAFAGVSSYLG-STTDVPAAEVNGDIITKAELEQAY 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +++ ++ L+ + L Q + G+ + Sbjct: 60 QSERSRMEQQLGEMFAALSADEKYLQSIKQSVLERLVADKLIDQAAKAMGLRVSDEQIIA 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 D + + + + D+ + E + Sbjct: 120 AVKTEPAFQTDGKFDNDRYQAILRQLGYQPQAF--RDMMRVDMTRRQLTAALVGTEFVLA 177 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 +++ + + +R ++ ++ + ++ + ++ Sbjct: 178 GEAKQLAELQGQTRDVRYLVVDSAPFLATAVVTDEQVKNYYDANQGQFMSPEMVSLEY 235 Score = 37.7 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 39/131 (29%), Gaps = 4/131 (3%) Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 N K+ + E +R + + +++ A + V+ K + Sbjct: 487 EVKANIAERLKQDQANEAARAKAQELMAQVKAGAMDLGLVAKAKLGRGAQDVDAAIVGKA 546 Query: 250 LKKSQNNTTNPYVT---QKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYV 305 + +T+ T G +A+ L L + E + Sbjct: 547 FQMPTPSTSPVVDTVGLANGYAVVALDKVNAAEGVSDELVNALKQRLNAQYSEADYRGLI 606 Query: 306 KKLRSNAIIHY 316 L++NA + Y Sbjct: 607 DSLKANAKVLY 617 >gi|299069905|emb|CBJ41188.1| putative isomerase [Ralstonia solanacearum CMR15] Length = 270 Score = 72.4 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 79/307 (25%), Gaps = 54/307 (17%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 V + + ++ + + +NG IT + IA Q ++ + Q+L Sbjct: 2 VALALAAFTTLPAQADTLPPGVIAIVNGTRITQEQLDHAIAQSGAQANP-QVAQALKQQL 60 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I L +Q+ K+ V Sbjct: 61 IARELFRQQAAKNPAYDKLPAVKQAMQ-----------------------------EAHD 91 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 I +K++ E + ++ +EY R + Q +++ Sbjct: 92 AVITQAWLKDNIKPAPITEEQVKARYDAIVASLGDKEYKARVIQLGDDVTAAQVLAQLKQ 151 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL---------LESDLHPQFQNLLK 251 +++++ + V G ++ +L + Sbjct: 152 -----------GGDFAKLAQQYSTAPNKVRGGDMDWVSFKVPVEEGKTQNLPLPLAREIA 200 Query: 252 KSQNNT--TNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 T P + + R + G ++ + ++E+ V Sbjct: 201 TLAVGAASTAPVEAGSQRYIVKVEAARPTQVPGYETVRPAIRQALETAELERVTVRVVGD 260 Query: 308 LRSNAII 314 L A + Sbjct: 261 LLKQAKV 267 >gi|170692414|ref|ZP_02883577.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia graminis C4D1M] gi|170142844|gb|EDT11009.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia graminis C4D1M] Length = 646 Score = 72.4 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 68/263 (25%), Gaps = 17/263 (6%) Query: 52 TDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 T +R+ + Q++ ++ A +TL + E + + + + +A Sbjct: 149 TPDQYDERVRYSIATQQLPAAIQGSAFTS---KTLAQHLTELAEQQREVQGIAFHPRDYA 205 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + ++ D + + E+ Sbjct: 206 AKVQPTDAQLQAYYDAHRNDFATPATATIQYLVMSP---ATVAASVQPADAELKKYYDDN 262 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH--- 227 E +R I K + K + A+E ++ ++ + A + Sbjct: 263 IAHYRTEGQVRASHILIAAPKDASAADKAKAKQKADELLAQIKAHPDQFAQIAQQNSQDP 322 Query: 228 --DVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GG 280 G Y + + ++ + T G + + D + Sbjct: 323 GSAAKGGDLGYFGRGMIAGGKAFDDAVFALKKDEVSGIVQTDFGYHIVKVTDVKPAATKP 382 Query: 281 EIALKAYLSAQNTPTKIEKHEAE 303 +K ++ K ++ Sbjct: 383 FDEVKDQIARDLKTQLASKAFSD 405 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 20/228 (8%), Positives = 56/228 (24%), Gaps = 15/228 (6%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 + + ++ V I ++ + S ++NG IT + + + Sbjct: 9 KRLMMFMLILVIVPGLGFVGIQGFRGFFDESANVASVNGHKITRAEYDNAMRQQLDRARQ 68 Query: 70 -------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQHARNTG 114 E + LI + + E ++ +T + V + Sbjct: 69 MLGAQFDIKAFDTPERRSQMLDGLIEQRVLADETQRLHLTASDDAVRRVLLNDPVISSLK 128 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 KQ + + + + Q + + Sbjct: 129 NPDGSIDVDRYKQLLAMQGMTPDQYDERVRYSIATQQLPAAIQGSAFTSKTLAQHLTELA 188 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++ ++ + F D + Q + + R ++ Sbjct: 189 EQQREVQGIAFHPRDYAAKVQPTDAQLQAYYDAHRNDFATPATATIQY 236 >gi|52144275|ref|YP_082553.1| peptidylprolyl isomerase [Bacillus cereus E33L] gi|51977744|gb|AAU19294.1| protein export protein [Bacillus cereus E33L] Length = 287 Score = 72.4 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 88/305 (28%), Gaps = 46/305 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + +++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKDEFYEQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKEVDKKYD--------EMKKQYGDQFDTLLKQQGIKEGTLK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q ++ K + + Sbjct: 104 TGVRAQLAQEKAIEKTITDKELKENYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G + + +F++ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEDAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 ++ + P +Q G I + + ++ K + + K + + E + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTEIKEPEKSFEQSKVDIKKEIVQKKAQDAEFMNELMMKEIK 259 Query: 311 NAIIH 315 A + Sbjct: 260 KADVK 264 >gi|24373364|ref|NP_717407.1| peptidyl-prolyl cis-trans isomerase D [Shewanella oneidensis MR-1] gi|24347627|gb|AAN54851.1|AE015624_4 peptidyl-prolyl cis-trans isomerase D [Shewanella oneidensis MR-1] Length = 621 Score = 72.4 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 30/271 (11%), Positives = 61/271 (22%), Gaps = 9/271 (3%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV--NYFF 106 + I + + + + L+ K T Y Sbjct: 139 QAILR-QLGYQPQTFRSMMRVDMTRRQLTAALVGTEFVLPGEAKQLAELQGQTRDIRYLV 197 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 V A ++ F + + ++ DF + E Sbjct: 198 VDSAPFLAKASVTDEQVKSYYDANQGQFMSPEKVSLEYVELNAADFAKDSKVTDEEAQTY 257 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + K V I ++ + + +D + + + Sbjct: 258 YDEHKAQYVSNEKRLAAHILIA--LGSDEAAAKAKAEDLAKQLDNGADFAALAKANSEDT 315 Query: 227 -HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEI 282 GK + + P F L + + T G I + D + Sbjct: 316 LSAEQGGKLDWFEPGVMDPTFDTALFALQKGQHSGVVKTDFGFHIIKLLDIQPGTTVPFA 375 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +K + AQ K KL + Sbjct: 376 DVKTKIFAQLQEKKAVDQFYSLQSKLADTSY 406 Score = 65.9 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 19/174 (10%), Positives = 48/174 (27%), Gaps = 20/174 (11%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ I V++ F + SY +NG+ IT ++ + Sbjct: 1 MLEKIRDGSQGVIAKGILVLVILSFAFAGVSSYLGSTSEVP-AAEVNGDKITKAELEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +++ ++ L+ + L Q G+ + Sbjct: 60 QSERARMEQQLGEMFAALSADERYLESIKQSVLERLVADKLIDQAAAAMGLRVSDEQIIE 119 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + E + + L + G F+ + + + + Sbjct: 120 AIKSEPAFQTDGKFDNERYQAILRQLGYQPQTFRSMMRVDMTRRQLTAALVGTE 173 Score = 36.2 bits (81), Expect = 6.0, Method: Composition-based stats. Identities = 15/131 (11%), Positives = 38/131 (29%), Gaps = 4/131 (3%) Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + K+ + E +R + + +++ A+ + + K + Sbjct: 487 EVKADIAERLKQEQANEAARAKAEELMAQVKAGAADVSLTAKTKLGRGAQDVDAAIVGKA 546 Query: 250 LKKSQNNTTNPYVT---QKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYV 305 + + T G +A+ L L + E + Sbjct: 547 FQMPTPSAAPVVGTVGLANGYAVVALDKVNAADSVSDELVNALKQRLNAQYSEADYRGLI 606 Query: 306 KKLRSNAIIHY 316 + L++NA + Y Sbjct: 607 ESLKANAKVLY 617 >gi|71901123|ref|ZP_00683230.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Ann-1] gi|71729128|gb|EAO31252.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Ann-1] Length = 655 Score = 72.4 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 47/152 (30%), Gaps = 4/152 (2%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q+ + +L ++ + + K K EE+R Sbjct: 273 KRYDAQQRGEAQNEQRKAAHILITVGADAASQKVAEAKAAKLVEEARKPGADFAALARIN 332 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG- 279 + + G ++ + F++ P T+ G I + + + Sbjct: 333 SQDPGSKDAGGDLGWVQRGMMVKPFEDALFAMKVGEVVGPIKTEFGNHVIKLEEIKAAKQ 392 Query: 280 -GEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 A++ L+A+ T I+K + KL Sbjct: 393 LPFEAVRDQLAAEQTKEDIDKAFNDVTGKLMD 424 >gi|82703453|ref|YP_413019.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosospira multiformis ATCC 25196] gi|82411518|gb|ABB75627.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosospira multiformis ATCC 25196] Length = 626 Score = 72.4 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 26/252 (10%), Positives = 69/252 (27%), Gaps = 9/252 (3%) Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 R L++ Q ++ + + + E + + EK + F Sbjct: 152 RQDLMRQQLVDPFSKNAFISHSVAERILRLGDEKREVRVVQIQPEQFLANVKPGNDAIRA 211 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + + + + ++ + + + E + K + E Sbjct: 212 YYEAHKAEF-----QVPEQARVEYVVLSMDALAEKAQVTADEALAYYEEHKHEFGQPEER 266 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 +L S P + K + E R + ++ + + G + Sbjct: 267 RASHILISAPASASDRATARAKAEELLAEVRKSPQRFTELAKQHSQDPGSAPTGGDLGFF 326 Query: 238 LESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTP 294 + + F++ + ++ T+ G I + + R +K + + Sbjct: 327 ARNMMTKSFEDAVFRMKPGEISDIVETEHGFHIILLAEARGGKQASLEEVKKQVEQEVRK 386 Query: 295 TKIEKHEAEYVK 306 K K E Sbjct: 387 QKAAKTFGEMAD 398 >gi|206603474|gb|EDZ39954.1| Putative peptidyl-prolyl cis-trans isomerase [Leptospirillum sp. Group II '5-way CG'] Length = 324 Score = 72.4 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 28/306 (9%), Positives = 83/306 (27%), Gaps = 38/306 (12%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------- 63 +K + L + + ++S + + + + IT ++ + Sbjct: 16 LKTFIRFLFLSVLILFSNGCHRSEDRKTLVVGYLGKKAITVKNLEDTARFMGLGPVSRHR 75 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 L + ++E + + ++E +K GI N + + H S E F+ Sbjct: 76 PLTEWTLSERNAVLRETVQDIFLEEEGKKRGIIIRPNEIMDYLNNHFLQPDKSLETFARK 135 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + + R+ ++ + Sbjct: 136 ALFLQKTAKALAP----------------LPDISVSTERSFYKNHQNLFRVSRQAIVDHI 179 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 + Q+ + ++ L+ + + + S G+ + + + Sbjct: 180 V-----------VAKQEEAESIRDALLKGSSFGKLAKLESLGMEASSGGRMKPYPQGTMP 228 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHE 301 P F + + + G + + K ++ + T K +K Sbjct: 229 PPFDTVFTMKPGEISPVLSSSYGYHLFRLEKFIPKHTLPFSMEKNWIKKKLTREKRQKVL 288 Query: 302 AEYVKK 307 ++ + Sbjct: 289 QGWLAQ 294 >gi|291277225|ref|YP_003516997.1| major antigenic peptide PEB3\cell binding factor 2 [Helicobacter mustelae 12198] gi|290964419|emb|CBG40269.1| major antigenic peptide PEB3\cell binding factor 2 [Helicobacter mustelae 12198] Length = 278 Score = 72.4 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 39/295 (13%), Positives = 78/295 (26%), Gaps = 30/295 (10%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 I + + ++ +++ ++IT+ D N + LI + Sbjct: 6 IISAIAASILFTGISYAKDLASVDDQIITEKDFDVLKQQAPDFDFNKLTTEQ-KNGLINQ 64 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + + IEK+ + + Sbjct: 65 KVNEILIEKAAKKEKLDQTREYQEALENIKKQLLLQ-----------------------A 101 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 W V K +E R +L + + + K K Sbjct: 102 WQHNVAEQAKKTVIPEAEVKKFYDDNPKQFIQQEGHARHILVKTKEEAEKIIAELNKAPK 161 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT--NPY 261 E + + NK + + G + + P+F + + NT P Sbjct: 162 SRVEQ--KFIELANKYTTDPNAKKAQNGGDLGTFQRNQMVPEFGDAVFALSPNTYTKTPV 219 Query: 262 VTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 TQ G + + K K + K ++ + ++ LRSNA I Sbjct: 220 KTQYGYHVVYLIKKGSPKTISFAEAKPTIENMFKERKFQEMAQDKIQHLRSNAKI 274 >gi|21230443|ref|NP_636360.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|21112006|gb|AAM40284.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 656 Score = 72.4 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 17/148 (11%), Positives = 48/148 (32%), Gaps = 4/148 (2%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++K + + + L +L S + + +K K A E++ + Sbjct: 274 KRYEEEKARFVEPDQRLASHILISAGSDAAAQKAAEEKAAKLAAEAKQPGADFAALAKAN 333 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + + G ++ + + F++ + P T+ G I + + + G Sbjct: 334 SQDPGSKDAGGDLSWVEKGTMVKPFEDALFAMKAGDVVGPIKTEFGYHVIQLREVKGGQG 393 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + Q +++ + L Sbjct: 394 KS--FEQVRDQLAAEQLKADADKAFADL 419 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 24/236 (10%), Positives = 56/236 (23%), Gaps = 34/236 (14%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-------------- 46 M K+ S +I ++I F V SY ++ + Sbjct: 1 MLQKLRDKTSGWIATAILGLLMIPFLFVIDNSYLGGIGANN-VAKVQAPPTWWKSAPSWW 59 Query: 47 ------NGEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++Q+ + E + +L+ E + + Sbjct: 60 PVSLLWQHHEISTQDFRARFEQSRMQERQRQGENFDPRQFESRENKLQVLDQLVDEQVVR 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E +GI TV + + G + + Sbjct: 120 LGAEDAGIVIGDATVRDYIANIPAFQIDGKFSPDQYRAALAQGTPPRTPAQFDALVRDSL 179 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++ + +++ + + + P Q + Sbjct: 180 QQSVIPQAVAESGFATKSEFERLLTLMGETRDVELAMLPEPTADTAPVSDAQIKQW 235 >gi|239618053|ref|YP_002941375.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Kosmotoga olearia TBF 19.5.1] gi|239506884|gb|ACR80371.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Kosmotoga olearia TBF 19.5.1] Length = 616 Score = 72.4 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 37/331 (11%), Positives = 92/331 (27%), Gaps = 44/331 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRT--TINGEVIT------------DGDISKRIA 61 + + ++++ ++ ++ + + I T++G IT + + +A Sbjct: 1 MKKFLIILVVFVLGVLGFT-----NSIIAELTVDGT-ITGVHAFQVGYDEYESALQGALA 54 Query: 62 LLKLQKI-------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + Q +L ++ L+ + + + D Sbjct: 55 NYESQGQSIDKYFGKESLPSEIQLGYSVLKVLLDRKVMAFFAMEQDVFPD-EAQVQQITD 113 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + +S E + L+ +F++ + + +N F + + + Sbjct: 114 ELVSRYISDETTRAQLEMYYGSIENFRKVVEDIVFVRTLSQNVFNAIVPDYDASATEYFE 173 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIH 227 K K EY + + +K L ++++ + Sbjct: 174 KNKTDIKNEYESVNAAHILVSTEASAMELKEKI-------LLGELSFEEAAKRYSLDQYS 226 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286 G L + +F+ + P T G I + K LK Sbjct: 227 AQQGGNIGELKHGTVILEFEEAAFAATPGEIVGPVKTDYGYHLIKVNSKTTFDSYEDLKN 286 Query: 287 -YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++ K R + IHY Sbjct: 287 SKAYEDIMSRFENEAFLGWITKYRQDKKIHY 317 >gi|87121304|ref|ZP_01077194.1| peptidyl-prolyl cis-trans isomerase D, putative [Marinomonas sp. MED121] gi|86163461|gb|EAQ64736.1| peptidyl-prolyl cis-trans isomerase D, putative [Marinomonas sp. MED121] Length = 611 Score = 72.4 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 33/265 (12%), Positives = 79/265 (29%), Gaps = 16/265 (6%) Query: 56 ISKRIALLKLQKING---ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 +RI L + + + + + LK Q ++S + + + + Sbjct: 150 FKQRIKQDILLQQGRIALSSSEFVLSNQVDQVLKLQNQQRSYDYIRYSLADEVALTQVSD 209 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 T + A + Q + DF K E+ + Sbjct: 210 TEIQAYFDENTQSFQNPEQVKLDYVIISSV--------DFHDKVNVSSAELEQ-AYQAAT 260 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSI 231 T + R I N ++ + +D + K ++++ + + Sbjct: 261 STAPKEERRASHILIEANDQRSDEEARALAQDIKSKIDSGTKFEALAKQYSDDLGSKAAG 320 Query: 232 GKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYL 288 G Y+ + P+F+N+L + + T+ G I + + D ++ L Sbjct: 321 GDLGYVSSGMMVPEFENVLFSMVVDQVSGVVETEFGYHLIELREITNVDTPSLAEMEPEL 380 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAI 313 + + K + + + A Sbjct: 381 TQEILDRKAQDALLSAQEDITDLAY 405 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 38/327 (11%), Positives = 100/327 (30%), Gaps = 24/327 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + F+++ F + + + + +S ++G IT ++ + Sbjct: 1 MLQDIRDKSQGIVVKIIIGFIVVTFALFGVDALVTGFTTSDTVAEVDGVEITRTELLQSA 60 Query: 61 ALLKLQ-------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + + Q + L++ A+ ELI + + V+ + + Sbjct: 61 EIQRRQLISMMGGQIDPALLEDTLLQRRALDELIQRAVLTNNANDLNLAVSDAQVDQYLI 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 Q + D + +L+ + + + L + +N+ Sbjct: 121 QAEQFQTDGQFDQTKYLNFIRTLGYTPLAFKQRIKQDILLQQGRIALS---SSEFVLSNQ 177 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + + +++ I+ + + ++ +++ I Sbjct: 178 VDQVLKLQNQQRSYDYIRYSLADEVALTQVSDTEIQAYFDENTQSFQNPEQVKLDYVIIS 237 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGEIALKA 286 V + ++L +Q T P ++ I D+R AL Sbjct: 238 SVDFHDKVNVSSAELEQAYQAATS------TAPKEERRASHILIEANDQRSDEEARALAQ 291 Query: 287 YLSAQN-TPTKIEKHEAEYVKKLRSNA 312 + ++ + TK E +Y L S A Sbjct: 292 DIKSKIDSGTKFEALAKQYSDDLGSKA 318 >gi|58038776|ref|YP_190740.1| peptidyl-prolyl cis-trans isomerase [Gluconobacter oxydans 621H] gi|58001190|gb|AAW60084.1| Peptidyl-prolyl cis-trans isomerase [Gluconobacter oxydans 621H] Length = 387 Score = 72.4 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 65/211 (30%), Gaps = 2/211 (0%) Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + + +LI E LK QEI K I + + + + G+ L G+ Sbjct: 22 NRMRGQIIHQLIDERLKTQEILKLHINVEPDQIAGAISNIEQRNGMPKNALRDRLASDGV 81 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + +Q W V++ + +I +Q ++ R + +F Sbjct: 82 SLTTLIDQIRVQIGWMQVLREKLGEEGRVTATQISQREQALQAEQGRPQYFMSEIFVPVA 141 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQN 248 + ++ + +F+ + G ++ E +L Sbjct: 142 DPRHDENELAFTKTI-ISQLREGAPFPIVAAQFSQAQSALDGGSMGWVQEDNLDPQVVNI 200 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + + +NP G + KR +G Sbjct: 201 VRQMPIGAISNPIQVAGGFVIATVQSKRVVG 231 Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 30/74 (40%) Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 + L N + P V+ G+ + +C+++ + ++ Q ++E+ Sbjct: 304 MPQMKAVLEALPPNKVSRPLVSMDGIALLMVCNRQQKNLAQQSPSEIADQLMNERVEQAS 363 Query: 302 AEYVKKLRSNAIIH 315 + + L+ AII Sbjct: 364 RQLQRDLQRRAIIE 377 >gi|296123565|ref|YP_003631343.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces limnophilus DSM 3776] gi|296015905|gb|ADG69144.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces limnophilus DSM 3776] Length = 415 Score = 72.4 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 30/301 (9%), Positives = 84/301 (27%), Gaps = 30/301 (9%) Query: 41 RIRTTINGEVITDGDISKRI----------------ALLKLQKINGELEKIAVQELIVET 84 ++ +NG I ++ +R LL+ I L ++LIVE Sbjct: 100 QVVARVNGAPIFASEVLERYGEVLAQAREKLPPDKFNLLRENIIAQNLRAHVERQLIVER 159 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 ++ D F + + L+ + + + Sbjct: 160 MRADMKPDQLKQLDGYLDAAFEKEMVKLKEQLKVQTKPELEYELNKRGTCLEDVRQSFQN 219 Query: 145 PDVVKNDFMLK------YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + +K ++ + + + S +Q Sbjct: 220 NRIAMEYLAVKAGKPEPINRKDLVEYYESHPEEFRLESRVKWKQIQCSF---LKSDQEQA 276 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH--PQFQNLLKKSQNN 256 + ++K A E + K++ + G + + L + L Sbjct: 277 RVKMKSALEELANGESFEDVARKYSDGVTAKEGGHWDWTQKGSLSDKKLEEILFTAKVGE 336 Query: 257 TTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 ++ + + + + + ++ G ++ + + PT+ + + ++A+I Sbjct: 337 LSDVTIIGRAYQVVFVEERESAGMRPFAEVQQEIHKKIEPTRFPNPRKI-LDAMLASAVI 395 Query: 315 H 315 Sbjct: 396 E 396 >gi|305431687|ref|ZP_07400856.1| peptidyl-prolyl cis-trans isomerase [Campylobacter coli JV20] gi|304445282|gb|EFM37926.1| peptidyl-prolyl cis-trans isomerase [Campylobacter coli JV20] Length = 273 Score = 72.4 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 96/302 (31%), Gaps = 41/302 (13%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQ 78 + +++ + +++ T+NG+ I+D ++S+ A + + +K +Q Sbjct: 4 VSLIAAALIAGVTLNLNAATIATVNGKNISDTEVSEFFAPMLRGEDFKSLPDHQKKALLQ 63 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 + I++ L Q+ +K + D Sbjct: 64 QYIMQDLILQDAKKQNLEKDPLYKKEL-------------------------------ER 92 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 A SI +V + + ++ A ++ K ++ ++ + + Sbjct: 93 AKDSILVNVYQEKILNSIKVDSSKVKAFYEQNKEKYIKPAAVQAKHILVSSEQEAKDIIK 152 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN-- 256 + + + + + K G+ + +S + F + +N Sbjct: 153 ELKGLKGKALDDNFSQLAQE--KSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTI 210 Query: 257 TTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 TT P T G I + R + +K + + +K + + L +NA + Sbjct: 211 TTTPVKTNFGYHVILKENSRAKEQIKFDDVKKGIENGLKFEEFKKVINQKGQDLLNNAKV 270 Query: 315 HY 316 Y Sbjct: 271 EY 272 >gi|221215062|ref|ZP_03588029.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans CGD1] gi|221164998|gb|EED97477.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans CGD1] Length = 644 Score = 72.4 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 22/273 (8%), Positives = 60/273 (21%), Gaps = 22/273 (8%) Query: 53 DGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 D+ + L+ Q + ++ L ++ + + + R Sbjct: 133 SIDVERYAQLMSFQGMTPEQYQERVRYSLALQQIPASIVSSAFTPKSLAQRLSELAAQQR 192 Query: 112 NTGLSAEDFSSFLDKQGIGDNH---FKQYLAIQSIWPDVVKNDF--------MLKYGNLE 160 + K D + Q P+ ++ + Sbjct: 193 EVQALVLKTGDYASKVQPTDAQLAAYYDAHKQQFATPETATIEYLVYSPAAAAASAQPTD 252 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +I E +R I + AE+ + ++ Sbjct: 253 ADIKKFYDDNPTHFRTEAQVRVSHIFIAAASDASAADKAAAKAKAEQLLADVKAHPDQFA 312 Query: 221 KFA-----SKIHDVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 + A G ++ Q + + G + Sbjct: 313 QIAEKNSQDAPSATKGGDLGFITRGSTAGGKAFDDAAFALKQGEISGVVQSDLGFHILKA 372 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAE 303 + + + +K ++A K ++ Sbjct: 373 TEVKPSIVKPFAEVKDEIAATLKQQYAAKAFSD 405 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 20/211 (9%), Positives = 54/211 (25%), Gaps = 15/211 (7%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------GELE 73 V I ++ + S +NG IT + Q E Sbjct: 26 FVGIQGFRGFFDESANVAAVNGHKITRVEFDGAFRQQIDQARQALGAQFDIKAFDTPEHR 85 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQHARNTGLSAEDFSSFLDKQGIGD 131 K + LI + + E ++ +T N V + Q + Sbjct: 86 KQVLDGLIQQRVLADETQRLHLTASDNAVREALLSDPMIASLKKPDGSIDVERYAQLMSF 145 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + + + Q++ + ++ ++ ++ D Sbjct: 146 QGMTPEQYQERVRYSLALQQIPASIVSSAFTPKSLAQRLSELAAQQREVQALVLKTGDYA 205 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q + + + + ++ Sbjct: 206 SKVQPTDAQLAAYYDAHKQQFATPETATIEY 236 >gi|170743751|ref|YP_001772406.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium sp. 4-46] gi|168198025|gb|ACA19972.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium sp. 4-46] Length = 277 Score = 72.4 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 26/241 (10%), Positives = 61/241 (25%), Gaps = 6/241 (2%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I +E++ + L E + Q D ++ Sbjct: 24 ISRAAISREVQNHPAPTPVAAWRAAALALVLREALGQEARRLGIAAQPARDAEGRRETEE 83 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 ++ +V+ + + E ++ + + + + + Sbjct: 84 EARMRALVEREVAVPAPTEEECRRYYERNPARFRTPDLFEASHILFAAARDDAAAYELAR 143 Query: 201 RIKDAE--ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257 ++ G + P F+ Sbjct: 144 LNAQMIIAMLEEDPDTFEELARLHSACPSGEVGGSLGQVTTGQTTPDFEAALRGMRPGEI 203 Query: 258 T-NPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + P T+ GV I + + D G A ++A + + +A+YV +L A I Sbjct: 204 SRAPVETRYGVHVIRLGRRLDGGTLPFEAASPRIAAYLSEALRRRAQAQYVARLLGQARI 263 Query: 315 H 315 Sbjct: 264 E 264 >gi|225027756|ref|ZP_03716948.1| hypothetical protein EUBHAL_02015 [Eubacterium hallii DSM 3353] gi|224954902|gb|EEG36111.1| hypothetical protein EUBHAL_02015 [Eubacterium hallii DSM 3353] Length = 248 Score = 72.4 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 26/282 (9%), Positives = 73/282 (25%), Gaps = 38/282 (13%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 MS +I G IT+ + ++ ++ L Q+ Sbjct: 1 MSEKIIAVSAGREITETEFNEFLSKLPEQQQ-------------------------AYVA 35 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 Q+A + D+ + + + ++ Sbjct: 36 TEEGRKQALTQYANYFLFEKLGYDKKYDQDEAFLATMEAVKRELLGQYALTQEIKDIQAT 95 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E E N+ K + + + +L + + + ++ + + Sbjct: 96 QEECEAYYNEHKAMFVKEAKATAKHILTATEEESKKVLEEIE----------SGVKTFED 145 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 +++++ G + +F + + P T G I + + Sbjct: 146 AAKEYSTCPSKAQGGSLGTFGRGQMVKEFDEAVFTAEVGKVIGPVKTDFGYHLIRVDELT 205 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + Q T K K +++ + + Sbjct: 206 GGEQSEFAEVYPQIMQQLTTEKQNKKYMAVRQEMIEKYGLEF 247 >gi|315927333|gb|EFV06677.1| PPIC-type PPIASE domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 263 Score = 72.4 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 34/292 (11%), Positives = 91/292 (31%), Gaps = 35/292 (11%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 +++ +++ T+NG+ I+D ++S+ A + + L + LI + + + Sbjct: 1 MIAGVVLNVNAATVATVNGKSISDTEVSEFFAPMLRGQDFKTLPDNQKKALIQQYIMQDL 60 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 I + + + A +I +V + Sbjct: 61 ILQDAKKQNLEKDP---------------------------LYTKELDRAKDAILVNVYQ 93 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + ++ A + K+ V+ ++ + K + + +E Sbjct: 94 EKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGLKGKELD 153 Query: 210 LRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVTQKG 266 + ++ + G+ + +S + F + +N TT P T G Sbjct: 154 AKFS---ELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTNFG 210 Query: 267 VEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + + +K + + +K + + L ++A + Y Sbjct: 211 YHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEY 262 >gi|307352353|ref|YP_003893404.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methanoplanus petrolearius DSM 11571] gi|307155586|gb|ADN34966.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methanoplanus petrolearius DSM 11571] Length = 93 Score = 72.4 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 1/79 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNT 257 +K KD +K+++ G + + + +F++ + Sbjct: 15 EKEAKDILAKLNSGENFEELAKKYSTCPSGRKGGDLGWFGKGMMVKEFEDASFSAKDGDV 74 Query: 258 TNPYVTQKGVEYIAICDKR 276 T P TQ G I I + Sbjct: 75 TGPVKTQFGYHIIKITGNK 93 >gi|301169728|emb|CBW29329.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Haemophilus influenzae 10810] Length = 622 Score = 72.4 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 47/395 (11%), Positives = 110/395 (27%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + I + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLTNSKISKFILGLIAVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 AL---LKLQKINGE-------------LEKIAVQELIV-----------------ETLKK 87 ++ Q+ L + V +I E +K+ Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 VK D M K + EI + + V+ ++ Sbjct: 181 VKNSAEIFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 185 ------------------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + Q ++ K A E + + + Sbjct: 241 ADNISRNLQVTDVEIAQYYQDNKAQFMTQHLAHIQFANEQDAKVAYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ E++L F++ + P + + +++ Sbjct: 301 AKSLDKISGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA ++ + +E K+ A Sbjct: 360 QSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394 >gi|307546074|ref|YP_003898553.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halomonas elongata DSM 2581] gi|307218098|emb|CBV43368.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halomonas elongata DSM 2581] Length = 213 Score = 72.4 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 24/197 (12%), Positives = 71/197 (36%), Gaps = 8/197 (4%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEKIA 76 V +++ + RI +N I + + +R+A + Q + L + Sbjct: 17 LAPVGVMAQDARQPLDRIVAVVNEGAIMNSQLEERVARTRAQMEAQGVEVPPDDVLRQQV 76 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + L++E ++ Q ++ ++ D +N A+N ++ E F+ L+ G+ + Sbjct: 77 LDRLVIEEIQLQMAREANLSVDDTELNRQVRAIAQNNDMTLEQFADALEADGLSLGVVRD 136 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + + + + + E E+ ++ E + + +++++ Sbjct: 137 QVRRELLMRQIQQRRVGSRVSISEAEVNRFIEQQGGNVTAEQARQALFQRKANDEMEAWV 196 Query: 197 FVQKRIKDAEESRLRLP 213 + +E Sbjct: 197 QEIRSQAFVDERLGSGS 213 >gi|260580093|ref|ZP_05847923.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae RdAW] gi|260093377|gb|EEW77310.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae RdAW] Length = 622 Score = 72.4 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 47/395 (11%), Positives = 110/395 (27%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + I + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLTNSKISKFILGLIAVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 AL---LKLQKINGE-------------LEKIAVQELIV-----------------ETLKK 87 ++ Q+ L + V +I E +K+ Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 VK D M K + EI + + V+ ++ Sbjct: 181 VKNSAEVFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 185 ------------------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + Q ++ K A E + + + Sbjct: 241 ADNISRNLQVTDVEIAQYYQDNKAQFMTQHLAHIQFANEQDAKVAYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ E++L F++ + P + + +++ Sbjct: 301 AKSLDKISGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA ++ + +E K+ A Sbjct: 360 QSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394 >gi|315283321|ref|ZP_07871537.1| foldase protein PrsA [Listeria marthii FSL S4-120] gi|313613042|gb|EFR86968.1| foldase protein PrsA [Listeria marthii FSL S4-120] Length = 292 Score = 72.0 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 29/304 (9%), Positives = 86/304 (28%), Gaps = 40/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + ++ + S + + T + +T ++ + + Sbjct: 1 MKKKLILGLVMVMALFSLAACGGGGNVVKT-DSGDVTKDELYDAMK--------DKYGSE 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 VQ+L E + + + S D + + + Sbjct: 52 FVQQLTFEKVLSDKYKVSDEDVD------------KKFNEYKSQYGDQFSAVLAQSGLTE 99 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + +V+ + + + + Sbjct: 100 KSFKSQLKYNMLVQKATEANTDTSDKALKEYYKT---------------WQPDITVSHIL 144 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--K 252 + + K+ E+ K + +++++ + GK + + P F+ K Sbjct: 145 VADENKAKEVEQKLKDGAKFADLAKEYSTDTATKENGGKLEPFGPGKMDPAFEKAAYALK 204 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKKLRSN 311 ++ + + P TQ G I + + K + ++ + +KK+ + Sbjct: 205 NKGDISAPVKTQYGYHIIQMDEPATKTTFDKDKKAVKESYLQSQLTTENMQKTLKKVYKD 264 Query: 312 AIIH 315 A + Sbjct: 265 ANVK 268 >gi|83646714|ref|YP_435149.1| parvulin-like peptidyl-prolyl isomerase [Hahella chejuensis KCTC 2396] gi|83634757|gb|ABC30724.1| Parvulin-like peptidyl-prolyl isomerase [Hahella chejuensis KCTC 2396] Length = 255 Score = 72.0 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 35/278 (12%), Positives = 90/278 (32%), Gaps = 46/278 (16%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 +NG I++ + + + + L + A ++ E L+++ Sbjct: 7 VNGVAISETAMFQEMQYFPSESQEDALNQAARALIVSELLRQRAQA-------------- 52 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + + + I + + + + E E Sbjct: 53 ------------------------LEMETEGLSQDEVIDLLLQREAPVREPTAEECERFY 88 Query: 166 NKQKMKNITVREYLIRTVL-FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + + +L + PD+ + +++ E + + + +KF++ Sbjct: 89 RGHPEQFSSSPLVEANHILLAAAPDDVKERSLKLEQAKALIERLQSNPEQFASLAQKFSA 148 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 G L +F+ + + + +P ++ GV + + KR++ GE+A Sbjct: 149 CPSKDQGGSLGQLSRGQTVAEFEAAVFRHEYGLIPSPVESRYGVHVVWV--KRNIPGELA 206 Query: 284 LKAYLSAQNTPTKIE----KHEAEYVKKLRSNAIIHYY 317 +Y+ + E + +Y+ +L A IH Y Sbjct: 207 PYSYVEEKLRSYLKELAERRAIVDYLHRLVEAAEIHGY 244 >gi|161524527|ref|YP_001579539.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans ATCC 17616] gi|189350717|ref|YP_001946345.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia multivorans ATCC 17616] gi|160341956|gb|ABX15042.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans ATCC 17616] gi|189334739|dbj|BAG43809.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia multivorans ATCC 17616] Length = 644 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 23/273 (8%), Positives = 61/273 (22%), Gaps = 22/273 (8%) Query: 53 DGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 D+ + L+ Q + ++ L ++ + + + R Sbjct: 133 SIDVERYAQLMSFQGMTPEQYQERVRYSLALQQIPASIVSSAFTPKSLAQRLSELAAQQR 192 Query: 112 NTGLSAEDFSSFLDKQGIGDNH---FKQYLAIQSIWPDVVKNDF--------MLKYGNLE 160 S + K D + Q P+ ++ + Sbjct: 193 EVQALVLKTSDYASKVQPTDAQLAAYYDAHKQQFATPETATIEYLVYSPAAAAASAQPTD 252 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +I E +R I + AE+ + ++ Sbjct: 253 ADIKKFYDDNPTHFRTEAQVRVSHIFIAAASDASAADKAAAKAKAEQLLADVKAHPDQFA 312 Query: 221 KFA-----SKIHDVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 + A G ++ Q + + G + Sbjct: 313 QIAEKNSQDAPSAAKGGDLGFITRGSTAGGKAFDDAAFALKQGEISGVVQSDLGFHILKA 372 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAE 303 + + + +K ++A K ++ Sbjct: 373 TEVKPSIVKPFAEVKDEIAATLKQQYAAKAFSD 405 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 20/211 (9%), Positives = 54/211 (25%), Gaps = 15/211 (7%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------GELE 73 V I ++ + S +NG IT + Q E Sbjct: 26 FVGIQGFRGFFDESANVAAVNGHKITRVEFDGAFRQQIDQARQALGAQFDIKAFDTPEHR 85 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQHARNTGLSAEDFSSFLDKQGIGD 131 K + LI + + E ++ +T N V + Q + Sbjct: 86 KQVLDGLIQQRVLADETQRLHLTASDNAVREALLSDPMIASLKKPDGSIDVERYAQLMSF 145 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + + + Q++ + ++ ++ ++ D Sbjct: 146 QGMTPEQYQERVRYSLALQQIPASIVSSAFTPKSLAQRLSELAAQQREVQALVLKTSDYA 205 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q + + + + ++ Sbjct: 206 SKVQPTDAQLAAYYDAHKQQFATPETATIEY 236 >gi|313632264|gb|EFR99323.1| foldase protein PrsA [Listeria seeligeri FSL N1-067] Length = 295 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 89/304 (29%), Gaps = 40/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + ++ + S + S + T G+ +T ++ + + + Sbjct: 1 MKKKMILGLVMLMAMFSLAACGGGSDVVKTDAGD-VTQDELYEAMK--------DKYGNE 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 VQ+L E + + + + DS + D + Sbjct: 52 FVQQLTFEKILGDKYKVTDEQVDSE------------FKKYKSQYGDQFDAVLAQSGLTE 99 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + +V+ + + + + Sbjct: 100 ETFKSQLKYNMLVQKATEANTDTSDKALKEYYKT---------------WQPDITVSHIL 144 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--K 252 + + K+ E+ K + +++++ + GK + P F+ K Sbjct: 145 VADEAKAKEVEQKLKDGEKFADLAKEYSTDTATKDNGGKLAPFGPGKMDPAFEKAAYALK 204 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKKLRSN 311 ++ + ++P TQ G I + + K + ++ + +KK + Sbjct: 205 NKGDISDPVKTQYGYHIIQMDEPATKTTFDKDKKAVKESYLQSQLTTENMQKTLKKEYKD 264 Query: 312 AIIH 315 A + Sbjct: 265 ANVK 268 >gi|301168101|emb|CBW27687.1| putative peptidyl-prolyl cis-trans isomerase [Bacteriovorax marinus SJ] Length = 495 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 44/362 (12%), Positives = 96/362 (26%), Gaps = 64/362 (17%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA------------ 61 + T F+ +I Y+S S + E I + + Sbjct: 13 NIFVTIFIGLIVISFMFTGYQSLTTSPNSVAKVGDEFIKVEEYQREYNRQLEFFRNILGG 72 Query: 62 --LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTGLS 116 L Q +++ A+ L+ L +K G+ S + N S Sbjct: 73 KDLTTQQIQQFRIKETALSNLVQLKLTLILGDKVGVIPSSEEIKTEIKRQPYFQVNGQFS 132 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSI--------------------WPDVVKNDFMLKY 156 + L + F++ + Q + Sbjct: 133 INRYKDLLAANRMNPAQFEESIKDQVRGMNSDAIFTSMPISESYLKDVENFRSQKIEANI 192 Query: 157 GNLEMEIPANKQKMKNITVREY----LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 ++ E K + N + +Y + S+ + + ++ + Sbjct: 193 IEIDKEALRKKLTISNDEITKYLADETNANRVQSLFNERKPTLDQKEEVKARHILFKTDG 252 Query: 213 PKDCNKLEKF--------------------ASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 D KL+ + + G ++ + P+F+ + + Sbjct: 253 KNDKQKLKAITTLRGKLTKSNFISQAKQHTEEEAGKSTGGDLRWFTRGAMVPEFEKVAFE 312 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + P T G I + DK++ A Q I K + + V+ + + Sbjct: 313 LKPGTISRPVKTPFGYHIIYVEDKKEAK--EATLEEFKNQLASELIRKTKNDEVEAMATE 370 Query: 312 AI 313 A Sbjct: 371 AK 372 >gi|221198210|ref|ZP_03571256.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans CGD2M] gi|221209208|ref|ZP_03582200.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans CGD2] gi|221170946|gb|EEE03401.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans CGD2] gi|221182142|gb|EEE14543.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans CGD2M] Length = 644 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 24/273 (8%), Positives = 61/273 (22%), Gaps = 22/273 (8%) Query: 53 DGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 D+ + L+ Q + ++ L ++ + + + R Sbjct: 133 SIDVERYAQLMSFQGMTPEQYQERVRYSLALQQIPASIVSSAFTPKSLAQRLSELAAQQR 192 Query: 112 NTGLSAEDFSSFLDKQGIGDNH---FKQYLAIQSIWPDVVKNDF--------MLKYGNLE 160 S + K D + Q P+ ++ + Sbjct: 193 EVQALVLKTSDYASKVQPTDAQLAAYYDAHKQQFATPETATIEYLVYSPAAAAASAQPTD 252 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +I E +R I + AE+ + ++ Sbjct: 253 ADIKKFYDDNPTHFRTEAQVRVSHIFIAAASDASAADKAAAKAKAEQLLADVKARPDQFA 312 Query: 221 KFA-----SKIHDVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 + A G ++ Q + + G + Sbjct: 313 QIAEKNSQDAPSAAKGGDLGFITRGSTAGGKAFDDAAFALKQGEISGVVQSDLGFHILKA 372 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAE 303 D + + +K ++A K ++ Sbjct: 373 TDVKPSIVKPFAEVKDEIAATLKQQYAAKAFSD 405 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 19/211 (9%), Positives = 54/211 (25%), Gaps = 15/211 (7%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------GELE 73 V I ++ + S +NG IT + Q + Sbjct: 26 FVGIQGFRGFFDESANVAAVNGHKITRVEFDGAFRQQIDQARQALGAQFDIKAFDTPDHR 85 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQHARNTGLSAEDFSSFLDKQGIGD 131 K + LI + + E ++ +T N V + Q + Sbjct: 86 KQVLDGLIQQRVLADETQRLHLTASDNAVREALLSDPMIASLKKPDGSIDVERYAQLMSF 145 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + + + Q++ + ++ ++ ++ D Sbjct: 146 QGMTPEQYQERVRYSLALQQIPASIVSSAFTPKSLAQRLSELAAQQREVQALVLKTSDYA 205 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q + + + + ++ Sbjct: 206 SKVQPTDAQLAAYYDAHKQQFATPETATIEY 236 >gi|15837793|ref|NP_298481.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa 9a5c] gi|9106161|gb|AAF84001.1|AE003953_5 peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa 9a5c] Length = 655 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 23/268 (8%), Positives = 69/268 (25%), Gaps = 19/268 (7%) Query: 57 SKRIALLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 R LL Q+ ++ + V+ ++ ++ I SG ++ + Sbjct: 152 QDRYRLLLAQEPTMRTPQMYENYVRSMMQLSMIPSTIFDSGFVPNTELERILVLLGQTRN 211 Query: 114 GLS---AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF---------MLKYGNLEM 161 + + + P+ + ++ + Sbjct: 212 AELVTLPALKLDMAEISDMQIKEWYAAHRDDFRQPETLSFEYVDLDAAHLPRPTPSEAVL 271 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + Q+ + +L + + + K K EE+R Sbjct: 272 RKRYDAQQRGEAQNEQRKAAHILITAGADAASQKVAEAKAAKLVEEARKPGVDFAALARI 331 Query: 222 FASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + + G ++ + F+++ P T+ G I + + + Sbjct: 332 NSQDPGSKDAGGDLGWVQRGMMVKPFEDVLFAMKVGEVVGPIKTEFGNHVIKLEEIK--A 389 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + Q + ++ + Sbjct: 390 AKQLPFEAVRDQLAAEQTKEDIDKEFND 417 >gi|300114915|ref|YP_003761490.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus watsonii C-113] gi|299540852|gb|ADJ29169.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus watsonii C-113] Length = 304 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 25/312 (8%), Positives = 79/312 (25%), Gaps = 34/312 (10%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70 F +T+ +L ++ + V+T D + + Q Sbjct: 4 GFKSGITSILILSALVAFGA---RAAEPEEEVLIRYKDIVVTAADFQAELETIPEQ---- 56 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 ++ I ++ + L+ E L++ Sbjct: 57 --------------------YRANIAASGERIHQLLDKIFTYRVLAKEAQEQGLEQNPEV 96 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI--PANKQKMKNITVREYLIRTVLFSIP 188 K + + N + E Q + ++ I Sbjct: 97 QQELKLEKEEILGKARLRQLRQQALADNPDFEALARERYQANPEKYQQPERVKVSHILIK 156 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQ 247 + + + + + + +++ + + G ++ + F+ Sbjct: 157 PEERSEEEARELAEQVRQLALTDEKPFSELALQYSEDPSLEKNKGDLGFIAKGMTTQSFE 216 Query: 248 NLLK--KSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAE 303 + + ++ G I + +++ +K L T + + Sbjct: 217 EAAFALEQPGAISPVVKSRFGFHIIRLEERQAPKTKSFAEVKESLVEDIKATHLNQVVQT 276 Query: 304 YVKKLRSNAIIH 315 ++ ++R+ I Sbjct: 277 HLNQIRNAEGIQ 288 >gi|187923900|ref|YP_001895542.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia phytofirmans PsJN] gi|187715094|gb|ACD16318.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia phytofirmans PsJN] Length = 645 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 26/271 (9%), Positives = 66/271 (24%), Gaps = 22/271 (8%) Query: 55 DISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 D+ + LL +Q + ++ + + L + + + R Sbjct: 135 DVDRYKQLLAMQGMTPDQYDERVRYSIATQQLPASIQGSAFTSKTLAQHLTELAEQQREV 194 Query: 114 GLSAEDFSSFLDKQGIGDNH---FKQYLAIQSIWPDVVKNDFM--------LKYGNLEME 162 A + K D + + P ++ + + Sbjct: 195 QGIAFHPRDYAAKVQPTDAQLQAYYDAHRNEFATPATATIQYVVMSPATLAASAQPSDAD 254 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + +R I K + K + AEE ++ ++ + Sbjct: 255 LKKYYDDNIAHYRTDGQVRASHILIAAPKDASAADKAKAKQKAEELLAQIKAHPDQFAQI 314 Query: 223 ASKIH-----DVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274 A + G Y + + ++ + T G + + D Sbjct: 315 AQQNSQDPGSASKGGDLGYFGRGMIAGGKAFDDAVFALKKDEVSGIVQTDFGYHIVKVTD 374 Query: 275 KRDL--GGEIALKAYLSAQNTPTKIEKHEAE 303 + +K +S K + Sbjct: 375 VKPAVTKPFDEVKDQISKDLKAQLASKAFTD 405 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/228 (8%), Positives = 57/228 (25%), Gaps = 15/228 (6%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 + + ++ V I ++ + S ++NG IT + + + Sbjct: 9 KRLMMFMLILVIVPGLGFVGIQGFRGFFDESANVASVNGHKITRAEYDDAMRQQLDRARQ 68 Query: 70 -------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--QHARNTG 114 E + LI + + E ++ +T + V + + Sbjct: 69 MLGAQFDMKSFDTPERRAQMLDGLIEQRVLADETQRLHLTASDDAVRRVLMSDPVISSLK 128 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 KQ + + + + Q + + Sbjct: 129 NPDGTIDVDRYKQLLAMQGMTPDQYDERVRYSIATQQLPASIQGSAFTSKTLAQHLTELA 188 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++ ++ + F D + Q + + R ++ Sbjct: 189 EQQREVQGIAFHPRDYAAKVQPTDAQLQAYYDAHRNEFATPATATIQY 236 >gi|300311549|ref|YP_003775641.1| peptidyl-prolyl cis-trans isomerase D [Herbaspirillum seropedicae SmR1] gi|300074334|gb|ADJ63733.1| peptidyl-prolyl cis-trans isomerase D protein [Herbaspirillum seropedicae SmR1] Length = 639 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 75/249 (30%), Gaps = 14/249 (5%) Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++AVQ+L K+ S + N + L + + D Sbjct: 155 REMAVQQLNAAIQTTAFAPKTVAENLSALNDQERTVQMLNFKPDSYASQVKLSDEMLKDY 214 Query: 133 HFKQYLAIQSIWPDVVK------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + K ++ ++ + + +I A ++ K + E R Sbjct: 215 YDKNSARFETPEQADIEYVVLDAAAVAAQAAVTDDDIKAYYEQNKKLYATEEQRRASHIL 274 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESD 241 I K + AE +L K+ + K A + G Y + Sbjct: 275 IAVKKDASAADQAAAKSKAEGLVAQLRKNPGEFAKLAKANSQDPGSAENGGDLGYFGKGA 334 Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIE 298 + F++ Q ++P + G I + + + ++KA + ++ Sbjct: 335 MVKPFEDAAFSLKQGEISDPVQSDFGYHIIEVTGIKPAAVKPLESVKAEIGSEIKKQIAA 394 Query: 299 KHEAEYVKK 307 K +E + Sbjct: 395 KKYSEMADQ 403 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 44/164 (26%), Gaps = 19/164 (11%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T ++ L F+ F + Y + + G+ IT + Sbjct: 1 MFDFIRTH-QRLMQFLLLLFIFPSFAFFGLEGYSRLTDDNG-VAKVAGQTITKEEWDAAH 58 Query: 61 ALLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + + + + LI + E+ S + + + Sbjct: 59 RQQLERMRQVYGNQFDSKIFDSPQARRAILDNLIAQRALGAEVVASKLVVPDQVLQQSIL 118 Query: 108 Q----HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 Q + E + L QG+ ++ L + + Sbjct: 119 QIPGLTKADGKFDNEQYRVLLAAQGMTPKSYEAGLRREMAVQQL 162 >gi|225628752|ref|ZP_03786786.1| Chaperone surA precursor [Brucella ceti str. Cudo] gi|260167067|ref|ZP_05753878.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella sp. F5/99] gi|261756460|ref|ZP_06000169.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella sp. F5/99] gi|225616598|gb|EEH13646.1| Chaperone surA precursor [Brucella ceti str. Cudo] gi|261736444|gb|EEY24440.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella sp. F5/99] Length = 311 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 30/280 (10%), Positives = 77/280 (27%), Gaps = 40/280 (14%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG I + DI + L A + E L ++ Sbjct: 51 AVSVNGVTIDEADILTEAQNHPAENPGAALLSAARALAVRELLLQRAR------------ 98 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 ++ + D + ++ V++ + + E Sbjct: 99 ------------------EIGIEPEHEKDAEGRAETDEDALVRMVIEREVDV-PSASRDE 139 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220 + ++ ++ I + + R + + + Sbjct: 140 AQRYYENNRHRFTSAPILEASHILIAADPADQETRDAARQTATRLAAAVIAEPATFASVA 199 Query: 221 -KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN--PYVTQKGVEYIAICDKR- 276 +++S G L P+F+ L++ T P + G + + D+R Sbjct: 200 LEYSSCPSGAQGGNLGQLTRGSTVPEFERALERMTPGETTANPIENRFGYHIVRL-DRRV 258 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ + K ++Y+ L + A I Sbjct: 259 EGEELPFDYVADKIAGWLEASTWSKAVSQYIAILAAEAEI 298 >gi|300871204|ref|YP_003786077.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brachyspira pilosicoli 95/1000] gi|300688905|gb|ADK31576.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brachyspira pilosicoli 95/1000] Length = 295 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 90/294 (30%), Gaps = 18/294 (6%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKI---NGELEKIAVQELIVETLKKQEIEKSGIT 96 + I + IT D R + L LQ + + ++L+ E + ++++ Sbjct: 3 NSIVGVVGSIPITYEDFVSRKSFLSLQARSIGKKINDDMVYKDLVEERIMYLKLKEYNYV 62 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML-K 155 + N V+ A L+ + F+ L +GI + ++ + Q ++ + Sbjct: 63 IEENDVSRRLENIANQYNLTLDQFAKQLKAEGISYDEYRNSIKKQIAMENLSGLVVNNTE 122 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + E + N K K + L++ +G Q+ R Sbjct: 123 ITDAEADEYYNNSKDKTAFEVDTLVKLSWIFFKATTFTEKGEKQELADKVRGMAARGNDF 182 Query: 216 CNKLEKFASKIHDVS-IGKAQYL-----LESDLHPQFQ-----NLLKKSQNNTTNPYV-T 263 +K++ + G Y + L Q ++ Sbjct: 183 AELAKKYSDDEKTKNYGGDLGYNLLYDAGKRSLPAQVNAGLTLAKRGYKVGTVSSVRELV 242 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 KG + I + + +++ + + ++ +++ I Y Sbjct: 243 GKGFYIVKIVEIQ--KDMDSIRTRVKNYLSEIRMRDSFVKWLDDETKRVTIKLY 294 >gi|270339925|ref|ZP_06006472.2| peptidyl-prolyl cis-trans isomerase [Prevotella bergensis DSM 17361] gi|270333285|gb|EFA44071.1| peptidyl-prolyl cis-trans isomerase [Prevotella bergensis DSM 17361] Length = 483 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 29/247 (11%), Positives = 66/247 (26%), Gaps = 12/247 (4%) Query: 47 NGEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 E I DI + + + + ++L V+ L + I + V Sbjct: 66 GDEPILRSDIEMMRMQGMAEGISWGSNPDCAIPEQLAVQKLFLHQAAIDSIEVSESEVAS 125 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK---NDFMLKYGNLEM 161 Q R +A + + N + L +++ + Sbjct: 126 GVEQQIRRWIETAGGQEKLEEYRKQSVNEMRMSLHDDFKNQQLIQKMKQKLVEDIKVSPA 185 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK----DCN 217 ++ + + ++ + I + Q + + R+ Sbjct: 186 DVRRFFRSLPQDSIPFVPTEVEVQVIERSPKIKQEEINRVKDLLRSYTDRVTNGEITFAT 245 Query: 218 KLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQN--NTTNPYVTQKGVEYIAICD 274 ++ G+ Y+ L P F N+ + + T G I + D Sbjct: 246 LARLYSEDPVSARVGGEMDYIGRGLLDPAFANVAFNLTDPKKISKIVETDFGFHIIQLID 305 Query: 275 KRDLGGE 281 KR + Sbjct: 306 KRGDKIK 312 >gi|209521454|ref|ZP_03270162.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. H160] gi|209498110|gb|EDZ98257.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. H160] Length = 644 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 27/263 (10%), Positives = 68/263 (25%), Gaps = 17/263 (6%) Query: 52 TDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 T +R+ L +Q++ +E A +TL + E + + + + +A Sbjct: 149 TPDQYDERVRYNLAMQQLPASIEASAFTS---KTLAQHLTELAQQQREVQGIAFHPHDYA 205 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + ++ D + + ++ Sbjct: 206 AKVQPTDAQLQAYYDAHRNDFATPATATIQYLVMSP---ATLSASMQPSDADLKKYYDDN 262 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH--- 227 E +R I K + K + AEE ++ ++ + A + Sbjct: 263 IAHFRTEGEVRASHILIAAPKDASAADKAKAKQTAEELLAQVKAHPDQFAQIAQQNSQDP 322 Query: 228 --DVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGG 280 G Y + ++ + + G I + D + Sbjct: 323 GSASKGGDLGYFGRGMIAGGQAFDDAAFALKKDEISGIVQSDFGFHIIKVTDVKPTVTKS 382 Query: 281 EIALKAYLSAQNTPTKIEKHEAE 303 +K ++ + K + Sbjct: 383 FDEVKDQIAKELKTQLATKAFTD 405 Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 21/237 (8%), Positives = 62/237 (26%), Gaps = 16/237 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M T + + +L V I ++ + + ++NG IT + + Sbjct: 1 MLDFFRTH-QRLMMFMLILVILPGLGFVGIQGFRGFFDENANVASVNGHKITRVEYDDAM 59 Query: 61 ALLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + E ++ + +I + + E ++ +T + V + Sbjct: 60 RQQLDRGRQMLGAQFDMKSFDTPERRRMMLDGMIEQRVLADETQRLHLTASDDAVRRTLM 119 Query: 108 --QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + KQ + + + ++ Sbjct: 120 SDPVISSLKNPDGSIDLDRYKQLLAMQGMTPDQYDERVRYNLAMQQLPASIEASAFTSKT 179 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 Q + + ++ ++ + F D + Q + + R ++ Sbjct: 180 LAQHLTELAQQQREVQGIAFHPHDYAAKVQPTDAQLQAYYDAHRNDFATPATATIQY 236 >gi|319654925|ref|ZP_08008999.1| hypothetical protein HMPREF1013_05621 [Bacillus sp. 2_A_57_CT2] gi|317393350|gb|EFV74114.1| hypothetical protein HMPREF1013_05621 [Bacillus sp. 2_A_57_CT2] Length = 288 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 86/309 (27%), Gaps = 38/309 (12%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 ++ VL+ + + +K + G+ IT + + + K Sbjct: 8 MIIAGLVLLNLITLAFLLFKGDGSGEA-VAKVGGDKITRQEWMSEMET--------KYGK 58 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + ELI + + ++ EK G+ V+ G + D Sbjct: 59 STLSELIDQKVIEEAGEKYGVKVSEKAVDLELKMVKTMYGGN------------FTDEMS 106 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + Q +++ E E+ + ++ + + + Sbjct: 107 EDKWRRQIKNNLILEELLTADVSVSEEEMKSYYEQNSSQFQVPDTYHISQIIVKTKEEAE 166 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD---LHPQFQNLL 250 Q + + + G A Y+ E D F+ + Sbjct: 167 QTLKE---------LDEGSSFSVLAMERSIDEFTASLGGNAGYVSEDDEHIPAEVFEQVK 217 Query: 251 KKSQNNTTNPYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 T P T+ G + + + K + +K+ + Q +++ + K Sbjct: 218 TLKPGKWTKPIKTENGYAVVMLHEHLKGENYSFKEVKSMIRRQIALEQMDVPVSA--KPF 275 Query: 309 RSNAIIHYY 317 A + ++ Sbjct: 276 WKEAEVEWF 284 >gi|301165392|emb|CBW24963.1| putative chaperone SurA precursor (peptidyl-prolyl cis-trans isomerase) [Bacteriovorax marinus SJ] Length = 303 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 85/307 (27%), Gaps = 20/307 (6%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL--------E 73 LI I S + + N VIT I + + ++ L Sbjct: 4 LIFLIIFLTFSQTHAKLLDKTAAVFNDTVITLSQIERIQNNIASRRNISPLIYKKQKYTN 63 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++ +I L ++++ + G + V + GLS SFL + + Sbjct: 64 SEILELMIERLLIREKLSEIGYIRNDEQVEAEINNIEKRLGLSRSQLLSFLKSNNMSFDE 123 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + + + + E+ K + V D L+ Sbjct: 124 YFEIIRETIEFNIFNGRVIRPLISITDQEVKNYFYKTSKDKTLAFKYTIV-----DFSLE 178 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKK 252 + + + + + + F +V + E L + L Sbjct: 179 ETKMKKGMLNIFPATLEKFQVNGVLPKNFEDVQTNV----LGDITEDGLTNNLKALLKNT 234 Query: 253 SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + T P + K + + K + + + + + + K+ +S Sbjct: 235 DEGKFTKPIKLGDTYHVFFVKKKDLVESEIYLRAKDQIKGKLMGEQAGEVTSLWYKRAKS 294 Query: 311 NAIIHYY 317 I + Sbjct: 295 KHYIKTF 301 >gi|167647829|ref|YP_001685492.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caulobacter sp. K31] gi|167350259|gb|ABZ72994.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caulobacter sp. K31] Length = 372 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 23/238 (9%), Positives = 62/238 (26%), Gaps = 6/238 (2%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I E L +E + + A L L + D ++ Sbjct: 16 IPEFLIAEEAQNHPSLSVAEARRAAGKALAVRALLLHRADELGLRPEPEHDEAGREETDE 75 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 +++ V+ + ++ + E+ + T + + P + + Sbjct: 76 EALIRAVLDEEIDIETPSTELCRRIYDTQRSRFTSPALVEAAHILIAPQGEEDAHWEAAR 135 Query: 201 --RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNT 257 + + + + + +S G L D+ + + L Sbjct: 136 LTAVDAVKTLTRQPGQFAALAKALSSCPSAEVGGSLGQLGPGDVVSEIEQALTALRPGQV 195 Query: 258 TN-PYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + P ++ G + + + + ++ + YV L A Sbjct: 196 LDQPVRSRFGWHVLKLDRRIEGRELPFDYVEDKIRLHLESRAWTAAATRYVSDLADRA 253 >gi|320449245|ref|YP_004201341.1| peptidyl-prolyl cis-trans isomerase, PpiC family [Thermus scotoductus SA-01] gi|320149414|gb|ADW20792.1| peptidyl-prolyl cis-trans isomerase, PpiC family [Thermus scotoductus SA-01] Length = 605 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 26/330 (7%), Positives = 73/330 (22%), Gaps = 29/330 (8%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSS---RIRTTINGEVITDGDISK-RIA 61 +S + + + F + I+ + A + +NG+ + + D+ + + Sbjct: 1 MFGISKKAITILFGLLALAFAVGAILLFTPQAGQQARGKPVLWVNGKAVYELDLLRLQGN 60 Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 L K V +E + E K + R Sbjct: 61 DPLYAANPQGLLKTLVDTHFLEQVILTEALKQDAARIRVGSAEVRKEVDRIREQFGLKEK 120 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKND---FMLKYGNLEMEIPANKQKMKNITVREY 178 ++ + L + ++ E+ + + E Sbjct: 121 KAYEQFLNQVGYTDAQLRSEIKTQLQIQKRLEQIRSAAKPTPEEVRFYFEVHQEDYKGEP 180 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 ++ K + ++++ + G Sbjct: 181 RLKARQIV---------VDEAKLAAELLAKAKAGEDFAALAKQYSK-VGAEQGGALGAGP 230 Query: 239 ESDLHPQF----------QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG--EIALKA 286 + + + P + + + +K Sbjct: 231 GESEPKPVTKVVFPDKVAEAVFAQKGPGLVGPVEAGGRYYLVKVEEYLPAKVPTFEEIKE 290 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K Y++ LR A + + Sbjct: 291 QVEKDAQAAKGNGALEAYLENLRQKAQVRF 320 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 22/293 (7%), Positives = 66/293 (22%), Gaps = 31/293 (10%) Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 T +I +++ + ++ L K Q F + V Sbjct: 284 TFEEIKEQVEKDAQAAKGNGALEAYLENL---RQKAQVRFAEDSPFSYKNLPVAKVNEQE 340 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 + LA+Q P +++ + + Sbjct: 341 ILLAQVLQPVFSNQQTAALIQQGLGDLAVQFFLPQTLESLIERELLVEAAKKSGKPFIGS 400 Query: 172 NITVREYLIRTVLFSIPDNKLQN---QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + + + + + + + + + A + Sbjct: 401 KDQIAQAYLLYETRGLTATEEEARRFYAENPALFTIPASAEVTGVVFKAEAKAKAFREAA 460 Query: 229 VSIGKA--------------QYLLESDLHPQF--------QNLLKKSQNNTTNPYVTQKG 266 + G + + L + K + + G Sbjct: 461 LRGGDLQALAKAQEGTVTEYGTVSPNQLPAVLDRLVFKVKETFPKGPMGEVSEVVKLEDG 520 Query: 267 -VEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + +++ + + +K ++ V++LR A I Sbjct: 521 TFAVLLVKNRKPEVLKPFNEVVEEAKERVILSKRQQKGQALVQELRKAAKIEN 573 >gi|296157831|ref|ZP_06840665.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. Ch1-1] gi|295892077|gb|EFG71861.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. Ch1-1] Length = 645 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 26/263 (9%), Positives = 67/263 (25%), Gaps = 17/263 (6%) Query: 52 TDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 T +R+ + Q++ ++ A +TL + E + + + + +A Sbjct: 149 TPDQYDERVRYSIATQQLPASIQGSAFTS---KTLAQHLTELAEQQREVQGIAFHPRDYA 205 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + ++ D + + ++ Sbjct: 206 AKVQPTDAQLQAYYDAHRNDFATPATATIQYLVMSP---ATLATSVQPSDADLKKYYDDN 262 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH--- 227 E +R I K + K + AEE ++ ++ + A + Sbjct: 263 IAHYRVEGQVRASHILIAAPKDASAADKAKAKQKAEELLAQIKAHPDQFAQLAQQNSQDP 322 Query: 228 --DVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GG 280 G Y + + ++ + T G + + D + Sbjct: 323 GSASKGGDLGYFGRGMIAGGQAFDDAVFALKKDEVSGIVQTDFGYHIVKVTDVKPAITKP 382 Query: 281 EIALKAYLSAQNTPTKIEKHEAE 303 +K +S K + Sbjct: 383 FDEVKDQISKDLKTQLASKAFTD 405 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 20/228 (8%), Positives = 56/228 (24%), Gaps = 15/228 (6%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 + + ++ V I ++ + S ++NG IT + + + Sbjct: 9 KRLMMFMLILVIVPGLGFVGIQGFRGFFDESANVASVNGHKITRAEYDDAMRQQLDRARQ 68 Query: 70 -------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQHARNTG 114 E + LI + + E ++ +T + V + Sbjct: 69 MLGAQFDMKSFDTPERRSQMLDGLIEQRVLADETQRLHLTASDDAVRRVLLNDPVISSLK 128 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 KQ + + + + Q + + Sbjct: 129 NPDGTIDVDRYKQLLAMQGMTPDQYDERVRYSIATQQLPASIQGSAFTSKTLAQHLTELA 188 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++ ++ + F D + Q + + R ++ Sbjct: 189 EQQREVQGIAFHPRDYAAKVQPTDAQLQAYYDAHRNDFATPATATIQY 236 >gi|330689731|pdb|3RGC|A Chain A, The Virulence Factor Peb4 And The Periplasmic Protein Cj1289 Are Two Structurally Related Sura-Like Chaperones In The Human Pathogen Campylobacter Jejuni gi|330689732|pdb|3RGC|B Chain B, The Virulence Factor Peb4 And The Periplasmic Protein Cj1289 Are Two Structurally Related Sura-Like Chaperones In The Human Pathogen Campylobacter Jejuni Length = 252 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 32/279 (11%), Positives = 75/279 (26%), Gaps = 32/279 (11%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 + I ++ E IT DI + + LK+ A+ LI E ++ ++++ GI + Sbjct: 1 NAIAVVVDKEPITTYDIDQTMKALKID------RNKALGVLINEKMEISQMKQLGIVVND 54 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 ++ + + F + L + F+ + + + + Sbjct: 55 LELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRTNFKKDLEKRKLYEKIASMAKTDF 114 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + + Y + +N + + + L Sbjct: 115 SDDGAKKFFEQNKDKFTFYTQINANIYLSNNPQTLENIKNTKKTILKPQNASLN------ 168 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RD 277 + L + + + + G E + K Sbjct: 169 ------------------TSNADPRLLGLLSQIPVGSFSPVLNGKNGYELYEVKSKDGTQ 210 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +K + + + +Y KLRS I Y Sbjct: 211 TPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 249 >gi|289435560|ref|YP_003465432.1| prsA protein, protein export protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171804|emb|CBH28350.1| prsA protein, protein export protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 295 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 89/304 (29%), Gaps = 40/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + ++ + S + S + T G+ +T ++ + + + Sbjct: 1 MKKKMILGLVMLMAMFSLAACGGGSDVVKTDAGD-VTQDELYEAMK--------DKYGNE 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 VQ+L E + + + + DS + D + Sbjct: 52 FVQQLTFEKILGDKYKVTDEQVDSE------------FKKYKSQYGDQFDAVLAQSGLTE 99 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + +V+ + + + + Sbjct: 100 ETFKSQLKYNMLVQKATEANTDTSDKALKEYYKT---------------WQPDITVSHIL 144 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--K 252 + + K+ E+ K + +++++ + GK + P F+ K Sbjct: 145 VADEAKAKEVEQKLKDGEKFADLAKEYSTDTATKDNGGKLAPFGPGKMDPAFEKAAYALK 204 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKKLRSN 311 ++ + ++P TQ G I + + K + ++ + +KK + Sbjct: 205 NKGDISDPVKTQYGYHIIQMDEPATKTTFDKDKKAVKESYLQSQLTTENMQKTLKKEYKD 264 Query: 312 AIIH 315 A + Sbjct: 265 ANVK 268 >gi|91776379|ref|YP_546135.1| hypothetical protein Mfla_2027 [Methylobacillus flagellatus KT] gi|91710366|gb|ABE50294.1| conserved hypothetical protein [Methylobacillus flagellatus KT] Length = 314 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 35/319 (10%), Positives = 90/319 (28%), Gaps = 42/319 (13%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFC--IVPIVSYKSWAMSSRIRTTINGEVITDGDISK 58 M ++ +++ + K+ V ++ + + +S+ +NG+ IT +++ Sbjct: 1 MNTEYGSTIMQWSKMTKGALVALMISIGLSGCGDKSNETKASQSLARVNGKEITVHQLNE 60 Query: 59 RIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 +A +Q K +Q LI L +Q K+ + D N + Sbjct: 61 ELARANVQPAQKEAATKQILQSLIDRQLLEQAALKAKVDRDPNVMQAI------------ 108 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 + Q I +++ + E+ ++ + Sbjct: 109 ------------------ERAKSQMIAQAYLQSRVANIGKPDKTEVENFYKQNPQLFSER 150 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 L+ I + + + + + +K G+ Sbjct: 151 KLVEMEQILIDSRYVND---------EFKSALGSFKTLQEVAAWLDAKGIQYDRGEVARS 201 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + L + + + + + K + K Sbjct: 202 VAELPPQISERLKDARRGQLFVIGMGPRTMLVLMDSVKESPVSLADATPQIEQMLLNKKR 261 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ +K+LR+ A I Y Sbjct: 262 KEAGEAEIKRLRAEAKIEY 280 >gi|326566313|gb|EGE16464.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis 12P80B1] Length = 367 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 20/190 (10%), Positives = 61/190 (32%), Gaps = 8/190 (4%) Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM-KNITVREYLIRTVLFSIPDNK 191 ++ +++ + K + + ++ +R +L + P + Sbjct: 163 ERAWLENEEATIAKLLEQKVIAKSPDKASCQNYYHANQVEFVSTPIMTLRHILLACPPQE 222 Query: 192 LQNQGFVQKRIKDAEESRL----RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + + ++K+ + + R ++++ G+ L + P+F+ Sbjct: 223 GEERIELKKQARQLIDRLNQSHNRDSDFIEFARRYSACPSKDDGGELGVLQKGSTVPEFE 282 Query: 248 NLLKKSQNNTT-NPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + + NP T+ G+ I + K++ + +Y Sbjct: 283 SAVFALPVGISINPIETRYGIHVIEVLQKQEGRQLSFEEAYPIIENHLKQQSFHHSLCDY 342 Query: 305 VKKLRSNAII 314 + +L A I Sbjct: 343 LFELSQKADI 352 >gi|239833408|ref|ZP_04681736.1| Chaperone surA precursor [Ochrobactrum intermedium LMG 3301] gi|239821471|gb|EEQ93040.1| Chaperone surA precursor [Ochrobactrum intermedium LMG 3301] Length = 301 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 32/280 (11%), Positives = 80/280 (28%), Gaps = 40/280 (14%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG I + DI L A + E L ++ E + Sbjct: 41 AVSVNGVAINETDILTEAQNHPSDNPGAALLAAARALAVRELLLQRAREAGIV------- 93 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + D + ++ V++ + + E Sbjct: 94 -----------------------PEREKDAEGRSETDEDALVRMVIEREVEV-PSATREE 129 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220 + ++ ++ I + +Q + R A + + + Sbjct: 130 ALRFYENNRHRFTSAPILEASHILIAADPADSQAREKARATAARLASAVIAEPATFASVA 189 Query: 221 -KFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGVEYIAICDKR- 276 +++S G L P+F+ + + T P ++ G + + D+R Sbjct: 190 HEYSSCPSGAQGGNLGQLTRGSTVPEFERALERMAAGEITANPIESRFGFHIVRL-DRRI 248 Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ + K ++Y+ L ++A I Sbjct: 249 EGEELPFDYVADRIAGWLEASTWSKAVSQYIAILAADAEI 288 >gi|298384794|ref|ZP_06994353.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 1_1_14] gi|298261938|gb|EFI04803.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 1_1_14] Length = 514 Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 27/291 (9%), Positives = 77/291 (26%), Gaps = 37/291 (12%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 ++ + + ++A + ING+ I + + + I+ Sbjct: 6 LLLGWISLFGVLAFAQEDPVVMRINGKEIPRSEFEYSYRRHTDGNGTKLSPREYAELFIL 65 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 LK + +G+ S D I K+ + Sbjct: 66 SKLKVEAARAAGLDTTSAFRKQQQAYRINLLRSYLLDDQEMDGNARILYQKMKENVRGGQ 125 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + ++ + Y + S+ +L ++ KR Sbjct: 126 VQIRQIYKYLPQTITSRHLQEEQARMDS------IYQVIQNQPSVDFARLVDRFSDDKRC 179 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 + E + + ++ + P+ Sbjct: 180 RWIESLQTTSEFEEAAFS-------------------------------LAKGEISKPFF 208 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 T +G+ + + D++++ + L + ++K V++L+ Sbjct: 209 TPEGIHILKVIDRKEVPAYEVVSDSLLNRLRRQPLDKGTEAIVEQLKKEYQ 259 >gi|157827644|ref|YP_001496708.1| hypothetical protein A1I_06775 [Rickettsia bellii OSU 85-389] gi|157802948|gb|ABV79671.1| hypothetical protein A1I_06775 [Rickettsia bellii OSU 85-389] Length = 294 Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 92/302 (30%), Gaps = 23/302 (7%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEK 74 ++ I + + A +S I +N E IT + R ++ N +L Sbjct: 4 LLLIITVFFTCSAVAETSNIVALVNNEPITLNEFRARKKMIMALNNVEEVTPAQNKQLSD 63 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 IA++ LI E+L Q ++ + +L + + F Sbjct: 64 IAIKSLIDESLLFQYYGDKE--ISQEEIDNAIKSIEDRNKMPHGSLLQYLKSISVNPDSF 121 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + + I +V+ EI V + D Sbjct: 122 ISQIKSELIKMNVLSG-LSRSVQVSNKEIDVAILSSDQKEVEVSMQIFTSKDKSDKTFAQ 180 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 ++ ++K+ + + L ++ + K+ + + + + Sbjct: 181 MNNLKSKLKNCSDVKKSLYENFATMTVITDKLSKIE------------EAKQTIVKDLNP 228 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 N T+N + E + +C K+ L Y+ T KI + ++ + + A I Sbjct: 229 NQTSNVFEKYNEFEIVQVCTKKILNISEEENNYVVNFLTNKKISQKAQKFFEDMHKKAYI 288 Query: 315 HY 316 Sbjct: 289 KI 290 >gi|289548355|ref|YP_003473343.1| hypothetical protein Thal_0582 [Thermocrinis albus DSM 14484] gi|289181972|gb|ADC89216.1| hypothetical protein Thal_0582 [Thermocrinis albus DSM 14484] Length = 275 Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 99/307 (32%), Gaps = 48/307 (15%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-------RIALLKLQKINGELE 73 +L F + +++ INGE I D + I L + + + + Sbjct: 3 ILYFFLVFILLAQAQP------VARINGEPIQREDFLRAFNAYWREIIHLPIAQASRKDM 56 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + + EL+ + ++E +K G++ S ++ + ++ + LS Sbjct: 57 EEFLIELVRGKIVEREAKKMGLSVTSKELDEYIEKNVGSKNLSPVVIELL---------- 106 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 ++ + + + + +I A L Sbjct: 107 -----KVEVLTQK-ITDRIARHIRITDDQITAYYYLNLRDFK----------------LP 144 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKK 252 Q + + + + ++ L +K S + V +G + L ++ Sbjct: 145 AQVLLSRYVAEDLDTANELYYRLSKGYLSVSDLRGVKVGPPMWYSIQTLPEIVKSQLYPY 204 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + T P T+ G + + +R G K + + + ++ ++++++ Sbjct: 205 EEGKVTKPIQTEAGYLILRVVRRRGGGILPLEEAKPLVREKLLKERRQEVFRKWLEEVLQ 264 Query: 311 NAIIHYY 317 + + ++ Sbjct: 265 SYRVEFF 271 >gi|88810611|ref|ZP_01125868.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrococcus mobilis Nb-231] gi|88792241|gb|EAR23351.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrococcus mobilis Nb-231] Length = 645 Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 22/269 (8%), Positives = 70/269 (26%), Gaps = 16/269 (5%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + ++I F + +Y S+ T+NG IT ++ + Sbjct: 1 MLQTIRDRAQGIVAYIIVGLLIIPFAFFGVYNYF-TGDSNPTVATVNGIDITRAELDAAV 59 Query: 61 ALLKLQKI-------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + Q L + L+ + + I G ++ F Sbjct: 60 QRQQSQLRELLGDQYNPALFDESHLRPQVLDRLVDQAVLLYFIRSQGFRVTDESLRSFIR 119 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + QY A + + + + + + + Sbjct: 120 SQPYFLADGQFSKERYRAVLRQSGYSTDQYEAQLRQQQLLRQLELGIVGTAVATKHEMAR 179 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK-DAEESRLRLPKDCNKLEKFASKI 226 R+ + + ++ Q ++ +++ + + + + Sbjct: 180 FVALERQSRDLAWLKIDSANFRDQTQVDAKAIQQYYATHKQAFEQPAQVKVSYIELSENA 239 Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 + + + +F++ + Sbjct: 240 LADQL-ELDDKAVQRFYEEFKDSRFTVPD 267 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 21/231 (9%), Positives = 57/231 (24%), Gaps = 3/231 (1%) Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E + +E+ ++ + A KQ + I+ Sbjct: 176 EMARFVALERQSRDLAWLKIDSANFRDQTQVDAKAIQQYYATHKQAFEQPAQVKVSYIEL 235 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + R + ++ Q + + Sbjct: 236 SENALADQLELDDKAVQRFYEEFKDSRFTVPDARRVRHILIKLPKDASQHQIEVARGQIE 295 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPY 261 E + G ++ + ++ + K T+ P Sbjct: 296 ALRERIVQGASFAELAQRQSQDVGSARQSGDLGFVRQGEMAKAIDEAAFKLPIGETSEPI 355 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 ++ G I + R G + + + +Q +++ + KL + A Sbjct: 356 RSRFGWHLIEVTASRAGGVK--PFSEVESQIRQELLKQQSGKRFYKLSNQA 404 Score = 37.3 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 22/264 (8%), Positives = 72/264 (27%), Gaps = 16/264 (6%) Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 ++ ++ + +++ ++ K+ + + A GL + F Sbjct: 376 PFSEVESQIRQELLKQ---QSGKRFYKLSNQAANYAYEHPDSLEPLAAKFGLKIRQSNWF 432 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + + +V+K + +L E + ++ + V Sbjct: 433 SQAGAKEGIASHPKVVKAAFSDEVLKQGLNSQSIDLGDEHQVILRVDQHKPAAVRPLAEV 492 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-- 241 + ++ + Q + A+ + A++ S ++ Sbjct: 493 RDRVREHLVTVGASEQAQKLGAQLLEKAKSGQSLEALAEANQHARYS--AVGWVRRGSNK 550 Query: 242 LHPQFQNLLKKSQNNTTNPYV------TQKGVEYIAICDKRDL---GGEIALKAYLSAQN 292 + + + +++ + G + + RD + A + + Sbjct: 551 VPAAIVERGFRLPHPSSDALALAGIELSDGGYGVVEVRGVRDGALDKLDAAERTQVRQGL 610 Query: 293 TPTKIEKHEAEYVKKLRSNAIIHY 316 E + LR A + + Sbjct: 611 QRLNAESTLQAMIHVLRQQADVEF 634 >gi|194014491|ref|ZP_03053108.1| foldase protein PrsA [Bacillus pumilus ATCC 7061] gi|194013517|gb|EDW23082.1| foldase protein PrsA [Bacillus pumilus ATCC 7061] Length = 294 Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 88/301 (29%), Gaps = 44/301 (14%) Query: 21 VLIIFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79 L V +++ + + + + T +T ++ + + A+ Sbjct: 5 ALAAVTAVSVLTLGACSSGDKDVIATTKSGDVTKEELYTTLK--------KQAGGDALNL 56 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 L+ + + + + S D Y ++F K Y+ Sbjct: 57 LVQQKVLADKYKVSDKEIDKKMEEYKKTLGEDRLKQLQDEF-------------GKDYIK 103 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 Q + + + + E+ A +K +++ + Sbjct: 104 DQVKYELLTQKAAKANIKITDKEVKAYYDDLKGKIRASHIL---------------VADK 148 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYL-LESDLHPQF-QNLLKKSQNN 256 K + E+ + K + ++++ G + E + F + K N Sbjct: 149 KTADEVEKKLDKGEKWDAVVSEYSTDTASAAQGGDVGWFAKEGQMDENFSKAAFKLKVNE 208 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314 + P +Q G I ++R G +KA L + K + KL +A + Sbjct: 209 ISKPVKSQFGYHIIKKTEER--GKYDDMKADLKKELLNQKQADTNEIQTILNKLVKDADV 266 Query: 315 H 315 Sbjct: 267 K 267 >gi|282856786|ref|ZP_06266047.1| hypothetical protein HMPREF7215_0584 [Pyramidobacter piscolens W5455] gi|282585409|gb|EFB90716.1| hypothetical protein HMPREF7215_0584 [Pyramidobacter piscolens W5455] Length = 368 Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 39/332 (11%), Positives = 101/332 (30%), Gaps = 30/332 (9%) Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAM-------SSRIRTTINGEVITDGDI 56 ++ T+L IK + F++I V + + + +NGE + + Sbjct: 2 QILTALRTQIKWILALFIVIFTASVGFMYGTGGSSDSDNQRTGDFVVAKVNGEELRISQL 61 Query: 57 SKRIALLKLQKINGEL--------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + + + +L K E++ E+ + I+ ++ V+ + Sbjct: 62 QEHLRSFVERNGIRDLSDKQMPLIYKAVFDEMVSNRAVIDEVARLKISAPADDVDRQLKE 121 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 ++ E F L QG K +A Q ++++ + + Sbjct: 122 VENQY-VTKEAFMQTLKNQGSSLEQVKAEIARQLAINKMLEDVSGGVVVSDDEIKTLYDA 180 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 N T+ + + K KD +++ + D + ++ +H+ Sbjct: 181 LRGNFTLPAGIEADFVQLKSKEAADKFAEEVKADKDWDKALTIVSADVVQAT--SNDVHE 238 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQ----KGVEYIAICDKRDLGGEIAL 284 + ++ + + + + + P V I D+ + Sbjct: 239 R-------IAAMEMVGKLEPISALNDGEISAPIEITSQDYFVVHRIKAVS-EDVRPLSEV 290 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +K + + Y+K L + Sbjct: 291 SDGIKTMLLQSKKVEAQRNYIKGLTDKMNVEI 322 >gi|295676521|ref|YP_003605045.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1002] gi|295436364|gb|ADG15534.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1002] Length = 644 Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 26/263 (9%), Positives = 67/263 (25%), Gaps = 17/263 (6%) Query: 52 TDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 T +R+ L +Q++ + A +TL + E + + + + + Sbjct: 149 TPDQYDERMRYNLAMQQLPASIAASAFTS---KTLAQHLSELAQQQREVQGIAFHPHDYE 205 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + ++ D + + ++ Sbjct: 206 AKIQPTDAQLQAYYDAHRNDFATPATAAIQYVVMSP---ATLGASVQPSDADLKKYYDDN 262 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH--- 227 E +R I K + K + AEE +L ++ + A + Sbjct: 263 IAHFRTEGEVRASHILIAAPKDASTADKAKAKQKAEELLAQLKAHPDQFAQIAQQNSQDP 322 Query: 228 --DVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GG 280 G Y + + ++ + T G I + + + Sbjct: 323 GSASKGGDLGYFGRGMIAGGQAFDDAVFALKKDEISGIVQTDFGFHIIKVTEVKPAVTKS 382 Query: 281 EIALKAYLSAQNTPTKIEKHEAE 303 +K ++ + K + Sbjct: 383 FDEVKDQIAKEVKTQLASKAFTD 405 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 20/237 (8%), Positives = 59/237 (24%), Gaps = 15/237 (6%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 + + +L V I ++ + S ++NG IT + + + Sbjct: 9 QRLMMFMLILVILPGLGFVGIQGFRGFFDESANVASVNGHKITRVEYDDAMRQQIDRGRQ 68 Query: 70 -------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQHARNTG 114 E + + +I + + E ++ +T + V + Sbjct: 69 MLGAQFDMKAFDTPERRREMLDGMIEQRVLADETQRLHLTASDDAVRRALLSDPVISSLK 128 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 KQ + + + ++ Q + + Sbjct: 129 NPDGSIDLERYKQLLAMQGMTPDQYDERMRYNLAMQQLPASIAASAFTSKTLAQHLSELA 188 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 ++ ++ + F D + + Q + + R ++ Sbjct: 189 QQQREVQGIAFHPHDYEAKIQPTDAQLQAYYDAHRNDFATPATAAIQYVVMSPATLG 245 Score = 38.9 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 8/55 (14%), Positives = 15/55 (27%), Gaps = 1/55 (1%) Query: 264 QKGVEYIAICDK-RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G + + A Q + Y+K LR + + +Y Sbjct: 578 DDGYAIYRVNRIVPPAATDAQHLAVAQQQIAQVDAQSQAEAYLKALRERSKVQFY 632 >gi|94985701|ref|YP_605065.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus geothermalis DSM 11300] gi|94555982|gb|ABF45896.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus geothermalis DSM 11300] Length = 635 Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 29/302 (9%), Positives = 73/302 (24%), Gaps = 26/302 (8%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--INGELEKIAVQELIVETLKK 87 + + + +NG+ +T ++ +G L ++ + ++ Sbjct: 25 VGALFGRRQAGTPALKVNGQTVTAEELEAIRRSFPALAGFESGPLADDLKTYVVAQKARQ 84 Query: 88 QEIEKSGITFDS---NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 + ++ + N + ++ L G+ D F+Q + Q Sbjct: 85 VLLIQAAKDIKVSRADVNAEVQKVRQANNLTDNKAWTDALQSAGLTDATFRQQVRDQLAV 144 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 + + E + S + K + Sbjct: 145 QRKSEEIQQAAPPATDAEARLYYELHPESFQ----------SDARIVGREIVVNDKAKAE 194 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD--------LHPQFQNLLKK-SQN 255 A ++R D +L + S G L L + + Sbjct: 195 ALLKQVRGGADFAQLARQNSSEFAERGGALGPLENGRPRPVARVALPDEVAAAAFALTGG 254 Query: 256 NTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 T+ + + + KA K + +++ L + Sbjct: 255 GVTDVIASGGKFYIVKVEQYLPPQTKPFADAKADAVTAVNRQKKDAAVEQWLTNLERDVK 314 Query: 314 IH 315 I Sbjct: 315 IE 316 Score = 43.9 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 24/289 (8%), Positives = 62/289 (21%), Gaps = 56/289 (19%) Query: 34 KSWAMSSRIRTTINGEVITDGD-------------ISKRIALLKLQKINGELEKIAVQEL 80 +W + ++ G+ I D + ++ Q IN L+ VQ+L Sbjct: 320 PAWKTENPTVASVAGQNIPYSDVVAQVVQNQQVTNLVSQMGDQAAQLINSILKPQIVQQL 379 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I + +++ + A + Sbjct: 380 IQSYAAPKIVQQKNLALTGTRQELAAGLVAYGARNVQVTDADIQKFYLQNP--------- 430 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 F E + + + + + + Sbjct: 431 ---------QQFETPASATVSEASFADRDKALAFRQSWNGQGDFTAAATKAGATVSERGE 481 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260 E+ L + A + + + ++ Sbjct: 482 VRPSTPETPGTLAQPVEAAVFTAKTL-----------------------RPAGEGSLSDV 518 Query: 261 YVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + D + + A++ + Q K E+ Y+ + Sbjct: 519 VKVGNRYVVAYVTDLQRASVQPLAAVRDQIRQQLLTQKREEAGQAYLAQ 567 >gi|56477779|ref|YP_159368.1| putative peptidyl-prolyl cis-trans isomerase [Aromatoleum aromaticum EbN1] gi|56313822|emb|CAI08467.1| putative peptidyl-prolyl cis-trans isomerase [Aromatoleum aromaticum EbN1] Length = 236 Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 20/179 (11%), Positives = 47/179 (26%), Gaps = 4/179 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 ++ +++ + L+ E + + ++ Q Sbjct: 38 EEAAVEKLLEREVKLEPVADEEIRRYFDANRQRFRSGALFEVRHILFDTTRDGSDRATAQ 97 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNT 257 K + R + + G + E + P+F + Sbjct: 98 KAERALFHLRNNPEAFERVAAEESCCTSAKIGGALGQISEGAVVPEFWVALVNFGKAGLL 157 Query: 258 TNPYVTQKGVEYIAI--CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T+ G + I + A++A + T + +YV +L A I Sbjct: 158 PQLVETRFGHHIVMIDHLALGEALPFEAVQARIRDYLTGRLEQLTYQQYVAQLIGQAHI 216 >gi|254252159|ref|ZP_04945477.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia dolosa AUO158] gi|124894768|gb|EAY68648.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia dolosa AUO158] Length = 645 Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 25/273 (9%), Positives = 59/273 (21%), Gaps = 22/273 (8%) Query: 53 DGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 D+ + LL Q + ++ L ++ + I + R Sbjct: 133 SIDVERYAQLLSFQGMTPEQYQERVRYSLALQQIPASIISSAFTPKSLAQRLSELAAQQR 192 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ---------SIWPDVVKN--DFMLKYGNLE 160 S + K D Y + +V + + Sbjct: 193 EVQSLVLKTSDYAAKVQPTDAQLAAYYDAHKQSFATPATATIQYLVYSPAAAAASAQPTD 252 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +I E +R I + AE+ + ++ Sbjct: 253 ADIKKFYDDNPTHFRTEAQVRVSHIFIAAASSASAADKAAAKAKAEQLLAEVKAHPDQFA 312 Query: 221 KFA-----SKIHDVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 + A G ++ Q + + G + Sbjct: 313 QIAEKNSQDAPSAAKGGDLGFITRGSTAGGKAFDDAAFALKQGEVSGVVESDLGFHILKA 372 Query: 273 CDKRDL--GGEIALKAYLSAQNTPTKIEKHEAE 303 + + +K ++A K ++ Sbjct: 373 TEVKPAVLKPFAEVKDQIAADLKQQYAAKAFSD 405 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 20/211 (9%), Positives = 55/211 (26%), Gaps = 15/211 (7%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------GELE 73 V I ++ + S +NG IT + Q E Sbjct: 26 FVGIQGFRGFFDDSANVAAVNGHKITRVEFDAAFRQQIDQARQALGGQFDIKMFDTPEHR 85 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--QHARNTGLSAEDFSSFLDKQGIGD 131 K + LI + + E ++ +T N V + + Q + Sbjct: 86 KQVLDGLIQQRVLADETQRLHLTASDNAVREALMSDPMIASLKKPDGSIDVERYAQLLSF 145 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + + + Q++ + ++ +++++ D Sbjct: 146 QGMTPEQYQERVRYSLALQQIPASIISSAFTPKSLAQRLSELAAQQREVQSLVLKTSDYA 205 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q + + + ++ Sbjct: 206 AKVQPTDAQLAAYYDAHKQSFATPATATIQY 236 >gi|261868689|ref|YP_003256611.1| peptidyl-prolyl cis-trans isomerase D [Aggregatibacter actinomycetemcomitans D11S-1] gi|261414021|gb|ACX83392.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D) [Aggregatibacter actinomycetemcomitans D11S-1] Length = 615 Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 38/392 (9%), Positives = 105/392 (26%), Gaps = 81/392 (20%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR-- 59 K+ + +++ F+ + F I + Y + S +NGE I+ + Sbjct: 3 MEKLHGASNNWASKFLFGFITVTFVISSMAGYLYSRIDSS-AAKVNGEEISQQAFQNQYN 61 Query: 60 ----------------IALLKLQKINGELEKIAVQELI--------VETLKKQEIEKSGI 95 +A LK Q ++ +++ +++ + E +K++ + Sbjct: 62 IASQNLSPQEADSPTVVANLKRQVLSSLIDQELLRQYVKDLKLGVSDERIKQEIVTTPSF 121 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLD-------------------KQGIGDNHFKQ 136 + N + Q ++ G+SAE ++ ++ Sbjct: 122 QNNGKFDNVLYQQLLQSNGISAETYAGYVREALHLEQLQSGLGITAFTVPVQQEALTKLF 181 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + D + K EI A K ++ + ++ Sbjct: 182 FQRRDVRLATLSLADEIAKQTVSAEEIQAYYDAHKADFTLPESVKVQYLDLSGANMEKNI 241 Query: 197 FV-------------------------------QKRIKDAEESRLRLPKDCNKLEKFASK 225 + +++ +D + + + Sbjct: 242 NISNVEIAQYYQDNKSQFMTQGQQRLAHIEVKTEQQAQDLYQQLQNGADFATLAKNHSID 301 Query: 226 I-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GE 281 G ++ + F++ + P I + +++D Sbjct: 302 PISAEKGGDLSWVSAGEFPKVFEDAANALDVGKFSQPVKLDNSYHIILVEERKDSAVLPL 361 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++ + AQ + K++ A Sbjct: 362 ERVRPQIVAQIRQNLVNNQFFSVEKRVAEKAF 393 >gi|148828172|ref|YP_001292925.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae PittGG] gi|148719414|gb|ABR00542.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae PittGG] Length = 622 Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 47/395 (11%), Positives = 110/395 (27%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + I + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLTNSKISKFILGLIAVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 AL---LKLQKINGE-------------LEKIAVQELIV-----------------ETLKK 87 ++ Q+ L + V +I E +K+ Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 VK D M K + EI + + V+ ++ Sbjct: 181 VKNSAEIFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 185 ------------------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + Q ++ K A E + + + Sbjct: 241 ADNISRNLQVTDVEIAQYYQDNKAQFMTQHLAHIQFANEQDAKVAYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ E++L F++ + P + + +++ Sbjct: 301 AKSLDKISGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA ++ + +E K+ A Sbjct: 360 QSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394 >gi|225848231|ref|YP_002728394.1| SurA N- domain family [Sulfurihydrogenibium azorense Az-Fu1] gi|225644703|gb|ACN99753.1| SurA N- domain family [Sulfurihydrogenibium azorense Az-Fu1] Length = 285 Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 100/303 (33%), Gaps = 25/303 (8%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 FVL + V + + + + +I +NGE + D+ K++ K Sbjct: 6 FIFIFVLTVLGFVKAENLEGYQLFDKIVLVVNGEPVLKSDVEFAKEWYKIKDD-----KQ 60 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-NTGLSAEDFSSFLDKQGIGDNHF 134 A +++I L Q+ K GI+ V+ + A+ N E F L+K GI Sbjct: 61 AQEKIIDSILLSQQARKLGISVSPKEVDNALLSIAKANNIQDLETFKKELEKNGISYTKL 120 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 K+++ + + +E ++ + + Sbjct: 121 KEFITRDLVSNKFLHFYLRDYITKGIVE------------GSVEDVKKIRMIYISKDRPD 168 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 V K +E + + K + G + + DL + + + Sbjct: 169 YESVVKL---LKEKLNKNNFSEYAAKYSDDKFTAENAGLLGEVKKGDLAEELDKEVFSRK 225 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T++G +I I ++ I + K+++ Y+KKLR A+I Sbjct: 226 EGDIFQVDTKEGTYFIYIE--KEEKKLIPKENLTEKDM--EKLKREYDMYLKKLREKAVI 281 Query: 315 HYY 317 + Sbjct: 282 QRF 284 >gi|6006449|emb|CAB56780.1| p13 protein [Dictyostelium discoideum] Length = 91 Score = 71.6 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 4/93 (4%) Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEI 282 G + ++ F + K + P TQ G I + D R + E Sbjct: 1 GDPRQRGGDLGWAPATNYVQPFAEAVTKLKKGQLVDKPVQTQFGWHVIQVDDTRPV--EF 58 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + Q ++ A Y K+LR A I Sbjct: 59 PAMDQVRPQLEEMLRQQTLANYQKQLREQAKIQ 91 >gi|328957038|ref|YP_004374424.1| foldase protein PrsA [Carnobacterium sp. 17-4] gi|328673362|gb|AEB29408.1| foldase protein PrsA [Carnobacterium sp. 17-4] Length = 333 Score = 71.6 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 29/297 (9%), Positives = 74/297 (24%), Gaps = 35/297 (11%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 L++ + S + IT+ + + + + +Q+LI Sbjct: 4 LLLATATILAGLTIAGCSDSTVASSTAGKITEDEFYEAMK--------ETVGTSMLQQLI 55 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 +E + + + + + + + + Sbjct: 56 IEDVLTDLYGDKVTDEVVDKQYATEEETY--------GGAEAFEYIMLQQGYTAENYKDT 107 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 +++ K E EI A + V +L ++ Sbjct: 108 IRLNLLIEEAVKDKTEFTEEEIQA----AYDAYVPPVTAAHIL-----------VEDEET 152 Query: 202 IKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT-N 259 KD + + + G+ + + + + T Sbjct: 153 AKDLITQINDGADFAELATENSVDTATAPNGGEITFSSGEMVPEFEEAAYALEEGEMTTE 212 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI--EKHEAEYVKKLRSNAII 314 P ++ G I + +K + G + Q K+ E + + +A I Sbjct: 213 PVASEYGFHVIKMIEKPEKGTLEEETDTIKDQLLTAKLADSAAIQEVISGIMQDANI 269 >gi|167849967|ref|ZP_02475475.1| putative rotamase [Burkholderia pseudomallei B7210] Length = 156 Score = 71.6 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 3/104 (2%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN-NTTNPYVTQK 265 ++ +F++ S G ++ + L +N + + P Sbjct: 48 NQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGSN 107 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 G + + DKRD+ + Q ++ +LR Sbjct: 108 GYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 149 >gi|217958629|ref|YP_002337177.1| peptidylprolyl isomerase [Bacillus cereus AH187] gi|229137839|ref|ZP_04266438.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST26] gi|217067290|gb|ACJ81540.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus AH187] gi|228645496|gb|EEL01729.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST26] Length = 287 Score = 71.6 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 87/305 (28%), Gaps = 46/305 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + +++ + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYEQMKT--------QAGKQ 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QGI + K Sbjct: 52 VLNNMVMEKVLIKNYKVEDKEVDKKFD--------EMKKQYGDQFDTLLKQQGIKEETLK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q ++ K + + Sbjct: 104 TGVRAQLAQEKAIEKTITDKELKDNYKPEIKASHILVKD--------------------- 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G + + +F+ K Sbjct: 143 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEEAAYKLK 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRS 310 ++ + P +Q G I + D ++ KA + + K + + + K Sbjct: 200 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKAQDGAFMNDLMMKEIK 259 Query: 311 NAIIH 315 A + Sbjct: 260 KADVK 264 >gi|56416400|ref|YP_153474.1| hypothetical protein AM041 [Anaplasma marginale str. St. Maries] gi|254994626|ref|ZP_05276816.1| hypothetical protein AmarM_00174 [Anaplasma marginale str. Mississippi] gi|56387632|gb|AAV86219.1| hypothetical protein AM041 [Anaplasma marginale str. St. Maries] Length = 401 Score = 71.6 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 94/280 (33%), Gaps = 14/280 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA---LLKLQKINGEL 72 + Y + V + S+ +A S RI+ ++G+ IT D+S+R G Sbjct: 1 MLRYLLCCCALCVILASHHCYASSVRIKAVVDGKAITSLDVSRRTKANAFFYKTAHAGSD 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFLDKQGIGD 131 + +Q L+ E++ + E ++ GI+ + + G+ + + G+ Sbjct: 61 QGEVLQSLVDESVLELEAKELGISVGKRELEAEASKMFSVLGVCDGLSVGECVAQNGLDY 120 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + +L + IW ++ + ++ + K+ + L +F Sbjct: 121 KSVEDHLRSRVIWSKILATRVAPFLAVSDSDVENYVDEAKSAGLETVLDLEQVFVPFKAG 180 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + + K + ++ + +A + + L +L+K Sbjct: 181 NVLDSVLSELNKGV--ALDKIASRYREHAVYADRA-------VGVTASAFLPDVKISLVK 231 Query: 252 KSQNNTTNPYVTQKGVEYIAICDK-RDLGGEIALKAYLSA 290 P +G + + +K + G + A + Sbjct: 232 AKVGQVIGPIRIDRGYLVLKLLNKVKVSKGFLNSSASIKR 271 >gi|86130561|ref|ZP_01049161.1| peptidylprolyl isomerase [Dokdonia donghaensis MED134] gi|85819236|gb|EAQ40395.1| peptidylprolyl isomerase [Dokdonia donghaensis MED134] Length = 643 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 32/302 (10%), Positives = 79/302 (26%), Gaps = 53/302 (17%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKING 70 ++ L + F + + +N + +T D + L + Sbjct: 1 MRYLFIVCFFMPFVSLG---------QQEVLLKVNNDEVTTADFVRVYEKNLALINDTEE 51 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + + I LK QE + G+ ++ + D Sbjct: 52 NSPEQYLDLFIDYKLKVQEAYRKGLHNKASYKKEIASYRTQLGKDYLNDVQ--------- 102 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + +V+ + L ++ PD Sbjct: 103 ------------VTDKLVEEAYNRTKNELRA------------------RHILVRVRPDA 132 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQNL 249 ++ ++ +A + + K++ + G + + F+N Sbjct: 133 LPKDTLAAFNKLLEARKRIVAGEDFAFIASKYSEDPSAKQNGGDLGWFKAFKMVYPFENA 192 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 N + P+ T G + R G + + A++ E +K++ Sbjct: 193 AYTTKVNEVSQPFRTSFGYHIVQPTASRIAQGSVQV-AHIMIALKQKDSSIIAEEKIKEV 251 Query: 309 RS 310 R+ Sbjct: 252 RA 253 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 16/139 (11%), Positives = 41/139 (29%), Gaps = 5/139 (3%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLE 239 + I + + +++IK+ + ++ G + Sbjct: 227 QVAHIMIALKQKDSSIIAEEKIKEVRALLAKGAAFETLALNYSDDKNSAKKGGVLSAFEK 286 Query: 240 SDLHP---QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPT 295 L + K + + P+ T+ G + + K + +K L+ + + Sbjct: 287 GQLSSSKFENTAFDLKKVGDISEPFKTKFGWHILKLIKKNPVLSFEKMKPSLTKRVTKDS 346 Query: 296 KIEKHEAEYVKKLRSNAII 314 + E +LR I Sbjct: 347 RARVLSQELNTRLREQYKI 365 >gi|187929591|ref|YP_001900078.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii 12J] gi|309781629|ref|ZP_07676363.1| peptidyl-prolyl cis-trans isomerase [Ralstonia sp. 5_7_47FAA] gi|187726481|gb|ACD27646.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii 12J] gi|308919604|gb|EFP65267.1| peptidyl-prolyl cis-trans isomerase [Ralstonia sp. 5_7_47FAA] Length = 261 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 50/173 (28%), Gaps = 4/173 (2%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 +++ + + + + + + + ++ +QK + + Sbjct: 76 LLERELAVPEPTRADCERYYQNHPARFRRNDIVYASHILFAVTDRAPVALLLQKAQQTLQ 135 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN--LLKKSQNNTTNPYVTQ 264 + + ++ G LL D P+F+ T+ Sbjct: 136 QVLEAPETFEAVAREVSNCPSAGVGGSLGQLLRGDSVPEFERVLFDSTETGVLPRIVKTR 195 Query: 265 KGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 G + I + D A++A ++ K +YV L S A + Sbjct: 196 FGFHVVRIEHRVAGDTVPFDAVEAEIAQYLEARVRHKATQQYVSILASQAQVE 248 >gi|154148381|ref|YP_001406634.1| foldase protein PrsA [Campylobacter hominis ATCC BAA-381] gi|153804390|gb|ABS51397.1| foldase protein PrsA [Campylobacter hominis ATCC BAA-381] Length = 275 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 43/298 (14%), Positives = 89/298 (29%), Gaps = 39/298 (13%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--KRIALLKLQKINGELEKIAVQELIV 82 F I + + ++++ + T ITD DI+ + IN E +K ++ LI Sbjct: 4 FLISTLSLVAAISLNADVLATAGDIKITDEDITPFLEQNHMNGIDINDEQKKALLENLIK 63 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 L +E + SG+ + +A Sbjct: 64 YKLLVKEAKNSGVENELEYKKRL-------------------------------DIAADG 92 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 I + +++ K + E ++ V I + + K + Sbjct: 93 IAFGLWQDNEFKKVNVSDDEAKKFYEENNASFVIPEQISASHILVKEEKEAKNIISKLSK 152 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-P 260 E+ K ++ K + G + + + F+ + + T P Sbjct: 153 LKGEKLSKEFAKIASE--KSIDNGTKQNGGALGFFQKGQMVEPFEKAVFGLKKGELTKQP 210 Query: 261 YVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 TQ G I D++ ++K + K +K E + L A + + Sbjct: 211 VKTQFGYHIILKTDEKKASTLPFESVKNAIINNIKGQKFQKQIDEKAEALYKAANVQF 268 >gi|57239486|ref|YP_180622.1| hypothetical protein Erum7600 [Ehrlichia ruminantium str. Welgevonden] gi|58579465|ref|YP_197677.1| hypothetical protein ERWE_CDS_08010 [Ehrlichia ruminantium str. Welgevonden] gi|57161565|emb|CAH58493.1| putative membrane protein [Ehrlichia ruminantium str. Welgevonden] gi|58418091|emb|CAI27295.1| Hypothetical protein ERWE_CDS_08010 [Ehrlichia ruminantium str. Welgevonden] Length = 425 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 110/306 (35%), Gaps = 22/306 (7%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--INGELEKIAVQE 79 + +F ++ + + ++ +NGE+I+ D+ + IA+ K + + I + Sbjct: 31 IGLFLLIFAFYCSNAFANVKMVAMVNGELISSLDLERYIAISKFFYHVDSDVAKDIELDS 90 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-----LSAEDFSSFLDKQGIGDNHF 134 LI E + KQE EK + + Q G DF S+ ++QG+ + Sbjct: 91 LIDEYIWKQEAEKLKVVVSEQEILDAVNQLFVMKGSNHKENHNNDFKSYTEQQGLDYDML 150 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDNKL 192 Q++ + +W ++ + EI + N I+ ++ + + Sbjct: 151 IQHVKSKLLWNKILMLKVVPYISVSNKEILDSQDTMLSPNGLNIFVHIQEIVLPVGLSDN 210 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 ++ ++ + E+ + +++ +L + L L Sbjct: 211 NVTDVIRSLHDGISIDNIKKRVEGLLFEETS-----INLKDVDIVLANQL-------LNA 258 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKKLRSN 311 N+ P T+ G I + ++ ++ E A + L + K + + L++ Sbjct: 259 KVNDVIGPIKTEYGNLIIKLLNRFEINREFANSSVNLQQMYLDVQESKKYVDQISLLKTK 318 Query: 312 AIIHYY 317 A + Sbjct: 319 AKCENF 324 >gi|319775064|ref|YP_004137552.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae F3047] gi|317449655|emb|CBY85861.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae F3047] Length = 622 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 47/395 (11%), Positives = 110/395 (27%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + I + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLTNSKISKFILGLITVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 AL---LKLQKINGE-------------LEKIAVQELIV-----------------ETLKK 87 ++ Q+ L + V +I E +K+ Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 VK D M K + EI + + V+ ++ Sbjct: 181 VKNSAEVFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 185 ------------------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + Q ++ K A E + + + Sbjct: 241 ADNISRNLQVTDVEIAQYYQDNKAQFMTQHLAHIQFANEQDAKVAYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ E++L F++ + P + + +++ Sbjct: 301 AKSLDKISGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA ++ + +E K+ A Sbjct: 360 QSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394 >gi|145638176|ref|ZP_01793786.1| lipoprotein signal peptidase [Haemophilus influenzae PittII] gi|145272505|gb|EDK12412.1| lipoprotein signal peptidase [Haemophilus influenzae PittII] gi|309751332|gb|ADO81316.1| Putative peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae R2866] Length = 622 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 46/395 (11%), Positives = 111/395 (28%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + I + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLTNSKISKFILGLIAVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 AL---LKLQKINGE-------------LEKIAVQELIVETLKKQEIE------------- 91 ++ Q+ L + V +I + L +Q ++ Sbjct: 61 NQEFEIRAQREGEAFMGQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 92 ----KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNSVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 VK D M K + EI + + V+ ++ + Sbjct: 181 VKNSAEIFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 189 DNKLQNQGFV----------------------------QKRIKDAEESRLRLPKDCNKLE 220 + + V ++ K A E + + + Sbjct: 241 ADNISKNLQVTDIEIAQYYQDNKAQFMTQRLAHIQFANEQDAKMAYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ ++L F++ + P + + +++ Sbjct: 301 TKSLDKISGENGGDLGWVNANELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA ++ + +E K+ A Sbjct: 360 QSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394 >gi|115351959|ref|YP_773798.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria AMMD] gi|115281947|gb|ABI87464.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria AMMD] Length = 644 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 23/273 (8%), Positives = 60/273 (21%), Gaps = 22/273 (8%) Query: 53 DGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 D+ + LL Q + ++ L ++ + + + R Sbjct: 133 SIDVERYAQLLSFQGMTPEQYQERVRYSLALQQIPASIVASAFTPKGPAQRLSELAAQQR 192 Query: 112 NTGLSAEDFSSFLDKQGIGDNH---FKQYLAIQSIWPDVVKNDF--------MLKYGNLE 160 + S + K D + P+ + + Sbjct: 193 EVQALVQKTSDYAAKVQPTDAQLTAYYDAHKQSFATPETATIQYLVYSPAAAAASAQPND 252 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +I E +R I + AE+ + ++ Sbjct: 253 ADIKKFYDDNPTHFRSEAQVRVSHIFIAAASDASAADKAAAKAKAEQLLADVKAHPDQFA 312 Query: 221 KFA-----SKIHDVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 + A G ++ Q + + + G + Sbjct: 313 QIAQKNSQDAPSAAKGGDLGFITRGSTAGGKAFDDAAFALKQGDVSGVVQSDLGFHILKA 372 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAE 303 + + + +K ++ Q K + Sbjct: 373 TEVKPSVVKPFADVKDQIAVQLKQQYAAKAFTD 405 Score = 44.3 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 21/211 (9%), Positives = 52/211 (24%), Gaps = 15/211 (7%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------GELE 73 V I ++ + S ING IT + Q E Sbjct: 26 FVGIQGFRGFFDDSANVAAINGHKITRVEFDGAFRQQIDQARQALGGQFDIKAFDTPEHR 85 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--QHARNTGLSAEDFSSFLDKQGIGD 131 K + LI + + E ++ +T N V + + Q + Sbjct: 86 KQVLDGLIQQRVLADETQRLHLTASDNAVRDALMSDPMIASLKKPDGSIDVERYAQLLSF 145 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + Q++ + ++ ++ ++ D Sbjct: 146 QGMTPEQYQERVRYSLALQQIPASIVASAFTPKGPAQRLSELAAQQREVQALVQKTSDYA 205 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q + + + ++ Sbjct: 206 AKVQPTDAQLTAYYDAHKQSFATPETATIQY 236 >gi|330689730|pdb|3RFW|A Chain A, The Virulence Factor Peb4 And The Periplasmic Protein Cj1289 Are Two Structurally-Related Sura-Like Chaperones In The Human Pathogen Campylobacter Jejuni Length = 252 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 34/279 (12%), Positives = 86/279 (30%), Gaps = 35/279 (12%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 T+NG+ I+D ++S+ A + + L + LI + + + I + + Sbjct: 3 VATVNGKSISDTEVSEFFAPMLRGQDFKTLPDNQKKALIQQYIMQDLILQDAKKQNLEKD 62 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + A +I +V + + + Sbjct: 63 P---------------------------LYTKELDRAKDAILVNVYQEKILNTIKIDAAK 95 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + A + K+ V+ ++ + K + + +E + + ++ Sbjct: 96 VKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGLKGKELDAKFSE---LAKEK 152 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICD--KRD 277 + G+ + +S + F + +N TT P T G I + + Sbjct: 153 SIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTNFGYHVILKENSQAKG 212 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +K + + +K + + L ++A + Y Sbjct: 213 QIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEY 251 >gi|153005187|ref|YP_001379512.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. Fw109-5] gi|152028760|gb|ABS26528.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. Fw109-5] Length = 288 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 17/181 (9%), Positives = 54/181 (29%), Gaps = 5/181 (2%) Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + + + + + ++ + + R + V F D + + + Sbjct: 96 RREILAAEYLDREL-AQADREDLLRERYAARKDQLARRRIHVAHVAFLARDGEPRAKAAA 154 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHP-QFQNLLKKSQNN 256 Q + A ++ + G LLE ++ F+ + Sbjct: 155 QSKASRAYARLAGGDAFEAVAKEMSEDPVTGAKGGDLGPLLEGEVDQGFFEAAAALTAGE 214 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + P T G + ++ + + + + + + +++LR + + Sbjct: 215 FSKPIETPYGFHVVKALER--VETVTPSFDDVRSALAAEARRETQVKLLERLREDVSVRV 272 Query: 317 Y 317 Y Sbjct: 273 Y 273 >gi|212696251|ref|ZP_03304379.1| hypothetical protein ANHYDRO_00787 [Anaerococcus hydrogenalis DSM 7454] gi|212676880|gb|EEB36487.1| hypothetical protein ANHYDRO_00787 [Anaerococcus hydrogenalis DSM 7454] Length = 248 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 31/287 (10%), Positives = 79/287 (27%), Gaps = 46/287 (16%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLK--LQKINGELEKIAVQELIVETLKKQEIEKS 93 + I +NG+ I+ D+ I ++ Q +N + EL+ + L + ++ Sbjct: 2 TEKQNEILAEVNGKKISQKDVVSFITQMQGGQQFLNPQGIHQIADELVNQELMYIDAIEN 61 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + D + L +++ + + Sbjct: 62 KLDQDKEFTDQV-------------------------------KLTKENMLKNYAMHLLF 90 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E+ K + + + + N+ + ++ Sbjct: 91 KDIKVSDDELKEYYDNNKEVIKQPKTYKASHILVDSEDEANKILEE----------IKAG 140 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAI 272 + K S G + + +F+ K + +NP +Q G I + Sbjct: 141 LEFEKAADKYSTDKASKGGDLGEFPQGAMVKEFEEALDKLDEGEISNPVKSQFGYHIIKL 200 Query: 273 CDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + +K + K ++ E K++ + Y Sbjct: 201 DHTHNAHLPEFNEIKDRIHDTLLMIKRQEKYLEKTNKIKEKVDVKKY 247 >gi|326563012|gb|EGE13287.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis 46P47B1] Length = 367 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 20/190 (10%), Positives = 58/190 (30%), Gaps = 8/190 (4%) Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-RTVLFSIPDNK 191 ++ +++ + K + + R +L + P + Sbjct: 163 ERAWLENEEATIAKLLEQKVIAKSPDKASCQNYYHANQVEFVSMPIMTLRHILLACPPQE 222 Query: 192 LQNQGFVQKRIKDAEESRL----RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + + ++K+ + + R ++++ G+ L + P+F+ Sbjct: 223 GEERIELKKQARQLIDRLNQSHNRDSDFIEFARRYSACPSKDDGGELGVLQKGSTVPEFE 282 Query: 248 NLLKKSQNNTT-NPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + + NP T+ G+ I + K++ + +Y Sbjct: 283 SAVFALPVGISINPIETRYGIHVIEVLQKQEGRQLSFEEAYPIIENHLKQQSFHHSLCDY 342 Query: 305 VKKLRSNAII 314 + +L A I Sbjct: 343 LFELSQKADI 352 >gi|326569386|gb|EGE19446.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis BC8] Length = 614 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 34/393 (8%), Positives = 85/393 (21%), Gaps = 88/393 (22%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT----DGDISKRI 60 + L + L LI + + ++ A+ + +V+ +++ Sbjct: 1 MRNFLKSWPGRLVLVGTLIPMAFLGVGTFGGHAIQPNELIKVGNQVVDVATFQAEVNAER 60 Query: 61 ALLKLQ------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 L Q L+++ ++ L + L + + G+T + + Sbjct: 61 NALIEQGVDASLINEHALQQLILKRLTDKALLENQASYLGMTVSDEMITQILQHYEVFHD 120 Query: 115 LSAEDFSSFLDKQGIGDNHFK------------------------------------QYL 138 F Q Sbjct: 121 NGQFSNDRFAAYLQQNGLTKDVLFAIERLRLSLRQLITGIVGTAIYPNSEVSKLIDLQLE 180 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ----- 193 A + D++ + + +I A + ++ ++ + + N L Sbjct: 181 AREVWVHRYHWQDYVDQVQISDAQIQAYFDEHQDKLIKPATVDLSYIELDPNVLSVGTPT 240 Query: 194 ----------------------------NQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 Q R + + + Sbjct: 241 EQEINAQYANYLRENGITDGRELAQILLTGPDAQNRAAKIQSKLNAGESFEALAKAHSDD 300 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK----SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G S + + S + P T G + + + Sbjct: 301 PSGSNGGVIGSFNPSVFGEYAAGVERALSGLSVGQISQPVQTGFGYHIFKVT---KVSND 357 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 A + Q + + L +A I Sbjct: 358 TPNIASMRDQLMDRAAKLKRDQAFADL--SAKI 388 >gi|319941683|ref|ZP_08016006.1| hypothetical protein HMPREF9464_01225 [Sutterella wadsworthensis 3_1_45B] gi|319804804|gb|EFW01666.1| hypothetical protein HMPREF9464_01225 [Sutterella wadsworthensis 3_1_45B] Length = 260 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 34/278 (12%), Positives = 75/278 (26%), Gaps = 47/278 (16%) Query: 43 RTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NGE ++ + Q ELE LI +T QE +K+ I +++ Sbjct: 25 AFKVNGETVSVAEQKAVYDRAVAQGQPAGPELESQVKNLLIQQTALLQEAKKAKIQQNAD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 Q + + ++ + Sbjct: 85 VQRAI------------------------------DNARNQILIQGLAQDWAKKNPVSDA 114 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 A + + EY +R +L + + K+ + + Sbjct: 115 DLQKAYEADKASYGDTEYQVRHIL-----------VKTEDQAKNLISRLAKGADFGKLAQ 163 Query: 221 KFASK-IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRD 277 +F+ + G +++ P F P TQ G + + KR Sbjct: 164 EFSEDTANKAQGGLLGWVVPRSFVPAFGAAFSALKPGEVAQAPVRTQFGFHVVKLEAKRK 223 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + A + ++ ++L A++ Sbjct: 224 AELYPSFDSQ-KAVIHNALANQKVQQHFQELIKRAVVK 260 >gi|88798823|ref|ZP_01114406.1| peptidyl-prolyl cis-trans isomerase D, putative [Reinekea sp. MED297] gi|88778586|gb|EAR09778.1| peptidyl-prolyl cis-trans isomerase D, putative [Reinekea sp. MED297] Length = 610 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 46/402 (11%), Positives = 106/402 (26%), Gaps = 90/402 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + S + ++I F + S S A +S T+NGE I++ + + + Sbjct: 1 MLDALRNSARGTAGKVIVGLIVITFTLFGAESIISIAGNSAP-ATVNGEDISEVEYQRLL 59 Query: 61 ALLK-------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-- 105 + + + + ++ LI + L+ Q +K + V Sbjct: 60 SRRQQELTSQFGAEAAAQLMNSSFVTDEIIESLISQELQMQLADKLAFDASEDQVVQSFA 119 Query: 106 -FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV---------------- 148 + S + + + L G F Q+ Sbjct: 120 DIPAFQIDGEFSQDRYLNVLAANGFNHQSFVAAQKEQAALAQFQSGVANSAFVVEKAIDR 179 Query: 149 -----------------KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 +++ + + E+ ++ + + E ++ +I + Sbjct: 180 YANLIAQERSFQYKAFESQNYLAQVEVSDGELRDYYEQNQEQFLSEESVKVRYLTISLDS 239 Query: 192 LQNQGFVQKRIKDAEES-----------------------------------RLRLPKDC 216 L Q V ++ +E + + Sbjct: 240 LAEQQSVTEQEIQSEYDSYVASLNEDNVREISHILFADGDDNQAEAQAALTRLNQGEEFA 299 Query: 217 NKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL--LKKSQNNTTNPYVTQKGVEYIAI- 272 + + + G L+ +F + + P TQ GV I + Sbjct: 300 DLASELSDDPGSAEFGGSLGELIPDVYVDEFYDAALELSEVGQVSAPVETQYGVHLIRLD 359 Query: 273 -CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + D ++ L A K ++ +L A Sbjct: 360 ALNASDPEPLSEVRDELVADIRERKAQEELLLVESQLSDAAF 401 >gi|222109651|ref|YP_002551915.1| ppic-type peptidyl-prolyl cis-trans isomerase [Acidovorax ebreus TPSY] gi|221729095|gb|ACM31915.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax ebreus TPSY] Length = 278 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 14/167 (8%), Positives = 48/167 (28%), Gaps = 8/167 (4%) Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL----RL 212 E + + +R + +++R + Sbjct: 99 EPSEEACRRYHAAHPTLGGQGERVRMRHVLFAVTPGVDVKLLRQRAEGVLLDLRCADDDG 158 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYI 270 + ++++ G +L D P+F + + + ++ G+ + Sbjct: 159 ARFAAAAGQWSNCPSGQEGGDLGWLSAEDCAPEFAREVFGTQEVGVLSRLVHSRFGLHVV 218 Query: 271 AICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 +C+++ ++A ++ +Y++ L A + Sbjct: 219 EVCERQPGQELPFEQVRASVALMLRQQAWVNALRQYLQLLAGEAEVE 265 >gi|121592871|ref|YP_984767.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax sp. JS42] gi|120604951|gb|ABM40691.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax sp. JS42] Length = 278 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 14/167 (8%), Positives = 48/167 (28%), Gaps = 8/167 (4%) Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL----RL 212 E + + +R + +++R + Sbjct: 99 EPSEEACRRYHAAHPTLGGQGERVRMRHVLFAVTPGVDVKLLRQRAEGVLLDLRCADDDG 158 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYI 270 + ++++ G +L D P+F + + + ++ G+ + Sbjct: 159 ARFAAAAGQWSNCPSGQEGGDLGWLSAEDCAPEFAREVFGTQEVGVLSRLVHSRFGLHVV 218 Query: 271 AICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 +C+++ ++A ++ +Y++ L A + Sbjct: 219 EVCERQPGQELPFEQVRASVALMLRQQAWVNALRQYLQLLAGEAEVE 265 >gi|67458647|ref|YP_246271.1| hypothetical protein RF_0255 [Rickettsia felis URRWXCal2] gi|75536887|sp|Q4UMV2|Y255_RICFE RecName: Full=Uncharacterized protein RF_0255; Flags: Precursor gi|67004180|gb|AAY61106.1| unknown [Rickettsia felis URRWXCal2] Length = 296 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 94/304 (30%), Gaps = 23/304 (7%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGEL 72 +L+I V + A I ++N E IT + R ++ + +L Sbjct: 4 LLLIIITVFFAFNVAQASLPNIVASVNYEPITLNEFRARKKMIMALNNVESLTPAQDKQL 63 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 +A++ LI E+L Q ++ + + +L + + + Sbjct: 64 SDLAIKSLIDESLLFQYAGDRE--IPQEEIDNAIKSIEDHNKMPHGSLLQYLKSRSVNPD 121 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 F + + I +++ + EI V + + Sbjct: 122 SFISQIKSELIKMNILSS-LSRSVQVSNKEIDVAILSSDQKDVEISMQVFTSKDGGNKAF 180 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 ++ R+K + + L + ++ K+ + + + Sbjct: 181 TQMNNLKNRLKKCADVKKSLYDNFATMQIITDKLSKIEG------------VKQTIVKDL 228 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 S + +N + E I +C K+ L Y+ T KI + + + +R A Sbjct: 229 SSDKASNVFEVNNKFEIILVCSKKILNVNEDENNYVVNFLTNKKISQKAQKMFENMRKKA 288 Query: 313 IIHY 316 +I Sbjct: 289 VIKI 292 >gi|304311294|ref|YP_003810892.1| Peptidyl-prolyl cis-trans isomerase D [gamma proteobacterium HdN1] gi|301797027|emb|CBL45240.1| Peptidyl-prolyl cis-trans isomerase D [gamma proteobacterium HdN1] Length = 641 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 18/196 (9%), Positives = 53/196 (27%), Gaps = 6/196 (3%) Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN-LEMEIPANKQKMKNITVRE 177 + + ++ ++ + + + F + EI +M Sbjct: 207 SDFDLTEYYEAHQDDYQSEERVKVSYVHLSQEQFAANDEPISDAEIQDKLDEMIKDAEGN 266 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQY 236 + + + A + + + G Y Sbjct: 267 ERRHAEHILFETGSKHSDAEARSLAEKALAELKAGKNFEELAKAQSEDFESAKNGGDLGY 326 Query: 237 LLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAIC--DKRDLGGEIALKAYLSAQN 292 P+F++ L ++ N+ + T+ G I + D+ L + ++ A+ Sbjct: 327 AGRGVYAPEFEDALFALQAPNDISGVVKTEFGYHIIKLIGVDEPPLPDMQKSRDHIIAEI 386 Query: 293 TPTKIEKHEAEYVKKL 308 +I + + + Sbjct: 387 RKERIASNIGTIIDDI 402 Score = 37.3 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 27/277 (9%), Positives = 66/277 (23%), Gaps = 22/277 (7%) Query: 47 NGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 N E I+D +I ++ + E E + + K + Sbjct: 243 NDEPISDAEIQDKLDEMIKDAEGNERRHA-------EHILFETGSKHSDAEARSLAEKAL 295 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF----MLKYGNLEME 162 + + D + + Y P+ F + Sbjct: 296 AELKAGKNFEELAKAQSEDFESAKNGGDLGYAGRGVYAPEFEDALFALQAPNDISGVVKT 355 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 L + + I + R+ + N L + Sbjct: 356 EFGYHIIKLIGVDEPPLPDMQKSRDHIIAEIRKERIASNIGTIIDDIDRMAFESNDLSEI 415 Query: 223 ASKIHDV--------SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274 +++ G + + + + ++ + G + D Sbjct: 416 SAQYDQKPEVSDWLTRKGGTGIFADPKVVEAAFSSEILQEQRNSDVIELEDGSLVVLRMD 475 Query: 275 KRDLGGE---IALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + E +K + Q +K ++ E K+L Sbjct: 476 QHEPVRELSLDEVKDKVREQVIASKAQELATEQAKEL 512 >gi|296112972|ref|YP_003626910.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis RH4] gi|295920666|gb|ADG61017.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis RH4] Length = 307 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 20/190 (10%), Positives = 61/190 (32%), Gaps = 8/190 (4%) Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM-KNITVREYLIRTVLFSIPDNK 191 ++ +++ + K + + ++ +R +L + P + Sbjct: 103 ERAWLENEEATIAKLLEQQVIAKSPDKASCQNYYHANQVEFVSTPIMTLRHILLACPPQE 162 Query: 192 LQNQGFVQKRIKDAEESRL----RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + + ++K+ + + R ++++ G+ L + P+F+ Sbjct: 163 GEERIELKKQARQLIDRLNQSHNRDSDFIEFARRYSACPSKDDGGELGVLQKGSTVPEFE 222 Query: 248 NLLKKSQNNTT-NPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + + NP T+ G+ I + K++ + +Y Sbjct: 223 SAVFALPVGISINPIETRYGIHVIEVLQKQEGRQLSFEEAYPIIENHLKQQSFHHSLCDY 282 Query: 305 VKKLRSNAII 314 + +L A I Sbjct: 283 LFELSQKADI 292 >gi|261886000|ref|ZP_06010039.1| foldase protein PrsA [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 268 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 35/279 (12%), Positives = 81/279 (29%), Gaps = 39/279 (13%) Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVE 83 I+ + + ++++ + T+NG+ ITD D++ + + + +++K + +I Sbjct: 5 VILALSLAAAVSLNAAVLATVNGQNITDEDLAPVLGPHGSETSNVPADMKKNLLDRVIER 64 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 L + +K GI D ++ Sbjct: 65 KLMLDQAKKDGIEKDDEFKK-------------------------------VVKELEDNV 93 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++ E + ++ K+ V + + K Sbjct: 94 AINIWMKKQFDAIKVDEKKAKDFYEQNKDKFVVPAQAKAKHILVETEKEAADIIKSLNGL 153 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPY 261 + + + K K V+ G+ + ES + F + + T P Sbjct: 154 KGAALDKKFSEIAKE--KSIDKSSAVNGGELGWFGESQMVASFSKAAFGLKKGEITNKPV 211 Query: 262 VTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTPTKIE 298 ++ G I D +D KA + Q + Sbjct: 212 KSEFGYHVILKEDMKDKSAVGFDKAKANIENQMKSEEFR 250 >gi|309973498|gb|ADO96699.1| Putative peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae R2846] Length = 622 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 46/395 (11%), Positives = 110/395 (27%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + + + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLTNSKVSKFILGLITVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 AL---LKLQKINGE-------------LEKIAVQELIV-----------------ETLKK 87 ++ Q+ L + V +I E +K+ Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 VK D M K + EI + + V+ ++ Sbjct: 181 VKNSAEVFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 185 ------------------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + Q ++ K A E + + + Sbjct: 241 ADNISRNLQVTDVEIAQYYQDNKAQFMTQHLAHIQFANEQDAKVAYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ E++L F++ + P + + +++ Sbjct: 301 AKSLDKISGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA ++ + +E K+ A Sbjct: 360 QSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394 >gi|326569504|gb|EGE19564.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis BC8] Length = 367 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 20/190 (10%), Positives = 61/190 (32%), Gaps = 8/190 (4%) Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM-KNITVREYLIRTVLFSIPDNK 191 ++ +++ + K + + ++ +R +L + P + Sbjct: 163 ERAWLENEEATIAKLLEQQVIAKSPDKASCQNYYHANQVEFVSTPIMTLRHILLACPPQE 222 Query: 192 LQNQGFVQKRIKDAEESRL----RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + + ++K+ + + R ++++ G+ L + P+F+ Sbjct: 223 GEERIELKKQARQLIDRLNQSHNRDSDFIEFARRYSACPSKDDGGELGVLQKGSTVPEFE 282 Query: 248 NLLKKSQNNTT-NPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + + NP T+ G+ I + K++ + +Y Sbjct: 283 SAVFALPVGISINPIETRYGIHVIEVLQKQEGRQLSFEEAYPIIENHLKQQSFHHSLCDY 342 Query: 305 VKKLRSNAII 314 + +L A I Sbjct: 343 LFELSQKADI 352 >gi|209963457|ref|YP_002296372.1| peptidyl-prolyl cis-trans isomerse, putative [Rhodospirillum centenum SW] gi|209956923|gb|ACI97559.1| peptidyl-prolyl cis-trans isomerse, putative [Rhodospirillum centenum SW] Length = 622 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 33/384 (8%), Positives = 93/384 (24%), Gaps = 81/384 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + ++ +I + ++ F + I + R + IT ++ + Sbjct: 1 MLQAIRSTAGSWIAKILFILLIASFAVWGIGDFTRGLG--RHVAEVGDVQITPQELDQEF 58 Query: 61 A-------------LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 L Q L + +Q+++ TL + G+ V Sbjct: 59 RDEVTRLRRVMGADLTAEQARAFGLLERTLQQMVQRTLVSLAGQDKGLMPSDAMVADEIR 118 Query: 108 ----QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV--------------- 148 H + + + L + G+ + + + ++ Sbjct: 119 RVPVFHNQLGQFDPDLMRALLRQNGMTEQGLVEQVRADMARGQLLGSVSIGAILPTTLAE 178 Query: 149 -------KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + +P ++ + + R V ++ P+ + + Sbjct: 179 TLFRFRNEKRVADLITVPATAMPEPAAPDASVLAQYHQDRAVRYTAPEYRSLTVAKLTAE 238 Query: 202 IKDAEESRLRLPKDCNKLEKFA----------------------SKIHDVSIG------- 232 + + + + + S V+ G Sbjct: 239 AIAGDITVSDADIEQAYSARASEFVAPERRAVVQAVLPDEAAAKSVADAVAGGASLEQAA 298 Query: 233 --------KAQYLLESD-LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 + L + + SQ + P + G + + G Sbjct: 299 KAAAAEAIDLGEVTRDQLLPELVEPVFGLSQGAISAPVESTLGWHVLTVRGI--TPGHER 356 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKK 307 A + Q ++ + + + Sbjct: 357 PLAEVRDQVVADLRKERALDRLYE 380 >gi|116329122|ref|YP_798842.1| hypothetical protein LBL_2545 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330269|ref|YP_799987.1| hypothetical protein LBJ_0534 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116121866|gb|ABJ79909.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123958|gb|ABJ75229.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 359 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 41/333 (12%), Positives = 99/333 (29%), Gaps = 25/333 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKR---- 59 + ++ +F F + + + A S +R+ T+ I++ D+ Sbjct: 12 IRPQMNSKQTYAKNFFFTGTFVFLFLQNPIQTAESLNRVIATVGTISISELDLDDASEKY 71 Query: 60 ---IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-- 114 LK + L + LI + E+ I + V+ + G Sbjct: 72 TKLQKHLKHEDFRKSLRTRIIDFLIDRAIVDVVAEEESIQVNEQRVDAEIEKRMEVMGIT 131 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 + + G+ + L Q +++ + E EI + + ++ Sbjct: 132 NRKQFEKAMETSSGMPFELWVTELPYQIKKGQLLQLKIAV-PPPSEQEIKSWYNQNRDKV 190 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--- 231 E R + + + + K+ + R + D + A + Sbjct: 191 GFEIRYRII---SIAPENDSIQEENRLYKELSDIRKSVLADPSSFALIAGSPRNDPTLRS 247 Query: 232 --GKAQYLLESDLHPQFQNLL----KKSQNNTTNPYVTQKG-VEYIAICDKRDLGGEIAL 284 G +++ DL+ + + + ++ + I KR L Sbjct: 248 RRGMVEWISSFDLYKYSKITATIAAPLPNGGVSEVFRDERKRYSILKIEGKRPTPM-ENL 306 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + K E ++K+ R+ I + Sbjct: 307 RGGIQNILYRDKEEDTFYRWLKESRAEIPIQIF 339 >gi|319762261|ref|YP_004126198.1| ppic-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus denitrificans BC] gi|330825811|ref|YP_004389114.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus denitrificans K601] gi|317116822|gb|ADU99310.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus denitrificans BC] gi|329311183|gb|AEB85598.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus denitrificans K601] Length = 261 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 31/303 (10%), Positives = 74/303 (24%), Gaps = 45/303 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + + + + I +NG+ + + L++ Sbjct: 1 MKKQLLSGLVAAAMLGTMALPVAAQNI-AIVNGKAVPK-------------ERAEALKQQ 46 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 E + + V Sbjct: 47 V------ERAGRPVTPEMENQIKEEVVAREIFMQEAQKRGLEGTADY---------KTQM 91 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + ++ + + + +EY +L Sbjct: 92 ELARQTILIRELFVDFQKNNPVTDAEIQAEYDKFVAANAGKEYKASHIL----------- 140 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKS 253 + K S + K + +K + G + P+F + L+K Sbjct: 141 VAKEDEAKSIIASIKKGAKFEDIAKKQSKDPGSGARGGDLDWANPGSYVPEFTEALVKLE 200 Query: 254 QNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + T P +Q G I + D RD + Q ++ A++ + LR+ A Sbjct: 201 KGKMTQTPVKSQFGWHVIRLDDVRDAQL--PKLDEVKPQIAQQLQQQKLAKFQEDLRAKA 258 Query: 313 IIH 315 + Sbjct: 259 KVE 261 >gi|160896759|ref|YP_001562341.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Delftia acidovorans SPH-1] gi|160362343|gb|ABX33956.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Delftia acidovorans SPH-1] Length = 311 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 19/311 (6%), Positives = 72/311 (23%), Gaps = 44/311 (14%) Query: 16 LTTYFVLIIFC--IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK------LQK 67 L F+ + C ++ + + + + + + G +T D+ + L Sbjct: 14 LRQGFLSLALCTPVLALAAQPAAGQPAAVLASGAGVSVTVDDLQADAQRIPPEVRAGLLA 73 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 + +IA L+ + ++ + Sbjct: 74 RPQNVSQIADNLLVRRVMAQKAQAQGL-------------------------------GN 102 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + + + + + + + + Sbjct: 103 NAVAQAALNVARDKILSDAWL-AKIDADNTPSAAAAEGQARNIYKAHPERFAVEEQVHVR 161 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQF 246 + + + ++ + K G + + + P+F Sbjct: 162 HILIAGTDDAARAQAEKLVAELRGGADFAALAKERSADKGSAARGGDLGFFGKDKMVPEF 221 Query: 247 QNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAE 303 + +N + ++ G + + D++ ++ L + + Sbjct: 222 EQAAFALKKNEISGAVQSKFGFHVLQLLDRKPAGQQSFSEVREALVKEVIEQAQAEGRVA 281 Query: 304 YVKKLRSNAII 314 +R + Sbjct: 282 AANAIRKEFKV 292 >gi|222474770|ref|YP_002563185.1| hypothetical protein AMF_031 [Anaplasma marginale str. Florida] gi|255002737|ref|ZP_05277701.1| hypothetical protein AmarPR_00174 [Anaplasma marginale str. Puerto Rico] gi|255003870|ref|ZP_05278671.1| hypothetical protein AmarV_00169 [Anaplasma marginale str. Virginia] gi|222418906|gb|ACM48929.1| Conserved hypothetical protein [Anaplasma marginale str. Florida] Length = 401 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 90/280 (32%), Gaps = 14/280 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA---LLKLQKINGEL 72 + Y + V + S+ A S RI+ ++G+ IT D+S+R G Sbjct: 1 MLRYLLCCCALCVILASHHCCASSVRIKAVVDGKAITSLDVSRRTKANAFFYKTAHAGSD 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + +Q L+ E++ + E ++ GI+ + + G+ Q D+ Sbjct: 61 QGEVLQSLVDESVLELEAKELGISVGKRELEAEASKMFSVLGVCDGLSVGECVVQNGLDH 120 Query: 133 HFKQYL-AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + IW ++ + ++ + K+ + L +F Sbjct: 121 KSVEDHLRSRVIWSKILATRVAPFLAVSDSDVENYVDEAKSAGLETVLDLEQVFVPFKAG 180 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + + K + ++ + +A + + L +L+K Sbjct: 181 NVLDSVLSELNKGV--ALDKIASRYREHAVYADRA-------VGVTASAFLPDVKISLVK 231 Query: 252 KSQNNTTNPYVTQKGVEYIAICDK-RDLGGEIALKAYLSA 290 P +G + + +K + G + A + Sbjct: 232 AKVGQVIGPIRIDRGYLVLKLLNKVKVSKGFLNSSASIKR 271 >gi|126445541|ref|YP_001062970.1| rotamase [Burkholderia pseudomallei 668] gi|126225032|gb|ABN88537.1| peptidylprolyl isomerase [Burkholderia pseudomallei 668] Length = 220 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 33/104 (31%), Gaps = 3/104 (2%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN-NTTNPYVTQK 265 ++ +F++ S G ++ + L + +N + + P Sbjct: 112 NQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDEARNEIDAIVKSGFSMPIRGSN 171 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 G + + DKRD+ + Q ++ +LR Sbjct: 172 GYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 213 >gi|120555992|ref|YP_960343.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinobacter aquaeolei VT8] gi|120325841|gb|ABM20156.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinobacter aquaeolei VT8] Length = 268 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 10/165 (6%), Positives = 46/165 (27%), Gaps = 6/165 (3%) Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFS---IPDNKLQNQGFVQKRIKDAEESRLRLP 213 E + ++ PD+ + + + Sbjct: 91 DPSEQDCERFYAANPGRFCSPTIMAVSHILLAAAPDDIEERMRQEEAGRQLLSALLDGRS 150 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 + +++++ G + + +F+ + ++ ++ G + + Sbjct: 151 QFNELAKQYSACESRHQGGSLGQISKGQTVEEFERPVLSLNEGLHPELIESRYGWHIVRV 210 Query: 273 CDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +L +K + + + + +Y++ L + + Sbjct: 211 DQRINGELLPYEHVKPQIRQYLSESVTRRAFRQYLQVLAAETGVE 255 >gi|326575303|gb|EGE25231.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis CO72] Length = 614 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 34/393 (8%), Positives = 85/393 (21%), Gaps = 88/393 (22%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT----DGDISKRI 60 + L + L LI + + ++ A+ + +V+ +++ Sbjct: 1 MRNFLKSWPGRLVLVGTLIPMAFLGVGTFGGHAIQPNELIKVGNQVVDVATFQAEVNAER 60 Query: 61 ALLKLQ------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 L Q L+++ ++ L + L + + G+T + + Sbjct: 61 NALIEQGVDASLINEHALQQLILKRLTDKALLENQASYLGMTVSDEMITQILQHYEVFHD 120 Query: 115 LSAEDFSSFLDKQGIGDNHFK------------------------------------QYL 138 F Q Sbjct: 121 NGQFSNDRFAAYLQQNGLTKDVLFAIERLRLSLRQLITGIVGTAIYPNSEVSKLIDLQLE 180 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ----- 193 A + D++ + + +I A + ++ ++ + + N L Sbjct: 181 AREVWVHRYHWQDYVDQVQISDAQIQAYFDEHQDKLIKPATVDLSYIELDPNVLSVGTPT 240 Query: 194 ----------------------------NQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 Q R + + + Sbjct: 241 EQEINAQYANYLRENGITDGRELAQILLTGPDAQNRAAKIQSKLNAGESFEALAKAHSDD 300 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK----SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G S + + S + P T G + + + Sbjct: 301 PSGSNGGVIGSFNPSVFGEYAAGVEQALSGLSVGQISQPVQTGFGYHIFKVT---KVSND 357 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 A + Q + + L +A I Sbjct: 358 TPNIASMRDQLMDRAAKLKRDQAFADL--SAKI 388 >gi|221210892|ref|ZP_03583872.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans CGD1] gi|221169848|gb|EEE02315.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans CGD1] Length = 306 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 69/283 (24%), Gaps = 55/283 (19%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 +NG IT I + + + K L +LI L +Q K V Sbjct: 65 VNGVPITQAQIDEAVRVSKAPDTPA-LRTALKNQLIARELFRQAALKQHYDTKPQVVAAV 123 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 A +D + + ++ A Sbjct: 124 -------------------------------EQAKTLAMTQAYLSDQVKPVPVTDADVKA 152 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + +V+ + + K + ++F+ Sbjct: 153 RYDAIVATLGENEYKPSVIAVNDADTAKQIIARLK----------KGEDFAKLAQQFSKG 202 Query: 226 IHDVSIGKAQYL----------LESDLHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICD 274 G ++ ++ P + L+K Q T P + D Sbjct: 203 PAAAQGGALNWISFKTPIEAGHTQNWPQPLAEALVKLPQGGLTREPVQVGDAYWIVRADD 262 Query: 275 KRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 KR + K L Q +EK A+ V L A I Sbjct: 263 KRPTQVPTFDQAKDTLRQQLEQVAMEKATAQVVADLIRGARIQ 305 >gi|326561196|gb|EGE11561.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis 7169] Length = 367 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 20/190 (10%), Positives = 61/190 (32%), Gaps = 8/190 (4%) Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM-KNITVREYLIRTVLFSIPDNK 191 ++ +++ + K + + ++ +R +L + P + Sbjct: 163 ERAWLENEEATIAKLLEQQVIAKSPDKASCQNYYHANQVEFVSTPIMTLRHILLACPPQE 222 Query: 192 LQNQGFVQKRIKDAEESRL----RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + + ++K+ + + R ++++ G+ L + P+F+ Sbjct: 223 GEERIELKKQARQLIDRLNQSHNRDSDFIEFARRYSACPSKDDGGELGVLQKGSTVPEFE 282 Query: 248 NLLKKSQNNTT-NPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + + NP T+ G+ I + K++ + +Y Sbjct: 283 SAVFALPVGISINPIETRYGIHVIEVLQKQEGRQLSFEEAYPIIENHLKQQSFHHSLCDY 342 Query: 305 VKKLRSNAII 314 + +L A I Sbjct: 343 LFELSQKADI 352 >gi|293376704|ref|ZP_06622927.1| putative foldase protein PrsA [Turicibacter sanguinis PC909] gi|292644661|gb|EFF62748.1| putative foldase protein PrsA [Turicibacter sanguinis PC909] Length = 544 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 27/251 (10%), Positives = 71/251 (28%), Gaps = 9/251 (3%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 ++ V++L E + + D++ + + + ++F Sbjct: 241 KTNEKEYTVEDLYNELVPAYGLSTGISILDTHLLEDKYSYDEKEVKALIDEFKVNWGSNY 300 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + I+ + + A Y T S Sbjct: 301 YAYMAQYGLMNDEEIFN------YFKLAALQDAAFAAEYPITDEQLQAAYNEYTPNISAR 354 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 ++++ + I + + + K ++++ + G + + +F+N Sbjct: 355 HILVEDEETAKDLIAQLDAAEDKEAKFEELAKEYSKDGSASNGGDLGSFGKGQMVSEFEN 414 Query: 249 LLKK-SQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK-HEAEYV 305 + T P TQ G I + + LK L + + + Sbjct: 415 AAFALNVGEYTEEPVKTQYGYHVIYKYAEDEKPSFDDLKDELETTIRSEEYTQLKLEAIL 474 Query: 306 KKLRSNAIIHY 316 K R+ A + + Sbjct: 475 IKYRTEANVKF 485 >gi|291279447|ref|YP_003496282.1| peptidyl-prolyl cis-trans isomerse D [Deferribacter desulfuricans SSM1] gi|290754149|dbj|BAI80526.1| peptidyl-prolyl cis-trans isomerse D [Deferribacter desulfuricans SSM1] Length = 626 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 33/266 (12%), Positives = 91/266 (34%), Gaps = 11/266 (4%) Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 T + I L + L +V + E K E T + + + + Sbjct: 143 TPASFERSIKADLLVQKTKNLITQSVS--VNENEIKNEYIYRNKTAKISYIKLNSEKFKK 200 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 + + E+ ++ +K ++ I+ + + DF + + EI + Sbjct: 201 DVTYNDEELKAYFEKN---KEDYRVPEKIKLKYIKIDPKDFNKEIKVSDEEIEKYYLQHT 257 Query: 172 NITVREYL---IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + + ++ N + +K+I++ + + K + +K++ Sbjct: 258 DEFIEKEKVAAKHILIRVKDWNNKKEVAEAKKKIENILQKIKKGAKFEDLAKKYSDDPTA 317 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALK 285 + G Y + + +F++++ K + ++ T+ G I + + K Sbjct: 318 KNGGDLGYFTKGQMIKEFEDVVFKLKPGDISDIVKTKFGYHIIKVYGHKPEKKLTLDEAK 377 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + K + + EYV + + Sbjct: 378 PLIIKKLKTLKKDSYFKEYVLDIYRD 403 Score = 45.8 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 32/316 (10%), Positives = 76/316 (24%), Gaps = 18/316 (5%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M L+ F+ L+ F+ IF + + + + I +N I+ + + Sbjct: 4 MFRNQKKILAFFLWLVIAAFIGTIFLVWGVGGNRGRQKNYAI--KVNDFEISFNEYQQEY 61 Query: 61 ALLKLQKING---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 + + K +I + L + K G+ V Sbjct: 62 DKFSNTLKSLLGGEIPNTININKQVTDSIIEKYLLLDQANKLGVFVSDVEVFNEIKNIPS 121 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 D +++ + + V K ++ E + + Sbjct: 122 FQTNGQFDAKRYVEILRLNGLTPASFERSIKADLLVQKTKNLITQSVSVNENEIKNEYIY 181 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 + + + K + + R+P+ KL+ D + Sbjct: 182 RNKTAKISYIKLNSEKFKKDVTYNDEELKAYFEKNKEDYRVPEKI-KLKYIKIDPKDFN- 239 Query: 232 GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 + + + + I + D + K + Sbjct: 240 -----KEIKVSDEEIEKYYLQHTDEFIEKEKVAAKHILIRVKDWNNKKEVAEAKKKIENI 294 Query: 292 NTPTKIEKHEAEYVKK 307 K + KK Sbjct: 295 LQKIKKGAKFEDLAKK 310 Score = 42.4 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 15/131 (11%), Positives = 37/131 (28%), Gaps = 3/131 (2%) Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 D + K + + + +K + + Sbjct: 490 NDYINDKSVELAKDNALSLIKKYNELQKIADSKKLSITTTPDFKRIDPIPDIGTNEELSK 549 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDL---GGEIALKAYLSAQNTPTKIEKHEAEY 304 + K + P+V + I + + + K + + K ++ Y Sbjct: 550 KIFNKGKGLLETPFVVGNNIFIIEVNNIKYPDFSKITEDEKKEIESYILSIKQDEALNSY 609 Query: 305 VKKLRSNAIIH 315 ++KL++NA I Sbjct: 610 IEKLKNNAKIE 620 >gi|157691720|ref|YP_001486182.1| peptidylprolyl isomerase PrsA [Bacillus pumilus SAFR-032] gi|157680478|gb|ABV61622.1| peptidylprolyl isomerase PrsA [Bacillus pumilus SAFR-032] Length = 292 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 88/301 (29%), Gaps = 44/301 (14%) Query: 21 VLIIFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79 L V +++ + + + + T +T ++ + + A+ Sbjct: 5 ALAAVTAVSVLTLGACSSGDKDVIATTKSGDVTKEELYTTLK--------KQAGGDALNL 56 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 L+ + + + + S D Y ++F K Y+ Sbjct: 57 LVQQKVLADKYKVSDKEIDKKMEEYKKTLGEDRLKQLQDEF-------------GKDYIK 103 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 Q + + + + E+ A +K +++ + Sbjct: 104 DQVKYELLTQKAAKANIKITDKEVKAYYDDLKGKIRASHIL---------------VADK 148 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYL-LESDLHPQF-QNLLKKSQNN 256 K + E+ + K + ++++ G + E + F + K N Sbjct: 149 KTADEVEKKLDKGEKWDAVVSEYSTDTASAAQGGDVGWFAKEGQMDENFSKAAFKLKVNE 208 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314 + P +Q G I ++R G +KA L + K + KL +A + Sbjct: 209 ISKPVKSQFGYHIIKKTEER--GKYDDMKADLKKELLDQKQADTNEIQTILNKLVKDADV 266 Query: 315 H 315 Sbjct: 267 K 267 >gi|325914922|ref|ZP_08177254.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas vesicatoria ATCC 35937] gi|325538815|gb|EGD10479.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas vesicatoria ATCC 35937] Length = 685 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 13/148 (8%), Positives = 47/148 (31%), Gaps = 4/148 (2%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++K + + + L +L + + + K K A +++ + Sbjct: 303 KRYEEEKARFVEPDQRLASHILITAGSDAAAQKAAEAKAAKLAADAKQPGADFAALAKAN 362 Query: 223 ASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + + G ++ + + F++ + P ++ G I + + + G Sbjct: 363 SQDPGSKDAGGDLGWVEKGTMVKPFEDALFSMKAGDVVGPIKSEFGYHVIQLREVKGGQG 422 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + Q +++ + + Sbjct: 423 KS--FEQVRDQFAAEQLKADADKAYADI 448 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/192 (11%), Positives = 47/192 (24%), Gaps = 34/192 (17%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-------------- 46 M K+ S +I ++I F V SY ++ + Sbjct: 30 MLQKLRDKTSGWIATAILGLLMIPFLFVIDNSYLGGIGANN-VAKVQAPPTWWKSAPTWW 88 Query: 47 ------NGEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++Q+ + EK + +L+ E + + Sbjct: 89 PVSLLWQHHEISTQDFRARFEQARMQERQRQGEKFDPRTFESRENKLQVLDQLVDEQVVR 148 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E +GI TV + + G + + Sbjct: 149 LGAEDAGIVIGDATVRDYITNIQAFQVDGKFSPDQYRAALAQGTPPRTPAQFDALVRDSL 208 Query: 148 VKNDFMLKYGNL 159 ++ Sbjct: 209 QQSVIPQAVAES 220 >gi|303251064|ref|ZP_07337250.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252639|ref|ZP_07534532.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650074|gb|EFL80244.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859884|gb|EFM91904.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 625 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 27/400 (6%), Positives = 85/400 (21%), Gaps = 89/400 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + F L+ V +NG IT + Sbjct: 1 MIENMHERTKGPV--FKIIFALVSLSFVITGIGTGLVGGDTAAVKVNGTEITQQAFNAAK 58 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + L+ E L +Q ++ + + + Sbjct: 59 NRQQSVLNAQMGERFWDLLDTPEYAKQFNQSVLNGLVDEELLRQYAKELKLGISAEQIKS 118 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE- 160 ++ S + + L G+ + + + ++ + + ++ E Sbjct: 119 EIVNSPVFQQDGKFSNDLYQQTLRSNGLSADGYAAIVNEGMLFSQIQEGVIGSEFNVPEQ 178 Query: 161 --------------------------------MEIPANKQKMKNITVREYLIRTVLFSIP 188 E+ K+ + + ++ Sbjct: 179 EALLAKLLLQKRQVRLANYSIAKEATNQTASAEELQKYYDAHKSELIEPEKLMVEYVTLT 238 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLP---------------------------KDCNKLEK 221 + N V + + K+ + Sbjct: 239 PTDVANNVQVNDEQVKTYYEKNKADYATKGETRSAHIQLANETDAKAVAEQVKNGADFAE 298 Query: 222 FASKIH-----DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 A G + F+ + I + ++ Sbjct: 299 LAKTKSTDKLSAAQGGDLGWAKAGTFPKAFEAAAASLQDGQVSAVVNVDGAYHIIKVLER 358 Query: 276 R--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + +K ++ + + +++ + A Sbjct: 359 KAETVIPLEQVKDQITKTIRQELLLTEYSNIAREMANRAF 398 >gi|329123025|ref|ZP_08251596.1| peptidyl-prolyl cis-trans isomerase [Haemophilus aegyptius ATCC 11116] gi|327471956|gb|EGF17396.1| peptidyl-prolyl cis-trans isomerase [Haemophilus aegyptius ATCC 11116] Length = 622 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 47/395 (11%), Positives = 110/395 (27%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + I + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLTNSKISKFILGLITVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 AL---LKLQKINGE-------------LEKIAVQELIV-----------------ETLKK 87 ++ Q+ L + V +I E +K+ Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 VK D M K + EI + + V+ ++ Sbjct: 181 VKNSAEVFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 185 ------------------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + Q ++ K A E + + + Sbjct: 241 ADNISRNLQVTDVEIAQYYQDNKAQFMTQHLAHIQFANEQDAKVAYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ E++L F++ + P + + +++ Sbjct: 301 AKSLDKISGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA ++ + +E K+ A Sbjct: 360 QSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394 >gi|229843938|ref|ZP_04464079.1| peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae 6P18H1] gi|229812932|gb|EEP48620.1| peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae 6P18H1] Length = 622 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 46/395 (11%), Positives = 110/395 (27%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + + + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLTNSKVSKFILGLITVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 AL---LKLQKINGE-------------LEKIAVQELIV-----------------ETLKK 87 ++ Q+ L + V +I E +K+ Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 VK D M K + EI + + V+ ++ Sbjct: 181 VKNSAEVFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 185 ------------------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + Q ++ K A E + + + Sbjct: 241 ADNISRNLQVTDVEIAQYYQDNKAQFMTQHLAHIQFANEQDAKVAYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ E++L F++ + P + + +++ Sbjct: 301 AKSLDKISGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA ++ + +E K+ A Sbjct: 360 QSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394 >gi|307544940|ref|YP_003897419.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halomonas elongata DSM 2581] gi|307216964|emb|CBV42234.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halomonas elongata DSM 2581] Length = 607 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 18/255 (7%), Positives = 64/255 (25%), Gaps = 9/255 (3%) Query: 63 LKLQKINGELEKIAVQEL-IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-DF 120 + Q + Q L + E + E + + E Sbjct: 145 FRDQLRADMKRRQLQQGLAVSEFSLESEERRLAALQRQTRSFRHHALTVDDLESRPEASE 204 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + +++ ++ + + + + E ++ Sbjct: 205 QELQAYYEAHADDYQRPEQVKLAYVVLDREQMAEQADVSEQDLRDAWNAEAAEA----DR 260 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLE 239 R + + + + R+++ + + +++ G + Sbjct: 261 RVSHIMVRFGDQRTRQEAEARLEEVRQRLADGASFADLAAEYSDDTSTSDEGGDLGVISR 320 Query: 240 SDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 F + + ++ T G+ I + + D + L+ Q ++ Sbjct: 321 GFFGEAFDEAAFSLGEGQVSDIVETDNGLHLIKVTEL-DRPSFEESRDRLARQVARKQVS 379 Query: 299 KHEAEYVKKLRSNAI 313 + ++L + Sbjct: 380 TAFDDRAQRLIDESF 394 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 29/302 (9%), Positives = 74/302 (24%), Gaps = 19/302 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR--IRTTINGEVITDGDISK 58 M + + + + V++ + S + +NGE I + Sbjct: 1 MLQSIRDRSASWGAKIIIGAVVVAMALFGAESLVGLLGGNDGDSVAKVNGESIPRQQLEL 60 Query: 59 RIALLKLQ-----KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 + + EL + LI E L Q E+ G+ + ++ V Sbjct: 61 EVQRAIRSGQVPPEQERELRSQMLDSLISERLLTQYAEEGGLHLSESQIDQLIVNLPEFQ 120 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML-KYGNLEMEIPANKQKMKN 172 + + Q + +E + Sbjct: 121 DQDGKFSRELFRNRLSSAGFTPLAFRDQLRADMKRRQLQQGLAVSEFSLESEERRLAALQ 180 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 R + + +++ + + +A + P+ + Sbjct: 181 RQTRSFRHHALTVDDLESRPEASEQELQAYYEAHADDYQRPEQVKLAYVVLDREQMAEQA 240 Query: 233 KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292 + E DL + ++ ++ + + G D+R A + + Sbjct: 241 D---VSEQDLRDAWNAEAAEADRRVSH-IMVRFG-------DQRTRQEAEARLEEVRQRL 289 Query: 293 TP 294 Sbjct: 290 AD 291 >gi|254183780|ref|ZP_04890372.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia pseudomallei 1655] gi|184214313|gb|EDU11356.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia pseudomallei 1655] Length = 240 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 3/104 (2%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN-NTTNPYVTQK 265 ++ +F++ S G ++ + L +N + + P Sbjct: 132 NQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGSN 191 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 G + + DKRD+ + Q ++ +LR Sbjct: 192 GYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 233 >gi|170702053|ref|ZP_02892969.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria IOP40-10] gi|170133039|gb|EDT01451.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria IOP40-10] Length = 644 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 22/273 (8%), Positives = 59/273 (21%), Gaps = 22/273 (8%) Query: 53 DGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 D+ + LL Q + ++ L ++ + + + R Sbjct: 133 SIDVERYAQLLSFQGMTPEQYQERVRYSLALQQIPASIVASAFTPKGPAQRLSELAAQQR 192 Query: 112 NTGLSAEDFSSFLDKQGIGDNH---FKQYLAIQSIWPDVVKNDF--------MLKYGNLE 160 + K D + P+ + + Sbjct: 193 EVQALVLKTGDYAAKVQPTDAQLTAYYDAHKQSFATPETATIQYLVYSPAAAAASAQPTD 252 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +I E +R I + AE+ + ++ Sbjct: 253 ADIKKFYDDNPTHFRSEAQVRVSHIFIAAASDASAADKAAAKAKAEQLLADVKAHPDQFA 312 Query: 221 KFA-----SKIHDVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 + A G ++ Q + + + G + Sbjct: 313 QIAQKDSQDAPSAAKGGDLGFITRGSTAGGKAFDDAAFALKQGDVSGVVQSDLGFHILKA 372 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAE 303 + + + +K +++ Q K + Sbjct: 373 TEVKPSVVKPFADVKDHIAVQLKQQYAAKAFTD 405 Score = 45.8 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 20/211 (9%), Positives = 52/211 (24%), Gaps = 15/211 (7%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------GELE 73 V I ++ + S +NG IT + Q E Sbjct: 26 FVGIQGFRGFFDDSANVAAVNGHKITRVEFDGAFRQQIDQARQALGGQFDIKAFDTPEHR 85 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--QHARNTGLSAEDFSSFLDKQGIGD 131 K + LI + + E ++ +T N V + + Q + Sbjct: 86 KQVLDGLIQQRVLADETQRLHLTASDNAVRDALMSDPMIASLKKPDGSIDVERYAQLLSF 145 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + Q++ + ++ ++ ++ D Sbjct: 146 QGMTPEQYQERVRYSLALQQIPASIVASAFTPKGPAQRLSELAAQQREVQALVLKTGDYA 205 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q + + + ++ Sbjct: 206 AKVQPTDAQLTAYYDAHKQSFATPETATIQY 236 >gi|261493077|ref|ZP_05989616.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261311256|gb|EEY12420.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 623 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 28/400 (7%), Positives = 90/400 (22%), Gaps = 89/400 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + + F L+ V +NGE I+ + + Sbjct: 1 MIEKMHERTNGPV--FKIIFALVSISFVIGGIGTGLISQDNSVAKVNGEEISQQLFNNTL 58 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + + LI E L +Q ++ + ++ + Sbjct: 59 NREQNRLNAELGSRFWDLMDSPEYAAQFNQSVLNGLIDEELLRQYAKELKLGISADQIKS 118 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG---- 157 ++ S E + L + + + + + + + + Sbjct: 119 EIVNSQMFQQDGKFSNELYQQTLRHNNLSADGYAAIVQEGMLQSQLQEGIINSDFNVPAQ 178 Query: 158 -----------------------------NLEMEIPANKQKMKNI--------------- 173 E E+ A + K Sbjct: 179 QALLAKLLLQQREVRLAEFSVAKEMENQTVSEQELRAYYEANKTKLLAPEKLAVEYVTLS 238 Query: 174 ----TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD------------CN 217 + + + + D + + + Sbjct: 239 PKDVESKVEITNEQIQTYYDRNKADYVTKGEAHLAHIQVASEAEAQAIEQALKNGEDFAT 298 Query: 218 KLEKFASKIHDVSIG-KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 + +S + G + F++ + + + I + ++ Sbjct: 299 LAKNKSSDTLSANNGGDLGWAKAGTFPKAFEDAVANLTAGQMSAAVKVDNAYHIIKVLER 358 Query: 276 RDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + +K ++ + + +++ + A Sbjct: 359 KPEQVIELAQVKDKIAQTIRQELVLTEYSTVAREMANKAF 398 >gi|119897994|ref|YP_933207.1| putative cell binding factor [Azoarcus sp. BH72] gi|119670407|emb|CAL94320.1| putative cell binding factor [Azoarcus sp. BH72] Length = 260 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 35/273 (12%), Positives = 71/273 (26%), Gaps = 47/273 (17%) Query: 47 NGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 NG I +A + Q + N +L +EL+ + QE K GI ++ Sbjct: 31 NGTAIPAARSEAMLAEQRAQGAQDNPQLRDAVREELVRREVLSQEAGKKGIDKKADIQAQ 90 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + +++ Sbjct: 91 ------------------------------MDMAKQAVLIRAYLQDYVKNNPVTDAELKK 120 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + +EY R VL ++ K+ K + ++ Sbjct: 121 EYDSIKSRMGDKEYKPRHVL-----------VESEEHAKEIIGKLNGGAKFDDLAKESRD 169 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEI 282 G + F + + K + T P + G I + D R+L Sbjct: 170 PGSKDKGGDLGWTTPDRFVKPFSDAMVKLEKGKYTAAPVKSDYGFHVIMLDDVRELKA-- 227 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + Q ++ +++ LR+ A + Sbjct: 228 PPFEEVKPQLQQRLQQQKVEKHILDLRTKAKVQ 260 >gi|126665822|ref|ZP_01736803.1| Parvulin-like peptidyl-prolyl isomerase [Marinobacter sp. ELB17] gi|126629756|gb|EBA00373.1| Parvulin-like peptidyl-prolyl isomerase [Marinobacter sp. ELB17] Length = 268 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 9/165 (5%), Positives = 46/165 (27%), Gaps = 6/165 (3%) Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP--- 213 E + ++ + +++ + + Sbjct: 91 DPTEQDCERFFNANPRRFCSPVVMAVSHILLAAAPDDVAELMRQEEVGDQLLKALFEGRS 150 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAI 272 + + +++++ G + + +F+ + + + T+ G + + Sbjct: 151 RFDDLAKQYSACESRHQSGSLGQISKGQTVDEFERPVLNLKEGLHSGLIETRYGYHIVRV 210 Query: 273 CDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +K + + + + +Y++ L + A + Sbjct: 211 DQRIDGQPLPYEHVKPKIRQYLSESVTRRACRQYLQVLAAEAGVE 255 >gi|326561079|gb|EGE11444.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis 7169] Length = 614 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 34/393 (8%), Positives = 86/393 (21%), Gaps = 88/393 (22%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT----DGDISKRI 60 + L + L LI + + ++ A+ + +V+ +++ Sbjct: 1 MRNFLKSWPGRLVLVGTLIPMAFLGVGTFGGHAIQPNELIKVGNQVVDVATFQAEVNAER 60 Query: 61 ALLKLQ------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 L Q L+++ ++ L + L + + G+T + + Sbjct: 61 NALIEQGVDASLINEHALQQLILKRLTDKALLENQASYLGMTVSDEMITQILQHYEVFHD 120 Query: 115 LSAEDFSSFLDKQGIGDNHFK------------------------------------QYL 138 F Q Sbjct: 121 NGQFSNDRFAAYLQQNGLTKDVLFAIERLRLSLRQLITGIVGTAIYPNSEVSKLIDLQLE 180 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ----- 193 A + D++ + + +I A + ++ ++ + + N L Sbjct: 181 AREVWVHRYHWQDYVDQVQISDAQIQAYFDEHQDKLIKPATVDLSYIELDPNVLSVGTPT 240 Query: 194 ----------------------------NQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 Q R + + + Sbjct: 241 EQEINAQYANYLRENGITDGRELAQILLTGPDAQNRAAKIQSKLNAGESFEALAKAHSDD 300 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK----SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G S ++ + S + P T G + + + Sbjct: 301 PSGSNGGVIGSFNPSVFGEYAASVEQALSGLSVGQISQPVQTGFGYHIFKVT---KVSND 357 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 A + Q + + L +A I Sbjct: 358 TPNIASMRDQLMDRAAKLKRDQAFADL--SAKI 388 >gi|237508070|ref|ZP_04520785.1| peptidylprolyl isomerase [Burkholderia pseudomallei MSHR346] gi|235000275|gb|EEP49699.1| peptidylprolyl isomerase [Burkholderia pseudomallei MSHR346] Length = 240 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 33/105 (31%), Gaps = 3/105 (2%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN-NTTNPYVTQK 265 ++ +F++ S G ++ + L +N + + P Sbjct: 132 NQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGSN 191 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 G + + DKRD+ + Q ++ +LRS Sbjct: 192 GYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELRS 234 >gi|242309396|ref|ZP_04808551.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239523967|gb|EEQ63833.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 275 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 96/294 (32%), Gaps = 24/294 (8%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 +I ++ ++ + +M + I +NG +T ++ K+Q+ + + IAV LI Sbjct: 2 LIGILLSSFAFGAPSMVNGIAFFVNGNPVTLLEV------YKVQQRDKVNQNIAVDILIN 55 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E L ++EI+K I +N + AR +A S++ G ++K+ + Sbjct: 56 EKLHEEEIKKHKIVATELEINDEINRIARQNQATAAQVESYIRSNGGNWENYKEEIKKGI 115 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + ++ N V + + +Q Sbjct: 116 LKKKLYQVIAQESLKMVDENELLNYYNAHKEEFSIPQSIDVTKFFSKDGKALEALIQSNG 175 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 K+ ++ + + + GK P Sbjct: 176 KEVQKGVQSENEVLQTAALNPQIVAAFTQGKIGTFTP------------------IYPIG 217 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 V I + + ++ + + K + EY +KLRSNA ++ Sbjct: 218 DDFVVFLIKAKNNPAILPFENVRNVVLQKIMGQKEDYLIYEYFEKLRSNAKVNI 271 >gi|153809076|ref|ZP_01961744.1| hypothetical protein BACCAC_03384 [Bacteroides caccae ATCC 43185] gi|149128409|gb|EDM19628.1| hypothetical protein BACCAC_03384 [Bacteroides caccae ATCC 43185] Length = 460 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 101/312 (32%), Gaps = 18/312 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQ 66 + F+ L++ +V+Y + + + E I D+ + AL + Sbjct: 1 MKKFVN-FRFVVTLVLAVFANVVTYAQDNVVDEVVWVVGDEAILKSDVEEARMDALYNGR 59 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSF 123 + +G+ + +E+ V+ L + + I + S E + Sbjct: 60 RFDGDPYCVIPEEIAVQKLFLHQAKLDSIEVSEAEIIQRVDMLTNMYIQQIGSREKMEEY 119 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR-- 181 +K + A + ++ + + E+ + + ++ + Sbjct: 120 FNKTSAQIRETLRDNARDGLTVQKMQQKLVGEIKVTPAEVRRYFKDLPQDSIPYIPTQVE 179 Query: 182 -TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASK-IHDVSIGKAQYLL 238 ++ P + V+KR++D + + ++ + G+ ++ Sbjct: 180 VQIITLQPKIPVAEIEDVKKRLRDYTDRVTKGEIDFSTLARLYSEDKASAIKGGECGFMG 239 Query: 239 ESDLHPQFQNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 + P + N+ Q+ + ++ G I + +KR G+ ++ P Sbjct: 240 RGMMDPSYANVAFSLQDPKKVSKIVESEFGYHIIQLIEKR---GDRVNTRHIL--LRPKV 294 Query: 297 IEKHEAEYVKKL 308 EK E +L Sbjct: 295 SEKELTEACARL 306 >gi|330817346|ref|YP_004361051.1| Putative PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia gladioli BSR3] gi|327369739|gb|AEA61095.1| Putative PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia gladioli BSR3] Length = 325 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 35/300 (11%), Positives = 71/300 (23%), Gaps = 55/300 (18%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQ 88 S + + +N +IT + + E +LI + +Q Sbjct: 67 AAASGAVAPLPANAIARVNDVLITRDQFEQA-RRVANTPDTPEARAALKNQLIAREVLRQ 125 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 K+ D+ V+ A + + + S+ V Sbjct: 126 AAVKAHY--DTQAQVLAVVEQA--------------KTTAMTEFWLHDQVRPASVTDAQV 169 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + G L + A Sbjct: 170 RAKYDEVVGL-------------------------LGDTELKPSAIVLKDRAAADAALAQ 204 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLL----------ESDLHPQFQNLLKKSQNNTT 258 R + + G ++ ++ P + L+ + + Sbjct: 205 LERGADFAQLARQLSQGPGAQQGGALNWVSFRLPIPEGGEQNWPQPLARALVALPRGGMS 264 Query: 259 -NPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 P G + + DKR + +KA L Q +++ E V L A I Sbjct: 265 REPIEAAGGYWILRVDDKRATRIPAFDDVKAALRQQLETAALQRATIEVVVDLLKQARIQ 324 >gi|33519602|ref|NP_878434.1| survival protein SurA precursor [Candidatus Blochmannia floridanus] gi|33517265|emb|CAD83649.1| survival protein SurA precursor [Candidatus Blochmannia floridanus] Length = 426 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 85/286 (29%), Gaps = 16/286 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------- 65 +K FV++ I I Y + RI +N +I D+ +I +LK Sbjct: 1 MKFFRILFVILTLKINTI--YSTLNTIDRIAALVNQNIILKSDVFNKINILKKDILHSDQ 58 Query: 66 -QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 N +L + + +LI+ L Q K+ + D N ++ A ++ F +L Sbjct: 59 FSLENTKLYQKILDQLIINNLIAQIATKNNVQIDHNNIDQVINYVAHCRNMTKNQFLMYL 118 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + Q I ++ N + + + + + + + Sbjct: 119 QHNLGLNFKQYYSEIYQDILNKLICNHIISQRIKISTHEINQTAQKLSFINFHKQFKFIH 178 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA-----QYLLE 239 I + AE+ + N +S ++ + + Sbjct: 179 TIIELPIPAETTQINILNNFAEQLSKKKELHDNIQNIISSYYNNNIFPRITTHIQPWTAW 238 Query: 240 SDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 +L F + P + + + I D R + Sbjct: 239 KNLPVIFDQYLQTAKPGDIIGPIHSFDSIHILKIQDIRTKPTVFPI 284 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/220 (10%), Positives = 59/220 (26%), Gaps = 2/220 (0%) Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 ++ + + Q + Q + + + Sbjct: 204 KKKELHDNIQNIISSYYNNNIFPRITTHIQPWTAWKNLPVIFDQYLQTAKPGDIIGPIHS 263 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + I + TV + + +K +N ++ +K E Sbjct: 264 FDSIHILKIQDIRTKPTVFPIIKVKINGFYSKHKEKNIHIKKQLLKIKEALENHNTTFNT 323 Query: 218 KLEKFASKIHDVSIGK-AQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 ++ + + + +++ + Q+ L +N + P T G I + D Sbjct: 324 IAQEQSKDFYFKNDENSPEWIDLDCIDINLQHTLLTLKKNQISMPEYTSNGWCIIKLIDI 383 Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++ K E++ +L+S + I Sbjct: 384 NKFNYSETIRERAYLHLLNQKFNTTLDEWIHELKSESYIK 423 >gi|285808214|gb|ADC35748.1| hypothetical protein [uncultured bacterium 293] Length = 250 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 18/205 (8%), Positives = 43/205 (20%), Gaps = 11/205 (5%) Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + ++ ++ + E EI + Sbjct: 40 NEWLERRVLVLAARSRGLVKPGAGEAEERVAVEQLLASEMAARVKVSETEIADYARDHTA 99 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 R + +P + + + + G Sbjct: 100 ELGRPEEVTLRQILVPTANEARDVQRR--------LQKDPKSFELLAQSVSRGPEAGKGG 151 Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLS 289 L P+ + T+ VT G + + + + + Sbjct: 152 LMGSFSAGQLPPELEAAAFALKPGETSGIVVTPLGQHVLRLEARTAAHPFSPEETRDRVR 211 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAII 314 A K + E V L + A + Sbjct: 212 ALLREKKSSLAQREIVAGLMARAKV 236 >gi|134295955|ref|YP_001119690.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia vietnamiensis G4] gi|134139112|gb|ABO54855.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia vietnamiensis G4] Length = 646 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 20/273 (7%), Positives = 55/273 (20%), Gaps = 24/273 (8%) Query: 55 DISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 D+ + LL Q + ++ L ++ + + + R Sbjct: 135 DVQRYAQLLSFQGMTPEQYQERVRYSLALQQIPASIVSSAFTPKGPAQRLSELAAQQREV 194 Query: 114 G-------------LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + + + IQ + + Sbjct: 195 QALVLKSSDFAAKVQPTDAQLTAYYDAHKQSFATPETATIQYLVYSPAAAAAAASAQPTD 254 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +I E +R I + AE+ + ++ Sbjct: 255 ADIKKFYDDNPTHFRSEAQVRISHIFIAAASNASAADKAAAKAKAEQLLADVKAHPDQFA 314 Query: 221 KFA-----SKIHDVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 + A G ++ Q + + G + Sbjct: 315 QIAQKSSQDAPSAAKGGDLGFITRGSTAGGKAFDDAAFALKQGEVSGVVESDLGFHILKA 374 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAE 303 + + + +K ++ K + Sbjct: 375 TEVKPSVVKPFADVKDQIAVDLKQQYAAKAFTD 407 Score = 45.8 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 20/211 (9%), Positives = 53/211 (25%), Gaps = 15/211 (7%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------GELE 73 V I ++ + S +NG IT + Q E Sbjct: 26 FVGIQGFRGFFDDSANVAAVNGHKITRVEFDGAFRQQIDQARQALGGQFDIKMFDTPEHR 85 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--QHARNTGLSAEDFSSFLDKQGIGD 131 K + LI + + E ++ +T N V + + Q + Sbjct: 86 KQVLDGLIQQRVLADETQRLHLTASDNAVRDALMSDPMIASLKKPDGTIDVQRYAQLLSF 145 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + + Q++ + ++ ++ ++ D Sbjct: 146 QGMTPEQYQERVRYSLALQQIPASIVSSAFTPKGPAQRLSELAAQQREVQALVLKSSDFA 205 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q + + + ++ Sbjct: 206 AKVQPTDAQLTAYYDAHKQSFATPETATIQY 236 >gi|303253594|ref|ZP_07339732.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307245913|ref|ZP_07527996.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307247999|ref|ZP_07530028.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307254886|ref|ZP_07536708.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257049|ref|ZP_07538824.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259327|ref|ZP_07541054.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|302647514|gb|EFL77732.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306853132|gb|EFM85354.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306855397|gb|EFM87571.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306862127|gb|EFM94099.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306864420|gb|EFM96328.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306866563|gb|EFM98424.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 625 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 27/400 (6%), Positives = 84/400 (21%), Gaps = 89/400 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + F L+ V +NG IT + Sbjct: 1 MIENMHERTKGPV--FKIIFALVSLSFVITGIGTGLVGGDTAAVKVNGTEITQQAFNAAK 58 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + L+ E L +Q ++ + + + Sbjct: 59 NRQQSVLNAQMGERFWDLLDTPEYAKQFNQSVLNGLVDEELLRQYAKELKLGISAEQIKS 118 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE- 160 ++ S + + L G+ + + + ++ + + + E Sbjct: 119 EIVNSPVFQQDGKFSNDLYQQTLRSNGLSADGYAAIVNEGMLFSQIQEGVIGSDFNVPEQ 178 Query: 161 --------------------------------MEIPANKQKMKNITVREYLIRTVLFSIP 188 E+ K+ + + ++ Sbjct: 179 EALLAKLLLQKRQVRLANYSIAKEATNQAASAEELQKYYDAHKSELIEPEKLTVEYVTLT 238 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLP---------------------------KDCNKLEK 221 + N V + + K+ + Sbjct: 239 PTDVANNVQVNDEQVKTYYEKNKADYATKGETRFAHIQLANETDAKAVAEQVKNGADFAE 298 Query: 222 FASKIH-----DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 A G + F+ + I + ++ Sbjct: 299 LAKTKSTDKLSAAQGGDLGWAKAGTFPKAFEAAAASLQDGQVSAVVNVDGAYHIIKVLER 358 Query: 276 R--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + +K ++ + + +++ + A Sbjct: 359 KAETVIPLEQVKDQITKTIRQELLLTEYSNIAREMANRAF 398 >gi|163788662|ref|ZP_02183107.1| putative exported peptidyl-prolyl cis-trans isomerase [Flavobacteriales bacterium ALC-1] gi|159875899|gb|EDP69958.1| putative exported peptidyl-prolyl cis-trans isomerase [Flavobacteriales bacterium ALC-1] Length = 484 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 30/288 (10%), Positives = 79/288 (27%), Gaps = 16/288 (5%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQEIEKSGI 95 + + + ++ + D+ + IA L+ Q + G L+ L + + + Sbjct: 57 KADGVAAVVGDFILLESDLDREIAQLEAQGANLEGVTRCELFGSLLEGKLYAHQAIQDSV 116 Query: 96 TFDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV----VKN 150 + + Q + + D L+ + + + ++ Sbjct: 117 LVNELYIQSQVEQRLQYLLAQTKRDMQYLLNIYNKDSEEALRDEMFEITKNEYLALEMQK 176 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + E+ + + L I Q Q I + + Sbjct: 177 KVTGEIEVTPEEVRQFFNSIPEDEKPIFGTELKLAEIVVIPEVTQAAKQAVIDKLKGFKR 236 Query: 211 RLPKDCNKLEKFA-----SKIHDVSIG--KAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263 + ++ K + G K + + + + P+ T Sbjct: 237 DVEENGASFTTKVLFYTDDKPSKPNGGLYKLNRKQPRMVKEFREVAFSLQEGEISEPFET 296 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + G I + R + L + T I+K + + ++R+ Sbjct: 297 EYGYHIILLEKIRGQQYD-VRHILLRPELTQDAIQKA-KDEIDEVRAK 342 >gi|134282592|ref|ZP_01769296.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia pseudomallei 305] gi|134246149|gb|EBA46239.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia pseudomallei 305] Length = 240 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 3/104 (2%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN-NTTNPYVTQK 265 ++ +F++ S G ++ + L +N + + P Sbjct: 132 NQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGSN 191 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 G + + DKRD+ + Q ++ +LR Sbjct: 192 GYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 233 >gi|68249587|ref|YP_248699.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae 86-028NP] gi|68057786|gb|AAX88039.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae 86-028NP] Length = 622 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 46/395 (11%), Positives = 111/395 (28%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + + + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLTNSKVSKFILGLITVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 AL---LKLQKINGE-------------LEKIAVQELIVETLKKQEIE------------- 91 ++ Q+ L + V +I + L +Q ++ Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 92 ----KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 VK D M K + EI + + V+ ++ Sbjct: 181 VKNSAEVFFQKRLARLATLSLEDEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 185 ------------------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + Q ++ K A E + + + Sbjct: 241 ADNISRNLQVTDVEIAQYYQDNKAQFMTQHLAHIQFANEQDAKVAYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ E++L F++ + P + + +++ Sbjct: 301 AKSLDKISGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA ++ + +E K+ A Sbjct: 360 QSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394 >gi|282880884|ref|ZP_06289577.1| PPIC-type PPIASE domain protein [Prevotella timonensis CRIS 5C-B1] gi|281305266|gb|EFA97333.1| PPIC-type PPIASE domain protein [Prevotella timonensis CRIS 5C-B1] Length = 475 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 29/277 (10%), Positives = 69/277 (24%), Gaps = 35/277 (12%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 +++ ++ S I TING+ I + G ++K +V E + Sbjct: 4 ILLAVMLACCSLVLAQQDDPILMTINGKNIHRSEFEYSYN---KNNAEGVIDKKSVDEYV 60 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + + + + + Sbjct: 61 DLF---------------------INYQLKVIAAEEARLDTLSSFKKEFAMYRDAQIKPT 99 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV-LFSIPDNKLQNQGFVQK 200 I V+ EI N + + + + ++ ++ Sbjct: 100 MITDADVEQKAH--------EIYQQTANRVNASGGLVKVSHILIALKQTAGEVDRRIAEQ 151 Query: 201 RIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT 258 R + + ++ + G+ +L +F + + + + Sbjct: 152 RADSVYRALCKGANFGELAKRVSDDRASASRGGELPWLERGQTLEEFDKAIFSMKKGELS 211 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 P T G I + DKR +LK + Sbjct: 212 KPVQTPAGYHIIFLKDKRSFFPYDSLKTEILQFIEQR 248 >gi|229189238|ref|ZP_04316262.1| Foldase protein prsA 1 [Bacillus cereus ATCC 10876] gi|228594282|gb|EEK52077.1| Foldase protein prsA 1 [Bacillus cereus ATCC 10876] Length = 288 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 90/305 (29%), Gaps = 45/305 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + +++ N + K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYEQMK-------NSQTGKQ 52 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L +QG+ + K Sbjct: 53 TLNNMVMEKVLIKNYKVDDKEVDKKYD--------EMKKQLGDQFDTLLKQQGLKEETVK 104 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + ++ K + + Sbjct: 105 NGVRASLAQEKAIEKTITDKELKENYKPEIKASHILVKD--------------------- 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G Y + +F++ K Sbjct: 144 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGYFTAGKMVKEFEDAAYKLK 200 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 ++ + P +Q G I + D ++ KA + + K++ + + + K Sbjct: 201 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKMQDGQFMNDLMMKEIK 260 Query: 311 NAIIH 315 A + Sbjct: 261 KADVK 265 >gi|167723994|ref|ZP_02407230.1| putative rotamase [Burkholderia pseudomallei DM98] gi|167828511|ref|ZP_02459982.1| putative rotamase [Burkholderia pseudomallei 9] gi|167898574|ref|ZP_02485975.1| putative rotamase [Burkholderia pseudomallei 7894] gi|167906920|ref|ZP_02494125.1| putative rotamase [Burkholderia pseudomallei NCTC 13177] gi|167915279|ref|ZP_02502370.1| putative rotamase [Burkholderia pseudomallei 112] Length = 180 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 3/104 (2%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN-NTTNPYVTQK 265 ++ +F++ S G ++ + L +N + + P Sbjct: 72 NQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGSN 131 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 G + + DKRD+ + Q ++ +LR Sbjct: 132 GYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 173 >gi|120611614|ref|YP_971292.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli AAC00-1] gi|120590078|gb|ABM33518.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli AAC00-1] Length = 265 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 90/305 (29%), Gaps = 49/305 (16%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELE 73 + + + + + A++ I +NG+ + + ++ E+E Sbjct: 5 MKKKLLSGLVAAAVLGTSALPAIAQNI-AVVNGKAVPKERVEVLKQQVERSGRPITPEIE 63 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +E+I + QE +K G+ N + Sbjct: 64 GQIKEEVIAREIFLQEAQKRGLEGSQNVKDQ----------------------------- 94 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + ++ + + + T +EY +L Sbjct: 95 -MELARQTILIRELFADYQKANPVTDADIQAEYDKFVAANTGKEYKASHIL--------- 144 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLK 251 + + K S + K + +K + G + S +F + L+K Sbjct: 145 --VETEDQAKSIIASIKKGAKFEDIAKKQSKDPGSGARGGDLDWATPSSYVSEFTEALVK 202 Query: 252 KSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + T P TQ G I + D R+ + AQ ++ A++ + LR+ Sbjct: 203 LDKGKMTQTPVKTQFGWHVIRLDDVREAKL--PKLDEVKAQIAQQLQQQKLAKFQEDLRA 260 Query: 311 NAIIH 315 A + Sbjct: 261 KAKVE 265 >gi|222824289|ref|YP_002575863.1| hypothetical protein Cla_1294 [Campylobacter lari RM2100] gi|222539510|gb|ACM64611.1| conserved hypothetical protein [Campylobacter lari RM2100] Length = 275 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 35/295 (11%), Positives = 88/295 (29%), Gaps = 28/295 (9%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 + + + + + IT DI + + LK ++ A+ L+ Sbjct: 4 FLISCCFAANVLYAQTLGGVAMIVENQPITLYDIEQTMKELKT-----NDKQKAIAFLVD 58 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + +++ E +K GI + +N Q A++ + ++K G+ FK + Sbjct: 59 DKIQQSEAKKLGIYVSTFELNEKLDQIAKDNKTDINGLQARMEKDGLSFEVFKNKVRKNL 118 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + ++ N++ E + + + ++ N Q Q + Sbjct: 119 EREKLYRSIMQNAKINIDDETLKHFYESNLDKFSTFSNIDLVVYNSTNPELLQQLAQNPM 178 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 + + + L T Sbjct: 179 YKNSQIKSKAISLNAASID---------------------PRLLALLNNTKIGEFTPVLN 217 Query: 263 TQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + +K ++ +K ++ T + E+ ++ K+R+NA I Sbjct: 218 GENAYIVYFVKEKYGKNPIEFDLIKDQITNAYTINQKEQALKNHLDKIRANAHIE 272 >gi|188996490|ref|YP_001930741.1| SurA domain protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931557|gb|ACD66187.1| SurA domain protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 290 Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 101/308 (32%), Gaps = 31/308 (10%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMS----SRIRTTINGEVITDGDISKRIALLKLQKIN 69 +L + +L++ + ++ +NGE + D+ ++ Sbjct: 5 SILNAFLILLVVLSSTFNNKAKAEDGYQLFDKVVLVVNGEPVLKSDLEFAKNWYNIKDD- 63 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSFLDKQG 128 K +++I L Q+ K GI+ V+ + A+ G E F L+ G Sbjct: 64 ----KEVEEKIINSFLLAQQARKMGISVSPQEVDNAVLNIAKANGINDLETFKKKLEDSG 119 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 I + K++LA + ++ K +E + ++TV Sbjct: 120 ISYSKLKEFLARDMLANRLLHLYMREKASKGIIE------------GTKEDVKTVRLIFI 167 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQ 247 + V + + L K++ + G + + DL + Sbjct: 168 SKNRPDYQEVLSK----LDKELNKNNFSEFASKYSDDKFTAENKGLVGEIKKGDLVKELD 223 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + T +G +I I ++ K +S + K++K +KK Sbjct: 224 EAIFSHKAGDIFKVETNEGTYFIYIE---KEENKLIPKTEISEKEV-EKLKKAYDLLLKK 279 Query: 308 LRSNAIIH 315 L+ A+I Sbjct: 280 LKEQAVIQ 287 >gi|167742962|ref|ZP_02415736.1| putative rotamase [Burkholderia pseudomallei 14] Length = 190 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 3/104 (2%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN-NTTNPYVTQK 265 ++ +F++ S G ++ + L +N + + P Sbjct: 82 NQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGSN 141 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 G + + DKRD+ + Q ++ +LR Sbjct: 142 GYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 183 >gi|116873652|ref|YP_850433.1| prsA protein, export protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742530|emb|CAK21654.1| prsA protein, export protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 291 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 89/304 (29%), Gaps = 40/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + ++ + S + + T G+ +T ++ + + + Sbjct: 1 MKKKLILGLVMVMALFSLAACGGGGDVVKTDAGD-VTQDELYEAMK--------DKYGSE 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 VQ+L E + + + S D + + + Sbjct: 52 FVQQLTFEKVLGDKYKVSDEDVD------------KKFKEYKAQYGDQFAAVLAQSGLTE 99 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + +V+ + + + + Sbjct: 100 KTFKSQLKYNLLVQKATEANTDTSDKALKEYYKT---------------WQPDITVSHIL 144 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--K 252 +K+ K+ E+ K + +++++ + G+ + P F+ K Sbjct: 145 VADEKKAKEVEQKLKDGAKFSDLAKEYSTDTATKENGGQLAAFGPGKMDPAFEKAAYALK 204 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKKLRSN 311 ++ + + P TQ G I + + K + A T ++ + +KK + Sbjct: 205 NKGDISAPVKTQYGYHIIQMDEPATKTTFDKDKKAVKASYLTSQLTNENMQKTLKKEFKD 264 Query: 312 AIIH 315 A + Sbjct: 265 ANVK 268 >gi|239994001|ref|ZP_04714525.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Alteromonas macleodii ATCC 27126] Length = 528 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 23/266 (8%), Positives = 65/266 (24%), Gaps = 11/266 (4%) Query: 54 GDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 ++ L++Q +L E++++ + + + Sbjct: 45 FQVADFRDYLRVQMTQNQLAAALTNS---SFALDGEVQQANALQRQTRDAKYVLVSSDEF 101 Query: 114 GLSAE-DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 S E + F ++ + + +D + E + + Sbjct: 102 AGSIEVTDADVEAFYNNNIASFDTDEQVKLAYVKLSVDDLKDRVSVDEEAVRTYYENNLG 161 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSI 231 +E R I + + E + + Sbjct: 162 SYGKEEERRVSHILIEAGDDADAAKAKAESLK--AELDNGADFAALAEADSDDTFSAENG 219 Query: 232 GKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAY 287 G ++ + P F ++ + ++ T+ G I + D ++ + + Sbjct: 220 GDLDFITPEMMDPAFDEAAFALQNVGDVSDVVETEFGFHIIKLTDLKEAQVKSFDEVAGE 279 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + E L A Sbjct: 280 IRDTLLYDAAMEKYFELQNTLAEIAF 305 >gi|124486132|ref|YP_001030748.1| hypothetical protein Mlab_1314 [Methanocorpusculum labreanum Z] gi|124363673|gb|ABN07481.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methanocorpusculum labreanum Z] Length = 93 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 27/82 (32%), Gaps = 1/82 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQN 255 + + K+ + + ++ + G Y + + F++ K Sbjct: 12 KTEAQAKEIMQKISAGDDFAKLAKMYSQCPSGNAGGDLGYFGKGQMVKPFEDACFKAKAG 71 Query: 256 NTTNPYVTQKGVEYIAICDKRD 277 + P TQ G I + D ++ Sbjct: 72 DVVGPVKTQFGWHIIKVTDIKN 93 >gi|196232957|ref|ZP_03131806.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chthoniobacter flavus Ellin428] gi|196222935|gb|EDY17456.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chthoniobacter flavus Ellin428] Length = 136 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 4/111 (3%) Query: 210 LRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGV 267 + ++ + + G + + + P+F N + ++P + G Sbjct: 2 KKGEDFGKLAQEISEDPSAKENKGDLDFFRKEAMVPEFSNAAFGMKKGEISDPVRSDFGF 61 Query: 268 EYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I + D++D K L A K + E +K +R A + Sbjct: 62 HVIKVTDRKDAETVTLEKAKPQLLAFLKNQKKQAAVEEVIKGVREKAEVKI 112 >gi|325518979|gb|EGC98507.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. TJI49] Length = 644 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 22/271 (8%), Positives = 59/271 (21%), Gaps = 22/271 (8%) Query: 55 DISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 D+ + LL Q + ++ L ++ + + + R Sbjct: 135 DVERYAQLLSFQGMTPEQYQERVRYSLALQQIPASIVSSAFTPKSLAQHLSELAAQQREV 194 Query: 114 GLSAEDFSSFLDKQGIGDNH---FKQYLAIQSIWPDVVKNDF--------MLKYGNLEME 162 S + K D + P+ + + + Sbjct: 195 QALVLKTSDYAAKVQPTDAQLAAYYDAHKQSFATPETATIQYLVYSPAAAAASAQPTDAD 254 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + E +R I + AE+ + ++ + Sbjct: 255 VKKFYDDNPTHFRTEAQVRVSHIFIAAASDASAADKAAAKAKAEQLLADVKAHPDQFAQI 314 Query: 223 A-----SKIHDVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274 A G ++ Q + + G + + Sbjct: 315 AQKNSQDAPSAAKGGDLGFITRGSTAGGKAFDDAAFALKQGEVSGVVQSDLGFHILKATE 374 Query: 275 KRD--LGGEIALKAYLSAQNTPTKIEKHEAE 303 + + +K ++A K ++ Sbjct: 375 VKPSAVKPFAEVKDEIAASLKQQYASKAFSD 405 Score = 45.1 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 19/211 (9%), Positives = 52/211 (24%), Gaps = 15/211 (7%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------GELE 73 V I ++ + S +NG IT + Q + Sbjct: 26 FVGIQGFRGFFDDSANVAAVNGHKITRVEFDGAFRQQIDQARQALGGQFDIKAFDTPDHR 85 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQHARNTGLSAEDFSSFLDKQGIGD 131 K + LI + + E ++ +T N V + Q + Sbjct: 86 KQVLDGLIQQRVLADETQRLHLTASDNAVREALLSDPMIASLKKPDGTIDVERYAQLLSF 145 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + + + Q + + ++ ++ ++ D Sbjct: 146 QGMTPEQYQERVRYSLALQQIPASIVSSAFTPKSLAQHLSELAAQQREVQALVLKTSDYA 205 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q + + + ++ Sbjct: 206 AKVQPTDAQLAAYYDAHKQSFATPETATIQY 236 >gi|254194298|ref|ZP_04900730.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia pseudomallei S13] gi|169651049|gb|EDS83742.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia pseudomallei S13] Length = 229 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 3/104 (2%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN-NTTNPYVTQK 265 ++ +F++ S G ++ + L +N + + P Sbjct: 121 NQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGSN 180 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 G + + DKRD+ + Q ++ +LR Sbjct: 181 GYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 222 >gi|307822662|ref|ZP_07652893.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacter tundripaludum SV96] gi|307736266|gb|EFO07112.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacter tundripaludum SV96] Length = 620 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 21/241 (8%), Positives = 68/241 (28%), Gaps = 3/241 (1%) Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 + N + + + +I + + +S + + +V A Sbjct: 144 RIKNALIMEQFQRSIIDSSFATKYDVESFFKIQNQQRDVDYVTVAVQKLAEQPAEEEIAA 203 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + ++ + + ++ D + ++ A ++ K+ + Sbjct: 204 YYQQHQDLYQTPEQVSVEYIELSLEDIAKTIAVTDDKLKAFYEEQKDQYTTPERRKISHI 263 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 N ++ ++ A++ E K+ + G + Sbjct: 264 LFAINDKVDEKTALEKALKAQKELANKDFAAVAAEVSDDKLTAKTGGDLGLFNAGVMEKS 323 Query: 246 FQNLLKK-SQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEA 302 F++ +NP + G I + + ++ ++K ++ + E Sbjct: 324 FEDAASALKLGEVSNPVKSAFGYHLIKVTELVPGEIKPFESVKNEVTKAYQKAQAENAFY 383 Query: 303 E 303 E Sbjct: 384 E 384 Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 26/308 (8%), Positives = 80/308 (25%), Gaps = 15/308 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M +K+ + + F + I +Y + ++ + D++K Sbjct: 1 MLTKIREKAQGAFAWGILIIICVPFALWGIQNYLDTGEEAP-VASVGDKDFFQRDVNKAY 59 Query: 61 ALLKLQKI-----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 L+ A+++LI + + Q + +G+ + F Sbjct: 60 EQYSQNLQGMTIDEQTLKAQALEKLIKDEVLLQYVHANGLVTTDDAAREFIQSLPYFQVD 119 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 D + + +++ + + K Sbjct: 120 GKFDDKRY-KTMLNLQKMSSGEFVNRIKNALIMEQFQRSIIDSSFATKYDVESFFKIQNQ 178 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 + + + + + + + ++ + + + + + +I Sbjct: 179 QRDVDYVTVAVQKLAEQPAEEEIAAYYQQHQDLYQTPEQVSVEYIELSLEDIAKTI---- 234 Query: 236 YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 + + + ++ ++ T P + AI DK D + + Sbjct: 235 ----AVTDDKLKAFYEEQKDQYTTPERRKISHILFAINDKVDEKTALEKALKAQKELANK 290 Query: 296 KIEKHEAE 303 AE Sbjct: 291 DFAAVAAE 298 >gi|257092460|ref|YP_003166101.1| EpsD family peptidyl-prolyl cis-trans isomerase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044984|gb|ACV34172.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 320 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 27/309 (8%), Positives = 76/309 (24%), Gaps = 45/309 (14%) Query: 13 IKLLTTYFVLIIFCIVPIVSYK-SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 + T ++++ + ++++ +NG I+ I+ +A + Sbjct: 8 MPFAATATIVMVLALTACSGKDDKTKSATQVAAKVNGGEISVHQINDVLARAG-NVPADQ 66 Query: 72 LEKI---AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + ++ LI + L QE + + + Sbjct: 67 ARQASGKVLEGLIGQELLLQEAMEKKL------------------------------DRT 96 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + V + E+ + + Sbjct: 97 APVVQAIEAAKREILARAYVDSVTAQAGKPDAAEVHGYYASNPLLFSARRIYNI------ 150 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 ++ +E R + + + G L Sbjct: 151 --NELGVAIAADKMPALQERVDRAKSLNDVAAWLKEQNIPFNAGS-GAKGAEQLPLNLLP 207 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI-ALKAYLSAQNTPTKIEKHEAEYVKK 307 ++ + ++ G + + RD + + + K + +K+ Sbjct: 208 IVAEMRDGQIRLVTMPGGAAVLQLIASRDQPVDEQTARPAIEQFLANKKKSELAETEMKR 267 Query: 308 LRSNAIIHY 316 LR+ A I Y Sbjct: 268 LRAAAKIEY 276 >gi|253567247|ref|ZP_04844697.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_2_5] gi|251944078|gb|EES84597.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_2_5] Length = 517 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 31/297 (10%), Positives = 75/297 (25%), Gaps = 41/297 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + V + C+ + A + ING+ IT + + Sbjct: 1 MKKILVGTLTCLFG--AIAGHAQQDPVLMRINGQDITRSEFER----------------- 41 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + + R L + Q G + Sbjct: 42 ------------------FCHRNKPSGIAGKETLKRCADLFVDMKLKLSAAQKAGLDTVS 83 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + ++ E +MK + + +F Sbjct: 84 DFRTEMENYHRALSRSYLTDSATDEAYAKKLYDQMKTRSAAGEVKVMRIFRYLPQTALPH 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG-KAQYLLESDLHPQFQNLLKKSQ 254 + + + + +K D +L S + Sbjct: 144 HLREAQNLMDSLYHVLEAHPGIDFKTLVNKYSDDKKEFWMGWLQTSQ--EFEEVAFSLKD 201 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRS 310 + P+ T KG++ + + +R++ ++ L + + +K +V KL+S Sbjct: 202 GEYSKPFFTPKGIQIVKVTGRREIPPFEQIRGELIHKLSRRPGTDKEIELWVNKLKS 258 >gi|186474397|ref|YP_001863368.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia phymatum STM815] gi|184198356|gb|ACC76318.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia phymatum STM815] Length = 284 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 79/317 (24%), Gaps = 59/317 (18%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS----RIRTTINGEVITDGDISKRIALLKLQKINGE 71 L + P+ + + A ++ ING I + + + Q + Sbjct: 9 FAAATALYLGLTAPVPAQTASAPAASLPAGTVAIINGVSIPQAQLDAAVQATR-QPDTPQ 67 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L + +LI L +Q EK+G Sbjct: 68 LRQALKAQLITRELFRQNAEKAGY------------------------------GNKPEV 97 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + +K++ + + ++ +Y R + Sbjct: 98 QQVINATKVNAESQLYLKDNIHPDAVTDAQVKSRYDEIVASLGKDDYRPRII-------- 149 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL---------LESDL 242 +++ + G+ ++ S L Sbjct: 150 ---AVADAMTAATVLGGLKAGKSFDVLARQYSITPDKANGGELPWVSFKAPAAEGKTSGL 206 Query: 243 H-PQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTPTKIE 298 P Q L + T P + + + KR +K + Q +E Sbjct: 207 PLPVAQALTQLPVGGVTPEPVIVGNARVIVKLDAKRPTQVPKFDQVKDTIRQQLQALALE 266 Query: 299 KHEAEYVKKLRSNAIIH 315 K A++ L NA I Sbjct: 267 KASAQFTAGLLKNATIQ 283 >gi|332970309|gb|EGK09301.1| peptidyl-prolyl cis-trans isomerase [Kingella kingae ATCC 23330] Length = 610 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 27/258 (10%), Positives = 70/258 (27%), Gaps = 10/258 (3%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 + +A + + L Q + + Q + T + +A++ + Sbjct: 132 EQFMAQERERLTLTVLLNTLNQGTVSDEQAMQFVNARFAERTIRTSVFNPENYAKDVKID 191 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 F D + + D + K + E+ A + + Sbjct: 192 DASLQKFYDANKQTYALQQGVKYDYIVLSP---KDLLDKQTVSDAEVQAALKDAQANAKP 248 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL--PKDCNKLEKFASKI-HDVSIGK 233 I +L P + + K + + K + ++++ S G+ Sbjct: 249 TRKIAHILIEAPKSADEATRSKAKAQAEQVAKEAQAAPEKFADLAKQYSQDAGSAQSGGE 308 Query: 234 AQYL-LESDLHPQFQNLLKKS--QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 + L + + T G + + D + + AL + Sbjct: 309 LGNFAKDGSLPAPALEEAAFKLGEGEVSGVVETDFGYHIVRVTDIQAIDV-AALTERVRR 367 Query: 291 QNTPTKIEKHEAEYVKKL 308 + K ++ + +L Sbjct: 368 ELQEKKAQQAYNKMRDEL 385 Score = 38.1 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 19/199 (9%), Positives = 48/199 (24%), Gaps = 2/199 (1%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 L + I F + ++ + I + + IT + I Q Sbjct: 14 LLLGAIGISFIGFGLANFDISTDKNYIV-RVGDQYITRDALEIAIRN-SEQSGGVADRNQ 71 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 Q L+ ++ ++ GI + V + + + + + Sbjct: 72 VFQILLNRAYLQEGAKRLGIVVSDAQIKQAVVDTPEFHDANGKFDPAKFQAFLQQTHLSE 131 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + + A + R ++ Sbjct: 132 EQFMAQERERLTLTVLLNTLNQGTVSDEQAMQFVNARFAERTIRTSVFNPENYAKDVKID 191 Query: 196 GFVQKRIKDAEESRLRLPK 214 ++ DA + L + Sbjct: 192 DASLQKFYDANKQTYALQQ 210 >gi|307261487|ref|ZP_07543156.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868770|gb|EFN00578.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 625 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 28/400 (7%), Positives = 85/400 (21%), Gaps = 89/400 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + F L+ V +NG IT + Sbjct: 1 MIENMHERTKGPV--FKIIFALVSLSFVITGIGTGLVGGDTAAVKVNGTEITQQAFNAAK 58 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + L+ E L +Q ++ + + + Sbjct: 59 NRQQSVLNAQMGERFWDLLDTPEYAKQFNQSVLNGLVDEELLRQYAKELKLGISAEQIKS 118 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE- 160 V ++ S + + L G+ + + + ++ + + + E Sbjct: 119 EIVNSSVFQQDGKFSNDLYQQTLRSNGLSADGYAAIVNEGMLFSQIQEGVIGSDFNVPEQ 178 Query: 161 --------------------------------MEIPANKQKMKNITVREYLIRTVLFSIP 188 E+ K+ + + ++ Sbjct: 179 EALLAKLLLQKRQVRLANYSIAKEATNQAASAEELQKYYDAHKSELIEPEKLTVEYVTLT 238 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLP---------------------------KDCNKLEK 221 + N V + + K+ + Sbjct: 239 PTDVANNVQVNDEQVKTYYEKNKADYATKGETRFAHIQLANETDAKAVAEQVKNGADFAE 298 Query: 222 FASKIH-----DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 A G + F+ + I + ++ Sbjct: 299 LAKTKSTDKLSAAQGGDLGWAKAGTFPKAFEAAAASLQDGQVSAVVNVDGAYHIIKVLER 358 Query: 276 R--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + +K ++ + + +++ + A Sbjct: 359 KAETVIPLEQVKDQITKTIRQELLLTEYSNIAREMANRAF 398 >gi|31789450|gb|AAP58564.1| conserved hypothetical protein [uncultured Acidobacteria bacterium] Length = 434 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 21/292 (7%), Positives = 71/292 (24%), Gaps = 61/292 (20%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 IT+ ++ + Q + I + K+ Q Sbjct: 120 ITEQEVDEFFKQPANQAK--------FDQFIND-----AKAKNPQLASGQVPEEQLKQVK 166 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ---SIWPDVVKNDFMLKYGNLEMEIPANK 167 R G S + + + ++ + + K + EI A Sbjct: 167 RQLGQVLIGESKGIAAGSDKKRSVELQIKLEQARILAQTYAQEQLAEKMKATDAEIDAY- 225 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI- 226 I + + + + ++ + ++F++ Sbjct: 226 -------------------IAQHPDLDAKQNRGKAEEVLKRVKAGEDFAKLAKEFSTDPG 266 Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 G + + + P+F+ ++ + G I + +++ + + Sbjct: 267 SKEKGGDLGWFAQGAMVPEFEQAAFALKPGEVSDLVESSFGYHIIKVEERKTETKDGKPQ 326 Query: 286 AYL-----------------------SAQNTPTKIEKHEAEYVKKLRSNAII 314 + + E+ + + + ++ + + Sbjct: 327 EQVHARHILIGDSAKSDNPFAPPMKGRDKARAAVEEEKQKKVLDEIVKRSHV 378 >gi|325268744|ref|ZP_08135372.1| hypothetical protein HMPREF9141_0581 [Prevotella multiformis DSM 16608] gi|324988912|gb|EGC20867.1| hypothetical protein HMPREF9141_0581 [Prevotella multiformis DSM 16608] Length = 474 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 25/276 (9%), Positives = 77/276 (27%), Gaps = 36/276 (13%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 + TING+ ++ + + + ++ I E + K + Sbjct: 19 GQADPTLMTINGQPVSRSEFE-------YSYNKNNSDGVIDKKSIDEYVPLFIDYKLKVQ 71 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 + + Q I P ++ Sbjct: 72 AALDARLDTLSSFKK----------------------EFLGYRDQQIRPAFIR---DADV 106 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE-SRLRLPKD 215 +I + ++ + +L + + + +++ D+ + + Sbjct: 107 EAEARKIYRDTRRQIEANGGLWHCAHILVGMRQRASKEEENAARQLADSLYTALQKGADF 166 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC 273 +K+++ + G L + +F+ + T+ P ++ G I + Sbjct: 167 TELAKKYSTDTRSAKNGGDLPGLQKGQTVAEFEKAMLALKPGETSRPVLSPFGYHIIKMI 226 Query: 274 DKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKL 308 +L +L+A + ++ ++ + L Sbjct: 227 GHEELPPYDSLRADIMQYIEMRGLRDQIISQRLDSL 262 >gi|145628054|ref|ZP_01783855.1| lipoprotein signal peptidase [Haemophilus influenzae 22.1-21] gi|144979829|gb|EDJ89488.1| lipoprotein signal peptidase [Haemophilus influenzae 22.1-21] Length = 622 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 47/395 (11%), Positives = 110/395 (27%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + I + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLTNSKISKFILGLIAVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 AL---LKLQKINGE-------------LEKIAVQELIV-----------------ETLKK 87 ++ Q+ L + V +I E +K+ Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 VK D M K + EI + + V+ ++ Sbjct: 181 VKNSAEIFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 185 ------------------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + Q ++ K A E + + + Sbjct: 241 ADNISRNLQVTDVEIAQYYQDNKAQFMTQHLAHIQFANEQDAKVAYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ E++L F++ + P + + +++ Sbjct: 301 AKSLDKISGENGGNLGWVNENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA ++ + +E K+ A Sbjct: 360 QSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394 >gi|78189176|ref|YP_379514.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Chlorobium chlorochromatii CaD3] gi|78171375|gb|ABB28471.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Chlorobium chlorochromatii CaD3] Length = 697 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 27/272 (9%), Positives = 68/272 (25%), Gaps = 16/272 (5%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 ITD DI K K Q + + ET+ + + + Sbjct: 218 PITDDDIKKYYDEHKEQFRQEKPSRKV------ETVFFPLVPSAKDSAAVRQELEALRAD 271 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------NDFMLKYGNLEMEI 163 + + D+ + + + + + + Sbjct: 272 FSKSQNDVDFVKVQSDRSNSANVVLTRADFSPLAGNAIFNTSSLAAGSLIGPFADNGEFR 331 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 +++ +L VQ+ + ++++ Sbjct: 332 LLKVVRVQPAVQPIARASHILLRFNPANKAEIEKVQQLTMQIGQQLQAGVPFETLAKQYS 391 Query: 224 SKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAIC--DKRDLG 279 + + G + + P+F + + P TQ GV I + D+R L Sbjct: 392 ADPGSAENGGDLGWFSPDRMVPEFSKAVFNSRPGAIIGPIQTQFGVHIIKVTGFDQRALV 451 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ S+ + + + + Sbjct: 452 ASEVVRTIRSSSESMESQRRRAMAFQVDAKEK 483 Score = 41.6 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 2/68 (2%) Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEA 302 + + + P T G + + K G +K ++ Q K ++ Sbjct: 624 LVEAISGMTAGKLFKPVKTSNGYALVRLERKSIPEGFDPNAVKGMVAPQLLQAKHQQLFT 683 Query: 303 EYVKKLRS 310 EY + LR+ Sbjct: 684 EYFQSLRN 691 Score = 41.2 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 11/135 (8%), Positives = 38/135 (28%), Gaps = 6/135 (4%) Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 V+ +I + + ++ + +++ + + + + Sbjct: 455 VVRTIRSSSESMESQRRRAMAFQVDAKEKGFAKSAATAGVKVEESNEFTRRMAIRPLGYN 514 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL---GGEIALKAYLSAQNTPTKIEK 299 + + ++ ++KG + K D + K + + K Sbjct: 515 DKVATFAFSAKEGDISDVIESKKGFYVARLTAKHDEGYRSLDKDAKERIKQELLVEKKGA 574 Query: 300 HEAEYVKKLRSNAII 314 +KL + A + Sbjct: 575 ALQ---QKLTAAAKV 586 >gi|73542615|ref|YP_297135.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha JMP134] gi|72120028|gb|AAZ62291.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha JMP134] Length = 272 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 35/315 (11%), Positives = 76/315 (24%), Gaps = 58/315 (18%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 ++ + ++ I + + S A ++NG I D ++ + +L + Sbjct: 1 MQTNISRLIVTIALAFGLQAGLSVAH----AASVNGVAIPDSQVTATLQQSRL-ADTPQA 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 Q+LI L +QE K V Sbjct: 56 RSAITQQLIARELFRQEAAKDKSLESRPDVQQAIR------------------------- 90 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + +K+ + + + +EY R + Sbjct: 91 ----DARTAILTQAWLKDRIKPAPVSDADVKARYDAIVATLGDKEYKARLIQVGDEAGAK 146 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL---------LESDLH 243 ++ E + S G+ ++ +L Sbjct: 147 AALARIK-----------SGEDFAKVAEAVSLAPSKASGGQMDWISFKVPVQEGKTQNLP 195 Query: 244 -PQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEK 299 P Q L T P + + + R + K + +E+ Sbjct: 196 LPIAQALAVLPAGAVTATPIAWNNHYYLMKLDEVRPTQVPTFEQTKPGIQQALQAQALER 255 Query: 300 HEAEYVKKLRSNAII 314 V +L + A + Sbjct: 256 ATTALVTQLLAKAKV 270 >gi|167820136|ref|ZP_02451816.1| rotamase [Burkholderia pseudomallei 91] Length = 180 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 3/104 (2%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN-NTTNPYVTQK 265 ++ +F++ S G ++ + L +N + + P Sbjct: 72 NQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGSN 131 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 G + + DKRD+ + Q ++ +LR Sbjct: 132 GYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 173 >gi|29349254|ref|NP_812757.1| peptidyl-prolyl cis-trans isomerase [Bacteroides thetaiotaomicron VPI-5482] gi|253570400|ref|ZP_04847809.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 1_1_6] gi|29341162|gb|AAO78951.1| peptidyl-prolyl cis-trans isomerase [Bacteroides thetaiotaomicron VPI-5482] gi|251840781|gb|EES68863.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 1_1_6] Length = 514 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 27/291 (9%), Positives = 75/291 (25%), Gaps = 37/291 (12%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 ++ + + ++A + ING+ I + K + I Sbjct: 6 LLLGWISLFGVLAFAQEDPVVMRINGKDIPRSEFEYSYRRHADGNGMKLSPKEYAEFFIQ 65 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 LK + +G+ S D I K+ + Sbjct: 66 SKLKVEAARAAGLDTTSAFRKQQEAYRTNLLRSYLLDDQEMDGNARILYQKMKENVRGGQ 125 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + ++ + Y + + +L ++ KR Sbjct: 126 VQIQQIYKYLPQTITSRHLQEEQARMDS------IYQVIQNQPGVDFARLVDRFSDDKRC 179 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 + E + + ++ + P+ Sbjct: 180 RWIESLQTTSEFEEAAFS-------------------------------LAKGEISKPFF 208 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 T +G+ + + D++++ + L + ++K V++L+ Sbjct: 209 TPEGIHILKVIDRKEVPAYEVVSDSLLNRLRRQPLDKGTEAIVEQLKKEYQ 259 >gi|255690563|ref|ZP_05414238.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides finegoldii DSM 17565] gi|260624024|gb|EEX46895.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides finegoldii DSM 17565] Length = 460 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 31/280 (11%), Positives = 84/280 (30%), Gaps = 13/280 (4%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQ 66 + F+ L++ + +Y + + + E I D+ + AL + Sbjct: 1 MKKFVN-FRFVVTLVLAVFANVATYAQDNVVDEVVWVVGDEAILKSDVEEARMDALYNGR 59 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSF 123 + G+ + +E+ V+ L + + I + S E + Sbjct: 60 RFEGDPYCVIPEEIAVQKLFLHQAKLDSIEVSEAEIIQRVDMMTNMYIQQIGSKEKMEEY 119 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 +K + A + ++ + + E+ + + ++ + Sbjct: 120 FNKTSTQIRETLRDNARDGLTVQKMQQKLVGEIKVTPAEVRRYFKDLPQDSIPYIPTQVE 179 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLL 238 + I ++ K + R+ K A K + G+ ++ Sbjct: 180 VQIITLQPKIPISEIEDVKKKLRDYTDRVTKGEIDFSTLARLYSEDKASAIKGGECGFMG 239 Query: 239 ESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKR 276 + P + N+ + + ++ G I + +KR Sbjct: 240 RGMMDPAYANVAFSLQDPKKVSKIVESEFGYHIIQLIEKR 279 >gi|167923109|ref|ZP_02510200.1| putative rotamase [Burkholderia pseudomallei BCC215] Length = 190 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 3/104 (2%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN-NTTNPYVTQK 265 ++ +F++ S G ++ + L +N + + P Sbjct: 82 NQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGSN 141 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 G + + DKRD+ + Q ++ +LR Sbjct: 142 GYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 183 >gi|212212179|ref|YP_002303115.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuG_Q212] gi|212010589|gb|ACJ17970.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuG_Q212] Length = 522 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 34/320 (10%), Positives = 82/320 (25%), Gaps = 41/320 (12%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSY-KSWAMSSRIRTTINGEVITDGDISKR 59 M + + +I L V + F + + Y +S ++ +NGE I++ +++ Sbjct: 1 MLQNIHERVKGWIAGLILAVVSLSFVLWGVQYYLQSEGGKNKTVAKVNGEKISENELNVV 60 Query: 60 IALLK-----------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 L+ + L++ A+Q LI+ + EK G +N Sbjct: 61 FQRLQRAYSLQRGQTLVSAKAEALKEEALQNLIMNHVLLDSAEKMGFNISPAEINQIITV 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 F Q++A + + +P + Sbjct: 121 LPAFQENGKFSPQRFQQFLYENSLTSAQFVAQ--LLQVFLIQQVEKGITGSAFVLPNEIK 178 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + R ++ S +++ + ++ R + Sbjct: 179 NNYELINQARDFRYMIISRAPFLKESKVTPEMIADYYQKHRESFKAPEKLSIAYLLLS-- 236 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + + S + R+ +K + Sbjct: 237 --------------PEMIRQQVSVSDHEIKQ-----------YYESNREGKSFNQVKDQI 271 Query: 289 SAQNTPTKIEKHEAEYVKKL 308 KI + +L Sbjct: 272 KQSLLQQKINTLLTKKSDQL 291 >gi|171322244|ref|ZP_02911086.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria MEX-5] gi|171092428|gb|EDT37778.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria MEX-5] Length = 644 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 22/273 (8%), Positives = 59/273 (21%), Gaps = 22/273 (8%) Query: 53 DGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 D+ + LL Q + ++ L ++ + + + R Sbjct: 133 SIDVERYAQLLSFQGMTPEQYQERVRYSLALQQIPASIVASAFTPKGPAQRLSELAAQQR 192 Query: 112 NTGLSAEDFSSFLDKQGIGDNH---FKQYLAIQSIWPDVVKNDF--------MLKYGNLE 160 S + K D + P+ + + Sbjct: 193 EVQALVLTTSDYAAKVQPTDAQLTAYYDAHKQSFATPETATIQYLVYSPAAAGASAQPTD 252 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +I E +R I + AE+ + ++ Sbjct: 253 ADIKKFYDDNPTHFRSEAQVRVSHIFIAAASDASAADKAAAKAKAEQLLADVKAHPDQFA 312 Query: 221 KFA-----SKIHDVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 + A G ++ Q + + + G + Sbjct: 313 QIAQKNSQDAPSAAKGGDLGFITRGSTAGGKAFDDAAFALKQGDVSGVVQSDLGFHILKA 372 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAE 303 + + + +K ++ Q ++ Sbjct: 373 TEVKPSLVKPFADVKDQIAVQLKQQYAATAFSD 405 Score = 44.7 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 21/220 (9%), Positives = 54/220 (24%), Gaps = 15/220 (6%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------GELE 73 V I ++ + S ING IT + Q E Sbjct: 26 FVGIQGFRGFFDDSANVAAINGHKITRVEFDGAFRQQIDQARQALGGQFDIKAFDTPEHR 85 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--QHARNTGLSAEDFSSFLDKQGIGD 131 K + LI + + E ++ +T N V + + Q + Sbjct: 86 KQVLDGLIQQRVLADETQRLHLTASDNAVRDALMNDPMIASLKKPDGSIDVERYAQLLSF 145 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + Q++ + ++ ++ ++ + D Sbjct: 146 QGMTPEQYQERVRYSLALQQIPASIVASAFTPKGPAQRLSELAAQQREVQALVLTTSDYA 205 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 + Q + + + ++ + Sbjct: 206 AKVQPTDAQLTAYYDAHKQSFATPETATIQYLVYSPAAAG 245 >gi|76819072|ref|YP_335569.1| putative rotamase [Burkholderia pseudomallei 1710b] gi|254186693|ref|ZP_04893209.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei Pasteur 52237] gi|76583545|gb|ABA53019.1| putative rotamase [Burkholderia pseudomallei 1710b] gi|157934377|gb|EDO90047.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei Pasteur 52237] Length = 244 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 3/104 (2%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN-NTTNPYVTQK 265 ++ +F++ S G ++ + L +N + + P Sbjct: 136 NQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGSN 195 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 G + + DKRD+ + Q ++ +LR Sbjct: 196 GYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 237 >gi|60683327|ref|YP_213471.1| putative exported isomerase [Bacteroides fragilis NCTC 9343] gi|60494761|emb|CAH09567.1| putative exported isomerase [Bacteroides fragilis NCTC 9343] Length = 517 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 33/297 (11%), Positives = 76/297 (25%), Gaps = 41/297 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + V + C+ + A + ING+ IT + + Sbjct: 1 MKKILVGTLTCLFG--AIAGHAQQDPVLMRINGQDITRSEFER----------------- 41 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + + R L + Q G + Sbjct: 42 ------------------FCHRNKPSGIAGKETLKRCADLFVDMKLKLSAAQKAGLDTVS 83 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + ++ E +MK + + +F Sbjct: 84 DFRTEMENYHRALSRSYLTDSATDEAYAKKLYDQMKTRSAAGEVKVMRIFRYLPQTALPH 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG-KAQYLLESDLHPQFQNLLKKSQ 254 + +I + + +K D +L S + Sbjct: 144 HLREAQILMDSLYHVLETHPDIDFKTLVNKYSDDKKEFWMGWLQTSQ--EFEEVAFSLKD 201 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRS 310 + P+ T KG++ I + +R++ ++ L + + +K +V KL+S Sbjct: 202 GEYSKPFFTPKGIQIIKVTGRREIPPFEQIRGELIHKLSRRPGTDKEIELWVNKLKS 258 >gi|160882392|ref|ZP_02063395.1| hypothetical protein BACOVA_00341 [Bacteroides ovatus ATCC 8483] gi|237719065|ref|ZP_04549546.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_2_4] gi|260172001|ref|ZP_05758413.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D2] gi|293369504|ref|ZP_06616083.1| PPIC-type PPIASE domain protein [Bacteroides ovatus SD CMC 3f] gi|299148148|ref|ZP_07041210.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp. 3_1_23] gi|315920314|ref|ZP_07916554.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156112205|gb|EDO13950.1| hypothetical protein BACOVA_00341 [Bacteroides ovatus ATCC 8483] gi|229451444|gb|EEO57235.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_2_4] gi|292635389|gb|EFF53902.1| PPIC-type PPIASE domain protein [Bacteroides ovatus SD CMC 3f] gi|298512909|gb|EFI36796.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp. 3_1_23] gi|313694189|gb|EFS31024.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 460 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 91/312 (29%), Gaps = 18/312 (5%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQ 66 + F+ L++ + +Y + + + E I D+ + AL + Sbjct: 1 MKKFVN-FRFVVTLVLAIFANVATYAQDNVVDEVVWVVGDEAILKSDVEEARMDALYNGR 59 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 + G+ + +E+ V+ L + + I + + Sbjct: 60 RFEGDPYCVIPEEIAVQKLFLHQAKLDSIEVSEAEIIQRVDMMTNMYIQQIGSREKMEEY 119 Query: 127 QGIGDNHFKQYLAIQS---IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 ++ L + + ++ E+ + + ++ + Sbjct: 120 FNKTSTQIRETLRDNARDGLTVQKMQQKLAGDIKVTPAEVRRYFKDLPQDSIPYIPTQVE 179 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLL 238 + I ++ + + R+ K A K + G+ ++ Sbjct: 180 VQIITLQPKIPVSEIEDVKRTLRDYTDRVTKGEIDFSTLARLYSEDKASAIKGGECGFMG 239 Query: 239 ESDLHPQFQNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 + P + N+ Q+ + ++ G I + +KR G+ ++ P Sbjct: 240 RGMMDPAYANVAFSLQDPKKVSKIVESEFGFHIIQLIEKR---GDRVNTRHIL--LRPKV 294 Query: 297 IEKHEAEYVKKL 308 EK E +L Sbjct: 295 SEKELTEACARL 306 >gi|254521282|ref|ZP_05133337.1| peptidylprolyl isomerase [Stenotrophomonas sp. SKA14] gi|219718873|gb|EED37398.1| peptidylprolyl isomerase [Stenotrophomonas sp. SKA14] Length = 651 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 18/194 (9%), Positives = 43/194 (22%), Gaps = 4/194 (2%) Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 D + D Q Q+ + + + + + Sbjct: 222 PADTAPVTDAQIKQWYDSHGKDFRQAESVSLEYVEINGGTLPAPAAADEATLRKRYEDEK 281 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQ 235 + G K K A E++ + + G Sbjct: 282 AKFTSPEQRQAAHILITGDGAEAKANKIAAEAKAAGADFAALAKANSEDPGSKAQGGDLG 341 Query: 236 YLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 ++ + F++ + P T G I + R G+ + Sbjct: 342 WVERGAMVKPFEDALFAAKAGDVIGPVKTDFGYHIIKVAAVRGGQGKS--FEEVRDTLAA 399 Query: 295 TKIEKHEAEYVKKL 308 +++ +L Sbjct: 400 EQLKADGERGFNEL 413 Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 30/303 (9%), Positives = 79/303 (26%), Gaps = 40/303 (13%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-------------- 46 M K+ S +I + ++I F V SY + + Sbjct: 1 MLQKLRDKTSGWIVTVILGLLMIPFLFVIDNSYLGGVGAQN-VAKVSAPPTWWRSAPSWW 59 Query: 47 ------NGEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++++ + E + +LI E + + Sbjct: 60 PVRMLWQHHEISAQDFRTRFEQERMRERQQQGENFDPRAFESTENKLAVLDQLIDEQVVR 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E++G+ V + + F + + + ++ Sbjct: 120 LVGEQAGVVIGDGAVREYIATIPAF----LDSNGKFNENNYRLALAGGNPPRTPTQFQEL 175 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 V+ ++ + + + + L T + ++ Sbjct: 176 VRESLQQSVIPSGLQNSGFVTQSETERLLKLLGETRDVELAALPEVPADTAPVTDAQIKQ 235 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 KD + E + + +++ G + + + + T+P Q Sbjct: 236 WYDSHGKDFRQAESVSLEYVEINGGTLP-APAAADEATLRKRYEDEKAKFTSPEQRQAA- 293 Query: 268 EYI 270 + Sbjct: 294 HIL 296 >gi|53715358|ref|YP_101350.1| peptidyl-prolyl cis-trans isomerase [Bacteroides fragilis YCH46] gi|52218223|dbj|BAD50816.1| peptidyl-prolyl cis-trans isomerase [Bacteroides fragilis YCH46] Length = 517 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 30/297 (10%), Positives = 74/297 (24%), Gaps = 41/297 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + V + C+ + A + ING+ IT + + Sbjct: 1 MKKILVGTLTCLFG--AIAGHAQQDPVLMRINGQDITRSEFER----------------- 41 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + + R L + Q + Sbjct: 42 ------------------FCHRNKPSGIAGKETLKRCADLFVDMKLKLSAAQKARLDTVS 83 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + ++ E +MK + + +F Sbjct: 84 DFRTEMENYHRALSRSYLTDSATDEAYAKKLYDQMKTRSAAGEVKVMRIFRYLPQTALPH 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG-KAQYLLESDLHPQFQNLLKKSQ 254 + + + + +K D +L S + Sbjct: 144 HLREAQNLMDSLYHVLEAHPDIDFKTLVNKYSDDKKEFWMGWLQTSQ--EFEEVAFSLKD 201 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRS 310 + P+ T KG++ + + +R++ ++ L + + +K +V KL+S Sbjct: 202 GEYSKPFFTPKGIQIVKVTGRREIPPFEQIRGELIHKLSRRPGTDKEIELWVNKLKS 258 >gi|32033981|ref|ZP_00134237.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208477|ref|YP_001053702.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae L20] gi|126097269|gb|ABN74097.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 625 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 28/400 (7%), Positives = 85/400 (21%), Gaps = 89/400 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + F L+ V +NG IT + Sbjct: 1 MIENMHERTKGPV--FKIIFALVSLSFVITGIGTGLVGGDTAAVKVNGTEITQQAFNAAK 58 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + L+ E L +Q ++ + + + Sbjct: 59 NRQQSVLNAQMGERFWDLLDTPEYAKQFNQSVLNGLVDEELLRQYAKELKLGISAEQIKS 118 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE- 160 V ++ S + + L G+ + + + ++ + + + E Sbjct: 119 EIVNSSIFQQDGKFSNDLYQQTLRSNGLSADGYAAIVNEGMLFSQIQEGVIGSDFNVPEQ 178 Query: 161 --------------------------------MEIPANKQKMKNITVREYLIRTVLFSIP 188 E+ K+ + + ++ Sbjct: 179 EALLAKLLLQKRQVRLANYSIAKEATNQAASAEELQKYYDAHKSELIEPEKLTVEYVTLT 238 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLP---------------------------KDCNKLEK 221 + N V + + K+ + Sbjct: 239 PTDVANNVQVNDEQVKTYYEKNKADYATKGETRFAHIQLANETDAKAVAEQVKNGADFAE 298 Query: 222 FASKIH-----DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 A G + F+ + I + ++ Sbjct: 299 LAKTKSTDKLSAAQGGDLGWAKAGTFPKAFEAAAASLQDGQVSAVVNVDGAYHIIKVLER 358 Query: 276 R--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + +K ++ + + +++ + A Sbjct: 359 KAETVIPLEQVKDQITKTIRQELLLTEYSNIAREMANRAF 398 >gi|297539447|ref|YP_003675216.1| EpsD family peptidyl-prolyl cis-trans isomerase [Methylotenera sp. 301] gi|297258794|gb|ADI30639.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Methylotenera sp. 301] Length = 316 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 80/306 (26%), Gaps = 42/306 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKINGE 71 K+L V+I + +S+I +NG IT I + + + E Sbjct: 3 KILKLSLVVIFCNLAACGKGSEKVANSQIAAKVNGVEITTHQIDSVMKSAQNVTAENVSE 62 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 K A+ +LI + L + K + + + Sbjct: 63 FRKKALDKLIDQQLVLDKASKESLDRTPDVILEI-------------------------- 96 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + +K + E + + + + + Sbjct: 97 ----EAAKKEILARAYLKKMLANSSEINDSEFRKYYDEHTELFSKRRIYNL-QDISTQSN 151 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 Q +++ + + K KF+S L ++ Sbjct: 152 EQTLELLKENVNAQKSMMDIAESLKAKGIKFSSGSF--------TRPAEQLPLDILPKMQ 203 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 ++ + + I + + + T+ ++ + +KK R Sbjct: 204 MLKDGDMFVWQSGDIAHAIKLTSIEESPVGLTEATPMIKNYFINTRGKQIVEDKIKKFRQ 263 Query: 311 NAIIHY 316 A I Y Sbjct: 264 EAKIEY 269 >gi|172060885|ref|YP_001808537.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria MC40-6] gi|171993402|gb|ACB64321.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria MC40-6] Length = 644 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 23/273 (8%), Positives = 59/273 (21%), Gaps = 22/273 (8%) Query: 53 DGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 D+ + LL Q + ++ L ++ + + + R Sbjct: 133 SIDVERYAQLLSFQGMTPEQYQERVRYSLALQQIPASIVASAFTPKGPAQRLSELAAQQR 192 Query: 112 NTGLSAEDFSSFLDKQGIGDNH---FKQYLAIQSIWPDVVKNDF--------MLKYGNLE 160 S + K D + P+ + + Sbjct: 193 EVQALVLKTSDYAAKVQPTDAQLTAYYDAHKQSFATPETATIQYLVYSPAAAAASAQPTD 252 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +I E +R I + AE+ + ++ Sbjct: 253 ADIKKFYDDNPTHFRSEAQVRVSHIFIAAASDASAADKAAAKTKAEQLLADVKAHPDQFA 312 Query: 221 KFA-----SKIHDVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 + A G ++ Q + + + G + Sbjct: 313 QIAQKNSQDAPSAAKGGDLGFITRGSTAGGKAFDDAAFALKQGDVSGVVQSDLGFHILKA 372 Query: 273 CDKRD--LGGEIALKAYLSAQNTPTKIEKHEAE 303 + + + +K ++ Q K + Sbjct: 373 TEVKPSVVKPFADVKDQIAVQLKQQYAAKAFTD 405 Score = 45.4 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 20/211 (9%), Positives = 52/211 (24%), Gaps = 15/211 (7%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------GELE 73 V I ++ + S +NG IT + Q E Sbjct: 26 FVGIQGFRGFFDDSANVAAVNGHKITRVEFDGAFRQQIDQARQALGGQFDIKAFDTPEHR 85 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--QHARNTGLSAEDFSSFLDKQGIGD 131 K + LI + + E ++ +T N V + + Q + Sbjct: 86 KQVLDGLIQQRVLADETQRLHLTASDNAVRDALMSDPMIASLKKPDGSIDVERYAQLLSF 145 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + Q++ + ++ ++ ++ D Sbjct: 146 QGMTPEQYQERVRYSLALQQIPASIVASAFTPKGPAQRLSELAAQQREVQALVLKTSDYA 205 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q + + + ++ Sbjct: 206 AKVQPTDAQLTAYYDAHKQSFATPETATIQY 236 >gi|311070719|ref|YP_003975642.1| hypothetical protein BATR1942_18970 [Bacillus atrophaeus 1942] gi|310871236|gb|ADP34711.1| hypothetical protein BATR1942_18970 [Bacillus atrophaeus 1942] Length = 306 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 103/329 (31%), Gaps = 41/329 (12%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSY------KSWAMSSRIRTTINGEVITDG 54 M K L+ + + T V ++ +V+Y + S TI + +T Sbjct: 1 MIEKKGLKLNLKSRTIWTIIVGVLLVSCIVVAYKLTKSQAAATQSQESIATIGDKSVTRE 60 Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 D K++ E K ++++I + +Q +K+ + + + F+ Sbjct: 61 DWLKKM--------EDEYGKATLEDMINVRVVEQLAKKNKLKVSDSDIEREFLLIKAVNN 112 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 ED + ++ Q + +++ E E+ + K K + Sbjct: 113 SFYEDE-----------HTTEKEWKDQIRYNILLEELLTKDIDISEKEMKSFYTKNKELY 161 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 + R + D + N+ + + + E+ + G Sbjct: 162 QFDDSYRIRHIVVKDQEEANRVLK--------DLKGGSSFEAVAAERSTDRYTSPYGGDL 213 Query: 235 QYLLESDLH----PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYL 288 ++ E+ + K +T P KG I + +K + +K + Sbjct: 214 GFVTEAQDSIPAAYITEARTLKENEWSTEPIKVSKGYAIIQLKEKLNARTFTYDEVKDQI 273 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 Q ++ VK L A + ++ Sbjct: 274 KRQIAMDQLGDKAT--VKTLWKEADVSWF 300 >gi|325845187|ref|ZP_08168495.1| putative foldase protein PrsA [Turicibacter sp. HGF1] gi|325488783|gb|EGC91184.1| putative foldase protein PrsA [Turicibacter sp. HGF1] Length = 549 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 26/251 (10%), Positives = 70/251 (27%), Gaps = 9/251 (3%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 ++ V++L E + + D++ + + + ++F Sbjct: 241 KTNEKEYTVEDLYNELVPAYGLSTGISILDTHLLEDKYSYDEKEVKALIDEFKVNWGSNY 300 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + I+ + + A Y S Sbjct: 301 YAYMAQYGLMNDEEIFN------YFKLAALQDAAFAAEYPITDEQLQAAYNEYKPNISAR 354 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 ++++ + I + + + K ++++ + G + + +F+N Sbjct: 355 HILVEDEETAKDLIAQLDAAEDKEAKFEELAKEYSKDGSASNGGDLGSFGKGQMVSEFEN 414 Query: 249 LLKK-SQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK-HEAEYV 305 + T P TQ G I + + LK L + + + Sbjct: 415 AAFALNVGEYTEEPVKTQYGYHVIYKYAEDEKPSFDDLKDELETTIRSEEYTQLKLEAIL 474 Query: 306 KKLRSNAIIHY 316 K R+ A + + Sbjct: 475 IKYRTEANVKF 485 >gi|296271661|ref|YP_003654292.1| SurA domain-containing protein [Arcobacter nitrofigilis DSM 7299] gi|296095836|gb|ADG91786.1| SurA domain protein [Arcobacter nitrofigilis DSM 7299] Length = 283 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 94/304 (30%), Gaps = 29/304 (9%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K + + ++F ++ ++ + M + T+N E IT DI++++A L+ + Sbjct: 4 KQIKLFAKRVLFTLMATFTFSNAQMIDALALTVNDEPITTSDINQKMAETHLK------K 57 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 AV ELI + L KQE+EK IT D VN + + A + G+ F S L ++ + Sbjct: 58 ADAVSELIDQILYKQELEKQNITVDIFEVNDYLEKLAASNGMDLYTFKSILRQKNKNFDE 117 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 F+ + + + E V NK Sbjct: 118 FEAQTKKELMKKKLAAKLIRGNIPVATEEDLKIYYDNNKSMFTTASKINVTQYASKNKRS 177 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 Q + + + L Sbjct: 178 LIIMSQNPMALLNDVVKKDFTLEQDKLN---------------------PQLKFLLNDTK 216 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + T + + + K + +K + + +K EY +KL+ Sbjct: 217 DGSFTPIFTADRTFVMFFVKSKSGVTTLKFDEVKEKIFNALMGEREQKFLKEYFEKLKLT 276 Query: 312 AIIH 315 A I Sbjct: 277 ADIK 280 >gi|163781566|ref|ZP_02176566.1| hypothetical protein HG1285_01748 [Hydrogenivirga sp. 128-5-R1-1] gi|159882786|gb|EDP76290.1| hypothetical protein HG1285_01748 [Hydrogenivirga sp. 128-5-R1-1] Length = 275 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 34/290 (11%), Positives = 77/290 (26%), Gaps = 44/290 (15%) Query: 38 MSSRIRTTINGEVITDGDIS-------KRIALLKLQKINGELEKIAVQELIVETLKKQEI 90 I + VIT G+ + K + ++ E K + I + + Sbjct: 16 AGQGIVAKVGDRVITKGEFNSLFSFYWKEMLHFSPKRPTFEDRKRFLFRYIKGLIVEDLA 75 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 GI D V R D + ++ + ++ Sbjct: 76 PDMGIRVDDGEVLRRLRSWGRRN----------------PDPRLVMFARMELLLER-IER 118 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + + EI A K ++ + + + R R Sbjct: 119 RLVRETSVSDGEIEAYYILNKREFYYPNQVKLLRVVADSRDKAYRVYKALRSGGNVPRRE 178 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269 + +G+ ++ L + + + P + G Sbjct: 179 GIV-----------------VGRERWYSLQALPKRVKRRLYPYRVGVVSRPIKLETGYLI 221 Query: 270 IAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + I DKR + +K + + K ++ E+ K+ + + Y Sbjct: 222 LKITDKRKSGVMPLSEVKEKVKRKLLRIKRQEVLREWFKEALKSYRLEVY 271 >gi|120612784|ref|YP_972462.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli AAC00-1] gi|120591248|gb|ABM34688.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli AAC00-1] Length = 299 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 10/170 (5%), Positives = 41/170 (24%), Gaps = 5/170 (2%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + + + + + + +I+ E+ Sbjct: 109 AKVDKDNMLSDSAAEGLARNIYKAKPERFKVPEQVQVRHILIAGKGADSRAQIEKIEQEL 168 Query: 210 LRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKG 266 ++ + K G + + P+F + ++ G Sbjct: 169 KGGADFAQLAKERSADKGSAAKGGDLGFFEAGKMVPEFDKAAFALTKPGELSGIVESKFG 228 Query: 267 VEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + + +++ L + ++ + ++ A I Sbjct: 229 YHILQLEGRHAPRTRSFDEVRSELMQEVRANVQQEARVADAQAMQKEAKI 278 >gi|91783524|ref|YP_558730.1| putative PpiC-type peptidyl-prolyl cis- trans isomerase [Burkholderia xenovorans LB400] gi|91687478|gb|ABE30678.1| Putative PpiC-type peptidyl-prolyl cis- trans isomerase [Burkholderia xenovorans LB400] Length = 645 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 26/263 (9%), Positives = 67/263 (25%), Gaps = 17/263 (6%) Query: 52 TDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 T +R+ + Q++ ++ A +TL + E + + + + +A Sbjct: 149 TPDQYDERVRYSIATQQLPASIQGSAFTS---KTLAQHLTELAEQQREVQGIAFHPRDYA 205 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + ++ D + + ++ Sbjct: 206 AKVQPTDAQLQAYYDAHRNDFATPATATIQYLVMSP---ATLAASVQPGDADLKKYYDDN 262 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH--- 227 E +R I K + K + AEE ++ ++ + A + Sbjct: 263 IAHYRVEGQVRASHILIAAPKDASAADKAKAKQKAEELLAQIKAHPDQFAQIAQQNSQDP 322 Query: 228 --DVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GG 280 G Y + + ++ + T G + + D + Sbjct: 323 GSASKGGDLGYFGRGMIAGGQAFDDAVFALKKDEVSGIVQTDFGYHIVKVTDVKPAVTKP 382 Query: 281 EIALKAYLSAQNTPTKIEKHEAE 303 +K +S K + Sbjct: 383 FDEVKDQISKDLKTQLASKAFTD 405 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 20/228 (8%), Positives = 56/228 (24%), Gaps = 15/228 (6%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 + + ++ V I ++ + S ++NG IT + + + Sbjct: 9 KRLMMFMLILVIVPGLGFVGIQGFRGFFDESANVASVNGHKITRAEYDDAMRQQLDRARQ 68 Query: 70 -------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQHARNTG 114 E + LI + + E ++ +T + V + Sbjct: 69 MLGAQFDMKSFDTPERRSQMLDGLIEQRVLADETQRLHLTASDDAVRRVLLNDPVISSLK 128 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 KQ + + + + Q + + Sbjct: 129 NPDGTIDVDRYKQLLAMQGMTPDQYDERVRYSIATQQLPASIQGSAFTSKTLAQHLTELA 188 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++ ++ + F D + Q + + R ++ Sbjct: 189 EQQREVQGIAFHPRDYAAKVQPTDAQLQAYYDAHRNDFATPATATIQY 236 >gi|330507465|ref|YP_004383893.1| peptidyl-prolyl cis-trans isomerase C [Methanosaeta concilii GP-6] gi|328928273|gb|AEB68075.1| Peptidyl-prolyl cis-trans isomerase C [Methanosaeta concilii GP-6] Length = 94 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 1/83 (1%) Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-S 253 +K ++ E K++ S G + + + P+F+ + Sbjct: 12 CKTEKKALEVKELLASGQESFAQMARKYSQCPSGKSGGDLGWFGKGRMVPEFEKAAFEGE 71 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 + P +Q G I + DK+ Sbjct: 72 KGKIIGPVKSQFGYHLIRVLDKK 94 >gi|265767845|ref|ZP_06095377.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_16] gi|263252517|gb|EEZ24045.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_16] Length = 517 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 33/297 (11%), Positives = 75/297 (25%), Gaps = 41/297 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + V + C+ + A + ING+ IT + + Sbjct: 1 MKKILVGTLTCLFG--AIAGHAQQDPVLMRINGQDITRSEFER----------------- 41 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + + R L + Q G + Sbjct: 42 ------------------FCHRNKPSGIAGKETLKRCADLFVDMKLKLSAAQKAGLDTVS 83 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + ++ E +MK + + +F Sbjct: 84 DFRTEMENYHRALSRSYLTDSATDEAYAKKLYDQMKTRSAAGEVKVMRIFRYLPQTALPH 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG-KAQYLLESDLHPQFQNLLKKSQ 254 + +I + +K D +L S + Sbjct: 144 HLREAQILMDSLYHVLETHPDIDFRTLVNKYSDDKKEFWMGWLQTSQ--EFEEVAFSLKD 201 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRS 310 + P+ T KG++ I + +R++ ++ L + + +K +V KL+S Sbjct: 202 GEYSKPFFTPKGIQIIKVTGRREIPPFEQIRGELIHKLSRRPGTDKEIELWVNKLKS 258 >gi|254301623|ref|ZP_04969067.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia pseudomallei 406e] gi|157810736|gb|EDO87906.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia pseudomallei 406e] Length = 220 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 3/104 (2%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN-NTTNPYVTQK 265 ++ +F++ S G ++ + L +N + + P Sbjct: 112 NQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGSN 171 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 G + + DKRD+ + Q ++ +LR Sbjct: 172 GYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 213 >gi|124516599|gb|EAY58107.1| probable peptidil-prolyl cis-trans isomerase [Leptospirillum rubarum] Length = 289 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 76/307 (24%), Gaps = 50/307 (16%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL-QKINGEL 72 K L + ++ ++ S + + + I+ GD+ K++ + L + + Sbjct: 4 KPLKYASLFLLPILLSSCHKSSAPLPDSVLAKVGNTTISQGDLKKKLDSMGLASSKDPNV 63 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + +++ +L + K G+ + + + + Sbjct: 64 TSELLNQMVDNSLLAMQARKEGLDKTPEFKKKMHAYETKLLRKALLKKDVDDKVKVTDSD 123 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 Y Q +R V+F Sbjct: 124 IVNYYNKHQ----------------------------KDIKQPGYVDVRQVVFPD----- 150 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLK 251 KR + + K + G + E + P+F Sbjct: 151 ---EKTAKRDFPLLKKKGGFKKVTKMFK----------GGPVGKIYEGTVPPKFVSFFFG 197 Query: 252 KSQNNTTNPYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + T P + G+ Y I K + + + + V LR Sbjct: 198 VPEGSITGPIPLKDGIHYFKIDRSVKGVQLTLDQAREGIRNYLRNRQNKTIYQTLVNHLR 257 Query: 310 SNAIIHY 316 S + Sbjct: 258 STTTVQI 264 >gi|312879532|ref|ZP_07739332.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aminomonas paucivorans DSM 12260] gi|310782823|gb|EFQ23221.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aminomonas paucivorans DSM 12260] Length = 297 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 18/167 (10%), Positives = 39/167 (23%), Gaps = 6/167 (3%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG--FVQKRIKD 204 + R Y F + + + Sbjct: 111 LRWQRIRTLSQAYMERAAGAWDLGDQTLKRYYDAHRDQFVQAEAVHVRHILTEDEASARK 170 Query: 205 AEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNN-TTNPYV 262 A + L + + G +++ F++L+ + + P Sbjct: 171 ALLAVLGGADFAKTAAEQSRDKATAERGGDLEWVERGQTPKAFEDLVFSLRKDAVGGPVK 230 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 T G + + +KR + + E +KKLR Sbjct: 231 TDFGWHVVQVLEKRAARA--LSFEEAKGEVAQRLQRSYLEETLKKLR 275 >gi|326567917|gb|EGE18014.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis BC1] Length = 360 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 20/190 (10%), Positives = 58/190 (30%), Gaps = 8/190 (4%) Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-RTVLFSIPDNK 191 ++ +++ + K + + R +L + P + Sbjct: 156 ERAWLENEEATIAKLLEQKVIAKSPDKASCQNYYHANQVEFVSMPIMTLRHILLACPPQE 215 Query: 192 LQNQGFVQKRIKDAEESRL----RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + + ++K+ + + R ++++ G+ L + P+F+ Sbjct: 216 GEERIELKKQARQLIDRLNQSHNRDSDFIEFACRYSACPSKDDGGELGVLQKGSTVPEFE 275 Query: 248 NLLKKSQNNTT-NPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + + NP T+ G+ I + K++ + +Y Sbjct: 276 SAVFALPVGISINPIETRYGIHVIEVLQKQEGRQLSFEEAYPIIENHLKQQSFHHSLCDY 335 Query: 305 VKKLRSNAII 314 + +L A I Sbjct: 336 LFELSQKADI 345 >gi|121594044|ref|YP_985940.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax sp. JS42] gi|120606124|gb|ABM41864.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax sp. JS42] Length = 261 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 87/305 (28%), Gaps = 49/305 (16%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKINGELE 73 + + + + + + +NG+ + ++ K+ + + ELE Sbjct: 1 MKKKLLSGLVAAAVLGTMALPVAAQN-LAIVNGKAVPKERAEVLKQQVERSGRPVTPELE 59 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +E+I + QE +K G+ ++ Sbjct: 60 NQIKEEVIAREIFMQEAQKRGLEGSADYKAQ----------------------------- 90 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + ++ + + + +EY +L D Sbjct: 91 -MELARQTILIRELFVDFQKNNAVTDAEIQAEYDKFVAANAGKEYKASHILVEKEDEAKA 149 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLK 251 ++K K + +K + G + S +F + L+K Sbjct: 150 IIASIKK-----------GGKFEDIAKKQSKDPGSGTRGGDLDWASPSSYVAEFTEALVK 198 Query: 252 KSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + T P +Q G I + D R+ + Q ++ A++ + LR+ Sbjct: 199 LEKGKMTQTPVKSQFGWHVIRLDDVREAQL--PKLEEVKPQIAQQLQQQKLAKFQEDLRA 256 Query: 311 NAIIH 315 A + Sbjct: 257 KAKVE 261 >gi|170748998|ref|YP_001755258.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium radiotolerans JCM 2831] gi|170655520|gb|ACB24575.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium radiotolerans JCM 2831] Length = 277 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 36/294 (12%), Positives = 89/294 (30%), Gaps = 36/294 (12%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 + S ++ R +NG I+ IS+ + G + A+ L++ Sbjct: 1 MSACSVQALPNGPRTPIRVNGVTISRAVISREVQNHPAPTPVGAWKAAAL-ALVLREALS 59 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 QE+++ I + ++ + Sbjct: 60 QEVKRLDIRAEPAVDAE------------------------GRRETDEEACMRALVE--- 92 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + + E + + + + + +LFS ++ + + + Sbjct: 93 -REAVVPEPTEEECRRYHARNLARFRSPDIFEVSHILFSARADEASSFALARLNAETVIA 151 Query: 208 -SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT-NPYVTQ 264 R ++ G + + P+F++ + + + P T+ Sbjct: 152 MLRTDPDTFAELARAHSACPSGELGGSLGQVTQGQTTPEFEDALRRMTPGQVSTEPVETR 211 Query: 265 KGVEYIAI---CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 G I + D R L A++ ++A + + EA+YV +L A + Sbjct: 212 YGFHVIRLSRHIDGRTLP-FEAVRTCIAAYLSEAVRRRAEAQYVARLLGQARVE 264 >gi|187734680|ref|YP_001876792.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Akkermansia muciniphila ATCC BAA-835] gi|187424732|gb|ACD04011.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Akkermansia muciniphila ATCC BAA-835] Length = 357 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 33/294 (11%), Positives = 81/294 (27%), Gaps = 24/294 (8%) Query: 43 RTTINGEVITDGDISKRIALLKLQKIN------------------GELEKIAVQELIVET 84 + GE +T +S+R+ LK+ + G+L A +LI + Sbjct: 54 IAEVYGEPVTANQLSRRMTELKMLRQPPVLDMEGGIKLTHELDIPGDLAPRARYDLIGSS 113 Query: 85 LKKQEI--EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 L + + + + Q E + L Q + F++ +A + Sbjct: 114 LLRLKTSVNDLQLPNRNAEAARAVEQIRSRFDGDTEQYLKTLHGQKLTQEQFQKKIAARL 173 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + ++ +++ L +T + + V++ Sbjct: 174 KQTEQLYRATAQAAEASDEDLKTYYNLIRDQLTPPDLRKTRH-IFLATLNREEAQVRQTA 232 Query: 203 KDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY 261 + E +F+ + G+ ++ + L +N Sbjct: 233 ETLLERLKAGESFSRLAREFSEDERSAPAGGELGWISPARAKETLGLALADVPDNRPVLL 292 Query: 262 VTQKGVEYIAI--CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++ G + K L + + Y+ L A Sbjct: 293 KSRWGWHLVEASPVKKGKTPSYEEALPALRDAARSLRKAQAVGLYMDGLFEEAH 346 >gi|53722410|ref|YP_111395.1| rotamase [Burkholderia pseudomallei K96243] gi|52212824|emb|CAH38856.1| putative rotamase [Burkholderia pseudomallei K96243] Length = 244 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 3/104 (2%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN-NTTNPYVTQK 265 ++ +F++ S G ++ + L +N + + P Sbjct: 136 NQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGSN 195 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 G + + DKRD+ + Q ++ +LR Sbjct: 196 GYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 237 >gi|212709201|ref|ZP_03317329.1| hypothetical protein PROVALCAL_00234 [Providencia alcalifaciens DSM 30120] gi|212688113|gb|EEB47641.1| hypothetical protein PROVALCAL_00234 [Providencia alcalifaciens DSM 30120] Length = 622 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 40/398 (10%), Positives = 101/398 (25%), Gaps = 86/398 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T + + +++ F + + Y S+ +NG+ I+ + + Sbjct: 1 MMEDLRTKANSPFIKVLLAIIILSFVLTGVAGYVIGGSSNN-AAEVNGQPISKEQLQQAF 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + EL A+ LI L Q + ++ + Sbjct: 60 QQERQSLQEYLGDKFSEVASNDNYMKELRTQALNNLINNQLINQYANELQLSASDQQIEQ 119 Query: 105 FFVQH---ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV-------------- 147 N +E + L + I ++F + + + Sbjct: 120 AIFAMQIFQTNGKFDSEKYREILSRYNINADNFAAQIRQDLVRAQLGKSFTGTEFALPSE 179 Query: 148 --------VKND-----------FMLKYGNLEMEIPANKQKMKNITVREYLIRT------ 182 ++ K E E+ A +N + ++ Sbjct: 180 VKAYAELFMQEREVRTATLSLAALQAKQTVTEDELKAYYAANQNSFISPEQVQVSYVEMD 239 Query: 183 ------------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL----------- 219 + S + L+N ++++ + + Sbjct: 240 AASMPKASVTDEEVKSYYEQNLKNFTKAEQKLYSMIQVASEKDAQALEAELKGGADFATL 299 Query: 220 --EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 EK K + G ++ + + + + + P Q + D + Sbjct: 300 ATEKSTDKFSAGNKGVIGWMEATSTPSEIISANLTEKGQVSAPIKVQDNYVLFRLDDVKP 359 Query: 278 --LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + +K+ + K K + +K+ A Sbjct: 360 EAVKPFDEVKSSIETSLVQDKSVKQFYDLQQKVSEAAT 397 >gi|91215922|ref|ZP_01252891.1| putative exported peptidyl-prolyl cis-trans isomerase [Psychroflexus torquis ATCC 700755] gi|91185899|gb|EAS72273.1| putative exported peptidyl-prolyl cis-trans isomerase [Psychroflexus torquis ATCC 700755] Length = 485 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 30/281 (10%), Positives = 83/281 (29%), Gaps = 11/281 (3%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 + + ++ + DISK +K Q++ + ++ L + + F+ Sbjct: 65 DGVAAVVGDYLVLESDISKAYIDMKNQQVGEITYCDVAETILENKLFAHHAVQDSLPFNP 124 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV----VKNDFMLK 155 + V F Q L+ I + + + ++ + + Sbjct: 125 SRVESFTDQQIDQFVRQVGSMDKLLEFYKIDSESELRDQLNEINTQRMLAEEMQGSIVDE 184 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTV---LFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 E + + + + P+ + Q V ++ + + Sbjct: 185 VEITPEETRDFFEAIPKDEIPLINDEVELAQIIVRPEVGEKEQQAVIDKLNFYRDDVVAG 244 Query: 213 PKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 K ++ GK E + +F++ + + P+ T+ G + Sbjct: 245 GSFATKAVLYSEDRGSRSQGGKITLTREDNFVKEFKDAAFSLQEGEVSRPFETEFGWHIL 304 Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + R + L + + I+K + ++ +R Sbjct: 305 TVEKIRGQQVD-VRHILLYPEISSEAIQKA-KDEIELVRKK 343 >gi|319953958|ref|YP_004165225.1| ppic-type peptidyl-prolyl cis-trans isomerase [Cellulophaga algicola DSM 14237] gi|319422618|gb|ADV49727.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cellulophaga algicola DSM 14237] Length = 485 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 28/288 (9%), Positives = 81/288 (28%), Gaps = 22/288 (7%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQEIEKSGITF 97 + + +I + DI K + L+ Q + + +L+ + L + + I Sbjct: 63 DGVAAVVGDYLILESDIDKTLIDLRNQGVSADDVSRCSLLGKLMEDRLYAHQAVQDSILV 122 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV----VKNDFM 153 + VN + L D + + + ++ + Sbjct: 123 ADDEVNATSDAQIQQLVTRVGSMEKVLSFYKKTDEESFREELYKINKLRMLSERMQRKIV 182 Query: 154 LKYGNLEMEIPANKQKMKNITVREY----LIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + E+ K+ + I ++ + + Q V + + E+ Sbjct: 183 EEIEITPEEVRQFFNKIPKDQRPVFGSELEIAQIVKKPVAPEEEKQKVVDRLNRIREDIL 242 Query: 210 LRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 + K + + G + ++ +F+++ + + P+ T G Sbjct: 243 EKGSSFSIKAILNSEDPGSKQNGGYYKIDKQTGFVKEFKDVAFSLNVGEVSEPFETTFGY 302 Query: 268 EYIAICDKRDLGGEIALKAYLSAQNT----PTKIEKHEAEYVKKLRSN 311 I + + + P + + + +R+ Sbjct: 303 HIITVEKILGQ------EREIRHILMIPKVPQRALDASKQELDSIRNQ 344 >gi|269102133|ref|ZP_06154830.1| peptidyl-prolyl cis-trans isomerase PpiD [Photobacterium damselae subsp. damselae CIP 102761] gi|268162031|gb|EEZ40527.1| peptidyl-prolyl cis-trans isomerase PpiD [Photobacterium damselae subsp. damselae CIP 102761] Length = 565 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 26/262 (9%), Positives = 70/262 (26%), Gaps = 15/262 (5%) Query: 61 ALLKLQKINGELEKIAVQELI-VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 L + + + + E+ + + V + + AE Sbjct: 85 EQFAESLRTDLLRQQFLGAIEGSDFALSGEVNELRMLESQERVIRTLTLNLADFTKKAEA 144 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVK---NDFMLKYGNLEMEIPANKQKMKNITVR 176 + ++ + + +Q+ + V+ + + + N+ K K T Sbjct: 145 SITEEQEKAFYEQNPQQFTRPAQVKVSYVEITGDKLKDSIEVSDAQAYYNEHKDKFSTPE 204 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQ 235 + + +L + +++ + +K + GK + Sbjct: 205 KRQVSHILI------TGDSAASKEKAEAILAQLKDGANFAELAKKDSDDKFSAKDGGKLE 258 Query: 236 YLLESDLHPQFQNLLKK--SQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQ 291 + + + P F++ + + + G I + +KA + A Sbjct: 259 WFEKGVMDPAFEDAAFALAKPGDLSGVVKSSFGYHIILLDGIEPAKAKPFADVKAEIIAD 318 Query: 292 NTPTKIEKHEAEYVKKLRSNAI 313 K KL A Sbjct: 319 IKSQKAGDEFYAMQTKLAETAF 340 >gi|326572731|gb|EGE22717.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis BC7] gi|326574047|gb|EGE23996.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis CO72] gi|326577330|gb|EGE27217.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis O35E] Length = 367 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 20/190 (10%), Positives = 58/190 (30%), Gaps = 8/190 (4%) Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-RTVLFSIPDNK 191 ++ +++ + K + + R +L + P + Sbjct: 163 ERAWLENEEATIAKLLEQKVIAKSPDKASCQNYYHANQVEFVSMPIMTLRHILLACPPQE 222 Query: 192 LQNQGFVQKRIKDAEESRL----RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + + ++K+ + + R ++++ G+ L + P+F+ Sbjct: 223 GEERIELKKQARQLIDRLNQSHNRDSDFIEFACRYSACPSKDDGGELGVLQKGSTVPEFE 282 Query: 248 NLLKKSQNNTT-NPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + + NP T+ G+ I + K++ + +Y Sbjct: 283 SAVFALPVGISINPIETRYGIHVIEVLQKQEGRQLSFEEAYPIIENHLKQQSFHHSLCDY 342 Query: 305 VKKLRSNAII 314 + +L A I Sbjct: 343 LFELSQKADI 352 >gi|326559933|gb|EGE10332.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis 103P14B1] gi|326573879|gb|EGE23831.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis 101P30B1] Length = 342 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 20/190 (10%), Positives = 58/190 (30%), Gaps = 8/190 (4%) Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-RTVLFSIPDNK 191 ++ +++ + K + + R +L + P + Sbjct: 138 ERAWLENEEATIAKLLEQKVIAKSPDKASCQNYYHANQVEFVSMPIMTLRHILLACPPQE 197 Query: 192 LQNQGFVQKRIKDAEESRL----RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + + ++K+ + + R ++++ G+ L + P+F+ Sbjct: 198 GEERIELKKQARQLIDRLNQSHNRDSDFIEFACRYSACPSKDDGGELGVLQKGSTVPEFE 257 Query: 248 NLLKKSQNNTT-NPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + + NP T+ G+ I + K++ + +Y Sbjct: 258 SAVFALPVGISINPIETRYGIHVIEVLQKQEGRQLSFEEAYPIIENHLKQQSFHHSLCDY 317 Query: 305 VKKLRSNAII 314 + +L A I Sbjct: 318 LFELSQKADI 327 >gi|241763913|ref|ZP_04761956.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax delafieldii 2AN] gi|241366808|gb|EER61240.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax delafieldii 2AN] Length = 261 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 78/303 (25%), Gaps = 45/303 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + + + + I +NG+ + + L + Sbjct: 1 MKKQLLSGLVAAAVLGTMALPVSAQNI-AIVNGKAVPK-------------ERAEVLRQQ 46 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 E + + + + Sbjct: 47 V------ERSGRPVTPEMEGQIKEEVIAREIFMQEAQKRGLEASPDYKVQ---------- 90 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 LA Q+I + D+ + EI A K + + + Sbjct: 91 MELARQTILIRELFADYQKNNTVTDAEIQAEYDKFVAANSGKEYKASHILV--------- 141 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKS 253 + K S + K +K + G + + +F + L+K Sbjct: 142 -EKEADAKAIIASIKKGAKFEEIAKKQSKDPGSGAKGGDLDWANPASYVSEFTEALIKLD 200 Query: 254 QNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + T+ P +Q G I + D R + Q ++ A++ ++LR+ A Sbjct: 201 KGKMTDAPVKSQFGWHVIRLDDVRQAQL--PKLDEVKPQIAQQLQQQKLAKFQEELRAKA 258 Query: 313 IIH 315 + Sbjct: 259 KVE 261 >gi|91779927|ref|YP_555135.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia xenovorans LB400] gi|91692587|gb|ABE35785.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia xenovorans LB400] Length = 313 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 72/301 (23%), Gaps = 55/301 (18%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 + + S + + + +N IT + + + L ++LI L + Sbjct: 54 LATAAAGSTPLPAGVVARVNNISITQDQVDQIVHTTNAPDTPA-LRANIKEQLIARELFR 112 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 Q EK +I Sbjct: 113 QAAEKDHYATKPEVQAAI------------------------------DQAKNAAIVQAY 142 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 +++ + + + EY + + + Sbjct: 143 LRDQIKPAPVTDADVKAQYDKVIATLGDSEYKPSVI-----------AVKDAATAQTILD 191 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYL----------LESDLHPQFQNLLKKSQNNT 257 + ++++ G ++ ++ P + L+K Q Sbjct: 192 QLKKGVDFAQLAKQYSQGPAAAQGGAQNWISFKTPIQAGNTQNWPQPLAEALVKLPQGAV 251 Query: 258 -TNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + P + + KR + K L Q ++K A+ V L NA I Sbjct: 252 SSEPVQVGDAFWILRVDQKRPTQIPPFDQTKDVLRRQLEQAAMQKATAQVVVGLIRNAHI 311 Query: 315 H 315 Sbjct: 312 Q 312 >gi|325265616|ref|ZP_08132306.1| peptidyl-prolyl cis-trans isomerase [Kingella denitrificans ATCC 33394] gi|324982886|gb|EGC18508.1| peptidyl-prolyl cis-trans isomerase [Kingella denitrificans ATCC 33394] Length = 608 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 18/164 (10%), Positives = 49/164 (29%), Gaps = 6/164 (3%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 D + K E+ A + I ++ + P + + + Sbjct: 222 KDLVDKQTVSAEEVQAALKTATTNQKPTRRIAHIMINAPKSADAATRQKAREQAEKIAQE 281 Query: 210 LRL--PKDCNKLEKFASKI-HDVSIGKAQYLLESDLH--PQFQNLLKKSQNNTTNPYVTQ 264 + K ++++ + G L + L P K +Q ++ T Sbjct: 282 AKASPDKFAELAKQYSQDTGSAQNGGDLGALTQGSLPAKPLDDAAFKLAQGAVSDVVETD 341 Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 G + + + A +A + + K ++ + +++ Sbjct: 342 FGYHIVRVLEI-QGNDAAAQEARVRQELQLKKAQQAYEKIREEI 384 >gi|145640678|ref|ZP_01796261.1| peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae R3021] gi|145274604|gb|EDK14467.1| peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae 22.4-21] Length = 622 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 45/383 (11%), Positives = 107/383 (27%), Gaps = 84/383 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + I + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLTNSKISKFILGLITVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 AL---LKLQKINGE-------------LEKIAVQELIV-----------------ETLKK 87 ++ Q+ L + V +I E +K+ Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 VK D M K + EI + + V+ ++ Sbjct: 181 VKNSAEVFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 185 ------------------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + Q ++ K A E + + + Sbjct: 241 ADNISRNLQVTDVEIAQYYQDNKAQFMTQHLAHIQFANEQDAKVAYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ E++L F++ + P + + +++ Sbjct: 301 AKSLDKISGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHE 301 +KA ++ + +E Sbjct: 360 QSLENVKAQIADLVRKSLMESRY 382 >gi|157804053|ref|YP_001492602.1| hypothetical protein A1E_04460 [Rickettsia canadensis str. McKiel] gi|157785316|gb|ABV73817.1| hypothetical protein A1E_04460 [Rickettsia canadensis str. McKiel] Length = 295 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 91/303 (30%), Gaps = 23/303 (7%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELE 73 L++ + + A I ++N E IT + R ++ + +L Sbjct: 4 LLLIIGIVFTFNVAQASRPNIVASVNDEPITLNEFLARKKMIIALNNVESLTPAQDKQLS 63 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +A++ LI E+L Q ++ + +L + + Sbjct: 64 DLAIKSLIDESLLFQYAGDRE--ITQEEIDNAIKSIEDRNKMPHGSLLQYLKSRSVNPGS 121 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 F + + I +++ + EI V + + Sbjct: 122 FIAQIKSELIKMNILSS-LSRSVQVSNKEIDVAILSSDQKDVEISMQVFTSKHSGNTAFT 180 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 ++ R+K + + L + ++ +K+ + Q + + Sbjct: 181 QMNNLKNRLKKCTDVKQSLYDNFATMQIITNKLSKIE------------DVQQTIIKDLT 228 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 N +N + E I +C K+ L Y+ T KI + + + +R A Sbjct: 229 PNKASNVFEVNNKFEIILVCSKKILNLNEDENNYVVNYLTNKKISQKAQKIFENMRKKAS 288 Query: 314 IHY 316 I Sbjct: 289 IKI 291 >gi|326565373|gb|EGE15551.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella catarrhalis 12P80B1] Length = 614 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 33/393 (8%), Positives = 84/393 (21%), Gaps = 88/393 (22%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT----DGDISKRI 60 + L + L LI + + ++ + + +V+ +++ Sbjct: 1 MRNFLKSWPGRLVLVGTLIPMAFLGVGTFGGHTIQPNELIKVGNQVVDVATFQAEVNAER 60 Query: 61 ALLKLQ------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 L Q L+++ ++ L + L + + G+T + + Sbjct: 61 NALIEQGVDASLINEHALQQLILKRLTDKALLENQASYLGMTVSDEMITQILQHYEVFHD 120 Query: 115 LSAEDFSSFLDKQGIGDNHFK------------------------------------QYL 138 F Q Sbjct: 121 NGQFSNDRFAAYLQQNGLTKDVLFAIERLRLSLRQLITGIVGTAIYPNSEVSKLIDLQLE 180 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ----- 193 A + D++ + + +I A + ++ ++ + + N L Sbjct: 181 AREVWVHRYHWQDYVDQVQISDAQIQAYFDEHQDKLIKPATVDLSYIELDPNVLSVGTPT 240 Query: 194 ----------------------------NQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 Q R + + + Sbjct: 241 EQEINAQYANYLRENGITDGRELAQILLTGPDAQNRAAKIQSKLNAGESFEALAKAHSDD 300 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK----SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G S + + S + P T G + + + Sbjct: 301 PSGSNGGVIGSFNPSVFGEYAAGVEQALSGLSVGQISQPVQTGFGYHIFKVT---KVSND 357 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 A + Q + + L +A I Sbjct: 358 TPNIASMRDQLMDRAAKLKRDQAFADL--SAKI 388 >gi|268316323|ref|YP_003290042.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus DSM 4252] gi|262333857|gb|ACY47654.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus DSM 4252] Length = 696 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 18/242 (7%), Positives = 60/242 (24%), Gaps = 19/242 (7%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 +T+ D+ + + ++ + K+ D+ V + Sbjct: 217 VTESDLRRYYNEHRDDFKRKRTYRVV----------YVALPKNPTAEDTLQVLEELNRLK 266 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS-------IWPDVVKNDFMLKYGNLEMEI 163 + D + + ++ D + + Sbjct: 267 ERFAQTENDSLFLARYASERPFTDAFFRRDELDPALGDVVFDDPQPGKVVGPVVAGGLAH 326 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + ++ R +L P+ + + ++ + + + + + Sbjct: 327 LVKIRAVRPSEETVIRARHILIRAPEGDAEARRQARQEALELKRQLEQGADFATLAREHS 386 Query: 224 SKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGE 281 G + + F+ + P T+ G I + + ++ + Sbjct: 387 DDPGSARRGGDLGWFGRGRMVEPFEEAAFSAPIGRVVGPIETRFGYHLIEVTGRSNVEVQ 446 Query: 282 IA 283 IA Sbjct: 447 IA 448 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 39/378 (10%), Positives = 102/378 (26%), Gaps = 70/378 (18%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----IS 57 +K+ + + +L F II+ + ++ + +NG+ I+ + + Sbjct: 4 MNKLRENTGVILWILVISF-GIIWVLQDSGAFDVVGRTGDTIAEVNGDPISYQEYVRAVE 62 Query: 58 KRIALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---- 106 ++ + Q + + L+ E L++Q +E+ GIT + V Sbjct: 63 AQMQAYQQQTGEAPTPQMSDLIREQVFNALVEERLRQQAMERLGITVTDDEVVQMVLGDN 122 Query: 107 -----------------VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI------ 143 +N + ++ + + Q + Sbjct: 123 PHPIIKAYFGDENGNVNRALLQNFIDNPAAREDWIRLEEYLRAERARQKLEQLLLATVHV 182 Query: 144 WPDVVKNDFMLK--------------------YGNLEMEIPANKQKMKNITVREYLIRTV 183 V+ ++ + E ++ + ++ R+ R V Sbjct: 183 SDQEVEEEYRRRTLRADARYVALRYAEVPDDSVTVTESDLRRYYNEHRDDFKRKRTYRVV 242 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 ++P N + +++ + R + N A + + +L Sbjct: 243 YVALPKNPTA--EDTLQVLEELNRLKERFAQTENDSLFLARYASERPFTD-AFFRRDELD 299 Query: 244 PQFQN--LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS------AQNTPT 295 P + P V + I R + ++ Sbjct: 300 PALGDVVFDDPQPGKVVGPVVAGGLAHLVKIRAVRPSEETVIRARHILIRAPEGDAEARR 359 Query: 296 KIEKHEAEYVKKLRSNAI 313 + + E ++L A Sbjct: 360 QARQEALELKRQLEQGAD 377 Score = 38.1 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 7/79 (8%), Positives = 22/79 (27%), Gaps = 1/79 (1%) Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK-RDLGGEIALKAYLSAQNTPTKIE 298 + + T+ + + + ++ + Q + + Sbjct: 612 GREPRFIGTVFGLQEGTTSGVVEGENAAFVVQLTKLYEPPPLGEQMREQIRQQLLNQRRQ 671 Query: 299 KHEAEYVKKLRSNAIIHYY 317 + +++ LR A I Y Sbjct: 672 QVLTQWLAALREQADIKDY 690 >gi|167586935|ref|ZP_02379323.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ubonensis Bu] Length = 644 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 24/273 (8%), Positives = 61/273 (22%), Gaps = 22/273 (8%) Query: 53 DGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 D+ + LL Q + ++ L ++ + + + R Sbjct: 133 SIDVERYAQLLSFQGMTPEQYQERVRYSLALQQIPASIVSSAFTPKSLAQRLSELAAQQR 192 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ---------SIWPDVVKN--DFMLKYGNLE 160 S + K D Y Q + +V + + Sbjct: 193 EVQALVLKTSDYASKVQPTDAQLAAYYDAQKQSFATPETATIQYLVYSPAAAAANAQPTD 252 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +I E +R I + AE+ + ++ Sbjct: 253 ADIKKFYDDNPTHFRTEAQVRVSHIFIAAAGDASAADKAAAKAKAEQLLADVKAHPDQFA 312 Query: 221 KFA-----SKIHDVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 + A G ++ Q + + + G + Sbjct: 313 QIAQKSSQDAPSAAKGGDLGFITRGSTAGGKAFDDAAFALKQGDVSGVVQSDLGFHILKA 372 Query: 273 CDKRDL--GGEIALKAYLSAQNTPTKIEKHEAE 303 + + +K ++ + K ++ Sbjct: 373 TEVKPAAVKPFAEVKDAIAVELKQQYASKAFSD 405 Score = 43.9 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 22/211 (10%), Positives = 55/211 (26%), Gaps = 15/211 (7%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVIT--------DGDISKRIALLKLQ-----KINGELE 73 V I ++ + S +NG IT I + L Q E Sbjct: 26 FVGIQGFRGFFDESANVAAVNGHKITRVEFDGTYRQQIDRARQALGAQFDLKSFDTPEHR 85 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQHARNTGLSAEDFSSFLDKQGIGD 131 K + LI + + E ++ +T N V + Q + Sbjct: 86 KEVLDGLIQQRVLADETQRLHLTASDNAVREALLSDPMIASLKKPDGSIDVERYAQLLSF 145 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + + + Q++ + ++ ++ ++ D Sbjct: 146 QGMTPEQYQERVRYSLALQQIPASIVSSAFTPKSLAQRLSELAAQQREVQALVLKTSDYA 205 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q + + + ++ Sbjct: 206 SKVQPTDAQLAAYYDAQKQSFATPETATIQY 236 >gi|165919397|ref|ZP_02219463.1| conserved hypothetical protein [Coxiella burnetii RSA 334] gi|165916913|gb|EDR35517.1| conserved hypothetical protein [Coxiella burnetii RSA 334] Length = 522 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 34/320 (10%), Positives = 83/320 (25%), Gaps = 41/320 (12%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSY-KSWAMSSRIRTTINGEVITDGDIS-- 57 M + + +I L V + F + + Y +S ++ +NGE I++ +++ Sbjct: 1 MLQNIHERVKGWIAGLILAVVSLSFVLWGVQYYLQSEGGKNKTVAKVNGEKISENELNVV 60 Query: 58 -KRIALLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 +R+ + L++ A+Q LI+ + EK G +N Sbjct: 61 FQRLQRAYSLQRGQTLVGAKAEALKEEALQNLIMNHVLLDSAEKMGFNISPAEINQIITV 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 F Q++A + + +P + Sbjct: 121 LPAFQENGKFSPQRFQQFLYENSLTSAQFVAQ--LLQVFLIQQVEKGITGSAFVLPNEIK 178 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + R ++ S +++ + ++ R + Sbjct: 179 NNYELINQARDFRYMIISSAPFLKESKVTPEMIADYYQKHRESFKAPEKLSIAYLLLS-- 236 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + + S + R+ +K + Sbjct: 237 --------------PEMIRQQVSVSDHEIKQ-----------YYESNREGKSFNQVKDQI 271 Query: 289 SAQNTPTKIEKHEAEYVKKL 308 KI + +L Sbjct: 272 KQSLLQQKINTLLTKKSDQL 291 >gi|154149760|ref|YP_001403378.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Methanoregula boonei 6A8] gi|153998312|gb|ABS54735.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methanoregula boonei 6A8] Length = 93 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 22/75 (29%), Gaps = 1/75 (1%) Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP-QFQNLLKKSQNNTTNPY 261 + ++F+S S G + ++ + P Q P Sbjct: 19 NKILKRIKDGEDFAAVAKRFSSCPSKKSGGDLGWFGKNQMVPEFEAAAFAADQGTVVGPV 78 Query: 262 VTQKGVEYIAICDKR 276 +Q G I + K+ Sbjct: 79 KSQFGYHVIKVTGKK 93 >gi|304382090|ref|ZP_07364601.1| peptidyl-prolyl cis-trans isomerase [Prevotella marshii DSM 16973] gi|304336688|gb|EFM02913.1| peptidyl-prolyl cis-trans isomerase [Prevotella marshii DSM 16973] Length = 473 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 29/292 (9%), Positives = 75/292 (25%), Gaps = 36/292 (12%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 + + + S A + I TI G+ ++ + ++ + + Sbjct: 5 ALLISLLLWSMIVAAQTDPIIMTIAGQPVSRSEFE-------YSYNKNNGKEAIDPKTVE 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E + K + + Q Sbjct: 58 EYAELFINYKLKVRAALDARLDTLSSFKN----------------------EFTVYRNQQ 95 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + P ++ +I ++ + + + + ++RI Sbjct: 96 VKPLLIT---DADVEAEARKIYEQRRAQIGDKGLIHPAHIFIRVPQNAPKEALDRAKQRI 152 Query: 203 KDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260 + EK++ G + + F+ + T P Sbjct: 153 DSIYAALRGGADFATLAEKYSEDPMSARQGGALPWFAPGETLEDFEKTAYRLKTGETAPP 212 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 ++ G I + D++ + LKA + I + A+ ++L+ A Sbjct: 213 MLSFAGYHIIRMLDRKQMEPFDELKADIIRALKTRNIREKIAD--ERLKEMA 262 >gi|161830280|ref|YP_001597297.1| hypothetical protein COXBURSA331_A1623 [Coxiella burnetii RSA 331] gi|161762147|gb|ABX77789.1| conserved hypothetical protein [Coxiella burnetii RSA 331] Length = 522 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 34/320 (10%), Positives = 83/320 (25%), Gaps = 41/320 (12%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSY-KSWAMSSRIRTTINGEVITDGDIS-- 57 M + + +I L V + F + + Y +S ++ +NGE I++ +++ Sbjct: 1 MLQNIHERVKGWIAGLILAVVSLSFVLWGVQYYLQSEGGKNKTVAKVNGEKISENELNVV 60 Query: 58 -KRIALLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 +R+ + L++ A+Q LI+ + EK G +N Sbjct: 61 FQRLQRAYSLQRGQTLVGAKAEALKEEALQNLIMNHVLLDSAEKMGFNISPAEINQIITV 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 F Q++A + + +P + Sbjct: 121 LPAFQENGKFSPQRFQQFLYENSLTSAQFVAQ--LLQVFLIQQVEKGITGSAFVLPNEIK 178 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + R ++ S +++ + ++ R + Sbjct: 179 NNYELINQARDFRYMIISSAPFLKESKVTPEMIADYYQKHRESFKAPEKLSIAYLLLS-- 236 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + + S + R+ +K + Sbjct: 237 --------------PEMIRQQVSVSDHEIKQ-----------YYESNREGKSFNQVKDQI 271 Query: 289 SAQNTPTKIEKHEAEYVKKL 308 KI + +L Sbjct: 272 KQSLLQQKINTLLTKKSDQL 291 >gi|301631437|ref|XP_002944804.1| PREDICTED: chaperone surA-like [Xenopus (Silurana) tropicalis] Length = 255 Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 12/108 (11%), Positives = 39/108 (36%), Gaps = 4/108 (3%) Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN--LLKKSQNNTTNPYVTQKGVEY 269 + ++++ G+ +L D P+F + + ++ G+ Sbjct: 139 GTRFAQAARQWSNCPSGQEGGELGWLRAEDCAPEFARAVFGTQEVGVLSRLVHSRFGLHV 198 Query: 270 IAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +C+++ + ++A ++ +Y++ L NA + Sbjct: 199 VEVCERQPGEALPFEQIRASVALLLRQQAWVNALRQYLQLLVDNAEVE 246 >gi|241763440|ref|ZP_04761494.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax delafieldii 2AN] gi|241367382|gb|EER61703.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax delafieldii 2AN] Length = 247 Score = 70.1 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 13/170 (7%), Positives = 40/170 (23%), Gaps = 5/170 (2%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + + + + G + + + E Sbjct: 62 AKIDKDSAPSDAVAEGQARNIYKAKPDRFQAPEQVQVRHILIAGTDGGARAQAEKVLEEL 121 Query: 210 LRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKG 266 ++ ++ G + P+F K + + T+ G Sbjct: 122 KAGADFAQLAKERSADTGSGAKGGDLGLFARGRMVPEFDEAAFALKQPGDLSGIVETKFG 181 Query: 267 VEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + +R G ++ L + + +K++ I Sbjct: 182 FHILKLDARRPAGLRPYEEVREELIKEVRGKLQQDARVAEAEKVQQGLTI 231 >gi|226224827|ref|YP_002758934.1| post-translocation molecular chaperone [Listeria monocytogenes Clip81459] gi|254825217|ref|ZP_05230218.1| rotamase [Listeria monocytogenes FSL J1-194] gi|254853343|ref|ZP_05242691.1| export protein [Listeria monocytogenes FSL R2-503] gi|254992110|ref|ZP_05274300.1| post-translocation molecular chaperone [Listeria monocytogenes FSL J2-064] gi|255520683|ref|ZP_05387920.1| post-translocation molecular chaperone [Listeria monocytogenes FSL J1-175] gi|300763971|ref|ZP_07073967.1| protein export protein [Listeria monocytogenes FSL N1-017] gi|225877289|emb|CAS06003.1| Putative post-translocation molecular chaperone [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258606707|gb|EEW19315.1| export protein [Listeria monocytogenes FSL R2-503] gi|293594463|gb|EFG02224.1| rotamase [Listeria monocytogenes FSL J1-194] gi|300515312|gb|EFK42363.1| protein export protein [Listeria monocytogenes FSL N1-017] Length = 293 Score = 70.1 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 29/304 (9%), Positives = 84/304 (27%), Gaps = 40/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + ++ + S + + T + +T ++ + + Sbjct: 1 MKKKLILGLVMMMALFSLAACGGGGDVVKT-DSGDVTQDELYDAMK--------DKYGSE 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 VQ+L E + + + S D + + + Sbjct: 52 FVQQLTFEKILGDKYKVSDEDVD------------KKFNEYKSQYGDQFSAVLAQSGLTE 99 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + +V+ + + + + Sbjct: 100 KSFKSQLKYNLLVQKATEANTDTSDKTLKKYYET---------------WQPDITVSHIL 144 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--K 252 + + K+ E+ K + +++++ + G+ + P F+ K Sbjct: 145 VADENKAKEVEQKLKDGAKFADLAKEYSTDTATKDNGGQLAPFGPGKMDPAFEKAAYALK 204 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKKLRSN 311 ++ + + P TQ G I + K + A ++ + +KK + Sbjct: 205 NKGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKKEYKD 264 Query: 312 AIIH 315 A + Sbjct: 265 ANVK 268 >gi|46908453|ref|YP_014842.1| protein export protein [Listeria monocytogenes serotype 4b str. F2365] gi|47094429|ref|ZP_00232114.1| protein export protein [Listeria monocytogenes str. 4b H7858] gi|254931668|ref|ZP_05265027.1| rotamase [Listeria monocytogenes HPB2262] gi|67461025|sp|Q71XE6|PRSA2_LISMF RecName: Full=Foldase protein prsA 2; Flags: Precursor gi|46881724|gb|AAT05019.1| protein export protein [Listeria monocytogenes serotype 4b str. F2365] gi|47017195|gb|EAL08043.1| protein export protein [Listeria monocytogenes str. 4b H7858] gi|293583223|gb|EFF95255.1| rotamase [Listeria monocytogenes HPB2262] gi|328472118|gb|EGF42993.1| post-translocation molecular chaperone [Listeria monocytogenes 220] gi|332312671|gb|EGJ25766.1| Foldase protein prsA 1 [Listeria monocytogenes str. Scott A] Length = 293 Score = 70.1 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 29/304 (9%), Positives = 84/304 (27%), Gaps = 40/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + ++ + S + + T + +T ++ + + Sbjct: 1 MKKKLILGLVMMMALFSLAACGGGGDVVKT-DSGDVTQDELYDAMK--------DKYGSE 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 VQ+L E + + + S D + + + Sbjct: 52 FVQQLTFEKILGDKYKVSDEDVD------------KKFNEYKSQYGDQFSAVLAQSGLTE 99 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + +V+ + + + + Sbjct: 100 KSFKSQLKYNLLVQKATEANTDTSDKTLKKYYET---------------WQPDITVSHIL 144 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--K 252 + + K+ E+ K + +++++ + G+ + P F+ K Sbjct: 145 VADENKAKEVEQKLKDGAKFADLAKEYSTDTATKDNGGQLAPFGPGKMDPAFEKAAYALK 204 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKKLRSN 311 ++ + + P TQ G I + K + A ++ + +KK + Sbjct: 205 NKGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKKEYKD 264 Query: 312 AIIH 315 A + Sbjct: 265 ANVK 268 >gi|228942849|ref|ZP_04105367.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228816835|gb|EEM62942.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 284 Score = 70.1 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 43/122 (35%), Gaps = 4/122 (3%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256 +K K+ +E ++++ G+ ++ +F+ K Sbjct: 149 EKTAKEIKEKLNNGEDFAALAKQYSEDPGSKEKGGELPEFGPGEMDSKFEEAAYKLEAGQ 208 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK--IEKHEAEYVKKLRSNAII 314 ++P + G I + +K++L K + + + ++ + ++ K L A I Sbjct: 209 VSDPIKSSHGYHIIKLTEKKELKPFDQEKDNIRKELEQKRSQDQQWQQQFFKDLFKKADI 268 Query: 315 HY 316 Sbjct: 269 KI 270 >gi|257095903|ref|YP_003169544.1| nitrogen fixation protein NifM [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048427|gb|ACV37615.1| nitrogen fixation protein NifM [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 277 Score = 70.1 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 25/243 (10%), Positives = 69/243 (28%), Gaps = 13/243 (5%) Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + ++ LI+ET + + + D++ + R +++ + L++ G+ Sbjct: 39 RQQEIEVLILETPEAASVMLPAASIDASLME------IRRRYADDDEYHAELERVGLDAA 92 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +Q +A + V++ + ++ + + N+ Sbjct: 93 ALRQAVARDLVVEAVLERVAAAAAPVSDTDVEIFWYMNQQRFRHGETRVLRHLLVTINEN 152 Query: 193 QNQGFVQKRIKDAEESRLRL----PKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQ 247 Q E R RL + + K + V G + L Sbjct: 153 LAGNERQTARARIEAIRARLLREPQRFAEQALKHSECPTAVHGGLLGRVPRGQLYPQVDA 212 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYV 305 ++ + ++ G I + + + + + ++ Sbjct: 213 AAFTLAEGMLSEVIESELGYHLIRCEAIQHERLLSFAEARQTIREHLDGQQQALCQKAWI 272 Query: 306 KKL 308 K L Sbjct: 273 KAL 275 >gi|242279457|ref|YP_002991586.1| hypothetical protein Desal_1987 [Desulfovibrio salexigens DSM 2638] gi|242122351|gb|ACS80047.1| conserved hypothetical protein [Desulfovibrio salexigens DSM 2638] Length = 319 Score = 70.1 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 101/311 (32%), Gaps = 27/311 (8%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--------LLKLQKI 68 ++ + + ++ + I +NG I + + + + Sbjct: 1 MKKILIGVLLACSLFGCQNKSEEPGIIARVNGNPIYLSQLEYKYDLTHEGVGGFVPSVEQ 60 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + +LIV+ L QE+E+ I + + + + F L ++ Sbjct: 61 VRAEYGQILGDLIVQELVAQELEQREIPVSDKELKEAEDEVRSD--YPDDSFEQILIEEY 118 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 I N ++ L Q ++ + E + + + V+ Sbjct: 119 IDINAWRSQLKYQLAMDKFFQDILRPEIKIDYKEAEKYYRTHLSDFYMPAGYKFVMVKGM 178 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 D + L ++ ++K+ VS+ + ++ + ++ Sbjct: 179 GK-------------DLVLKGVDLYREGLTPAAISAKLRKVSVREI-WIRNGQIPANWKP 224 Query: 249 LLKKSQNNTTNPYVTQKG-VEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYV 305 ++ + P +TQK V + + +K++ L+AY + K+++ ++ Sbjct: 225 FVEDLEPGKATPVITQKKEVFCLILKEKKEATLLTPLQAYPMVEKVLLERKLKEKFESWL 284 Query: 306 KKLRSNAIIHY 316 K+ + + I Sbjct: 285 KEKMATSKIKI 295 >gi|260581919|ref|ZP_05849715.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae NT127] gi|260095112|gb|EEW79004.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae NT127] Length = 622 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 46/395 (11%), Positives = 111/395 (28%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + I + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLTNSKISKFILGLITVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 AL---LKLQKINGE-------------LEKIAVQELIVETLKKQEIE------------- 91 ++ Q+ L + V +I + L +Q ++ Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 92 ----KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 VK D M K + EI + + V+ ++ + Sbjct: 181 VKNSAEIFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 189 DNKLQNQGFV----------------------------QKRIKDAEESRLRLPKDCNKLE 220 + + V ++ K A E + + + Sbjct: 241 ADNISKNLQVTDIEIAQYYQDNKAQFMTQRLAHIQFANEQDAKVAYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ ++L F++ + P + + +++ Sbjct: 301 TKSLDKISGENGGDLGWVNANELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA ++ + +E K+ A Sbjct: 360 QSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394 >gi|50121865|ref|YP_051032.1| nitrogen fixation protein [Pectobacterium atrosepticum SCRI1043] gi|49612391|emb|CAG75841.1| nitrogen fixation protein [Pectobacterium atrosepticum SCRI1043] Length = 265 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 12/154 (7%), Positives = 40/154 (25%), Gaps = 3/154 (1%) Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E+ ++ R T + + ++ ++ + + + Sbjct: 107 PTSAEVEQWYRRHAARFCRPEQRLTRHLLLTTGEDDSEAISRQLLALRRQLQSDTAAFAT 166 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276 E+ + + G ++ L L + T G + R Sbjct: 167 LAERHSQCPTALEGGLLGWVSRGLLFTSLDQALFTLHEGELSAIIETDIGWHLLLCEAIR 226 Query: 277 DLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + A + ++ + +++ +L Sbjct: 227 PETPMAQEDALAKAYDHLLLQRQKEQQRQWLVQL 260 >gi|222111223|ref|YP_002553487.1| ppic-type peptidyl-prolyl cis-trans isomerase [Acidovorax ebreus TPSY] gi|221730667|gb|ACM33487.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax ebreus TPSY] Length = 261 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 87/305 (28%), Gaps = 49/305 (16%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKINGELE 73 + + + + + + +NG+ + ++ K+ + + ELE Sbjct: 1 MKKKLLSGLVAAAVLGTMALPVAAQN-LAIVNGKAVPKERAEVLKQQVERSGRPVTPELE 59 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +E+I + QE +K G+ ++ Sbjct: 60 NQIKEEVIAREIFMQEAQKRGLEGSADYKAQ----------------------------- 90 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + ++ + + + +EY +L D Sbjct: 91 -MELARQTILIRELFVDFQKNNAVTDAEIQAEYDKFVAANAGKEYKASHILVEKEDEAKA 149 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLK 251 ++K K + +K + G + S +F + L+K Sbjct: 150 IIASIKK-----------GGKFEDIAKKQSKDPGSGARGGDLDWASPSSYVAEFTEALVK 198 Query: 252 KSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + T P +Q G I + D R+ + Q ++ A++ + LR+ Sbjct: 199 LEKGKMTQTPVKSQFGWHVIRLDDVREAQL--PKLEEVKPQIAQQLQQQKLAKFQEDLRA 256 Query: 311 NAIIH 315 A + Sbjct: 257 KAKVE 261 >gi|154149306|ref|YP_001405723.1| putative periplasmic protein [Campylobacter hominis ATCC BAA-381] gi|153805315|gb|ABS52322.1| putative periplasmic protein [Campylobacter hominis ATCC BAA-381] Length = 275 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 91/299 (30%), Gaps = 35/299 (11%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 + ++ + + + + + E IT +++K I L A++ LI Sbjct: 5 FVFLSLIFGFCLANADVINGVVAVVENEPITHYELNKMIKTRGLN------PNDALEVLI 58 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 L+ EI++ GI N A +S + + + KQG + FK+ + Sbjct: 59 KNKLQVAEIKRLGIITSDYETNERIKAIAAQNKISVDTMQASIKKQGGTWSEFKENVRNS 118 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + F ++ E Y ++ I N + Sbjct: 119 LQEEKLYAAIFKEVAKSVTPENVEKFYNENPSLFTTYDSVNLIRYISKNANALSAIKAGK 178 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNP 260 D + L S ++ + + + + Sbjct: 179 NADGVQKIS------------------------GVLKNSQMNESLRYVVSNVGPDGFSPI 214 Query: 261 YVTQKGVEYIAICDK---RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 T+ G E + K + E A + + A + +K + +KLRSNAII Sbjct: 215 IPTKLGYEMFKVNSKNGVNKISFEEAQQKAIEAYTISER-KKAIENFNQKLRSNAIIKI 272 >gi|311748699|ref|ZP_07722484.1| putative PPIC-type PPIASE domain protein [Algoriphagus sp. PR1] gi|126577231|gb|EAZ81479.1| putative PPIC-type PPIASE domain protein [Algoriphagus sp. PR1] Length = 666 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 26/256 (10%), Positives = 72/256 (28%), Gaps = 15/256 (5%) Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 R + + Q ++ ++ L LK ++ ++G + + Y A+ Sbjct: 137 RASHILFQFPPNASQEDSLSVL-RMALKVKDQIENGGDINELALEYSEDPSAKQNKGDLG 195 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 F++ Q D F + + + Sbjct: 196 YFTALQMVQPFEDAAFS-----------LQAGQVSDPVMTNFGYHIIKVLDKRPNPGQVR 244 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 + ++ D+ +K E + N ++ ++ + G + Sbjct: 245 VSHILVRIDADDPNAEDLARRKVADIYTEIQKENTVWENIVKNYSEDPASSQNGGMLPWF 304 Query: 238 LESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 + P+F+ + P T+ G + + DK+ + L+ + ++ Sbjct: 305 SVGSMIPEFEMAAFSLTEIGEVSPPVKTKYGYHILRLEDKKPIDSFEDLEESIRSRIMRD 364 Query: 296 KIEKHEAEYVKKLRSN 311 V ++ + Sbjct: 365 SRSTMIQSQVMAIQKS 380 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 24/215 (11%), Positives = 57/215 (26%), Gaps = 4/215 (1%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I +++ I+ ++ + F ++ K Sbjct: 39 IGGKPVEKDELIYLISKGKDSDPSSTGMSRDEFEENLNQFINYKLKVREAVELGMDESQE 98 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + K + Y +K + +LF P N Q Sbjct: 99 FLMEFESYKENLKAPYLIKNSLEEGELRKAYSRMQEVVRASHILFQFPPNASQEDSLSVL 158 Query: 201 RIK-DAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQNLLKK-SQNNT 257 R+ ++ +++ + G Y + F++ Sbjct: 159 RMALKVKDQIENGGDINELALEYSEDPSAKQNKGDLGYFTALQMVQPFEDAAFSLQAGQV 218 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292 ++P +T G I + DKR G +++ + Sbjct: 219 SDPVMTNFGYHIIKVLDKRPNPG-QVRVSHILVRI 252 >gi|294141764|ref|YP_003557742.1| peptidyl-prolyl cis-trans isomerase D [Shewanella violacea DSS12] gi|293328233|dbj|BAJ02964.1| peptidyl-prolyl cis-trans isomerase D [Shewanella violacea DSS12] Length = 621 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 26/267 (9%), Positives = 61/267 (22%), Gaps = 9/267 (3%) Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV--NYFFVQHARN 112 + + + + V L+ T Y V + Sbjct: 144 QLGYQANTFRNMMRTDMTRRQLVASLVGSEFVLPGETSYLAGIQGQTRDIRYHIVDASPF 203 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + F + + ++ D + E + K Sbjct: 204 VADAKVTDEQAQSFYDANLSQFMSPETLSLEYIELNVADMANDVSVTDAEAQTYYDENKQ 263 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSI 231 ++ I ++ + + + Sbjct: 264 QYLKPEKRLAAHILINLGDDESVSKAKAEAI--YAKLQAGDDFSELAKTESEDTFSGELG 321 Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 GK + + + P F + L S+ + + T G I + D + A A + Sbjct: 322 GKLDWFEQGVMDPAFDEVLYSLSKGSYSTVVKTSFGYHIIKLLDVQPGV--EAPFADVKD 379 Query: 291 QNTPTKIEKHEAEYVKKLRSN-AIIHY 316 +K + L+ A + Y Sbjct: 380 NIIAELKDKAAVDTYYGLQQTLADVTY 406 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 26/238 (10%), Positives = 66/238 (27%), Gaps = 19/238 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ I V++ F + SY + + T+NGE I++ + + Sbjct: 1 MLEKIREGSQGVIAKSILVLVILSFAFTGVSSYLGSSTEAA-AATVNGEDISESALEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + ++K ++ L+ E L Q + G+ + Sbjct: 60 QSERARLEQQMGDMFQALAANDTYLASVKKSVLERLVAEKLLDQSATELGLRVSDEQIKN 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + D +L + + D+ + + E +P Sbjct: 120 AIMIEPAFQTDGQFDNDRYLAILRQLGYQANTF--RNMMRTDMTRRQLVASLVGSEFVLP 177 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + I + IR + + ++ + + + ++ Sbjct: 178 GETSYLAGIQGQTRDIRYHIVDASPFVADAKVTDEQAQSFYDANLSQFMSPETLSLEY 235 >gi|145634178|ref|ZP_01789889.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae PittAA] gi|145268622|gb|EDK08615.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae PittAA] Length = 622 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 46/395 (11%), Positives = 111/395 (28%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + I + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLTNSKISKFILGLITVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 AL---LKLQKINGE-------------LEKIAVQELIVETLKKQEIE------------- 91 ++ Q+ L + V +I + L +Q ++ Sbjct: 61 NQEFEIRAQREGEAFMGQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 92 ----KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNSVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 VK D M K + EI + + V+ ++ + Sbjct: 181 VKNSAEIFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 189 DNKLQNQGFV----------------------------QKRIKDAEESRLRLPKDCNKLE 220 + + V ++ K A E + + + Sbjct: 241 ADNISKNLQVTDIEIAQYYQDNKAQFMTQRLAHIQFANEQDAKVAYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ ++L F++ + P + + +++ Sbjct: 301 TKSLDKISGENGGDLGWVNANELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA ++ + +E K+ A Sbjct: 360 QSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394 >gi|29654742|ref|NP_820434.1| hypothetical protein CBU_1451 [Coxiella burnetii RSA 493] gi|29542010|gb|AAO90948.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii RSA 493] Length = 522 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 34/320 (10%), Positives = 83/320 (25%), Gaps = 41/320 (12%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSY-KSWAMSSRIRTTINGEVITDGDIS-- 57 M + + +I L V + F + + Y +S ++ +NGE I++ +++ Sbjct: 1 MLQNIHERVKGWIAGLILAVVSLSFVLWGVQYYLQSEGGKNKTVAKVNGEKISENELNVV 60 Query: 58 -KRIALLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 +R+ + L++ A+Q LI+ + EK G +N Sbjct: 61 FQRLQRAYSLQRGQTLVGAKAEALKEEALQNLIMNHVLLDSAEKMGFNISPAEINQIITV 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 F Q++A + + +P + Sbjct: 121 LPAFQENGKFSPQRFQQFLYENSLTSAQFVAQ--LLQVFLIQQVEKGITGSAFVLPNEIK 178 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + R ++ S +++ + ++ R + Sbjct: 179 NNYELINQARDFRYMIISSAPFLKESKVTPEMIADYYQKHRESFKAPEKLSIAYLLLS-- 236 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + + S + R+ +K + Sbjct: 237 --------------PEMIRQQVSVSDHEIKQ-----------YYESNREGKSFNQVKDQI 271 Query: 289 SAQNTPTKIEKHEAEYVKKL 308 KI + +L Sbjct: 272 KQSLLQQKINTLLTKKSDQL 291 >gi|294341087|emb|CAZ89484.1| putative peptidyl-prolyl cis-trans isomerase [Thiomonas sp. 3As] Length = 226 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 17/178 (9%), Positives = 44/178 (24%), Gaps = 4/178 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 +++ V+++D + Q + + + + Sbjct: 33 DETLLEAVLQHDVHTPEPGVAECERYYAQHADALRQGDMVEADHILFAVTPSTPIDALRH 92 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNT 257 K ++ G L P+F + Sbjct: 93 KAEDTLYALMADSSGFAEMARGLSNCPSAQIGGNLGQLTADQCVPEFWQAFMEHAEPGVL 152 Query: 258 TNPYVTQKGVEYIAI--CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 T+ G+ + I + L A++A ++ + + Y + L +A Sbjct: 153 PRLVRTRFGLHIVRIARIARGQLPPFEAVQAQIAQTLRQQSLVRALQLYAEDLERHAT 210 >gi|228976219|ref|ZP_04136699.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228783511|gb|EEM31610.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] Length = 279 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 43/122 (35%), Gaps = 4/122 (3%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256 +K K+ +E ++++ G+ ++ +F+ K Sbjct: 144 EKTAKEIKEKLNNGEDFAALAKQYSEDPGSKEKGGELPEFGPGEMDSKFEEAAYKLEAGQ 203 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK--IEKHEAEYVKKLRSNAII 314 ++P + G I + +K++L K + + + ++ + ++ K L A I Sbjct: 204 VSDPIKSSHGYHIIKLTEKKELKPFDQEKDNIRKELEQKRSQDQQWQQQFFKDLFKKADI 263 Query: 315 HY 316 Sbjct: 264 KI 265 >gi|145630100|ref|ZP_01785882.1| peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae R3021] gi|144984381|gb|EDJ91804.1| peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae R3021] Length = 622 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 45/395 (11%), Positives = 110/395 (27%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + I + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLTNSKISKFILGLITVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 AL---LKLQKINGE-------------LEKIAVQELIVETLKKQEIE------------- 91 ++ Q+ L + V +I + L +Q ++ Sbjct: 61 NQEFEIRAQREGEAFMGQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 92 ----KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNSVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 VK D M K + EI + + V+ ++ + Sbjct: 181 VKNSAEIFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 189 DNKLQNQGFV----------------------------QKRIKDAEESRLRLPKDCNKLE 220 + + V ++ K E + + + Sbjct: 241 ADNISKNLQVTDIEIAQYYQDNKAQFMTQRLAHIQFANEQDAKVVYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ ++L F++ + P + + +++ Sbjct: 301 TKSLDKISGENGGDLGWVNANELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA ++ + +E K+ A Sbjct: 360 QSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394 >gi|194364618|ref|YP_002027228.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Stenotrophomonas maltophilia R551-3] gi|194347422|gb|ACF50545.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Stenotrophomonas maltophilia R551-3] Length = 651 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 19/194 (9%), Positives = 43/194 (22%), Gaps = 4/194 (2%) Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 D + D Q Q+ + + + + + Sbjct: 222 PADTAPVTDAQIKQWYDSHGKDFRQAESVSLEYVEINGGNLPAPTAADEATLRKRYEDEK 281 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQ 235 L G K K A E++ + + G Sbjct: 282 AKFTSPEQRQASHILLTGDGAEAKANKIAAEAKAAGADFAALAKANSEDPGSKEQGGDLG 341 Query: 236 YLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 ++ + F++ + P T G I + R G+ + Sbjct: 342 WVERGAMVKPFEDALFAAKAGDVIGPVKTDFGYHIIKVAAVRGGEGKS--FEEVRDTLAA 399 Query: 295 TKIEKHEAEYVKKL 308 +++ +L Sbjct: 400 EQLKADGERGFNEL 413 Score = 50.4 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 29/303 (9%), Positives = 79/303 (26%), Gaps = 40/303 (13%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-------------- 46 M K+ S +I + ++I F V SY + + Sbjct: 1 MLQKLRDKTSGWIVTVILGLLMIPFLFVIDNSYLGGVGAQN-VAKVSAPPTWWRSAPSWW 59 Query: 47 ------NGEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++++ + E + +LI E + + Sbjct: 60 PVRMLWQHHEISAQDFRTRFEQERMRERQQQGENFDPRAFESNESKMAVLDQLIDEQVVR 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E++G+ V + + F + + + ++ Sbjct: 120 LVGEQAGVVIGDGAVREYITTIPAF----LDSNGKFNENNYRLALAGGNPPRTPTQFQEL 175 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 V+ ++ + + + + L T + ++ Sbjct: 176 VRESLQQSVIPSGLQNSGFVTQAETERLLKLLGETRDVELAALPEVPADTAPVTDAQIKQ 235 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 KD + E + + +++ G +D + + T+ ++ Sbjct: 236 WYDSHGKDFRQAESVSLEYVEINGGNLPAPTAADEATLRKRYEDEKAKFTSP--EQRQAS 293 Query: 268 EYI 270 + Sbjct: 294 HIL 296 >gi|319793857|ref|YP_004155497.1| ppic-type peptidyL-prolyl cis-trans isomerase [Variovorax paradoxus EPS] gi|315596320|gb|ADU37386.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Variovorax paradoxus EPS] Length = 261 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 87/291 (29%), Gaps = 48/291 (16%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKK 87 ++ A ++ +NG+ + + L E++ +E++ + Sbjct: 14 LIGAIPMAALAQNAAIVNGKPVPKARMDVLAQQLAAAGRPVTPEMQSQLREEIVAREVFM 73 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 QE +K G+ + + N + + + Sbjct: 74 QEAQKQGLDANDDYKNQL------------------------------ELARQAILIRAL 103 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 N + + + +EY R +L + + K Sbjct: 104 FDNYRKTNPVSDADVKAEYDKFVAANGGKEYKARHIL-----------VETEDQAKKIMA 152 Query: 208 SRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQ 264 + K + +K + + G + + P+F + ++K + TT P TQ Sbjct: 153 DLKKGAKFEDIAKKQSKDPGSGANGGDLDWANPASFVPEFSEAMIKLKKGETTPAPIKTQ 212 Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 G I + D R + Q T ++ +Y ++LR+ A + Sbjct: 213 FGYHIIRVDDIRQAQL--PKLEEVKPQVTQQLQQQRLQKYQEELRAKAKVE 261 >gi|212219179|ref|YP_002305966.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuK_Q154] gi|212013441|gb|ACJ20821.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuK_Q154] Length = 522 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 34/320 (10%), Positives = 82/320 (25%), Gaps = 41/320 (12%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSY-KSWAMSSRIRTTINGEVITDGDIS-- 57 M + + +I L V + F + + Y +S ++ +NGE I++ +++ Sbjct: 1 MLQNIHERVKGWIAGLILAVVSLSFVLWGVQYYLQSEGGKNKTVAKVNGEKISENELNVV 60 Query: 58 -KRIALLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 +R+ + L++ A+Q LI+ + EK G +N Sbjct: 61 FQRLQRAYSLQRGQTLVGAKAEALKEEALQNLIMNHVLLDSAEKMGFNISPAEINQIITV 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 F Q++A + + +P + Sbjct: 121 LPAFQENGKFSPQRFQQFLYENSLTSAQFVAQ--LLQVFLIQQVEKGITGSAFVLPNEIK 178 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + R ++ S +++ + ++ R + Sbjct: 179 NNYELINQARDFRYMIISSAPFLKESKVTPEMIADYYQKHRESFKAPEKLSIAYLLLS-- 236 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + S + R+ +K + Sbjct: 237 --------------PEMILQQVSVSDHEIKQ-----------YYESNREGKSFNQVKDQI 271 Query: 289 SAQNTPTKIEKHEAEYVKKL 308 KI + +L Sbjct: 272 KQSLLQQKINTLLTKKSDQL 291 >gi|301164816|emb|CBW24376.1| putative exported isomerase [Bacteroides fragilis 638R] Length = 517 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 33/297 (11%), Positives = 75/297 (25%), Gaps = 41/297 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + V + C+ + A + ING+ IT + + Sbjct: 1 MKKILVGTLTCLFG--AIAGHAQQDPVLMRINGQDITRSEFER----------------- 41 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + + R L + Q G + Sbjct: 42 ------------------FCHRNKPSGIAGKETLKRCADLFVDMKLKLSAAQKAGLDTVS 83 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + ++ E +MK + + +F Sbjct: 84 DFRTEMENYYRALSRSYLTDSATDEAYAKKLYDQMKTRSAAGEVKVMRIFRYLPQTALPH 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG-KAQYLLESDLHPQFQNLLKKSQ 254 + +I + +K D +L S + Sbjct: 144 HLREAQILMDSLYHVLETHPDIDFRTLVNKYSDDKKEFWMGWLQTSQ--EFEEVAFSLKD 201 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRS 310 + P+ T KG++ I + +R++ ++ L + + +K +V KL+S Sbjct: 202 GEYSKPFFTPKGIQIIKVTGRREIPPFEQIRGELIHKLSRRPGTDKEIELWVNKLKS 258 >gi|16804258|ref|NP_465743.1| hypothetical protein lmo2219 [Listeria monocytogenes EGD-e] gi|224500981|ref|ZP_03669288.1| hypothetical protein LmonFR_00430 [Listeria monocytogenes FSL R2-561] gi|46396978|sp|Q8Y557|PRSA2_LISMO RecName: Full=Foldase protein prsA 2; Flags: Precursor gi|16411689|emb|CAD00297.1| lmo2219 [Listeria monocytogenes EGD-e] Length = 293 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 29/304 (9%), Positives = 84/304 (27%), Gaps = 40/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + ++ + S + + T + +T ++ + + Sbjct: 1 MKKKLILGLVMMMALFSLAACGGGGDVVKT-DSGDVTKDELYDAMK--------DKYGSE 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 VQ+L E + + + S D + + + Sbjct: 52 FVQQLTFEKILGDKYKVSDEDVD------------KKFNEYKSQYGDQFSAVLTQSGLTE 99 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + +V+ + + + + Sbjct: 100 KSFKSQLKYNLLVQKATEANTDTSDKTLKKYYET---------------WQPDITVSHIL 144 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--K 252 + + K+ E+ K + +++++ + G+ + P F+ K Sbjct: 145 VADENKAKEVEQKLKDGEKFADLAKEYSTDTATKDNGGQLAPFGPGKMDPAFEKAAYALK 204 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKKLRSN 311 ++ + + P TQ G I + K + A ++ + +KK + Sbjct: 205 NKGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKKEYKD 264 Query: 312 AIIH 315 A + Sbjct: 265 ANVK 268 >gi|145637308|ref|ZP_01792969.1| peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae PittHH] gi|145269560|gb|EDK09502.1| peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae PittHH] Length = 622 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 44/383 (11%), Positives = 109/383 (28%), Gaps = 84/383 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + I + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLTNSKISKFILGLIAVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 AL---LKLQKINGE-------------LEKIAVQELIVETLKKQEIE------------- 91 ++ Q+ L + + +I + L +Q ++ Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIINLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 92 ----KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 VK D M K + EI + + V+ ++ + Sbjct: 181 VKNSAEIFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 189 DNKLQNQGFV----------------------------QKRIKDAEESRLRLPKDCNKLE 220 + + V ++ K A E + + + Sbjct: 241 ADNISRNLQVTDVEIAQYYQDNKAQFMTQRLAHIQFANEQDAKVAYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ E++L F++ + P + + +++ Sbjct: 301 TKSLDKISGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHE 301 +KA ++ + +E Sbjct: 360 QSLENVKAQIADLVRKSLMESRY 382 >gi|154706549|ref|YP_001423952.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii Dugway 5J108-111] gi|154355835|gb|ABS77297.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii Dugway 5J108-111] Length = 522 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 34/320 (10%), Positives = 83/320 (25%), Gaps = 41/320 (12%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSY-KSWAMSSRIRTTINGEVITDGDIS-- 57 M + + +I L V + F + + Y +S ++ +NGE I++ +++ Sbjct: 1 MLQNIHERVKGWIAGLILAVVSLSFVLWGVQYYLQSEGGKNKTVAKVNGEKISENELNVV 60 Query: 58 -KRIALLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 +R+ + L++ A+Q LI+ + EK G +N Sbjct: 61 FQRLQRAYSLQRGQTLVGAKAEALKEEALQNLIMNHVLLDSAEKMGFNISPAEINQIITV 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 F Q++A + + +P + Sbjct: 121 LPAFQENGKFSPQRFQQFLYENSLMSAQFVAQ--LLQVFLIQQVEKGITGSAFVLPNEIK 178 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + R ++ S +++ + ++ R + Sbjct: 179 NNYELINQARDFRYMIISSAPFLKESKVTPEMIADYYQKHRESFKAPEKLSIAYLLLS-- 236 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + + S + R+ +K + Sbjct: 237 --------------PEMIRQQVSVSDHEIKQ-----------YYESNREGKSFNQVKDQI 271 Query: 289 SAQNTPTKIEKHEAEYVKKL 308 KI + +L Sbjct: 272 KQSLLQQKINTLLTKKSDQL 291 >gi|251794076|ref|YP_003008807.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. JDR-2] gi|247541702|gb|ACS98720.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. JDR-2] Length = 368 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 40/316 (12%), Positives = 91/316 (28%), Gaps = 28/316 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVS-----------YKSWAMSSRIRTTINGE 49 M S LL VL++ + + A + T Sbjct: 1 MLHTKRKSTWRRSALLVIAAVLVMTIMAACGGKKENEGGSTGLTFAGAGKGTVVATYKDG 60 Query: 50 VITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 +T+ + +K + + + + + ++ +Q+ + + ++ ++ + + Sbjct: 61 TVTEAEFNKYLDIFNIMQPGYEQVIAIPQFKEQLLQQFVSYKILAKQATEATLKKADDET 120 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 N +A+ + DK+ + VV K + EM+ Sbjct: 121 NDQMKSFEDTLKTNADVKKTLDDKKVSTA-----DVRTYLNLMLVVVEHMNSKVTDDEMK 175 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKL--QNQGFVQKRIKDAEESRLRLPKDCNKLE 220 K V I D+ + + R K+A+ + Sbjct: 176 AEYEKNIGNYNPVTVRHILVATTDPADSTKTLRTKEEALARAKEAKAKLDAGGDWTALAK 235 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDL 278 +++ S G+ + SD F+N +P T+ G I + +KRD Sbjct: 236 EYSDDTGSKDSGGEYKDAKASDWVEGFKNAALTQPVGKIGDPVETEYGYHVI-LVEKRDQ 294 Query: 279 GGEIALKAYLSAQNTP 294 + + Sbjct: 295 VTYDKITDEQKQEVQS 310 >gi|172065726|ref|YP_001816438.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria MC40-6] gi|171997968|gb|ACB68885.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria MC40-6] Length = 262 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 20/181 (11%), Positives = 52/181 (28%), Gaps = 5/181 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + +++ + + + R ++ ++ Sbjct: 69 DDATVDALLERELTHMPEPERADCERYYAQHPARFRRNDIVYASHVLFAVTDRVPLAPLR 128 Query: 200 KRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NN 256 +R + A + P + ++ G LL D P+F+ L + Sbjct: 129 QRAERALADVVAAPDTFEAVARESSNCPSAQVGGSLGQLLRGDTVPEFEAALFDTDGLGV 188 Query: 257 TTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T+ G + I + D+ ++A + ++ +YV L + A + Sbjct: 189 LPKLVNTRFGFHIVRIERRVPGDIVPFDEAAGQIAAYLSERVRQRAMRQYVAILAAAARV 248 Query: 315 H 315 Sbjct: 249 E 249 >gi|237714321|ref|ZP_04544802.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D1] gi|262408154|ref|ZP_06084701.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294645120|ref|ZP_06722845.1| PPIC-type PPIASE domain protein [Bacteroides ovatus SD CC 2a] gi|294809728|ref|ZP_06768415.1| PPIC-type PPIASE domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229445485|gb|EEO51276.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D1] gi|262353706|gb|EEZ02799.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292639544|gb|EFF57837.1| PPIC-type PPIASE domain protein [Bacteroides ovatus SD CC 2a] gi|294443062|gb|EFG11842.1| PPIC-type PPIASE domain protein [Bacteroides xylanisolvens SD CC 1b] gi|295088067|emb|CBK69590.1| Parvulin-like peptidyl-prolyl isomerase [Bacteroides xylanisolvens XB1A] Length = 460 Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 28/280 (10%), Positives = 83/280 (29%), Gaps = 13/280 (4%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQ 66 + F+ L++ + +Y + + + E I D+ + AL + Sbjct: 1 MKKFVN-FRFVVTLVLAIFANVATYAQDNVVDEVVWVVGDEAILKSDVEEARMDALYNGR 59 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 + +G+ + +E+ V+ L + + I + + Sbjct: 60 RFDGDPYCVIPEEIAVQKLFLHQAKLDSIEVSEAEIIQRVDMMTNMYIQQIGSREKMEEY 119 Query: 127 QGIGDNHFKQYLAIQS---IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 ++ L + + ++ + + E+ + + ++ + Sbjct: 120 FNKTSTQIRETLRDNARDGLTVQKMQQKLVGEIKVTPAEVRRYFKDLPQDSIPYIPTQVE 179 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLL 238 + I ++ K + R+ K A K + G+ ++ Sbjct: 180 VQIITLQPKIPISEIEDVKKTLRDYTDRVTKGEIDFSTLARLYSEDKASAIKGGECGFMG 239 Query: 239 ESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKR 276 + P + N+ + + ++ G I + +KR Sbjct: 240 RGMMDPAYANVAFSLQDPKKVSKIVESEFGFHIIQLIEKR 279 >gi|328551773|gb|AEB22265.1| hypothetical protein BAMTA208_00365 [Bacillus amyloliquefaciens TA208] gi|328910033|gb|AEB61629.1| putative protein secretion PrsA [Bacillus amyloliquefaciens LL3] Length = 296 Score = 69.7 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 36/315 (11%), Positives = 94/315 (29%), Gaps = 36/315 (11%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI-RTTINGEVITDGDISKRIALLKLQKI 68 + ++ ++ + ++ A SS TI + IT D K++ Sbjct: 4 RTLLTIIVAALLVCSVAVAYKLTKSQAAGSSEESIATIGDKHITRQDWMKKM-------- 55 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 E K ++++I + ++ +K+ +T ++ + F+ ED Sbjct: 56 EDEYGKSTLEDMINTQVVEELAKKNKLTVSNSELEREFLLIKAVNNSFYEDSHITEK--- 112 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 Q + +++ + E+ + K K + + R + Sbjct: 113 --------EWKDQIRYNILLEELLTKDIDISDKEMQSFYNKNKELYQFDDSYRIRHIVVK 164 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD---LHPQ 245 + ++ + + + E+ + G ++ E+ Sbjct: 165 SKEEADRVLA--------DLKGGSSFEAVAAERSTDRYTSQYGGDLGFVTENQENIPPAY 216 Query: 246 FQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEA 302 +N + P G I + +K +K+ + Q ++ Sbjct: 217 ITEAKNLKENEWSAEPIKVSSGYAVIQLKEKLKARTFSYNEVKSQIRRQIAMDQLGDKAT 276 Query: 303 EYVKKLRSNAIIHYY 317 VK L A + ++ Sbjct: 277 --VKTLWKEAGVSWF 289 >gi|308171963|ref|YP_003918668.1| protein secretion PrsA-like protein [Bacillus amyloliquefaciens DSM 7] gi|307604827|emb|CBI41198.1| putative protein secretion PrsA homolog [Bacillus amyloliquefaciens DSM 7] Length = 296 Score = 69.7 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 36/315 (11%), Positives = 94/315 (29%), Gaps = 36/315 (11%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI-RTTINGEVITDGDISKRIALLKLQKI 68 + ++ ++ + ++ A SS TI + IT D K++ Sbjct: 4 RTLLTIIVAALLVCSVAVAYKLTKSQAAGSSEESIATIGDKHITRQDWMKKM-------- 55 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 E K ++++I + ++ +K+ +T ++ + F+ ED Sbjct: 56 EDEYGKSTLEDMINTQVVEKLAKKNKLTVSNSELEREFLLIKAVNNSFYEDSHITEK--- 112 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 Q + +++ + E+ + K K + + R + Sbjct: 113 --------EWKDQIRYNILLEELLTKDIDISDKEMQSFYNKNKELYQFDDSYRIRHIVVK 164 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD---LHPQ 245 + ++ + + + E+ + G ++ E+ Sbjct: 165 SKEEADRVLA--------DLKGGSSFEAVAAERSTDRYTSQYGGDLGFVTENQENIPPAY 216 Query: 246 FQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEA 302 +N + P G I + +K +K+ + Q ++ Sbjct: 217 ITEAKNLKENEWSAEPIKVSSGYAVIQLKEKLKARTFSYNEVKSQIRRQIAMDQLGDKAT 276 Query: 303 EYVKKLRSNAIIHYY 317 VK L A + ++ Sbjct: 277 --VKTLWKEAGVSWF 289 >gi|329120541|ref|ZP_08249205.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Neisseria bacilliformis ATCC BAA-1200] gi|327461280|gb|EGF07612.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Neisseria bacilliformis ATCC BAA-1200] Length = 290 Score = 69.7 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 29/291 (9%), Positives = 83/291 (28%), Gaps = 11/291 (3%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET 84 +++ S +++++ T+NG I ++ + + L+ Q EL+ + Sbjct: 6 LVQALVLAVLSGSLAAQTLVTVNGSKIDSSEVDRYVKALRAQNPQVPDSPEIRSELLGDI 65 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 + + + + + + + + + G + + + Sbjct: 66 VTRTIVVQEARRLKLDQGKE----YKAAIENARKAAQKEGADKKPGFKQQWEDYQNELLN 121 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 V + + + ++ + + + + + K K Sbjct: 122 QAFVAHIVRTQPVSDAEARKNYEEMQNFYKGSSEVQIGEILTQKKDDAEKAIKDLKANKP 181 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT-TNPYVT 263 E+ + D + + E+ P + + + T P Sbjct: 182 FVETARKYSADPQVKQTGGINKEYDPLKDL----EAAAPPVYNAVKDLKKGQFTTTPVEG 237 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I DKR +I + A T + +++ + + L A I Sbjct: 238 NGAYGVFYINDKR--SVQIPAFEQIKANITRSLMQQKVNQAISSLTEKATI 286 >gi|91790420|ref|YP_551372.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas sp. JS666] gi|91699645|gb|ABE46474.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas sp. JS666] Length = 289 Score = 69.7 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 58/184 (31%), Gaps = 15/184 (8%) Query: 147 VVKNDFMLKYG---NLEMEIPANKQKMKNIT--VREYLIRTVLF--SIPDNKLQNQGFVQ 199 V++ + E E + K + +R +LF + N + Sbjct: 93 VIETMVDREVTTPQPTEEEGRRYYEAHKPQFVVGQALHVRHILFAVTPGVNVQALTVHAE 152 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 + + + +R + + ++ G ++ D P+ L Q+ T Sbjct: 153 RALLELSHKGVRPERFAQLAAELSNCPSSAQGGDLGWIGPDDCAPELATELFHLQHAQTG 212 Query: 260 ------PYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + T+ G I + ++R ++ ++A T + +Y+ L Sbjct: 213 TGVHPRLFHTRFGFHIIDVLERRSGRQPAYEEVRERIAALLTMQSRARALHQYMCLLVGE 272 Query: 312 AIIH 315 A + Sbjct: 273 AEVE 276 >gi|298480175|ref|ZP_06998373.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp. D22] gi|298273456|gb|EFI15019.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp. D22] Length = 460 Score = 69.7 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 28/280 (10%), Positives = 83/280 (29%), Gaps = 13/280 (4%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQ 66 + F+ L++ + +Y + + + E I D+ + AL + Sbjct: 1 MKKFVN-FRFVVTLVLAIFANVATYAQDNVVDEVVWVVGDEAILKSDVEEARMDALYNGR 59 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 + +G+ + +E+ V+ L + + I + + Sbjct: 60 RFDGDPYCVIPEEIAVQKLFLHQAKLDSIEVSEAEIIQRVDMMTNMYIQQIGSREKMEEY 119 Query: 127 QGIGDNHFKQYLAIQS---IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 ++ L + + ++ + + E+ + + ++ + Sbjct: 120 FNKTSTQIRETLRDNARDGLTVQKMQQKLVGEIKVTPAEVRRYFKDLPQDSIPYIPTQVE 179 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLL 238 + I ++ K + R+ K A K + G+ ++ Sbjct: 180 VQIITLQPKIPISEIEDVKKTLRDYTDRVTKGEIDFSTLARLYSEDKASAIKGGECGFMG 239 Query: 239 ESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKR 276 + P + N+ + + ++ G I + +KR Sbjct: 240 RGMMDPAYANVAFSLQDPKKVSKIVESEFGFHIIQLIEKR 279 >gi|326330421|ref|ZP_08196729.1| LigA [Nocardioidaceae bacterium Broad-1] gi|325951696|gb|EGD43728.1| LigA [Nocardioidaceae bacterium Broad-1] Length = 345 Score = 69.7 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 28/291 (9%), Positives = 62/291 (21%), Gaps = 21/291 (7%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGEL----------EKIAVQELIVETLKKQE 89 +G V+T D+ +R+ +L E A + L Sbjct: 42 DDAAFEYDGTVVTRDDLDERVEVLGALYGIKEPGKKDGRAAFRRDTAKAVAVSMVLDDAA 101 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 +K D + A G + + L + ++ Sbjct: 102 RDKGVAVSDKRARDTLDQMVASQLGTDPREAFTELLADFGVTEAAVLDEVKRQQAVALLF 161 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 A + L +I ++ V +R Sbjct: 162 EKITKDAVADVTAADARDYYEAHPDRFMTPEGRELRNIVVRTDKDAQAVVQR-------A 214 Query: 210 LRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGV 267 + + G + S L + + P TQ G Sbjct: 215 RKGEDFAALARANSLDDATRDQGGALGVVPASSLAGDYAKAAFGARSGAVFGPVRTQFGW 274 Query: 268 EYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++ + + ++++ A + Y Sbjct: 275 NVGQVVRIVPGKEPTFDQVEDQALDVVRSERALETWRDWLEGRIKKADVEY 325 >gi|189463690|ref|ZP_03012475.1| hypothetical protein BACINT_00021 [Bacteroides intestinalis DSM 17393] gi|189438640|gb|EDV07625.1| hypothetical protein BACINT_00021 [Bacteroides intestinalis DSM 17393] Length = 528 Score = 69.7 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 30/316 (9%), Positives = 79/316 (25%), Gaps = 45/316 (14%) Query: 1 MTSKVFTSL-SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR 59 M S+ + L I ++ + +I C+ +A + ING+ I + Sbjct: 1 MFSRYYIVLFQKKIVMIRSGLTIIFLCL----GLTVFAQQDPMLMRINGKDILRSEFEYI 56 Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 +E+ + E + + N L Sbjct: 57 YN---KNNALSGIEQKTLNEYVDLFV--------------------------NFKLKVAA 87 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + + Q + + Q+ + V Sbjct: 88 AEAMGLDTTRAFREELEGYRRQLAKTYLTDETVSELAARQIYDKMKANQRAGQVRVSHIF 147 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + + + + + ++ Sbjct: 148 KSLPQTATSHLLRTTETRMDSLYTALQNGQADFDACVRNFSDEKKSF---------WVSW 198 Query: 240 SDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKI 297 + +F++ K + P+ T +G+ + + +++D+ +K + Q + Sbjct: 199 LQMPAEFEDTVFKMKPGEISRPFFTPQGIHIVKVLERKDILPFEDVKDEIIRRQTRRHGM 258 Query: 298 EKHEAEYVKKLRSNAI 313 +K V+KL+ Sbjct: 259 DKGTESLVEKLKKEYQ 274 >gi|296136914|ref|YP_003644156.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomonas intermedia K12] gi|295797036|gb|ADG31826.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomonas intermedia K12] Length = 226 Score = 69.3 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 17/178 (9%), Positives = 44/178 (24%), Gaps = 4/178 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 +++ V+++D + Q + + + + Sbjct: 33 DETLLEAVLQHDVQTPEPGVAECERYYAQHADALRQGDMVEADHILFAVTPSTPIDALRH 92 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNT 257 K ++ G L P+F + Sbjct: 93 KAEDTLYALMADSSGFAEMARGLSNCPSAQIGGNLGQLTADQCVPEFWQALMEHAEPGVL 152 Query: 258 TNPYVTQKGVEYIAI--CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 T+ G+ + I + L A++A ++ + + Y + L +A Sbjct: 153 PRLVRTRFGLHIVRIARIARGQLPPFEAVQAQIAQTLRQQSLVRALQLYAEDLEQHAT 210 >gi|223934638|ref|ZP_03626558.1| PpiC-type peptidyl-prolyl cis-trans isomerase [bacterium Ellin514] gi|223896593|gb|EEF63034.1| PpiC-type peptidyl-prolyl cis-trans isomerase [bacterium Ellin514] Length = 325 Score = 69.3 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 33/280 (11%), Positives = 73/280 (26%), Gaps = 28/280 (10%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 + + + + G IT D+ + + LQ A+ EL+ + K E +G+ Sbjct: 55 SPGNTVVGVVQGVNITKDDL---LKDMWLQNAP-----AALDELLRQRAVKCAAESAGVK 106 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 ++ + + + + + L H+++ + ++ M Sbjct: 107 ITTDDFQAKANEDIKR--THSSNLNEMLQHHNTTPAHYQRICEGNMLLEAYIRQSIMT-- 162 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 I A Y+ SIP K Q +K+ Sbjct: 163 ------IDAKDYADWVKVRYIYIADAGYNSIPAKKEQTSIETKKKADQILTKIRNGTDFA 216 Query: 217 NKLEKFASKIHD-----VSIGKAQYLLESDL---HPQFQNLLKKSQNNTTNPYVTQKGVE 268 ++F + G + S + K Q + P + G Sbjct: 217 KLADEFTDSPENVVDGKKQGGYMGWRARSWTQFTPAFEAAVFKLKQGEVSEPIRSDFGYY 276 Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + L K+ ++ + Sbjct: 277 LAKVEA--TGLEVKDKDPELKKLIADGKVRPLIDSTLENI 314 >gi|153209250|ref|ZP_01947306.1| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177'] gi|120575458|gb|EAX32082.1| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177'] Length = 522 Score = 69.3 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 34/320 (10%), Positives = 82/320 (25%), Gaps = 41/320 (12%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSY-KSWAMSSRIRTTINGEVITDGDIS-- 57 M + + +I L V + F + + Y +S ++ +NGE I++ +++ Sbjct: 1 MLQNIHERVKGWIAGLILAVVSLSFVLWGVQYYLQSEGGKNKTVAKVNGEKISENELNVV 60 Query: 58 -KRIALLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 +R+ + L++ A+Q LI+ + EK G +N Sbjct: 61 FQRLQRAYSLQRGQTLVGAKAEALKEEALQNLIMNHVLLDSAEKMGFNISPAEINQIITV 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 F Q++A + + +P + Sbjct: 121 LPAFQENGKFSPQRFQQFLYENSLTSAQFVAQ--LLQVFLIQQVEKGITGSAFVLPNEIK 178 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + R ++ S +++ + ++ R + Sbjct: 179 NNYELINQARDFRYMIISSAPFLKESKVTPEMIADYYQKHRESFKAPEKLSIAYLLLS-- 236 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + S + R+ +K + Sbjct: 237 --------------PEMILQQVSVSDHEIKQ-----------YYESNREGKSFNQVKDQI 271 Query: 289 SAQNTPTKIEKHEAEYVKKL 308 KI + +L Sbjct: 272 KQSLLQQKINTLLTKKSDQL 291 >gi|47097568|ref|ZP_00235100.1| protein export protein [Listeria monocytogenes str. 1/2a F6854] gi|224498964|ref|ZP_03667313.1| hypothetical protein LmonF1_04383 [Listeria monocytogenes Finland 1988] gi|254826892|ref|ZP_05231579.1| export protein [Listeria monocytogenes FSL N3-165] gi|254831344|ref|ZP_05235999.1| hypothetical protein Lmon1_08297 [Listeria monocytogenes 10403S] gi|254899079|ref|ZP_05259003.1| hypothetical protein LmonJ_04684 [Listeria monocytogenes J0161] gi|254912780|ref|ZP_05262792.1| protein export protein [Listeria monocytogenes J2818] gi|254937107|ref|ZP_05268804.1| export protein [Listeria monocytogenes F6900] gi|255025820|ref|ZP_05297806.1| hypothetical protein LmonocytFSL_04835 [Listeria monocytogenes FSL J2-003] gi|284802666|ref|YP_003414531.1| hypothetical protein LM5578_2422 [Listeria monocytogenes 08-5578] gi|284995808|ref|YP_003417576.1| hypothetical protein LM5923_2373 [Listeria monocytogenes 08-5923] gi|47014054|gb|EAL05055.1| protein export protein [Listeria monocytogenes str. 1/2a F6854] gi|258599272|gb|EEW12597.1| export protein [Listeria monocytogenes FSL N3-165] gi|258609709|gb|EEW22317.1| export protein [Listeria monocytogenes F6900] gi|284058228|gb|ADB69169.1| hypothetical protein LM5578_2422 [Listeria monocytogenes 08-5578] gi|284061275|gb|ADB72214.1| hypothetical protein LM5923_2373 [Listeria monocytogenes 08-5923] gi|293590774|gb|EFF99108.1| protein export protein [Listeria monocytogenes J2818] Length = 293 Score = 69.3 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 29/304 (9%), Positives = 84/304 (27%), Gaps = 40/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + ++ + S + + T + +T ++ + + Sbjct: 1 MKKKLILGLVMMMALFSLAACGGGGDVVKT-DSGDVTKDELYDAMK--------DKYGSE 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 VQ+L E + + + S D + + + Sbjct: 52 FVQQLTFEKILGDKYKVSDEDVD------------KKFNEYKSQYGDQFSAVLAQSGLTE 99 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + +V+ + + + + Sbjct: 100 KSFKSQLKYNLLVQKATEANTDTSDKTLKKYYET---------------WQPDITVSHIL 144 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--K 252 + + K+ E+ K + +++++ + G+ + P F+ K Sbjct: 145 VADENKAKEVEQKLKDGEKFADLAKEYSTDTATKDNGGQLAPFGPGKMDPAFEKAAYALK 204 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKKLRSN 311 ++ + + P TQ G I + K + A ++ + +KK + Sbjct: 205 NKGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKKEYKD 264 Query: 312 AIIH 315 A + Sbjct: 265 ANVK 268 >gi|319943847|ref|ZP_08018128.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lautropia mirabilis ATCC 51599] gi|319743080|gb|EFV95486.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lautropia mirabilis ATCC 51599] Length = 649 Score = 69.3 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 21/166 (12%), Positives = 42/166 (25%), Gaps = 8/166 (4%) Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 E E+ A QK +N + + + + +K AE Sbjct: 242 MLPKDVEPSEKELEAYYQKHRNQFNEAEERQASHILLKVPEGADAAAKEKVKARAEALLA 301 Query: 211 RLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKKSQN-NTTNPYVTQ 264 +K + A K G + + F + T+ T+ Sbjct: 302 EAKAHPDKFAELAKKNSEDPGSAEQGGDLGFFERDTMVKPFADAAFGLDKPGFTDVVETE 361 Query: 265 KGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 G I + + +K L + + + + L Sbjct: 362 YGFHVIQVTGVKGGGEKPLAEVKPQLVKMWREEEAARRYNQAAEAL 407 Score = 43.5 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 27/285 (9%), Positives = 71/285 (24%), Gaps = 21/285 (7%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-------------AL 62 L ++ F I Y +++GE + + Sbjct: 15 LLLVLIMPAFVFFGISGYDRMFGDGDSVASVDGEPVPRAYFEQTYRQQVQQMQQMMGDNY 74 Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 N ++ LI + ++ IT + + + + F Sbjct: 75 DAAVFDNQATRMEVLENLITRQALLADARRARITVTPGEIQKAILDQHADLRDANGKFDI 134 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 K+ + N + + + M + ++RT Sbjct: 135 EGYKRLLAANGLTPAQYEAQMGQMLAVGAVERAVADSAMVPQTVVDGVFASQENRRVVRT 194 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 +L + D + ++ + + I V++ + L + Sbjct: 195 LLVTPRDYEKGLAPTDEQLKAYYDAHASAFDLPE------SVDISYVALRRTDMLPKDVE 248 Query: 243 H--PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 + + +K +N Q + + + D + +K Sbjct: 249 PSEKELEAYYQKHRNQFNEAEERQASHILLKVPEGADAAAKEKVK 293 >gi|296125998|ref|YP_003633250.1| SurA domain protein [Brachyspira murdochii DSM 12563] gi|296017814|gb|ADG71051.1| SurA domain protein [Brachyspira murdochii DSM 12563] Length = 317 Score = 69.3 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 35/295 (11%), Positives = 85/295 (28%), Gaps = 20/295 (6%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKI---NGELEKIAVQELIVETLKKQEIEKSGIT 96 + I + IT D R + L LQ + + ++L+ E + ++++ Sbjct: 25 NSIVGIVGSMPITYEDFISRKSFLTLQAKSIGQKINDDMVYKDLVEERIMYLKLKEYNYV 84 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 + N V+ A+ ++ + F+ L +GI ++ + Q ++ + Sbjct: 85 IEENDVSRRLENIAKQYNMTLDQFAKQLMAEGISYEEYRNSIRKQIAMENL-NGLVVNNT 143 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI--KDAEESRLRLPK 214 + E K+ + E L I +K+ K R Sbjct: 144 EITDEEADEFYNNTKDKSAFEVDTLVQLSWIFFKAATFTEKGEKQELAKQVRGMAARGQD 203 Query: 215 DCNKLEKFASK-IHDVSIGKAQYL-----LESDLHPQFQ-----NLLKKSQNNTTNPYV- 262 K++ + G Y + L Q ++ Sbjct: 204 FAELARKYSDDNATKNNGGDLGYNLLYDAGKRSLPAQINAGLNLAKRGYKVGTVSSVREL 263 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 KG + I +++ + ++ +++ + + Y Sbjct: 264 VGKGFYIVKIVGIE--KDMESIRTRVKNYLGEMQMRDSFVKWLDEETKRVSVQLY 316 >gi|217963619|ref|YP_002349297.1| foldase protein PrsA [Listeria monocytogenes HCC23] gi|217332889|gb|ACK38683.1| foldase protein PrsA [Listeria monocytogenes HCC23] Length = 293 Score = 69.3 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 29/304 (9%), Positives = 84/304 (27%), Gaps = 40/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + ++ + S + + T + +T ++ + + Sbjct: 1 MKKKLILGLVMVMALFSLAACGGGGDVVKT-DSGDVTKDELYDAMK--------DKYGSE 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 VQ+L E + + + S D + + + Sbjct: 52 FVQQLTFEKILGDKYKVSDEDVD------------KKFNEYKSQYGDQFSAVLAQSGLTE 99 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + +V+ + + + + Sbjct: 100 KSFKSQLKYNLLVQKATEANTDTSDKVLKKYYET---------------WQPDITVSHIL 144 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--K 252 + + K+ E+ K + +++++ + G+ + P F+ K Sbjct: 145 VADENKAKEVEQKLKDGAKFADLAKEYSTDTATKENGGQLAPFGPGKMDPAFEKAAYALK 204 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKKLRSN 311 ++ + + P TQ G I + K + A ++ + +KK + Sbjct: 205 NKGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKKEYKD 264 Query: 312 AIIH 315 A + Sbjct: 265 ANVK 268 >gi|190573026|ref|YP_001970871.1| putative peptidyl-prolyl cis-trans isomerase [Stenotrophomonas maltophilia K279a] gi|190010948|emb|CAQ44557.1| putative peptidyl-prolyl cis-trans isomerase [Stenotrophomonas maltophilia K279a] Length = 651 Score = 69.3 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 18/194 (9%), Positives = 44/194 (22%), Gaps = 4/194 (2%) Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 D + D Q Q+ + + + + + Sbjct: 222 PADTAPVTDAQIKQWYDSHGKDFRQAESVSLEYVEINGANLPAPTAADEATLRKRYEDEK 281 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQ 235 + G K K A E++ + + G Sbjct: 282 AKFTTPEQRQASHILITGDGAEAKANKIAAEAKAAGADFAALAKANSEDPGSKGQGGDLG 341 Query: 236 YLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 ++ + F++ + P T+ G I + R G+ + Sbjct: 342 WVERGAMVKPFEDALFAAKAGDVIGPVKTEFGYHIIKVAAVRGGQGKS--FEEVRDTLAA 399 Query: 295 TKIEKHEAEYVKKL 308 +++ +L Sbjct: 400 EQLKADGERGFNEL 413 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 29/303 (9%), Positives = 77/303 (25%), Gaps = 40/303 (13%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-------------- 46 M K+ S +I + ++I F V SY + + Sbjct: 1 MLQKLRDKTSGWIVTVILGLLMIPFLFVIDNSYLGGVGAQN-VAKVSAPPTWWRSAPSWW 59 Query: 47 ------NGEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKK 87 I+ D R ++++ + E + +LI E + + Sbjct: 60 PVRMLWQHHEISAQDFRTRFEQERMRERQQQGENFDPRAFESTENKLAVLDQLIDEQVVR 119 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E++G+ V + + F + + + ++ Sbjct: 120 LVGEQAGVVIGDGAVREYIATIPAF----LDSNGKFNENNYRLALAGGNPPRTPTQFQEL 175 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 V+ ++ + + + + L T + ++ Sbjct: 176 VRESLQQSVIPSGLQNSGFVTQSETERLLKLLGETRDVELAALPEVPADTAPVTDAQIKQ 235 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 KD + E + + +++ + + + + T P Q Sbjct: 236 WYDSHGKDFRQAESVSLEYVEINGANLP-APTAADEATLRKRYEDEKAKFTTPEQRQAS- 293 Query: 268 EYI 270 + Sbjct: 294 HIL 296 >gi|149179628|ref|ZP_01858140.1| peptidyl-prolyl isomerase [Planctomyces maris DSM 8797] gi|148841534|gb|EDL55985.1| peptidyl-prolyl isomerase [Planctomyces maris DSM 8797] Length = 217 Score = 69.3 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 54/158 (34%), Gaps = 7/158 (4%) Query: 44 TTINGEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETLKKQEIEKSGIT 96 +NG VIT D+ +R+ALL + ++ LI ETL+ Q E I Sbjct: 59 AVVNGYVITGTDLDQRLALLVNANQTEIPAEELQRVRAQVLRNLIDETLQIQAAEAEEIV 118 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 V F + A ED ++L G K+ + + W +++ Sbjct: 119 ISDAEVEQTFARVAAQNNQRPEDMENYLASIGSSSASLKRQIRGELAWQRLLRQKVSFFV 178 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 E+ ++++ + +F + Sbjct: 179 NVSAEEVNELMERLEAAKGTDEYWLWEIFMSATPENDA 216 >gi|313204350|ref|YP_004043007.1| ppic-type peptidyL-prolyl cis-trans isomerase [Paludibacter propionicigenes WB4] gi|312443666|gb|ADQ80022.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paludibacter propionicigenes WB4] Length = 647 Score = 69.3 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 35/364 (9%), Positives = 83/364 (22%), Gaps = 71/364 (19%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--INGELEKIAV- 77 V+ + S + TING+ ++ + L++ Sbjct: 5 VIAFLTFWALSVGSFAQTSDPVLMTINGKPVSKSEFEYIYNKNNTNNSLDKKTLDEYVEL 64 Query: 78 -------------------QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 + I E + D + + + Sbjct: 65 FINFKLKVEEAKKQGIDTTEAFISELSGYRSQLTRPYLTDPKVDEILLREAYERSKEDVD 124 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQS--IWPDVVKNDFMLKYGNLEMEIPANKQ-------- 168 + + IW + +F + + A K Sbjct: 125 VSHILIRIPQNALPADTLKAWNEINTIWRRLEHENFSRVAKEISQDESAEKNSGRLGWIS 184 Query: 169 -----------------------------------KMKNITVREYLIRTVLFSIPDNKLQ 193 + T+ + L+ ++ Sbjct: 185 VFRTVYPFESAAYNTPVGSYSKPIRTAFGYHIVKVHARRKTLGDVLVSHIMILTNKGDDF 244 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK- 251 + I + K++ G+ + + P+F+ Sbjct: 245 LNKRAKTTIDSLYRRLIAGEDFGALARKYSQDKTTSSKNGELPWFGSGRMVPEFEKAAFA 304 Query: 252 -KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLR 309 K+ + P T G + + DK+ + LKA L + + + + ++ KLR Sbjct: 305 LKNVGEISKPIQTNGGWHILKLLDKKGIASFDELKADLERKVKRDDRSKSGQQVFLAKLR 364 Query: 310 SNAI 313 + Sbjct: 365 NEYN 368 >gi|290769658|gb|ADD61438.1| putative protein [uncultured organism] Length = 520 Score = 69.3 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 22/299 (7%), Positives = 82/299 (27%), Gaps = 38/299 (12%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 ++ + +F + A + ING+ + + + G + Sbjct: 1 MVLMVRLFWVFFFLGFG-LAVSAQDDPVLMRINGKEVLRSEFERSYNKGGTSVGAG---R 56 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A+ + + + + ++ +T F + + + + + + Sbjct: 57 KALDAYVNKFIDFRLKIEAAEVVGLDTSRVFQKEQDEYRRCLIKSYLTDEETAEQEARQY 116 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + V YL + + Sbjct: 117 YDKMKSGRRAGRVYVKHIFK-----------------------YLPQNISGHTLREMESR 153 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + + + + + ++ + +F++++ + Sbjct: 154 MDSIYRALAKEGGAVPSFDACVEQFSDEKKAF---------WVGWLQMPVEFEDIVFGLN 204 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKKLRSN 311 + P++T +G+ + + +++++ +K + Q ++K +V KL+ Sbjct: 205 AGEISRPFLTPQGIHIVKVLEQQEILPFERMKDKIIRCQTRRHGMDKGTRAFVDKLKKE 263 >gi|83718610|ref|YP_442650.1| peptidyl-prolyl cis-trans isomerse D [Burkholderia thailandensis E264] gi|83652435|gb|ABC36498.1| peptidyl-prolyl cis-trans isomerse D, putative [Burkholderia thailandensis E264] Length = 632 Score = 69.3 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 19/305 (6%), Positives = 63/305 (20%), Gaps = 29/305 (9%) Query: 26 CIVPIVSYKSWAMSSRIRT---TINGEVITDGDISKRIALLKLQ-KINGELEKIAVQELI 81 + + +S + +G D + +L +Q + ++ L Sbjct: 95 LTASDGAVRQTLLSDPVVASLKKADG----SFDAERYTQMLAMQGMTPDQYQERVRYNLA 150 Query: 82 VETLKKQEIEKSGITFDSNTV-----------NYFFVQHARNTGLSAEDFSSFLDKQGIG 130 ++ + + + ++ A + Sbjct: 151 LQQIPASIVSSAFTPKSVARRLTELAEQQREVQQMMLKSADYATKVQPTDAQISAYYDAH 210 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 F A + + ++++ + +R I Sbjct: 211 KQAFATREAATIQYLVYSQAAAAAAAQPSDIDVKKYYDGNIARYRTDAQVRVSHIFIAAA 270 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQ 245 K + AE+ + ++ + A G ++ Sbjct: 271 KDASAADKAAAKAKAEQLLAEVKAHPDQFAQIAEKNSQDAPSAAKGGDLGFITRGSTAGG 330 Query: 246 FQNLLKK---SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 + + G + D + + + ++ A Sbjct: 331 AAFDDAAFALKKGEISGVVQGDFGFHILKATDLKPAVVKPLA--EVKDSIVADLKQQFAA 388 Query: 303 EYVKK 307 + Sbjct: 389 KAFAD 393 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 19/224 (8%), Positives = 61/224 (27%), Gaps = 16/224 (7%) Query: 15 LLTTYFVLII-FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN---- 69 + +++ IV I ++ + S +NG IT + + Q Sbjct: 1 MFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGMLRQQVDQARQMLGA 60 Query: 70 ---------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQHARNTGLSAE 118 E + + LI + E ++ +T V + + Sbjct: 61 QFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLTASDGAVRQTLLSDPVVASLKKADG 120 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 F + Q + + + ++ + + +++ + ++ Sbjct: 121 SFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSVARRLTELAEQQR 180 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++ ++ D + Q + + + ++ Sbjct: 181 EVQQMMLKSADYATKVQPTDAQISAYYDAHKQAFATREAATIQY 224 >gi|307298526|ref|ZP_07578329.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotogales bacterium mesG1.Ag.4.2] gi|306915691|gb|EFN46075.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotogales bacterium mesG1.Ag.4.2] Length = 733 Score = 69.3 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 20/243 (8%), Positives = 61/243 (25%), Gaps = 11/243 (4%) Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + + LI + ++G+ + V+ + ++ E+ S + Q Sbjct: 117 IRYDLFKSLIDQKTLLFYATENGVLPTAEQVDAE-TNRIVDEYVADEETKSAIIYQYGSV 175 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + F + + + + N ++E + Y + ++ Sbjct: 176 DAFSELVRDYVVTQMLATNVTQKAIPDMEERFENYVNENMEDLKINYEKVDANHILVSDE 235 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQN-L 249 + +F+ ++ G + +F++ Sbjct: 236 ASAVEIKSMIDSGEI-------SFTDAATQFSIDTDTAINGGALGEFGRGQMVQEFEDAS 288 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKKL 308 + P +Q G I + K + + +++ Sbjct: 289 FDATPGLVIGPVESQFGYHLIRVNSKTTFDTFEEFASTSAYQTELGRFENEEFNKWIADY 348 Query: 309 RSN 311 R Sbjct: 349 RQQ 351 >gi|317128176|ref|YP_004094458.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus cellulosilyticus DSM 2522] gi|315473124|gb|ADU29727.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus cellulosilyticus DSM 2522] Length = 293 Score = 69.3 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 21/233 (9%), Positives = 58/233 (24%), Gaps = 15/233 (6%) Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A++++ E + ++ I + + + E D++ Sbjct: 50 QALKDIYGEEVLTGLVQLRIIEQKAEELGITDEDVQQQIDDLKEGVGIDNDEEFYNFLAS 109 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 +Q + + + + + + E +L Sbjct: 110 QQVRGEDDLKERFLSHLVLEHLAGHVGDPTDEDLQELYEKGEEVEASHILVY-------- 161 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-S 253 ++ D E + ++ G+ Y + F+ Sbjct: 162 ---TEEEALDIYERIENGEDFATLAQDYSEDGSASQGGQLGYFGRGAMVAPFEVAAFNLD 218 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 N ++P +Q G I + D+ A + T + + + Sbjct: 219 VNEVSSPVESQFGYHIIKVTDR---LPFEAPFEEVRYMLEDTFNSQKVNKMMD 268 >gi|224438394|ref|ZP_03659321.1| hypothetical protein HcinC1_10416 [Helicobacter cinaedi CCUG 18818] gi|313144836|ref|ZP_07807029.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129867|gb|EFR47484.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 276 Score = 69.3 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 95/295 (32%), Gaps = 32/295 (10%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 I + V + + + +NG IT +IS KLQ +K A+ LI E Sbjct: 5 ICFLCLCVLVSQAEIIAGVAIRVNGHAITLSEIS------KLQTQMKISKKAAIDMLINE 58 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 LK EIE+ I+ D ++ Q A N LS + + + + G ++ + Q Sbjct: 59 RLKDDEIERFKISIDEFKIDEEISQIAANANLSKDALLAKVTRDGTTLQEYRNKIKKQLQ 118 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++++ E K+ + N + K Sbjct: 119 TKELMQRILASNISISS-EDELLSYYTKHKKEFLLPSSVRVVRYTAQNEGNLQNAIQSPK 177 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263 + ++ + + S L PQ + + NN P +T Sbjct: 178 TTIQGVQKINET---------------------ISLSSLSPQIAQVFLNTPNNEFTPVLT 216 Query: 264 QKG--VEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 G + ++ K ++ + K + E+ K+RS+A I Sbjct: 217 TGGNSFVSFLVKERLGEKAISFDEAKPLINQKIMAQKEQSIITEHFNKIRSSANI 271 >gi|183219611|ref|YP_001837607.1| putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909750|ref|YP_001961305.1| hypothetical protein LBF_0181 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774426|gb|ABZ92727.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778033|gb|ABZ96331.1| Conserved hypothetical protein; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 349 Score = 69.3 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 41/334 (12%), Positives = 99/334 (29%), Gaps = 27/334 (8%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYK--SWAMSSRIRTTINGEVITDGDISKRIALL 63 F + F ++ + + + S+ + + + + I+ D + + Sbjct: 1 MQKRPRFQRYFVFIFAAVVSVSLTVPTNPLGSYESLNAVLAIVGPKSISTLDYEEGVERY 60 Query: 64 KLQ-------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--QHARNTG 114 K + G L + LI + ++ I + + A+ Sbjct: 61 KNLSRFFPNYRKKGSLHSQVIDFLIDRAVVDNVADEESIQVNEKRIEAEIQKRMEAQGIS 120 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 + S + + + + L Q +++ E E+ + K K Sbjct: 121 DLEQFKKSVQSQFNLPYDVWLDDLPYQIKKGQLLQIKVSPPL-PSEQEVQSWYNKNKAKV 179 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV----- 229 E+ R ++FS + + + E R + +D + + AS + Sbjct: 180 GNEFKFRELVFSP---ANGSIEEESRLFNELTEIRNKSLQDPSFFKLVASGPRNESRYRL 236 Query: 230 SIGKAQYLLESDLHPQFQNL-----LKKSQNNTTNPYVTQKG-VEYIAICDKRDLGGEIA 283 + G Y+ +L+ Q + + + + I R + A Sbjct: 237 NGGLVNYVPTFELYKTQPTTASVLAQVGGQGKFSEVFRDDRKRYCLVYIEGMRPTPLD-A 295 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 ++ + K + E+V R N I + Sbjct: 296 VRKGIQGFLFREKEQTSFEEWVVATRKNTSITIF 329 >gi|329769980|ref|ZP_08261377.1| hypothetical protein HMPREF0433_01141 [Gemella sanguinis M325] gi|328837540|gb|EGF87167.1| hypothetical protein HMPREF0433_01141 [Gemella sanguinis M325] Length = 311 Score = 69.3 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 98/315 (31%), Gaps = 36/315 (11%) Query: 13 IKLLTTYFV-LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K + + + V ++ S + I + +T+ DI + I + Sbjct: 1 MKKFKKAILPVALSISVIGLAGCSSGGTKYISSKAGD--VTEKDIVESI-------GANQ 51 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L K A +I + L + K +N A+ + F L ++G Sbjct: 52 LSKAATSMMIQKVLLDKYKNKINEKVIDEQLNK-----AQEQYGGKDKFEQILKQKGFTL 106 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + +K L +++ ++ + L+ NK + I + S + Sbjct: 107 DQYKDGLKVKAAQTIMINEYAGITEDKLKESYEKNKHQYHLA-----HILISVKSSSNPN 161 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD---LHPQFQ 247 + +K+ ++ + +++++ + + G + + D + Sbjct: 162 GLSDEEAKKKAEEVLKKIKDGGDFATLAKEYSNDTGNASNGGDLGWSSKEDNSYVSEFNN 221 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA----- 302 +++ ++ T G I + D +D L E+ Sbjct: 222 AAYALNKDQVSDVVKTPFGYHIIKVLDTKDSS-----YDELKTSLEEKAAEQAVKNDSTI 276 Query: 303 --EYVKKLRSNAIIH 315 + +KKL + Sbjct: 277 VSKALKKLFEEYNVK 291 >gi|164688876|ref|ZP_02212904.1| hypothetical protein CLOBAR_02524 [Clostridium bartlettii DSM 16795] gi|164602080|gb|EDQ95545.1| hypothetical protein CLOBAR_02524 [Clostridium bartlettii DSM 16795] Length = 351 Score = 69.3 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 31/343 (9%), Positives = 85/343 (24%), Gaps = 52/343 (15%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI--------------------- 51 ++ + L++ ++ I + +S T+NGE I Sbjct: 1 MQGMKKIVALVLAMVLGISMIGCSSNNS--VATVNGEGIPLEYYKIYTNWTRLGYESSYG 58 Query: 52 -TDGDISKRIALLKLQKIN------------------GELEKIAVQELIVETLKKQEIEK 92 T + + + +Q + + Q+ ++ Sbjct: 59 FTSSTWETEMQDQTTSSNSDSSGTSDKSKSSEKTTYWDNFKSQVLQAMEQSEVIYQKAKE 118 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 + + ++ + + + + F Sbjct: 119 VKVEPTDKEIQEQVDDFNKSINSNETTKEQAKKAGITDKFLTYIFTRE--LANSAYQEYF 176 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 + + + K ++ + + + + K E L+ Sbjct: 177 NKHTKVDDATLKKEYESNKQAYNTVTASHILISTKDSDGKELSAKKKAEAKKKAEEVLQK 236 Query: 213 PKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKG 266 K+ K A K + G+ + +F + K ++ + ++ T G Sbjct: 237 AKNGEDFAKLAKKYSEDTSNAENGGELGAFTYPQMVEEFSKAAFKLNKGDISDIVETSYG 296 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 I + DK A+K + K + + + Sbjct: 297 YHIIKVTDK--ADTFDAVKNSVKTAVLSNKYSEQVQKLFDDAK 337 >gi|290893167|ref|ZP_06556155.1| rotamase [Listeria monocytogenes FSL J2-071] gi|290557329|gb|EFD90855.1| rotamase [Listeria monocytogenes FSL J2-071] Length = 293 Score = 68.9 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 29/304 (9%), Positives = 84/304 (27%), Gaps = 40/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + ++ + S + + T + +T ++ + + Sbjct: 1 MKKKLILGLVMVMALFSLAACGGGGDVVKT-DSGDVTKDELYDAMK--------DKYGSE 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 VQ+L E + + + S D + + + Sbjct: 52 FVQQLTFEKILGDKYKVSDEDVD------------KKFNEYKSQYGDQFSAVLAQSGLTE 99 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + +V+ + + + + Sbjct: 100 KSFKSQLKYNLLVQKATEANTDTSDKVLKKYYET---------------WQPDITVSHIL 144 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--K 252 + + K+ E+ K + +++++ + G+ + P F+ K Sbjct: 145 VADENKAKEVEQKLKDGAKFADLAKEYSTDTATKENGGQLAPFGPGKMDPAFEKAAYALK 204 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKKLRSN 311 ++ + + P TQ G I + K + A ++ + +KK + Sbjct: 205 NKGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKKEYKD 264 Query: 312 AIIH 315 A + Sbjct: 265 ANVK 268 >gi|134302454|ref|YP_001122424.1| hypothetical protein FTW_1602 [Francisella tularensis subsp. tularensis WY96-3418] gi|134050231|gb|ABO47302.1| hypothetical protein FTW_1602 [Francisella tularensis subsp. tularensis WY96-3418] Length = 467 Score = 68.9 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 108/271 (39%), Gaps = 13/271 (4%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-----GELEKIAVQELIV 82 V + + ++ +N IT ++ + +A L+ + N L++ A+Q+LI Sbjct: 40 VSMNVSDKKYLVNKTVAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKRQALQDLIS 99 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 +++ Q E++ I + ++ A G+S E ++ G+ + +K+ + Q Sbjct: 100 QSVLLQLAERNNIMISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRDQL 159 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV------REYLIRTVLFSIPDNKLQNQG 196 + + + + EI +K + + Y ++ ++ ++PD+K Q Sbjct: 160 MISQLQQQAIAQQVYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKARQK 219 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQ 254 + K A +++F+ + VS G ++ D P + + + Sbjct: 220 KIDLFKKLALAVNDGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKELKN 279 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 + + P++ ++ I I + + ++ K Sbjct: 280 HQVSQPFIVNHTLQMIYIDNIDEKAPILSKK 310 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 26/271 (9%), Positives = 78/271 (28%), Gaps = 9/271 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + ++ +KL + + + + + + + D + V+ Sbjct: 188 QKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVNDGSIDFSEIVKQFSQ 247 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + V F++ + + I +K Sbjct: 248 APNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQ-VSQPFIVNHTLQMIYIDNIDEKAPI 306 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ + I + N+ + ++ A+ + + K+ + G Sbjct: 307 LSKKVTKYYVYAIEIKLDGGMNEDGAKSSLERAKLAIESGQEFTKVALKYNQDYDHPN-G 365 Query: 233 KAQYLLESDLHP-----QFQNLLKKSQNNTTNPYVTQK-GVEYIAICDKRDLGGEIALKA 286 +++ E D P F L + +N + P+ I ++ LK Sbjct: 366 NFRWVAELDSPPSLPPAAFAQLKQLKENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKE 425 Query: 287 Y-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ ++ ++ +A I Sbjct: 426 QKALEAIFSEKAQEIYKTWLTSMKDDAYIEI 456 >gi|229846060|ref|ZP_04466172.1| lipoprotein signal peptidase [Haemophilus influenzae 7P49H1] gi|229811064|gb|EEP46781.1| lipoprotein signal peptidase [Haemophilus influenzae 7P49H1] Length = 622 Score = 68.9 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 46/395 (11%), Positives = 111/395 (28%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + I + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLTNSKISKFILGLITVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 AL---LKLQKINGE-------------LEKIAVQELIVETLKKQEIE------------- 91 ++ Q+ L + V +I + L +Q ++ Sbjct: 61 NQEFEIRAQREGEAFMGQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 92 ----KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNSVYQRILQQNRLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 VK D M K + EI + + V+ ++ + Sbjct: 181 VKNSAEIFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 189 DNKLQNQGFV----------------------------QKRIKDAEESRLRLPKDCNKLE 220 + + V ++ K A E + + + Sbjct: 241 ADNISKNLQVTDVEIAQYYQDNKAQFMTQRLAHIQFANEQDAKVAYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ ++L F++ + P + + +++ Sbjct: 301 TKSLDKISGENGGDLGWVNANELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA ++ + +E K+ A Sbjct: 360 QSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394 >gi|325282949|ref|YP_004255490.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus proteolyticus MRP] gi|324314758|gb|ADY25873.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus proteolyticus MRP] Length = 652 Score = 68.9 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 32/327 (9%), Positives = 96/327 (29%), Gaps = 13/327 (3%) Query: 1 MTSKV-FTSLSDFIKLLTTYFVLIIFC---IVPIVSYKSWAMSSRIRTTINGEVITDGDI 56 M K +L + LL + + F ++ +NG+ IT + Sbjct: 1 MNKKTALNALLTVLALLMVGGMALQFLPGDGAKTITNAVRGEQGTPAIRVNGKAITAEKL 60 Query: 57 S--KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD---SNTVNYFFVQHAR 111 + L+ +I + ++++ + ++ + + + Sbjct: 61 QKIQDNNPSPFASQGKALQDDFRTFMISQVVRQELMVQAARDINVTREDVNAEVTKVREQ 120 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 N ++ L + G+ D+ +++ + + E E+ Sbjct: 121 NNLTDDAAWTDALQRVGLSDSEYREQVKEGLAVQRKNEAIEAAVPAATEQEMKTYYDLNP 180 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 + E +R + D++ + + + + A+ + L E + Sbjct: 181 TLFQTEQRLRGRQ-IVVDDEKKARELLAQARGGADFAELAKKNSTENAENGGALGALGEG 239 Query: 232 GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYL 288 G Q + L + ++ T+ + + + + + +K + Sbjct: 240 GALQPVEPVVLPEEVAAAVQALPAPGLTDVVASGGRFYVVKVEELLPPETKPFETVKEEV 299 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +K ++ + + A I Sbjct: 300 KTELEKSKKRAAVEAFMDEQLAGAKIE 326 >gi|219847928|ref|YP_002462361.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus aggregans DSM 9485] gi|219542187|gb|ACL23925.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus aggregans DSM 9485] Length = 302 Score = 68.9 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 29/285 (10%), Positives = 61/285 (21%), Gaps = 67/285 (23%) Query: 43 RTTINGEV-------I--------TDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 +N E+ I T I + + + +L + +++I L Sbjct: 43 VADVNNEIKRAIGDGIANALASGQTREQIEQIV-------VENDLRRQIFEQMIQNELLL 95 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + GI D ++ N AE + Sbjct: 96 YYARQHGIGVDPVALDAVVFNRISNDASPAE----------------VLDQRSVLAREQI 139 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 V R +L + + Sbjct: 140 VLEIIARNTRADMA-----------------HARHIL-----------VDDEASAQAILA 171 Query: 208 SRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG 266 + + G + D P F+ + NT T G Sbjct: 172 DLQGGANFATLAATRSRDTASAANGGDLGWATRGDFVPAFEEAIFTLPLNTPQIVKTDFG 231 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + ++ + QN ++ + ++LR Sbjct: 232 FHVVEVLERELQRPFDTFEQLRVRQNAGQFYQETFVPWYEELRRQ 276 >gi|57339632|gb|AAW49803.1| hypothetical protein FTT0468 [synthetic construct] Length = 508 Score = 68.9 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 108/271 (39%), Gaps = 13/271 (4%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-----GELEKIAVQELIV 82 V + + ++ +N IT ++ + +A L+ + N L++ A+Q+LI Sbjct: 72 VSMNVSDKKYLVNKTVAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKRQALQDLIS 131 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 +++ Q E++ I + ++ A G+S E ++ G+ + +K+ + Q Sbjct: 132 QSVLLQLAERNNIMISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRDQL 191 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV------REYLIRTVLFSIPDNKLQNQG 196 + + + + EI +K + + Y ++ ++ ++PD+K Q Sbjct: 192 MISQLQQQAIAQQVYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKARQK 251 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQ 254 + K A +++F+ + VS G ++ D P + + + Sbjct: 252 KIDLFKKLALAVNDGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKELKN 311 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 + + P++ ++ I I + + ++ K Sbjct: 312 HQVSQPFIVNHTLQMIYIYNIDEKAPILSKK 342 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 26/271 (9%), Positives = 78/271 (28%), Gaps = 9/271 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + ++ +KL + + + + + + + D + V+ Sbjct: 220 QKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVNDGSIDFSEIVKQFSQ 279 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + V F++ + + I +K Sbjct: 280 APNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQ-VSQPFIVNHTLQMIYIYNIDEKAPI 338 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ + I + N+ + ++ A+ + + K+ + G Sbjct: 339 LSKKVTKYYVYAIEIKLDGGMNEDGAKSSLERAKLAIESGQEFTKVALKYNQDYDHPN-G 397 Query: 233 KAQYLLESDLHP-----QFQNLLKKSQNNTTNPYVTQK-GVEYIAICDKRDLGGEIALKA 286 +++ E D P F L + +N + P+ I ++ LK Sbjct: 398 NFKWVSELDSPPSLPPAAFAQLKQLKENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKE 457 Query: 287 Y-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ ++ ++ +A I Sbjct: 458 QKALEAIFSEKAQEIYKTWLTSMKDDAYIEI 488 >gi|15604516|ref|NP_221034.1| hypothetical protein RP673 [Rickettsia prowazekii str. Madrid E] gi|6226388|sp|O05951|Y673_RICPR RecName: Full=Uncharacterized protein RP673; Flags: Precursor gi|2073481|emb|CAA72481.1| hypothetical protein [Rickettsia prowazekii] gi|3861210|emb|CAA15110.1| unknown [Rickettsia prowazekii] gi|292572304|gb|ADE30219.1| hypothetical protein rpr22_CDS651 [Rickettsia prowazekii Rp22] Length = 295 Score = 68.9 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 92/303 (30%), Gaps = 23/303 (7%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELE 73 L++ V + A + I ++N + IT + R ++ + +L Sbjct: 4 LLLIITVFFTFNVAQASLTSIVASVNDKPITLNEFHARKKMIMALNNIENLTADQDKQLN 63 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +A+ LI E+L Q + ++ ++ +L + + Sbjct: 64 DLAINSLIDESLLFQYAGDRE--IPQDEIDNAIKSIEDRNKMAHGSLLQYLKNKSVNPES 121 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 F + + I +++ + EI V + + Sbjct: 122 FILQIKSELIKMNILSS-LSRSVQVSNKEIDVAILSSDQKDVEILMQVFRSKDGSNKAFT 180 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 ++ R+K + + L ++ SK+ ++ + + Sbjct: 181 KMNHLKNRLKKCSDVKRTLYDKFATMQIITSKLSNIEG------------VKQTIVKDLI 228 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + +N + E I +C K+ L Y+ T KI + + K +R A Sbjct: 229 PDKASNVFEVNNKFEIILVCSKKILNVNADENNYVVNFLTNKKISQKAQKIFKNMRKKAA 288 Query: 314 IHY 316 I Sbjct: 289 IRI 291 >gi|148826351|ref|YP_001291104.1| lipoprotein signal peptidase [Haemophilus influenzae PittEE] gi|148716511|gb|ABQ98721.1| lipoprotein signal peptidase [Haemophilus influenzae PittEE] Length = 622 Score = 68.9 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 46/395 (11%), Positives = 111/395 (28%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + I + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLTNSKISKFILGLITVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 AL---LKLQKINGE-------------LEKIAVQELIVETLKKQEIE------------- 91 ++ Q+ L + V +I + L +Q ++ Sbjct: 61 NQEFEIRAQREGEAFMGQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 92 ----KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNSVYQRILQQNRLTSDGYASILRASLPLEQIQNGIANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 VK D M K + EI + + V+ ++ + Sbjct: 181 VKNSAEIFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 189 DNKLQNQGFV----------------------------QKRIKDAEESRLRLPKDCNKLE 220 + + V ++ K A E + + + Sbjct: 241 ADNISKNLQVTDVEIAQYYQDNKAQFMTQRLAHIQFANEQDAKVAYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ ++L F++ + P + + +++ Sbjct: 301 TKSLDKISGENGGDLGWVNANELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA ++ + +E K+ A Sbjct: 360 QSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394 >gi|206560356|ref|YP_002231120.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia J2315] gi|198036397|emb|CAR52293.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia J2315] Length = 644 Score = 68.9 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 24/273 (8%), Positives = 58/273 (21%), Gaps = 22/273 (8%) Query: 53 DGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 D+ + LL Q + ++ L ++ + + + R Sbjct: 133 SIDVERYAQLLSFQGMTPEQYQERVRYSLALQQIPASIVSSAFTPKSLAQRLSELAAQQR 192 Query: 112 NTGLSAEDFSSFLDKQGIGDNH---FKQYLAIQSIWPDVVKNDF--------MLKYGNLE 160 S F K D + P+ + E Sbjct: 193 EVQALVLKTSDFAAKVQPTDAQLTAYYDAHKQSFATPETATIQYLVYSPAAAAASAQPTE 252 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +I E +R I + AE+ + ++ Sbjct: 253 ADIKKFYDDNPTHFRTEAQVRVSHIFIAAPGSASAADKAAAKAKAEQLLADVKAHPDQFA 312 Query: 221 KFA-----SKIHDVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 + A G ++ Q + + + G + Sbjct: 313 QIAQKSSQDAPSAAKGGDLGFITRGSTAGGKAFDDAAFSLKQGDVSGIVQSDLGFHILKA 372 Query: 273 CDKRDL--GGEIALKAYLSAQNTPTKIEKHEAE 303 + + +K ++ K ++ Sbjct: 373 TEVKPAVVKPFAEVKDQIAIDLKQQYASKAFSD 405 Score = 45.1 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 20/211 (9%), Positives = 54/211 (25%), Gaps = 15/211 (7%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------GELE 73 V I ++ + S +NG IT + Q E Sbjct: 26 FVGIQGFRGFFDDSANVAAVNGHKITRVEFDGAFRQQIDQARQALGGQFDIKMFDTPEHR 85 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--QHARNTGLSAEDFSSFLDKQGIGD 131 K + LI + + E ++ +T N V + + Q + Sbjct: 86 KQVLDGLIQQRVLADETQRLHLTASDNAVRDALMSDPMIASLKKPDGSIDVERYAQLLSF 145 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + + + Q++ + ++ ++ ++ D Sbjct: 146 QGMTPEQYQERVRYSLALQQIPASIVSSAFTPKSLAQRLSELAAQQREVQALVLKTSDFA 205 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q + + + ++ Sbjct: 206 AKVQPTDAQLTAYYDAHKQSFATPETATIQY 236 >gi|164688004|ref|ZP_02212032.1| hypothetical protein CLOBAR_01649 [Clostridium bartlettii DSM 16795] gi|164602417|gb|EDQ95882.1| hypothetical protein CLOBAR_01649 [Clostridium bartlettii DSM 16795] Length = 302 Score = 68.9 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 91/270 (33%), Gaps = 11/270 (4%) Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 D + + + ++++ + +I + Q+ +K I + VN + Q + Sbjct: 37 DADYLAQFKESKDNDDKIKQEVISYMIDNEVVYQQAQKEKIKVTDDEVNQKYSQIEKMLD 96 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 + E D D + ++ + LK + E+E + K Sbjct: 97 TNQEYKKLLDDAGVDEDYLKETIKKDLAVQKYRENYEQDLKVTDKEVEKYYKEHKDDFKE 156 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDV 229 ++ ++ DN ++ +K ES L+ K+ EK A K Sbjct: 157 ESVEAYHILVSTLDDNNKPVDDSKKEELKSKAESLLKEIKNGGDFEKIAKENSDDKSSGK 216 Query: 230 SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAY 287 G Y + + QF + K + +N + T G E + + +K+ + + Sbjct: 217 KGGYLGYFTKDSKNAQFTKEAFKLEKGQVSNVFETPFGYEIVKVTNKKTEQKSLEDSREE 276 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + K + V LR + + + Sbjct: 277 IVNRILADK----YLDQVNSLREKSDVQRF 302 >gi|167581584|ref|ZP_02374458.1| peptidyl-prolyl cis-trans isomerse D, putative [Burkholderia thailandensis TXDOH] Length = 644 Score = 68.9 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 19/305 (6%), Positives = 63/305 (20%), Gaps = 29/305 (9%) Query: 26 CIVPIVSYKSWAMSSRIRT---TINGEVITDGDISKRIALLKLQ-KINGELEKIAVQELI 81 + + +S + +G D + +L +Q + ++ L Sbjct: 107 LTASDGAVRQTLLSDPVVASLKKADG----SFDAERYTQMLAMQGMTPDQYQERVRYNLA 162 Query: 82 VETLKKQEIEKSGITFDSNTV-----------NYFFVQHARNTGLSAEDFSSFLDKQGIG 130 ++ + + + ++ A + Sbjct: 163 LQQIPASIVSSAFTPKSVARRLTELAEQQREVQQMMLKSADYATKVQPTDAQISAYYDAH 222 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 F A + + ++++ + +R I Sbjct: 223 KQAFATREAATIQYLVYSQAAAAAAAQPSDIDVKKYYDDNIARYRTDAQVRVSHIFIAAA 282 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQ 245 K + AE+ + ++ + A G ++ Sbjct: 283 KDASAADKAAAKAKAEQLLAEVKAHPDQFAQIAEKNSQDAPSAAKGGDLGFITRGSTAGG 342 Query: 246 FQNLLKK---SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 + + G + D + + + ++ A Sbjct: 343 AAFDDAAFALKKGEISGVVQGDFGFHILKATDLKPAVVKPLA--EVKDSIVADLKQQFAA 400 Query: 303 EYVKK 307 + Sbjct: 401 KAFAD 405 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 21/236 (8%), Positives = 67/236 (28%), Gaps = 18/236 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIF---CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + +L+ + +LI+ IV I ++ + S +NG IT + + Sbjct: 1 MLDFFRNHQRLMMFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGMLR 60 Query: 62 LLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF-- 106 Q + + + LI + E ++ +T V Sbjct: 61 QQVDQARQMLGAQFDAKAFDTPQRRQQLLDGLIQQRALADETQRLHLTASDGAVRQTLLS 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + + F + Q + + + ++ + + Sbjct: 121 DPVVASLKKADGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSV 180 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 +++ + ++ ++ ++ D + Q + + + ++ Sbjct: 181 ARRLTELAEQQREVQQMMLKSADYATKVQPTDAQISAYYDAHKQAFATREAATIQY 236 >gi|152995753|ref|YP_001340588.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinomonas sp. MWYL1] gi|150836677|gb|ABR70653.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinomonas sp. MWYL1] Length = 607 Score = 68.9 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 80/252 (31%), Gaps = 16/252 (6%) Query: 56 ISKRIALLKLQKINGEL---EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 +RI L + + + + K Q E++ + + N Sbjct: 150 FKERIKQDVLIQQPRNAIAGSEFVLPYQVDSVSKLQSQERTYDYVSFS-----LADESEN 204 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 T +S ++ ++ + +Q + +DF K + E+ Q + Sbjct: 205 TSVSDDELKAYYEANKENFKTPEQVKVNYVVIS---SSDFYGKVKITDAELQDAYQASIS 261 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSI 231 + +E + + ++ + +KR+++ E K + K++ I + Sbjct: 262 VLAQEERSASHILIETSDRSDD--EAKKRLEEVEAKLKAGAKFADLAAKYSDDIGSNKDG 319 Query: 232 GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD--KRDLGGEIALKAYLS 289 G Y+ + + F + L + Q G I + D K D+ + K L Sbjct: 320 GNLGYVEKGIMGSAFDDTLFSMKKGEVKSVKGQYGYHLIKLDDISKPDVPSFASKKEELL 379 Query: 290 AQNTPTKIEKHE 301 + K Sbjct: 380 QKLREDKARDAL 391 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 39/322 (12%), Positives = 93/322 (28%), Gaps = 23/322 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + F+++ F + + + + SS ++G IT + + Sbjct: 1 MLQDIRDKSQGIVVKIIVGFIVVTFALFGVDALVTSFNSSDTVAEVDGVDITRTQMLQGA 60 Query: 61 ALLKLQ-------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + Q + L++ A+ EL+ + + + G+ VN + + Sbjct: 61 ETQRRQLISMMGGQVNPALLEDNLLQRRALDELVQRVVLANQAKGLGLGVSDAQVNAYLL 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 Q + D + +L+ + + I DV+ E +P Sbjct: 121 QAEQFQTNGQFDQNKYLNFIRSLGFTPLAF--KERIKQDVLIQQPRNAIAGSEFVLPYQV 178 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + + +E V FS+ D + E ++ + Sbjct: 179 DSVSKLQSQERTYDYVSFSLADESENTSVSDDELKAYYEANKENFKTPEQVKVNYVVISS 238 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 GK + +++L +Q + + + R Sbjct: 239 SDFYGKV-KITDAELQDAYQASISVLAQ------EERSASHILIETSDRSDDEAKKRLEE 291 Query: 288 LSAQNTP-TKIEKHEAEYVKKL 308 + A+ K A+Y + Sbjct: 292 VEAKLKAGAKFADLAAKYSDDI 313 >gi|167619701|ref|ZP_02388332.1| peptidyl-prolyl cis-trans isomerse D, putative [Burkholderia thailandensis Bt4] gi|257138861|ref|ZP_05587123.1| peptidyl-prolyl cis-trans isomerse D, putative [Burkholderia thailandensis E264] Length = 644 Score = 68.9 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 19/305 (6%), Positives = 63/305 (20%), Gaps = 29/305 (9%) Query: 26 CIVPIVSYKSWAMSSRIRT---TINGEVITDGDISKRIALLKLQ-KINGELEKIAVQELI 81 + + +S + +G D + +L +Q + ++ L Sbjct: 107 LTASDGAVRQTLLSDPVVASLKKADG----SFDAERYTQMLAMQGMTPDQYQERVRYNLA 162 Query: 82 VETLKKQEIEKSGITFDSNTV-----------NYFFVQHARNTGLSAEDFSSFLDKQGIG 130 ++ + + + ++ A + Sbjct: 163 LQQIPASIVSSAFTPKSVARRLTELAEQQREVQQMMLKSADYATKVQPTDAQISAYYDAH 222 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 F A + + ++++ + +R I Sbjct: 223 KQAFATREAATIQYLVYSQAAAAAAAQPSDIDVKKYYDGNIARYRTDAQVRVSHIFIAAA 282 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQ 245 K + AE+ + ++ + A G ++ Sbjct: 283 KDASAADKAAAKAKAEQLLAEVKAHPDQFAQIAEKNSQDAPSAAKGGDLGFITRGSTAGG 342 Query: 246 FQNLLKK---SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 + + G + D + + + ++ A Sbjct: 343 AAFDDAAFALKKGEISGVVQGDFGFHILKATDLKPAVVKPLA--EVKDSIVADLKQQFAA 400 Query: 303 EYVKK 307 + Sbjct: 401 KAFAD 405 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 22/236 (9%), Positives = 67/236 (28%), Gaps = 18/236 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIF---CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + +L+ + +LI+ IV I ++ + S +NG IT + + Sbjct: 1 MLDFFRNHQRLMMFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGMLR 60 Query: 62 LLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF-- 106 Q E + + LI + E ++ +T V Sbjct: 61 QQVDQARQMLGAQFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLTASDGAVRQTLLS 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + + F + Q + + + ++ + + Sbjct: 121 DPVVASLKKADGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSV 180 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 +++ + ++ ++ ++ D + Q + + + ++ Sbjct: 181 ARRLTELAEQQREVQQMMLKSADYATKVQPTDAQISAYYDAHKQAFATREAATIQY 236 >gi|171058611|ref|YP_001790960.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptothrix cholodnii SP-6] gi|170776056|gb|ACB34195.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptothrix cholodnii SP-6] Length = 637 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 18/166 (10%), Positives = 45/166 (27%), Gaps = 8/166 (4%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 E ++ + + R + + + K + A Sbjct: 241 VTAGINVNEDDLRKYYDENAARYEQPQERRARHILVKLDADASDDAKAKAREKAAALLAE 300 Query: 212 LPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + K+ A + G ++ + F++ + + T+ Sbjct: 301 VQKNRAAFADLARRQSDDPGSAAQGGDLDWIARGAMVKPFEDAVFGLKKGELGGIVETEF 360 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 G+ I + D R GGE A + + ++ + +L Sbjct: 361 GLHVIEVTDTR--GGEKRAFANVRGELEAEVRKQLAQKRYAELAEQ 404 Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 57/161 (35%), Gaps = 18/161 (11%) Query: 5 VFTSLSDFIKLLTTYFVLII---FCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---- 57 +F + +LL L+I F +V I Y ++ S+ I+G IT + Sbjct: 1 MFDFVRRHNRLLQFGLALVIVPSFLVVGIQGYDQFSASNEAVANIDGRAITQTEWDAAHR 60 Query: 58 KRIALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--- 106 +++ ++ Q + +++ + +L+ E + +K + + F Sbjct: 61 QQVERVRAQMPGVDAKLLDSPAIKQKVLDDLVRERVMLVAAQKLLLAPTDQRLQRLFATD 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 Q A L+ +G+ F Q L + V Sbjct: 121 PQFASLRNADGSVRKDLLEARGMTSEQFAQQLRQEFALRQV 161 >gi|238783605|ref|ZP_04627626.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia bercovieri ATCC 43970] gi|238715483|gb|EEQ07474.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia bercovieri ATCC 43970] Length = 607 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 34/377 (9%), Positives = 101/377 (26%), Gaps = 87/377 (23%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING------------ 70 + F + + SY + +NG+ I+ + + + + + Sbjct: 2 LSFILTGVGSYLIGGSNDF-AAKVNGQEISRAQLEQAVQSERGRLQQQLGEQFSALAANE 60 Query: 71 ----ELEKIAVQELI-----------------VETLKKQEIEKSGITFDSNTVNYFFVQH 109 +L + + +L+ E +K + D+ N +++ Sbjct: 61 GYMQQLRQQVLGQLVNNMLLDQYAKKLGLTASDEQVKDAIRQAPYFQTDNKFDNNKYLEL 120 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQY---------LAIQSIWPDVVKNDF-------- 152 G + + F+ +Q I + + A + + + Sbjct: 121 VNRMGYTPDQFAQLQRQQLINQQLLQAFGDTGFVLPIEAQAMSELILQQREVRLATIDLK 180 Query: 153 --MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + E+ A + KN + ++ ++ +Q++ V + A + Sbjct: 181 ALQAQQKVTDEELKAYYDQNKNSFIAPEQMKISFIAMDAAAMQDKITVTEEDIAAYYDQH 240 Query: 211 R-------------------------------LPKDCNKLEKFASKI-HDVSIGKAQYLL 238 + ++ ++ I + G +L Sbjct: 241 KSSYTQPERRNYSVIQFKNEAEAKAALEELKKGADFAAMAKEKSTDIISRKNGGDLGWLE 300 Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTK 296 + + + ++ + G + + D + + + L+ Q K Sbjct: 301 PETTADELKQAKLSEKGQLSDVVKSSVGYLIVRLNDIKPEQVKPLSEVHDALAKQVKQEK 360 Query: 297 IEKHEAEYVKKLRSNAI 313 +K+ A Sbjct: 361 AVDAYYALQQKVSEAAT 377 >gi|163784187|ref|ZP_02179121.1| hypothetical protein HG1285_05540 [Hydrogenivirga sp. 128-5-R1-1] gi|159880547|gb|EDP74117.1| hypothetical protein HG1285_05540 [Hydrogenivirga sp. 128-5-R1-1] Length = 288 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 91/291 (31%), Gaps = 31/291 (10%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + S + + +I +N + ++ + +K LI L QE Sbjct: 18 VYSKEKEVLLDKIVIIVNDRPVLKSEVELAKKWFNISSDKEAAQK-----LIDHILLYQE 72 Query: 90 IEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 K GI + + ++ S E+F L KQGI N F + + V Sbjct: 73 ARKKGIKVMPQEIKAAIERISKANKVSSIEEFKKLLQKQGIAYNEFYDLIKREIAINKYV 132 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + K E + L + K + ++ Sbjct: 133 QFVIKPKILENSKEAVEETYRKVR----------------IIYLDKKDPDFKNKYEIIKN 176 Query: 209 RLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 L +K++ G + + ++ N + S+ T KG+ Sbjct: 177 NLTKNTFEELAKKYSDDSITAKEGGLLGKIKKGEVVDYLDNAVWSSKVGEIKKVKTDKGI 236 Query: 268 EYIAI--CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +I I +K+ + +I K + K+ + +KKLR A+I Y Sbjct: 237 YFIYIESEEKKFVPKDINTKDII------NKLNEEMKLLIKKLREKAVIEY 281 >gi|206889870|ref|YP_002249039.1| foldase protein PrsA 1, putative [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741808|gb|ACI20865.1| foldase protein PrsA 1, putative [Thermodesulfovibrio yellowstonii DSM 11347] Length = 292 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 85/307 (27%), Gaps = 43/307 (14%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K L + + IF + S + +T ++ + I L Q Sbjct: 1 MKYLKIFVIFTIFSLFFACSKS-----DEVVVKAGSSKLTKKELQEDIKSLPPQTKAFLA 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 V L E +K++ + + + Sbjct: 56 SPEGVNRLKDELIKREVLYEEAKKKNLAKSEE--------------------------FK 89 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + ++ +++ + E + +K K++ ++ +R + + Sbjct: 90 RRMEEFKKITLINMLLEQEIKTLQQVTEQDAKEYYEKNKDMFIKPVEVRLSQIVVKNEDE 149 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK 251 E + + ++ + S G + + L+PQ +N+ Sbjct: 150 AK---------KVYERIDKGEEFSKIAKELSRDEKTKASGGDIGFFKKGQLNPQIENVAF 200 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + P + + I D + + +K L Q K + Y+ L+ Sbjct: 201 SLRKGQVSMPLTFKGELYIFKITDVKGNPIDFEQIKGQLIEQLKAKKQQDWFNTYIDDLK 260 Query: 310 SNAIIHY 316 + Sbjct: 261 KKHKVEI 267 >gi|208778951|ref|ZP_03246297.1| peptidyl-prolyl cis-trans isomerase [Francisella novicida FTG] gi|208744751|gb|EDZ91049.1| peptidyl-prolyl cis-trans isomerase [Francisella novicida FTG] Length = 457 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 109/273 (39%), Gaps = 15/273 (5%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-------ELEKIAVQEL 80 V + + ++ +N IT ++ + +A L+ + N +L++ A+Q+L Sbjct: 28 VSMNVSDKKYLVNKTVAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKLKRQALQDL 87 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I +++ Q E++ I + ++ A G+S E ++ G+ + +K+ + Sbjct: 88 ISQSVLLQLAERNNIMISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRD 147 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV------REYLIRTVLFSIPDNKLQN 194 Q + + + + EI +K + + Y ++ ++ ++PD+K Sbjct: 148 QLMISQLQQQAIAQQVYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKAR 207 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ-YLLESDLHPQFQNLLKK- 252 Q + K A +++F+ + VS G + + ++ +K+ Sbjct: 208 QKKIDLFKKLALAVNDGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKEL 267 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 + + P++ ++ I I + + ++ K Sbjct: 268 KNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKK 300 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 26/271 (9%), Positives = 78/271 (28%), Gaps = 9/271 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + ++ +KL + + + + + + + D + V+ Sbjct: 178 QKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVNDGSIDFSEIVKQFSQ 237 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + V F++ + + I +K Sbjct: 238 APNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQ-VSQPFIVNHTLQMIYIDNIDEKAPI 296 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ + I + N+ + ++ A+ + + K+ + G Sbjct: 297 LSKKVTKYYVYAIEIKLDGGMNEDGAKSSLERAKLAIESGQEFTKVALKYNQDYDHPN-G 355 Query: 233 KAQYLLESDLHP-----QFQNLLKKSQNNTTNPYVTQK-GVEYIAICDKRDLGGEIALKA 286 +++ E D P F L + +N + P+ I ++ LK Sbjct: 356 NFRWVSELDSPPSLPPAAFAQLKQLKENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKE 415 Query: 287 Y-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ ++ ++ +A I Sbjct: 416 QKALEAIFSEKAQEIYKTWLTSMKDDAYIEI 446 >gi|90407416|ref|ZP_01215600.1| putative peptidyl-prolyl cis-trans isomerase D [Psychromonas sp. CNPT3] gi|90311447|gb|EAS39548.1| putative peptidyl-prolyl cis-trans isomerase D [Psychromonas sp. CNPT3] Length = 635 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 20/260 (7%), Positives = 60/260 (23%), Gaps = 11/260 (4%) Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 A + + + L+ + + + + Sbjct: 150 AKFSQSIKQDLVRRQLLNTLVSSEFILPIEIDNVDKLQAQQRVARILNISGRAFPQTTPI 209 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMKNITVREY 178 S + + Q V+ + K +++ A + R Sbjct: 210 SIKDIQAYYDQHEQNFQSLQQVSVDYVLLDAHKLSQKTVISDVQAQAYYDDHQVDYQRVE 269 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYL 237 + + + K+ + + + + + + G + Sbjct: 270 RRKVAHILVQGHS----ADALKKAQTILLALEKGADFSVLARAKSEDILSAKNDGALDWF 325 Query: 238 LESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNT 293 + QF ++ + G I + D + +KA + Sbjct: 326 EHGVMDEQFDKASFALTAKAPLSDIVKSTFGYHIIKLLDIQQKQTLPFAQVKATVMKTLK 385 Query: 294 PTKIEKHEAEYVKKLRSNAI 313 ++ + ++LR A Sbjct: 386 KENADERYYDLQQQLREVAF 405 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 27/238 (11%), Positives = 68/238 (28%), Gaps = 19/238 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + +++ F + + Y +S + T+NG+ I++ + + Sbjct: 1 MLDKMREGSQGIAAKIILIVIILSFALAGVSGYLGGGNAS-VAITVNGDEISNASVEQEY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + ++ A Q LI L Q I + V Sbjct: 60 KNERSRLQQQYGEQFDIIAASPGFVKQVRAQAKQTLISNLLIAQSIADMDLRIGDEQVKD 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + + +L ++ QSI D+V+ + + E +P Sbjct: 120 AIRKMPEFQVKGEFNNEQYLSTLRRASYTPAKFS--QSIKQDLVRRQLLNTLVSSEFILP 177 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + ++ + R + S ++ ++ + Sbjct: 178 IEIDNVDKLQAQQRVARILNISGRAFPQTTPISIKDIQAYYDQHEQNFQSLQQVSVDY 235 >gi|313622749|gb|EFR93091.1| foldase protein PrsA [Listeria innocua FSL J1-023] Length = 291 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 28/304 (9%), Positives = 83/304 (27%), Gaps = 40/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + ++ + S + + T + +T ++ + + Sbjct: 1 MKKKLILGLVMMMALFSLAACGGGGNVVKT-DSGDVTQDELYDAMK--------DKYGSE 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 VQ+L E + + + S D + + + Sbjct: 52 FVQQLTFEKILGDKYKVSDEDVD------------KKFKEYKSQYGDQFSAVLAQSGLTE 99 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + +V+ + + + + Sbjct: 100 KSFKSQLKYNLLVQKATEANADTSDKALKEYYKT---------------WQPDITVSHIL 144 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--K 252 + + K+ E+ K + +++++ + G+ + P F+ K Sbjct: 145 VADENKAKEVEQKLKDGAKFADLAKEYSTDTATKENGGQLAPFGSGKMDPAFEKAAYALK 204 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKKLRSN 311 ++ + + P TQ G I + K + ++ + +KK + Sbjct: 205 NKGDISAPVKTQYGYHIIQMDKPATKTTFDKDKKAVKESYLASQLTTENMQKTLKKEYKD 264 Query: 312 AIIH 315 A + Sbjct: 265 ANVK 268 >gi|218262307|ref|ZP_03476821.1| hypothetical protein PRABACTJOHN_02495 [Parabacteroides johnsonii DSM 18315] gi|218223458|gb|EEC96108.1| hypothetical protein PRABACTJOHN_02495 [Parabacteroides johnsonii DSM 18315] Length = 261 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 22/251 (8%), Positives = 74/251 (29%), Gaps = 10/251 (3%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--QKINGEL 72 ++ + I + V Y + I + + I DI + L+ Q+ +G+ Sbjct: 1 MMKKILTVFILACLSCVVYAQDNVIDEIVWVVGDDAILRSDIESQRLYLQNEGQRFDGDP 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + +++ ++ L + + + + V + + G + Sbjct: 61 YCVLPEQMAIQKLFLNQAKIDSVEVSESQVIQETDRWINFAINQMGSKEKLEEYFGKKIS 120 Query: 133 HFKQYLAIQSIWPDVVKN---DFMLKYGNLEMEIPANKQKMKNIT----VREYLIRTVLF 185 K + V+ + + E+ ++ + ++ + Sbjct: 121 QLKDERKEMIMEQQTVEQMKRQLIGEIKLTPSEVRKYYSQLSKDSLPNIPTTVEVQIITM 180 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHP 244 + + + ++ + ++ G+ +L ++ L P Sbjct: 181 EPKIPFEETDAIKARLRQFTDDINSGKYEFSTLARLYSEDPESAKRGGELGFLGKTSLLP 240 Query: 245 QFQNLLKKSQN 255 +F N+ ++ Sbjct: 241 EFANVAFNLKD 251 >gi|27368132|gb|AAN87191.1| LipA [Bacillus cereus] Length = 248 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 80/281 (28%), Gaps = 46/281 (16%) Query: 24 IFCIVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELEKIAVQE-LI 81 +++ + S + T + +T+ ++SK L+ Q L ++ + + L+ Sbjct: 3 TIISCVMLALSACGSSDNVVTSKVGN--VTEKELSKE---LRQQYGESTLYQMMLSKALL 57 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + E K + + + F GL ED K+ + + Sbjct: 58 DKYKVSDEEAKKKVEEAKDKMGENFKSTLEQLGLKNED-------------ELKEKMKPE 104 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + +K K + + +K Sbjct: 105 IAFEKAIKATVTEKDVKNNYKPEMKVSHILVKD------------------------EKT 140 Query: 202 IKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 K+ +E ++++ G+ +F+ K ++ Sbjct: 141 AKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAYKLDAGQVSD 200 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 P T G I + DK++L +K + +++ Sbjct: 201 PVKTTYGYHIIKVTDKKELKPFDEVKEKIRKDLEQQRLQDR 241 >gi|229589919|ref|YP_002872038.1| putative peptidylprolyl isomerase [Pseudomonas fluorescens SBW25] gi|229361785|emb|CAY48667.1| putative peptidylprolyl isomerase [Pseudomonas fluorescens SBW25] Length = 313 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 23/284 (8%), Positives = 75/284 (26%), Gaps = 29/284 (10%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI-AVQELIVETLKKQEIEKS 93 + A S + + I ++ +A L + A++ I L ++ + + Sbjct: 41 NPAASGPAVARLGNQQIDLPELKTVLASLPAESREQLRGNRGALETWIRSRLAQKAVLEQ 100 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 +Q + + V D+ Sbjct: 101 ADAQGWRQRPEV--------------------EQQTRAATEQIVFRDYMLSVSQVPADYP 140 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + Q + + +F ++ ++ + + ++ Sbjct: 141 SAAELQQAYDSGKAQWVT----PPLYRVSQIFLAANDPQTLDTVRRQAQELSRRAQAAPG 196 Query: 214 KDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 +F+ G + L P+ ++ + + ++ + G + Sbjct: 197 DFAALATQFSQDTDSAARGGDSGMQPLQQLVPEVRSAVSRLKVGAVSDVVQSAAGFHVLK 256 Query: 272 ICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ L+ L+ + E+ Y++ + + A Sbjct: 257 LTGQQPARTATLDELRERLTQALRAQRQEQIAKAYLEGMLNTAT 300 >gi|121606645|ref|YP_983974.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas naphthalenivorans CJ2] gi|120595614|gb|ABM39053.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas naphthalenivorans CJ2] Length = 282 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 20/188 (10%), Positives = 52/188 (27%), Gaps = 15/188 (7%) Query: 143 IWPDVVKNDFMLKYG---NLEMEIPANKQKMKNIT--VREYLIRTVLF--SIPDNKLQNQ 195 V++ + E E + + + +R +LF + N Sbjct: 82 AERQVIEAMVDGEVSSPQPNEDECQRYYEANPSQFMVGQALHVRHILFAVTPGVNVHALT 141 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-- 253 +K + + + + ++ G ++ D P+ N L Sbjct: 142 IHAEKALLELTRKDASPERFVQLAAELSNCPTSAQGGDLGWVGPDDCAPELANELFHQKH 201 Query: 254 ----QNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 T+ G I + ++R ++ ++ + +Y+ Sbjct: 202 SQWGMGVHPRLIHTRFGFHIIEVLNRRAGKTPAYAEVRERIATLLAVQSRARALHQYMSL 261 Query: 308 LRSNAIIH 315 L A++ Sbjct: 262 LIGEALVE 269 >gi|313143878|ref|ZP_07806071.1| cell binding factor 2 [Helicobacter cinaedi CCUG 18818] gi|313128909|gb|EFR46526.1| cell binding factor 2 [Helicobacter cinaedi CCUG 18818] Length = 296 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 38/321 (11%), Positives = 91/321 (28%), Gaps = 32/321 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEV-ITDGDISKR 59 M + + L+ + + +S ++ ++ TI+G+ +TD D+ Sbjct: 1 MIATILQILNFGEITMKKHLPAKQLFGAIFLSLAIASLQAKTYATIDGKPAVTDKDLE-I 59 Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 + +L + +I E + +Q I K+ +T + Sbjct: 60 LKQSIPNFNYAKLSDQEKEGIIQELVNRQLILKAAKAEKLDTSKEY-------------- 105 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + Q + K + + N + Sbjct: 106 ------------TEAINNIKDQLLIDLWSKKQVGGIQMPSVNDAQIKEIYKNNEGMFINQ 153 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + + + + +++ K +++ + + N + + G Sbjct: 154 EMHARHILVKTESEAKDIIKELDKAGKKAESKFIELANAKSTDPASKQAKNGGDLGTFQR 213 Query: 240 SDLHPQFQNLLKKSQNNTT--NPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPT 295 + +HP F N + T P T G I + K + K + Q Sbjct: 214 NVMHPDFANAASNLKPGTYTQEPVQTPFGYHVIYLIKKSEPKIIPYNEAKKIIEEQIKMQ 273 Query: 296 KIEKHEAEYVKKLRSNAIIHY 316 ++ + ++ LR A I Sbjct: 274 NVQGGMMQKIQALREKAKIQI 294 >gi|110679691|ref|YP_682698.1| peptidyl-prolyl cis-trans isomerase, putative [Roseobacter denitrificans OCh 114] gi|109455807|gb|ABG32012.1| peptidyl-prolyl cis-trans isomerase, putative [Roseobacter denitrificans OCh 114] Length = 276 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 23/239 (9%), Positives = 64/239 (26%), Gaps = 7/239 (2%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I + + K R L + + Sbjct: 20 IAAETQNHDGPKGKPGIAWRKAANAMAV--RTLLLQEARKRGVQAQVQEIAPSRFETEEE 77 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV-Q 199 + + + + + K ++ T + + +L + + + Sbjct: 78 ALVRGLLDEAVVVSAPSAASVRAEWEKDPLRFRTPPLWEVSHILVACDPRDEEARRQAHA 137 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT 258 + + ++ + + + G D P+F+ + ++ T Sbjct: 138 RAVDLTGQALGNPNGFAKLAARESDCGSKSTGGALGQQSPGDTVPEFEAALRQLTEGGIT 197 Query: 259 N-PYVTQKGVEYIAIC--DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P +T+ G I + + A+K +S + ++V+ L ++A I Sbjct: 198 GEPILTRYGWHIIKLDAVAIGAVLPFDAVKQKISDAMEKASWARAAKDFVQTLVASAEI 256 >gi|16801386|ref|NP_471654.1| hypothetical protein lin2322 [Listeria innocua Clip11262] gi|46396988|sp|Q929F4|PRSA2_LISIN RecName: Full=Foldase protein prsA 2; Flags: Precursor gi|16414834|emb|CAC97550.1| lin2322 [Listeria innocua Clip11262] Length = 291 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 28/304 (9%), Positives = 83/304 (27%), Gaps = 40/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + ++ + S + + T + +T ++ + + Sbjct: 1 MKKKLILGLVMMMALFSLAACGGGGNVVKT-DSGDVTQDELYDAMK--------DKYGSE 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 VQ+L E + + + S D + + + Sbjct: 52 FVQQLTFEKILGDKYKVSDEDVD------------KKFKEYKSQYGDQFSAVLAQSGLTE 99 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + +V+ + + + + Sbjct: 100 KSFKSQLKYNLLVQKATEANADTSDKALKEYYKT---------------WQPDITVSHIL 144 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--K 252 + + K+ E+ K + +++++ + G+ + P F+ K Sbjct: 145 VADENKAKEVEQKLKDGAKFADLAKEYSTDTATKENGGQLAPFGSGKMDPAFEKAAYALK 204 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKKLRSN 311 ++ + + P TQ G I + K + ++ + +KK + Sbjct: 205 NKGDISAPVKTQYGYHIIQMDKPATKTTFDKDKKAVKEAYLASQLTTENMQKTLKKEYKD 264 Query: 312 AIIH 315 A + Sbjct: 265 ANVK 268 >gi|237751766|ref|ZP_04582246.1| peptidyl-prolyl cis-trans isomerase [Helicobacter bilis ATCC 43879] gi|229373132|gb|EEO23523.1| peptidyl-prolyl cis-trans isomerase [Helicobacter bilis ATCC 43879] Length = 280 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 92/312 (29%), Gaps = 44/312 (14%) Query: 15 LLTTYFV--LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG---DISKRIALLKLQKIN 69 ++ ++ + + + + A+++++ ++G I+D + ++ + Sbjct: 1 MMKSFVLKRVAQVAAISSLCLMPMALNAKVLVNVDGIEISDSIFSALKQQNPSFNYDALP 60 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 +K + E+I + +K G+ Sbjct: 61 EAQKKQLLDEIIDGVVTANAAKKEGLDKSEEYRMANL----------------------- 97 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 Q + +K + + + K+ + I Sbjct: 98 -----------QMLSGLWLKKQVDSLSKTINVSVADAKKFYDANPKAFVTQNAEVRHILV 146 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG--KAQYLLESDLHPQFQ 247 K Q+ + I +++ + + + G K + Q Sbjct: 147 QKEQDAKNIIAEINKVPKAKTESKFEELAKKLSIDPGSKDNGGLMKLPINSPAIAPEFAQ 206 Query: 248 NLLKKSQNNTTN-PYVTQKGVEYIAI--CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 +LK S T P T+ G I + DK ++K L K+E+ E Sbjct: 207 EVLKMSAGTYTKNPVKTRYGYHIIYLKKLDKPATQTFDSVKGQLVELLKQQKMEEVLKEK 266 Query: 305 VKKLRSNAIIHY 316 VKK+R +A I Y Sbjct: 267 VKKMRDSAKITY 278 >gi|327479445|gb|AEA82755.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas stutzeri DSM 4166] Length = 318 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 20/240 (8%), Positives = 68/240 (28%), Gaps = 5/240 (2%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + + + V A + E + + G+ Sbjct: 66 VNGVAIAPQAIAQELQYHPAESRDEAVFLATQALVVRELLQQRIAELGLVVQAAPGESEE 125 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQGFVQ 199 ++ +++ + L + + R +L + P + + + + Sbjct: 126 EAATRTLIEQEVPLPLADEAACQQYYNGNRQRFFSAPLLAARHILLACPADDAEARSLAR 185 Query: 200 KRIKDAEESRLRLPK-DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 ++ + P+ + ++ G + + P+F+ L + Sbjct: 186 EQALGLLQQLQAAPQRFAELALQHSACPSKEQGGALGQISKGQTVPEFERQLFRLPVGLC 245 Query: 258 TNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 P ++ G + + + + + + A+ + ++Y++ L A I Sbjct: 246 QQPLESRYGYHLVFVDQRIEGEQLPYEIVAGTIRAELNQRVWQIGVSQYLQNLVGAANIE 305 >gi|213026808|ref|ZP_03341255.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 257 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 18/161 (11%), Positives = 49/161 (30%), Gaps = 12/161 (7%) Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + + +I A + + + IR + ++ + Sbjct: 28 QAPVSDADIQAYYDQHVDQFTQPERIRYSIIQTKTEDDAKAV---------LDALNKGED 78 Query: 215 DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273 ++ ++ I + G +L ES P+ +N K + + + G + Sbjct: 79 FATLAKEKSTDIISARNGGDMGWLEESATVPELKNAGLKEKGQISGVIKSSVGFLVARLD 138 Query: 274 DKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 D + + ++ ++A+ K +K+ A Sbjct: 139 DIQPAKVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAA 179 >gi|160890576|ref|ZP_02071579.1| hypothetical protein BACUNI_03019 [Bacteroides uniformis ATCC 8492] gi|317479882|ref|ZP_07938999.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 4_1_36] gi|156859575|gb|EDO53006.1| hypothetical protein BACUNI_03019 [Bacteroides uniformis ATCC 8492] gi|316903956|gb|EFV25793.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 4_1_36] Length = 520 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 26/301 (8%), Positives = 87/301 (28%), Gaps = 42/301 (13%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 ++ + +F + A + ING+ + + + G + Sbjct: 1 MVLMVRLFWVFFFLGFG-LAVSAQDDPVLMRINGKEVLRSEFERSYNKGGTSVGAG---R 56 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A+ + + + + + G + Sbjct: 57 KALDAYVNKFI--------------------------------DFRLKIEAAEVAGLDTS 84 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK--QKMKNITVREYLIRTVLFSIPDNKL 192 + + Q + + ++ E E K R Y+ + + Sbjct: 85 RVFQKEQDEYRRCLIKSYLTDEETAEQEARQYYDKMKSGRRAGRVYVKHIFKYLPQNISG 144 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 ++ R+ + + + + D ++ + +F++++ Sbjct: 145 HTLREMESRMDSIYRALAKEGGAVPSFDACVEQFSDEKKAF--WVGWLQMPVEFEDIVFG 202 Query: 253 -SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKKLRS 310 + + P++T +G+ + + +++++ +K + Q ++K +V KL+ Sbjct: 203 LNAGEISRPFLTPQGIHIVKVLEQQEILPFERMKDKIIRCQTRRHGMDKGTRAFVDKLKK 262 Query: 311 N 311 Sbjct: 263 E 263 >gi|322379924|ref|ZP_08054201.1| peptidyl-prolyl cis-trans isomerase [Helicobacter suis HS5] gi|321147622|gb|EFX42245.1| peptidyl-prolyl cis-trans isomerase [Helicobacter suis HS5] Length = 318 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 35/273 (12%), Positives = 78/273 (28%), Gaps = 36/273 (13%) Query: 51 ITDGDIS---KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 IT+ D +R K+ E +K +++ I L ++E +K + + Sbjct: 72 ITENDFDVIKQRNPNFDFNKLKPEQKKALLEQAINNLLIEREAKKEKLDDTAEFAKRMAG 131 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + IW + + + Sbjct: 132 YKKQLLVE---------------------------IWAKHQAEAIGKEDIPEDQLRKYYQ 164 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 +E R +L + + + K K E N+ + + Sbjct: 165 DNKTQFVQQEAKARHILVKTEADAKRVISELNKTPKTRIEK--EFIDIANRESIDPNTKN 222 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD--LGGEIA 283 + G ++ + P+F N + + T P T+ G I + K + Sbjct: 223 SKNGGDLGKFQKNQMAPEFSNAVFALKPGSYTKTPVKTEFGYHVIYLMSKNEPKTPTFEQ 282 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + +++ ++KLR N I+ Sbjct: 283 ARQTIIGILKEHQFQEYVKGELEKLRKNVRINI 315 >gi|224456680|ref|ZP_03665153.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella tularensis subsp. tularensis MA00-2987] gi|282158767|gb|ADA78158.1| Peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella tularensis subsp. tularensis NE061598] Length = 467 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 108/271 (39%), Gaps = 13/271 (4%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-----GELEKIAVQELIV 82 V + + ++ +N IT ++ + +A L+ + N L++ A+Q+LI Sbjct: 40 VSMNVSDKKYLVNKTVAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKRQALQDLIS 99 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 +++ Q E++ I + ++ A G+S E ++ G+ + +K+ + Q Sbjct: 100 QSVLLQLAERNNIMISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRDQL 159 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV------REYLIRTVLFSIPDNKLQNQG 196 + + + + EI +K + + Y ++ ++ ++PD+K Q Sbjct: 160 MISQLQQQAIAQQVYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKARQK 219 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQ 254 + K A +++F+ + VS G ++ D P + + + Sbjct: 220 KIDLFKKLALAVNDGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKELKN 279 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 + + P++ ++ I I + + ++ K Sbjct: 280 HQVSQPFIVNHTLQMIYIYNIDEKAPILSKK 310 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 26/271 (9%), Positives = 78/271 (28%), Gaps = 9/271 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + ++ +KL + + + + + + + D + V+ Sbjct: 188 QKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVNDGSIDFSEIVKQFSQ 247 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + V F++ + + I +K Sbjct: 248 APNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQ-VSQPFIVNHTLQMIYIYNIDEKAPI 306 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ + I + N+ + ++ A+ + + K+ + G Sbjct: 307 LSKKVTKYYVYAIEIKLDGGMNEDGAKSSLERAKLAIESGQEFTKVALKYNQDYDHPN-G 365 Query: 233 KAQYLLESDLHP-----QFQNLLKKSQNNTTNPYVTQK-GVEYIAICDKRDLGGEIALKA 286 +++ E D P F L + +N + P+ I ++ LK Sbjct: 366 NFKWVSELDSPPSLPPAAFAQLKQLKENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKE 425 Query: 287 Y-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ ++ ++ +A I Sbjct: 426 QKALEAIFSEKAQEIYKTWLTSMKDDAYIEI 456 >gi|325982743|ref|YP_004295145.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas sp. AL212] gi|325532262|gb|ADZ26983.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas sp. AL212] Length = 627 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 27/302 (8%), Positives = 83/302 (27%), Gaps = 38/302 (12%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKI-------------------AVQELIVET 84 NG V+ D + K I ++ + N + K EL+++ Sbjct: 100 AVKNGFVVLDSQLIKTIQDVQAFQKNNKFSKQQYEELLRNQGLTPVIFESRVRNELLLQQ 159 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHA-----------RNTGLSAEDFSSFLDKQGIGDNH 133 L E + + + + + + + + Sbjct: 160 LLDGYSENAITPRTTTERVQYLSEVRREISQSKITPDQFLSQAIPEEADISAYYEQHKTD 219 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 F + + + + I + ++ + + I + Sbjct: 220 FDLPERAKVEYLVLSLEKVAKNEFVSDEAINTYFLEHQSEFGQSEERKASHILISVSPDA 279 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQN 248 + Q + A+ ++ ++ ++ + A + + G + + F++ Sbjct: 280 PEEEKQMAREKAKRILEQVKQNPDQFAEIAKEHSDDPGSAMRGGDLGFFARGVMVKSFED 339 Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYV 305 + Q + ++ T G+ I + ++ ++ + +E E V Sbjct: 340 EIFSMQLDEISDIVETDFGLHIIKLTAIKEERHPDLEEVREQIENTLKVEMVESVFGEIV 399 Query: 306 KK 307 + Sbjct: 400 ED 401 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/215 (10%), Positives = 55/215 (25%), Gaps = 17/215 (7%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-------------AL 62 + ++ F + SY++ + GE I+ + + + Sbjct: 14 VILGLAVLPFMFWGVESYRNDGSE-GYVAVVEGEEISRREYEQALRDHHERMRAMLGANF 72 Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAED 119 E+ ++ LI + L QE K+G + + +N S + Sbjct: 73 DSAMLDTSEVRSSVLERLIQQRLLYQEAVKNGFVVLDSQLIKTIQDVQAFQKNNKFSKQQ 132 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + L QG+ F+ + + + ++ + + Sbjct: 133 YEELLRNQGLTPVIFESRVRNELLLQQLLDGYSENAITPRTTTERVQYLSEVRREISQSK 192 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 I F + + K Sbjct: 193 ITPDQFLSQAIPEEADISAYYEQHKTDFDLPERAK 227 >gi|226309691|ref|YP_002769585.1| foldase protein PrsA precursor [Brevibacillus brevis NBRC 100599] gi|226092639|dbj|BAH41081.1| putative foldase protein PrsA precursor [Brevibacillus brevis NBRC 100599] Length = 355 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 29/297 (9%), Positives = 75/297 (25%), Gaps = 9/297 (3%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL-----EKIAVQE 79 P ++ A + G +T + + + ++ + +++ Sbjct: 50 LVQFPKLTLPYAADQKAVIVEYQGGTVTGKEFEEFLRVINFMNPQQGTMIEMADSKSLKA 109 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 E + + + F + Q + Sbjct: 110 FAREFTATKVLASRSDDAMKKESKELAEKTFEKIKTQYMSFLGKDEAQFNKLMDGQGVTK 169 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + N + ++ KQ + + +V + + + Sbjct: 170 DMILNQMDLINQ-SINVMKKNIDDATLKQTYDQMDKASRTVASVRHILISTEKRTPEEAL 228 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNT 257 K D E + +F S G + + P+F+ + Sbjct: 229 KISNDLEARLKKGEDFAKLATEFTDDPGSKQSGGLYENADVTQWVPEFKEASLTQKVGEV 288 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P T G I + ++++ +K L A + + + KL + I Sbjct: 289 GPPVKTNFGYHIIKVENRKE-KTFDEMKEQLRASSLEKAYDTFAKTELDKLITKFNI 344 >gi|56707610|ref|YP_169506.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella tularensis subsp. tularensis SCHU S4] gi|110670081|ref|YP_666638.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella tularensis subsp. tularensis FSC198] gi|254370127|ref|ZP_04986133.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874430|ref|ZP_05247140.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. tularensis MA00-2987] gi|56604102|emb|CAG45101.1| Peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella tularensis subsp. tularensis SCHU S4] gi|110320414|emb|CAL08484.1| Peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella tularensis subsp. tularensis FSC198] gi|151568371|gb|EDN34025.1| hypothetical protein FTBG_01231 [Francisella tularensis subsp. tularensis FSC033] gi|254840429|gb|EET18865.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. tularensis MA00-2987] Length = 473 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 108/271 (39%), Gaps = 13/271 (4%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-----GELEKIAVQELIV 82 V + + ++ +N IT ++ + +A L+ + N L++ A+Q+LI Sbjct: 46 VSMNVSDKKYLVNKTVAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKRQALQDLIS 105 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 +++ Q E++ I + ++ A G+S E ++ G+ + +K+ + Q Sbjct: 106 QSVLLQLAERNNIMISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRDQL 165 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV------REYLIRTVLFSIPDNKLQNQG 196 + + + + EI +K + + Y ++ ++ ++PD+K Q Sbjct: 166 MISQLQQQAIAQQVYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKARQK 225 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQ 254 + K A +++F+ + VS G ++ D P + + + Sbjct: 226 KIDLFKKLALAVNDGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKELKN 285 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 + + P++ ++ I I + + ++ K Sbjct: 286 HQVSQPFIVNHTLQMIYIYNIDEKAPILSKK 316 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 26/271 (9%), Positives = 78/271 (28%), Gaps = 9/271 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + ++ +KL + + + + + + + D + V+ Sbjct: 194 QKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVNDGSIDFSEIVKQFSQ 253 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + V F++ + + I +K Sbjct: 254 APNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQ-VSQPFIVNHTLQMIYIYNIDEKAPI 312 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ + I + N+ + ++ A+ + + K+ + G Sbjct: 313 LSKKVTKYYVYAIEIKLDGGMNEDGAKSSLERAKLAIESGQEFTKVALKYNQDYDHPN-G 371 Query: 233 KAQYLLESDLHP-----QFQNLLKKSQNNTTNPYVTQK-GVEYIAICDKRDLGGEIALKA 286 +++ E D P F L + +N + P+ I ++ LK Sbjct: 372 NFKWVSELDSPPSLPPAAFAQLKQLKENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKE 431 Query: 287 Y-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ ++ ++ +A I Sbjct: 432 QKALEAIFSEKAQEIYKTWLTSMKDDAYIEI 462 >gi|322652369|gb|EFY48724.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] Length = 481 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 26/261 (9%), Positives = 71/261 (27%), Gaps = 20/261 (7%) Query: 57 SKRIALLKLQKINGELEKIA--VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 + L+ Q +L ++ + S V A+ Sbjct: 8 DQYAQALRNQLTTQQLINGVAGTDFMLKGETDELAALVSQQRVVREAVIDVNALAAKQQV 67 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 E S + + + ++ + ++ + +I A + + Sbjct: 68 TDQEVSSYYDQNKARFMTPEQFRVSYIKLDAATMQAPV------SDADIQAYYDQHVDQF 121 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGK 233 + IR + ++ + ++ ++ I + G Sbjct: 122 TQPERIRYSIIQTKTEDDAKAV---------LDALNKGEDFATLAKEKSTDIISARNGGD 172 Query: 234 AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQ 291 +L ES P+ +N K + + + G + D + + ++ ++A+ Sbjct: 173 MGWLEESATVPELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPAKVKPLSEVRDDIAAK 232 Query: 292 NTPTKIEKHEAEYVKKLRSNA 312 K +K+ A Sbjct: 233 VKQEKALDAYYALQQKVSDAA 253 >gi|172056725|ref|YP_001813185.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Exiguobacterium sibiricum 255-15] gi|259534741|sp|B1YK87|PRSA_EXIS2 RecName: Full=Foldase protein prsA; Flags: Precursor gi|171989246|gb|ACB60168.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Exiguobacterium sibiricum 255-15] Length = 304 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 29/301 (9%), Positives = 82/301 (27%), Gaps = 36/301 (11%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 +L + + + + + + G + D+ + + + +L Sbjct: 5 LLSVAAVASVFTLAACGSNDEAVINYKGGEVNKADVQDEA---YQKAGAQIAFQQTMNKL 61 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + + G V + + ++ + F++ L Sbjct: 62 LEK--------EYGKKVTDKEVEAEVKKTKDQFPDKEQFNTTLQTAGIKNEKEFEKVLRT 113 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q + + K + E+E N++K++ + Sbjct: 114 QMLLKEAKSAK--SKVTDKEIEDRFNQEKVEVKASHIL-----------------VEKES 154 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKS--QNNT 257 K ++ + ++ G Y + + +F+N K + Sbjct: 155 EAKAIKKQLDEGGDFAKIAKAKSTDTGSATKGGDLGYFTKGKMVEEFENYAFKDGVEGKI 214 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALK--AYLSAQNTPTKIEKHE-AEYVKKLRSNAII 314 ++P TQ G I + D+++ K + K + + + L + Sbjct: 215 SDPIKTQFGYHIIKVTDRKEKKDFTLEKESDRIKKALAEEKSAQVNPNDIYRSLMKKYDV 274 Query: 315 H 315 Sbjct: 275 K 275 >gi|268315855|ref|YP_003289574.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus DSM 4252] gi|262333389|gb|ACY47186.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus DSM 4252] Length = 552 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 28/299 (9%), Positives = 73/299 (24%), Gaps = 53/299 (17%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL---QKINGELEKIAVQELIVE 83 ++ + + + + G IT + L Q + L ++ ++++I E Sbjct: 3 LLLLAGCHAGSAQQTLLAEGPGVHITADAFREAYLDYLLRTGQTDSPRLRRLFLEQMIRE 62 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 L E + G+ + + + + Sbjct: 63 ALVAYEARRQGLDRTPAYEEEA------------------------------RAVETKLL 92 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + E E+ ++ +L Sbjct: 93 VEAYARRVLYDTVRVREAELAEAFVRINTEVRARHLWAP--------------TRAAAES 138 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYV 262 + + F S G + ++ P F+++ + ++P Sbjct: 139 LYARLQAGASFEELAAGVFRDTALARSGGDLGWFSFDEMDPAFEDVAFRLRPGEISSPVR 198 Query: 263 TQKGVEYIAICDK--RDL---GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 T G I + D+ + + + L K + + L + I + Sbjct: 199 TAYGYSIIQVTDRFTKPILTETEFAQKRPLLERYLRYRKQQAAREACARSLADSLQIRF 257 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 16/201 (7%), Positives = 48/201 (23%), Gaps = 13/201 (6%) Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 + + + A+ V+ E + A + + Sbjct: 339 RHVLAERARAAGLHRSPAFAQARQEALDRWLYRYVRQQVESGAAVPEDTLRAFYKAHRED 398 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIG 232 L +R + L ++ + + G Sbjct: 399 FRMPARRAV------WEILVPTEAEAQR----IRTLLTATPFEELARHYSRRPGAAATGG 448 Query: 233 KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG--EIALKAYLSA 290 ++ E+ L + + + P G + + ++ + + Sbjct: 449 YLGFVAEAQLGAAGKAVFAAREGEVLGPLRIADGYVLLKVGAEQPERPMTFEEARPLIER 508 Query: 291 QNTPTKIEKHEAEYVKKLRSN 311 Q P + + E++ +L + Sbjct: 509 QLRPFFVRRRWQEHLAELAAR 529 >gi|124266895|ref|YP_001020899.1| putative rotamase/peptidyl-prolyl cis-trans isomerase family protein [Methylibium petroleiphilum PM1] gi|124259670|gb|ABM94664.1| putative rotamase/peptidyl-prolyl cis-trans isomerase family protein [Methylibium petroleiphilum PM1] Length = 264 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 14/124 (11%), Positives = 41/124 (33%), Gaps = 4/124 (3%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN--LLKKS 253 + + + + + ++ G+ +L +D P+F + Sbjct: 128 ELRSRSRSEIDAPVAEGDRFATAAARLSNCPSGEHGGELGWLEAADCAPEFARALFGQPE 187 Query: 254 QNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 T+ G+ + + ++ + G A++A + A +++++L Sbjct: 188 LGMLPRLVHTRFGLHVVEVLQRQSGRVPGFEAVQASVRAALQRQAFATALRQHLQRLAGE 247 Query: 312 AIIH 315 A I Sbjct: 248 AHIE 251 >gi|328676627|gb|AEB27497.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) [Francisella cf. novicida Fx1] Length = 469 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 119/309 (38%), Gaps = 23/309 (7%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-------ELEKIAVQEL 80 V + + ++ +N IT ++ + +A L+ + N +L++ A+Q+L Sbjct: 40 VSMNVSDKKYLVNKTVAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKLKRQALQDL 99 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I +++ Q E++ I + ++ A G+S E ++ G+ + +K+ + Sbjct: 100 ISQSVLLQLAERNNIMISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRD 159 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV------REYLIRTVLFSIPDNKLQN 194 Q + + + + EI +K + + Y ++ ++ ++PD+K Sbjct: 160 QLMISQLQQQAIAQQVYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKAR 219 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKK 252 Q + K A +++F+ + VS G ++ D P + + + Sbjct: 220 QKKIDLFKKLALAVNDGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKEL 279 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY------LSAQNTPTKIEKHEAEYVK 306 + + P++ ++ I I + + ++ K + + + E+ ++ Sbjct: 280 KNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKKVTKYYVYAIEIKLDGSMNEEGAKSSLE 339 Query: 307 KLRSNAIIH 315 R+ I Sbjct: 340 --RAKLAIE 346 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 26/271 (9%), Positives = 78/271 (28%), Gaps = 9/271 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + ++ +KL + + + + + + + D + V+ Sbjct: 190 QKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVNDGSIDFSEIVKQFSQ 249 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + V F++ + + I +K Sbjct: 250 APNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQ-VSQPFIVNHTLQMIYIDNIDEKAPI 308 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ + I + N+ + ++ A+ + + K+ + G Sbjct: 309 LSKKVTKYYVYAIEIKLDGSMNEEGAKSSLERAKLAIESGQEFTKVALKYNQDYDHPN-G 367 Query: 233 KAQYLLESDLHP-----QFQNLLKKSQNNTTNPYVTQK-GVEYIAICDKRDLGGEIALKA 286 +++ E D P F L + +N + P+ I ++ LK Sbjct: 368 NFRWVSELDSPPSLPPAAFAQLKQLKENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKE 427 Query: 287 Y-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ ++ ++ +A I Sbjct: 428 QKALEAIFSEKAQEIYKTWLTSMKDDAYIEI 458 >gi|254372525|ref|ZP_04988014.1| hypothetical protein FTCG_00087 [Francisella tularensis subsp. novicida GA99-3549] gi|151570252|gb|EDN35906.1| hypothetical protein FTCG_00087 [Francisella novicida GA99-3549] Length = 469 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 119/309 (38%), Gaps = 23/309 (7%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-------ELEKIAVQEL 80 V + + ++ +N IT ++ + +A L+ + N +L++ A+Q+L Sbjct: 40 VSMNVSDKKYLVNKTVAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKLKRQALQDL 99 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I +++ Q E++ I + ++ A G+S E ++ G+ + +K+ + Sbjct: 100 ISQSVLLQLAERNNIMISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRD 159 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV------REYLIRTVLFSIPDNKLQN 194 Q + + + + EI +K + + Y ++ ++ ++PD+K Sbjct: 160 QLMISQLQQQAIAQQVYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKAR 219 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKK 252 Q + K A +++F+ + VS G ++ D P + + + Sbjct: 220 QKKIDLFKKLALAVNDGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKEL 279 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY------LSAQNTPTKIEKHEAEYVK 306 + + P++ ++ I I + + ++ K + + + E+ ++ Sbjct: 280 KNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKKVTKYYVYAIEIKLDGSMNEEGAKSSLE 339 Query: 307 KLRSNAIIH 315 R+ I Sbjct: 340 --RAKLAIE 346 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 26/271 (9%), Positives = 78/271 (28%), Gaps = 9/271 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + ++ +KL + + + + + + + D + V+ Sbjct: 190 QKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVNDGSIDFSEIVKQFSQ 249 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + V F++ + + I +K Sbjct: 250 APNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQ-VSQPFIVNHTLQMIYIDNIDEKAPI 308 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ + I + N+ + ++ A+ + + K+ + G Sbjct: 309 LSKKVTKYYVYAIEIKLDGSMNEEGAKSSLERAKLAIESGQEFTKVALKYNQDYDHPN-G 367 Query: 233 KAQYLLESDLHP-----QFQNLLKKSQNNTTNPYVTQK-GVEYIAICDKRDLGGEIALKA 286 +++ E D P F L + +N + P+ I ++ LK Sbjct: 368 NFRWVSELDSPPSLPPAAFAQLKQLKENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKE 427 Query: 287 Y-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ ++ ++ +A I Sbjct: 428 QKALEAIFSEKAQEIYKTWLTSMKDDAYIEI 458 >gi|331000463|ref|ZP_08324138.1| PPIC-type PPIASE domain protein [Parasutterella excrementihominis YIT 11859] gi|329571795|gb|EGG53475.1| PPIC-type PPIASE domain protein [Parasutterella excrementihominis YIT 11859] Length = 641 Score = 68.2 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 24/247 (9%), Positives = 68/247 (27%), Gaps = 16/247 (6%) Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH------ARNTGLSAEDFSSFLDK 126 + L+ + + K + ++ + V + Sbjct: 155 RDLVQDMLVNSVAQTTFVPKKTVALLNDILRETRVVRTMSFDPSSYMKDVKVSEEQIKKY 214 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + ++ ++ + + + E E+ ++ + E R Sbjct: 215 YDEHKDDYRAPESLNIQFVVMSPETVKMTAEPSEQELKDFYEQNRKKYEVEESRRAAHIL 274 Query: 187 IPDNKLQ------NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 I + + +Q K K E + K ++ ++ S G + + Sbjct: 275 IAPDANEADKAKADQDAKAKAEKILAEVKADPSKFAQLAKENSADPGTAESGGDLDFFTQ 334 Query: 240 SDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTK 296 + P+F + + ++ P T+ G I + D +++ + Sbjct: 335 GQMVPEFDKAVFGAKKDEIVGPVKTEFGYHIIHVTDINPAHVRPFEEVRSEILKFWQDQH 394 Query: 297 IEKHEAE 303 + AE Sbjct: 395 RQSMFAE 401 Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 25/312 (8%), Positives = 83/312 (26%), Gaps = 30/312 (9%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 F + ++ L+ ++ F + I Y + ++G+ I + + Sbjct: 5 FRNQKRWLMLIAMILIIPAFVFIGINGYSRLNPDANAIAKVDGKGIQPEEFDYQKREYIE 64 Query: 66 QKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109 + E +Q + + ++ + Sbjct: 65 RMRQQEGGAVDPSIFETQEANAAILQNIATRRALQAQMAHHYMNVSEADAINVIKNADAF 124 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 ++ S E + ++L +G D F L + +V + + + + + A Sbjct: 125 KKDGQFSPELYENYLAARGKSDQQFVYELRRDLVQDMLVNS--VAQTTFVPKKTVALLND 182 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + T + S + ++ ++K + ++ + + + + Sbjct: 183 ILRETRVVRTMSFDPSSYMKDVKVSEEQIKKYYDEHKDDYRAPESLNIQFVVMSPETVKM 242 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIA---ICDKRDLGGEIALKA 286 + ++ Q + +++ + + + KA Sbjct: 243 T---------AEPSEQELKDFYEQNRKKYEVEESRRAAHILIAPDANEADKAKADQDAKA 293 Query: 287 YLSAQNTPTKIE 298 K + Sbjct: 294 KAEKILAEVKAD 305 >gi|255011715|ref|ZP_05283841.1| putative exported isomerase [Bacteroides fragilis 3_1_12] gi|313149550|ref|ZP_07811743.1| peptidyl-prolyl cis-trans isomerase [Bacteroides fragilis 3_1_12] gi|313138317|gb|EFR55677.1| peptidyl-prolyl cis-trans isomerase [Bacteroides fragilis 3_1_12] Length = 517 Score = 68.2 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 32/298 (10%), Positives = 82/298 (27%), Gaps = 41/298 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + V + C+ ++ +A + ING+ I+ + + K +G K Sbjct: 1 MKKILVGALTCLFGFIA--GYARQDPVLMRINGQDISRSEFE---SFYHRNKPSGVSGKE 55 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A++ + L + Q G + Sbjct: 56 ALKVCVD--------------------------------LFVDKKLKLHAAQRAGLDTLS 83 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + A + + ++ E +MK+ ++ + +F Sbjct: 84 AFRAEMDNYHRSLSKSYLTDSSAEEACARKLYDQMKSRSISGEVRVMHIFRYLPQTALPH 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + + + + D ++ +F+ + Sbjct: 144 HLREAQALMDSLYNVLKTNPDTDFRTLVDQYSDDKAES--WISWLQTPQEFEEVAFSLKD 201 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSN 311 + P+ T KG+ + + +R+L ++ L + +K V KL+ + Sbjct: 202 GEYSQPFFTPKGLHIVKVTGRRELPPFEQIRDRLIRKLSYRPGADKGTEILVNKLKES 259 >gi|90021259|ref|YP_527086.1| peptidase M20D, amidohydrolase [Saccharophagus degradans 2-40] gi|89950859|gb|ABD80874.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Saccharophagus degradans 2-40] Length = 621 Score = 68.2 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 20/195 (10%), Positives = 48/195 (24%), Gaps = 9/195 (4%) Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 F + + ++ + E +I A ++ K V Sbjct: 208 PEQIEAYYQANQQEFSVPEKVSVDYIEISVAEIAKTIAVDEADIKAQYEQEKADFVESSE 267 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238 I + +I++ + E ++ + G L Sbjct: 268 YEIAHILI-----ADGDESASKIEEVQTQLAAGEAFETLAETYSDDFGSRETGGSLGVLT 322 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPT 295 +F+ + + + P T G +I + K+ K + Sbjct: 323 TGIFPEEFEQAVYALEEGEVSEPVTTDAGTHFIKVTSKKVEALASYEERKPEIKKAIQNL 382 Query: 296 KIEKHEAEYVKKLRS 310 + E + +L Sbjct: 383 RAESFYVDQYAELEE 397 >gi|51473852|ref|YP_067609.1| hypothetical protein RT0667 [Rickettsia typhi str. Wilmington] gi|81389996|sp|Q68W65|Y667_RICTY RecName: Full=Uncharacterized protein RT0667; Flags: Precursor gi|51460164|gb|AAU04127.1| rickettsial conserved hypothetical protein [Rickettsia typhi str. Wilmington] Length = 295 Score = 68.2 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 94/301 (31%), Gaps = 23/301 (7%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELE 73 L++ V + A + I ++N + IT + R ++ + + +L Sbjct: 4 LLLIITVFSTFNVAQASLTSIVASVNDKPITFNEFHARKKMIMVLNNVENLTSDQDKQLS 63 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +A+ LI E+L Q + ++ + +L + + Sbjct: 64 DLAINSLIDESLLFQYAGDRE--IQQDEIDNAIKSIEDRNKMPHGSLLQYLKNKSVNPES 121 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 F + + I +++ + EI V + + Sbjct: 122 FIFQIKSELIKMNILSS-LSRSVQVSNKEIDVAILSSDQKDVEILMQVFRSKDGSNKAFT 180 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 +++ R+K + + L ++ SK+ + ++ + Sbjct: 181 KMNYLKNRLKKCSDVKKTLYDKFATMQLITSKLSK-----LGGVKQTIVKDLI------- 228 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + +N + E I +C K+ L + Y+ T KI + + K +R A Sbjct: 229 PDKASNVFEVNNKFEIILVCSKKILNVTVDENNYVVNFLTNKKISQKAQKIFKNMRKKAA 288 Query: 314 I 314 I Sbjct: 289 I 289 >gi|239815915|ref|YP_002944825.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Variovorax paradoxus S110] gi|239802492|gb|ACS19559.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Variovorax paradoxus S110] Length = 261 Score = 68.2 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 39/278 (14%), Positives = 83/278 (29%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG+ + + L E++ +E++ + QE +K G+ + Sbjct: 27 AAIVNGKPVPKARMDVLAQQLAAAGRPVTPEMQGQLREEIVAREVFMQEAQKQGLDATDD 86 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 N LA Q+I + ++ + Sbjct: 87 YRNQL-------------------------------ELARQAILIRALFENYRKTSPVSD 115 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A K + + + + K + K + + Sbjct: 116 AEVKAEYDKFVAANGGKEYKARHILV----------ETEDQAKKIMADLKKGAKFEDIAK 165 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRD 277 K + + G + + P+F + ++K + TT P TQ G I + D R Sbjct: 166 KQSKDPGSGANGGDLDWANPASFVPEFSEAMIKLKKGETTPAPVKTQFGYHIIRVDDVRQ 225 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + Q T ++ +Y ++LR+ A + Sbjct: 226 AQL--PKLEEVQPQITQQLQQQRLQKYQEELRAKAKVE 261 >gi|118497158|ref|YP_898208.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella tularensis subsp. novicida U112] gi|194323456|ref|ZP_03057233.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. novicida FTE] gi|118423064|gb|ABK89454.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella novicida U112] gi|194322311|gb|EDX19792.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. novicida FTE] Length = 469 Score = 68.2 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 43/273 (15%), Positives = 110/273 (40%), Gaps = 15/273 (5%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-------ELEKIAVQEL 80 V + + ++ +N IT ++ + +A L+ + N +L++ A+Q+L Sbjct: 40 VSMNVSDKKYLVNKTVAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKLKRQALQDL 99 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I +++ Q E++ IT + ++ A G+S E ++ G+ + +K+ + Sbjct: 100 ISQSVLLQLAERNNITISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRD 159 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV------REYLIRTVLFSIPDNKLQN 194 Q + + + + EI +K + + Y ++ ++ ++PD+K Sbjct: 160 QLMISQLQQQAIAQQVYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKAR 219 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKK 252 Q + K A +++F+ + VS G ++ D P + + + Sbjct: 220 QKKIDLFKKLALAVNDGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKEL 279 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 + + P++ ++ I I + + ++ K Sbjct: 280 KNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKK 312 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 26/271 (9%), Positives = 78/271 (28%), Gaps = 9/271 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + ++ +KL + + + + + + + D + V+ Sbjct: 190 QKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVNDGSIDFSEIVKQFSQ 249 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + V F++ + + I +K Sbjct: 250 APNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQ-VSQPFIVNHTLQMIYIDNIDEKAPI 308 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ + I + N+ + ++ A+ + + K+ + G Sbjct: 309 LSKKVTKYYVYAIEIKLDGGMNEDGAKSSLERAKLAIESGQEFTKVALKYNQDYDHPN-G 367 Query: 233 KAQYLLESDLHP-----QFQNLLKKSQNNTTNPYVTQK-GVEYIAICDKRDLGGEIALKA 286 +++ E D P F L + +N + P+ I ++ LK Sbjct: 368 NFRWVSELDSPPSLPPAAFAQLKQLKENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKE 427 Query: 287 Y-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ ++ ++ +A I Sbjct: 428 QKALEAIFSEKAQEIYKTWLTSMKDDAYIEI 458 >gi|315453271|ref|YP_004073541.1| hypothetical protein HFELIS_08670 [Helicobacter felis ATCC 49179] gi|315132323|emb|CBY82951.1| putative periplasmic protein [Helicobacter felis ATCC 49179] Length = 346 Score = 68.2 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 94/279 (33%), Gaps = 32/279 (11%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 I T+N + IT I + + + AV LI++ ++ QEI++ I + + Sbjct: 93 IAITVNNDPITIYQIETQEKEHHIS------RQQAVNALILQRIQAQEIKRLKIDIEDDK 146 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 ++ AR+ G+ +DF L +GI +K L Q ++++N + Sbjct: 147 IDAEIENIARHNGMDMQDFLRTLASEGINPTTYKAQLKKQLETRELLRNILLFNTNTNSE 206 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + + ++ R D K Sbjct: 207 TKMREYYNAHKSEFSVPSEIITIRYTAQDTQALTKALENRNLDIPGVTKGEEK------- 259 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG--VEYIAICDK--RD 277 + L+PQ + +Q +T P + G I +K ++ Sbjct: 260 ---------------INIKTLNPQIAQMFLSTQEHTFTPILNAGGGNFVSFYIKEKIGKE 304 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K +++ + + +K AEY +KLR A I + Sbjct: 305 NVSFSQAKHFIANKLIEEQQDKILAEYYEKLRVKAKIKF 343 >gi|86133091|ref|ZP_01051673.1| peptidylprolyl isomerase [Polaribacter sp. MED152] gi|85819954|gb|EAQ41101.1| peptidylprolyl isomerase [Polaribacter sp. MED152] Length = 459 Score = 68.2 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 30/279 (10%), Positives = 82/279 (29%), Gaps = 13/279 (4%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQK 67 + +K + + ++ F +V + + + I ++ D DI K + + + Sbjct: 5 TTILKFIKSAILVAFFGLVSTYT-SAQIKIDGVAVVIGKNIVLDSDIEKFKQEVEVRSEG 63 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 + ++EL+ + L +T ++ + + Sbjct: 64 KIKISDCEMLEELMQQKLLAHHAVIDSVTVSDEEISSRVERSVAFFTEQFGSVDKVIKAY 123 Query: 128 GIGDNHFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 G D + +V+ + K E+ +K + Sbjct: 124 GFNDLDDLKKELYSVQSENVLIEKEQLKITDKIDVTPEEVRLYYVGLKEDGELPEFSAEI 183 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYLL 238 + K + +RI + + +D + A D + G+ + Sbjct: 184 ELAQLVIKAKPTEEENQRIINKLNELKKEIEDGANFKMKAIINSDDPGVTNNGGRYEVTK 243 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276 ES +F+ + + P+ + G + + + + Sbjct: 244 ESQFIKEFKEMAFSLDVGQVSKPFKSDFGYHLMQLHEIK 282 >gi|304405851|ref|ZP_07387509.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus curdlanolyticus YK9] gi|304345094|gb|EFM10930.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus curdlanolyticus YK9] Length = 403 Score = 68.2 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 27/280 (9%), Positives = 79/280 (28%), Gaps = 8/280 (2%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI---AVQELIVETLKKQEI 90 S + +S + T G +T+ + +K L + + A ++ + E + + + Sbjct: 82 ASNSSNSTVIATYKGGEVTEEEFTKYTTFYSLFDQSFAMYLQIPEAKEQYLKEYVGYKTL 141 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 D + + + + + ++ ++ Sbjct: 142 YDRSSEDDKKSADTEVATFIKQYNEQLTSNAEMKKTVDAAGLTE-KDVSGFYKQIVTIRK 200 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTV-LFSIPDNKLQNQGFVQKRIKDAEESR 209 + + +++ K K V I + + + K K+ + Sbjct: 201 YWERNVSDADIKAEYEKNKGGYNLVSVRHILISTVDPSTGEEKRKDEEALKIAKEVKAKL 260 Query: 210 LRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGV 267 + +++ + G + + +F+ P +Q G Sbjct: 261 DKGGDWKALANQYSDDEGSKGNGGLYENASPNSWVAEFKEAAITQPVGTVGEPVKSQYGY 320 Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + +KR+ L + Q I +++ K Sbjct: 321 HVMKV-EKRESKKFEELSEDVKTQVKTGAINTKMGDFMTK 359 >gi|134094865|ref|YP_001099940.1| putative peptidyl-prolyl cis-trans isomerase (NifM related) [Herminiimonas arsenicoxydans] gi|133738768|emb|CAL61815.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Herminiimonas arsenicoxydans] Length = 248 Score = 68.2 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 32/276 (11%), Positives = 78/276 (28%), Gaps = 47/276 (17%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 ++NG I D I + L + G K +V EL++ T+ E ++ G + Sbjct: 3 VSVNGIEIPDAAIEQE---LPHHQHAGNPLKQSVHELVLRTVLLHEADRLG--IAGAGDD 57 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + + Sbjct: 58 GRIEALFAQEVRVPDADEAACATFYRNQPQRFT--------------------------- 90 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + R +LF + + + E R+ + +++ Sbjct: 91 ----------SGELVEARHILFQVTPSVPLE-LLRETGEAVLAELRVHPERFAELAREYS 139 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAICDK--RDLG 279 + G L P+F+ + + + + T+ G+ + + + ++ Sbjct: 140 NCASGTVGGNLGQLTRGQTVPEFEALVFRLPEGELADRLLETRFGLHIVQVLRRVAGEVV 199 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 A+KA ++ + ++ +Y++ L A I Sbjct: 200 PLEAVKAQIADHLSRQAWQRAVHQYLQILVGRADIQ 235 >gi|152991687|ref|YP_001357408.1| hypothetical protein SUN_0091 [Sulfurovum sp. NBC37-1] gi|151423548|dbj|BAF71051.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 273 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 38/285 (13%), Positives = 82/285 (28%), Gaps = 33/285 (11%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEK 92 + M + + T++GE IT +I K+Q+ G ++ A+ LI + L+K+ ++ Sbjct: 15 FSHARMVNAVALTVDGEAITTNEIK------KVQRKTGMSKQQAIDLLIQDRLQKEAMK- 67 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 I T++ Q A +S L KQG + +++ + K Sbjct: 68 -SIKISEETIDAKIAQIANLNNISIPKMQKMLKKQGTSWSKYRESIRQALKKERFFKEKI 126 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 + + + +K +++ + Sbjct: 127 SRNITPPSEDQLKLYYETHKEAFAMPTSIR--------MTEYSAKSEKVLQNFLRTGSAK 178 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 K + LL T P + Sbjct: 179 GIKSISATK---------------KTKGMNPAMLSMLLSTPDGRFTKPINAGDKWVVFKV 223 Query: 273 CDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K R L + ++ + + + +Y K+++ A I Sbjct: 224 NGKQGRKLLPFEEARNAVAGRWRQEQQNQALKDYFSKMKTEANIK 268 >gi|170733279|ref|YP_001765226.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia MC0-3] gi|169816521|gb|ACA91104.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia MC0-3] Length = 645 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 24/271 (8%), Positives = 59/271 (21%), Gaps = 22/271 (8%) Query: 55 DISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 D+ + LL Q + ++ L ++ + + + R Sbjct: 135 DVERYAQLLSFQGMTPEQYQERVRYSLSLQQIPASIVSSAFTPKSLAQRLSELAAQQREV 194 Query: 114 GLSAEDFSSFLDKQGIGDNH---FKQYLAIQSIWPDVVKNDF--------MLKYGNLEME 162 S F K D + P+ + E + Sbjct: 195 QALVLKTSDFAAKVQPTDAQLTAYYDAHKQSFATPETATIQYLVYSPAAAAASAQPTEAD 254 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I E +R I + AE+ + ++ + Sbjct: 255 IKKFYDDNPTHFRTEAQVRVSHIFIAAPGSASAADKAAAKAKAEQLLADVKAHPDQFAQI 314 Query: 223 A-----SKIHDVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274 A G ++ Q + + + G + + Sbjct: 315 AQKSSQDAPSAAKGGDLGFITRGSTAGGKAFDDAAFSLKQGDVSGIVQSDLGFHILKATE 374 Query: 275 KRD--LGGEIALKAYLSAQNTPTKIEKHEAE 303 + + +K ++ K ++ Sbjct: 375 VKPAVVKPFAEVKDQIAVDLKQQYASKAFSD 405 Score = 43.9 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 20/211 (9%), Positives = 53/211 (25%), Gaps = 15/211 (7%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------GELE 73 V I ++ + S +NG IT + Q E Sbjct: 26 FVGIQGFRGFFDDSANVAAVNGHKITRVEFDGAFRQQIDQARQALGGQFDIKMFDTPEHR 85 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--QHARNTGLSAEDFSSFLDKQGIGD 131 K + LI + + E + +T N V + + Q + Sbjct: 86 KQVLDGLIQQRVLADETQHLHLTASDNAVRDALMSDPMIASLKKPDGTIDVERYAQLLSF 145 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + + + Q++ + ++ ++ ++ D Sbjct: 146 QGMTPEQYQERVRYSLSLQQIPASIVSSAFTPKSLAQRLSELAAQQREVQALVLKTSDFA 205 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q + + + ++ Sbjct: 206 AKVQPTDAQLTAYYDAHKQSFATPETATIQY 236 >gi|89256873|ref|YP_514235.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella tularensis subsp. holarctica LVS] gi|167009233|ref|ZP_02274164.1| peptidylprolyl isomerase [Francisella tularensis subsp. holarctica FSC200] gi|290953904|ref|ZP_06558525.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. holarctica URFT1] gi|295312729|ref|ZP_06803471.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. holarctica URFT1] gi|89144704|emb|CAJ80035.1| Peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella tularensis subsp. holarctica LVS] Length = 469 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 109/273 (39%), Gaps = 15/273 (5%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-------ELEKIAVQEL 80 V + + ++ +N IT ++ + +A L+ + N +L++ A+Q+L Sbjct: 40 VSMNVSDKKYLVNKTVAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKLKRQALQDL 99 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I +++ Q E++ I + ++ A G+S E ++ G+ + +K+ + Sbjct: 100 ISQSVLLQLAERNNIMISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRD 159 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV------REYLIRTVLFSIPDNKLQN 194 Q + + + + EI +K + + Y ++ ++ ++PD+K Sbjct: 160 QLMISQLQQQAIAQQVYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKAR 219 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKK 252 Q + K A +++F+ + VS G ++ D P + + + Sbjct: 220 QKKIDLFKKLALAVNNGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKEL 279 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 + + P++ ++ I I + + ++ K Sbjct: 280 KNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKK 312 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 26/271 (9%), Positives = 78/271 (28%), Gaps = 9/271 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + ++ +KL + + + + + + + + + V+ Sbjct: 190 QKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVNNGSIDFSEIVKQFSQ 249 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + V F++ + + I +K Sbjct: 250 APNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQ-VSQPFIVNHTLQMIYIDNIDEKAPI 308 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ + I + N+ + ++ A+ + + K+ + G Sbjct: 309 LSKKVTKYYVYAIEIKLDGGMNEDGAKSSLERAKLAIESGQEFTKVALKYNQDYDHPN-G 367 Query: 233 KAQYLLESDLHP-----QFQNLLKKSQNNTTNPYVTQK-GVEYIAICDKRDLGGEIALKA 286 +++ E D P F L + +N + P+ I ++ LK Sbjct: 368 NFRWVSELDSPPSLPPAAFAQLKQLKENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKE 427 Query: 287 Y-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K +K ++ ++ +A I Sbjct: 428 QKALEAIFSEKAQKIYKTWLTSMKDDAYIEI 458 >gi|254247971|ref|ZP_04941292.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia cenocepacia PC184] gi|124872747|gb|EAY64463.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia cenocepacia PC184] Length = 645 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 24/271 (8%), Positives = 59/271 (21%), Gaps = 22/271 (8%) Query: 55 DISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 D+ + LL Q + ++ L ++ + + + R Sbjct: 135 DVERYAQLLSFQGMTPEQYQERVRYSLSLQQIPASIVSSAFTPKSLAQRLSELAAQQREV 194 Query: 114 GLSAEDFSSFLDKQGIGDNH---FKQYLAIQSIWPDVVKNDF--------MLKYGNLEME 162 S F K D + P+ + E + Sbjct: 195 QALVLKTSDFAAKVQPTDAQLTAYYDAHKQSFATPETATIQYLVYSPAAAAASAQPTEAD 254 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I E +R I + AE+ + ++ + Sbjct: 255 IKKFYDDNPTHFRTEAQVRVSHIFIAAPGSASAADKAAAKAKAEQLLADVKAHPDQFAQI 314 Query: 223 A-----SKIHDVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274 A G ++ Q + + + G + + Sbjct: 315 AQKSSQDAPSAAKGGDLGFITRGSTAGGKAFDDAAFSLKQGDVSGIVQSDLGFHILKATE 374 Query: 275 KRD--LGGEIALKAYLSAQNTPTKIEKHEAE 303 + + +K ++ K ++ Sbjct: 375 VKPAVVKPFAEVKDQIAVDLKQQYASKAFSD 405 Score = 44.3 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 20/211 (9%), Positives = 54/211 (25%), Gaps = 15/211 (7%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------GELE 73 V I ++ + S +NG IT + Q E Sbjct: 26 FVGIQGFRGFFDDSANVAAVNGHKITRVEFDGAFRQQIDQARQALGGQFDIKMFDTPEHR 85 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--QHARNTGLSAEDFSSFLDKQGIGD 131 K + LI + + E ++ +T N V + + Q + Sbjct: 86 KQVLDGLIQQRVLADETQRLHLTASDNAVRDALMSDPMIASLKKPDGTIDVERYAQLLSF 145 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + + + Q++ + ++ ++ ++ D Sbjct: 146 QGMTPEQYQERVRYSLSLQQIPASIVSSAFTPKSLAQRLSELAAQQREVQALVLKTSDFA 205 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q + + + ++ Sbjct: 206 AKVQPTDAQLTAYYDAHKQSFATPETATIQY 236 >gi|254373986|ref|ZP_04989468.1| peptidyl-prolyl cis-trans isomerase [Francisella novicida GA99-3548] gi|151571706|gb|EDN37360.1| peptidyl-prolyl cis-trans isomerase [Francisella novicida GA99-3548] Length = 469 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 120/309 (38%), Gaps = 23/309 (7%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-------ELEKIAVQEL 80 + + + ++ +N IT ++ + +A L+ + N +L++ A+Q+L Sbjct: 40 ISMNVSDKKYLVNKTVAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKLKRQALQDL 99 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I +++ Q E++ IT + ++ A G+S E ++ G+ + +K+ + Sbjct: 100 ISQSVLLQLAERNNITISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRD 159 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV------REYLIRTVLFSIPDNKLQN 194 Q + + + + EI +K + + Y ++ ++ ++PD+K Sbjct: 160 QLMISQLQQQAIAQQVYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKAR 219 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKK 252 Q + K A +++F+ + VS G ++ D P + + + Sbjct: 220 QKKIDLFKKLALAVNDGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKEL 279 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY------LSAQNTPTKIEKHEAEYVK 306 + + P++ ++ I I + + ++ K + + + E+ ++ Sbjct: 280 KNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKKVTKYYVYAIEIKLDGSMNEEGAKSSLE 339 Query: 307 KLRSNAIIH 315 R+ I Sbjct: 340 --RAKLAIE 346 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 26/271 (9%), Positives = 78/271 (28%), Gaps = 9/271 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + ++ +KL + + + + + + + D + V+ Sbjct: 190 QKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVNDGSIDFSEIVKQFSQ 249 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + V F++ + + I +K Sbjct: 250 APNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQ-VSQPFIVNHTLQMIYIDNIDEKAPI 308 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ + I + N+ + ++ A+ + + K+ + G Sbjct: 309 LSKKVTKYYVYAIEIKLDGSMNEEGAKSSLERAKLAIESGQEFTKVALKYNQDYDHPN-G 367 Query: 233 KAQYLLESDLHP-----QFQNLLKKSQNNTTNPYVTQK-GVEYIAICDKRDLGGEIALKA 286 +++ E D P F L + +N + P+ I ++ LK Sbjct: 368 NFRWVSELDSPPSLPPAAFAQLKQLKENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKE 427 Query: 287 Y-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ ++ ++ +A I Sbjct: 428 QKALEAIFSEKAQEIYKTWLTSMKDDAYIEI 458 >gi|269925897|ref|YP_003322520.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermobaculum terrenum ATCC BAA-798] gi|269789557|gb|ACZ41698.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermobaculum terrenum ATCC BAA-798] Length = 398 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 35/323 (10%), Positives = 83/323 (25%), Gaps = 45/323 (13%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL---- 65 I ++ ++++ I + + SR + E I D + + + L Sbjct: 32 RLIISVVAIALLIVVLIIAVPLIKQYLWEPSRTLAVVGNERIRKADYDQYVKMQVLGITD 91 Query: 66 ------------QKINGELEKIA------------------VQELIVETLKKQEIEKSGI 95 + + + ++I + Q K GI Sbjct: 92 APESLASLYQVYKTDPESFPQRVKDAINSSMFSTSDVDAYTLDQMINNLVLNQTASKLGI 151 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD-VVKNDFML 154 V + G SA S + + + + +D+ Sbjct: 152 NISDQEVQAKIREIMSVVGASATPTSLPTTTTPSATSTPQAKSTPRITPTAATLPSDYQN 211 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV-------QKRIKDAEE 207 +L+ + ++ VR LIR K Q V +++ ++ + Sbjct: 212 FVSSLQKSAGISMDMYASMLVRPALIRQRYLETKVPKSAEQVHVRHILVSTKQQAEEVIK 271 Query: 208 SRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQ 264 + K ++ + + G + F++ + P T Sbjct: 272 ELRQGKKFEVIAKEKSIDDQTKLKGGDLGWAPRGIYEKSFEDAAFALTKVGQISPPVQTS 331 Query: 265 KGVEYIAICDKRDLGGEIALKAY 287 G I + + + Sbjct: 332 YGWHVIQLLGREKDRPLTETQRQ 354 >gi|115315252|ref|YP_763975.1| peptidylprolyl isomerase [Francisella tularensis subsp. holarctica OSU18] gi|169656704|ref|YP_001429113.2| hypothetical protein FTA_1682 [Francisella tularensis subsp. holarctica FTNF002-00] gi|254368149|ref|ZP_04984169.1| peptidylprolyl isomerase [Francisella tularensis subsp. holarctica 257] gi|115130151|gb|ABI83338.1| peptidylprolyl isomerase [Francisella tularensis subsp. holarctica OSU18] gi|134253959|gb|EBA53053.1| peptidylprolyl isomerase [Francisella tularensis subsp. holarctica 257] gi|164551772|gb|ABU62157.2| hypothetical protein FTA_1682 [Francisella tularensis subsp. holarctica FTNF002-00] Length = 475 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 109/273 (39%), Gaps = 15/273 (5%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-------ELEKIAVQEL 80 V + + ++ +N IT ++ + +A L+ + N +L++ A+Q+L Sbjct: 46 VSMNVSDKKYLVNKTVAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKLKRQALQDL 105 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I +++ Q E++ I + ++ A G+S E ++ G+ + +K+ + Sbjct: 106 ISQSVLLQLAERNNIMISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRD 165 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV------REYLIRTVLFSIPDNKLQN 194 Q + + + + EI +K + + Y ++ ++ ++PD+K Sbjct: 166 QLMISQLQQQAIAQQVYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKAR 225 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKK 252 Q + K A +++F+ + VS G ++ D P + + + Sbjct: 226 QKKIDLFKKLALAVNNGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKEL 285 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 + + P++ ++ I I + + ++ K Sbjct: 286 KNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKK 318 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 26/271 (9%), Positives = 78/271 (28%), Gaps = 9/271 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + ++ +KL + + + + + + + + + V+ Sbjct: 196 QKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVNNGSIDFSEIVKQFSQ 255 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + V F++ + + I +K Sbjct: 256 APNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQ-VSQPFIVNHTLQMIYIDNIDEKAPI 314 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ + I + N+ + ++ A+ + + K+ + G Sbjct: 315 LSKKVTKYYVYAIEIKLDGGMNEDGAKSSLERAKLAIESGQEFTKVALKYNQDYDHPN-G 373 Query: 233 KAQYLLESDLHP-----QFQNLLKKSQNNTTNPYVTQK-GVEYIAICDKRDLGGEIALKA 286 +++ E D P F L + +N + P+ I ++ LK Sbjct: 374 NFRWVSELDSPPSLPPAAFAQLKQLKENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKE 433 Query: 287 Y-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K +K ++ ++ +A I Sbjct: 434 QKALEAIFSEKAQKIYKTWLTSMKDDAYIEI 464 >gi|268316846|ref|YP_003290565.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus DSM 4252] gi|262334380|gb|ACY48177.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus DSM 4252] Length = 291 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 30/277 (10%), Positives = 77/277 (27%), Gaps = 25/277 (9%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 + + +T ++++ + LL +Q + E + +++ I L QE + G+ D Sbjct: 24 DVVARVGQVYLTREELARALQLLPVQMDSTEASQQVIEQWITNQLLYQEALRRGLRNDPE 83 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + + ++ G + + + E Sbjct: 84 VQRLLEENERSVLISALLEQLYQEEEAGEEGQPGPAEV-------QAYYERYKEQLRLRE 136 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + RT+ E R ++ + Sbjct: 137 PYVRVRYLHTTREEDARTVHRTLQ-----------ETRAVLDSLWEALVDRYAENPEEAR 185 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 A + S + L P + L + + + + ++ G Sbjct: 186 LLAGRYFPESR----LFTAAVLAPLREALQRLRNGDVAPIIEIDGHYHVLQLVERLPAGT 241 Query: 281 EIALK---AYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 L+ ++ Q ++ A V++LR+ A + Sbjct: 242 LPELRWIYDEVAQQARIQARKQIYARLVQRLRNEARV 278 >gi|197104155|ref|YP_002129532.1| hypothetical protein PHZ_c0689 [Phenylobacterium zucineum HLK1] gi|196477575|gb|ACG77103.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 266 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 23/241 (9%), Positives = 61/241 (25%), Gaps = 6/241 (2%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I L QE + T L E L + Sbjct: 6 IDSRLIAQESQNHPSGDPMETWTAAARALVVRQLLLTEARRRGLSPDPEAVGENQYETDE 65 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 +S+ V++ + + + K +T + +L + + Sbjct: 66 ESLVRQVLEVAVEPQPPSETECRRVYEGMKGKFVTPTLFEASHILIEPAGEAEADWSEAE 125 Query: 200 KRIKDAEESRLRLPKDCNKLEKF-ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 + P+ + +S G + +L Q ++ + T Sbjct: 126 AEARALIGVVGDSPQAFAEAAAARSSCPTAHQGGSLGQVRRGELVDSVQAAIEALADGET 185 Query: 259 N--PYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P + G + + + + + ++ + +++V L + + + Sbjct: 186 GTAPVRSPFGWHVVRLERRIEGRVLPYEIVEGRIRDMLEARAWAIGASQFVADLAAKSAV 245 Query: 315 H 315 Sbjct: 246 E 246 >gi|312961518|ref|ZP_07776019.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas fluorescens WH6] gi|311284197|gb|EFQ62777.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas fluorescens WH6] Length = 301 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 22/239 (9%), Positives = 69/239 (28%), Gaps = 5/239 (2%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + L E + + V A + E + + G+ + Sbjct: 49 VNGVLVTPEAMALELQYHPAESREAAVYLAARALVIRELLQQRIAELGLAVDIAPGENEE 108 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGFV- 198 ++ +++ + + + + + + +R +L + ++ + Sbjct: 109 EAATRLLLEREVKVPECDEATCLRYFDNNRGRFHSAPLLAVRHILLECAPDDIEARDLAH 168 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 + + + K+++ G + + P+ + L Sbjct: 169 SQAEVLLLSLEEQPGQFAELALKYSACPSKAQGGSLGQVSKGQTVPELERQLFTLAPGLA 228 Query: 259 N-PYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P ++ G I++ + + A+ + Q +K +Y++ L A I Sbjct: 229 GKPLESRYGWHVISVDQRIEGQPLPYEAVAVAIRTQLQQGVWQKALVQYLQTLIGAADI 287 >gi|312597426|pdb|3NRK|A Chain A, The Crystal Structure Of The Leptospiral Hypothetical Protein Lic12922 Length = 325 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 92/306 (30%), Gaps = 18/306 (5%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKR-------IALLKLQKINGELEKIAVQEL 80 + +R+ T+ I++ D+ LK + + L Sbjct: 2 AGSAAAPFTESLNRVIATVGTVSISELDLDDATEKYNRLQKHLKHEDYRKSFRTRIIDFL 61 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG--LSAEDFSSFLDKQGIGDNHFKQYL 138 I + E+ I + V+ + G + + G+ + L Sbjct: 62 IDRAIVDVVAEEESIQVNEQRVDSEIEKRMEVMGITNRKQFEKTMETSSGMPFELWVTEL 121 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 Q +++ + E EI + + K+ E R + + ++ +Q + + Sbjct: 122 PYQIKKGQLLQLKIAV-PPPNEQEIRSWYNQNKDKVGFEIRYRIISIAPENDSIQEENRL 180 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQNLL----KK 252 K + + +S L P + + G +++ DL+ + Sbjct: 181 YKEVSEIRKSILADPSSFALIAGSPRNDPALRARRGMVEWISSFDLYKYSKITATIAAPL 240 Query: 253 SQNNTTNPYVTQKG-VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + ++ + I KR L+ + K E ++K+ R+ Sbjct: 241 PNGGVSEVFRDERKRYCILKIEGKRPTPM-ENLRGGIQNILYRDKEEDTFHRWLKESRAE 299 Query: 312 AIIHYY 317 I + Sbjct: 300 IPIQIF 305 >gi|325285384|ref|YP_004261174.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cellulophaga lytica DSM 7489] gi|324320838|gb|ADY28303.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cellulophaga lytica DSM 7489] Length = 475 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 35/295 (11%), Positives = 97/295 (32%), Gaps = 14/295 (4%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLK 86 I S + + VI D DI K + L+ Q ++ + + + +L+ + L Sbjct: 41 TIKSNFKRIKLDGVSAVVGDYVILDSDIEKTLIDLRSQGVSEDDITKCGLLGKLMEDRLY 100 Query: 87 KQEIEKSGITFDSNTVN----YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + + + VN G + + + Sbjct: 101 AHQAVQDSLLVSDDEVNATSERQIQSLVGQIGSMDKLLKYYKKDSQEALREDLFKINKLR 160 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + ++ + + E+ +K+ + + + I ++ QK I Sbjct: 161 MLSEKMQQKIIEEIEITPEEVRQFYKKIPKEERPVFGAQLEIAQIVKQPEASEEEKQKVI 220 Query: 203 KDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256 + R + + + A + + G + E++ +F+++ + Sbjct: 221 DKLNKIREDVLVGGSSFKIKAIISSEDEGSRSNGGFYKIKKETNFVKEFKDVAFSLKEGE 280 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + P+ TQ G I + + + ++ + + ++E+ E ++K+R Sbjct: 281 VSEPFETQFGFHIIYLEKIKGQERD-VRHILMAPKISDERLEEARLE-LEKIRQR 333 >gi|187932060|ref|YP_001892045.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella tularensis subsp. mediasiatica FSC147] gi|187712969|gb|ACD31266.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella tularensis subsp. mediasiatica FSC147] Length = 469 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 109/273 (39%), Gaps = 15/273 (5%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-------ELEKIAVQEL 80 V + + ++ +N IT ++ + +A L+ + N +L++ A+Q+L Sbjct: 40 VSMNVSDKKYLVNKTVAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKLKRQALQDL 99 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I +++ Q E++ I + ++ A G+S E ++ G+ + +K+ + Sbjct: 100 ISQSVLLQLAERNNIMISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRD 159 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV------REYLIRTVLFSIPDNKLQN 194 Q + + + + EI +K + + Y ++ ++ ++PD+K Sbjct: 160 QLMISQLQQQAIAQQVYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKAR 219 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKK 252 Q + K A +++F+ + VS G ++ D P + + + Sbjct: 220 QKKIDLFKKLALAVNDGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKEL 279 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 + + P++ ++ I I + + ++ K Sbjct: 280 KNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKK 312 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 26/271 (9%), Positives = 78/271 (28%), Gaps = 9/271 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + ++ +KL + + + + + + + D + V+ Sbjct: 190 QKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVNDGSIDFSEIVKQFSQ 249 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + V F++ + + I +K Sbjct: 250 APNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQ-VSQPFIVNHTLQMIYIDNIDEKAPI 308 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ + I + N+ + ++ A+ + + K+ + G Sbjct: 309 LSKKITKYYVYAIEIKLDGGMNEDGAKSSLERAKLAIESGQEFTKVALKYNQDYDHPN-G 367 Query: 233 KAQYLLESDLHP-----QFQNLLKKSQNNTTNPYVTQK-GVEYIAICDKRDLGGEIALKA 286 +++ E D P F L + +N + P+ I ++ LK Sbjct: 368 NFRWVSELDSPPSLPPAAFAQLKQLKENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKE 427 Query: 287 Y-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ ++ ++ +A I Sbjct: 428 QKALEAIFSEKAQEIYKTWLTSMKDDAYIEI 458 >gi|93006476|ref|YP_580913.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter cryohalolentis K5] gi|92394154|gb|ABE75429.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter cryohalolentis K5] Length = 624 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 46/397 (11%), Positives = 101/397 (25%), Gaps = 86/397 (21%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 K+ L + + L ++ + SY + + I + + Sbjct: 1 MDKLRDFLKSWPGRILLILCLSPLALLGVESYFGGNVDPNQIAQVGEASIGLSEYQTAVN 60 Query: 62 LLK----------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 + L + ++ LI TL +Q+ K G+T +T+N Q Sbjct: 61 NRRTELLDQVDDASLLNEDVLHEQVLKGLIDRTLLEQQAGKLGMTVSDDTINRLLRQEEI 120 Query: 112 NTG----LSAEDFSSFLDKQGIGDNHFKQYLAIQ-------------------------- 141 G S + F+SFL ++ + N Q Sbjct: 121 FKGADGEFSNDQFASFLRQRNMTKNQLFDEFRNQLSLDQLNASIVGTAAYPMKAVSQLIN 180 Query: 142 -------SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 D++ K + +I A K+ ++ + +Q Sbjct: 181 LQLEARNIWLHRFNWQDYVSKVKLSKNDIQAYYDANKDTLKSAAMVDLAYLQLSPQTIQV 240 Query: 195 QG---------------------------------FVQKRIKDAEESRLRLPKDCNKLEK 221 + R + + + Sbjct: 241 NEVTKEDLQQQYEAYKQSLAVVDERKISQILLTGSDAKARADKIKARLAKGEAFAKVAKA 300 Query: 222 FASKIHDVSIGKAQYLLE----SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD--K 275 + + G +D + L S + + P T G + + + Sbjct: 301 ESDDPSGETGGDIGRFNPSVFGNDAAAVEKALEGLSVGDISVPVKTSFGYQIFTVTEDNG 360 Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + +++ L A+ K ++ A+ V + A Sbjct: 361 NKIPSLESMRDDLIAKAKEYKRQEIYADKVTAINDLA 397 >gi|332521072|ref|ZP_08397530.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lacinutrix algicola 5H-3-7-4] gi|332043165|gb|EGI79362.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lacinutrix algicola 5H-3-7-4] Length = 676 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 33/259 (12%), Positives = 74/259 (28%), Gaps = 5/259 (1%) Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 L K+ L + A L E + K + + + ++ Sbjct: 137 NYLNDSKVTDALVEEAYARLANEIKASHILVKIDQDASPKDTLAAYNEILKLRERVVQEG 196 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + +V Y +I + V + Sbjct: 197 YKKVQSDVHNGKTIFAEDLGYFSAFKMVYPFENAAYNTKVNDISMPFKTRFGYHVVKVFD 256 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLE 239 + +++IK+ + + + ++F+ G+ + Sbjct: 257 KRKSQGEITVAHIMIENDEEKIKEIYKRLEQGEQFQALAKQFSEDKSSSSKGGELKPFSG 316 Query: 240 SDLH-PQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 L P+F+ + K+ + + P+ TQ G + + +K+ L +KA L + Sbjct: 317 GQLSSPEFEAVAFAIKNPGDYSKPFKTQFGWHIVKLINKKPLPDFKEIKAELINKIRRDS 376 Query: 297 IEKHEAE-YVKKLRSNAII 314 K + VK L+ I Sbjct: 377 RSKVINDSRVKALKEKYKI 395 >gi|128298|sp|P14890|NIFM_AZOVI RecName: Full=Protein nifM gi|142367|gb|AAA64732.1| nifM protein [Azotobacter vinelandii] Length = 292 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 25/249 (10%), Positives = 70/249 (28%), Gaps = 8/249 (3%) Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 L ++ I Q I + + + + + H + S E Sbjct: 30 LSEDQLQQADRIIGRQRHIEDAVLR--SPDAIGVVIPPSQLEEAWAHIASRYESPEALQQ 87 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIR 181 LD Q + + LA + V+ + ++ Sbjct: 88 ALDAQALDAAGMRAMLARELRVEAVLDCVCAGLPEISDTDVSLYYFNHAEQFKVPAQHKA 147 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP--KDCNKLEKFASKIHDVSIGKAQYLLE 239 +L +I ++ +N + + RLR + + K + + G ++ Sbjct: 148 HILVTINEDFPENTREAARTRIETILKRLRGKPERFAEQAMKHSECPTAMQGGLLGEVVP 207 Query: 240 SDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTK 296 L+P+ + ++ + + G + + L + + Sbjct: 208 GTLYPELDACLFQMARGELSPVLESPIGFHVLYCESVSPARQLTLEEILPRLRDRLQLRQ 267 Query: 297 IEKHEAEYV 305 + ++ +++ Sbjct: 268 RKAYQRKWL 276 >gi|303257878|ref|ZP_07343887.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderiales bacterium 1_1_47] gi|302859221|gb|EFL82303.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderiales bacterium 1_1_47] Length = 645 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 24/247 (9%), Positives = 68/247 (27%), Gaps = 16/247 (6%) Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH------ARNTGLSAEDFSSFLDK 126 + L+ + + K + ++ + V + Sbjct: 159 RDLVQDMLVNSVAQTTFVPKKTVALLNDILRETRVVRTMSFDPSSYMKDVKVSEEQIKKY 218 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + ++ ++ + + + E E+ ++ + E R Sbjct: 219 YDEHKDDYRAPESLNIQFVVMSPETVKMTAEPSEQELKDFYEQNRKKYEVEESRRAAHIL 278 Query: 187 IPDNKLQ------NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 I + + +Q K K E + K ++ ++ S G + + Sbjct: 279 IAPDANEADKAKADQDAKAKAEKILAEVKADPSKFAQLAKENSADPGTAESGGDLDFFTQ 338 Query: 240 SDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTK 296 + P+F + + ++ P T+ G I + D +++ + Sbjct: 339 GQMVPEFDKAVFGAKKDEIVGPVKTEFGYHIIHVTDINPAHVRPFEEVRSEILKFWQDQH 398 Query: 297 IEKHEAE 303 + AE Sbjct: 399 RQSMFAE 405 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 27/320 (8%), Positives = 85/320 (26%), Gaps = 33/320 (10%) Query: 1 MTSKVFTSL---SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS 57 M +F S ++ L+ ++ F + I Y + ++G+ I + Sbjct: 1 MRIIMFQSFRNQKRWLMLIAMILIIPAFVFIGINGYSRLNPDANAIAKVDGKGIQPEEFD 60 Query: 58 KRIALLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + E +Q + + ++ + Sbjct: 61 YQKREYIERMRQQEGGAVDPSIFETQEANAAILQNIATRRALQAQMAHHYMNVSEADAIN 120 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 ++ S E + ++L +G D F L + +V + + + + Sbjct: 121 VIKNADAFKKDGQFSPELYENYLAARGKSDQQFVYELRRDLVQDMLVNS--VAQTTFVPK 178 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + A + T + S + ++ ++K + ++ + Sbjct: 179 KTVALLNDILRETRVVRTMSFDPSSYMKDVKVSEEQIKKYYDEHKDDYRAPESLNIQFVV 238 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIA---ICDKRDL 278 + + ++ ++ Q + +++ + + Sbjct: 239 MSPETVKMT---------AEPSEQELKDFYEQNRKKYEVEESRRAAHILIAPDANEADKA 289 Query: 279 GGEIALKAYLSAQNTPTKIE 298 + KA K + Sbjct: 290 KADQDAKAKAEKILAEVKAD 309 >gi|239616790|ref|YP_002940112.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Kosmotoga olearia TBF 19.5.1] gi|239505621|gb|ACR79108.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Kosmotoga olearia TBF 19.5.1] Length = 673 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 25/244 (10%), Positives = 74/244 (30%), Gaps = 11/244 (4%) Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 ++ + + +LI + + +K I + +N + S E++ + +++ Sbjct: 111 DVRYMVLLDLIDQKILIYYAKKHNIYPTEDEINTRVEEIVSKY-TSDENYKAQIEQYYGS 169 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 FK+ + + + +++ ++ ++ K+ +Y + + Sbjct: 170 VEAFKEKVRKSIFPSVLKEKVQNDVLKDVDQKLKTYFEENKDEIKNKYERVEASHILLTS 229 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL 249 + E + +F+ V G + +F++ Sbjct: 230 EASALELK-------NELLNGAINFSDAASEFSIDRNSAVLGGSLGSFGHGQMVKEFEDA 282 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSAQNTPTKIEKHEAEYVKK 307 + P T+ G I + K LK + Q ++ + Sbjct: 283 AFSATPGEIVGPVETKYGFHLIKVATKTVFDTFDELKSSSAYDQFKNDYESDEFKKWFEN 342 Query: 308 LRSN 311 ++N Sbjct: 343 YKNN 346 >gi|307729660|ref|YP_003906884.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1003] gi|307584195|gb|ADN57593.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1003] Length = 646 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 27/263 (10%), Positives = 68/263 (25%), Gaps = 17/263 (6%) Query: 52 TDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 T +R+ + Q++ ++ A +TL + E + + + + +A Sbjct: 149 TPDQYDERVRYSIATQELPASIQGSAFTS---KTLAQHLTELAEQQREVQGIAFHPRDYA 205 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + ++ D + E ++ + Sbjct: 206 AKIQPTDAQLQAYYDAHRNDFATPATATIQYLVMSP---ATLAASVQPSEADLKKYYDEN 262 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH--- 227 E +R I K + K + AEE ++ ++ + A + Sbjct: 263 IAHYRTEGQVRASHILIAAPKDASAADKAKAKQKAEELLAQIKAHPDQFAQIAQQNSQDP 322 Query: 228 --DVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GG 280 G Y + + ++ + T G I D + Sbjct: 323 GSASKGGDLGYFGRGMIAGGQAFDDAVFALKKDEVSGIVQTDFGYHIIKATDVKPAVTRP 382 Query: 281 EIALKAYLSAQNTPTKIEKHEAE 303 +K ++ K ++ Sbjct: 383 FDEVKEQIARDLKTQLASKAFSD 405 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 20/228 (8%), Positives = 57/228 (25%), Gaps = 15/228 (6%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 + + ++ V I ++ + S ++NG IT + + + Sbjct: 9 KRLMMFMLILVIVPGLGFVGIQGFRGFFDESANVASVNGHKITRVEYDNAMRQQLDRARQ 68 Query: 70 -------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQHARNTG 114 E + LI + + E ++ +T + V + Sbjct: 69 MLGAQFDIKAFDTPERRSQMLDGLIEQRVLADETQRLHLTASDDAVRRVLLNDPVISSLK 128 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 KQ + + + + + Q + + Sbjct: 129 KPDGSIDVERYKQLLAMQGMTPDQYDERVRYSIATQELPASIQGSAFTSKTLAQHLTELA 188 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++ ++ + F D + Q + + R ++ Sbjct: 189 EQQREVQGIAFHPRDYAAKIQPTDAQLQAYYDAHRNDFATPATATIQY 236 >gi|242237960|ref|YP_002986141.1| nitrogen fixation protein NifM [Dickeya dadantii Ech703] gi|242130017|gb|ACS84319.1| nitrogen fixation protein NifM [Dickeya dadantii Ech703] Length = 279 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 15/243 (6%), Positives = 59/243 (24%), Gaps = 9/243 (3%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + + ++L + +Q + ++ + + + +++ Sbjct: 28 PPQHQDDFQRQLARQCRLEQAVVEAALCQSLTVTDDVLQLIEQQLAEPLAQAGFAPEERQ 87 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 H + + + +Q E + L Sbjct: 88 AVIRHHA------LMELQLTWVAAQAAAPTGQDVALWYRQHADRFLRPEQRLTHHLLLTA 141 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 +++ + + +++ + G ++ L + + Sbjct: 142 EDERTAALVRAQIRGFHRTLCREPAQFERLARRYSHCPSALEGGLLGWVSRGLLFSELEQ 201 Query: 249 L-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYV 305 + + P T+ G + R E +S + + + +++ Sbjct: 202 SLFMLREGQVSEPVETEIGWHLLWCEAIRPEAPLPESEALPKVSDYLLRQRQRQQQRQWL 261 Query: 306 KKL 308 L Sbjct: 262 ATL 264 >gi|260437280|ref|ZP_05791096.1| foldase protein PrsA [Butyrivibrio crossotus DSM 2876] gi|292810590|gb|EFF69795.1| foldase protein PrsA [Butyrivibrio crossotus DSM 2876] Length = 239 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 32/273 (11%), Positives = 70/273 (25%), Gaps = 46/273 (16%) Query: 46 INGEVITDGDISKRIALLKLQKIN----GELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 I ITD +I + IA L ++ L E + D+ Sbjct: 3 IGNYNITDKEIDQYIATLAPEQQMYKDVPAFRDQVKSRL-EEISLFAMEGEEKHLDDTEE 61 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 R+ + + + + + Sbjct: 62 YKNTLSVVRRD------------------------------VLGQLAMAEIINDVDVTDE 91 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 E+ + K R + + N+ + + ++ Sbjct: 92 EVKDYYENHKEQFGRAASVSASHILVDSEDRCNEIKSE--------IENGGKSFEDAAKE 143 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG- 279 +++ S G + + +F++ N P T+ G I + ++ D Sbjct: 144 YSTCPSGKSGGSLGTFGKGQMVKEFEDASFNGELNKILGPVKTKFGYHLIRVDEREDASV 203 Query: 280 -GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + A K +K E V +LR+ Sbjct: 204 MPFEQVADKVKAAAKRAKQQKVYDENVARLRAK 236 >gi|254469068|ref|ZP_05082474.1| foldase protein PrsA, putative [beta proteobacterium KB13] gi|207087878|gb|EDZ65161.1| foldase protein PrsA, putative [beta proteobacterium KB13] Length = 257 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 58/177 (32%), Gaps = 15/177 (8%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 ++ + + +K + E A K K +EY + +L + G ++ Sbjct: 92 MEMAYTEYLKKYIKEHPISNEDIDLAYKNFTKQFNEQEYKGQHILVKTKNEAESLIGKIE 151 Query: 200 KRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNT 257 + + F+ K G + D+ F N +K N Sbjct: 152 -----------NGNEFSELAKNFSIDKASAEKGGDLDWFRLEDMVESFANEIKNLQINEL 200 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + TQ G + DK+ L + + ++ ++K+L+ NA I Sbjct: 201 SGAFQTQFGWHVFKLTDKKPLTPPELS--EIKKRLEDDLKKRKLKNHIKELKQNAEI 255 >gi|110834075|ref|YP_692934.1| peptidyl-prolyl isomerase [Alcanivorax borkumensis SK2] gi|110647186|emb|CAL16662.1| peptidylprolyl isomerase [Alcanivorax borkumensis SK2] Length = 643 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 32/274 (11%), Positives = 81/274 (29%), Gaps = 16/274 (5%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQE------LIVETLKKQEIEKSGITFDSNTVNYFF 106 + R + Q L + ++E + + E+ + + + + Sbjct: 133 RFERELRARGMNPQTYVQGLRQDMLKEQFRAGFMQTDFSLPLELNEQRRLGEQSRDIRYV 192 Query: 107 VQHARN-TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + F + + + ++ + + + + E+ A Sbjct: 193 QLDIDSLRKQFTVSDEDVKAFYDDNQGEFMRPEEFKVSYVELSADKYTDQVSVTDEEVEA 252 Query: 166 NKQKMKNITVR----EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 K+I + I N ++ + R ++A ++ + + Sbjct: 253 EYDVRKSIMEEAGAGDARRHVSHILIELNDDRDLDQAKARAREAAKAIADGASFADVAAQ 312 Query: 222 FASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL- 278 ++ + S G+ + + L + + + + S + P VT GV I + + Sbjct: 313 YSDDLGSAQSGGELGVVSKGALPEEMETAIAELSPGTVSAPVVTDAGVHLIFVTQEDTAT 372 Query: 279 --GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 L + A T + E E V KL Sbjct: 373 ALPSLADLSDQIRADLTKARAESLLNEDVSKLEE 406 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 27/239 (11%), Positives = 75/239 (31%), Gaps = 17/239 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI- 60 + + + + +++ F I Y + + + G IT G +++R+ Sbjct: 1 MQEFRRFVRGPVGKVLLAAIILPFVISGFYGYFVGGSTGDVVAEVEGSKITRGVVNQRVE 60 Query: 61 ---ALLKLQKINGELE--------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ- 108 +L+ Q N ++ + ++ E L E+S + F V + Sbjct: 61 RVRNMLREQSPNMNPALLDSFVRPEMVLDGIVNEQLILSAAEQSNMVFSEKQVAADIYKV 120 Query: 109 --HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + S + F L +G+ + Q L + + Sbjct: 121 PLFQVDGKFSEQRFERELRARGMNPQTYVQGLRQDMLKEQFRAGFMQTDFSLPLE--LNE 178 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 ++++ + ++ + S+ + V+ D + +R + + ++ Sbjct: 179 QRRLGEQSRDIRYVQLDIDSLRKQFTVSDEDVKAFYDDNQGEFMRPEEFKVSYVELSAD 237 >gi|115360451|ref|YP_777588.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria AMMD] gi|115285779|gb|ABI91254.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria AMMD] Length = 262 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 19/181 (10%), Positives = 51/181 (28%), Gaps = 5/181 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + +++ + + + R ++ ++ Sbjct: 69 DDATVDALLECELTHVPEPDRADCERYYAQHPARFRRNDIVYASHVLFAVTDRVPLAPLR 128 Query: 200 KRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NN 256 +R + A + P + ++ G LL D P+F+ L + Sbjct: 129 QRAERALADVVAAPDTFEAVARESSNCPSAQVGGSLGQLLRGDTVPEFEAALFDTDGLGV 188 Query: 257 TTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T+ G + I + + ++A + ++ +YV L + A + Sbjct: 189 LPKLVDTRFGFHIVRIERRIPGDVVPFDEAAGQIAAYLSERVRQRAMRQYVAILAAGARV 248 Query: 315 H 315 Sbjct: 249 E 249 >gi|294672824|ref|YP_003573440.1| peptidylprolyl isomerase domain-containing protein [Prevotella ruminicola 23] gi|294472529|gb|ADE81918.1| peptidylprolyl isomerase domain protein [Prevotella ruminicola 23] Length = 477 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 30/299 (10%), Positives = 80/299 (26%), Gaps = 38/299 (12%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + + + T+ G ++ + + Sbjct: 1 MRQLTIALSLFAAITSQQTLAQTTDPVVMTVAGVPVSRSEFEYSYN--------KNNGEG 52 Query: 76 AVQEL-IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + +L + E + K + + + + + Sbjct: 53 VIDKLSVDEYVTLFINYKLKVAAALDAKLDTLSSFRQEYQMYRDQ--------------- 97 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q V + + + + A +L +Q Sbjct: 98 ------QVRPTMVTDAEVLDQARQMYERTQAM----IGSKGLVRPAHILLKLSTQATVQQ 147 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK- 252 Q + +RI + +K + V G+ ++ S +F+++ Sbjct: 148 QEKIHQRIDSVYRALQAGADFAELAKKVSEDTGSAVRGGELPWIAPSQTLKEFEDVAYSL 207 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + P+++ G I + +++ L +LK + A I A+ KLR+ Sbjct: 208 APGQLSQPFLSPVGYHIILMKERKQLEPFDSLKQSIVASLERHGIRNEIADM--KLRNR 264 >gi|261380152|ref|ZP_05984725.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria subflava NJ9703] gi|284796990|gb|EFC52337.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria subflava NJ9703] Length = 617 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 29/265 (10%), Positives = 65/265 (24%), Gaps = 11/265 (4%) Query: 57 SKRIALLKLQKINGELEKIAVQ-ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 + + ++ Q L + L+ + +Q I + T + + A + Sbjct: 132 DQFVEDIREQFQLQNLLNLVQNGALVSDAQARQLINLTQATRTIRSFTFSPEAFAAQVKV 191 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + + + D K E+ Sbjct: 192 DDAALQKYYEAHKKDYLIPQAVKLEYVALNI---KDLADKQTVSAEEVQKAYDSKSVDLS 248 Query: 176 REYLIRTVLFSIPDNKLQ--NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IG 232 I + + N + N + K A E + K++ + + G Sbjct: 249 PRAEIAHIFIPVMPNGDEASNAEIKAEVDKMAAELKEHPDSFAELAAKYSKDLSSSNKGG 308 Query: 233 KAQYLLES----DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 YL + + + ++ + G I + + KA + Sbjct: 309 NLGYLSKGGGSGFGPEFDKAAFALGKGEVSDTVKSSLGYHVIKVLNVEAEPTLEQAKARI 368 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAI 313 A K +KL +A Sbjct: 369 EAALKLKKAASAFNAAKEKLGEDAF 393 >gi|110082627|dbj|BAE97397.1| probable peptidyl-prolyl cis-trans isomerase [Halomonas halodenitrificans] Length = 273 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 17/240 (7%), Positives = 67/240 (27%), Gaps = 5/240 (2%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + E + + + + A + E G+ + Sbjct: 20 VGEAIIAEADIAQEMQYHPADSAGTAQLKAARALVVRELLRQRAADLGLAEASGADLDED 79 Query: 141 QSIWPDVVKNDFM-LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 ++ +++ + + + + +R +L + + + + Sbjct: 80 DAVIAVLLEQELNVPEPSEEDCRRFHATHAERFSEPTRLRVRHILLAAAPDDAEARDAGY 139 Query: 200 KRIKDAEESRLRLPKDCNKLEK-FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 + + + + P+ + + ++ G+ +L + L+ Sbjct: 140 RLGEKLVKQLVEHPERFTEFAQRHSACPSKEEGGELGWLAPGQTVAELDGALQHLNEGLH 199 Query: 259 N-PYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P ++ G I+I +++ + ++ + Y+ L+S + Sbjct: 200 DRPLASRYGWHVISIDARQEGRERPYEEVAEHVRHSLREQSTRRALRHYLMALQSEIGVE 259 >gi|328675683|gb|AEB28358.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) [Francisella cf. novicida 3523] Length = 469 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 121/309 (39%), Gaps = 23/309 (7%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-------ELEKIAVQEL 80 V + + ++ +N + IT ++ + +A L+ + N +L++ A+Q+L Sbjct: 40 VSMNVSDKKYLVNKTVAIVNSKPITSFELDQEVAKLEAMQPNSTFNADPLQLKRQALQDL 99 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I +++ Q E++ IT + ++ A G+S E ++ G+ + +K+ + Sbjct: 100 ISQSVLLQLAERNNITISNQQLDSAIQDIAAKNGVSVESLKLNIEAAGMSFDSYKKRIRD 159 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV------REYLIRTVLFSIPDNKLQN 194 Q + + + + EI +K + + Y ++ ++ ++PD+K Sbjct: 160 QLMISQLQQQAIAQQVYVSPEEIQKYIKKHQKQFDREMAPVKLYTLKNLIIALPDSKKAR 219 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKK 252 Q + K A +++F+ + VS G ++ D P + + + Sbjct: 220 QKKIDLFKKLALVVNDSNIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKKYIKEL 279 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY------LSAQNTPTKIEKHEAEYVK 306 + + P++ ++ I I + + ++ K + + + E+ ++ Sbjct: 280 KNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKKVTKYYVYAIEIKLDGSMTEEGAKSSLE 339 Query: 307 KLRSNAIIH 315 R+ I Sbjct: 340 --RAKLAIE 346 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 28/271 (10%), Positives = 78/271 (28%), Gaps = 9/271 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + +A +KL + + + + + + + + DSN V+ Sbjct: 190 QKQFDREMAPVKLYTLKNLIIALPDSKKARQKKIDLFKKLALVVNDSNIDFSEIVKQFSQ 249 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + V F++ + + I +K Sbjct: 250 APNAVSGGIVSQQVKFDSIPDIYKKYIKELKNHQ-VSQPFIVNHTLQMIYIDNIDEKAPI 308 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ + I + + + ++ A+ + + K+ + G Sbjct: 309 LSKKVTKYYVYAIEIKLDGSMTEEGAKSSLERAKLAIESGQQFTKVAMKYNQDYDHPN-G 367 Query: 233 KAQYLLESDLHP-----QFQNLLKKSQNNTTNPYVTQK-GVEYIAICDKRDLGGEIALKA 286 +++ E D P F L + +N + P+ I ++ LK Sbjct: 368 NFRWVSELDSPPSLPPAAFAQLKQLKENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKE 427 Query: 287 Y-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ ++ ++ +A I Sbjct: 428 QKALEAIFSEKAQEIYKTWLTSMKDDAYIEI 458 >gi|291613281|ref|YP_003523438.1| nitrogen fixation protein NifM [Sideroxydans lithotrophicus ES-1] gi|291583393|gb|ADE11051.1| nitrogen fixation protein NifM [Sideroxydans lithotrophicus ES-1] Length = 282 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 73/249 (29%), Gaps = 8/249 (3%) Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 ++ IA Q+ +ET E + TV + + EDFS L + G+ Sbjct: 34 ERVQSIAQQQHQLETRVLAAPEARDVMVPPATVEAAMQEIRGRY-PNEEDFSGDLARNGL 92 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + F L + +++ G EM++ Q R I Sbjct: 93 EEASFAAALERELKVDAIMEKVGTRAEGVSEMDVDLYYQYHPEQFRRPETRLARHILITI 152 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPK----DCNKLEKFASKIHDVSIGKAQYLLESDL-HP 244 N+ + + K + RL K + K + + GK L L Sbjct: 153 NESIAENTRAEAGKRIAVIQARLAKEPQRFEEQALKHSECPTALDGGKLGDLPRGKLFPE 212 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEA 302 + L + + ++ G + + K ++ + + Sbjct: 213 LDKALFELKAGEVSGVLESELGFHVLRCDAITEANVLGYDQAKQHIRKLLEQKRKRVCQQ 272 Query: 303 EYVKKLRSN 311 +VK L Sbjct: 273 AWVKGLVDR 281 >gi|78776347|ref|YP_392662.1| hypothetical protein Suden_0146 [Sulfurimonas denitrificans DSM 1251] gi|78496887|gb|ABB43427.1| hypothetical protein Suden_0146 [Sulfurimonas denitrificans DSM 1251] Length = 278 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 99/297 (33%), Gaps = 31/297 (10%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 I ++ + + S M + I + GE IT DI + L K+ A LI + Sbjct: 4 IILVLFLGTMLSAEMINGISVVVKGEAITIYDIKDEMRLSKVNATT------ATDILIRK 57 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF-LDKQGIGDNHFKQYLAIQS 142 L+ EI++ IT DS+ V + A + +S ++F D G+ FK+ + Sbjct: 58 KLEAAEIQERKITVDSSEVYDDIKKVAASNKMSIDEFYDAVRDSNGLTSAEFKEKTREKI 117 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + + ++ +V+ N+ + + + Sbjct: 118 LSQKLYSAIAYSSINMPDEDEMREYYELHKDEFSRPKAFSVIIYSSQNEEALRKKITTPM 177 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 ++E + Y S + L Q + T + Sbjct: 178 FVSDEIKAEERV-------------------LGYDKIS--PELAKMLESTQQKSFTPVIM 216 Query: 263 TQKGVEY-IAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 QKG + + + ++ LS K E+ ++Y +LR NA I Sbjct: 217 DQKGSHMSFYLVESKMPQSSSYEDVQNQLSNAIMGQKREQVLSDYFARLRGNADIQI 273 >gi|146284004|ref|YP_001174157.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas stutzeri A1501] gi|145572209|gb|ABP81315.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas stutzeri A1501] Length = 392 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 18/239 (7%), Positives = 61/239 (25%), Gaps = 4/239 (1%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I E L + A + E + G+ + Sbjct: 140 IAERLGISVNTVIAQLAKARQGWSARNFQAARALVVRELLRQRAEALGLSLLDAEGREDD 199 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 +++ + + + + + + + +R +L + + + + Sbjct: 200 RTLASLLERELQVPEPDDAACRRFFEHHRERFAEPLLLRVRHILLPAAPDDARARDAQYR 259 Query: 201 RIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 + P + ++ ++ G +L P+ L+ Sbjct: 260 LGQKLLRQLQAAPARFTELAQRHSACPSKEDGGALGWLAPGQTVPELDRALRHLAIGLHE 319 Query: 260 -PYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 P ++ G +++ ++R+ + + + Y+ L + Sbjct: 320 RPLASRYGWHLVSVDERREERPLPYEQVAERVRHSLREQATRRALRHYLLALEEEIGVE 378 >gi|219849264|ref|YP_002463697.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus aggregans DSM 9485] gi|219543523|gb|ACL25261.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus aggregans DSM 9485] Length = 515 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 13/199 (6%), Positives = 41/199 (20%), Gaps = 28/199 (14%) Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + ++ + ++ + R +L ++ Sbjct: 267 PELSKEEFRMALMEQYRDRLLNERIQ---AQLVPEDGFTYSTEPERVTARQILIAVKPPA 323 Query: 192 LQNQGFVQKRI-------KDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL- 242 ++ ++ + + + G + Sbjct: 324 EATPEQIEAAFAAALPTAQELVTQLRNGADFAALAAERSDDPGSRDNGGDIGSFDRNGFA 383 Query: 243 -------HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 N ++P TQ G + + ++ Sbjct: 384 DNGATYPPELVAAAFALPVNQISDPVRTQFGWHILEVTNRIVPSEADQ---------LQK 434 Query: 296 KIEKHEAEYVKKLRSNAII 314 K E++ + R+ A I Sbjct: 435 ARTKALDEWIAEQRAKADI 453 >gi|238026979|ref|YP_002911210.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia glumae BGR1] gi|237876173|gb|ACR28506.1| Peptidyl-prolyl cis-trans isomerase D [Burkholderia glumae BGR1] Length = 647 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 19/257 (7%), Positives = 49/257 (19%), Gaps = 11/257 (4%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 + ++ Q +L + + + Sbjct: 151 DQYQESIRYQLTQQQLPSNLIDSAFTPKSVARSLTDLAQQQREIQALVLKPADYAAKVQP 210 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + S + IQ + E +I Sbjct: 211 TDAQISAYYDAHKQAFATPETATIQYLVFTPATAA-ASATPPTEADIRKYYDDNTARYRT 269 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSI 231 E +R I + + A+ + ++ + A Sbjct: 270 EAQVRVSHIFIAAARGASAADKAAARAKADRLLADVKAHPDQFAQIAEKNSQDAPSAAKG 329 Query: 232 GKAQYLLESDLHPQFQNLLKK---SQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKA 286 G Y+ + + G + D + +K Sbjct: 330 GDLGYITRGSTAGGAAFDDAAFALKPGEISKVVESDLGFHILKATDVKPAIVKPFDEVKE 389 Query: 287 YLSAQNTPTKIEKHEAE 303 ++A+ K ++ Sbjct: 390 SIAAELKQQYAAKAFSD 406 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 18/155 (11%), Positives = 45/155 (29%), Gaps = 20/155 (12%) Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------GEL 72 V + ++ + S +++G IT + Q E Sbjct: 25 AFVGVQGFRDFFDDSANVASVDGRKITRAEFDSAYRQQIDQARQALGARYDAKVIDTPER 84 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF-------VQHARNTGLSAEDFSSFLD 125 + + +I + E+ + +T V + + AE ++ L Sbjct: 85 RQQLLDGMIEQRALADEVRRLHLTASDAAVREALLSNPIVAAMRKPDGSIDAERYTQLLA 144 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 QG+ + +++ + Q + N + Sbjct: 145 MQGMTPDQYQESIRYQLTQQQLPSNLIDSAFTPKS 179 >gi|222094778|ref|YP_002528838.1| peptidylprolyl isomerase [Bacillus cereus Q1] gi|221238836|gb|ACM11546.1| protein export protein prsa [Bacillus cereus Q1] Length = 286 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 88/305 (28%), Gaps = 45/305 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + V +S + S +I T+ G+ IT + +++ N K Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYEQMK-------NSPTGKQ 52 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +++E + + + D + F + L + G+ + K Sbjct: 53 TLNNMVLEKVLIKNYKVEDKDVDKKYD--------EMKKQIGDQFDTLLKQPGVTEKTLK 104 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q V+ K + + Sbjct: 105 NSVRAQLAQEKAVEQAITDKEVKDYYKPEIKASHILVKD--------------------- 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + K +E + ++++ G + + +F++ K Sbjct: 144 ---EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEDAAYKLK 200 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 ++ + P +Q G I + D ++ KA L + K + + + + K Sbjct: 201 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADLKKELVEKKKQDGEFMNDLMIKEIK 260 Query: 311 NAIIH 315 A + Sbjct: 261 KADVK 265 >gi|167950936|ref|ZP_02538010.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 331 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 20/241 (8%), Positives = 62/241 (25%), Gaps = 12/241 (4%) Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 +R+ L + + + +V + ++ I T D+ + + Sbjct: 72 FEQRVRQALLSEQLSQAVQNSVFA--TQREIEELIRLRNQTRDAAYFTLPVADFLSDEEI 129 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + S+ +Q + + E + + Sbjct: 130 PIDLVESYYQSHQNEFLAPEQVKIEYLL---LSAEAIAPTLDVQEEALRGYYEAHLESYG 186 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKI-HDVSI 231 R R + + ++ V + R R + + + + Sbjct: 187 RPEQRRASHILVQVAQDADEATVAAAKEKIASLRQRVEAGEAFADLAKSESQDPGSAAAG 246 Query: 232 GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYL 288 G + + + P F++ + + + G I + + + D+ + + Sbjct: 247 GDLGFFGKGIMDPAFESATFALKEGELSEAVRSSFGFHLIRLSEIKSGDVKSFEEARQEV 306 Query: 289 S 289 Sbjct: 307 E 307 >gi|327402945|ref|YP_004343783.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fluviicola taffensis DSM 16823] gi|327318453|gb|AEA42945.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fluviicola taffensis DSM 16823] Length = 651 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 27/302 (8%), Positives = 76/302 (25%), Gaps = 54/302 (17%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 ++ + + S + A + + I+G+ +T + + + + + +K+++ E + Sbjct: 5 LVLALGILFSLNTIAQTDNVVMEIDGKKVTKSEF---LQIYLKNNNDPKYDKVSLDEYMG 61 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 K + +T+ + A ++ + K + + + Sbjct: 62 LFKKFKLKVAEAEALGYDTIPKLKKELAGYRKQLSQPYLIDSTKNSALVAQAYERMKNEV 121 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 ++ + + Sbjct: 122 HAAHILVKVV--------------------------------------ENASPEDTLAAY 143 Query: 203 KDAEESRLRLPKDCNKL-----EKFASKIH-DVSIGKAQYLLESDLHPQFQN-LLKKSQN 255 + R+ + + + + G Y + QF+ Sbjct: 144 NRILAIKKRIENGEDFATVAKGKNGSDDPSAARNGGDLGYFTAFQMVYQFEEAAYMTQVG 203 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 +NP T+ G + + D R G + A + E + R Sbjct: 204 KISNPIRTKFGYHILKVIDIRPARGTMKA-----AHIMVATGKDAGQEELDDARKKVD-E 257 Query: 316 YY 317 Y Sbjct: 258 IY 259 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 24/263 (9%), Positives = 66/263 (25%), Gaps = 8/263 (3%) Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 +++ +K + + V+ E I F G Sbjct: 110 VAQAYERMKNEVHAAHILVKVVENASPEDTLAAYNRILAIKKRIENGEDFATVAKGKNGS 169 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + G Y ++ + V ++ Sbjct: 170 DDPSAARNGGDLGYFTAFQMVYQFEEAAYMTQV-GKISNPIRTKFGYHILKVIDIRPARG 228 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKA 234 ++ + D + +K++ + +F+ G+ Sbjct: 229 TMKAAHIMVATGKDAGQEELDDARKKVDEIYSKLQNGESFEKLAGEFSDDAQTAEKGGEL 288 Query: 235 ---QYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 + + P+F+ + + + P T G I + L LK + Sbjct: 289 PLFGTGTTTRMVPEFEEAAFALTANGDISKPVQTAFGFHIIKRLELTPLRSFDELKKEIQ 348 Query: 290 AQN-TPTKIEKHEAEYVKKLRSN 311 ++ + + +++KL+ + Sbjct: 349 SKVNKDERAIVTQNSFIQKLKKS 371 >gi|107028901|ref|YP_625996.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia AU 1054] gi|116689941|ref|YP_835564.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia HI2424] gi|105898065|gb|ABF81023.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia AU 1054] gi|116648030|gb|ABK08671.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia cenocepacia HI2424] Length = 645 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 24/271 (8%), Positives = 59/271 (21%), Gaps = 22/271 (8%) Query: 55 DISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 D+ + LL Q + ++ L ++ + + + R Sbjct: 135 DVERYAQLLSFQGMTPEQYQERVRYSLSLQQIPASIVSSAFTPKSLAQHLSELAAQQREV 194 Query: 114 GLSAEDFSSFLDKQGIGDNH---FKQYLAIQSIWPDVVKNDF--------MLKYGNLEME 162 S F K D + P+ + E + Sbjct: 195 QALVLKTSDFAAKVQPTDAQLTAYYDAHKQSFATPETATIQYLVYSPAAAAASAQPTEAD 254 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I E +R I + AE+ + ++ + Sbjct: 255 IKKFYDDNPTHFRTEAQVRVSHIFIAAPGSASAADKAAAKAKAEQLLADVKAHPDQFAQI 314 Query: 223 A-----SKIHDVSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274 A G ++ Q + + + G + + Sbjct: 315 AQKSSQDAPSAAKGGDLGFITRGSTAGGKAFDDAAFSLKQGDVSGIVQSDLGFHILKATE 374 Query: 275 KRD--LGGEIALKAYLSAQNTPTKIEKHEAE 303 + + +K ++ K ++ Sbjct: 375 VKPAVVKPFAEVKDQIAVDLKQQYASKAFSD 405 Score = 45.4 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 20/211 (9%), Positives = 53/211 (25%), Gaps = 15/211 (7%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------GELE 73 V I ++ + S +NG IT + Q E Sbjct: 26 FVGIQGFRGFFDDSANVAAVNGHKITRVEFDGAFRQQIDQARQALGGQFDIKMFDTPEHR 85 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--QHARNTGLSAEDFSSFLDKQGIGD 131 K + LI + + E ++ +T N V + + Q + Sbjct: 86 KQVLDGLIQQRVLADETQRLHLTASDNAVRDALMSDPMIASLKKPDGTIDVERYAQLLSF 145 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + + + + Q + + ++ ++ ++ D Sbjct: 146 QGMTPEQYQERVRYSLSLQQIPASIVSSAFTPKSLAQHLSELAAQQREVQALVLKTSDFA 205 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q + + + ++ Sbjct: 206 AKVQPTDAQLTAYYDAHKQSFATPETATIQY 236 >gi|330809994|ref|YP_004354456.1| peptidylprolyl isomerase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378102|gb|AEA69452.1| putative Peptidylprolyl isomerase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 322 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 27/276 (9%), Positives = 72/276 (26%), Gaps = 38/276 (13%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG +T +++ + + + A +I E L Sbjct: 67 IISVNGVSVTPQAMAQELQYHPADSREDAVYQAARALVIRELL----------------- 109 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + + + + L + + P + + Sbjct: 110 --------QQRIAELGLALQVGAGENEEEAATRLLLEREVLVPQCDEATCLR-------- 153 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL-PKDCNKLEK 221 + + + +R +L + + + + + E + K Sbjct: 154 -YYESNRARFHSAPLLAVRHILLECAPDDAEARSLAHVQAELLLERLDQFPGSFAELALK 212 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDK--RDL 278 ++ G + + P+ + L P ++ G I+I + Sbjct: 213 HSACPSKEQGGSLGQISKGQTVPELERQLFTLPAGLAGKPLESRYGWHVISIDQRIDGQP 272 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 A+ + Q +K +Y++ L A I Sbjct: 273 LPYEAVATAIRTQLQQGVWQKALVQYLQTLIGAADI 308 >gi|121608769|ref|YP_996576.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verminephrobacter eiseniae EF01-2] gi|121553409|gb|ABM57558.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verminephrobacter eiseniae EF01-2] Length = 261 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 79/278 (28%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG+ + L+ E+EK E+I + Q + G+ ++ Sbjct: 27 IAIVNGKPVPKERADMLRQQLERSGRPVTPEIEKQINAEVIDREVLVQAALERGLEGSAD 86 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 N + + + + Sbjct: 87 YKNQ------------------------------MELAREAILINALFADFRKANPVTDA 116 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + +EY +L + K + + K + + Sbjct: 117 ETQAEYDKFVAANNGKEYKASHIL-----------VDKEADAKAIIAAIKKGAKFEDIAK 165 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRD 277 K + G + + +F + L+K Q T+ P +Q G I + D R Sbjct: 166 KQSKDPGSGAKGGDLGWASPASYVSEFTEALIKLDQGKMTDAPVKSQFGWHVIRLDDMRP 225 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + Q +++ +A+Y ++LR+ A I Sbjct: 226 IQL--PKLEDVKPQVAQQLLQQKQAKYQEELRAKAKIE 261 >gi|118474339|ref|YP_892696.1| putative periplasmic protein [Campylobacter fetus subsp. fetus 82-40] gi|118413565|gb|ABK81985.1| putative periplasmic protein [Campylobacter fetus subsp. fetus 82-40] Length = 275 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 94/296 (31%), Gaps = 29/296 (9%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 I+F V ++ + + + E ITD +I + + + + A+ LI Sbjct: 4 IVFLTVFLLGILHAEYVNGLVAIVENEPITDYEIQQVMTKMNIS------PNDALSVLIR 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E L+ +I GI+ D+ + A+ G+ F + ++ +GI FK + Sbjct: 58 ERLEDAQIRTLGISADNYEADEKIAALAQANGIDVTTFKNVIESRGISSEDFKNDIKTGI 117 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + N+ E + ++ +V + +N+ + + Sbjct: 118 KKEKLYARILNNPSQNITPENARRFYEANPKMFVQFEKISVTKYLTNNRQSLNEISKNPM 177 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 S VSI + LL + + T + Sbjct: 178 ---------------------SVQPGVSIENVVLESKELNPQLRYILLNTKKGSFTPIFQ 216 Query: 263 TQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 T G E + K +++ + A + E A+Y KLR A I Sbjct: 217 TADGFEIFYVYSKEGSYLPDFNSIEKEVVAAMASQEQEIAVADYFNKLRVKANIEI 272 >gi|329908176|ref|ZP_08274836.1| Peptidyl-prolyl cis-trans isomerase ppiD [Oxalobacteraceae bacterium IMCC9480] gi|327546752|gb|EGF31691.1| Peptidyl-prolyl cis-trans isomerase ppiD [Oxalobacteraceae bacterium IMCC9480] Length = 642 Score = 67.4 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 31/252 (12%), Positives = 64/252 (25%), Gaps = 11/252 (4%) Query: 63 LKLQKINGELEKIAVQELIVETL---KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 + Q++ ++ + I T K S I TV + A Sbjct: 149 MYEQRLRQDMAVQQLNSAIQSTAFAPKTVATRLSDINDQERTVQELLFKPADYAAKVNVT 208 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 F+ + + + + + E+ ++ K + Sbjct: 209 ADMLKAYYDKNARQFEVPEQATIQYVVLSSDALASQIAVTDQEVADFYEQNKKSFGVDEQ 268 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-----DVSIGKA 234 R I K + AE+ ++ K K A G Sbjct: 269 RRASHILINLKKGASATEKAAAKAKAEQVLAQVRKAPGDFAKIAKASSEDQGSAPEGGDL 328 Query: 235 QYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQ 291 + + + P + + K N + + G I + + +K + A Sbjct: 329 DFFGKGAMTPPFEEAVFKLKLNEISGLVESDFGFHIIEVTAIKPASFRTLDQVKPQIVAD 388 Query: 292 NTPTKIEKHEAE 303 K K +E Sbjct: 389 IKRQKAAKQYSE 400 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 50/164 (30%), Gaps = 18/164 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR- 59 M V T ++ L ++ F +V + SYKS+ + + + G+ IT + Sbjct: 1 MFEFVRTH-KRLMQFLLLLIIVPSFALVGLGSYKSFGDAENVIAKVGGQPITQVEYDAAQ 59 Query: 60 ------------IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 E + + LI + E + ++ + Sbjct: 60 REQMARFKQMFGAQFDPKMFDTPEARQGILDNLIAQRALSVEAARQHLSVADAALQQSIT 119 Query: 108 QHA----RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 A + E + S L QG+ ++Q L + Sbjct: 120 GIAGLVGPDGKFDGERYRSLLAMQGMTPAMYEQRLRQDMAVQQL 163 >gi|149372555|ref|ZP_01891667.1| possible peptidyl-prolyl cis-trans isomerase [unidentified eubacterium SCB49] gi|149354598|gb|EDM43162.1| possible peptidyl-prolyl cis-trans isomerase [unidentified eubacterium SCB49] Length = 653 Score = 67.4 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 32/271 (11%), Positives = 79/271 (29%), Gaps = 40/271 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + I+F ++ + + S + TI+G + + + Sbjct: 1 MKLKITSILFMLLVTLVASAQKKSD-VIMTIDGNPVYANEFVRVYQKNL----------- 48 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 EL+ + +K + D + N S ++Q + ++ Sbjct: 49 ---ELVQDESQKSVDGYLDLFVDYKLKVAEAYEQGLNNNDDYRKEFSKYEEQLSRNYLYE 105 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + LK ++ S D+ Q+ Sbjct: 106 DKVTTDLAKLAYERGKYDLKVA-----------------------HILVRSSYDDVPQDT 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ 254 +IK+A + ++ + G Y + QF+++ ++ Sbjct: 143 LKAYNKIKEALDKARSGEDFGTLAGTYSEEPGAAERGGDIGYFSTFTMVHQFEDMAYETP 202 Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 ++ TQ G + + DKR+ +I + Sbjct: 203 VGEISDIVRTQFGYHILKVEDKRERSPDITV 233 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 12/116 (10%), Positives = 34/116 (29%), Gaps = 4/116 (3%) Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESD 241 + + ++RI + + + ++++ GK + Sbjct: 235 HIMISDKDNAARTFDPEERINEVNTLLKQGSSFEDLAKQYSEDKNSGKKGGKLNRFGKGQ 294 Query: 242 LHP---QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 L + K+ + + P+ T+ G + + +K K L + Sbjct: 295 LRSAAFEEVAYGLKNVGDVSEPFKTEFGWHIVRLDEKHTHQTFEEQKEMLEKKVGE 350 >gi|241764579|ref|ZP_04762596.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax delafieldii 2AN] gi|241365982|gb|EER60603.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax delafieldii 2AN] Length = 309 Score = 67.4 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 15/179 (8%), Positives = 50/179 (27%), Gaps = 6/179 (3%) Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 I + + + + + +R VLF++ Q ++ Sbjct: 118 IEQLLERELPIPEPSEEACRRYHEAHPAAHAQGERAQLRHVLFAVTPGVDVKQLRLRAEA 177 Query: 203 KDAEESRLR--LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTT 258 + + ++++ G +L +D P+F + + Sbjct: 178 MLLDLRCADDGGVRFAEAAAQWSNCPSGQQGGDLGWLSRADCAPEFAREVFGSAEIGVLS 237 Query: 259 NPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++ G+ + + + ++ + +Y++ L A++ Sbjct: 238 RLVHSRFGLHVVEVVAREAGLQPSFEEVRKAIGLTLRQQAWVNALRQYLQLLAGAAVVE 296 >gi|194018008|ref|ZP_03056615.1| YacD [Bacillus pumilus ATCC 7061] gi|194010345|gb|EDW19920.1| YacD [Bacillus pumilus ATCC 7061] Length = 302 Score = 67.4 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 36/323 (11%), Positives = 96/323 (29%), Gaps = 35/323 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + ++V + + ++ + + + S S +I E +T + K++ Sbjct: 3 LKARVVWTFILVLLMINAVVIAYVLTKSQMSQASSNGKSGEEIASIGKEKVTRQEWLKKM 62 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 K ++++I + + Q +++ + S +N + + ED Sbjct: 63 --------EDRYGKATLEQMINQKVVDQLAKENKLEVSSKEINRELLMLKAVSNNFYEDG 114 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + ++ Q + +++ E E + +K K++ + Sbjct: 115 -----------HTSEKDWTEQIRYQILLEQLLTRDAVVSEKEAKSFYEKNKDLYQYDDSY 163 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + + E+ + G ++ E Sbjct: 164 RIRHIVVKTKGEAENVLK--------DLKGGSSFEAVAAERSIDRYTSPYGGDLGFVTEE 215 Query: 241 DLH----PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTP 294 + + T P T+ G I + +K D +K + Q Sbjct: 216 QESIPALYIQEAQKLQPDQWTKEPIETKNGYAIIQLKEKLDGRSFSYEEVKNQIKRQIAM 275 Query: 295 TKIEKHEAEYVKKLRSNAIIHYY 317 + + VK L A + ++ Sbjct: 276 EDLGEKAN--VKTLWKEAKVTWF 296 >gi|319900080|ref|YP_004159808.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacteroides helcogenes P 36-108] gi|319415111|gb|ADV42222.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacteroides helcogenes P 36-108] Length = 518 Score = 67.4 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 26/301 (8%), Positives = 89/301 (29%), Gaps = 42/301 (13%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 + ++ ++ C+ S + + ING+ + + + Sbjct: 1 MIMIKNGLAIVFLCL----SLATAVAQDPVLMRINGKDVLRSEFEYVYN---KNNKSASA 53 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + + + + T +T + F + S+ + + + + Sbjct: 54 RQVMPKNYVGTFIDYKLKVAEAETAGMDTTSAFRDKLEARRRWSSISYLVDEETEERIAH 113 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 F L V + +I + L Sbjct: 114 RFYNRLKFARQAGKVRVSHIFKYLSQ---------------------------NISGHAL 146 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK- 251 I + + + F+ + + ++ + +F++++ Sbjct: 147 HEIEAKMDSIYQMLRKQGKNADFDACVVDFSDEKSEF------WVSWLQMPAEFEDIVFG 200 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-AQNTPTKIEKHEAEYVKKLRS 310 ++P+ T +G+ + + ++R+L +K + ++ ++++ V+KL+ Sbjct: 201 MQVGEISHPFFTPQGIHIVKVLERRELPPFEEVKEGIMHSRTYRYEMDEEMDALVEKLKK 260 Query: 311 N 311 Sbjct: 261 E 261 >gi|120555794|ref|YP_960145.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinobacter aquaeolei VT8] gi|120325643|gb|ABM19958.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinobacter aquaeolei VT8] Length = 92 Score = 67.4 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 27/78 (34%), Gaps = 1/78 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 + + ++ +++ ++ +S + G + P+F + + N Sbjct: 14 EAKCEELKKAIEGGQDFAEVAKQHSSCPSGRNGGDLGSFGPGQMVPEFDKAVFNSELNTV 73 Query: 258 TNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 74 IGPIKTQFGYHLLEVTSR 91 >gi|224437416|ref|ZP_03658385.1| hypothetical protein HcinC1_05580 [Helicobacter cinaedi CCUG 18818] Length = 281 Score = 67.4 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 29/239 (12%), Positives = 64/239 (26%), Gaps = 4/239 (1%) Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + KQ I S+ +Q N L + + + Q Sbjct: 41 DLEILKQSIPNFNYAKLSDQEKEGIIQELVNRQLILKAAKAEKLDTSKEYTEAINNIKDQ 100 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + K + + N + + + + + +++ Sbjct: 101 LLIDLWSKKQVGGIQMPSVNDAQIKEIYKNNEGMFINQEMHARHILVKTESEAKDIIKEL 160 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT--N 259 K +++ + + N + + G + +HP F N + T Sbjct: 161 DKAGKKAESKFIELANAKSTDPASKQAKNGGDLGTFQRNVMHPDFANAASNLKPGTYTQE 220 Query: 260 PYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P T G I + K + K + Q ++ + ++ LR A I Sbjct: 221 PVQTPFGYHVIYLIKKSEPKIIPYNEAKKIIEEQIKMQNVQGGMMQKIQALREKAKIQI 279 >gi|189426077|ref|YP_001953254.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter lovleyi SZ] gi|189422336|gb|ACD96734.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter lovleyi SZ] Length = 242 Score = 67.4 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 11/114 (9%), Positives = 27/114 (23%), Gaps = 5/114 (4%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 + R + + ++ +S G + P+F ++ N Sbjct: 11 DTEARCLQLKADIEAGADFADVAQRESSCPSRQKGGDLGTFGPGQMVPEFDQVVFSGELN 70 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGE----IALKAYLSAQNTPTKIEKHEAEYV 305 P TQ G I + ++ + + + Sbjct: 71 KVLGPVKTQFGYHLIEVTNRWEQPATQAGGESDLDQALVALRQDMSDATAQSKF 124 >gi|330817266|ref|YP_004360971.1| Peptidyl-prolyl cis-trans isomerase D [Burkholderia gladioli BSR3] gi|327369659|gb|AEA61015.1| Peptidyl-prolyl cis-trans isomerase D [Burkholderia gladioli BSR3] Length = 646 Score = 67.4 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 18/257 (7%), Positives = 51/257 (19%), Gaps = 12/257 (4%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 + ++ Q +L + Q + Sbjct: 151 DQYQESVRYQLSQSQLPNNLINSAFTPRSVAQRLTDLAQQQREIQAMVLKPADYAAKVQP 210 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + S + +IQ + + ++ + Sbjct: 211 TDAQLSAYYDAHKQAFATPETASIQYLV--FTPAAAAANAQPSDADLHKFYEDNTARFRT 268 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSI 231 E +R I + + AE+ + ++ + A Sbjct: 269 EAQVRVSHIFIAAARNASASDKAAAKAKAEQLLAEVTAHPDQFAQIAEKNSQDAPSAAKG 328 Query: 232 GKAQYLLESDL---HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKA 286 G Y+ + + G + D + +K Sbjct: 329 GDLGYVTRGSTAGGPAFDDAAFALKPGELSKVVESDLGYHILKATDVKPAVVKPFDEVKD 388 Query: 287 YLSAQNTPTKIEKHEAE 303 ++ + K ++ Sbjct: 389 SIATELKQQFAAKAFSD 405 Score = 44.7 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 19/211 (9%), Positives = 59/211 (27%), Gaps = 15/211 (7%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------------GELE 73 V + ++ + S +++G IT + Q E Sbjct: 26 FVGVQGFRDFFDDSANVASVDGHKITRAEFDGAYRQQIDQARQALGANFDAKQFDTPERR 85 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--QHARNTGLSAEDFSSFLDKQGIGD 131 + + +I + E+ + +T N V + + + Q + Sbjct: 86 QQLLDGIIEQRALTDEVRRLHLTASDNAVREALMSNPIIASLRKPDGSIDAERYTQLLAM 145 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 +S+ + ++ N + Q++ ++ ++ I+ ++ D Sbjct: 146 QGMTPDQYQESVRYQLSQSQLPNNLINSAFTPRSVAQRLTDLAQQQREIQAMVLKPADYA 205 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q + + + ++ Sbjct: 206 AKVQPTDAQLSAYYDAHKQAFATPETASIQY 236 >gi|291279157|ref|YP_003495992.1| hypothetical protein DEFDS_0758 [Deferribacter desulfuricans SSM1] gi|290753859|dbj|BAI80236.1| hypothetical protein [Deferribacter desulfuricans SSM1] Length = 325 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 35/315 (11%), Positives = 102/315 (32%), Gaps = 16/315 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA-------LLKL 65 ++ + ++IF +V + S +A ++ +N + I ++ + Sbjct: 9 MRFILNCAKILIFIMVLVHSNLLFA-EDKVVAKVNEQDIHLFEVKSFLNKVVPIGRFHTQ 67 Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDS--NTVNYFFVQHARNTGLSAEDFSSF 123 E + A+ I I+ + + ++ + S +++ Sbjct: 68 SLNKKEYWEKALNTAIDSRAIVIFIKNNNPEIYNGLKNKVNEIIKVIKKRFKSNNEYAKA 127 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 L + GI + + ++ + + F K ++ + T Y+++ Sbjct: 128 LKENGITEKILYETYMDLNVKDIIKEKIFSEKIEPKVLKEYYKNNQQMFSTGESYVVKNC 187 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 L +L+ + +K+ + ++ +D +K I+ + + + Sbjct: 188 LIKADARELKAKEMEEKKKEAENLLKMLKEEDEKAWQKCDKGIYPEQ----DTVYKFSKN 243 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHE 301 + + K + + PY G + + D + +K + K + + Sbjct: 244 YPIKEIFKLKKGDFGGPYRNIYGYLIVKVIDIKPSEVLPFDEIKNEIERLMKLKKFKDYY 303 Query: 302 AEYVKKLRSNAIIHY 316 +K+ + A I Sbjct: 304 KNLLKRAKDEANIKI 318 >gi|21673044|ref|NP_661109.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Chlorobium tepidum TLS] gi|21646111|gb|AAM71451.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Chlorobium tepidum TLS] Length = 700 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 41/134 (30%), Gaps = 4/134 (2%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 +L + +K E + K++ + G + + Sbjct: 350 HILIRLNPADKAEAARAMGLLKKISEELKGGASFASLAAKYSEDPGSARNGGFVGWFTKD 409 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC--DKRDLGGEIALKAYLSAQNTPTKI 297 + PQF + P TQ G+ I I D R + + ++ T I Sbjct: 410 RMVPQFAQAVFAGKPGQIVGPVQTQFGLHIIKIEGFDNRRIVCSEVARQIKASTQTSETI 469 Query: 298 EKHEAEYVKKLRSN 311 ++ ++ + +S Sbjct: 470 KRQAQAFLTEAKSK 483 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 2/80 (2%) Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKI 297 + + N + P T G + + ++ A K + Q + Sbjct: 620 GVDPQLVEGMAGMKLNTLSQPVQTSGGYALVQLTSRQLAPGTDLAAEKQKVLPQLMQARQ 679 Query: 298 EKHEAEYVKKLRSNAIIHYY 317 ++ +EY++ R NA I + Sbjct: 680 QQFLSEYLQSYRRNAKIEDF 699 >gi|229161287|ref|ZP_04289272.1| Foldase protein prsA 1 [Bacillus cereus R309803] gi|228622101|gb|EEK78942.1| Foldase protein prsA 1 [Bacillus cereus R309803] Length = 256 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 39/137 (28%), Gaps = 6/137 (4%) Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLH 243 + +K K+ +E ++++ G+ Sbjct: 104 YKPEMKVSHILVKDEKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEIPGFAPGQTV 163 Query: 244 PQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 +F+ K + P T G I DK++L +K + +++ Sbjct: 164 KEFEEAAYKLDAGQVSEPIKTTYGYHIIKATDKKELKPFDEVKGEIRKDLEEQRLQDTTG 223 Query: 303 EY----VKKLRSNAIIH 315 ++ V L A I Sbjct: 224 KWKQQVVTDLLKAADIK 240 >gi|319897486|ref|YP_004135683.1| peptidyl-prolyl cis-trans isomerase d [Haemophilus influenzae F3031] gi|317432992|emb|CBY81363.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae F3031] Length = 622 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 45/395 (11%), Positives = 111/395 (28%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD-ISKR 59 + K+ + I + + F + + Y ++ + +NGEVI+ D +++ Sbjct: 2 LIEKMHNLTNSKISKFILGLITVSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 60 IALLKLQKING---------------ELEKIAVQELIV-----------------ETLKK 87 +++ L + V +I E +K+ Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---- 184 VK D M K + EI + + V+ ++ Sbjct: 181 VKNSAEIFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 185 ------------------------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + Q ++ K A E + + + Sbjct: 241 ADNISRNLQVTDVEIAQYYQDNKAQFMTQHLAHIQFANEQDAKVAYEELEKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ E++L F++ + P + + +++ Sbjct: 301 AKSLDKISGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA ++ + +E K+ A Sbjct: 360 QSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394 >gi|296122979|ref|YP_003630757.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces limnophilus DSM 3776] gi|296015319|gb|ADG68558.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces limnophilus DSM 3776] Length = 377 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 31/284 (10%), Positives = 80/284 (28%), Gaps = 31/284 (10%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 ++ +N E+I +++ K + ++I T+ +Q E +G+T Sbjct: 72 KVMARVNKEIIPFDMVAEECV--------ARYGKEVLDDIINRTMIQQACEAAGVTVTEE 123 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 V + A+ + + + Q + +QY +K K E Sbjct: 124 EVTAEINRIAKRFN--LDVNNWYQMLQAERGINPQQYRRSVIWPMLALKKLASEKIDIKE 181 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ R +L +++ E++ + Sbjct: 182 EELNRAF---VRNYGPRVKARMILM----------DNLRRATTVWEKANADADNFEKYAQ 228 Query: 221 KFASKIHDVS-IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT-QKGVEYIAICDKRD 277 +F+ + G + + + + + + I C+ R Sbjct: 229 EFSIDPQSRALGGSVPPIPKYSGNDSLEKAAFALKEGEISGVIEVGPSRFAIIK-CEGRT 287 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEA----EYVKKLRSNAIIHYY 317 + L + E+ + ++++ + I Y Sbjct: 288 VPTVNELTQEIRDSLYDELAEQKTQVSVAKTFEEIQKSTRIDNY 331 >gi|157690854|ref|YP_001485316.1| peptidylprolyl isomerase [Bacillus pumilus SAFR-032] gi|157679612|gb|ABV60756.1| possible peptidylprolyl isomerase [Bacillus pumilus SAFR-032] Length = 302 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 36/323 (11%), Positives = 96/323 (29%), Gaps = 35/323 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + ++V + + ++ + + + S S +I E +T + K++ Sbjct: 3 LKARVVWTFILVLLMINAVVIAYVLTKSQMSQASSNGKSGEEIASIGKEKVTRQEWLKKM 62 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 K ++++I + + Q +++ + S +N + + ED Sbjct: 63 --------EDRYGKATLEQMINQKVVNQLAKENKLEVSSKEINRELLMLKAVSNNFYEDG 114 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + ++ Q + +++ E E + +K K++ + Sbjct: 115 -----------HTSEKDWTEQIRYQILLEQLLTRDAVVSEKEAKSFYEKNKDLYQYDDSY 163 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + + E+ + G ++ E Sbjct: 164 RIRHIVVKTKGEAENVLK--------DLKGGSSFEAVAAERSIDRYTSPYGGDLGFVTEE 215 Query: 241 DLH----PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTP 294 + + T P T+ G I + +K D +K + Q Sbjct: 216 QESIPALYIQEAQKLQPDEWTKEPIETKNGYAIIQLKEKLDGRSFSYEEVKNQIKRQIAM 275 Query: 295 TKIEKHEAEYVKKLRSNAIIHYY 317 + + VK L A + ++ Sbjct: 276 EDLGEKAN--VKTLWKEAKVTWF 296 >gi|33152751|ref|NP_874104.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus ducreyi 35000HP] gi|38605184|sp|Q7VKX4|PPID_HAEDU RecName: Full=Peptidyl-prolyl cis-trans isomerase D; Short=PPIase D; AltName: Full=Rotamase D gi|33148975|gb|AAP96493.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus ducreyi 35000HP] Length = 620 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 15/171 (8%), Positives = 42/171 (24%), Gaps = 6/171 (3%) Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV--QKRIKDAE 206 + + + +I N Q Y F + +++ K Sbjct: 228 EQLVVEYVTFMPKDIEKNIQVTDEQVATYYEKNKADFVTKGETHLAHIQLANEEKAKQVA 287 Query: 207 ESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 E+ + + + G + F+ + N + P Sbjct: 288 EALKQGTDFAMLANDTSTDSLSAQQGGDLGWTKAGIFPEIFEQTANALAINEVSEPVKVD 347 Query: 265 KGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 I + D+++ +K + + + ++ + A Sbjct: 348 NNYHIIKVLDRKEDVALPFEMVKDKIVKIIRDELLLTEYSNISHEMANKAF 398 Score = 39.3 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 19/193 (9%), Positives = 49/193 (25%), Gaps = 21/193 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + F L+ V + +NG I + Sbjct: 1 MIEKMHERTNSVA--FKVIFALVSLSFVLTGIGTGLVGADTSAVKVNGTTIDQHAFNTAK 58 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 A + + + + L+ + L +Q + + +N + Sbjct: 59 ARQQNVLNAQLGERFWDLLDTPEYAKQFNQSVLDGLVNDELMRQYAKDLKLGISANQIKS 118 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 ++ + E + L G+ + + + + + K + Sbjct: 119 QIVNSQIFQQDGKFNNELYQHTLRNNGLTADGYAAIVNEGMLLSQIQKGIVESDFSVPVT 178 Query: 162 EIPANKQKMKNIT 174 E K ++ Sbjct: 179 EALLAKLLLQQRQ 191 >gi|78486057|ref|YP_391982.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomicrospira crunogena XCL-2] gi|78364343|gb|ABB42308.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomicrospira crunogena XCL-2] Length = 93 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 10/82 (12%), Positives = 26/82 (31%), Gaps = 1/82 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 + + + ++ + + +S S G + P+F + Sbjct: 12 ETEAKALELKKQIEEGADFADVAKANSSCPSSRSGGDLGQFGPGMMVPEFDKVCFSADVG 71 Query: 256 NTTNPYVTQKGVEYIAICDKRD 277 + P TQ G + + D+ + Sbjct: 72 SLEGPIKTQFGYHLVEVTDRTE 93 >gi|74317691|ref|YP_315431.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiobacillus denitrificans ATCC 25259] gi|74057186|gb|AAZ97626.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiobacillus denitrificans ATCC 25259] Length = 647 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 19/162 (11%), Positives = 36/162 (22%), Gaps = 8/162 (4%) Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 E + + I +K + K A L K Sbjct: 259 ISVSEQAVRDYYAANAAQFGQPEQRSASHILIAADKDSDAATRAKAKAKATALMETLRKQ 318 Query: 216 CNKLEKFASKIHDVSI-----GKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEY 269 + + A G + F++ + P + G Sbjct: 319 PERFGELARSTSQDPGSAEQDGSLGSFGRGMMVKPFEDAVFAMKPKEIRGPVESDFGYHI 378 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 I + G+ A A + A ++ + L N Sbjct: 379 IRLDSIEP--GKAAPLAEVRAAIVDELRKQQAQKTFADLADN 418 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 33/137 (24%), Gaps = 13/137 (9%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + ++ + + + F + I SY S S + + IT ++++ I Sbjct: 16 LEAIRKHAKGWLAKVILGLIAVTFALFGIDSYMSGDRSGGVVAEVGKVGITREELTREIQ 75 Query: 62 -------------LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 K + LI E EK + V Q Sbjct: 76 AQSDRLRESLGPAFDPSMTETAAFRKQVLDSLIERKALLLEAEKLKFLAPDSYVAAAIGQ 135 Query: 109 HARNTGLSAEDFSSFLD 125 + Sbjct: 136 IPAFQQDGKFSPQRYEA 152 >gi|71907025|ref|YP_284612.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dechloromonas aromatica RCB] gi|71846646|gb|AAZ46142.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dechloromonas aromatica RCB] Length = 271 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 18/199 (9%), Positives = 58/199 (29%), Gaps = 3/199 (1%) Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + E+F + + + + +Q + V++ ++ + Sbjct: 70 RYPANEEFILDMARSDLDEAALEQAVERDLRIEAVLEKVASSSPPVSAVDAEIYYRLHPE 129 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 R R I N Q + ++ + K + + + G Sbjct: 130 AFDRPEARRLRHILITFNTPQEKAKAIATLESLRSTLKNPAKFAEAALRHSQCPTAMEGG 189 Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLS 289 + + L+ + + ++ + + G+ + + G + + Sbjct: 190 QLGTVKRKQLYAELEPAAFALNEGEISAVLASPIGLHILRCDEILPSGMLAFGEVCERII 249 Query: 290 AQNTPTKIEKHEAEYVKKL 308 A+ + + + E++K L Sbjct: 250 ARLGDKRRREAQREWIKSL 268 >gi|303241900|ref|ZP_07328394.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acetivibrio cellulolyticus CD2] gi|302590574|gb|EFL60328.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acetivibrio cellulolyticus CD2] Length = 495 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 87/297 (29%), Gaps = 22/297 (7%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGE-----------LEKIAVQELIVETLKKQ 88 I ++NG+ + D N L+ L++ T+ Q Sbjct: 194 DVIVGSVNGQALHKKDFDYIFNPQYNNFKNNNTTEPTETDLKTLKDTCFDNLVLYTVLMQ 253 Query: 89 EIEKSGITFDSNTVNYF--FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 + K T + + E+F S +++ G+ F L + Sbjct: 254 KAAKGNYTLSESDYGEINDTINSYIQAYGGVENFRSIMEESGVTLYQFSNNLRDSKLINK 313 Query: 147 VVKNDFML-KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + + ++ K I + + +LFS + ++ +K Sbjct: 314 MALDLVTNVNASEETIKKYYEDNKSMYIQPEQVRAKHILFSTKEITGEDYDAQKKAEIKK 373 Query: 206 E-----ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTN 259 + + K+ + + ++ +F+ ++ Sbjct: 374 KAEEVLAQIKAGADFDELMNKYTEDPGTANYPNGYTFSKGEMVQEFEEKSFSMKVGEISD 433 Query: 260 PYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 TQ G I + +K +K + A+ P + + + + + + ++ + I Sbjct: 434 LVETQFGYHIIKLEEKIPETQLKLDDVKDSIKAELDPQEKQNYFDKLLVQFKAESAI 490 >gi|256823166|ref|YP_003147129.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Kangiella koreensis DSM 16069] gi|256796705|gb|ACV27361.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Kangiella koreensis DSM 16069] Length = 624 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 38/375 (10%), Positives = 100/375 (26%), Gaps = 101/375 (26%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK------------INGELEKI 75 + ++ + + G IT+ I +R+ ++ Q L + Sbjct: 15 AGYFTGTLFSGNPDKVAEVEGAEITNAQIQQRVDNVRRQMGDQFEQQYATEASQQLLRQQ 74 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVN---YFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++LI E + + + K+G+T + F SA+ L +QG + Sbjct: 75 IKEQLISEQVLRANLTKAGLTASEQQIKAWAREFPAFQIGGVYSADQAKMILAQQGWSEE 134 Query: 133 HFKQYLAIQSIWPDV---------------------------------VKNDFMLKYGNL 159 F+Q+ Q + + F Sbjct: 135 RFRQFARQQIAQEQLEQGVGASNFALNFEVEAYYQLQEQTRDVGYVRVAREAFSDSVDVS 194 Query: 160 EMEIPANKQKMKNITVREYLIRT------------------------------------- 182 + E+ ++ + + ++ Sbjct: 195 DSEVKEYYEQNQTQFEQPEMVNLRYVRLSLTELSQDLMADVSNEQITSFYEQNKANYQDP 254 Query: 183 -VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL--- 237 + + Q + + + ++ +S + G+ ++ Sbjct: 255 AEILVAHILIDSSVEDAQSKAQSLLSDIEQGADFAELAKEHSSDTFSGENGGQLDWVDAV 314 Query: 238 -------LESDLHPQFQNL--LKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKA 286 + P+F+ ++ + T+ +Q G I + DK+ D+ ++ Sbjct: 315 PTSDDNPTGTGWVPEFEAAALALENVGDVTDLVESQFGYHIIKLVDKKAADVSPLENVQD 374 Query: 287 YLSAQNTPTKIEKHE 301 + Q + +K Sbjct: 375 EIRQQLALEQAQKIF 389 >gi|88813287|ref|ZP_01128526.1| peptidyl-prolyl cis-trans isomerase C [Nitrococcus mobilis Nb-231] gi|88789459|gb|EAR20587.1| peptidyl-prolyl cis-trans isomerase C [Nitrococcus mobilis Nb-231] Length = 131 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 30/99 (30%), Gaps = 3/99 (3%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 ++R ++ +E ++F+ G + PQF + + N Sbjct: 14 EQRCRELKERIDNGEDFATLAKRFSHCPSGHHGGDLGEFGAGRMVPQFDEVAFEGELNKV 73 Query: 258 TNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTP 294 P TQ G I + + R L+ A Sbjct: 74 HGPVRTQFGYHLIEVLSRGERKDSPIAVLRRKCQASLRA 112 >gi|301312046|ref|ZP_07217968.1| putative PPIC-type PPIASE domain protein [Bacteroides sp. 20_3] gi|300830148|gb|EFK60796.1| putative PPIC-type PPIASE domain protein [Bacteroides sp. 20_3] Length = 522 Score = 67.0 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 13/150 (8%), Positives = 44/150 (29%), Gaps = 4/150 (2%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-S 224 K R ++ ++ D+ +Q+ + + + ++++ Sbjct: 218 KVHSRKPNPGRVHVAHILIAFPKDSAIQDSSAFLAKAQAIYKQVQEGADFGELAKEYSGD 277 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 G + ++ F+ + + T+ G I + DK+ Sbjct: 278 AASAKKGGVLPWFGIGEMVQPFEQAAFALSKPGDLSGVVETRFGYHIIKLIDKKGRPSFE 337 Query: 283 ALKAYLSAQNTPTKIE-KHEAEYVKKLRSN 311 + LS + + + + +++ Sbjct: 338 EEEKALSRRMGQGERNFELYKAFDDRMKKE 367 Score = 40.4 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 28/262 (10%), Positives = 58/262 (22%), Gaps = 40/262 (15%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 +LI + V+ + S + T+ G+ + + Sbjct: 4 LLISLGVFACVTVNAQIASDSVVMTVAGKQVPLSEF------------------------ 39 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + S +V+ +N L + S Q Sbjct: 40 -----IFIAEKNGEVDLSSTKSVKSYVELFKNFKLKVAEAESLGIDQTSSFKSELDGYRA 94 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q + E E A + L + ++ V + Sbjct: 95 QL---------IDSYMSDKEGEKAAARAVYDRGDHSVELTYILFRLPEKTVSKDTVAVYQ 145 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY--LLESDLHPQFQNLLKKSQNNTT 258 E + + A K + + L L + Sbjct: 146 EAMRVYERLQKGEDMETVGKALAEKDKEHVACEYVRCLLPMQSLKVFEDAAYSLPIGVVS 205 Query: 259 NPYVTQKGVEYIAICDKRDLGG 280 P T+ G I + ++ G Sbjct: 206 EPVRTKLGFHLIKVHSRKPNPG 227 >gi|56476305|ref|YP_157894.1| rotamase [Aromatoleum aromaticum EbN1] gi|56312348|emb|CAI06993.1| probable rotamase [Aromatoleum aromaticum EbN1] Length = 256 Score = 67.0 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 20/201 (9%), Positives = 56/201 (27%), Gaps = 7/201 (3%) Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 A + + + + A Q +V + + E Sbjct: 24 FAVRKLSDEARARTLDAGERWKIDASMERAAAQVQLDHLVNGQELPDFDKAAREFYVAHP 83 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + + ++ S +K + ++ + A + K + + S Sbjct: 84 EQFVQPEQVHAQHVLIKSEGRSKEEALVLAKQVVAQANKDSQDFGKLAAEFTEDPSG--K 141 Query: 229 VSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIA 283 + G + + F++ + KS P +Q G I + +++ + + Sbjct: 142 ANGGDLGFFARGSMVKPFEDAIFGLKSPGEIVGPVESQFGFHVIRLVERKAETTIPFDEV 201 Query: 284 LKAYLSAQNTPTKIEKHEAEY 304 + + + EY Sbjct: 202 KDKLVRDETLKYRRMAIGKEY 222 >gi|262383886|ref|ZP_06077022.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262294784|gb|EEY82716.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 533 Score = 67.0 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 12/150 (8%), Positives = 44/150 (29%), Gaps = 4/150 (2%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-S 224 K + ++ ++ D+ +Q+ + + + ++++ Sbjct: 229 KVHSRKPNPGQVHVAHILIAFPKDSAIQDSSAFLAKAQAIYKQVQEGADFGELAKEYSGD 288 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 G + ++ F+ + + T+ G I + DK+ Sbjct: 289 AASAKKGGGLPWFGVGEMVQPFEQAAFALSKPGDLSGVVETRFGYHIIKLIDKKGRPSFE 348 Query: 283 ALKAYLSAQNTPTKIE-KHEAEYVKKLRSN 311 + LS + + + + +++ Sbjct: 349 EEEKALSRRMGQGERNFELYKAFDDRMKKE 378 Score = 43.9 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 30/301 (9%), Positives = 69/301 (22%), Gaps = 41/301 (13%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + +K +LI + V+ + S + T+ G+ + + Sbjct: 3 IRAMVKEFLMKKLLISLGVFACVTVNAQIASDSVVMTVAGKQVPLSEF------------ 50 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + + + +V+ +N L + S Q Sbjct: 51 -----------------IFIAEKNGEVDLSNTKSVKSYVELFKNFKLKVAEAESLGIDQT 93 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 Q + E E A + L + Sbjct: 94 SSFKSELDGYRAQL---------IDSYMSDKEGEKAAARAVYDRGDHSVELTHILFRLPE 144 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY--LLESDLHPQF 246 ++ V + E + + A K + + L L Sbjct: 145 KTVSKDTVAVYQEAMRVYERLQKGEDMETVGKALAEKDKEHVACEYVRCLLPMQSLKVFE 204 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 + P T+ G I + ++ G A++ + + ++ Sbjct: 205 DAAYSLPIGVVSEPVRTKLGFHLIKVHSRKPNPG-QVHVAHILIAFPKDSAIQDSSAFLA 263 Query: 307 K 307 K Sbjct: 264 K 264 >gi|221215735|ref|ZP_03588696.1| ppic-type ppiase domain protein [Burkholderia multivorans CGD1] gi|221164437|gb|EED96922.1| ppic-type ppiase domain protein [Burkholderia multivorans CGD1] Length = 262 Score = 67.0 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 52/173 (30%), Gaps = 7/173 (4%) Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + + + R ++ +++R + A Sbjct: 78 ERELTHVPEPDRADCERYYAQHPARFRRNDIVYASHVLFAVTDRVPLAPLRQRAERALAD 137 Query: 209 RLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQK 265 + P + ++ G +L D P+F+ L + T+ Sbjct: 138 VVAAPDTFDAVARASSNCPSAQVGGSLGQVLRGDTVPEFEAALFDTDGLGVLPKLVNTRF 197 Query: 266 GVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 G + I D+R D A+ A ++A T ++ +YV L A I Sbjct: 198 GFHIVRI-DRRVAGDTVPFDAVAAQIAAHLTARVRQRAMRQYVAILAGGARIE 249 >gi|220935707|ref|YP_002514606.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thioalkalivibrio sp. HL-EbGR7] gi|219997017|gb|ACL73619.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thioalkalivibrio sp. HL-EbGR7] Length = 93 Score = 67.0 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 28/80 (35%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 ++ + + ++++S G+ + P+F ++ + N Sbjct: 14 EELCNELKARIEAGEDFAALAKEYSSCPSGQQGGELGRFGRGQMVPEFDRVVFSAPVNTV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|162455542|ref|YP_001617909.1| hypothetical protein sce7260 [Sorangium cellulosum 'So ce 56'] gi|161166124|emb|CAN97429.1| unnamed protein product [Sorangium cellulosum 'So ce 56'] Length = 358 Score = 67.0 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 29/301 (9%), Positives = 63/301 (20%), Gaps = 52/301 (17%) Query: 36 WAMSSRIRTTINGEVITDGD----ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91 S+R+ + VIT GD + + +L+ E + + ELI L E Sbjct: 42 AEQSARVLAKVGDRVITLGDFGRTLERMDQFDRLRYQTKERRRELLSELIDAELLALEAR 101 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 + G+ D + A Sbjct: 102 RRGLDKDPAVEDTIRQILREAMIARARKGLPAPA-------------------------- 135 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 E+ K + ++ + QK + L Sbjct: 136 ---DIPASEVRAYYEANADKFSEPERRRVAAIVVGDRALGEKVLKEAQKAGSSSAWGELF 192 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLH-------PQFQNLLKKSQNNTT----NP 260 + ++ G+ + P+ Sbjct: 193 FKHSLTAPKDKSAAPPLDLAGELGIVSPPGDPRGAHPRVPEPVRAAAFRIGGVGAVGEEL 252 Query: 261 YVTQKGVEYIAICD-----KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + +R+ + + K++ E +LR + Sbjct: 253 VEADGRFFIVRLNGLTGGHRRE---FAEAERSIRVALLQQKMQDQERALEDELRKKFPVE 309 Query: 316 Y 316 Sbjct: 310 I 310 >gi|285808228|gb|ADC35762.1| peptidyl-prolyl [uncultured bacterium 293] Length = 640 Score = 67.0 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 30/284 (10%), Positives = 78/284 (27%), Gaps = 24/284 (8%) Query: 47 NGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLK----------KQEIEKSGIT 96 GE + +I +R+AL + + + ++L+V+ L Q+ EK Sbjct: 125 GGEFVGTDEIRRRLALQGISEDEKA--EQVREQLLVQRLYALVTDGVHVSDQDAEKEFRR 182 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-FMLK 155 + A A + + + + I ++ + Sbjct: 183 SSEKVKVEYVAVDAAPFATRATATDEEVAARFQSRREAYRIPERRVIGYLLLDAMALSKE 242 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN------QGFVQKRIKDAEESR 209 +++I + + + + + + + + + + Sbjct: 243 VKVSDVDIRTYYEDHETQFQQPDEACARHIEVKVKQTADAPAGHTEEEARVLAQKLLDQV 302 Query: 210 LRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQ-KG 266 +K + G P+ Q + N ++ TQ G Sbjct: 303 KGGADFAEVAKKSSEDPGTSSRGGDLGCGGPETWGPELGQAIFTLPVNQVSDLIRTQAHG 362 Query: 267 VEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + +R G + ++K + K + E K+ Sbjct: 363 FHIVQVLSRRQQGVQPLDSVKEGIRHILVQGKTRELAEERSSKI 406 Score = 55.8 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 54/181 (29%), Gaps = 15/181 (8%) Query: 12 FIKLLTTYFVLIIFCI-VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70 ++K + VL + +P + E IT G+ + + + Sbjct: 12 WLKYMLLAVVLAFILLYIPAFQAGPGGGPGEEVARVGQEKITAGEFDRAFSRQRDALREQ 71 Query: 71 ----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA--- 117 + + + LI L QE + G+ D V + ++ G Sbjct: 72 GVDPAMLEQLGVREEVLNGLIDGKLIVQEARRLGLAVDDEAVAAQIHREYQSRGGEFVGT 131 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 ++ L QGI ++ + + Q + + + + ++ E Sbjct: 132 DEIRRRLALQGISEDEKAEQVREQLLVQRL-YALVTDGVHVSDQDAEKEFRRSSEKVKVE 190 Query: 178 Y 178 Y Sbjct: 191 Y 191 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 10/90 (11%), Positives = 23/90 (25%), Gaps = 7/90 (7%) Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALK 285 S G + + G + + +K A K Sbjct: 545 GQSFGDLGTNQA-----LEDAAFSLPVQGLSEALPSPGGYAVLRVLEKTPFDPAAFAAQK 599 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 A + ++ + + Y+++ R I Sbjct: 600 AEVVSKLEQQQKRQLFQAYIERARDRFPIE 629 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 3/79 (3%) Query: 237 LLESDLHPQFQNLLKKSQNNT-TNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNT 293 + D + + P+ T +G +I + D + ++ + A Sbjct: 439 VPPLDSPDLLARAFTLKRGESNPEPFGTAQGWLFIDVLDIQAPRLPELAEVQDRVRADLQ 498 Query: 294 PTKIEKHEAEYVKKLRSNA 312 K + +LR+ A Sbjct: 499 DEKARALARDKAVQLRAQA 517 >gi|330836698|ref|YP_004411339.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta coccoides DSM 17374] gi|329748601|gb|AEC01957.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta coccoides DSM 17374] Length = 92 Score = 67.0 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 11/92 (11%), Positives = 23/92 (25%), Gaps = 1/92 (1%) Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + + + ++ G + + +F Sbjct: 1 MEWKASHILVKEKALADRLYAQIKGGADFSSLARTHSTCPSKSKGGDLGWFGPGKMVGEF 60 Query: 247 QNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277 + ++K S + P TQ G I RD Sbjct: 61 ERAVQKLSHGAVSAPIRTQFGYHIIKKTGLRD 92 >gi|91793843|ref|YP_563494.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella denitrificans OS217] gi|91715845|gb|ABE55771.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella denitrificans OS217] Length = 625 Score = 67.0 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 27/265 (10%), Positives = 63/265 (23%), Gaps = 8/265 (3%) Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 + + K + + L+ K T + ++ N Sbjct: 144 QLGYQAVSFKNMMRVDMTRRQLLSALVGSEFALDGEAKQLAEVQGQTRDIRYLTVESNQF 203 Query: 115 LSAED--FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 L+ + + + + ++ + E+ A + + Sbjct: 204 LADNSVTDEEAQAYYDANQSQYLSPEKVSLEYLELNVAELAKDITTSPEEVKAYYDEHQK 263 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSI 231 I NK + + + + + Sbjct: 264 QYQTAEKRLAAHILI--NKSDDDAADEAKAAAILAKLTAGESFEALAKTDSEDKFSGEQG 321 Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYL 288 GK + + P F + L + + T+ G I + D + L ++A + Sbjct: 322 GKLDWFEPGVMAPAFDEALFSLEKGAHSGLVSTEFGYHIIKLLDVQAGQLAPFADVEAKI 381 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAI 313 AQ K KL + Sbjct: 382 VAQIQEKKALDKFYGLQTKLADTSY 406 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 19/217 (8%), Positives = 59/217 (27%), Gaps = 20/217 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + V+ F + SY + +NG+ ++ ++ + Sbjct: 1 MLEKIREGSQGVVAKGILVLVIFSFAFAGVSSYLGTST-DLPVAIVNGDEVSTSELEQAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +++ +++L+ + L Q G+ + Sbjct: 60 QNERSRIEQQLGDMFETLAADDTYMAGIKQSVLEKLVGDKLIDQAAFALGLRVSDEQIKQ 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNH---FKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 V D S + FK + + ++ ++ Sbjct: 120 AIVSEPAFQTDGVFDNSRYQAVLRQLGYQAVSFKNMMRVDMTRRQLLSALVGSEFALDGE 179 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + + +R + + F ++ + Sbjct: 180 AKQLAEVQGQTRDIRYLTVESNQFLADNSVTDEEAQA 216 Score = 42.7 bits (98), Expect = 0.070, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 34/125 (27%), Gaps = 1/125 (0%) Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 Q + + A E +L + +Q + FQ + Sbjct: 497 QQDKAKEAALNKAVEYMAQLKDSTFDASSLSLTTQAKLGRYSQDVDSGIAAKAFQMPVPA 556 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + G I + G + + + + TP E + L++ Sbjct: 557 KDAVSIDTAELASGYAIILLDKVNPAEGINDNVLSAMKQRLTPQYSEADYRGLIASLKAK 616 Query: 312 AIIHY 316 A I Y Sbjct: 617 ADIEY 621 >gi|260568390|ref|ZP_05838859.1| LOW QUALITY PROTEIN: PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 4 str. 40] gi|260155055|gb|EEW90136.1| LOW QUALITY PROTEIN: PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 4 str. 40] Length = 193 Score = 67.0 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 21/170 (12%), Positives = 51/170 (30%), Gaps = 6/170 (3%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 D + N + ++ + P ++ Q + A Sbjct: 12 RDVPSASRDEAQRYYENNRHRFTSAPILEASHILIAADPADQETRDAARQTATRLAAAVI 71 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN--PYVTQKGV 267 + +++S G L P+F+ L++ T P ++ G Sbjct: 72 AEPATFASVALEYSSCPSGAQGGNLGQLTRGSTVPEFERALERMTPGETTANPIESRFGY 131 Query: 268 EYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + D+R + + ++ + K ++Y+ L + A I Sbjct: 132 HIVRL-DRRVEGEELPFDYVVDKIAGWLEASTWSKAVSQYIAILAAEAEI 180 >gi|311695520|gb|ADP98393.1| PpiC-type peptidyl-prolyl cis-trans isomerase [marine bacterium HP15] Length = 94 Score = 67.0 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 27/78 (34%), Gaps = 1/78 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 + + ++ +++ ++ +S + G + P+F + + N Sbjct: 16 EAKCEELKKAIEGGQDFAEVAKQHSSCPSGRNGGDLGSFGPGQMVPEFDKAVFNGELNTV 75 Query: 258 TNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 76 IGPVKTQFGYHLLEVTSR 93 >gi|53803327|ref|YP_114963.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Methylococcus capsulatus str. Bath] gi|53757088|gb|AAU91379.1| PpiC-type peptidylprolyl isomerase domain protein [Methylococcus capsulatus str. Bath] Length = 312 Score = 67.0 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 21/180 (11%), Positives = 46/180 (25%), Gaps = 6/180 (3%) Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + K F L E + +N ++R Sbjct: 118 AFQKLAKEHFPLPPVPEEDAVYKYYLDHQNDYGIPEMVRISQIQFRVPDNATAEQKAAAR 177 Query: 203 KDAEESRLRLPKDCNK---LEKFASKIHD-VSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 + AE + RL + G +L + + T Sbjct: 178 QRAEAALRRLEAGEPFPKVAGELTENPSAKPPQGDIGFLPREGDPWLTEAVRNLKVGEHT 237 Query: 259 NPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G E + + D R + ++ + + + + Y++ L +A I Sbjct: 238 KVIESPAGYEILMLTDVRKALITPYVNVRDKVIQRMRGAEQARLRDAYIRDLAKHAKIEI 297 >gi|283780046|ref|YP_003370801.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pirellula staleyi DSM 6068] gi|283438499|gb|ADB16941.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pirellula staleyi DSM 6068] Length = 724 Score = 67.0 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 24/283 (8%), Positives = 71/283 (25%), Gaps = 34/283 (12%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 ++ +NGE IT D+ + ++ ++ L I Sbjct: 143 QVMAVVNGEQITRTDLGRECMR--------RFGNEVLESMLNRQLILDACAAQNIVITEQ 194 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 V+ + A GL + + L ++ ++ K Sbjct: 195 DVDDEVDRIANKFGLPRDRWLQLLREERGFSEQEY--RTTVVWQMIALRRLVADKIQVTP 252 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ ++ + R + +K + + + + + Sbjct: 253 EELKMAF---ESEFGPKVRARMI----------AVSSKEKADQVLAAAAAKPESFGDLAK 299 Query: 221 KFASKIHDVSIGKAQYLLESDL----HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 ++ S + + Q ++ + ++ Sbjct: 300 QYCEDPAVASAR--GVIPPIRMHTGDPTLEQIAFSLKPGELSSVIKVANLYYILLCDEQV 357 Query: 277 DLGGEIA-----LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + L+ + K+ A++ + +R +A + Sbjct: 358 PRMVLAPQHIPAQQERLTDKLRENKLRVSAAQFFENMRKSAQV 400 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 24/285 (8%), Positives = 71/285 (24%), Gaps = 28/285 (9%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 + TING ++ +S+ + ++ I L +Q++ K + Sbjct: 416 VAATINGRPVSMLQLSEEC--------ISRNGESVLEGEINRKLLEQQLAKRKLVITQQD 467 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGI-----GDNHFKQYLAIQSIWPDVVKNDFMLKY 156 ++ + A + G D + +++ Y+ +K + Sbjct: 468 IDAEVARAAASFGFVKADQTPDVERWMKTVIDEQGATPDLYIRDAVWPSVALKKLVGNRV 527 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 E ++ + V +++ + + Sbjct: 528 EVTEEDLQKGYESNYGPRVEVLACVL-----------TDQRQAQKVWEMARANPTNDFFA 576 Query: 217 NKLEKFASKIHDV-SIGKAQYLLE-SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274 +++ + + G+ + + K + + Sbjct: 577 ELARQYSVEPSSRSNGGQVPPIRRYGGGAAIEEEAFKLKAGELSGLIAVGDQYIILRCLG 636 Query: 275 KRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + +K L A K+ ++A I + Sbjct: 637 RTSPVKADFATVKDELVADIQEKKLRILMNSEFDNTVASAQIDNF 681 >gi|301104936|ref|XP_002901552.1| PpiC-type peptidyl-prolyl cis-trans isomerase, putative [Phytophthora infestans T30-4] gi|262100556|gb|EEY58608.1| PpiC-type peptidyl-prolyl cis-trans isomerase, putative [Phytophthora infestans T30-4] Length = 265 Score = 67.0 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 12/129 (9%), Positives = 32/129 (24%) Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + ++ ++ + + + E+ K ++ + Sbjct: 15 CCIASVAGQDAAPVAIQAHASHILVDTEAEADDLSVQLGEASNLFLKFAQLAKEHSKCPS 74 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 G + P+F + + + + TQ G + I + D E Sbjct: 75 SRKGGDLGTFDRGQMVPEFDKVAFEGEIGVVHKVKTQFGWHLVLISRRLDGTEEPDKYRD 134 Query: 288 LSAQNTPTK 296 L Sbjct: 135 LKQALLKIM 143 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 30/88 (34%) Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 ++++ K K+ + + + K K ++ G ++ PQF Sbjct: 171 FHILVKSEDEADKLFKEIDAAEDKKTKLSELAGKHSTCPSGKKGGDLGMFGRGEMVPQFD 230 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDK 275 ++ + + TQ G + ++ Sbjct: 231 KVVFEGEVGELAKVQTQFGWHVLLCTER 258 >gi|163781832|ref|ZP_02176832.1| hypothetical protein HG1285_03078 [Hydrogenivirga sp. 128-5-R1-1] gi|159883052|gb|EDP76556.1| hypothetical protein HG1285_03078 [Hydrogenivirga sp. 128-5-R1-1] Length = 437 Score = 67.0 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 29/319 (9%), Positives = 87/319 (27%), Gaps = 28/319 (8%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE- 73 ++ + +F + + K R +N I+ + + + + EL Sbjct: 15 IIAVASLSFLFWMFSVSDIKQMFGLQRCAAAVNDYCISLREFNHELRKYQSLLEKEELRT 74 Query: 74 ---KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129 + + LI L Q+ G+ V + + F + + Sbjct: 75 LVKRQVLFSLINRELLYQKALDVGVVASDREVAELIKKDPQFQEGGKFSFKLYAETLERA 134 Query: 130 --GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL------IR 181 ++ YL +++ E+ ++ + ++ Sbjct: 135 GLTPVEYEGYLKKSLTIRKLLR-FIKSGTYLSPKELEFQERILSARFSGRAYLLNASSVK 193 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQY 236 + + ++ R R+ + +K + + + G Sbjct: 194 LDYKPTLEELKEFYSRNAEKFSLPSVKRFRVWETADKGKAQSIYRELKRGKVPEGGSL-- 251 Query: 237 LLESDLHPQFQNLLKKSQNNTTNPY---VTQKGVEYIAICDKRD--LGGEIALKAYLSAQ 291 E +L ++ ++ + T P+ + I + + + + + Sbjct: 252 FKEEELPSALKDTVRNLK--VTEPFTLTKVKGKYYVIYLEESSPGRVKSFEEARKDIEKL 309 Query: 292 NTPTKIEKHEAEYVKKLRS 310 K + + ++LR Sbjct: 310 LVEEKKAELVEKKARELRE 328 Score = 37.7 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 28/237 (11%), Positives = 71/237 (29%), Gaps = 9/237 (3%) Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E LK+ + + + + A + K G + FK+ + Sbjct: 201 EELKEFYSRNAEKFSLPSVKRFRVWETADKGKAQSIYRELKRGKVPEGGSLFKEEELPSA 260 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN---KLQNQGFVQ 199 + V + +++ ++ + + + + V+ Sbjct: 261 LKDTVRNLKVTEPFTLTKVKGKYYVIYLEESSPGRVKSFEEARKDIEKLLVEEKKAELVE 320 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 K+ ++ E + + +K +F + + ++ + L S++ Sbjct: 321 KKARELRELLSKGARVDHKHVRFDNSTVEE------FITLFKIQGDEVLRLVFSEDRVFG 374 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 PY T G + I + I + L K++ + + +KL A I Sbjct: 375 PYRTAGGYAVVYIEKRSFDSKNIKNRGQLEDSLLNAKLDSLVSLFAEKLAEEADIQI 431 >gi|307545440|ref|YP_003897919.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halomonas elongata DSM 2581] gi|307217464|emb|CBV42734.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halomonas elongata DSM 2581] Length = 270 Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 24/292 (8%), Positives = 68/292 (23%), Gaps = 43/292 (14%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 + I A +S I + +I + +I++ + K A ++ E L + Sbjct: 4 IAIEQLPGGATASSI--RVGETLIEEDEIAREMQYHPADSAGDAHFKAARALVVRELLCQ 61 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + + E + + + + Sbjct: 62 RAEHLGLAGDSQDDSEAAIAALLDRELEVPEPTEADCRRFHAAHPERFRE------PTRL 115 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 +L + E + + + F+ Sbjct: 116 EVRHVLLAAAPDDAEARDAGYRQGRRLIEQLTEHPERFT--------------------- 154 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN-PYVTQKG 266 ++ ++ G+ +L P+ L+ + P ++ G Sbjct: 155 ---------ELAQRHSACPSKDQGGELGWLQPGQTVPELDRALQHLPVGLHDRPLASRYG 205 Query: 267 VEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + D+R + + + Y+ L + + Sbjct: 206 WHVV-VIDRRVEGREPAFERVVDRVRHCLREQASRRALRHYLLALVAEIGVK 256 >gi|328465802|gb|EGF36990.1| protein export protein [Listeria monocytogenes 1816] Length = 266 Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 28/296 (9%), Positives = 81/296 (27%), Gaps = 40/296 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + ++ + S + + T + +T ++ + + Sbjct: 1 MKKKLILGLVMMMALFSLAACGGGGDVVKT-DSGDVTQDELYDAMK--------DKYGSE 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 VQ+L E + + + S D + + + Sbjct: 52 FVQQLTFEKILGDKYKVSDEDVD------------KKFNEYKSQYGDQFSAVLAQSGLTE 99 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + +V+ + + + + Sbjct: 100 KSFKSQLKYNLLVQKATEANTDTSDKTLKKYYET---------------WQPDITVSHIL 144 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--K 252 + + K+ E+ K + +++++ + G+ + P F+ K Sbjct: 145 VADENKAKEVEQKLKDGAKFADLAKEYSTDTATKDNGGQLAPFGPGKMDPAFEKAAYALK 204 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKK 307 ++ + + P TQ G I + K + A ++ + +KK Sbjct: 205 NKGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKK 260 >gi|121997086|ref|YP_001001873.1| NifZ family protein [Halorhodospira halophila SL1] gi|121588491|gb|ABM61071.1| NifZ family protein [Halorhodospira halophila SL1] Length = 321 Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 45/161 (27%), Gaps = 9/161 (5%) Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK---- 214 + ++ + R+ I N + Q+ AE+ +L Sbjct: 152 TDEDVERFYHENPERFRRDETRTVRHLLITINDDFPENTRQRAWARAEKLTGKLAADPRG 211 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAIC 273 E+ + + G + LH + L + + P T G+ + +C Sbjct: 212 FAAAAERHSECPSALHGGLVGRVPRGQLHEELDAALFEMAAGEVRGPVETAMGLHVL-LC 270 Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + L L + E+ + R A I Sbjct: 271 ETIHPPDVAPLDDELRERIRGALQEQRARQVQ---RDRARI 308 >gi|300694578|ref|YP_003750551.1| isomerase [Ralstonia solanacearum PSI07] gi|299076615|emb|CBJ35952.1| putative isomerase [Ralstonia solanacearum PSI07] Length = 278 Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 32/286 (11%), Positives = 80/286 (27%), Gaps = 54/286 (18%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 + T+NG +T + + IA +Q ++ + Q+LI L +Q+ K+ Sbjct: 32 VIATVNGTPVTQEQLDRVIAQSGVQANP-QIAQALKQQLIARELFRQQAAKNPAYEKLPV 90 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 V +I +K++ E Sbjct: 91 VKQAMQ-----------------------------EAHDAAITQAWLKDNIKPAPVTDEQ 121 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + ++ +EY + Q +++ ++ Sbjct: 122 VKARYDAIVASLGDKEYKAHVIQLGDDVTAAQVLAQLKQ-----------GGDFAKLAQQ 170 Query: 222 FASKIHDVSIGKAQYL---------LESDLH-PQFQNLLKKSQNNTT-NPYVTQKGVEYI 270 +++ + V G ++ +L P + + + T+ P + Sbjct: 171 YSTAPNKVRGGDMDWVSFKVPAEEGKTQNLPLPLAREIAALAVGATSTAPVEVGSQRYLV 230 Query: 271 AICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + R + +K + ++E+ + V L A + Sbjct: 231 KVDAARPTQVPAYDVVKPAIRQALETAELERVTVQVVGGLLKQAKV 276 >gi|319761234|ref|YP_004125171.1| ppic-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus denitrificans BC] gi|317115795|gb|ADU98283.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus denitrificans BC] Length = 275 Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 14/167 (8%), Positives = 48/167 (28%), Gaps = 8/167 (4%) Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL----RL 212 E + +R + +++R + Sbjct: 96 EPSEEACRRYHAAHPTLHGEGERLRLRHVLFAVTPGVDVKQLRQRAESVLLDLRCADDGG 155 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKGVEYI 270 + ++++ G+ +L ++D P+F + + ++ G+ + Sbjct: 156 VRFAEAARQWSNCPSGQQGGELGWLTQADCAPEFAREIFGKAEVGVLSRLVHSRFGLHVV 215 Query: 271 AICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 +C++ ++A ++ +Y++ L A + Sbjct: 216 EVCEREAGRALVFEEVQASVALLLRQQAWINALRQYLQLLAGAAEVE 262 >gi|294507824|ref|YP_003571882.1| PPIC-type PPIASE domain protein [Salinibacter ruber M8] gi|294344152|emb|CBH24930.1| PPIC-type PPIASE domain protein [Salinibacter ruber M8] Length = 685 Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 13/109 (11%), Positives = 33/109 (30%), Gaps = 4/109 (3%) Query: 207 ESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVT 263 E R +++ G + L P + + S + T Sbjct: 295 EIRDGPLSFAAAAREYSQDRQSASEGGALGEVTPRALPPPLRKTVAALDSAGAVSGIVQT 354 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSN 311 + G + + D+ + + L + + E+ A + + +R+ Sbjct: 355 RFGYHLLKLIDRSERPSFDEAYSELKDRLVGQPRAEERTAAFARTVRAE 403 Score = 50.4 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 25/316 (7%), Positives = 68/316 (21%), Gaps = 55/316 (17%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVS------YKSWAMSSRIRTTINGEVITDGDISKRIA 61 S+ + + +F+ ++ + I +T ++ Sbjct: 19 SMIRLGRTVGVFFLAVLGMACSSGPEATEVPSSAPPPDDTIVARYADTTLTLAELDSA-- 76 Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 S F+ + L Sbjct: 77 -----------------------FVDAAGGPQAAADSSLRAYRDFLDRYLHFRLKVRAAR 113 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 + P +++ + E Sbjct: 114 DAGLDTLPRIRREVHDYRQERARPQLLRTEVYAPLARTLYERRTQAVD------------ 161 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS------IGKAQ 235 I + + + +S R + + + + G+ Sbjct: 162 VSHILIRPTSSSDTLAAYREAQAIADSVGRGVPFGDLALRNSDAPAARTEGRRGYRGRLG 221 Query: 236 YLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 YL D+ F++ + T++ + T+ G + + D+R + L+ Sbjct: 222 YLQAGDIVEPFEDRMYAVPPGGTSDIFRTKFGYHILKVHDRRPAAQPV----ELAHILRR 277 Query: 295 TKIEKH-EAEYVKKLR 309 + + + LR Sbjct: 278 PQGDSATSRRLLDSLR 293 >gi|242280654|ref|YP_002992783.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio salexigens DSM 2638] gi|242123548|gb|ACS81244.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio salexigens DSM 2638] Length = 93 Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 24/80 (30%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 ++ D ++ +K +S G + P+F ++ Sbjct: 14 EQTCLDLKKQIQDGADFGEVAKKHSSCPSGQRGGDLGEFRPGQMVPEFDTVVFNEAVGEV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + I + D Sbjct: 74 HGPVKTQFGYHLLIIDSRED 93 >gi|146281286|ref|YP_001171439.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas stutzeri A1501] gi|145569491|gb|ABP78597.1| probable peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas stutzeri A1501] Length = 344 Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 16/174 (9%), Positives = 54/174 (31%), Gaps = 5/174 (2%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 +++ + L + + R +L + P + + + +++ Sbjct: 158 LIEQEVPLPLADEAACQQYYNGNRQRFFSAPLLAARHILLACPADDAEARSLAREQALGL 217 Query: 206 EESRLRLPK-DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVT 263 + P+ + ++ G + + P+F+ L + P + Sbjct: 218 LQQLQAAPQRFAELALQHSACPSKEQGGALGQISKGQTVPEFERQLFRLPVGLCQQPLES 277 Query: 264 QKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + G + + + + + + A+ + ++Y++ L A I Sbjct: 278 RYGYHLVFVDQRIEGEQLPYEIVAGTIRAELNQRVWQIGVSQYLQNLVGAANIE 331 >gi|83646167|ref|YP_434602.1| parvulin-like peptidyl-prolyl isomerase [Hahella chejuensis KCTC 2396] gi|83634210|gb|ABC30177.1| Parvulin-like peptidyl-prolyl isomerase [Hahella chejuensis KCTC 2396] Length = 316 Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 35/316 (11%), Positives = 90/316 (28%), Gaps = 47/316 (14%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F + F K + + + ++++ +NG I+ ++ +A Sbjct: 1 MFLHRTSFPK--FVFLAALTGSLAGCGGAGEATDATQVVAKVNGSEISIHQLNAILAKQP 58 Query: 65 LQKINGEL-EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 Q ++ + A+ EL+ + + + + + + V Sbjct: 59 AQGVSSDTARARALDELVEQQVAYDKAVELKLDRSPDVVMAI------------------ 100 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIR 181 + + I ++ + EI Q+ + Y ++ Sbjct: 101 ------------ESMKKSIIARAYLQQVIGALSQPSQEEIHQYYQEHPALFAERKLYSLQ 148 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + D L E+ L + + A+ IG Sbjct: 149 EIAIEPRDELLAPLRNKVGNAGQLEDIVAWLKAEGVQYRVNAANRSAEQIGL-------- 200 Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC-DKRDLGGEIALKAYLSAQNTPTKIEKH 300 + + T + + + ++ E K ++ K++K Sbjct: 201 --ELLTQVARLEDGAMT-LFQGPNNYLVVRVAASQKRPVSEEDAKPRITQFLHNRKVKKA 257 Query: 301 EAEYVKKLRSNAIIHY 316 + V++L+S+A I Y Sbjct: 258 VTDEVERLKSSAAIEY 273 >gi|229073881|ref|ZP_04206965.1| Foldase protein prsA 1 [Bacillus cereus F65185] gi|228709250|gb|EEL61340.1| Foldase protein prsA 1 [Bacillus cereus F65185] Length = 286 Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 19/205 (9%), Positives = 53/205 (25%), Gaps = 7/205 (3%) Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 D D + + S + + + + + + Sbjct: 72 DKYKVSDDETKKKVDELKKEMGDSFKSYLTQKNVRNEDELKDKLKTQMAFEKAIKASITE 131 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 + +K K+ +E ++ + G+ L Sbjct: 132 KEIKDYYKPILKVSHILVKDEKMAKEIKEKINNGEDFTTLAKEHSEDPGSKEKGGELGEL 191 Query: 238 LESDL----HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293 + + K + P + G I + +K++L K ++ + Sbjct: 192 NAFQMDRMDPKFKEATYKLEAGQVSEPIKSSFGYHIIKMTEKKELKTFNQEKENINKELE 251 Query: 294 PTKI--EKHEAEYVKKLRSNAIIHY 316 ++ ++ + ++ K L A I Sbjct: 252 AKRLTDQQWQQKFFKDLFKQADIKI 276 >gi|255318960|ref|ZP_05360185.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter radioresistens SK82] gi|262378304|ref|ZP_06071461.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter radioresistens SH164] gi|255303977|gb|EET83169.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter radioresistens SK82] gi|262299589|gb|EEY87501.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter radioresistens SH164] Length = 623 Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 51/398 (12%), Positives = 105/398 (26%), Gaps = 91/398 (22%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + ++ ++ L V I Y S + T+NG+ I+ ++ Sbjct: 1 MESFRKVIKGWLGIVLLILFLTPLAFVGIEGYFSGGNKENVAATVNGQEISKKELESLTK 60 Query: 62 LLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQ 108 K Q +++ A+ LI + L Q+ EK GI+ + Sbjct: 61 SYKEQYLNFVNGDETLLNQPFIQQTALDHLIAQNLILQQAEKLGISLSDAQIEQMLAQQP 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN------------------ 150 + G ++ + + Q ++ + Sbjct: 121 SFQQNGQFSQTLYENYLRSVGLTSQGLIANLRQDHALKMLNSTFVDYTLVSKVDMNQIAN 180 Query: 151 ----------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRT------------ 182 ++ + +I QK KN + + Sbjct: 181 LQTEQRTLFLSSIPLDEYKKNIQVSQQDIANYYQKHKNSFKQTAHVDVDYIVLSPEQVNT 240 Query: 183 --------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--------- 225 L N ++ Q KR ++ N+ +K A++ Sbjct: 241 KAAPVTDAELQQAYANFVEAQNKNAKREVKHILIATSDTRNENQAQKLANEVYAKIQGGT 300 Query: 226 -------------IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIA 271 G + F + +L N + P TQ G I Sbjct: 301 NFAQAAAQYSDDIDSKTKGGLIESYQTGVYSEAFDKAVLGLKANQISQPVKTQYGYHIIQ 360 Query: 272 ICD-KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 +++ A K+ L+A+ +K+ + V L Sbjct: 361 AQTLAQNIPSFEAEKSRLAAEIQKSKVANLFTDTVNSL 398 >gi|83814441|ref|YP_445914.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Salinibacter ruber DSM 13855] gi|83755835|gb|ABC43948.1| PPIC-type PPIASE domain protein [Salinibacter ruber DSM 13855] Length = 685 Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 13/109 (11%), Positives = 33/109 (30%), Gaps = 4/109 (3%) Query: 207 ESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVT 263 E R +++ G + L P + + S + T Sbjct: 295 EIRDGPLSFAAAAREYSQDRQSASKGGALGEVTPRALPPPLRKTVAALDSAGAVSGIVQT 354 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSN 311 + G + + D+ + + L + + E+ A + + +R+ Sbjct: 355 RFGYHLLKLIDRSERPSFDEAYSELKDRLVGQPRAEERTAAFARTVRAE 403 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 25/316 (7%), Positives = 68/316 (21%), Gaps = 55/316 (17%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVS------YKSWAMSSRIRTTINGEVITDGDISKRIA 61 S+ + + +F+ ++ + I +T ++ Sbjct: 19 SMIRLGRTVGVFFLAVLGMACSSGPEATEVPSSAPPPDDAIVARYADTTLTLAELDSA-- 76 Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 S F+ + L Sbjct: 77 -----------------------FVDAAGGPQAAADSSLRAYRDFLDRYLHFRLKVRAAR 113 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 + P +++ + E Sbjct: 114 DAGLDTLPRIRREVHDYRQERARPQLLRTEVYAPLARTLYERRTQAVD------------ 161 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS------IGKAQ 235 I + + + +S R + + + + G+ Sbjct: 162 VSHILIRPASSSDTLAAYREAQAIADSVGRGVPFGDLALRNSDAPAARTEGRRGYRGRLG 221 Query: 236 YLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 YL D+ F++ + T++ + T+ G + + D+R + L+ Sbjct: 222 YLQAGDIVEPFEDRMYAVPPGGTSDIFRTKFGYHILKVHDRRPAAQPV----ELAHILRR 277 Query: 295 TKIEKH-EAEYVKKLR 309 + + + LR Sbjct: 278 PQGDSATSRRLLDSLR 293 >gi|332974542|gb|EGK11462.1| peptidyl-prolyl cis-trans isomerase [Kingella kingae ATCC 23330] Length = 293 Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 80/297 (26%), Gaps = 21/297 (7%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-----ELEKIAVQ 78 +F + ++ + T+NG I ++ R ++ Q EL + Sbjct: 6 LFAAISAALLTGSVLAQTVV-TVNGTKIDSSELDARAKFVQQQSQGKVQDTPELRQYIAN 64 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 E+++ET+ QE ++ + S + + D Sbjct: 65 EVVLETVVTQEAKRLQLDKSSEYKTVEADALKQAREKGLDK---------QPDFKGNWAR 115 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + DV D K + ++ +K+ ++ Sbjct: 116 FQNQLLMDVYAQDVAKKNPVSDADVQKRYDDIKSRYHNTDEVQLGEIVTDKEDQAKAAIR 175 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 + K + + ++ +++ + L + F+ + + T Sbjct: 176 ELGAKKSFADVAKKYSIDPAVKAGQPALNEYT--SLVDLKDGR-PKIFEAVQNLKKGEYT 232 Query: 259 -NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 N + DKR + + ++ V KL A I Sbjct: 233 RNAVKGEGIFVVFYANDKRKITV--PAFDQIRDNVRDELQQERVQAAVGKLMQQAKI 287 >gi|298372477|ref|ZP_06982467.1| ppic-type ppiase domain-containing protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275381|gb|EFI16932.1| ppic-type ppiase domain-containing protein [Bacteroidetes oral taxon 274 str. F0058] Length = 650 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 30/298 (10%), Positives = 75/298 (25%), Gaps = 45/298 (15%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 I+ V ++S A S I T+ +T D + + I Sbjct: 5 ILALTVIVISLVMNAQDSNILMTLGKNKVTKDDFEYLFLKNRTNVKTKP-------QTID 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E L+ + + + + Sbjct: 58 EYLQTYKKFRLKVIDAEALGYDTLGSFRKEL----------------------------- 88 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + E ++ +N+ +L + ++ V ++ Sbjct: 89 --DSYRNQMAIGYLTDKDKEKALIEEAYRNMQQDVEASHILLLLPQNATPEDTAKVYQKA 146 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH-PQFQNLLKKSQNNTTNPY 261 + + + + + G ++ + P + L ++P Sbjct: 147 LNIIKRLKKENFRTVATAESDDVGTKDNGGYLGWITGQMMVYPVEKELYSLPIGKISSPI 206 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA------EYVKKLRSNAI 313 T G I + ++R G++ + L E+ KL++ A Sbjct: 207 RTGYGYHIIKVTNRRQAVGKVKVAHILKQFPENATKEQRAKLKSEIYAIYDKLKNGAD 264 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 15/170 (8%), Positives = 51/170 (30%), Gaps = 4/170 (2%) Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + + + + + + ++ I + Sbjct: 201 KISSPIRTGYGYHIIKVTNRRQAVGKVKVAHILKQFPENATKEQRAKLKSEIYAIYDKLK 260 Query: 211 RLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGV 267 + ++ + + S G + F+N K++ + ++P T G Sbjct: 261 NGADFASMAKENSDDEMSANSGGVLNEFGVGRMVEVFENTAFGLKNKGDISSPIETPYGW 320 Query: 268 EYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIHY 316 I + D++ + +K+ + + + + +V KL++ + Sbjct: 321 HIIQLIDRKPVDSFEKMKSDIITHFGFDGRYDACKKSFVDKLKNEYDYKF 370 >gi|297568758|ref|YP_003690102.1| hypothetical protein DaAHT2_0779 [Desulfurivibrio alkaliphilus AHT2] gi|296924673|gb|ADH85483.1| hypothetical protein DaAHT2_0779 [Desulfurivibrio alkaliphilus AHT2] Length = 296 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 32/289 (11%), Positives = 74/289 (25%), Gaps = 45/289 (15%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94 + A T++G IT D+ + L + + + + Sbjct: 28 AAADEGMTVATVDGARITMADVRNEMEL-----RPEATRE-----------FFRAHDGAA 71 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 DS Q AR GL E A + +++ + Sbjct: 72 RFVDSLVTKEVLYQEARRRGLDQE----------PQLRRVIDDYARTLLVNTLIEQELAP 121 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 K E ++ + + +R + + + L Sbjct: 122 KVQFGEEDLQEYYRNNPEEFMTREKVRLSRIVVG---------SAEEAQQVRARLLADED 172 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS--QNNTTNPYV-TQKGVEYIA 271 + + + + G ++ L + +L + ++P + I Sbjct: 173 FAAVAQDLSLEQETAAGGDLGFVERDALSEREAHLAFNVLGLGDISSPQELAENRFVVIK 232 Query: 272 ICDKRDLGGEIALKAYLSAQNTPTK----IEKHEAEYVKKLRSNAIIHY 316 + D L GE + + ++V L+ + I + Sbjct: 233 LTD---LQGETVPYEEIKNLLAQRMETFGRKAAFEDFVATLKQDRKIEF 278 >gi|115360188|ref|YP_777326.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria AMMD] gi|115285476|gb|ABI90992.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria AMMD] Length = 245 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 66/283 (23%), Gaps = 55/283 (19%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 +NG IT + + + L K L +LI L +Q K V Sbjct: 4 VNGVPITQAQVDEAVRLSKAPDTPA-LRAALKNQLIARELFRQAALKQHYDTKPQVVAAV 62 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 A D + + ++ A Sbjct: 63 EQAKA-------------------------------LAMTQAYLRDQVKPVPVTDADVKA 91 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + +V+ + + + +F+ Sbjct: 92 RYDAIVATLGENEYKPSVIAVNDADTAK----------QIIARLRKGEDFGALAREFSKG 141 Query: 226 IHDVSIGKAQYL----------LESDLHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICD 274 G ++ ++ + L+K Q T P + D Sbjct: 142 PSAAQSGALNWISFKTPIEAGHTQNWPQQLAEALVKLPQGGLTREPVQIGDMYWIVRADD 201 Query: 275 KR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 KR + K L Q +EK A+ V L NA I Sbjct: 202 KRQTQVPTFDQAKDTLRQQLEQVAVEKATAQVVADLIRNARIQ 244 >gi|289811437|ref|ZP_06542066.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 408 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 18/161 (11%), Positives = 49/161 (30%), Gaps = 12/161 (7%) Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + + +I A + + + IR + ++ + Sbjct: 29 QAPVSDADIQAYYDQHVDQFTQPERIRYSIIQTKTEDDAKAV---------LDALNKGED 79 Query: 215 DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273 ++ ++ I + G +L ES P+ +N K + + + G + Sbjct: 80 FATLAKEKSTDIISARNGGDMGWLEESATVPELKNAGLKEKGQISGVIKSSVGFLVARLD 139 Query: 274 DKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 D + + ++ ++A+ K +K+ A Sbjct: 140 DIQPAKVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAA 180 >gi|320450789|ref|YP_004202885.1| peptidyl-prolyl cis-trans isomerase [Thermus scotoductus SA-01] gi|320150959|gb|ADW22337.1| peptidyl-prolyl cis-trans isomerase [Thermus scotoductus SA-01] Length = 307 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 28/285 (9%), Positives = 61/285 (21%), Gaps = 27/285 (9%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQKING---ELEKIAVQELIVETLKKQEIEKS 93 A + + E IT R L + + L E Sbjct: 20 AQEDPVVAQVGPEHITKSQFELRFGLFAKSALRQLGLPDSEETRALLAQYRAPYLEALAE 79 Query: 94 GITFDSNTVNYFFVQHAR----------NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 F E L+ G+ D + L +++ Sbjct: 80 ERALLLLARRQGFWPLPDSVEAQVAELVKAFPEEEALRKALEGAGVPDLATYRTLLAEAM 139 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + ++ + + + A + + K Sbjct: 140 ALEALEAHYRTELKVSPAALKALWLLSPEYRHPALYCARHILVP----------TLEAAK 189 Query: 204 DAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPY 261 + + + + + G E P F+ L + P Sbjct: 190 EVLARLAKGEAFAQVAREVSQDPGSKEAGGDLGCEPEGTYIPAFEKALLALKPGEVSPPV 249 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 T+ G I + R + ++ + +K V+ Sbjct: 250 GTEFGFHVILLE--RLVPPGRYPLEEVAEELAQGVKDKAWERLVR 292 >gi|296134820|ref|YP_003642062.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomonas intermedia K12] gi|295794942|gb|ADG29732.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomonas intermedia K12] Length = 282 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 33/288 (11%), Positives = 78/288 (27%), Gaps = 46/288 (15%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 + + S A +++ ++G IT + Sbjct: 19 LTLSLALSCAAQAQVVLRVDGHPITLEE-------------------------------- 46 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + D V V+ L A+ S + ++ L Q++ Sbjct: 47 -AEAVNPQAADQPQVRQQVVEQLVQQQLLADALKSVPPQAQARIEAGQKNLRRQALAQLS 105 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + E A ++ + ++ R+Y +R ++ P ++ + + Sbjct: 106 AEAFLQAHPISQEAIRQAYEKHIADLPTRQYWLRWIVVKTP----------EEAKRVLDA 155 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ-FQNLLKKSQNNTTNPYVTQKG 266 R + + G + E + + + K P + Sbjct: 156 LRGGKQTFTALALHHSIGQNAELGGALGWQSEQAMSAEVLGVVRKLQPGQVAGPIALGEN 215 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + I + +R L Q + +V++L NA I Sbjct: 216 LAIIQLVAERTPP--KPDFEQLKPQIEQQLRQAALQAHVQELAKNAKI 261 >gi|83745590|ref|ZP_00942648.1| Hypothetical Protein RRSL_04650 [Ralstonia solanacearum UW551] gi|207738877|ref|YP_002257270.1| ppic-type peptidyl-prolyl cis-trans isomerase protein [Ralstonia solanacearum IPO1609] gi|83727667|gb|EAP74787.1| Hypothetical Protein RRSL_04650 [Ralstonia solanacearum UW551] gi|206592248|emb|CAQ59154.1| ppic-type peptidyl-prolyl cis-trans isomerase protein [Ralstonia solanacearum IPO1609] Length = 278 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 33/293 (11%), Positives = 78/293 (26%), Gaps = 54/293 (18%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94 + A+ + +NG +T + + IA Q ++ + Q+LI L +Q+ K+ Sbjct: 25 ADALPPGVIALVNGTQVTQAQLDRAIAQSGAQANP-QIAQALKQQLIARELFRQQAAKNP 83 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 V Q I +K++ Sbjct: 84 AYEKLPAVKQAM-----------------------------QEAHDAVITQAWLKDNIKP 114 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 E + ++ +EY R + Q +++ Sbjct: 115 APVTDEQVKARYDAIVASLGDKEYKARVIQLGDDVTAAQVLELLKQ-----------GGD 163 Query: 215 DCNKLEKFASKIHDVSIGKAQYL---------LESDLHPQFQNLLKKSQNNT--TNPYVT 263 +++++ + V G ++ +L + T P Sbjct: 164 FAKLAQQYSTAPNKVRGGDMDWVSFKVPAEEGKTQNLPLPLAREIAALGIGATSTAPVEV 223 Query: 264 QKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + R + +K + ++E+ + V L A + Sbjct: 224 GSQRYIVKVEAARPTQVPAYDTVKPAIRQALESAELERVTVQVVGGLLKQAKV 276 >gi|224536048|ref|ZP_03676587.1| hypothetical protein BACCELL_00912 [Bacteroides cellulosilyticus DSM 14838] gi|224522331|gb|EEF91436.1| hypothetical protein BACCELL_00912 [Bacteroides cellulosilyticus DSM 14838] Length = 513 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 25/301 (8%), Positives = 77/301 (25%), Gaps = 44/301 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 ++ + +I+ C+ +V +A + ING+ I + +E+ Sbjct: 1 MIRSGLTIILLCLGLVV----FAQQDPVLMRINGKEILRSEFEYIYN---KNNALAGIEQ 53 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + E + + N L + Sbjct: 54 KTLSEYVDLFV--------------------------NFKLKVAAAEAAGLDTTRAFREE 87 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + Q + + + I V Sbjct: 88 LEGYRRQLAKAYLTDESVSELAARQVYDKMKANNRAGQIRVSHIFKFLPQTVTSHVLRSA 147 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + + + + + ++ + +F++++ Sbjct: 148 EARMDSLYAALQNGQADFDECVRNFSDEKKSF---------WVSWLQMPVEFEDVVFALK 198 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNA 312 Q + P+ T +G+ + +++++ +K + Q+ +++ V+KL+ Sbjct: 199 QGEISRPFFTPQGIHIVKAIERKEILPFEKVKDEIMRRQSRRYGMDRGTEALVEKLKKEY 258 Query: 313 I 313 Sbjct: 259 Q 259 >gi|219852695|ref|YP_002467127.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methanosphaerula palustris E1-9c] gi|219546954|gb|ACL17404.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methanosphaerula palustris E1-9c] Length = 93 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 31/81 (38%), Gaps = 1/81 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 + + +D ++ +K++ G+ + + + P+F+ + + + Sbjct: 13 KTKDQAEDLKKQISAGGNFGELAKKYSECPSGKKGGELGWFGKGMMVPEFEKVAFEGKEG 72 Query: 256 NTTNPYVTQKGVEYIAICDKR 276 + P TQ G I I ++ Sbjct: 73 DVVGPVKTQFGFHLIKILGQK 93 >gi|217977671|ref|YP_002361818.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylocella silvestris BL2] gi|217503047|gb|ACK50456.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylocella silvestris BL2] Length = 263 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 25/281 (8%), Positives = 73/281 (25%), Gaps = 37/281 (13%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 T+N I I++ + + + E+ A +I E L ++ Sbjct: 3 IVTVNDMAIPAAAIAREAQNHEAESPDAAWEQAARALIIRELLLQRA------------- 49 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + + +++ +++ + + + Sbjct: 50 ------------------RALDLAAEPLVLDGAREADEEAMIRVLLEREVRTPTADESVC 91 Query: 163 IPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + D+ +++ + R + + Sbjct: 92 RRYYDNHRARFQTPDLFEPAHILFKVRRDDAAAYARAIERAEAVLAKLAERPDRFGDFAR 151 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT--NPYVTQKGVEYIAICDKRDL 278 + G+ + D +F+ L + P + GV + + K Sbjct: 152 NLSDCPSGKEGGRLGQVALGDTTSEFETCLLAMEGGQICPTPVRARYGVHVLRLERKAPG 211 Query: 279 G--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 A++ ++A + + A+Y+ L A + + Sbjct: 212 QTLPFEAVRDRIAAYLEESSWRRAVAQYIALLAGQARVIGF 252 >gi|77918655|ref|YP_356470.1| peptidyl-prolyl cis-trans isomerase [Pelobacter carbinolicus DSM 2380] gi|77544738|gb|ABA88300.1| peptidyl-prolyl cis-trans isomerase [Pelobacter carbinolicus DSM 2380] Length = 649 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 25/259 (9%), Positives = 62/259 (23%), Gaps = 12/259 (4%) Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 T + + L E K + + E D V ++ Sbjct: 150 TSRAFERNMREQLLLGKVVEAIKQ--DAEVTDQDIDHEYRNRNEKIDLAFVKLAPGRYES 207 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 ++ E ++ + I + ++ + I K K Sbjct: 208 KVTVTDEALQAYFQENREDFRQP---EKIALRFVRFDPDNVAKDISVDDAAIQDYYDKHK 264 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRI---KDAEESRLRLPKDCNKLEKFASKI-H 227 + E ++ ++ QK+ + E + Sbjct: 265 DQYWVEEQVKASHILFRITAGLDEDGRQKKRAAAQKVLEQARAGKDFAQLARTHSDDAGS 324 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE--IAL 284 + G Y + P F+N+ ++ T G I + + + + Sbjct: 325 AIKGGALGYFTHGSMVPDFENVAFALKPGQISDLVETSMGYHIIKCEGRIEAQTKPLDDV 384 Query: 285 KAYLSAQNTPTKIEKHEAE 303 + + A + + Sbjct: 385 RDDVRANLRKELARQDALD 403 >gi|32265604|ref|NP_859636.1| hypothetical protein HH0105 [Helicobacter hepaticus ATCC 51449] gi|32261652|gb|AAP76702.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 276 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 34/299 (11%), Positives = 81/299 (27%), Gaps = 36/299 (12%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELI 81 + S ++ ++ T++G ITD D + + I K++ + +++ + ELI Sbjct: 5 LLATILFSLVCVSLQAKTYATVDGVAITDKDMEILKQSIPNFNYNKLSEQEKEMLINELI 64 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 L + ++ + N + Q N + Q Sbjct: 65 NRQLILKAAKQEKLDTSKEYT-DTINSIKDNLLIDLWTKKQANSTQVPTMNDAQLRKIYQ 123 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + + + + + + + Sbjct: 124 ENEGEFIDQE----------------------------GKARHILVKSESEAKEIIKELD 155 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT--N 259 ++ + + N + + G + + P F + T Sbjct: 156 KVGKAKAEAKFIELANAKSIDPASKQQKNGGDLGVFKRAGMDPMFSKAAFDLKPGTYTKE 215 Query: 260 PYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 P +TQ G I + K + K + I+ + ++ LR+ A I Sbjct: 216 PVLTQFGYHIIYLERKSEPKVIPYKDAKKIIENSIKMQSIQGGMMQKIQALRAKAKIKI 274 >gi|241668931|ref|ZP_04756509.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877463|ref|ZP_05250173.1| peptidyl-prolyl cis-trans isomerase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843484|gb|EET21898.1| peptidyl-prolyl cis-trans isomerase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 470 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 110/291 (37%), Gaps = 21/291 (7%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKING-------ELEKIAVQELIVETLKKQEIEK 92 ++ +N + IT ++ + +A + N ++ + A+Q+LI +++ Q E+ Sbjct: 53 NKTVAIVNSKPITSFELDQEVAKFEAMNPNSSFHSDSLQIRREALQDLIAQSVLLQLAER 112 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 + I + ++ A G+S E ++ G+ +K+ + Q + + + Sbjct: 113 NNIIISNQQLDAAIKDIAAKNGVSVESLKLNVEASGMSFESYKKRIREQLMVSQLQQQAI 172 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 + EI +K + ++ Y ++ ++ ++PD+K Q + K A Sbjct: 173 SQQVYVSPEEIQKYIKKHQEQFDREMAPIKLYTLKNLIVALPDSKKARQKKIDLFKKLAI 232 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQ-YLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 +++F+ + G + + +++ +K ++ + P++ Sbjct: 233 AVNKGYIDFSEVVKQFSQAPNATYGGIVSQQVKFDSIPSMYRDYVKDLKEHQVSEPFIVN 292 Query: 265 KGVEYIAICDKRDLGGEIALKAY------LSAQNTPTKIEKHEAEYVKKLR 309 ++ I I + + ++ K + + E+ + + R Sbjct: 293 HTLQMIYIDNIDEKAPMLSKKVTKYYVYAIEIKLDGGMTEEGAKSSLDRAR 343 Score = 43.9 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 27/271 (9%), Positives = 73/271 (26%), Gaps = 9/271 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + +A +KL L K +K I + +++ V + Sbjct: 191 QEQFDREMAPIKL-YTLKNLIVALPDSKKARQKKIDLFKKLAIAVNKGYIDFSEVVKQFS 249 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 +A + ++ + V F++ + + I +K Sbjct: 250 QAPNATYGGIVSQQVKFDSIPSMYRDYVKDLKEHQVSEPFIVNHTLQMIYIDNIDEKAPM 309 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ + I + + + + A + K+ + G Sbjct: 310 LSKKVTKYYVYAIEIKLDGGMTEEGAKSSLDRARLAIESGQDFTKVALKYNQDYDHAN-G 368 Query: 233 KAQYLLE-----SDLHPQFQNLLKKSQNNTTNPYVT-QKGVEYIAICDKRDLGGEIALKA 286 K +++ + F L + + P+ K + ++ LK Sbjct: 369 KFRWVSRLDSPPAIPPAAFAKLETMKEGEVSEPFQADPKTWMIMKYTKVKEHDAAEELKE 428 Query: 287 Y-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ ++ ++ +A I Sbjct: 429 QKALEAIFSEKAQEVYKTWLTSMKDDAYIEI 459 >gi|315453564|ref|YP_004073834.1| major antigenic peptide PEB3\Peptidyl-prolylcis-transisomerase C [Helicobacter felis ATCC 49179] gi|315132616|emb|CBY83244.1| major antigenic peptide PEB3\Peptidyl-prolylcis-transisomerase C [Helicobacter felis ATCC 49179] Length = 291 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 36/318 (11%), Positives = 89/318 (27%), Gaps = 42/318 (13%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIAL 62 S + L + VL + + S + IT+ D +R Sbjct: 1 MVKKSVILAGLLGFGVLGATTLATVTFTGKKGGKSEVV------NITESDFDVLKQRNPN 54 Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 + + + + + + I L ++E +K N S E S+ Sbjct: 55 FNFNNLQDKQKMVLLDQAISNLLIEREAKK------------------ENLEDSPEFKSN 96 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + + I + + E ++ K+ V++ + Sbjct: 97 LASYKKQLLVEVWVKHRAEIIGKEQI----------PEDQLKQYYDTNKDRFVQQEA-QA 145 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + + + + K N+ + + + G +S + Sbjct: 146 RHILVKTEADARRIISELNKVPKTKVEHEFIKIANRDSIDPNTKNTKNGGDLGKFQKSQM 205 Query: 243 HPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIE 298 P+F + + + T P T+ G + + K K + + + Sbjct: 206 TPEFSKAVFELRPGTYTKTPVKTEFGYHVVYLMHKSQPVTPTFAQAKQSIIGILKEQQFQ 265 Query: 299 KHEAEYVKKLRSNAIIHY 316 ++ ++KLR ++ Sbjct: 266 EYVKGELEKLRKQVVVDI 283 >gi|160902886|ref|YP_001568467.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Petrotoga mobilis SJ95] gi|160360530|gb|ABX32144.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Petrotoga mobilis SJ95] Length = 558 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 96/313 (30%), Gaps = 32/313 (10%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG---DISKRI--------A 61 +K L F +++ V I S ++S+ +GE I + ++ + + Sbjct: 1 MKKLLVVFGILVILSVSIFSESVAYLTSQ-----DGEQIHESYFLELDQLMGEYHNTLLN 55 Query: 62 LLKLQKINGELEKIAVQE------LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 +L + + L+ ++ + +GIT D+ ++ Q + Sbjct: 56 MLSQNPQYDQYFNKPLDLISITDVLMEYKAMEKFLNDNGITLDATKISQETDQMYSQY-M 114 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 E + +F+ +++ +V+ E+E+ Sbjct: 115 GNESTKQIFLMFFEKEEYFRGFVSSLVYRNEVINELRNYFSNFSEVELSTYVSDNLENFK 174 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 E+ + + ++ + + + + G Sbjct: 175 NEFDTVKISRIVTVDESTANNLKSEI------LQNNISFTDAASKNSVDAQTASVGGLVG 228 Query: 236 YLLESDLHP-QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQN 292 ++ D+ F+ L + P + G E + + DK+ + E+ + +Q Sbjct: 229 WVKRGDISENIFEASLSSTPGEIIGPLSSPLGYEIVRVEDKKIYETADELLADEDIKSQL 288 Query: 293 TPTKIEKHEAEYV 305 T + ++ + Sbjct: 289 TASYVDYQINNWY 301 >gi|332290245|ref|YP_004421097.1| peptidyl-prolyl cis-trans isomerase [Gallibacterium anatis UMN179] gi|330433141|gb|AEC18200.1| peptidyl-prolyl cis-trans isomerase [Gallibacterium anatis UMN179] Length = 621 Score = 66.2 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 42/388 (10%), Positives = 92/388 (23%), Gaps = 88/388 (22%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56 M K+ + + + I F + + Y + + T+NG I+ Sbjct: 1 MMEKLRGYTHSMVWKVLMSVIAISFVLSGVAGYL-ISRQNTSAATVNGVEISQRLFQQQY 59 Query: 57 ------------SKRIALLKLQKINGELEKIAVQELIVETLKKQEI-------------- 90 K A+ + L + LI + L +Q Sbjct: 60 QSQYQQLAMQMGDKFAAVADSAEFTNGLRHSVLDRLIDDELLRQYSKELGLGVGDEAIKQ 119 Query: 91 ---EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 D N + Q N L+ + ++ + + + LA + Sbjct: 120 AIVMNPAFQKDGQFDNAVYQQLLANNNLTPDQYAEIVRQDLVLSQLMGSLLASDFLTEAQ 179 Query: 148 VKNDFM-------------------LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + K + EI K L++ + Sbjct: 180 QQQFVKLFFQKRSVRLATFPVADLAAKQTISDQEIEKYYNDHKAAFATPELVKVQYIDVN 239 Query: 189 DNKLQNQGFV-------------------------------QKRIKDAEESRLRLPKDCN 217 +KL V Q D + Sbjct: 240 KDKLAKDLQVSDVEVAQYYQDNKSQFMGQAKQHIAHIQVNTQAEADDIYNKLQQGADFAE 299 Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIAICDK 275 +K++ + V+ G +++ L F+ + + P I + + Sbjct: 300 LAKKYSIDRLTAVNGGDLSWVVAGQLPKAFEAAADNTAVGAYSKPTKVDDKYHIIKVLAR 359 Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHE 301 + +K+ ++ E+ Sbjct: 360 NEATVLPLEEVKSRITDLVRQDLAERKY 387 >gi|89095401|ref|ZP_01168315.1| peptidyl-prolyl cis-trans isomerase C [Oceanospirillum sp. MED92] gi|89080339|gb|EAR59597.1| peptidyl-prolyl cis-trans isomerase C [Oceanospirillum sp. MED92] Length = 93 Score = 66.2 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 23/82 (28%), Gaps = 1/82 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +++ + ++ +S G + P+F + + Sbjct: 12 DTEEQCNQIKAEIEAGLDFAEAAKQHSSCPSSAQGGDLGSFGRGQMVPEFDKAVFTGEVG 71 Query: 256 NTTNPYVTQKGVEYIAICDKRD 277 P TQ G + + + D Sbjct: 72 VVQGPIQTQFGFHLLEVTSRED 93 >gi|330823101|ref|YP_004386404.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus denitrificans K601] gi|329308473|gb|AEB82888.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus denitrificans K601] Length = 275 Score = 66.2 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 14/167 (8%), Positives = 48/167 (28%), Gaps = 8/167 (4%) Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL----RL 212 E + +R + +++R + Sbjct: 96 EPSEEACRRYHAAHPTLHGEGERLRLRHVLFAVTPGVDVKQLRQRAESVLLDLRCDDDGG 155 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKGVEYI 270 + ++++ G+ +L ++D P+F + + ++ G+ + Sbjct: 156 VRFAEAARQWSNCPSGQQGGELGWLTQADCAPEFAREIFGKAEVGVLSRLVHSRFGLHVV 215 Query: 271 AICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 +C++ ++A ++ +Y++ L A + Sbjct: 216 EVCEREAGRALAFEEVQASVALLLRQQAWINALRQYLQLLAGAAEVE 262 >gi|237756622|ref|ZP_04585137.1| SurA N- domain family [Sulfurihydrogenibium yellowstonense SS-5] gi|237691220|gb|EEP60313.1| SurA N- domain family [Sulfurihydrogenibium yellowstonense SS-5] Length = 290 Score = 66.2 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 104/308 (33%), Gaps = 31/308 (10%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMS----SRIRTTINGEVITDGDISKRIALLKLQKIN 69 +L + +L+ + + ++ +NGE + D+ ++ Sbjct: 5 SILNVFLMLLTVLLFTFNNKAKAEDGYRLFDKVVLVVNGEPVLKSDLEFAKNWYNIKDD- 63 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSFLDKQG 128 K A +++I L Q+ + GI+ ++ + A+ G E F L+ G Sbjct: 64 ----KEAEEKIINSFLLAQQARRMGISVSPREIDNAVLNIAKANGIDDLETFKKKLEDSG 119 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 I + K++LA + ++ K +E + ++TV Sbjct: 120 ISYSKLKEFLARDMLANRLLHLYMREKASKGIIE------------GDKEDVKTVRLIFI 167 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQ 247 + V + + L K++ + G + + DL + Sbjct: 168 SKNRPDYQEVLSK----LDKELNKNNFSEFASKYSDDKFTAENKGLIGEIKKGDLVKELD 223 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + T +G+ +I I ++ KA +S + K++K ++K Sbjct: 224 EAIFSHKAGDIFKVETNEGMYFIYIE---KEENKLTPKAEMSEK-EVEKLKKEYDLLLRK 279 Query: 308 LRSNAIIH 315 L+ A+I Sbjct: 280 LKERAVIQ 287 >gi|254369748|ref|ZP_04985758.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. holarctica FSC022] gi|157122707|gb|EDO66836.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. holarctica FSC022] Length = 469 Score = 66.2 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 109/273 (39%), Gaps = 15/273 (5%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-------ELEKIAVQEL 80 V + + ++ +N IT ++ + +A L+ + N +L++ A+Q+L Sbjct: 40 VSMNVSDKKYLVNKTVAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKLKRQALQDL 99 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I +++ Q E++ I + ++ A G+S E ++ G+ + +K+ + Sbjct: 100 ISQSVLLQLAERNNIMISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIID 159 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV------REYLIRTVLFSIPDNKLQN 194 Q + + + + EI +K + + Y ++ ++ ++PD+K Sbjct: 160 QLMISQLQQQAIAQQVYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKAR 219 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKK 252 Q + K A +++F+ + VS G ++ D P + + + Sbjct: 220 QKKIDLFKKLALAVNNGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKEL 279 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 + + P++ ++ I I + + ++ K Sbjct: 280 KNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKK 312 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 26/271 (9%), Positives = 78/271 (28%), Gaps = 9/271 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + ++ +KL + + + + + + + + + V+ Sbjct: 190 QKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVNNGSIDFSEIVKQFSQ 249 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + V F++ + + I +K Sbjct: 250 APNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQ-VSQPFIVNHTLQMIYIDNIDEKAPI 308 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ + I + N+ + ++ A+ + + K+ + G Sbjct: 309 LSKKVTKYYVYAIEIKLDGGMNEDGAKSSLERAKLAIESGQEFTKVALKYNQDYDHPN-G 367 Query: 233 KAQYLLESDLHP-----QFQNLLKKSQNNTTNPYVTQK-GVEYIAICDKRDLGGEIALKA 286 +++ E D P F L + +N + P+ I ++ LK Sbjct: 368 NFRWVSELDSPPSLPPAAFAQLKQLKENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKE 427 Query: 287 Y-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K +K ++ ++ +A I Sbjct: 428 QKALEAIFSEKAQKIYKTWLTSMKDDAYIEI 458 >gi|161522420|ref|YP_001585349.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans ATCC 17616] gi|189348704|ref|YP_001941900.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia multivorans ATCC 17616] gi|160345973|gb|ABX19057.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans ATCC 17616] gi|189338842|dbj|BAG47910.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia multivorans ATCC 17616] Length = 262 Score = 66.2 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 51/172 (29%), Gaps = 7/172 (4%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + + R ++ +++R + A Sbjct: 79 RELTHVPEPDRADCERYYAQHPARFRRNDIVYASHVLFAVTDRVPLAPLRQRAERALADV 138 Query: 210 LRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKG 266 + P + ++ G +L D P+F+ L + T+ G Sbjct: 139 VAAPDTFDAVARASSNCPSAQVGGSLGQVLRGDTVPEFEAALFDTDGLGVLPKLVNTRFG 198 Query: 267 VEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + I D+R D A+ A ++A T ++ +YV L A I Sbjct: 199 FHIVRI-DRRVAGDTVPFDAVAAQIAAHLTARVRQRAMRQYVAILAGGARIE 249 >gi|303249065|ref|ZP_07335308.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio fructosovorans JJ] gi|302489530|gb|EFL49472.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio fructosovorans JJ] Length = 654 Score = 66.2 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 20/232 (8%), Positives = 55/232 (23%), Gaps = 9/232 (3%) Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 + + Y + + F I+ + + Sbjct: 176 ARSIFDFMREQAVIKYIMFKAEDFDKGITPTDEQIKAYYEARKDQFATPAKIKIDYVEFT 235 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + +I A + + R ++ F I + V ++ Sbjct: 236 PKALAQPDKVTDADIEAYYKANQKKYARPEQVKVRHFLIMLPADAPKSAVDAATAKLKDI 295 Query: 209 RLRLPKDCNKLEKFASKIHDVSI---GKAQYLLESDLHPQF----QNLLKKSQNNTTNPY 261 +L ++ +L + L +F + + P Sbjct: 296 AAKLKAGAAFASLLPKNPNNADGLIGEDWAWLPKGSLPKEFGPFEEKAFSLKNGEISEPV 355 Query: 262 VTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 T G+ I +++ G +K + + K + + ++ Sbjct: 356 RTALGLHLIQAGERQAAGERPLSEVKDDIREELAERKASDKLTQSLDNMQDK 407 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 18/234 (7%), Positives = 66/234 (28%), Gaps = 15/234 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + ++++F + S++ + TI+G+ + D K Sbjct: 1 MLDPMRKYAQSWGIKIVFGLIILVFVFWGVGSFRGDKA--TVLATIDGQPVLIKDYEKAY 58 Query: 61 ALLKLQKINGE------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + N ++ L +++ +K G++ ++ + + Sbjct: 59 REAQRLVKNKNPDITDKELQDGGFRWQVFSNMVTSRLLEEQAKKLGVSVSADELRAEIAK 118 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 S + + + ++ +++ A + Sbjct: 119 IPAFQDKSKKFDAKRYENLLRANDVTPGEFEADFRQNLLLE-KLAGFVSLPASVSEAEAR 177 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + +I+ ++F D ++ E + + + Sbjct: 178 SIFDFMREQAVIKYIMFKAEDFDKGITPTDEQIKAYYEARKDQFATPAKIKIDY 231 >gi|148359402|ref|YP_001250609.1| hypothetical protein LPC_1300 [Legionella pneumophila str. Corby] gi|148281175|gb|ABQ55263.1| hypothetical protein LPC_1300 [Legionella pneumophila str. Corby] Length = 624 Score = 66.2 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 21/197 (10%), Positives = 56/197 (28%), Gaps = 7/197 (3%) Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 F + + + +D + EI + ++ K+ + Sbjct: 203 SEDDIKSYYNQHHKKFMTSEQVTLDYVLLTMHDIKSQIKISPDEIKSYYEENKSNYLTPA 262 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-----SIGK 233 R + + + A+E L K + +K+ + D + G Sbjct: 263 QWRVAHILFAVPENATKEEQDSIKQKADEVYSDLKKHPEQFDKYVASKSDDKLSIANKGI 322 Query: 234 AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQ 291 ++ + P T+ G E + + + + ++ + Q Sbjct: 323 LPWITGGQNEYGRVLSNLTRPGEISTPVQTKYGYEIFKLIAYKPVTTKSLQEVENIIKDQ 382 Query: 292 NTPTKIEKHEAEYVKKL 308 T + A+ +++L Sbjct: 383 LTSDMAQAKYAQVLEQL 399 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 25/218 (11%), Positives = 57/218 (26%), Gaps = 8/218 (3%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + + L + I F + + Y S + +N + IT Sbjct: 1 MLQKLNEHIQGVVAWLVIILIAITFTLFGVDYYFQSLQISDAKVIVNDKPITMQAFETNY 60 Query: 61 ALLKLQK--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + Q+ L+ + ++I + Q K G N VQ + Sbjct: 61 RRTRAQQDLPQMTAADEKNLQNQVLNQMITNEVSIQAARKYGFEVSPEQANAAIVQIPQF 120 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + + F + + + Sbjct: 121 QEDGHFSAQRYQQALSGALFTPETFQNEVRQGMLLNQQRFAFMGTSFALSDEIKRFVRLY 180 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + R+Y TV + + + K + + Sbjct: 181 MQTRDYDYLTVPSDRFEQQAKISEDDIKSYYNQHHKKF 218 >gi|296107448|ref|YP_003619148.1| peptidyl-prolyl cis-trans isomerase D [Legionella pneumophila 2300/99 Alcoy] gi|295649349|gb|ADG25196.1| peptidyl-prolyl cis-trans isomerase D [Legionella pneumophila 2300/99 Alcoy] Length = 624 Score = 66.2 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 21/197 (10%), Positives = 56/197 (28%), Gaps = 7/197 (3%) Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 F + + + +D + EI + ++ K+ + Sbjct: 203 SEDDIKSYYNQHHKKFMTSEQVTLDYVLLTMHDIKSQIKISPDEIKSYYEENKSNYLTPA 262 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-----SIGK 233 R + + + A+E L K + +K+ + D + G Sbjct: 263 QWRVAHILFAVPENATKEEQDSIKQKADEVYSDLKKHPEQFDKYVASKSDDKLSIANKGI 322 Query: 234 AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQ 291 ++ + P T+ G E + + + + ++ + Q Sbjct: 323 LPWITGGQNEYGRVLSNLTRPGEISTPVQTKYGYEIFKLIAYKPVTTKSLQEVENIIKDQ 382 Query: 292 NTPTKIEKHEAEYVKKL 308 T + A+ +++L Sbjct: 383 LTSDMAQAKYAQVLEQL 399 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 25/218 (11%), Positives = 57/218 (26%), Gaps = 8/218 (3%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + + L + I F + + Y S + +N + IT Sbjct: 1 MLQKLNEHIQGVVAWLVIILIAITFTLFGVDYYFQSRQISDAKVIVNDKPITMQAFETNY 60 Query: 61 ALLKLQK--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + Q+ L+ + ++I + Q K G N VQ + Sbjct: 61 RRTRAQQDLPQMTAADEKNLQNQVLNQMITNEVSIQAARKYGFEVSPEQANAAIVQIPQF 120 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + + F + + + Sbjct: 121 QEDGHFSAQRYQQALSGALFTPETFQNEVRQGMLLNQQRFAFMGTSFALSDEIKRFVRLY 180 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + R+Y TV + + + K + + Sbjct: 181 MQTRDYDYLTVPSDRFEQQAKISEDDIKSYYNQHHKKF 218 >gi|206603475|gb|EDZ39955.1| Probable peptidil-prolyl cis-trans isomerase [Leptospirillum sp. Group II '5-way CG'] Length = 289 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 32/287 (11%), Positives = 72/287 (25%), Gaps = 50/287 (17%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKL-QKINGELEKIAVQELIVETLKKQEIEK 92 S + + + I+ D+ K++ + L + + + +++ +L E K Sbjct: 24 SSAPLPDSVLAKVGDTTISQADLKKKLDSMGLASSKDPNVTSELLNQMVDNSLLAMEARK 83 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 G+ + D Sbjct: 84 EGLDKTPEFKKK----------------------------MHAYETKLLRKALLKKDVDD 115 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 +K + ++ NK + +R V+F ++ ++K Sbjct: 116 KVKVTDSDIMNYYNKHQKDIKQPGYVDVRQVVFPDEKTAKRDFSLLKKNGG--------- 166 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIA 271 F G + E + P+F + + T P + G+ Y Sbjct: 167 ---------FKKLTKMFKGGPVGKIYEGTVPPKFVSFFFGVPEGSITGPIPLKDGIHYFK 217 Query: 272 ICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 I K + + + + V LRS + Sbjct: 218 IDRSVKGVQLTLDQARDGIRNYLRNRQNKTIYQTLVNHLRSTTTVQI 264 >gi|86137742|ref|ZP_01056318.1| hypothetical peptidyl-prolyl cis-trans isomerase [Roseobacter sp. MED193] gi|85825334|gb|EAQ45533.1| hypothetical peptidyl-prolyl cis-trans isomerase [Roseobacter sp. MED193] Length = 266 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 21/182 (11%), Positives = 52/182 (28%), Gaps = 8/182 (4%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 +++ +++ + E E+ A + + L + + Sbjct: 77 EEALIRGLLEARVEVDA-PTEEEVRAEWARDPSRFRSPPLWEVSHILCACDPRDKAAKEK 135 Query: 200 KRIKDA---EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQN 255 K + + + + S G L D P+F+ + Sbjct: 136 ALKKANVLNDRLKTNPKDFVALAKTESDCGSKSSGGALGQLGPGDTVPEFERYLHHLKEG 195 Query: 256 NTTN-PYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 T P +++ G + + + A K +S + +V++L + A Sbjct: 196 EITPVPVLSRHGYHIVRMDAVAEGQELPFEAAKRAISMAMEKASWARSAQAFVQELAAGA 255 Query: 313 II 314 I Sbjct: 256 EI 257 >gi|313617659|gb|EFR89948.1| foldase protein PrsA [Listeria innocua FSL S4-378] Length = 291 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 28/304 (9%), Positives = 82/304 (26%), Gaps = 40/304 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L ++ + S + + T + +T ++ + + Sbjct: 1 MKKKLILXXVMMMALFSLAACGGGGNVVKT-DSGDVTQDELYDAMK--------DKYGSE 51 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 VQ+L E + + + S D + + + Sbjct: 52 FVQQLTFEKILGDKYKVSDEDVD------------KKFKEYKSQYGDQFSAVLAQSGLTE 99 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + +V+ + + + + Sbjct: 100 KSFKSQLKYNLLVQKATEANADTSDKALKEYYKT---------------WQPDITVSHIL 144 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--K 252 + + K+ E+ K + +++++ + G+ + P F+ K Sbjct: 145 VADENKAKEVEQKLKDGAKFADLAKEYSTDTATKENGGQLAPFGSGKMDPAFEKAAYALK 204 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKKLRSN 311 ++ + + P TQ G I + K + ++ + +KK + Sbjct: 205 NKGDISAPVKTQYGYHIIQMDKPATKTTFDKDKKAVKESYLASQLTTENMQKTLKKEYKD 264 Query: 312 AIIH 315 A + Sbjct: 265 ANVK 268 >gi|182417449|ref|ZP_02948776.1| peptidil-prolyl cis-trans isomerase [Clostridium butyricum 5521] gi|237665664|ref|ZP_04525652.1| peptidil-prolyl isomerase family protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378618|gb|EDT76145.1| peptidil-prolyl cis-trans isomerase [Clostridium butyricum 5521] gi|237658611|gb|EEP56163.1| peptidil-prolyl isomerase family protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 252 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 28/263 (10%), Positives = 66/263 (25%), Gaps = 46/263 (17%) Query: 40 SRIRTTINGEVITDGDISKRIALL----KLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 + + ING+ IT+ D+ I+ + + + +L+ L + + Sbjct: 3 NNVLAIINGKEITEFDVENIISQYSEADQKSVNTDNGREKILDQLVSCELMYNFAQDEKL 62 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + + + + K Sbjct: 63 EETDEFKVRI------------------------------EEARKDILTQMGI-SKAAGK 91 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 E E K + ++ + ++ E Sbjct: 92 ESINENEALDYYNSNKEKFIIGEMVSVKHILV--------ESQEEAYNVKNEIENNQISF 143 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT-TNPYVTQKGVEYIAICD 274 + K++ +++ G L F+ ++ N T+P T+ G I + D Sbjct: 144 SDAALKYSMCPSNMNGGSLGTFGRGKLTASFEEAAFNAKINILTDPVETEFGFHIILVED 203 Query: 275 KRD--LGGEIALKAYLSAQNTPT 295 RD + +K + Sbjct: 204 FRDEYIKDFDDVKEEIMLHLKKK 226 >gi|154684591|ref|YP_001419752.1| YacD [Bacillus amyloliquefaciens FZB42] gi|154350442|gb|ABS72521.1| YacD [Bacillus amyloliquefaciens FZB42] Length = 296 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 36/318 (11%), Positives = 96/318 (30%), Gaps = 35/318 (11%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 S + ++ V + + ++ S TI + IT D K++ Sbjct: 1 MKSRTLLTIIVAALLVCSVTVAYKLTKSQAAGSSEESIATIGDKHITRQDWMKKM----- 55 Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 + K ++++I + ++ EK+ +T ++ ++ F+ ED Sbjct: 56 ---EDQYGKSTLEDMINAQVVEELAEKNKLTVSNSELDREFLLIKAVDNSFYEDSHITEK 112 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 Q + +++ + E+ + K K + + R Sbjct: 113 -----------EWRDQIRYNILLEELLTKDIDISDKEMQSFYNKNKELYHFDDSYRIRHI 161 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH-- 243 + + ++ + + + E+ + G ++ E+ + Sbjct: 162 VVKNKDEADRVLA--------DLKGGSSFEAVAAERSTDRYTSQYGGDLGFVTENQENIP 213 Query: 244 -PQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEK 299 K ++ + P G I + +K +K+ + Q ++ Sbjct: 214 QAYITEAKKLKEDEWSVEPIKVSSGYAVIQLKEKLKSRTFSYNEVKSQIRRQIAMEQLGD 273 Query: 300 HEAEYVKKLRSNAIIHYY 317 VK L A + ++ Sbjct: 274 KAT--VKTLWKEAGVSWF 289 >gi|307297459|ref|ZP_07577265.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotogales bacterium mesG1.Ag.4.2] gi|306916719|gb|EFN47101.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotogales bacterium mesG1.Ag.4.2] Length = 546 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 22/316 (6%), Positives = 76/316 (24%), Gaps = 32/316 (10%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +K + F + I + + ++ N IT +I + + + Sbjct: 1 MKKFLLILLAAFFSLTLIGAEYAVRITKGGEAVSNEFWITREEIEQAFSATVANAASQGI 60 Query: 72 ----------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 L+ + + ++ E L +S + ++ Sbjct: 61 ILDPYFDSYFTPSELGLKTMIIPYIVDEKLIDYFAWESNLIPSEEEIDAETDSMMEMYTS 120 Query: 116 SAEDFSSFLDKQ--GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 S + + ++ ++V+ + + Sbjct: 121 SPDMVEQIEAIYGSMDAFRSEIRNYVSDALKAELVQESVAPLNDDALAAYFEEFKTEIKN 180 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIG 232 R +L + + + +F+ + G Sbjct: 181 QFETIRARHILVT----------EEATATELMDRINSGEITFAEAALQFSIDSSTAANGG 230 Query: 233 KAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SA 290 + ++ P+F+ + + P ++ G I + ++ ++ + Sbjct: 231 ELGSIVRGQTVPEFEEAILAAPIGELYGPVQSEFGYHLIIVEERNEINSLEDVVNSASYN 290 Query: 291 QNTPTKIEKHEAEYVK 306 +++ Sbjct: 291 DFVSGYQNDTYNRWIE 306 >gi|23394408|gb|AAN31492.1| peptidylprolyl isomerase [Phytophthora infestans] Length = 265 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 12/129 (9%), Positives = 32/129 (24%) Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + ++ ++ + + + E+ K ++ + Sbjct: 15 CCIASVAGQDAAPVAIQAHASHLLVDTEAEADDLSVQLGEASNLFLKFAQLAKEHSKCPS 74 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 G + P+F + + + + TQ G + I + D E Sbjct: 75 SRKGGDLGTFDRGQMVPEFDKVAFEGEIGVVHKVKTQFGWHLVLISRRLDGTEEPDKYRD 134 Query: 288 LSAQNTPTK 296 L Sbjct: 135 LKQALLKIM 143 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 30/88 (34%) Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 ++++ K K+ + + + K K ++ G ++ PQF Sbjct: 171 FHILVKSEDEADKLFKEIDAAEDKKTKLSELAGKHSTCPSGKKGGDLGMFGRGEMVPQFD 230 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDK 275 ++ + + TQ G + ++ Sbjct: 231 KVVFEGEVGELAKVQTQFGWHVLLCTER 258 >gi|145220375|ref|YP_001131084.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Prosthecochloris vibrioformis DSM 265] gi|145206539|gb|ABP37582.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium phaeovibrioides DSM 265] Length = 704 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 14/135 (10%), Positives = 37/135 (27%), Gaps = 11/135 (8%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 +L N + + ++++ G + Sbjct: 353 HILIRFNPNSRADIQKGRALSDMILRELKAGGNFAELARRYSADPGSAARGGDLGWFRSD 412 Query: 241 DLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 + P+F + + P TQ G+ I + + + + + P Sbjct: 413 RMVPEFADAVFASKPGAIVGPVQTQFGLHIIKVAG---FDRKAVVASEIVRTIRP----- 464 Query: 300 HEAEYVKKLRSNAII 314 +E + +R A++ Sbjct: 465 -SSETAEGIRRRAMV 478 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 30/101 (29%), Gaps = 4/101 (3%) Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK- 275 + F++ S G P + + + P Q G + + Sbjct: 602 SSFSMFSASDIRWSDGFIPGYGVDR--PLVEAMAGMPLARLSEPVQIQSGYAVCEVSSRA 659 Query: 276 -RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + KA ++ Q K E+ + Y LR A I Sbjct: 660 LPEGLDIKTEKAGIAPQVLGLKQEQLFSAYFSALRKQAKIE 700 Score = 45.4 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 14/136 (10%), Positives = 44/136 (32%), Gaps = 3/136 (2%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 + + ++ +I + +G ++ + +++ + + +K + Sbjct: 451 KAVVASEIVRTIRPSSETAEGIRRRAMVFQMDAKEKGMDESASADKLPLETTGQFGRHMP 510 Query: 236 YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL---GGEIALKAYLSAQN 292 + S+ + ++ T KG + + K D + LKA ++ + Sbjct: 511 IAAIGYNDKIDDFAFRSSEGDLSDVIETPKGFYVMRLTGKNDSGYRKLDDDLKAGITTEI 570 Query: 293 TPTKIEKHEAEYVKKL 308 K + + L Sbjct: 571 IKEKKGEFIKNRLASL 586 >gi|256545093|ref|ZP_05472459.1| PPIC-type PPIASE domain protein [Anaerococcus vaginalis ATCC 51170] gi|256399134|gb|EEU12745.1| PPIC-type PPIASE domain protein [Anaerococcus vaginalis ATCC 51170] Length = 248 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 32/279 (11%), Positives = 79/279 (28%), Gaps = 49/279 (17%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLK--LQKINGELEKIAVQELIVETLKKQEIEKS 93 ++ I +NG+ I+ ++ I ++ Q +N + EL+ + L + ++ Sbjct: 2 TEKNNDILAEVNGKKISQKEVVSFITQMQGGQQFLNPQGIHQITDELVNQELMYIDALEN 61 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + D + +++ + + Sbjct: 62 KLDEDEEFTKEL-------------------------------EITKENMLKNYAMHKLF 90 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + EI K + + R + D + + Sbjct: 91 ESIEVSDEEIKNYYDNNKEVVKKPKSYRASHILVDDEESAKNILNE---------INDGL 141 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAI 272 + K++ + G + + +F+ L K + + P TQ G I + Sbjct: 142 SFEDAANKYSKD-NGSKNGDLGEFPKGTMVKEFEEALDKLGEGEISKPVKTQFGYHIIKL 200 Query: 273 CDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 D +K + K ++ +Y++K R Sbjct: 201 DHTHDEYLPEFDEIKDRIHDTLLMIKRQE---KYLEKTR 236 >gi|290894110|ref|ZP_06557083.1| rotamase [Listeria monocytogenes FSL J2-071] gi|290556365|gb|EFD89906.1| rotamase [Listeria monocytogenes FSL J2-071] Length = 295 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 28/312 (8%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 +++ K++ + + + S + +T ++ + + Sbjct: 1 MTNLKKVMISVIAATLLLLAGCGSSA--------VVKTDAGSVTQDELYEAMKT------ 46 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 VQ+L + + + + + ++ E + + Sbjct: 47 --TYGNEVVQQLTFKKILEDKYTVTEKEVNAEY------------KKYEEQYGDSFESTL 92 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +N K + +V+ E ++ + + +R +L Sbjct: 93 SSNNLTKTSFKENLEYNLLVQKATEANMNVSESKLKTYYKTW----EPDITVRHIL---- 144 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQ 247 + K+ + K + +++++ + G ++ F+ Sbjct: 145 -------VDDEATAKEIQTKLKNGEKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFE 197 Query: 248 NLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-AQNTPTKIEKHEAEY 304 +++++ + + G I + K + G KA + A ++ Sbjct: 198 KAAYALENKDDVSGIVKSTYGYHLIQLVKKTEKGTYAKEKANVKAAYIESQLTTENMTAA 257 Query: 305 VKKLRSNAIIHY 316 +KK A I Sbjct: 258 LKKELKAANIDI 269 >gi|270295713|ref|ZP_06201913.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273117|gb|EFA18979.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 520 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 28/303 (9%), Positives = 88/303 (29%), Gaps = 44/303 (14%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 + L+ F + F + A + ING+ + + + G Sbjct: 1 MALMVRLFWVFFFLGFGL---AVSAQDDPVLMRINGKEVFRSEFERSYNKGGTSVGAG-- 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + A+ + + + + + G + Sbjct: 56 -RKALDAYVNKFI--------------------------------DFRLKIEAAEVAGLD 82 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK--QKMKNITVREYLIRTVLFSIPDN 190 + + Q + + ++ E E K R Y+ + + Sbjct: 83 TSRVFQKEQDEYRRCLIKSYLTDEETAEQEARQYYDKMKSGRRAGRVYVKHIFKYLPQNI 142 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250 ++ R+ + + + + D ++ + +F++++ Sbjct: 143 SGHTLREMESRMDSIYRALAKEGGAVPSFDACVEQFSDEKKAF--WVGWLQMPVEFEDIV 200 Query: 251 KK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKKL 308 + + P++T +G+ + + +++++ +K + Q ++K +V KL Sbjct: 201 FGLNAGEISRPFLTPQGIHIVKVLEQQEILPFERMKDKIIRCQTRRHGMDKGTRAFVDKL 260 Query: 309 RSN 311 + Sbjct: 261 KKE 263 >gi|229084142|ref|ZP_04216431.1| Foldase protein prsA 1 [Bacillus cereus Rock3-44] gi|228699178|gb|EEL51874.1| Foldase protein prsA 1 [Bacillus cereus Rock3-44] Length = 285 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 42/122 (34%), Gaps = 5/122 (4%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNN 256 + K +E + ++++ G Y + +F++ K ++ Sbjct: 141 EATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGYFGPGKMVKEFEDAAYKMKKDE 200 Query: 257 TTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRSNAI 313 + P +Q G I + D ++ KA + K++ + A+ ++ A Sbjct: 201 VSEPVKSQFGYHIIKVTDIKEPEKSFDDSKADIKKDLVAKKMQDGEFMAKLQEEELKKAD 260 Query: 314 IH 315 + Sbjct: 261 VK 262 >gi|217964409|ref|YP_002350087.1| foldase protein PrsA [Listeria monocytogenes HCC23] gi|217333679|gb|ACK39473.1| foldase protein PrsA [Listeria monocytogenes HCC23] gi|307571026|emb|CAR84205.1| protein export protein (post-translocation molecular chaperone) [Listeria monocytogenes L99] Length = 295 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 28/312 (8%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 +++ K++ + + + S + +T ++ + + Sbjct: 1 MTNLKKVMISVIAATLLLLAGCGSSA--------VVKTDAGSVTQDELYEAMKT------ 46 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 VQ+L + + + + + ++ E + + Sbjct: 47 --TYGNEVVQQLTFKKILEDKYTVTEKEVNAEY------------KKYEEQYGDSFESTL 92 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +N K + +V+ E ++ + + +R +L Sbjct: 93 SSNNLTKTSFKENLEYNLLVQKATEANMNLSESKLKTYYKTW----EPDITVRHIL---- 144 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQ 247 + K+ + K + +++++ + G ++ F+ Sbjct: 145 -------VDDEATAKEIQTKLKNGEKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFE 197 Query: 248 NLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-AQNTPTKIEKHEAEY 304 +++++ + + G I + K + G KA + A ++ Sbjct: 198 KAAYALENKDDVSGIVKSTYGYHLIQLVKKTEKGTYAKEKANVKAAYIESQLTTENMTAA 257 Query: 305 VKKLRSNAIIHY 316 +KK A I Sbjct: 258 LKKELKAANIDI 269 >gi|167626495|ref|YP_001676995.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596496|gb|ABZ86494.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 470 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 108/291 (37%), Gaps = 21/291 (7%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGEL-------EKIAVQELIVETLKKQEIEK 92 ++ +N + IT ++ + +A + N + A+Q+LI +++ Q E+ Sbjct: 53 NKTVAIVNSKPITSFELDQEVAKFEAMNPNSNFHSDSLQVRREALQDLIAQSVLLQLAER 112 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 + I + ++ A G+S E ++ G+ +K+ + Q + + + Sbjct: 113 NNIIISNQQLDAAIKDIAAKNGVSVESLKLNVEASGMSFESYKKRIREQLMVSQLQQQAI 172 Query: 153 MLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 + EI +K + ++ Y ++ ++ ++PD+K Q + K A Sbjct: 173 SQQVYVSPEEIQKYIKKHQEQFDREMAPIKLYTLKNLIVALPDSKKARQKKIDLFKKLAI 232 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQ-YLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 +++F+ + G + + +++ +K ++ + P++ Sbjct: 233 AVNKGYIDFSEVVKQFSQAPNATYGGIVSQQVKFDSIPSMYRDYVKDLKEHQVSEPFIVN 292 Query: 265 KGVEYIAICDKRDLGGEIALKAY------LSAQNTPTKIEKHEAEYVKKLR 309 ++ I I + + ++ K + + E+ + + R Sbjct: 293 HTLQMIYIDNIDEKAPMLSKKVTKYYVYAIEIKLDGGMSEEGAKSSLDRAR 343 Score = 43.9 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 27/271 (9%), Positives = 74/271 (27%), Gaps = 9/271 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + +A +KL L K +K I + +++ V + Sbjct: 191 QEQFDREMAPIKL-YTLKNLIVALPDSKKARQKKIDLFKKLAIAVNKGYIDFSEVVKQFS 249 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 +A + ++ + V F++ + + I +K Sbjct: 250 QAPNATYGGIVSQQVKFDSIPSMYRDYVKDLKEHQVSEPFIVNHTLQMIYIDNIDEKAPM 309 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ + I + ++ + + A + K+ + G Sbjct: 310 LSKKVTKYYVYAIEIKLDGGMSEEGAKSSLDRARLAIESGQDFTKVALKYNQDYDHAN-G 368 Query: 233 KAQYLLE-----SDLHPQFQNLLKKSQNNTTNPYVT-QKGVEYIAICDKRDLGGEIALKA 286 K +++ + F L + + P+ K + ++ LK Sbjct: 369 KFRWVSRLDSPPAIPPAAFAKLETMKEGEVSEPFQADPKTWMIMKYTKVKEHDAAEELKE 428 Query: 287 Y-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K ++ ++ ++ +A I Sbjct: 429 QKALEAIFSEKAQEVYKTWLTSMKDDAYIEI 459 >gi|241758711|ref|ZP_04756824.1| peptidyl-prolyl cis-trans isomerase [Neisseria flavescens SK114] gi|241320919|gb|EER57132.1| peptidyl-prolyl cis-trans isomerase [Neisseria flavescens SK114] Length = 617 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 28/260 (10%), Positives = 63/260 (24%), Gaps = 11/260 (4%) Query: 57 SKRIALLKLQKINGELEKIAVQ-ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 + + ++ Q L + L+ + +Q I + T + + A + Sbjct: 132 DQFVEDIREQFQLQNLLNLVQNGALVSDAQARQLINLTQATRTIRSFTFSPEAFAAQVKV 191 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + + + D K E+ Sbjct: 192 DDAALQKYYEAHKKDYLIPQAVKLEYVALNI---KDLADKQTVSAEEVQKAYDSKSVDLS 248 Query: 176 REYLIRTVLFSIPDNKLQ--NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IG 232 I + + N + N + K A E + K++ + + G Sbjct: 249 PRAEIAHIFIPVMPNGDEASNAEIKAEVDKMAAELKAHPDAFAELAAKYSKDLSSSNKGG 308 Query: 233 KAQYLLE----SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 YL + + + ++ + G I + + KA + Sbjct: 309 NLGYLSKSGGSGFGPEFDKAAFALGKGEVSDTIKSSLGYHVIKVLNVEAEPTLEQAKARI 368 Query: 289 SAQNTPTKIEKHEAEYVKKL 308 A K +KL Sbjct: 369 EAALKLKKAASAFNAAKEKL 388 >gi|332703851|ref|ZP_08423939.1| hypothetical protein Desaf_2729 [Desulfovibrio africanus str. Walvis Bay] gi|332554000|gb|EGJ51044.1| hypothetical protein Desaf_2729 [Desulfovibrio africanus str. Walvis Bay] Length = 374 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 30/307 (9%), Positives = 93/307 (30%), Gaps = 28/307 (9%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------GELE 73 ++ + + + + S + +NG I + + ++ L + +L Sbjct: 7 LLMALLASIIVTACSSDRSEPGVIAMVNGRPIHLNQLEYKYDIMYLDSTDDLNPTVNQLR 66 Query: 74 KI---AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + +LI++ L QE+ G+ +N ++ F L ++ I Sbjct: 67 TDYGTILSDLIIQELIIQELADRGLEVTDEELNKAEDSVRKD--YPEGAFEEILVEEYID 124 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + +++ + ++ E + + + ++ ++ + P Sbjct: 125 ISFWRKEFKARISIEKFLQQVLRPSIKIDYTEADSYYRSHLSDFYLPSRLKFLIITGP-- 182 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL- 249 ++ +L A+K+ +V + + + E L + N Sbjct: 183 -----------SRELVLKATQLFSKGEAAADIAAKLKEVEVRQL-RMREDRLPASWLNAL 230 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKK 307 ++ + + + ++ +AY + K+ ++ + Sbjct: 231 ANLEPGEASSVLTEESKFHRLILVERSPAKVLDPTQAYPLVEQVLLDQKMRDAFNAWLAR 290 Query: 308 LRSNAII 314 A I Sbjct: 291 KLEVATI 297 >gi|327398937|ref|YP_004339806.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hippea maritima DSM 10411] gi|327181566|gb|AEA33747.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hippea maritima DSM 10411] Length = 631 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 28/230 (12%), Positives = 74/230 (32%), Gaps = 4/230 (1%) Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 +++ + + K +K+ + + V++ + E + F K D Sbjct: 169 KRLFKDVKVSDKDVKSFFDKNYSKINLDFVSFDISSFKSKVKVDDEKLNKFYQK-HKSDY 227 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + I + +K + E E N K + +L S DN+ Sbjct: 228 RIPTMVKFEYIVVPLSYVKKKIKVTDNETEAFYNAHKDYFKVPLRIKVAHILISSKDNQT 287 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLK 251 ++ + ++ + + G+ Y+ + + + N++K Sbjct: 288 DSKLRKKADDVYKLLEDKKISFKEAAKKYSSDDYTRNVGGELGYVTKDMVIDEFWNNIIK 347 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEK 299 + + P+ T+ G + D + + ++K + K +K Sbjct: 348 LKRGEISKPFKTKFGYHIALVEDIKKPFVRPFKSVKDQIKDYLKTNKAKK 397 Score = 37.7 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 24/249 (9%), Positives = 59/249 (23%), Gaps = 3/249 (1%) Query: 70 GELEKIAVQEL-IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 ++ L + K +E I + A+ GL ++ K Sbjct: 380 KSVKDQIKDYLKTNKAKKVWFVEADKIFVKIRDSKESMKKAAKEFGLPFKETDYMSLKNP 439 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K + + G + ++ K + + Sbjct: 440 QTPFTAKMVQNALLSNKGALLGPDLSSAGYVIYKLTDKKPSYIPPFDKVKDKIKKDYIEK 499 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 + ++ L + + ++S L + Sbjct: 500 QAIKLALAQADNIL-KQIKASKSLKDVALAFKLKVETVKNLSKLMPTDKFPCSLKEDIMS 558 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + + K + + DK D LK + + K + +++ K Sbjct: 559 RIFQKGKGYADKCQQGKKIYVFEVTDKIFDEKEFNKLKESIRNELISEKENEILEKFIDK 618 Query: 308 LRSNAIIHY 316 L+ I Sbjct: 619 LKKQTKIKI 627 >gi|92113460|ref|YP_573388.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chromohalobacter salexigens DSM 3043] gi|91796550|gb|ABE58689.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chromohalobacter salexigens DSM 3043] Length = 270 Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 12/175 (6%), Positives = 49/175 (28%), Gaps = 4/175 (2%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 + + + + + + +R +L + + + + + + Sbjct: 84 LERELEVPEPSEADCRRFHAAHAERFSEPTRLRVRHILLAAAPDDAEARDTGYRLGETLI 143 Query: 207 ESRLR-LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQ 264 + ++ ++ G+ +L P+ + L + P ++ Sbjct: 144 TQLSECPERFTEFAQRHSACPSKDKGGELGWLAPGQTVPELDRALQHLATGLHARPLASR 203 Query: 265 KGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 G +++ + + A+ + + Y+ L + I + Sbjct: 204 YGWHLVSLDAREEGRALPYDAVAERVRHSLREQATRRALRHYLLALEDDIGIQGF 258 >gi|134291084|ref|YP_001114853.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia vietnamiensis G4] gi|134134273|gb|ABO58598.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia vietnamiensis G4] Length = 262 Score = 65.9 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 19/181 (10%), Positives = 46/181 (25%), Gaps = 5/181 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + +++ + + + R ++ + ++ Sbjct: 69 DDAAVDALLERELTHVPQPDRADCERYYSRHAARFRRGDIVYASHVLFAVTERVPLAPLR 128 Query: 200 KRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQN--LLKKSQNN 256 +R + A L P ++ G LL D P+F+ + Sbjct: 129 ERAQAALADVLAAPDTFEAVARASSNCPSAQVGGNLGQLLRGDTVPEFEAALFDGDALGV 188 Query: 257 TTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T+ G + I + ++ ++ +YV L A I Sbjct: 189 LPKLVNTRFGFHIVRIERRVPGAAVPFDEAAGQIAEYLAQCVRQRAMRQYVAVLAGAARI 248 Query: 315 H 315 Sbjct: 249 E 249 >gi|228924392|ref|ZP_04087629.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835272|gb|EEM80676.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 290 Score = 65.9 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 18/199 (9%), Positives = 51/199 (25%), Gaps = 7/199 (3%) Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 D + + + + + + + + + + Sbjct: 78 DDETKKNVDELKKEMGDNFKSYLTQKNVKNEDELKDKLKTQMAFEKAIKASITEKEIKNY 137 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL- 242 + +K K+ +E ++ + G+ L + Sbjct: 138 YKPILKVSHILVKDEKTAKEIKEKINNSEDFTTVAKEHSEDPGSKEKGGELGELNAFQMD 197 Query: 243 ---HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT--KI 297 + + P + G I + +K++L K +S + K Sbjct: 198 RMDPKFKEATYNLETGQVSEPIKSSFGYHIIKMIEKKELKPFNQEKENISKELEAKRLKD 257 Query: 298 EKHEAEYVKKLRSNAIIHY 316 ++ + ++ K L A I Sbjct: 258 QQWQQKFFKDLFKQADIKI 276 >gi|145632388|ref|ZP_01788123.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae 3655] gi|144987295|gb|EDJ93825.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae 3655] Length = 622 Score = 65.9 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 45/395 (11%), Positives = 106/395 (26%), Gaps = 84/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + + + F + + Y ++ + +NGEVI+ D R Sbjct: 2 LIEKMHNLSNSKAAKFILGLITLSFLVGGMSGYL-FSSNDTYAAKVNGEVISQQDFLNRY 60 Query: 61 ALLKLQKINGE----------------LEKIAVQELIVETLKKQEIE------------- 91 + E L + V +I + L +Q ++ Sbjct: 61 NQEFEARAQREGEAFMAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120 Query: 92 ----KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 N + + + L+++ ++S L + + I P Sbjct: 121 AIVTDPNFQVKGKFDNSVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180 Query: 148 VK-------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 VK D M K + EI + + V+ ++ + Sbjct: 181 VKNSAEIFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLS 240 Query: 189 DNKLQNQGFV----------------------------QKRIKDAEESRLRLPKDCNKLE 220 + + V ++ K E + + + Sbjct: 241 ADNISKNLQVTDIEIAQYYQDNKAQFMTQRLAHIQFANEQDAKVVYEELQKGANFADVAK 300 Query: 221 KFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278 + KI + G ++ ++L F++ + P + + +++ Sbjct: 301 TKSLDKISGENGGDLGWVNANELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK-A 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +KA + + IE K+ A Sbjct: 360 QSLENVKAQIVDLVRKSLIESRYFSLEKQASDKAF 394 >gi|103486661|ref|YP_616222.1| hypothetical protein Sala_1173 [Sphingopyxis alaskensis RB2256] gi|98976738|gb|ABF52889.1| hypothetical protein Sala_1173 [Sphingopyxis alaskensis RB2256] Length = 673 Score = 65.9 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 42/405 (10%), Positives = 95/405 (23%), Gaps = 90/405 (22%) Query: 1 MTSKVFTSLSDFI-KLLTTYFVLIIFCIVPIVSYKSWAMSSRI----RTTINGEVITDGD 55 M + + S I K L FV+++ + + I + GE I G+ Sbjct: 26 MITAIRAMFSSTIGKFLALAFVVLVGVAFALSDVTGNSTFGGIGGANVAKVGGEEIGVGE 85 Query: 56 ISKRIALLKLQKINGELE------------KIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + R+ Q + + +LI Q + G ++ Sbjct: 86 LRDRVRQAYDQARRNQPGLTMAAFVENGGLDQVLGQLIDGLAFDQYATELGFGVSKRLID 145 Query: 104 YFFVQHARNTGLSAED----FSSFLDKQGIGDNHFKQYLAIQSIWPD------------- 146 G+S + F +FL + GI + ++ L Q + Sbjct: 146 GRIADLPAFAGVSGKFDQTVFENFLRQNGISEAQLRRDLRQQILLEQLAAPIAQMPRIAP 205 Query: 147 ---------VVKNDFML-----------------------------KYGNLEMEIPANKQ 168 +++ K+ E + Sbjct: 206 ALAEPYAALLLEQRRGQATFIPASAFAPKGDPGDAALRRFLTQNAAKFTVPERRVIQYAM 265 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-------- 220 + + + + + + R + + + Sbjct: 266 FDRASVPVPAVTDAEIARVYKDNAAQYAATETRRFAQVILPDQAAANRLAAKVRSGASLA 325 Query: 221 --KFASKIHDVSIGKAQ--YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK- 275 + + + G + + + P T G + + D Sbjct: 326 SAAAEAGLSASTTGDLGQSAYAATTSAAVARAAFAAKRGEVVGPLQTGLGWTVVRVEDVT 385 Query: 276 -RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN----AIIH 315 R A + A+ K + +Y ++ A I Sbjct: 386 TRPARSLADASAEIRAELASNKANEAIVDYYNAIQDAVNSGASIE 430 >gi|146308191|ref|YP_001188656.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas mendocina ymp] gi|145576392|gb|ABP85924.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas mendocina ymp] Length = 93 Score = 65.9 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 8/82 (9%), Positives = 25/82 (30%), Gaps = 1/82 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 + + + + + + +S + G + +F ++ + Sbjct: 12 ASEDKCNELKAAIEGGADFAQLAKDNSSCPSGRNGGDLGSFGPGQMVKEFDTVVFSAPVG 71 Query: 256 NTTNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 72 VVQGPVKTQFGYHLLEVTSRQD 93 >gi|309792550|ref|ZP_07687012.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oscillochloris trichoides DG6] gi|308225364|gb|EFO79130.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oscillochloris trichoides DG6] Length = 523 Score = 65.9 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 15/184 (8%), Positives = 36/184 (19%), Gaps = 18/184 (9%) Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 ++ K P + + + + + R Sbjct: 257 YHEQLLNTRVQEKLVPEAEFTPGDVPTKVTARQILVAVTPPAEATQEQIDALFVTAKARA 316 Query: 203 KDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES--------DLHPQFQNLLKKS 253 + + G + L Sbjct: 317 DALLADLRNGADFATLAAEESDDPGSASMGGDLGSFDKDGKADNGATYPPELVAAALALP 376 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 N + P TQ G + + D R + E + +++ + RS Sbjct: 377 ANTLSEPVRTQFGWHILEVTD-RTVPTEEDQLREARTK--------ALDDWLTQQRSAIA 427 Query: 314 IHYY 317 + + Sbjct: 428 VQRF 431 >gi|299138720|ref|ZP_07031898.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidobacterium sp. MP5ACTX8] gi|298599356|gb|EFI55516.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidobacterium sp. MP5ACTX8] Length = 656 Score = 65.9 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 27/270 (10%), Positives = 70/270 (25%), Gaps = 9/270 (3%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I+ + + + L V + + + + + G + Sbjct: 157 ISVPEFEAEVKSDLELQRLQSLVTAGVT--VSDAAVRADYMQQGTKVKFDYAVIAASDIK 214 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK--Q 168 + S D +F + ++ N K + ++ A Sbjct: 215 KTINPSDADLQAFFKQFAARYATAIPETRKLELFSFDASNIPGGKPQVNDADVQAYYNAH 274 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE-ESRLRLPKDCNKLEKFASKI- 226 + + R +L ++ K + + + +K + Sbjct: 275 LDQYKLPEQVKTRHILITVAKGADAKTDAAAKAKAEDILKQIRAGGNFADLAKKNSDDPG 334 Query: 227 HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--A 283 G+ + S P++ + + + T++ +Q G I K + Sbjct: 335 SKDQGGELPLMPTSGFVPEYSKAAMALNPGQTSDLVRSQFGYHIIQTEQKEAAHTKTLAE 394 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 K + K E + +L + A Sbjct: 395 TKDTIVPLLQQQKAGAAELNFANQLAAEAK 424 Score = 38.9 bits (88), Expect = 0.97, Method: Composition-based stats. Identities = 16/170 (9%), Positives = 40/170 (23%), Gaps = 9/170 (5%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 +V++ F E + A+ + + + + + A Sbjct: 369 LVRSQFGYHIIQTEQKEAAHTKTLAETKDTIVPLLQQQ-------KAGAAELNFANQLAA 421 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG 266 E++ + D +D ++ T +G Sbjct: 422 EAKKNGMQKTADAHSLHLVTTDYIGHDGVIASLADSSNVLTQAFGVAKGAAPATASTGEG 481 Query: 267 VEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + D + K ++ K + + KL A + Sbjct: 482 YAVFQVDDIKAAHAPDFADYKPHILDDYREQKAPELLNSQLIKLADRAKV 531 Score = 35.8 bits (80), Expect = 8.1, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 33/133 (24%), Gaps = 4/133 (3%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 +L + K Q L K K D+ AQ Sbjct: 504 HILDDYREQKAPELLNSQLIKLADRAKVLNDLKKAAAEMNVPVKTSDLVGRDAQVPDLGA 563 Query: 242 LHPQFQNLLKKSQNNTTNPY-VTQKGVEYIAICDKRDLGGEIALKA--YLSAQNTPTKIE 298 L + + + P G I + DK++ + K + K E Sbjct: 564 LTGPASVVFSLPKGGISGPINEGPNG-SVIQLADKQEPTADDIAKNLPTSREKLLNVKRE 622 Query: 299 KHEAEYVKKLRSN 311 + +V L Sbjct: 623 EIFNVFVGSLMDK 635 >gi|298528165|ref|ZP_07015569.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] gi|298511817|gb|EFI35719.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] Length = 312 Score = 65.9 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 98/311 (31%), Gaps = 27/311 (8%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQKINGELEK 74 + ++F V + + T+NG+ I ++ + + +L++ Sbjct: 5 FFVTALVFLAVLAWGCSPDSPEEGVVATVNGQPIYLDEVESGYDADYFKWSRGVPPDLKE 64 Query: 75 I------AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 I + +L+V+ L +QE+ SG D V + ++ F L ++ Sbjct: 65 IKSSYGRVLLDLVVQKLIEQELNSSGHAVDPGEVAKIEREIRQD--YPDGGFEEVLIEEH 122 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 I ++ + +W K + ++ Y+ ++F Sbjct: 123 IDLEFWRASILKDLMWDKFKKEVLRPRISLDVEDVKEYYHYHIEDF---YIPERIVFLHL 179 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 + +++ E R+ + K V++G+ + ++ Sbjct: 180 SSGKEDKLQEVLDTFQESEDISRIRE----------KYPQVNVGEYEMRVDRLPLGLQDE 229 Query: 249 LLKKSQNNTTNPYVTQKG-VEYIAICDKRDLGGEIALK--AYLSAQNTPTKIEKHEAEYV 305 L + + ++G + + D++D + + K+ K ++ Sbjct: 230 LTGLQKGEKSQIQKNRQGLYYRVMVMDRKDSKLLKPHQVYDIIEENLVQEKMHKVFYNWL 289 Query: 306 KKLRSNAIIHY 316 + + I Sbjct: 290 ETTVDESDIKI 300 >gi|319638362|ref|ZP_07993124.1| peptidyl-prolyl cis-trans isomerase [Neisseria mucosa C102] gi|317400111|gb|EFV80770.1| peptidyl-prolyl cis-trans isomerase [Neisseria mucosa C102] Length = 617 Score = 65.9 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 29/260 (11%), Positives = 68/260 (26%), Gaps = 11/260 (4%) Query: 57 SKRIALLKLQKINGELEKIAVQ-ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 + + ++ Q L + L+ + +Q I + T + + A + Sbjct: 132 DQFVEDIREQFQLQNLLNLVQNGALVSDAQARQLINLTQATRTIRSFTFSPEAFAAQVKV 191 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + + + A++ + + D K E+ Sbjct: 192 DDAALQKYYEA---HKKDYLIPQAVKLEYVALSIKDLAEKQTVSAEEVQKAYDSKSVDLS 248 Query: 176 REYLIRTVLFSIPDNKLQ--NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IG 232 I + + N + N + K A E + K++ + + G Sbjct: 249 PRAEIAHIFIPVMPNGDEASNAEIKAEVDKMAAELKAHPDSFAELAAKYSKDLSSSNKGG 308 Query: 233 KAQYLLE----SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 YL + + + ++ + G I + + KA + Sbjct: 309 NLGYLSKSGGSGFGPEFDKAAFALGKGEVSDTVKSSLGYHVIKVLNVEAEPTLEQAKARI 368 Query: 289 SAQNTPTKIEKHEAEYVKKL 308 A K +KL Sbjct: 369 EAALKLKKAASAFNAAKEKL 388 >gi|126666859|ref|ZP_01737835.1| peptidyl-prolyl cis-trans isomerase C2 [Marinobacter sp. ELB17] gi|126628575|gb|EAZ99196.1| peptidyl-prolyl cis-trans isomerase C2 [Marinobacter sp. ELB17] Length = 92 Score = 65.9 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 27/80 (33%), Gaps = 1/80 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 + + ++ ++ +K +S + G + P+F ++ + N Sbjct: 12 DTEAKCEELKKDIEGGQDFAEVAKKHSSCPSGGNGGDLGSFGPGQMVPEFDTVVFSADLN 71 Query: 256 NTTNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 72 TVQGPVKTQFGYHLLEVTSR 91 >gi|124516598|gb|EAY58106.1| putative peptidyl-prolyl cis-trans isomerase [Leptospirillum rubarum] Length = 324 Score = 65.9 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 23/212 (10%), Positives = 58/212 (27%), Gaps = 4/212 (1%) Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + N + ++ L E + + + + Q L Sbjct: 83 SERNAALRETVQDFFLEEEGKKRGIKIRPNEIKDYLKNHFPQPEKSLEPFARKALFLQKT 142 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD--AEESRLRLPKDCN 217 E + + Y LF I + + V K+ + ++ ++ Sbjct: 143 EEALAPFPDISISTERSFYKNHQNLFRISRQAIVDHIVVAKQEEAESIRDALIKGSSFAR 202 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + + S G+ + + P F + T + G + Sbjct: 203 LAKLESLGMEASSGGRMKPYPRGTMPPPFDTVFTMKPGEITPVLSSPYGYHLFRLEKFIP 262 Query: 278 --LGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 +K ++ + T K +K E++ + Sbjct: 263 EHTLSFSMVKNWIKKKLTRVKRQKVLQEWLAQ 294 >gi|116872876|ref|YP_849657.1| peptidyl-prolyl isomerase (post-translocation molecular chaperone) [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741754|emb|CAK20878.1| peptidyl-prolyl isomerase (post-translocation molecular chaperone) [Listeria welshimeri serovar 6b str. SLCC5334] Length = 294 Score = 65.9 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 26/312 (8%), Positives = 86/312 (27%), Gaps = 47/312 (15%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 ++ K++ + + + S + +T ++ + + Sbjct: 1 MTKLKKVMISVIAATLLLLAGCGSSA--------VVKTDAGSVTQDELYEAMKT------ 46 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 VQ+L + + + + + ++ E + + Sbjct: 47 --TYGNEVVQQLTFKKILEDKYTVTEKELNAEY------------KKYEEQYGDSFESTL 92 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +N K + +V+ + ++ + + +R +L Sbjct: 93 SSNNLTKTSFKENLEYNLLVQKATEANMKVSDSKLKTYYKTW----EPDITVRHIL---- 144 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQ 247 + K+ + K + +++++ + G ++ F+ Sbjct: 145 -------VDDEATAKEIQTKLKNGEKFSDLAKEYSTDTATKTNGGLLDPFGPGEMDETFE 197 Query: 248 NLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEY 304 +++++ + + G I + K + G KA + ++ Sbjct: 198 KAAYALENKDDISGIVKSTYGYHLIQLVKKTEKGSYEKEKANVKKAYIKSQLTSENMTAA 257 Query: 305 VKKLRSNAIIHY 316 +KK A I Sbjct: 258 LKKELKAANIDI 269 >gi|194333180|ref|YP_002015040.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Prosthecochloris aestuarii DSM 271] gi|194310998|gb|ACF45393.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Prosthecochloris aestuarii DSM 271] Length = 694 Score = 65.9 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 12/100 (12%), Positives = 26/100 (26%), Gaps = 2/100 (2%) Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY 236 +L P + ++R +F+ G + Sbjct: 342 VRASHILLGFPAGDAAARNDAEERAASIMNELKNGKSFDLLAREFSDDPGSAPHGGDLGW 401 Query: 237 LLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDK 275 + + P F+ + P TQ G+ I + + Sbjct: 402 FAKGAMVPDFEKAAFGAAPGRVVGPVATQFGLHIIKVTGR 441 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 25/75 (33%), Gaps = 2/75 (2%) Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKH 300 + L ++ + P T+ G IA+ K D + L K E+ Sbjct: 615 PFLLEALSGMKPSSVSLPVETRSGRALIALESKSYPDGMDPDEARRRLRPLVERAKTEQV 674 Query: 301 EAEYVKKLRSNAIIH 315 +Y LR A I Sbjct: 675 IEDYFNALRREATIE 689 >gi|54294744|ref|YP_127159.1| hypothetical protein lpl1821 [Legionella pneumophila str. Lens] gi|53754576|emb|CAH16060.1| hypothetical protein lpl1821 [Legionella pneumophila str. Lens] Length = 624 Score = 65.9 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 25/255 (9%), Positives = 72/255 (28%), Gaps = 8/255 (3%) Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 K + L + + EI++ + + + A+ Sbjct: 145 FQKEVRQGMLLNQQRFAFMGTSFALSDEIKRFVRLYMQTRDYDYLTVPSDRFEQQAKISE 204 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVK-NDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + ++ ++ +D + EI + ++ K+ + Sbjct: 205 DDIKSYYNQHHKKFMTSEQVTLDYVLLSMHDIKSQIKISPDEIKSYYEENKSNYLTPAQW 264 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-----SIGKAQ 235 R + + + A+E L K + +K+ + D + G Sbjct: 265 RVAHILFAVPENATKEEQDSIKQKADEVYNDLKKHPEQFDKYVASKSDDKLSIANKGILP 324 Query: 236 YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNT 293 ++ + P T+ G E + + + + ++ + Q T Sbjct: 325 WITGGQNEYDRVLSNLTRPGQISIPVQTKYGYEIFKLIAYKPVTTKSLQEVENIIKDQLT 384 Query: 294 PTKIEKHEAEYVKKL 308 + A+ +++L Sbjct: 385 SDMAQAKYAQVLEQL 399 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 83/317 (26%), Gaps = 20/317 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + + L + I F + + Y S + +N + IT Sbjct: 1 MLQKLNEHIQGVVAWLVIILIAITFTLFGVDYYFQSRQISDAKVIVNDKPITMQAFETNY 60 Query: 61 ALLKLQK--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + Q+ L+ + ++I + Q K G N VQ + Sbjct: 61 RRTRAQQDLPQMTAADEKNLQNQVLNQMITNEVSIQAARKYGFEVSPEQANAAIVQIPQF 120 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + + F + + + Sbjct: 121 QEDGHFSAQRYQQALSGALFTPETFQKEVRQGMLLNQQRFAFMGTSFALSDEIKRFVRLY 180 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + R+Y L D Q + IK + ++ + I Sbjct: 181 MQTRDYDY---LTVPSDRFEQQAKISEDDIKSYYNQHHKKFMTSEQVTLDYVLLSMHDIK 237 Query: 233 KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD---KRDLGGEIALKAYLS 289 + + ++ +++++N P + A+ + K + + Sbjct: 238 SQIKIS----PDEIKSYYEENKSNYLTPAQWRVAHILFAVPENATKEEQDSIKQKADEVY 293 Query: 290 AQNTPTKIEKHEAEYVK 306 K + +YV Sbjct: 294 NDL--KKHPEQFDKYVA 308 >gi|17547900|ref|NP_521302.1| signal peptide protein [Ralstonia solanacearum GMI1000] gi|17430206|emb|CAD16969.1| putative peptidyl-prolyl isomerase signal peptide protein [Ralstonia solanacearum GMI1000] Length = 281 Score = 65.9 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 34/286 (11%), Positives = 76/286 (26%), Gaps = 54/286 (18%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 + +NG IT + + IA Q ++ + Q+LI L +Q+ K+ Sbjct: 35 VVALVNGTRITQEQLDRAIAQSGAQANP-QVAQALKQQLIARELFRQQAAKNPAYDKLPA 93 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 V Q I +K++ E Sbjct: 94 VKQAM-----------------------------QEAHDAVITQAWLKDNIKPAPITEEQ 124 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + ++ +EY R + Q +++ ++ Sbjct: 125 VKARYDAIVASLGDKEYKARVIQLGDDVTAAQVLAQLKQ-----------GGDFAKLAQQ 173 Query: 222 FASKIHDVSIGKAQYL---------LESDLHPQFQNLLKKSQNNT--TNPYVTQKGVEYI 270 +++ + V G ++ +L + T P + Sbjct: 174 YSTAPNKVRGGDMDWVSFKVPVEEGKTQNLPLPLAREIAALGIGAASTAPVEVGSQRYIV 233 Query: 271 AICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + R + G ++ + ++E+ + V L A I Sbjct: 234 KVEAARPTQVPGYDTVRPAIRQALETAELERVTVQVVGGLLKAAKI 279 >gi|218509345|ref|ZP_03507223.1| probable peptidyl-prolyl cis-trans isomerase protein [Rhizobium etli Brasil 5] Length = 147 Score = 65.9 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 9/145 (6%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + + KR +AE SR + P ++ + FA+ + DV++ +L Sbjct: 3 YMLQQIIFVIPEAKRGAITGKRKGEAEASRSKFPGC-DQAKVFAATMRDVAVRDLGRMLA 61 Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI-- 297 ++ P ++ L+++++ NTT VT KGVEY+AIC +R + + A + ++ Sbjct: 62 PEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAICSQRQVSDDQAAEMVFRQEDLDKSKAG 121 Query: 298 ------EKHEAEYVKKLRSNAIIHY 316 ++ +Y+ +LR A I Y Sbjct: 122 KNGPPENENSKKYLDELRKKAQIAY 146 >gi|46907672|ref|YP_014061.1| protein export protein [Listeria monocytogenes serotype 4b str. F2365] gi|226224045|ref|YP_002758152.1| protein secretion PrsA (post-translocation molecular chaperone) [Listeria monocytogenes Clip81459] gi|254824497|ref|ZP_05229498.1| rotamase [Listeria monocytogenes FSL J1-194] gi|254852070|ref|ZP_05241418.1| rotamase [Listeria monocytogenes FSL R2-503] gi|254932629|ref|ZP_05265988.1| rotamase [Listeria monocytogenes HPB2262] gi|300765586|ref|ZP_07075565.1| protein export protein [Listeria monocytogenes FSL N1-017] gi|67461027|sp|Q71ZM6|PRSA1_LISMF RecName: Full=Foldase protein prsA 1; Flags: Precursor gi|46880940|gb|AAT04238.1| protein export protein [Listeria monocytogenes serotype 4b str. F2365] gi|225876507|emb|CAS05216.1| Putative protein secretion PrsA (post-translocation molecular chaperone) [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605367|gb|EEW17975.1| rotamase [Listeria monocytogenes FSL R2-503] gi|293584188|gb|EFF96220.1| rotamase [Listeria monocytogenes HPB2262] gi|293593735|gb|EFG01496.1| rotamase [Listeria monocytogenes FSL J1-194] gi|300513687|gb|EFK40755.1| protein export protein [Listeria monocytogenes FSL N1-017] gi|332311885|gb|EGJ24980.1| Foldase protein prsA 1 [Listeria monocytogenes str. Scott A] Length = 294 Score = 65.9 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 28/312 (8%), Positives = 87/312 (27%), Gaps = 47/312 (15%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 ++ K++ + + + S + +T ++ + + Sbjct: 1 MTKLKKVMISVIAATLLLLAGCGSSA--------VVKTDAGSVTQDELYEAMKT------ 46 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 VQ+L + + + + + ++ E + + Sbjct: 47 --TYGNEVVQQLTFKKILEDKYTVTEKEVNAEY------------KKYEEQYGDSFESTL 92 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +N K + +V+ E ++ + + +R +L Sbjct: 93 SSNNLTKTSFKENLEYNLLVQKATEANMNVSESKLKTYYKTW----EPDITVRHIL---- 144 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQ 247 + K+ + K + +++++ + G ++ F+ Sbjct: 145 -------VDDEATAKEIQTKLKNGEKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFE 197 Query: 248 NLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-AQNTPTKIEKHEAEY 304 +++++ + + G I + K + G KA + A ++ Sbjct: 198 KAAYALENKDDVSGIVKSTYGYHLIQLVKKTEKGTYAKEKANVKAAYIESQLTTENMTAA 257 Query: 305 VKKLRSNAIIHY 316 +KK A I Sbjct: 258 LKKELKAANIDI 269 >gi|226227553|ref|YP_002761659.1| putative peptidyl-prolyl cis-trans isomerase [Gemmatimonas aurantiaca T-27] gi|226090744|dbj|BAH39189.1| putative peptidyl-prolyl cis-trans isomerase [Gemmatimonas aurantiaca T-27] Length = 469 Score = 65.9 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 29/289 (10%), Positives = 63/289 (21%), Gaps = 43/289 (14%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 L + +V A + + ++ +++ +A + IA + + Sbjct: 6 LSVLALVAFAVACGAASNPDVAAKAGDTELSSARLAEVLAQSQAPLEKDVARNIA-ELWV 64 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 L + D+ + N Sbjct: 65 NYQLVGLAAANNDSLSDAKVMQEALWSQIDN----------------------------- 95 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + F + + + ++ R +L N Q V K+ Sbjct: 96 -----IRVKKFYDNVSKGWDSLSPGTDESRYMSGEALAARHILVKTEPNATPEQIGVAKK 150 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNP 260 D + K G + P+F+ L + Sbjct: 151 KADGILAEATTANFAVLAAKSDEPGAKERGGDLGLFQRGMMVPEFEKCLLVLKPGEISKE 210 Query: 261 Y-VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 T G I + + + E+ Y+ KL Sbjct: 211 VCQTSFGFHIIY------RSPFADVAEKFAPVAKQRNVAIAESTYLAKL 253 >gi|294788198|ref|ZP_06753441.1| putative signal peptide protein [Simonsiella muelleri ATCC 29453] gi|294483629|gb|EFG31313.1| putative signal peptide protein [Simonsiella muelleri ATCC 29453] Length = 292 Score = 65.9 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 87/311 (27%), Gaps = 35/311 (11%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----- 70 + F L ++ +S +A + T+NG I D+ +R ++ Sbjct: 1 MKKTFKLTTVAVLFALSGSLFAAT---VVTVNGVKIDSSDVERRAENVQKNTQGQISDGP 57 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 +L + ELI E L QE ++ + S+ + + + F Sbjct: 58 QLRQFITNELITEQLVVQEAKRLKLDKSSDYQAAEAEALKQAKAQGLDKQADFKQNWADY 117 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 ++ + + A Q+ N Y + + Sbjct: 118 -------------QNRLLMLAYAANLAKQQPISEAAAQQQYNQIKSRYAGSSEIQLGEIV 164 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ--YLLESDLHP---- 244 + + K + +K++ + G Y+ DL Sbjct: 165 TNKPADAEAA-----INDLTKKKKFSDVAKKYSMSKSSQTSGGIVPEYVALPDLKDGNNL 219 Query: 245 QFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 +Q + S+ T P + + DKR + + A ++ + Sbjct: 220 VYQAVNGLSKGQFTKTPVKDGNVSLVLYVNDKRAINV--PTFNEMKASIVQQMEDEQLSL 277 Query: 304 YVKKLRSNAII 314 + L A I Sbjct: 278 AIDNLGKKAKI 288 >gi|268592032|ref|ZP_06126253.1| peptidyl-prolyl cis-trans isomerase D [Providencia rettgeri DSM 1131] gi|291312424|gb|EFE52877.1| peptidyl-prolyl cis-trans isomerase D [Providencia rettgeri DSM 1131] Length = 651 Score = 65.9 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 33/398 (8%), Positives = 92/398 (23%), Gaps = 85/398 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T + + + +++ F + ++ S+ +NG+ I+ + + Sbjct: 29 MMENLRTKANSPLLKIILALIILSFVLGGVMMGGLGGNSANNAAEVNGQSISREQLQQAF 88 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + L + A+ LI L Q + ++ + Sbjct: 89 QQERQSLQEYLGDKFSEVASNEESMNLLRRQALDNLINNELINQYANELQLSASDQQIEQ 148 Query: 105 FFVQH---ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------ 149 + + +E + L + I + + + K Sbjct: 149 YIFSMPVFQTDGRFDSEKYREILSRNNINADSLAAQIRQDLTRAQLGKTFTGTDFALPSE 208 Query: 150 ---------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI- 187 + K E E+ A +N + ++ + Sbjct: 209 VKAYAELFMQEREIRTAILDLAEVQAKQTASEEELKAYYDANQNSFISPEKVQVSYVEMD 268 Query: 188 -----------------------------PDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 Q +K D + Sbjct: 269 AASMPPATVSAEEVKAYYDQNLKNYTQAEQKQYSMIQVASEKEANDILNELKQGADFATL 328 Query: 219 LEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + ++ G ++ + + + + P +Q + D + Sbjct: 329 ATEKSTDKFSAGQKGLIGWMEAASTPSEIVAAKLTEKGQLSAPVKSQNSYVIFRLDDIKP 388 Query: 278 --LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ + K K + +K+ A Sbjct: 389 ESIKPFEQVEESIKTSLLQDKNIKQFYDLQQKVSEAAT 426 >gi|317495597|ref|ZP_07953965.1| ppic-type ppiase domain-containing protein [Gemella moribillum M424] gi|316914411|gb|EFV35889.1| ppic-type ppiase domain-containing protein [Gemella moribillum M424] Length = 308 Score = 65.9 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 90/313 (28%), Gaps = 29/313 (9%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 ++ F K + + + + S + +SS+ +T+ DI + I Sbjct: 1 MNKFKKAILPVALSVSVIGLAGCSGGTKYISSKA------GDVTEKDIVESI-------G 47 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 +L K A +I + L +K D + + G + +Q Sbjct: 48 ASQLSKTATSMMIQKVLL----DKYKGKIDEKAIEEQLQKAQTQYGGKEKF------EQL 97 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + F + + + Y + + I + S Sbjct: 98 LKQQGFTLDKYKDGLKVKAAQTLLINDYTGTNEDKLKENYEKNKHQYHLAHILISVKSNS 157 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESD---LHP 244 + + +K+ ++ + ++ + + + G + + D + Sbjct: 158 NPNGLSDEDAKKKAEELHKKIKDGEDFATLAKENSNDTANASNGGDLGWSSKEDNSFVKE 217 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP--TKIEKHEA 302 + +++ ++ T G I + D++D + K + Sbjct: 218 FKEAAYALTKDKVSDVVKTSFGYHIIKVLDEKDATFDEMKATLAEKAAEEAVKKDSTVVS 277 Query: 303 EYVKKLRSNAIIH 315 + +KKL + Sbjct: 278 KALKKLFEEYNVK 290 >gi|149924625|ref|ZP_01912979.1| Parvulin-like peptidyl-prolyl isomerase [Plesiocystis pacifica SIR-1] gi|149814510|gb|EDM74097.1| Parvulin-like peptidyl-prolyl isomerase [Plesiocystis pacifica SIR-1] Length = 105 Score = 65.9 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 7/81 (8%), Positives = 20/81 (24%), Gaps = 1/81 (1%) Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 +++ +++I E + + + G + + F+ Sbjct: 22 TRSKAEAEQQINALAEQIRGGADFGDLAKANSDCPSGAKGGDLGSFGKGQMVKPFEVAAF 81 Query: 252 -KSQNNTTNPYVTQKGVEYIA 271 + T G I Sbjct: 82 GMDVGQVSGVIETDFGYHIIK 102 >gi|167839788|ref|ZP_02466472.1| peptidylprolyl isomerase [Burkholderia thailandensis MSMB43] Length = 237 Score = 65.5 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 46/174 (26%), Gaps = 5/174 (2%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 ++ + + + R ++ +++ + A Sbjct: 51 LLARELTHLPEPTRDDCERYYRNHAERFRRRDIVHASHILFAVTDATPLAPLRREAEAAL 110 Query: 207 ESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVT 263 L P+ + ++ G LL D P+F T Sbjct: 111 ARALAAPQTFETLARELSNCPSAAVGGNLGQLLRGDSVPEFDAAVFDTPELGVLPRLVNT 170 Query: 264 QKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + G + I + A+ A ++A K +YV L S A I Sbjct: 171 RFGFHIVRIERREPGDPVPFDAVAADIAAFLAERVRHKAIQQYVTILASRARIE 224 >gi|154253607|ref|YP_001414431.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Parvibaculum lavamentivorans DS-1] gi|154157557|gb|ABS64774.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Parvibaculum lavamentivorans DS-1] Length = 631 Score = 65.5 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 29/395 (7%), Positives = 78/395 (19%), Gaps = 86/395 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI----TDGDI 56 M + + S ++ + + + F + I + + + I ++ Sbjct: 1 MLDSLRRNASGWVAKVLIGLLALSFAVWGIADIFTGFGGDT-VAEVGDQKIDAATYQVEL 59 Query: 57 SKRIALLKL---------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + Q +++ A+ LI G+ V Sbjct: 60 RNEMNQFSQRLGQPLSLDQARQFGIDRAALSRLISLAALDGAASDLGLAVGDEAVGIDIT 119 Query: 108 QHAR----NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV--------------- 148 + F L + GI + F + V+ Sbjct: 120 TDPNLQGPFGRFDRDLFRQSLQQNGISEERFIEQRRRAMSRKQVIEVIQVGVAAPEALIE 179 Query: 149 ------------------KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS---- 186 ++ E + + + + Sbjct: 180 MVSRFQEETRVAGYVILPQSLVGEIADPDEETVQKFYEAGASAFTLPETRDFSIMVLEPE 239 Query: 187 -----IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA--SKIHDVSIG------- 232 + ++ Q ++R + + R + + + G Sbjct: 240 DVTRTMAVSEEDLQAAYEQRRGEYDVPERRDVHQITFASEEEANEALTKLRGGENVETVV 299 Query: 233 ----------KAQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + D+ + P G + + Sbjct: 300 KGLGLTMKDVDLGKVSRDDMLSPELADAAFSLEGTGYSEPVRGPLGWSILHVTGIEPGKP 359 Query: 281 --EIALKAYLSAQNTPTKIEKH---EAEYVKKLRS 310 +K L A ++ R+ Sbjct: 360 STYEDVKEELRAAIELELARDQIYDIQNTIEDARA 394 >gi|240142444|ref|YP_002966954.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium extorquens AM1] gi|240012388|gb|ACS43613.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium extorquens AM1] Length = 266 Score = 65.5 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 27/88 (30%), Gaps = 4/88 (4%) Query: 212 LPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269 + + +S + G + L + P+F + S + P +Q G Sbjct: 154 GERFEDVARSVSSDRSTVPAGGDLGWFLRDRMVPEFGTAVAALSPGALSEPVRSQFGWHL 213 Query: 270 IAICDKRD--LGGEIALKAYLSAQNTPT 295 I + + R + + AQ Sbjct: 214 IRLDETRPQTIPPYENDAQRVRAQLFQK 241 >gi|33597580|ref|NP_885223.1| peptidyl-prolyl cis-trans isomerase D [Bordetella parapertussis 12822] gi|33574008|emb|CAE38331.1| peptidyl-prolyl cis-trans isomerase D [Bordetella parapertussis] Length = 671 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 29/241 (12%), Positives = 69/241 (28%), Gaps = 22/241 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T +++L+ ++ F +V + Y S+ T+ G+ +T + + Sbjct: 21 MFEIIRTH-RRWMQLILLLLIVPSFMLVGVQGYDSFINREPELATVAGQPVTRSEFDQAH 79 Query: 61 ALLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDS---NTVNY 104 Q + + + +LI + L +G + Sbjct: 80 RNQLEQLRQRLGSQFDPAMIDTPAMREQLLNQLIDQRLLAVVAADNGFSVSDGTLRNTIA 139 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-----NDFMLKYGNL 159 Q N S E + L QG+ F+ L V+ + Sbjct: 140 AIPQVQDNGRFSPERYRQVLAAQGMSPTSFEAGLRRDLAVARVLDPISQSASVPAEVARS 199 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 ++ ++ R + P + Q++++ E+ + + Sbjct: 200 VEAALTQRRTVQLRQFAASDFRAKVTVSPQDIQAWYDANQEQLRVPEQVQAQYLVLDEAA 259 Query: 220 E 220 Sbjct: 260 A 260 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 23/243 (9%), Positives = 63/243 (25%), Gaps = 11/243 (4%) Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + + E+ +S + Q A + + S + N Sbjct: 181 RVLDPISQSASVPAEVARSVEAALTQRRTVQLRQFAASDFRAKVTVSPQDIQAWYDANQE 240 Query: 135 KQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + Q +V + + +I + ++ K+ + R I Sbjct: 241 QLRVPEQVQAQYLVLDEAAATEGVQVKDEDIASYYEQNKSRFGQPERRRVSHIMISIPPG 300 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQFQ 247 ++ + A+E + D + A G + P Q Sbjct: 301 ASEEARKAAAAKAQEIAAQAAADPAGFAELARKNSQDTGSAAQGGDLGWAPLP--APLQQ 358 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYV 305 +++ + T + + D + + +K + ++ A+ Sbjct: 359 AAQALAKDQVSGVVDTPTAFHILKVTDFQPGSVKPLSEVKDEVVSEIRKQLASARFADMA 418 Query: 306 KKL 308 + Sbjct: 419 TDM 421 >gi|33601983|ref|NP_889543.1| peptidyl-prolyl cis-trans isomerase D [Bordetella bronchiseptica RB50] gi|33576421|emb|CAE33499.1| peptidyl-prolyl cis-trans isomerase D [Bordetella bronchiseptica RB50] Length = 671 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 29/241 (12%), Positives = 69/241 (28%), Gaps = 22/241 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T +++L+ ++ F +V + Y S+ T+ G+ +T + + Sbjct: 21 MFEIIRTH-RRWMQLILLLLIVPSFMLVGVQGYDSFINREPELATVAGQPVTRSEFDQAH 79 Query: 61 ALLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDS---NTVNY 104 Q + + + +LI + L +G + Sbjct: 80 RNQLEQLRQRLGSQFDPAMIDTPAMREQLLNQLIDQRLLAVVAADNGFSVSDGTLRNTIA 139 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-----NDFMLKYGNL 159 Q N S E + L QG+ F+ L V+ + Sbjct: 140 AIPQVQDNGRFSPERYRQVLAAQGMSPTSFEAGLRRDLAVARVLDPISQSASVPAEVARS 199 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 ++ ++ R + P + Q++++ E+ + + Sbjct: 200 VEAALTQRRTVQLRQFAASDFRAKVTVSPQDIQAWYDANQEQLRVPEQVQAQYLVLDEAA 259 Query: 220 E 220 Sbjct: 260 A 260 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 23/243 (9%), Positives = 63/243 (25%), Gaps = 11/243 (4%) Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + + E+ +S + Q A + + S + N Sbjct: 181 RVLDPISQSASVPAEVARSVEAALTQRRTVQLRQFAASDFRAKVTVSPQDIQAWYDANQE 240 Query: 135 KQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + Q +V + + +I + ++ K+ + R I Sbjct: 241 QLRVPEQVQAQYLVLDEAAATEGVQVKDEDIASYYEQNKSRFGQPERRRVSHIMISIPPG 300 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQFQ 247 ++ + A+E + D + A G + P Q Sbjct: 301 ASEEARKAAAAKAQEIAAQAAADPAGFAELARKNSQDTGSAAQGGDLGWAPLP--APLQQ 358 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYV 305 +++ + T + + D + + +K + ++ A+ Sbjct: 359 AAQALAKDQVSGVVDTPTAFHILKVTDFQPGSVKPLAEVKDEVVSEIRKQLASARFADMA 418 Query: 306 KKL 308 + Sbjct: 419 TDM 421 >gi|253581345|ref|ZP_04858571.1| peptidylprolyl isomerase [Fusobacterium varium ATCC 27725] gi|251836709|gb|EES65243.1| peptidylprolyl isomerase [Fusobacterium varium ATCC 27725] Length = 584 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 74/295 (25%), Gaps = 31/295 (10%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 + + EVIT D+ + + + + + K E I E K Sbjct: 193 KPLAEVKNEVIT--DLKQTKGIEEYILLLNKARKEMKLENISEEYKAYVERNEMEEDGFA 250 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI----------------- 143 N + N + + LA +I Sbjct: 251 ISNVEMAKRTLNNLFITNGDREKARELSKEYYKAQIKLAKIAIERGITVDETLPLDYKFE 310 Query: 144 -WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + + + ++ +K K + + + + + K Sbjct: 311 EYKKGLFENIKNSLNPTDAQLKEYFEKNKLVYDTFPSADSYIAILKVDPSAEDKAAAKTR 370 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTNP 260 + L +K + + G + + D+ FQ + + P Sbjct: 371 AEELLKTLTPKNFAEVAKKNSDGPSSPNGGDLGWFSKKDMVEPFQKAVFAGEVGKIYPEP 430 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T G I I D++ + +A S KI + A I Sbjct: 431 VETIFGQHLIYIEDRK----DDEERAKASHILIVPKISEATLNT-----KKAEIE 476 >gi|240851485|ref|ZP_04752236.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus minor 202] gi|240310003|gb|EER48295.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus minor 202] Length = 624 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 25/283 (8%), Positives = 76/283 (26%), Gaps = 23/283 (8%) Query: 53 DGDISKRIALLKLQKINGELEKIAV---------------QELIVETLKKQEIEKSGITF 97 +I + K + L + A+ + +I +++ I S Sbjct: 117 KSEIVHDANFQQNGKFDNNLYQQALRNAGLTPDGYAAVVREGMIFSQIEEGIINTSFDLP 176 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH---FKQYLAIQSIWPDVVKNDFML 154 + R+ L+ + Q + F Q + P+ ++++ Sbjct: 177 AQQEALAKLLFQKRDVRLATYSLADEAKNQTVSPEELQSFYDAHKKQLLTPETFTVEYLV 236 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 ++E + T + + N Q + + Sbjct: 237 -LTPKDVEKRIQITDEQIATYYDKNKAQFVTKGEANLAHIQVANEAEANAIAQQLNNGAD 295 Query: 215 DCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 ++ ++ + G + F+N + + P I + Sbjct: 296 FAALAKEKSTDKLSAAQGGNLGWAKAGTFPQAFENAANQLQVGQVSQPIKIDNAYHIIKV 355 Query: 273 CDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 D++ ++ +K ++ + + + + ++A Sbjct: 356 IDRKAENVIPLAQVKDKITETIRKELLASEYSTVARDMANSAF 398 Score = 39.7 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 30/238 (12%), Positives = 68/238 (28%), Gaps = 20/238 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI---TDGDIS 57 M K + F L+ V + +NGE I T D Sbjct: 1 MIEKWHDRTNSL--GFKIVFTLVSLSFVLGGIGSGLVATDDSAVKVNGEGISQRTFTDAK 58 Query: 58 KRIALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 R + + G E + + LI + L +Q + + + + Sbjct: 59 NRQQNILYSQKGGEAWDLLDKPEYAREFNQSVLNSLINDELLRQYAKSLKLDVGVDQIKS 118 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 V A D + + Y A + ++ + N ++P Sbjct: 119 EIVHDANFQQNGKFDNNLYQQALRNAGLTPDGYAA--VVREGMIFSQIEEGIINTSFDLP 176 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 A ++ + + ++ +R +S+ D ++ + + +L ++ Sbjct: 177 AQQEALAKLLFQKRDVRLATYSLADEAKNQTVSPEELQSFYDAHKKQLLTPETFTVEY 234 >gi|305666291|ref|YP_003862578.1| peptidylprolyl cis-trans isomerase [Maribacter sp. HTCC2170] gi|88708283|gb|EAR00520.1| peptidylprolyl cis-trans isomerase [Maribacter sp. HTCC2170] Length = 706 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 26/255 (10%), Positives = 58/255 (22%), Gaps = 16/255 (6%) Query: 51 ITDGDISKRIALLKLQKINGELE----------------KIAVQELIVETLKKQEIEKSG 94 IT +I I K E E I E + Sbjct: 215 ITKSEIQSYINSHKEDFKQEEARDIQYVYFEEKASAEDENAVKDETIKLLEDTVEYREQT 274 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 D+ T A ++ + K + + + Sbjct: 275 DKMDTITGFRTTSDIADFLDRKSDIKFDTIYKAKRDLSTVFADTLVTLKMGETYGPYRDG 334 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + + + + + + + + E++ + Sbjct: 335 DFFKVSKMVNKKTNGSAKASHILIKWKGAERAEATVTRSKEEAEEMAKGILAETKKKDAV 394 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274 + + G Y E + +F + + ++ T + T G + I D Sbjct: 395 FVELARDNSEGPSAPNGGDLGYFQEGRMVAEFNDFVFNNKVGTIDLVETALGYHIVKIDD 454 Query: 275 KRDLGGEIALKAYLS 289 K D+ L + Sbjct: 455 KEDIYQIATLAREIE 469 >gi|292493615|ref|YP_003529054.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus halophilus Nc4] gi|291582210|gb|ADE16667.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus halophilus Nc4] Length = 320 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 28/288 (9%), Positives = 76/288 (26%), Gaps = 37/288 (12%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK-----IAVQELIVETLKKQEIEK 92 ++ +T D +A + Q G L + +L V + QE + Sbjct: 31 SGEKVLIQQGEITVTQADFDAELAEIPAQHHAGILASGKRIHQLLDKLFVYRVLAQETRE 90 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 G+ D + G + D Q+ Sbjct: 91 LGLDKDPLLRQQIALAVEEKLGKARLKHLREQALAASPDFEALARERYQANQEQY----- 145 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 + + +L + + + ++++ + + Sbjct: 146 --------------------QLPEQVKVSHILIKAEERSEEEARQLAEKVRKLALAEEK- 184 Query: 213 PKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEY 269 +++ + + G ++ F+ K N + ++ G Sbjct: 185 -PFAELAVEYSEDPSVERNQGDLGFIARGKTVKPFEEAAFALKQPGNISPVVKSRFGFHI 243 Query: 270 IAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 I + +++ +K L + T + K ++ ++R+ I Sbjct: 244 IRLEERQPAQVQPFDQVKEKLVQEAKETYLNKVVQTHLNQIRNAEGIQ 291 >gi|88813286|ref|ZP_01128525.1| peptidyl-prolyl cis-trans isomerase C [Nitrococcus mobilis Nb-231] gi|88789458|gb|EAR20586.1| peptidyl-prolyl cis-trans isomerase C [Nitrococcus mobilis Nb-231] Length = 93 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 26/80 (32%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +++ + +E + + G + + P+F + + N Sbjct: 14 EQQCLELKERIDNGEDFAAIAREHSKCPSGQKGGDLGEFTQGQMVPEFDKVVFNDELNKV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++ D Sbjct: 74 HGPVRTQFGYHLLEVLERTD 93 >gi|32475387|ref|NP_868381.1| peptidyl-prolyl cis-trans isomerase C2 [Rhodopirellula baltica SH 1] gi|32445928|emb|CAD78659.1| peptidyl-prolyl cis-trans isomerase C2 [Rhodopirellula baltica SH 1] gi|327537999|gb|EGF24693.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopirellula baltica WH47] Length = 93 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 1/80 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 ++ +D ++ + +F+S S G + +F + + Sbjct: 12 ETEEACQDLKDQIEKGQDFGAIAAEFSSCPSGKSGGALGTFSPGQMVKEFDEVVFSGELG 71 Query: 256 NTTNPYVTQKGVEYIAICDK 275 P TQ G I I + Sbjct: 72 KVHGPVKTQFGYHLIEITQR 91 >gi|254507758|ref|ZP_05119889.1| peptidyl-prolyl cis-trans isomerse D [Vibrio parahaemolyticus 16] gi|219549283|gb|EED26277.1| peptidyl-prolyl cis-trans isomerse D [Vibrio parahaemolyticus 16] Length = 364 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 33/352 (9%), Positives = 82/352 (23%), Gaps = 89/352 (25%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + SY + + I G+ + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFVFAGVGSYIVGGAGNT-AAKVGNVEIDRGEFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q G+ V Sbjct: 60 QNERNRMQAQLGDYFSNLLADPSYVESFRKSVLDRMVNDLLLEQHAASLGLRVSDAQVRT 119 Query: 105 FFVQHARNTGLSAEDFSSFL---DKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 V+ + D + + G F +YL + ++ Sbjct: 120 MIVEMPQFQVDGKFDQEIYQSSLRRAGFTPESFAEYLRRDLVRNQLLTAIQASDFSLPAE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 DF K + EI ++ R ++ + Sbjct: 180 VEAQAKLLTQTREVQTLSLPLDDFAAKVELSDDEIQGYYEQNSERYTRPEQVKVAYIELS 239 Query: 189 DNKLQNQGFV---------------------------------QKRIKDAEESRLRLPKD 215 KL++ V Q + + + Sbjct: 240 AQKLKDAITVSDEDAKKYFEEHLDKYSSEEQRRVSHILVEGDDQAKAQAILDELNAGTDF 299 Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQ 264 E+ + G ++ + P F+ K+ + T + Sbjct: 300 AALAEEKSDDFGSASEGGSLGWIERDVMDPAFEEAAFALKNVGDVTGLVKSD 351 >gi|254480567|ref|ZP_05093814.1| SurA N-terminal domain family protein [marine gamma proteobacterium HTCC2148] gi|214039150|gb|EEB79810.1| SurA N-terminal domain family protein [marine gamma proteobacterium HTCC2148] Length = 626 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 27/199 (13%), Positives = 61/199 (30%), Gaps = 6/199 (3%) Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + F A++ + ++ + F E I ++ + + Sbjct: 207 SDPQIQQYYADNSDSFLSEEAVELDYIELRSDSFREAVE--EQMIVDAYEQEIANSQYQT 264 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 R ++ Q+R+ DA+ ++ + I S G + Sbjct: 265 ENRVSHILFEQGGDESDSSYQERLSDAQSRLAAGEAFAAVAQELSDDIGSASSGGDLGFT 324 Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTP 294 + + + + N + P VT G I + ++R + L+A L Q Sbjct: 325 SGDAFPAEMEEAIAELELNGISAPVVTDAGTHIILLTERRSGEAPPLEELRAGLEEQLAM 384 Query: 295 TKIEKHEAEYVKKLRSNAI 313 ++ V+ L+ A Sbjct: 385 SEARVELLRMVETLKDLAF 403 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 42/139 (30%), Gaps = 14/139 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + +++ F I S S +NGE IT ++ + + Sbjct: 1 MLQDIRKNSQGTLAKIIVGIIVVAFAGFGIESILLGGGGSA-VAEVNGEEITPQELQQAV 59 Query: 61 ALLKLQ-------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 K Q + L + A+Q LI L Q + G+T V Sbjct: 60 NNQKRQLISMMGENLDPAMLDDQLLSQQAMQTLISRKLLVQSADDMGLTVSDTQVGALIG 119 Query: 108 QHARNTGLSAEDFSSFLDK 126 + + + Sbjct: 120 SMEQFQLDGQFSPELYRAR 138 >gi|33592803|ref|NP_880447.1| peptidyl-prolyl cis-trans isomerase D [Bordetella pertussis Tohama I] gi|33572451|emb|CAE42019.1| peptidyl-prolyl cis-trans isomerase D [Bordetella pertussis Tohama I] gi|332382216|gb|AEE67063.1| peptidyl-prolyl cis-trans isomerase D [Bordetella pertussis CS] Length = 651 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 29/241 (12%), Positives = 69/241 (28%), Gaps = 22/241 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T +++L+ ++ F +V + Y S+ T+ G+ +T + + Sbjct: 1 MFEIIRTH-RRWMQLILLLLIVPSFMLVGVQGYDSFINREPELATVAGQPVTRSEFDQAH 59 Query: 61 ALLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDS---NTVNY 104 Q + + + +LI + L +G + Sbjct: 60 RNQLEQLRQRLGSQFDPAMIDTPAMREQLLNQLIDQRLLAVVAADNGFSVSDGTLRNTIA 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-----NDFMLKYGNL 159 Q N S E + L QG+ F+ L V+ + Sbjct: 120 AIPQVQDNGRFSPERYRQVLAAQGMSPTSFEAGLRRDLAVARVLDPISQSASVPAEVARS 179 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 ++ ++ R + P + Q++++ E+ + + Sbjct: 180 VEAALTQRRTVQLRQFAASDFRAKVTVSPQDIQAWYDANQEQLRVPEQVQAQYLVLDEAA 239 Query: 220 E 220 Sbjct: 240 A 240 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 23/243 (9%), Positives = 62/243 (25%), Gaps = 11/243 (4%) Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + + E+ +S + Q A + + S + N Sbjct: 161 RVLDPISQSASVPAEVARSVEAALTQRRTVQLRQFAASDFRAKVTVSPQDIQAWYDANQE 220 Query: 135 KQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + Q +V + + +I + ++ K+ + R I Sbjct: 221 QLRVPEQVQAQYLVLDEAAATEGVQVKDEDIASYYEQNKSRFGQPERRRVSHIMISIPPG 280 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQFQ 247 ++ + A+E + D + A G + P Q Sbjct: 281 ASEEARKAAAAKAQEIAAQAAADPAGFAELARKNSQDTGSAGQGGDLGWAPLP--APLQQ 338 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYV 305 +++ + T + + D + + +K + + A+ Sbjct: 339 AAQALAKDQVSGVVDTPTAFHILKVTDFQPGSVKPLAEVKDEVVGEIRKQLASARFADMA 398 Query: 306 KKL 308 + Sbjct: 399 TDM 401 >gi|187478286|ref|YP_786310.1| peptidyl-prolyl cis-trans isomerase [Bordetella avium 197N] gi|115422872|emb|CAJ49400.1| peptidyl-prolyl cis-trans isomerase [Bordetella avium 197N] Length = 93 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 27/81 (33%), Gaps = 1/81 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256 + R ++ + + + +S G ++ +F ++ + N Sbjct: 13 TEARAQELKTAIQNGADFAEVARENSSCPSARQGGDLGTFGPGEMVREFDQVVFSAPVNE 72 Query: 257 TTNPYVTQKGVEYIAICDKRD 277 P TQ G + + +RD Sbjct: 73 VQGPVKTQFGYHLVEVTSRRD 93 >gi|221066302|ref|ZP_03542407.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas testosteroni KF-1] gi|220711325|gb|EED66693.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas testosteroni KF-1] Length = 263 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 97/296 (32%), Gaps = 48/296 (16%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIV 82 ++ + + + S++ +NG+ + ++ A ++ E++K+ E+I Sbjct: 11 IVGATVLGFAALSASAQNVAIVNGKAVPMARVNALKAQIEASGQPVAPEMDKMIKDEVIA 70 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + QE + G+ +A Q+ Sbjct: 71 REVFMQEANRRGLAASEAYKQQ-------------------------------MDMARQT 99 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + + DF K + E A K + + + +++ + K Sbjct: 100 VLIRALFEDFQKKNPVTDAEAKAEYDKFVEANGGKEYKASHILVESEDRAKAIIAEVKAG 159 Query: 203 KDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN- 259 K E+ +K + G + ++ P+F + L+K + T+ Sbjct: 160 KKFEDI----------AKKESKDPGSGARGGDLDWANPNNYVPEFTEALIKLKKGEMTDA 209 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 P +Q G I + D+R E+ + Q T ++ ++ +LR +A I Sbjct: 210 PVKSQFGWHIIRMDDERQA--EMPKFEDVKPQITQQLQQQKLQQFQDQLRKSAKIQ 263 >gi|254564031|ref|YP_003071126.1| peptidyl-prolyl cis-trans isomerse D [Methylobacterium extorquens DM4] gi|254271309|emb|CAX27321.1| putative peptidyl-prolyl cis-trans isomerse D [Methylobacterium extorquens DM4] Length = 634 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 33/403 (8%), Positives = 88/403 (21%), Gaps = 90/403 (22%) Query: 1 MTSKVFTSLSDFI-KLLTTYFVLIIFCIVPIVSYKSW--AMSSRIRTTINGEVITDGDIS 57 M + ++ ++ K++ + + V I + + SS T+ I+ ++ Sbjct: 1 MLQSIRSASQHWLGKVVLSVIFTFLIAGVAIFGVEEFFRGGSSTAVATVGKTPISAEEVR 60 Query: 58 KRIALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + LE+ + +LI E Q+ G+ TV Sbjct: 61 TAYQNQLQRYQAQLKRTLTPDQARAMGLERQVLAQLITEAALDQKTTDLGLAVSDATVLR 120 Query: 105 FFVQHARNTGLS-----------------AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + E + I + + P Sbjct: 121 AIQDEPSFKNANGSFDRALFFQTLQRAGLNEAMFVREQRSVIARLQLADAIVAEMPVPQA 180 Query: 148 VKNDFML-------------------KYGNLEMEIPANKQKMKNITVREYLIR------- 181 ++ + E + + R R Sbjct: 181 IREAVHRYSTERRDAAVLTLAPSAAGEIPAPTDEALNAYYENNKASFRAPEYRSLNLLVL 240 Query: 182 ------------------TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + +Q+ E + E Sbjct: 241 DPAALAKPDEVSDDEARKVYEANPGRFGKAERRTIQQISFPDEATAAEARAKIESGETPF 300 Query: 224 SKIHDVSIGK-----AQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 + + +++L Q + P + G + + Sbjct: 301 ETVAADRGLDPKQLDLGTMTKAELFDPAVGNAAFALEQGKVSEPVKGRFGTVLLRVTAIE 360 Query: 277 D--LGGEIALKAYLSAQNTPTKIE----KHEAEYVKKLRSNAI 313 + +K + + ++ + ++ R++A Sbjct: 361 PGTVKPFDEVKDEIRKEIALKRVRDGGFDKVQDAIEDARASAK 403 >gi|225075250|ref|ZP_03718449.1| hypothetical protein NEIFLAOT_00253 [Neisseria flavescens NRL30031/H210] gi|224953425|gb|EEG34634.1| hypothetical protein NEIFLAOT_00253 [Neisseria flavescens NRL30031/H210] Length = 617 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 28/260 (10%), Positives = 63/260 (24%), Gaps = 11/260 (4%) Query: 57 SKRIALLKLQKINGELEKIAVQ-ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 + + ++ Q L + L+ + +Q I + T + + A + Sbjct: 132 DQFVEDIREQFQLQNLLNLVQNGALVSDAQARQLINLTQATRTIRSFTFSPEAFAAQVKV 191 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + + + D K E+ Sbjct: 192 DDAALQKYYEAHKKDYLIPQAVKLEYVALNI---KDLADKQNVSAEEVQKAYDSKSVDLS 248 Query: 176 REYLIRTVLFSIPDNKLQ--NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IG 232 I + + N + N + K A E + K++ + + G Sbjct: 249 PRAEIAHIFIPVMPNGDEASNAEIKAEVDKMAAELKAHPDAFAELAAKYSKDLSSSNKGG 308 Query: 233 KAQYLLE----SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 YL + + + ++ + G I + + KA + Sbjct: 309 NLGYLSKSGGSGFGPEFDKAAFALGKGEVSDTVKSSLGYHVIKVLNVEAEPTLEQAKARI 368 Query: 289 SAQNTPTKIEKHEAEYVKKL 308 A K +KL Sbjct: 369 EAALKLKKAASAFNAAKEKL 388 >gi|311109018|ref|YP_003981871.1| peptidyl-prolyl cis-trans isomerase C [Achromobacter xylosoxidans A8] gi|310763707|gb|ADP19156.1| peptidyl-prolyl cis-trans isomerase C [Achromobacter xylosoxidans A8] gi|317405706|gb|EFV86002.1| peptidyl-prolyl cis-trans isomerase C [Achromobacter xylosoxidans C54] Length = 93 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 8/81 (9%), Positives = 25/81 (30%), Gaps = 1/81 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256 + + + + + ++ +S G + +F ++ + Sbjct: 13 TEAKANELKTAIENGADFAQLAKENSSCPSSRDGGNLGTFGPGQMVKEFDTVVFSAPVGE 72 Query: 257 TTNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 73 VQGPVKTQFGYHLVEVTSRKD 93 >gi|294669050|ref|ZP_06734136.1| putative PPIC-type PPIASE domain protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309042|gb|EFE50285.1| putative PPIC-type PPIASE domain protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 291 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 89/297 (29%), Gaps = 23/297 (7%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET 84 F I++ S ++ + T+NG I G+I ++I L++ +L+ T Sbjct: 6 FLPALIMALFSGSLMAETLLTVNGNKIDSGEIDRQIKLIRQDNPQIPDSPELRNQLLSNT 65 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 + + + + F + E + + ++ L IQ+ Sbjct: 66 VTRMLVNQEARRLKLEQGQEFKTASENARKSAKEQGADKHADFKQQWDDYQAALLIQAFV 125 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 ++K + E+ ++ + E + +L + Q ++ + Sbjct: 126 SHIIK---TNPISDQEIRRAYDESRKYYQGSSEVQLGEILTPNKADAEQAIKDLKAK--- 179 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQ------YLLESDLHPQFQNLLKKSQNNT- 257 + K+++ G LE + P + + + Sbjct: 180 --------KPFTDTARKYSADPAVKQTGGINPEFDALKDLEQSVPPIYAAVKDLKKGQFT 231 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + P V I DKR L + + ++ + V L A I Sbjct: 232 STPVVGNGVFGIFYIHDKRPLQL--PPFEQVQNNIRRSLQQQKISRAVDALYQKATI 286 >gi|213423790|ref|ZP_03356770.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 119 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 11/114 (9%), Positives = 34/114 (29%), Gaps = 7/114 (6%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQK 265 E +++ + G+ + +L F + + P + Sbjct: 4 EEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGV 63 Query: 266 GVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 G + + D R + ++ + +P ++ ++++ A I Sbjct: 64 GFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMNDQQARLKLEEI--AADIK 115 >gi|168049559|ref|XP_001777230.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671458|gb|EDQ58010.1| predicted protein [Physcomitrella patens subsp. patens] Length = 144 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 28/103 (27%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R +L + +++ D+ + + +++ G Sbjct: 43 TYVKARHILCEKQGKINEAYKKLKEGWLDSGDKVP-PAEFAKLAAEYSECPSGKKGGDLG 101 Query: 236 YLLESDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + P + + P+ + G I +++ Sbjct: 102 WFPRGKMAGPFQEVAFNTPPGVLSAPFKSTHGYHIILAEGRKN 144 >gi|322418770|ref|YP_004197993.1| Dcu family anaerobic c4-dicarboxylate antiporter [Geobacter sp. M18] gi|320125157|gb|ADW12717.1| anaerobic c4-dicarboxylate antiporter, Dcu family [Geobacter sp. M18] Length = 546 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 9/86 (10%), Positives = 24/86 (27%), Gaps = 2/86 (2%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL--LKKSQNN 256 + K + + + + G + + + P+F+ K + Sbjct: 282 ETEAKQVLAQLKSGGSFSDVARQCSIDATAGTGGDLGWQAKGKMLPEFEKACAKLKKPGD 341 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEI 282 T + G + +KR + Sbjct: 342 LTEVIKSPFGYHVVKFDEKRPAQNKE 367 >gi|313675957|ref|YP_004053953.1| ppic-type peptidyl-prolyl cis-trans isomerase [Marivirga tractuosa DSM 4126] gi|312942655|gb|ADR21845.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marivirga tractuosa DSM 4126] Length = 713 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 47/135 (34%), Gaps = 4/135 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLE 239 + P ++ +K +K E K + + + G + Sbjct: 240 HIMKRFPPQASSEDSLQTEKELKKIYEQLNSGENWFILATKESEDLSTKDNGGSLPWFGA 299 Query: 240 SDLHPQFQNLLKK--SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 L + + + + + + P + G + + DKR +G +++ LS + + Sbjct: 300 GRLPASLETVAFELEEKGDISKPVESPYGWHILKLEDKRGVGSLESMEESLSRRVQRDQR 359 Query: 298 EKHEA-EYVKKLRSN 311 + + E +KKL+ Sbjct: 360 SELKEVEVIKKLKEE 374 >gi|301631501|ref|XP_002944836.1| PREDICTED: probable parvulin-type peptidyl-prolyl cis-trans isomerase-like [Xenopus (Silurana) tropicalis] Length = 262 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 95/305 (31%), Gaps = 48/305 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKINGELE 73 + + + + + +NG+ + ++ K+ + I E+E Sbjct: 1 MKQKLLSGLVATAVWGAVALPVAAQN-LAIVNGKPVPKERAELLKQQVERSGRPITPEIE 59 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +E+I + QE +K G+ + N Sbjct: 60 GQIKEEVIAREIFLQEAKKRGLEASKDFKNQ----------------------------- 90 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 LA Q+I + D+ K + EI A K + + + +++ + Sbjct: 91 --MELARQTILIRELFADYQKKNPVSDAEIQAEYDKFVASNSGKEYKVSHILVEKEDEAK 148 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLK 251 + K+ K + +K + G + + +F + +LK Sbjct: 149 SIIASIKQ---------GSAKFEDIAKKQSKDPGSGARGGDLDWANPNSYVSEFTEAMLK 199 Query: 252 KSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + T P +Q G I + D+R + + Q T ++ ++ + LR+ Sbjct: 200 LKKGEMTAEPVKSQFGWHVIRLDDERQAQL--PKQEEVKPQITQQLQQQKLGQFQENLRT 257 Query: 311 NAIIH 315 A + Sbjct: 258 KAKVE 262 >gi|13488227|ref|NP_085712.1| hypothetical protein mlr9159 [Mesorhizobium loti MAFF303099] gi|14027961|dbj|BAB54553.1| mlr9159 [Mesorhizobium loti MAFF303099] Length = 360 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 26/309 (8%), Positives = 69/309 (22%), Gaps = 30/309 (9%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 F ++ + + VP+ + S I +I E T + + Q Sbjct: 3 FKRVYAAALLSLPLTTVPLTALSS--DDDPIVLSIGHERWTASQFQRLMLDTPPQVKEEA 60 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + ++ +H + + + Sbjct: 61 AAE-------------PDVFAKRYADMHLLAQLAESRHLDQDADIRQRLAWVREGVMANA 107 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 Y Q +V + + + V Y ++ Sbjct: 108 AKNDLYQRTQVGNEEVRR--------YYDEHVSDFVDYTLQHLVIGYHGAESARNVGRKD 159 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL-LESDLHPQFQNLL 250 + + + ++ G + L Q + Sbjct: 160 MAEDDARAEAEQLRKQLLEGENFAELVQCYSYDDDSKSDGGLLPETASRNLLPEIAQGIA 219 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-----AEYV 305 +N ++P T G + + KR + ++ +++ + Sbjct: 220 DLKENEISHPIKTLYGYHLVRVI-KRSDNSFEDARRHIVNLLKSQIVDQQIDAIIWRRRL 278 Query: 306 KKLRSNAII 314 + + A I Sbjct: 279 SDVFAAAHI 287 >gi|167836273|ref|ZP_02463156.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia thailandensis MSMB43] Length = 644 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 21/273 (7%), Positives = 63/273 (23%), Gaps = 22/273 (8%) Query: 53 DGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 D + +L +Q + ++ L ++ + + + + R Sbjct: 133 SFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVASAFTPKSIARRLTELAEQQR 192 Query: 112 NTGLSAEDFSSFLDKQ---------GIGDNHFKQYLAIQSIWPDVV--KNDFMLKYGNLE 160 + + K + + +V + + + Sbjct: 193 EVQPMVLKPADYAAKVQPTDAQISAYYDAHKQAFATRETATIQYLVYSQAAAVAAAQPSD 252 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 ++I + +R I K + AE+ + ++ Sbjct: 253 IDIKKYYDDNIAHYRTDAQVRVSHIFIAAAKDASAADKAAAKAKAEQLLAEVKAHPDQFA 312 Query: 221 KFA-----SKIHDVSIGKAQYLLESDLHPQFQNLLKK---SQNNTTNPYVTQKGVEYIAI 272 + A G ++ ++ + G + Sbjct: 313 QIAEKNSQDAPSAAKGGDLGFITRGSTAGGAAFDDAAFALKKDEVSGVVQGDFGFHILKA 372 Query: 273 CDKRDLGGE--IALKAYLSAQNTPTKIEKHEAE 303 D + + +K ++A K A+ Sbjct: 373 TDVKPAVVKPLAEVKDSIAADLKQQFAAKAFAD 405 Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 21/236 (8%), Positives = 65/236 (27%), Gaps = 18/236 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIF---CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + +L+ + +LI+ IV I ++ + + +NG IT + + Sbjct: 1 MLDFFRNHQRLMMFFLLLIVLPGLGIVGIQGFRGFFDENANVAAVNGHKITRAEFDGMLR 60 Query: 62 LLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF-- 106 Q E + + LI + E ++ +T V Sbjct: 61 QQVDQARQMLGAQFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLTASDGAVRQTLLS 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + F + Q + + + ++ + Sbjct: 121 DPVIASLKKPDGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVASAFTPKSI 180 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 +++ + ++ ++ ++ D + Q + + + ++ Sbjct: 181 ARRLTELAEQQREVQPMVLKPADYAAKVQPTDAQISAYYDAHKQAFATRETATIQY 236 >gi|270156946|ref|ZP_06185603.1| peptidyl prolyl cis-trans isomerase D-like protein [Legionella longbeachae D-4968] gi|289164629|ref|YP_003454767.1| peptidyl-prolyl cis-trans isomerase D [Legionella longbeachae NSW150] gi|269988971|gb|EEZ95225.1| peptidyl prolyl cis-trans isomerase D-like protein [Legionella longbeachae D-4968] gi|288857802|emb|CBJ11647.1| putative peptidyl-prolyl cis-trans isomerase D [Legionella longbeachae NSW150] Length = 624 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 30/267 (11%), Positives = 76/267 (28%), Gaps = 18/267 (6%) Query: 52 TDGDISKRIALLKLQKINGELE---KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 T + L A+ + I + + V Sbjct: 141 TQSSFQNEVKQGMLLNQQRFAFMGSSFALPDEIDRFVSLYMQSRDYEYL--------IVP 192 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 +R + D F + + ++ +D K + ++ + Sbjct: 193 VSRFEKDVQISQDAITDYYNKHKREFMAPEKVSLDYVNLSMHDIKDKVNVSDDDVKRYYE 252 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + +N + + N+ ++K A + L L KD + + SK+ D Sbjct: 253 ENQNNYLTPARWHVAHILFAVPQGANKDELEKIQNKANSTYLLLQKDPKQFDHLVSKMSD 312 Query: 229 VSI-----GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-- 281 + G ++ + ++P T+ G E + D + + + Sbjct: 313 DKLSVADNGVLPWIAAGQNEYSKLLSHLTTPGQISSPEKTKHGYEIFKLIDYKPVSTKPL 372 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++A + Q + + +++L Sbjct: 373 SEVEASIKEQLVVEMAQTQYTQAMEQL 399 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 32/321 (9%), Positives = 78/321 (24%), Gaps = 24/321 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + + L + I F + + Y ++ + +N +T Sbjct: 1 MLQKLNERIQGVVAWLVVILIGITFTLFGVDYYLQSRQTTNAKVVVNDFPLTLQAFDTSY 60 Query: 61 ALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + + +L+ + ++I + Q K+G ++ N + + Sbjct: 61 RRARAMQDLSQLTAADEKKLQNQVLDQMINNEVLVQAARKNGFNVSADQANAAILSIPQF 120 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + F + + ++ Sbjct: 121 QEDGHFSAQKYQQALNAALFTQSSFQNEVKQGMLLNQQRFAFMGSSFALPDEIDRFVSLY 180 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + R+Y L ++ Q I D R K+ + I Sbjct: 181 MQSRDYEY---LIVPVSRFEKDVQISQDAITDYYNKHKREFMAPEKVSLDYVNLSMHDIK 237 Query: 233 KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ- 291 + + D+ ++ T I G + + Sbjct: 238 DKVNVSDDDVKRYYEENQNNYL--------TPARWHVAHILFAVPQGANKDELEKIQNKA 289 Query: 292 ----NTPTKIEKHEAEYVKKL 308 K K V K+ Sbjct: 290 NSTYLLLQKDPKQFDHLVSKM 310 >gi|228911670|ref|ZP_04075447.1| Foldase protein prsA 2 [Bacillus thuringiensis IBL 200] gi|228847994|gb|EEM92871.1| Foldase protein prsA 2 [Bacillus thuringiensis IBL 200] Length = 275 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 28/297 (9%), Positives = 82/297 (27%), Gaps = 48/297 (16%) Query: 27 IVPIVSYKSWAMSSRIRT-TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETL 85 + ++ + + + T + IT D++K + + K + +++E L Sbjct: 1 MSGLLLLSACGNTENVATSKVGN--ITQNDLNKELK--------NKYGKEVLSSMMIEQL 50 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + ++ ++ + G + + S L Q + + Sbjct: 51 LLNK-----YKVSNDEAQKKVDEYKKQMGENFKSTLSQLRFQNEDE-----FKEKMIKPQ 100 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 ++ E++ + +K+ ++ Sbjct: 101 IALEKAIKASITEKELKDYYKPTLKVSHI--------------------LVKDEKKAQEI 140 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHP----QFQNLLKKSQNNTTNP 260 ++ + ++ + G L + P + K + P Sbjct: 141 KDKLNNGGDFASLAKEHSEDPGSKEQGGDLGELDAVKMEPMDSKFKEATYKLEVGQISEP 200 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQN--TPTKIEKHEAEYVKKLRSNAIIH 315 + G I + DK++L K + + K + + + +K L + Sbjct: 201 VKSSFGYHIIKVTDKKELKPFDQEKDNIQKELETMRAKNPQWQQKLIKDLIKKENVQ 257 >gi|320106396|ref|YP_004181986.1| SurA domain-containing protein [Terriglobus saanensis SP1PR4] gi|319924917|gb|ADV81992.1| SurA domain protein [Terriglobus saanensis SP1PR4] Length = 240 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 19/172 (11%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-------RIRTTINGEVITDGDISKRIALLKLQ- 66 + +L+ F + + + RI +NG++I D+ + + KLQ Sbjct: 8 RVFAVALLLCFICRSMPAQTPAKPADPRGESVDRIIAIVNGQIILQSDLDEEVRFAKLQP 67 Query: 67 ---KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF--------FVQHARNTGL 115 L + A+ LI TL Q+ + G ++ A Sbjct: 68 YRLGAGKTLREQAMSRLIDRTLILQQQQGMGQAPITDAELDAAITDLRKDLPACAHAACE 127 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + E + FL G ++ I+ ++ F + +I Sbjct: 128 TDEGWIKFLAGVGFTPEEVRERWRIRLEVLRFIEQRFRAGIRISDAQIEEFY 179 >gi|260061697|ref|YP_003194777.1| peptidylprolyl cis-trans isomerase [Robiginitalea biformata HTCC2501] gi|88785829|gb|EAR16998.1| peptidylprolyl cis-trans isomerase [Robiginitalea biformata HTCC2501] Length = 706 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 34/268 (12%), Positives = 64/268 (23%), Gaps = 12/268 (4%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQ 88 I I I + + A E A + I E+L+ Sbjct: 207 SIPDSTISVSKEEIAAYIKENP---SEFKQEAARDLRYVYFEEKASAADETAIEESLRAL 263 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 ++ D ++ NT D + K L Q + Sbjct: 264 LEDEEEYREDLDST--VVNPGFLNTDDMLAFLDRNSDTKYDTIYRAKSELPTQWADTLMA 321 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ-------GFVQKR 201 + + M +L S + N ++ Sbjct: 322 LETGETFGPYRDGNAFKVSRMMDRKENGSVKASHILISYAGAERANPSVTRTQEEARERA 381 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY 261 + E+R + + + G Y E + F + + T Sbjct: 382 EELLAEARRSGAQFAQLARDNSDGPSAPNGGDLGYFQEGVMTDAFNDFAFGNAVGTVGLV 441 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLS 289 T+ G + + DKRD+ L + Sbjct: 442 ETEFGYHVVKVDDKRDVVRLATLTRAIE 469 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 15/171 (8%), Positives = 42/171 (24%), Gaps = 1/171 (0%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + + + I ++ + V +NGE I+ D R+ Sbjct: 3 ILENIRKRTTVLILIIGMALFAFVVSDVLTRGGFGSDKIGSAVGEVNGEPISIDDFRARM 62 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + V + +T++ + + + + + Sbjct: 63 EAAEGSFGPQATSTQIVNSIWDQTVRTAILGQEFEKLGIDIQQDQIMDLI-RNNPNFTQN 121 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 F D G D + + + L+ + ++ + Sbjct: 122 PQFQDANGNFDEDAFRNFITELRVNQPQQYQMWLQTEDALIQAAKEQTYFD 172 >gi|207725035|ref|YP_002255432.1| ppic-type peptidyl-prolyl cis-trans isomerase protein [Ralstonia solanacearum MolK2] gi|206590265|emb|CAQ37226.1| ppic-type peptidyl-prolyl cis-trans isomerase protein [Ralstonia solanacearum MolK2] Length = 278 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 34/293 (11%), Positives = 79/293 (26%), Gaps = 54/293 (18%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94 + A+ + +NG +T + + IA Q ++ + Q+LI L +Q+ K+ Sbjct: 25 ADALPPGVIALVNGTQVTQAQLDRAIAQSGAQANP-QIAQALKQQLIARELFRQQAAKNP 83 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 V Q I +K++ Sbjct: 84 AYEKLPAVKQAM-----------------------------QEAHDAVITQAWLKDNIKP 114 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 E + ++ +EY R + Q +++ Sbjct: 115 APITDEQVKARYDAIVASLGDKEYKARVIQLGDDVTAAQVLALLKQ-----------GGD 163 Query: 215 DCNKLEKFASKIHDVSIGKAQYL---------LESDLHPQFQNLLKKSQNNT--TNPYVT 263 +++++ + V G ++ +L + T P Sbjct: 164 FAKLAQQYSTAPNKVRGGDMDWVSFKVPAEEGKTQNLPLPLAREIAALGIGATSTAPVEV 223 Query: 264 QKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + R + +KA + ++E+ + V L A + Sbjct: 224 GSQRYIVKVEAARPTQVPAYDTVKAAIRQALESAELERVTVQVVGGLLKQAKV 276 >gi|114776872|ref|ZP_01451915.1| Parvulin-like peptidyl-prolyl isomerase [Mariprofundus ferrooxydans PV-1] gi|114552958|gb|EAU55389.1| Parvulin-like peptidyl-prolyl isomerase [Mariprofundus ferrooxydans PV-1] Length = 92 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 23/80 (28%), Gaps = 1/80 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 + + + + ++ +S + G + P+F + + Sbjct: 12 DTEAQCEALKAEIEGGADFAEVAKEHSSCPSGRNGGDLGEFGPGMMVPEFDKVVFSAEVG 71 Query: 256 NTTNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 72 TVQGPVKTQFGYHLLEVTSR 91 >gi|325523302|gb|EGD01656.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. TJI49] Length = 295 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 24/335 (7%), Positives = 70/335 (20%), Gaps = 69/335 (20%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR------------IRTTINGEVITDGDI 56 + ++ + + A + +NG IT + Sbjct: 1 MFRLNNIIRAGCIAAFLSVATSSMLTPIAHADPAPVTAEEKLPAGTVAVVNGVAITQSAL 60 Query: 57 SKRIALLKLQK---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 + + + +L ++LI + +Q K + Sbjct: 61 DDAVKSVAARTGRPDTPQLRDAIKRQLIAREVLRQNAMKVHFNDMPAVLQAA-------- 112 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 + ++ + E + + ++ Sbjct: 113 ----------------------TAAKESVMIAAYLEANVHPAAITDEQVRARYDELVASL 150 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 +EY R + + + ++ ++++ + G Sbjct: 151 GKKEYKPRVIATKDAADAWKALAALK-----------HGQSFDAVAQQYSVIPSKTAGGA 199 Query: 234 AQYLLESDLHPQ----------FQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLG--G 280 ++ + Q + + T P + + + R Sbjct: 200 MPWVSFKLPVAEGHTQGLPFRLAQAISRLKPGGVTPQPVLADNMHLIVKLDAVRPTKALS 259 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K L + +V A I Sbjct: 260 FDEAKEALRKTLQVGEQRAASTRFVASQVQAATIQ 294 >gi|52783929|ref|YP_089758.1| YacD [Bacillus licheniformis ATCC 14580] gi|163119182|ref|YP_077358.2| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus licheniformis ATCC 14580] gi|319648596|ref|ZP_08002810.1| YacD protein [Bacillus sp. BT1B_CT2] gi|52346431|gb|AAU39065.1| YacD [Bacillus licheniformis ATCC 14580] gi|145902685|gb|AAU21720.2| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus licheniformis ATCC 14580] gi|317389363|gb|EFV70176.1| YacD protein [Bacillus sp. BT1B_CT2] Length = 296 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 90/304 (29%), Gaps = 37/304 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 ++I ++ S + + + I IT + + K ++++ Sbjct: 18 CIVIAYVLTKAQTASSSSAQEVIAHIGKNGITREEWLSEM--------EERYGKSTLEDM 69 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I + + Q EK+ I + + F+ ED + ++ Sbjct: 70 INDRVVTQMAEKNKIKVSDDDIEREFLLIKAVYNSFYEDEN-----------TTEKEWKE 118 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +++ + E+ + K K++ + R + D Q + Sbjct: 119 QIKHNILLEELLTKDIVISDSELKSFYNKNKDLYKFDDSYRLKHIVVKDKDEAEQVLKEL 178 Query: 201 RIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLL---ESDLHPQFQNLLKKSQNN 256 + + ++ G ++ E+ + + +N Sbjct: 179 K---------EGSSFEAAAAEHSTDRYTAPYGGDLGFVNDQHENVPAEYLEKAEQLKENQ 229 Query: 257 TT-NPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 P T +G I + +K +K + Q ++ + VK L +A Sbjct: 230 WVDEPIKTSQGYAIIQLKEKLPGQAFTYSEVKNQIRRQIAMDQLGDKAS--VKTLWKDAK 287 Query: 314 IHYY 317 + ++ Sbjct: 288 LSWF 291 >gi|163858778|ref|YP_001633076.1| peptidyl-prolyl cis-trans isomerase C [Bordetella petrii DSM 12804] gi|163262506|emb|CAP44809.1| peptidyl-prolyl cis-trans isomerase C [Bordetella petrii] Length = 93 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 25/81 (30%), Gaps = 1/81 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256 + + + + + + +S G + +F ++ + Sbjct: 13 TEAKCNELKAAIEGGADFAQVARENSSCPSARDGGNLGTFGPGQMVKEFDTVVFSAPVGV 72 Query: 257 TTNPYVTQKGVEYIAICDKRD 277 P TQ G + + D++D Sbjct: 73 VQGPVKTQFGYHLVEVTDRQD 93 >gi|297521498|ref|ZP_06939884.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli OP50] Length = 152 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 11/106 (10%), Positives = 37/106 (34%), Gaps = 3/106 (2%) Query: 210 LRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVE 268 + ++ ++ I + G +L ++ + + +N K + + + G Sbjct: 1 NKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFL 60 Query: 269 YIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + D + + ++ ++A+ K +K+ A Sbjct: 61 IVRLDDIQPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAA 106 >gi|110636617|ref|YP_676824.1| peptidyl-prolyl cis-trans isomerase [Cytophaga hutchinsonii ATCC 33406] gi|110279298|gb|ABG57484.1| possible peptidyl-prolyl cis-trans isomerase [Cytophaga hutchinsonii ATCC 33406] Length = 773 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 22/170 (12%), Positives = 52/170 (30%), Gaps = 5/170 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + ++ + ++ + +I + Sbjct: 222 VSKPVRTKFGYHILKVVDRRPSQGQIHVAHIMARYSQGMSAEDSILAKNKIDQIYKELQA 281 Query: 212 LPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKK--SQNNTTNPYVTQKGVE 268 +F+ ++ S G+ Q+ + P F+N + T P T G Sbjct: 282 GTSWNELCGEFSDDVNSRSKNGELQWFSTGKMIPSFENAAFTLTTPGQYTTPVQTPYGWH 341 Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV-KKL-RSNAIIHY 316 I + +++ LG L+ + A+ T + + +L R N + Y Sbjct: 342 IIKLLERKPLGSFEELEPSIRAKVTKDSRSDLNKKMLIARLKRENNFVEY 391 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 17/147 (11%), Positives = 49/147 (33%), Gaps = 6/147 (4%) Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + + ++F P+ ++ +I E L+ +++ Sbjct: 133 YERMKEEIRASHILIFCNPEATPKDTLIAYNKIVALRERALKGENFDQLAAQYSEDPSAK 192 Query: 230 -SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 + G Y + +F+ + + P T+ G + + D+R G+I + A+ Sbjct: 193 TNKGDLGYFTALSMVYEFEEAAYNTKVGSVSKPVRTKFGYHILKVVDRRPSQGQIHV-AH 251 Query: 288 LSAQNTPTKIEK---HEAEYVKKLRSN 311 + A+ + + + ++ Sbjct: 252 IMARYSQGMSAEDSILAKNKIDQIYKE 278 >gi|261417353|ref|YP_003251036.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373809|gb|ACX76554.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327407|gb|ADL26608.1| PPIC-type PPIASE domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 335 Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 43/318 (13%), Positives = 84/318 (26%), Gaps = 17/318 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--- 71 L + + I S + S + I+ G I +L Q+ G+ Sbjct: 4 KLISRGAAAVLLTAGIASAQLMNSKSLDVIRVEKTGISAGKIDSLATMLGQQQAPGQKLT 63 Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 L V L+ + L K E +K GI V+ + Sbjct: 64 DEMMTQLRYAVVDNLVGQELIKLEAKKMGIKVAPAKVDSLTNLFKKQFPSEDAFQKELKK 123 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 FK+ + Q +++ E ++ A Q K+ I Sbjct: 124 SN-TTMKQFKEKIEDQLKSEQILEKKVPYPSAPTEKDLEAFWQLNKSKVAINDTISGARI 182 Query: 186 SIPDNKLQNQGFVQKRIKDA---EESRLRLPKDCNKLEKFASKIHDVSIGKA--QYLLES 240 I Q + + R + ++ G +++ +S Sbjct: 183 FISTKGKNAQEISDAKDMLKGLAAQVRSKKATFAQLAAMYSDDKEAKKTGGIMNKFVAKS 242 Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK--AYLSAQNTPTKIE 298 + + K + + GV + +K D E Y+ + + Sbjct: 243 KSAAFAKAVGKIKVGDISEVITENDGVSIFMLTEKNDGKFESYKHQIDYILRVQAEQERQ 302 Query: 299 KHEAEYVKKLRSNAIIHY 316 Y+ L + Y Sbjct: 303 AKLKAYLDDLGKTYKVQY 320 >gi|83647099|ref|YP_435534.1| parvulin-like peptidyl-prolyl isomerase [Hahella chejuensis KCTC 2396] gi|83635142|gb|ABC31109.1| Parvulin-like peptidyl-prolyl isomerase [Hahella chejuensis KCTC 2396] Length = 93 Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 24/80 (30%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 + + D ++ ++ + + G+ + +F Q + Sbjct: 14 EDQCNDLKKQIEDGADFAALAKEHSQCPSGRNGGELGEFGPGQMVKEFDQVVFSAEVGTV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + + + D Sbjct: 74 QGPVKTQFGYHLLEVTKRTD 93 >gi|86133089|ref|ZP_01051671.1| peptidylprolyl isomerase [Polaribacter sp. MED152] gi|85819952|gb|EAQ41099.1| peptidylprolyl isomerase [Polaribacter sp. MED152] Length = 544 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 17/173 (9%), Positives = 47/173 (27%), Gaps = 4/173 (2%) Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + K + M + + ++ I Sbjct: 202 NAAYTTKIDEVSMPFRTRFGYHILKVDGLRPSKGEVEVAHILITDKTAKGEEIINTVYNR 261 Query: 209 RLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQK 265 + + K++ GK + + F + + + P+ T+ Sbjct: 262 LEKDEQFKMLARKYSDDTGSKSKGGKLRRFGSGVMVQPFDEVAFSLTKEGEYSKPFRTRF 321 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNT-PTKIEKHEAEYVKKLRSNAIIHYY 317 G + + K + +K L+++ +++ E V +L+ I + Sbjct: 322 GWHIVQLIKKHPVKSFEEMKKELTSKIRSSDRLQLSEKAVVNRLKKEYKIKEF 374 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 29/291 (9%), Positives = 83/291 (28%), Gaps = 30/291 (10%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 LI+ + + ++ TI E I + + N E + +++ + Sbjct: 4 LILLLFIVFTTASIAQKKDKVLITIGDEKIMVSEFKRVYEKNLDAIDNEEAKD--LEKNL 61 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + + K +T++ + + A + + + Sbjct: 62 DLFINYKLKVKEAYDIKLDTLSSYVKEMKTYRNQLAAPYMQDSAYVSVLVKDAYFRTKNE 121 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 ++ + ++ K+++ ++ ++ V + Sbjct: 122 VKAKHILIRTPKVATPKDTLKAYQKIMKIRDRILK---------------GEDFEKVAEE 166 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNP 260 + + E A + G Y + F+N + + P Sbjct: 167 VSEDE-----------SARADAKSGRVGNKGNLGYFSAFKMVYPFENAAYTTKIDEVSMP 215 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + T+ G + + R GE+ + A++ + K E+ +L + Sbjct: 216 FRTRFGYHILKVDGLRPSKGEVEV-AHILITDKTAKGEEIINTVYNRLEKD 265 >gi|194337592|ref|YP_002019386.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelodictyon phaeoclathratiforme BU-1] gi|194310069|gb|ACF44769.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelodictyon phaeoclathratiforme BU-1] Length = 705 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 30/95 (31%), Gaps = 2/95 (2%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 +L ++ V + + +K+++ ++ G + + Sbjct: 352 HILLHFNPASREDVARVSQLSALIFKQLQAGTPFDALAKKYSADPVSALNGGDIGWFSKE 411 Query: 241 DLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICD 274 + PQF + + P TQ G+ I + Sbjct: 412 RMVPQFAAAVFGARPGSVIGPVQTQFGLHIIKVTG 446 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 33/351 (9%), Positives = 80/351 (22%), Gaps = 63/351 (17%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 S + + L F+ +I + + +NG+VI + Sbjct: 4 MSSLRDKTHIILYTLLAAFLALIVFEWGMDFTGNSGTKQNQAGEVNGKVIPYSQYEEIYK 63 Query: 62 LLKLQ------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--- 106 + + E ++ A ++ +TL Q+++K GIT V Sbjct: 64 AVTENFRRSNPGAEVMPENELEFQEQAWNTVVEQTLLDQQLKKFGITVQDQEVVDALGSA 123 Query: 107 ---VQHARNTGLSAEDFSSFLD---------KQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 Q R + + + ++ + + +++ Sbjct: 124 TNPPQVIRQNFTNPATGAVDRAKLESIRRDPRNKELWLQIEKIVRRELEVNKLLRALQTF 183 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + ++ + N + ++K + +E + Sbjct: 184 VHVTDRELDDIVNRQYSLFSASFIPFPLSFAGPDSNFPVKEEEIKKYYDEHKELLKQFYS 243 Query: 215 DCNKL--------------------------------EKFASKIHDVSIGKAQYLLESDL 242 + D G + +D Sbjct: 244 RKADFVFFPLIPSSKDSLAVRTELETIRAEFSASVNDSDYVKVQSDRPAGINKVYSRADF 303 Query: 243 HPQ----FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 P F N P + I I +A +++ Sbjct: 304 SPAAGDVFFNSPNFKPGTIVGPIADRGEYRLIKIRQISASAPLVARASHIL 354 Score = 42.0 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 5/91 (5%) Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-- 280 A I + Y ++ L + + P T G + + K G Sbjct: 608 ADSIRWSNGAIPGYGVDRSLVE---GMSALVPGKLSAPLKTSDGAALVLLSSKTVPAGLN 664 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 A K+ ++ Q K E+ AEY+ LR Sbjct: 665 RKAEKSAIAPQLLRAKQEQLFAEYIASLRKK 695 >gi|313667751|ref|YP_004048035.1| periplasmic hypothetical protein [Neisseria lactamica ST-640] gi|313005213|emb|CBN86646.1| putative periplasmic hypothetical protein [Neisseria lactamica 020-06] Length = 288 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 80/305 (26%), Gaps = 25/305 (8%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK----INGE 71 + + + + S + T+NG+ I I ++A + + + + Sbjct: 1 MKAKILTSVALLACSGSLFAQT-----LATVNGQKIDSSVIDAQVAAFRAENSSAEDSPQ 55 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L + + + I T+ QE+++ + + + A + Sbjct: 56 LRRALLNQEITHTVVAQEVKRLKLDRSAEFKDMLAKLRAEAEKSGDDK---------KPS 106 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + E + A + ++ + Sbjct: 107 FKTVWQAVEYGLNGRAYALHIAKTQPVSEQDAKAAYDNISGFYKGTQEVQLGEILTDKEE 166 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + + K ++ L+ + ++ V + E + P +Q + Sbjct: 167 NAKKAVADLKAKKGFDAVLKQYSLNDHTKQTGKPDGYVPLKDL----EQGVPPLYQAVKD 222 Query: 252 KSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + T P + D+R++ + Q T + V L Sbjct: 223 LKKGEFTATPLKNGDFYGVYYVNDRREVKV--PSFDEMKEQLTGDLQAERIDRAVGALLD 280 Query: 311 NAIIH 315 A I Sbjct: 281 KADIK 285 >gi|126452826|ref|YP_001066614.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei 1106a] gi|242317337|ref|ZP_04816353.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei 1106b] gi|126226468|gb|ABN90008.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei 1106a] gi|242140576|gb|EES26978.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei 1106b] Length = 644 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 22/303 (7%), Positives = 68/303 (22%), Gaps = 29/303 (9%) Query: 26 CIVPIVSYKSWAMSSRIRT---TINGEVITDGDISKRIALLKLQ-KINGELEKIAVQELI 81 + + +S + +G D + +L +Q + ++ L Sbjct: 107 LSASDGAVRQTLLSDPVIASLKKADG----SFDAERYTQMLAMQGMTPDQYQERVRYNLA 162 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ---------GIGDN 132 ++ + + + + R + + K + Sbjct: 163 LQQIPASIVSSAFTPKSVARRLTELAEQQREVQPMVLKSADYAAKVQPTDAQISAYYDAH 222 Query: 133 HFKQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + +V + +++I + +R I Sbjct: 223 KQAFATRETATIQYLVYSQAAAAAAAQPSDVDIKKYYDDNIAHYRTDAQVRVSHIFIAAA 282 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQ 245 K + AE+ + ++ + A G ++ Sbjct: 283 KDASAAEKAAAKAKAEQLLAEVKAHPDRFAQIAEKNSQDAPSAAKGGDLGFITRGSTAGG 342 Query: 246 FQNLLKK---SQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKH 300 ++ + G + D + + +K ++ K Sbjct: 343 AAFDDAAFALKKDEISGVVQGDFGFHILKATDVKPAVVKPLAEVKDSIATDLRQQFAAKA 402 Query: 301 EAE 303 A+ Sbjct: 403 FAD 405 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/236 (8%), Positives = 67/236 (28%), Gaps = 18/236 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIF---CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + +L+ + +LI+ IV I ++ + S +NG IT + + Sbjct: 1 MLDFFRNHQRLMMFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGTLR 60 Query: 62 LLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF-- 106 Q E + + LI + E ++ ++ V Sbjct: 61 QQVDQARQVLGAQFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLSASDGAVRQTLLS 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + + F + Q + + + ++ + + Sbjct: 121 DPVIASLKKADGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSV 180 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 +++ + ++ ++ ++ D + Q + + + ++ Sbjct: 181 ARRLTELAEQQREVQPMVLKSADYAAKVQPTDAQISAYYDAHKQAFATRETATIQY 236 >gi|53719046|ref|YP_108032.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei K96243] gi|76809896|ref|YP_333865.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei 1710b] gi|254189176|ref|ZP_04895687.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei Pasteur 52237] gi|254259824|ref|ZP_04950878.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei 1710a] gi|52209460|emb|CAH35412.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei K96243] gi|76579349|gb|ABA48824.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei 1710b] gi|157936855|gb|EDO92525.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei Pasteur 52237] gi|254218513|gb|EET07897.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei 1710a] Length = 644 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 22/303 (7%), Positives = 68/303 (22%), Gaps = 29/303 (9%) Query: 26 CIVPIVSYKSWAMSSRIRT---TINGEVITDGDISKRIALLKLQ-KINGELEKIAVQELI 81 + + +S + +G D + +L +Q + ++ L Sbjct: 107 LSASDGAVRQTLLSDPVIASLKKADG----SFDAERYTQMLAMQGMTPDQYQERVRYNLA 162 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ---------GIGDN 132 ++ + + + + R + + K + Sbjct: 163 LQQIPASIVSSAFTPKSVARRLTELAEQQREVQPMVLKSADYAAKVQPTDAQISAYYDAH 222 Query: 133 HFKQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + +V + +++I + +R I Sbjct: 223 KQAFATRETATIQYLVYSQAAAAAAAQPSDVDIKKYYDDNIAHYRTDAQVRVSHIFIAAA 282 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQ 245 K + AE+ + ++ + A G ++ Sbjct: 283 KDASAAEKAAARAKAEQLLAEVKAHPDRFAQIAEKNSQDAPSAAKGGDLGFITRGSTAGG 342 Query: 246 FQNLLKK---SQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKH 300 ++ + G + D + + +K ++ K Sbjct: 343 AAFDDAAFALKKDEISGVVQGDFGFHILKATDVKPAVVKPLAEVKDSIATDLRQQFAAKA 402 Query: 301 EAE 303 A+ Sbjct: 403 FAD 405 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/236 (8%), Positives = 67/236 (28%), Gaps = 18/236 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIF---CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + +L+ + +LI+ IV I ++ + S +NG IT + + Sbjct: 1 MLDFFRNHQRLMMFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGTLR 60 Query: 62 LLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF-- 106 Q E + + LI + E ++ ++ V Sbjct: 61 QQVDQARQVLGAQFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLSASDGAVRQTLLS 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + + F + Q + + + ++ + + Sbjct: 121 DPVIASLKKADGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSV 180 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 +++ + ++ ++ ++ D + Q + + + ++ Sbjct: 181 ARRLTELAEQQREVQPMVLKSADYAAKVQPTDAQISAYYDAHKQAFATRETATIQY 236 >gi|254492427|ref|ZP_05105599.1| PPIC-type PPIASE domain, putative [Methylophaga thiooxidans DMS010] gi|224462319|gb|EEF78596.1| PPIC-type PPIASE domain, putative [Methylophaga thiooxydans DMS010] Length = 93 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 10/82 (12%), Positives = 27/82 (32%), Gaps = 1/82 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 ++ + + + + ++ +S S G + P+F + + N Sbjct: 12 ESEEICLELKREIEQGADFADIAKEHSSCPSGRSGGDLGEFGPGMMVPEFDKVVFSAPVN 71 Query: 256 NTTNPYVTQKGVEYIAICDKRD 277 P TQ G + + + + Sbjct: 72 TVQGPVQTQFGYHLLEVTSRSE 93 >gi|16803484|ref|NP_464969.1| hypothetical protein lmo1444 [Listeria monocytogenes EGD-e] gi|47095395|ref|ZP_00233005.1| protein export protein [Listeria monocytogenes str. 1/2a F6854] gi|224499704|ref|ZP_03668053.1| hypothetical protein LmonF1_08419 [Listeria monocytogenes Finland 1988] gi|224501615|ref|ZP_03669922.1| hypothetical protein LmonFR_03702 [Listeria monocytogenes FSL R2-561] gi|254827732|ref|ZP_05232419.1| rotamase [Listeria monocytogenes FSL N3-165] gi|254829797|ref|ZP_05234452.1| hypothetical protein Lmon1_00510 [Listeria monocytogenes 10403S] gi|254898390|ref|ZP_05258314.1| hypothetical protein LmonJ_01205 [Listeria monocytogenes J0161] gi|254912118|ref|ZP_05262130.1| protein export protein [Listeria monocytogenes J2818] gi|254936446|ref|ZP_05268143.1| rotamase [Listeria monocytogenes F6900] gi|284801831|ref|YP_003413696.1| hypothetical protein LM5578_1586 [Listeria monocytogenes 08-5578] gi|284994973|ref|YP_003416741.1| hypothetical protein LM5923_1538 [Listeria monocytogenes 08-5923] gi|46396979|sp|Q8Y759|PRSA1_LISMO RecName: Full=Foldase protein prsA 1; Flags: Precursor gi|16410873|emb|CAC99522.1| lmo1444 [Listeria monocytogenes EGD-e] gi|47016216|gb|EAL07139.1| protein export protein [Listeria monocytogenes str. 1/2a F6854] gi|258600111|gb|EEW13436.1| rotamase [Listeria monocytogenes FSL N3-165] gi|258609038|gb|EEW21646.1| rotamase [Listeria monocytogenes F6900] gi|284057393|gb|ADB68334.1| hypothetical protein LM5578_1586 [Listeria monocytogenes 08-5578] gi|284060440|gb|ADB71379.1| hypothetical protein LM5923_1538 [Listeria monocytogenes 08-5923] gi|293590088|gb|EFF98422.1| protein export protein [Listeria monocytogenes J2818] Length = 294 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 29/312 (9%), Positives = 88/312 (28%), Gaps = 47/312 (15%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 ++ K++ + + + S + +T ++ + + Sbjct: 1 MTKLKKVMISVIAATLLLLAGCGSSA--------VIKTDAGSVTQDELYEAMKT------ 46 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 VQ+L + + + + + ++ E + + Sbjct: 47 --TYGNEVVQQLTFKKILEDKYTVTEKEVNAEY------------KKYEEQYGDSFESTL 92 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +N K + +V+ E ++ A + + +R +L Sbjct: 93 SSNNLTKTSFKENLEYNLLVQKATEANMDVSESKLKAYYKTW----EPDITVRHIL---- 144 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQ 247 + K+ + K + +++++ + G ++ F+ Sbjct: 145 -------VDDEATAKEIQTKLKNGEKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFE 197 Query: 248 NLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-AQNTPTKIEKHEAEY 304 +++++ + + G I + K + G KA + A ++ Sbjct: 198 KAAYALENKDDVSGIVKSTYGYHLIQLVKKTEKGTYAKEKANVKAAYIKSQLTSENMTAA 257 Query: 305 VKKLRSNAIIHY 316 +KK A I Sbjct: 258 LKKELKAANIDI 269 >gi|315303180|ref|ZP_07873840.1| foldase protein PrsA [Listeria ivanovii FSL F6-596] gi|313628450|gb|EFR96923.1| foldase protein PrsA [Listeria ivanovii FSL F6-596] Length = 291 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 30/310 (9%), Positives = 84/310 (27%), Gaps = 47/310 (15%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 ++ K++ ++ + + S + +T D+ + + Sbjct: 1 MTKLKKVMISFITATLLILAGCGSSA--------VVKTDAGSVTQDDLYEAMKT------ 46 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 VQ+L + + + + ++ E + + Sbjct: 47 --TYGNEVVQQLTFKXXLEDKYTVTKKEVNAEY------------KKYEEQYGDSFESTL 92 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N K + +V+ E ++ + + +R +L Sbjct: 93 ASSNLTKTSFKENIEYNLLVQKATEANMDVSESKLKKYYKTW----QPDITVRHIL---- 144 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQ 247 + K+ + K + +++++ + G ++ F+ Sbjct: 145 -------VDDEDTAKEIQTKLKNGEKFTDLAKEYSTDTATSTNGGLLDPFGTGEMDEAFE 197 Query: 248 NLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEY 304 K+ ++ + + G I + K D KA + A ++ Sbjct: 198 KAAYALKNPDDISGIVKSSYGYHLIQLVKKTDKTTYAKDKAAVKASYIESQLTSENMTAA 257 Query: 305 VKKLRSNAII 314 +KK A I Sbjct: 258 LKKELKAANI 267 >gi|87122616|ref|ZP_01078493.1| peptidyl-prolyl cis-trans isomerase C [Marinomonas sp. MED121] gi|86162074|gb|EAQ63362.1| peptidyl-prolyl cis-trans isomerase C [Marinomonas sp. MED121] Length = 92 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 22/78 (28%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 + + + + +K+++ G + D+ F + + Sbjct: 12 KSKAECEKVKALLDKGGDFHQLAKKYSTCPSAKKGGDLGEFRKGDMVKAFDKAVFNGPLL 71 Query: 256 NTTNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 72 KVQGPIKTQFGFHLIKVL 89 >gi|307720301|ref|YP_003891441.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfurimonas autotrophica DSM 16294] gi|306978394|gb|ADN08429.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfurimonas autotrophica DSM 16294] Length = 92 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 8/78 (10%), Positives = 23/78 (29%), Gaps = 1/78 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +++ + + + +S + G + P+F + + Sbjct: 14 EEKCNELKTEIENGADFGEVAQANSSCPSSRNGGDLGQFGPGQMVPEFDKAVFSGDVGVV 73 Query: 258 TNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 74 YGPIQTQFGYHLLEVTGR 91 >gi|126439578|ref|YP_001059347.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei 668] gi|126219071|gb|ABN82577.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei 668] Length = 644 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 22/303 (7%), Positives = 68/303 (22%), Gaps = 29/303 (9%) Query: 26 CIVPIVSYKSWAMSSRIRT---TINGEVITDGDISKRIALLKLQ-KINGELEKIAVQELI 81 + + +S + +G D + +L +Q + ++ L Sbjct: 107 LSASDGAVRQTLLSDPVIASLKKADG----SFDAERYTQMLAMQGMTPDQYQERVRYNLA 162 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ---------GIGDN 132 ++ + + + + R + + K + Sbjct: 163 LQQIPASIVSSAFTPKSVARRLTELAEQQREVQPMVLKSADYAAKVQPTDAQISAYYDAH 222 Query: 133 HFKQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + +V + +++I + +R I Sbjct: 223 KQAFATRETATIQYLVYSQAAAAAAAQPSDVDIKKYYDDNIAHYRTDAQVRVSHIFIAAA 282 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQ 245 K + AE+ + ++ + A G ++ Sbjct: 283 KDASAAEKAAARAKAEQLLAEVKAHPDRFAQIAEKNSQDAPSAAKGGDLGFITRGSTAGG 342 Query: 246 FQNLLKK---SQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKH 300 ++ + G + D + + +K ++ K Sbjct: 343 AAFDDAAFALKKDEISGVVQGDFGFHILKATDVKPAVVKPLAEVKDSIATDLRQQFAAKA 402 Query: 301 EAE 303 A+ Sbjct: 403 FAD 405 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 21/236 (8%), Positives = 67/236 (28%), Gaps = 18/236 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIF---CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + +L+ + +LI+ IV I ++ + S +NG IT + + Sbjct: 1 MLDFFRNHQRLMMFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGTLR 60 Query: 62 LLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF-- 106 Q E + + LI + E ++ ++ V Sbjct: 61 QQVDQARQVLGAQFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLSASDGAVRQTLLS 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + + F + Q + + + ++ + + Sbjct: 121 DPVIASLKKADGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSV 180 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 +++ + ++ ++ ++ D + Q + + + ++ Sbjct: 181 ARRLTELAEQQREVQPMVLKSADYAAKVQPTDAQISAYYDAHKQAFATRETATIQY 236 >gi|121601506|ref|YP_993264.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei SAVP1] gi|124383444|ref|YP_001029291.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei NCTC 10229] gi|126449228|ref|YP_001080774.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei NCTC 10247] gi|167738127|ref|ZP_02410901.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia pseudomallei 14] gi|217421364|ref|ZP_03452868.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei 576] gi|237812671|ref|YP_002897122.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei MSHR346] gi|251766653|ref|ZP_04819742.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei PRL-20] gi|254179433|ref|ZP_04886032.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei 1655] gi|254198164|ref|ZP_04904586.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei S13] gi|254297318|ref|ZP_04964771.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei 406e] gi|254358198|ref|ZP_04974471.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei 2002721280] gi|121230316|gb|ABM52834.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei SAVP1] gi|124291464|gb|ABN00733.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei NCTC 10229] gi|126242098|gb|ABO05191.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei NCTC 10247] gi|148027325|gb|EDK85346.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei 2002721280] gi|157806973|gb|EDO84143.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei 406e] gi|169654905|gb|EDS87598.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei S13] gi|184209973|gb|EDU07016.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei 1655] gi|217395106|gb|EEC35124.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei 576] gi|237505475|gb|ACQ97793.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei MSHR346] gi|243065067|gb|EES47253.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei PRL-20] Length = 644 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 22/303 (7%), Positives = 68/303 (22%), Gaps = 29/303 (9%) Query: 26 CIVPIVSYKSWAMSSRIRT---TINGEVITDGDISKRIALLKLQ-KINGELEKIAVQELI 81 + + +S + +G D + +L +Q + ++ L Sbjct: 107 LSASDGAVRQTLLSDPVIASLKKADG----SFDAERYTQMLAMQGMTPDQYQERVRYNLA 162 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ---------GIGDN 132 ++ + + + + R + + K + Sbjct: 163 LQQIPASIVSSAFTPKSVARRLTELAEQQREVQPMVLKSADYAAKVQPTDAQISAYYDAH 222 Query: 133 HFKQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + +V + +++I + +R I Sbjct: 223 KQAFATRETATIQYLVYSQAAAAAAAQPSDVDIKKYYDDNIAHYRTDAQVRVSHIFIAAA 282 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQ 245 K + AE+ + ++ + A G ++ Sbjct: 283 KDASAAEKAAAKAKAEQLLAEVKAHPDRFAQIAEKNSQDAPSAAKGGDLGFITRGSTAGG 342 Query: 246 FQNLLKK---SQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKH 300 ++ + G + D + + +K ++ K Sbjct: 343 AAFDDAAFALKKDEISGVVQGDFGFHILKATDVKPAVVKPLAEVKDSIATDLRQQFAAKA 402 Query: 301 EAE 303 A+ Sbjct: 403 FAD 405 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 21/236 (8%), Positives = 67/236 (28%), Gaps = 18/236 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIF---CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + +L+ + +LI+ IV I ++ + S +NG IT + + Sbjct: 1 MLDFFRNHQRLMMFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGTLR 60 Query: 62 LLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF-- 106 Q E + + LI + E ++ ++ V Sbjct: 61 QQVDQARQVLGAQFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLSASDGAVRQTLLS 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + + F + Q + + + ++ + + Sbjct: 121 DPVIASLKKADGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSV 180 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 +++ + ++ ++ ++ D + Q + + + ++ Sbjct: 181 ARRLTELAEQQREVQPMVLKSADYAAKVQPTDAQISAYYDAHKQAFATRETATIQY 236 >gi|330970019|gb|EGH70085.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 93 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 25/80 (31%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 +++ + + + +S G + +F ++ + N Sbjct: 14 EEKCNELKAQIEGGADFAEIAKANSSCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPVNTV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|254785700|ref|YP_003073129.1| nitrogen fixation protein NifM [Teredinibacter turnerae T7901] gi|237686104|gb|ACR13368.1| nitrogen fixation protein NifM [Teredinibacter turnerae T7901] Length = 293 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 16/158 (10%), Positives = 50/158 (31%), Gaps = 5/158 (3%) Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF--VQKRIKDAEESRLRLP 213 E+ + K R +L +I ++ ++N ++K + + Sbjct: 119 VTETEISLYYYMNVAKFQMPEVRTARHILVTINEDNVENSRANSLKKINQIVSRLDKKPD 178 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 + + K + + G + L+P+ + L + + G + Sbjct: 179 RFAEQALKHSECPTSLQGGLMGKVKRGVLYPEIEQALFALKVGELSEVVESPLGFHIVLC 238 Query: 273 CDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + G + L K ++ + ++++ + Sbjct: 239 EEIQQEGTLPLQDVYPRLEEFLLNRKRKQRQRQWLESI 276 >gi|237800457|ref|ZP_04588918.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023316|gb|EGI03373.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 93 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 25/80 (31%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 +++ + + + +S G + +F ++ + N Sbjct: 14 EEKCNELKAQIEGGADFAEIAKANSSCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPVNTV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|66046132|ref|YP_235973.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. syringae B728a] gi|257484577|ref|ZP_05638618.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289650297|ref|ZP_06481640.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. aesculi str. 2250] gi|298486854|ref|ZP_07004910.1| Peptidyl-prolyl cis-trans isomerase ppiC [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|302189910|ref|ZP_07266583.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. syringae 642] gi|63256839|gb|AAY37935.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. syringae B728a] gi|298158721|gb|EFH99785.1| Peptidyl-prolyl cis-trans isomerase ppiC [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330890128|gb|EGH22789.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. mori str. 301020] gi|330901187|gb|EGH32606.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. japonica str. M301072PT] gi|330944508|gb|EGH46494.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. pisi str. 1704B] gi|330950414|gb|EGH50674.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae Cit 7] gi|330980416|gb|EGH78519.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. aptata str. DSM 50252] gi|330988826|gb|EGH86929.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008138|gb|EGH88195.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 93 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 25/80 (31%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 +++ + + + +S G + +F ++ + N Sbjct: 14 EEKCNELKAQIEGGADFAEIAKANSSCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPVNTV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|193214032|ref|YP_001995231.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroherpeton thalassium ATCC 35110] gi|193087509|gb|ACF12784.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroherpeton thalassium ATCC 35110] Length = 728 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 12/150 (8%), Positives = 40/150 (26%), Gaps = 5/150 (3%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + T ++ + ++ + + + +K + Sbjct: 236 KIYDRRPKTQPIRASHIMVALPKSPTPSDTLKAYRKAESILRRIQKGEDFQSIAKKESDD 295 Query: 226 -IHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 + G + + F+ K + + T G I + + + Sbjct: 296 KLSGARGGDLGLFGLNRMVKPFETAAFALKQAGDLSPIIRTPFGYHIILLTGREEPKSYD 355 Query: 283 ALKAYLSAQNTP--TKIEKHEAEYVKKLRS 310 K L + K++ ++++L+ Sbjct: 356 ESKELLKRLLSRNSEKLKHERDLFIQQLKE 385 Score = 55.5 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 49/184 (26%), Gaps = 11/184 (5%) Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 D+ F+ L +D Q + Q P +++ M K Sbjct: 70 DTFAAYQDFLDKYITFRLKVKDAQDRGFGQDPSLLQELKDYRAQLAEPYLMERAVMEKNL 129 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + + +I + ++I +A + L + Sbjct: 130 RDLYDKQQEEINASHILA---------LVSSAADPADTLRAYQKIMEARKLILAGAPFDS 180 Query: 218 KLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 F+ + G Y + QF++ P+ T+ G + I D+ Sbjct: 181 VALAFSEDPSVRQNKGNLGYFSGGMMVYQFEDAAYGGKVGELVGPFRTRYGYHIVKIYDR 240 Query: 276 RDLG 279 R Sbjct: 241 RPKT 244 Score = 36.2 bits (81), Expect = 6.2, Method: Composition-based stats. Identities = 18/263 (6%), Positives = 66/263 (25%), Gaps = 4/263 (1%) Query: 58 KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 I Q ++ L+ + L ++ + ++ + Sbjct: 455 DAIHQYAKQYVDETLKSYEIDHLEARYADFTQLMEDYRDGVLLFKVSDETVWSQAAATDS 514 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 + + +G + ++ + + +D + + + I R+ Sbjct: 515 AGRAYYATHKGDFRLGERMKVSEIVVSEKSLADDIYNELTQNIRQRDVVSAQDVKIQKRK 574 Query: 178 YLIRTVLFSIPDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + +K + + + +++ + ++ Sbjct: 575 IQAQLRKLKKRRDKKSQLKFQKLQEQLTGLQVDDQPRSFEALAARYSETADSLGSAESAI 634 Query: 237 LLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTP 294 + + + L K P + + + + + + Sbjct: 635 FNRGE-NRRVDKLFGKPVGFVAAPESINERYRIMRLDIMLPPTEKTYEEARTEIFSILQE 693 Query: 295 TKIEKHEAEYVKKLRSNAIIHYY 317 E E+V +LR+ + I + Sbjct: 694 QNTRALETEWVNRLRAKSKITVF 716 >gi|261496293|ref|ZP_05992697.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308055|gb|EEY09354.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str. OVINE] Length = 623 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 15/251 (5%), Positives = 54/251 (21%), Gaps = 13/251 (5%) Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH--ARNTGLSAEDFSSFLD 125 G L+ + +I + + A+ Sbjct: 156 QEGMLQSQLQEGIINSDFNVPAQQALLAKLLLQQREVRLAEFSVAKEMENQTASEQELRA 215 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + + + D K +I + K V + Sbjct: 216 YYEANKTKLLAPEKLAVEYVTLSPKDVESKVEITNEQIQTYYDRNKADYVTKGEAHLAHI 275 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 + + + + + K + + + G + Sbjct: 276 QVASEAEAQAIEQALKNGEDFATLAKN--------KSSDTLSANNGGDLGWAKAGTFPKA 327 Query: 246 FQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEA 302 F++ + + + I + +++ +K ++ + + Sbjct: 328 FEDAVANLTAGQMSAAVKVDNAYHIIKVLERKPEQVIELAQVKDKIAQTIRQELVLTEYS 387 Query: 303 EYVKKLRSNAI 313 +++ + A Sbjct: 388 TVAREMANKAF 398 Score = 53.1 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 26/238 (10%), Positives = 69/238 (28%), Gaps = 20/238 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + + F L+ V +NGE I+ + + Sbjct: 1 MIEKMHERTNGPV--FKIIFALVSISFVIGGIGTGLISQDNSVAKVNGEEISQQLFNNTL 58 Query: 61 ALLKLQKI----------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + + LI E L +Q ++ + ++ + Sbjct: 59 NREQNRLNVELGSRFWDLMDSPEYAAQFNQSVLNGLIDEELLRQYAKELKLGISADQIKS 118 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 V + + Y A + ++++ N + +P Sbjct: 119 EIVNSQMFQQDGKFSNELYQQTLRHNNLSADGYAA--IVQEGMLQSQLQEGIINSDFNVP 176 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 A + + + +++ +R FS+ Q+ E ++ +L ++ Sbjct: 177 AQQALLAKLLLQQREVRLAEFSVAKEMENQTASEQELRAYYEANKTKLLAPEKLAVEY 234 >gi|149375261|ref|ZP_01893032.1| peptidyl-prolyl cis-trans isomerase C2 [Marinobacter algicola DG893] gi|149360297|gb|EDM48750.1| peptidyl-prolyl cis-trans isomerase C2 [Marinobacter algicola DG893] Length = 92 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 26/78 (33%), Gaps = 1/78 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 + + ++ + + ++ +S + G + P+F + + N Sbjct: 14 EAKCEELKLAIEGGQDFAEVAKQHSSCPSGRNGGDLGAFGPGQMVPEFDKVVFSGEVNKV 73 Query: 258 TNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 74 LGPVKTQFGYHLLEVTSR 91 >gi|23013326|ref|ZP_00053234.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Magnetospirillum magnetotacticum MS-1] Length = 106 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 9/89 (10%), Positives = 24/89 (26%), Gaps = 1/89 (1%) Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + +++ I + +E + +++ G + + P+F Sbjct: 18 MRSQATRSKDEALTEINNIKEELNQGADFGQMARQYSDCPSGEDGGDLGEFPKGAMVPEF 77 Query: 247 QNLLKK-SQNNTTNPYVTQKGVEYIAICD 274 + + T G I D Sbjct: 78 EVAAFALKSGEVSGVVETPFGFHLIQRTD 106 >gi|313682198|ref|YP_004059936.1| ppic-type peptidyl-prolyl cis-trans isomerase [Sulfuricurvum kujiense DSM 16994] gi|313155058|gb|ADR33736.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfuricurvum kujiense DSM 16994] Length = 92 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 6/79 (7%), Positives = 17/79 (21%), Gaps = 1/79 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256 + + ++ + G + +F + Sbjct: 13 TEAECNELKKQIEEGASFAEIAADNSQCPSGRKGGDLGRFSPGQMVKEFDTAVFNGDVGV 72 Query: 257 TTNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 73 LYGPIKTQFGYHLLEVTAR 91 >gi|193214213|ref|YP_001995412.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroherpeton thalassium ATCC 35110] gi|193087690|gb|ACF12965.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroherpeton thalassium ATCC 35110] Length = 699 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 25/225 (11%), Positives = 53/225 (23%), Gaps = 3/225 (1%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 IT+ DI K + + + +E Sbjct: 216 EITEADIRNYFNEHKEDYKQDPVREANFVMFSTAATTEDTLEIIHDLEALKPKFQTAKND 275 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 L ++ F+ F+ G K V + E +I Sbjct: 276 TEFVELQSDRFADFVKTYRPGKLDAKISRLFFDNPSLKVGDVVGPFQEFSEYKI-VKILA 334 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HD 228 + + R+ +L + + V K K + + Sbjct: 335 IDSDEDRQAHASHILLKPEGARRADTLAVMAEAKQLMRELTSDEKFAEVAREKSDDPGSA 394 Query: 229 VSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAI 272 G + + + +F++ P +Q G+ I + Sbjct: 395 QKGGDLGWFGKGRMVKEFEDAVFHAKPGQIVGPIQSQFGIHIIKV 439 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 2/65 (3%) Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + +NP T++GV + K K L Q K ++ ++K L+ Sbjct: 630 DEGKVSNPIETKRGVAIAELTKKIKGFDSDFEVRKNALKDQILQEKKKEVMNNWLKDLKE 689 Query: 311 NAIIH 315 +A I Sbjct: 690 SAKIE 694 Score = 41.2 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 21/252 (8%), Positives = 66/252 (26%), Gaps = 27/252 (10%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 +K+ S+ + L FVL+I + + +NG+ I+ + Sbjct: 1 MNKMRDSMHIVLYALVGAFVLLIVFEWGMD-FTGLNRRKTDAGVVNGKPISLTEYDATYR 59 Query: 62 LLK------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV-- 107 ++++ + A L+ + L + E+ G+ + + Sbjct: 60 RYLDGFRQRSNNVEISEQMDARMRDQAWDFLVSQILLDDKYEELGLFVTDEEIVSEVMSD 119 Query: 108 ------------QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 A + + + + + ++ + Sbjct: 120 DPPAIIAQQFRDPKTGKINTEALQAAIASPENKEAWIQVEDIIRQELLFKKLQNLVMSGV 179 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + + ++ ++ R L + ++ + +E + P Sbjct: 180 FVTDDEARRLFDEQNTKVSGRYILFELAHAKADSLYEITEADIRNYFNEHKEDYKQDPVR 239 Query: 216 CNKLEKFASKIH 227 F++ Sbjct: 240 EANFVMFSTAAT 251 >gi|221198560|ref|ZP_03571605.1| ppic-type ppiase domain protein [Burkholderia multivorans CGD2M] gi|221207789|ref|ZP_03580796.1| ppic-type ppiase domain protein [Burkholderia multivorans CGD2] gi|221172286|gb|EEE04726.1| ppic-type ppiase domain protein [Burkholderia multivorans CGD2] gi|221181011|gb|EEE13413.1| ppic-type ppiase domain protein [Burkholderia multivorans CGD2M] Length = 262 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 49/171 (28%), Gaps = 5/171 (2%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + + R ++ +++R + A Sbjct: 79 RELTHVPEPDRADCERYYAQHPARFRRNDIVYASHVLFAVTDRVPLAPLRQRAERALADV 138 Query: 210 LRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKG 266 + P + ++ G LL D P+F+ L + T+ G Sbjct: 139 VAAPDTFDAVARASSNCPSAQLGGSLGQLLRGDTVPEFEAALFDTDGLGVLPKLVNTRFG 198 Query: 267 VEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + I + D A+ A ++A T ++ +YV L A I Sbjct: 199 FHIVRIDHRVPGDTVPFDAVAAQIAAHLTARVRQRAMRQYVAILAGGAHIE 249 >gi|83816153|ref|YP_445540.1| peptidylprolyl cis-trans isomerase [Salinibacter ruber DSM 13855] gi|83757547|gb|ABC45660.1| peptidylprolyl cis-trans isomerase [Salinibacter ruber DSM 13855] Length = 691 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 30/367 (8%), Positives = 96/367 (26%), Gaps = 60/367 (16%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + + + +L F II+ + + + ++R T+NG I + D + + Sbjct: 4 MNTLRQNTGVILWILVLSF-GIIWTLQDSDVFSAMNQTNRNVATVNGNPIQNEDYQRILK 62 Query: 62 LLKLQ-----------KINGELEKIAVQELIVETLKKQEIEKSGITFDS---------NT 101 + + ++ + + A +++ + L +QE+++ GI+ Sbjct: 63 RQRQRFQQQMGGDMNPQMESRVRERAYNQVVNQELLQQEMKRLGISVTDSEVEAMVFGEN 122 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---FMLKYGN 158 + + ++ L + Sbjct: 123 PHPVIRRQFADSTGQINYQLLQNMASNPEARTQWIKLEEFLRRQRRQQKMSSLVQSTIQV 182 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 E +I ++ + +Y+ D+ + ++ + E+ R + Sbjct: 183 SEADIKDYYRRQNSSASAQYVALRYARVSDDSITVTESDLRDYYDNNREAYKREKTVTLQ 242 Query: 219 LEKFASKIHDVSI----GKA----------------------------QYLLESDLHPQF 246 + + G Y ++ + Sbjct: 243 YATTSKEATAEDSSGIAGDLAGLRADFATTENDSLFLLNNASDQDFSSAYRTPDQMNARV 302 Query: 247 QNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + + D R + ++ + + A Sbjct: 303 ADSVYASPEPGRIVGPVFGGGQAHLLKVRDTRPAENDFLHARHIL--LKTDQADSEVAGR 360 Query: 305 VKKLRSN 311 ++ +R + Sbjct: 361 LRAIRDS 367 Score = 63.5 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 20/249 (8%), Positives = 56/249 (22%), Gaps = 12/249 (4%) Query: 33 YKSWAMSSRIR---TTINGEVIT--DGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 S A + + ++ + IT + D+ + K + + + Sbjct: 194 QNSSASAQYVALRYARVSDDSITVTESDLRDYYDNNREAYKRE---KTVTLQYATTSKEA 250 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + SGI D + F ++ + S S++ Sbjct: 251 TAEDSSGIAGDLAGLRADFATTENDSLFLLNNASDQDFSSAYRTPDQMNARVADSVYASP 310 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + + R +L + + + Sbjct: 311 EPGRIVGPVFGGGQAHLLKVRDTRPAENDFLHARHILLKT---DQADSEVAGRLRAIRDS 367 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKG 266 +++ G + + F++ P ++ G Sbjct: 368 LEAGAASFAEMARRYSDDGSASDGGDLGWFARGSMVDAFEDAAFGAEPGTLVGPVRSEFG 427 Query: 267 VEYIAICDK 275 I + + Sbjct: 428 YHLIRVEAR 436 Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 6/77 (7%), Positives = 20/77 (25%), Gaps = 1/77 (1%) Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIE 298 + + T+ + K + L + + + Sbjct: 608 GQEPQFVGTVFGLDEGETSGVVAGNNAAFIVKTTQKTTPPPLTDQKRKQLRQRLLKQRRQ 667 Query: 299 KHEAEYVKKLRSNAIIH 315 + + ++ L+ +A I Sbjct: 668 QVSSNWIAALKEDATIK 684 >gi|330504383|ref|YP_004381252.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas mendocina NK-01] gi|328918669|gb|AEB59500.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas mendocina NK-01] Length = 93 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 8/82 (9%), Positives = 25/82 (30%), Gaps = 1/82 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 + + + + + + ++ S G + +F ++ + Sbjct: 12 ASEDKCNELKSAIEGGADFAQLAKDNSTCPSGRSGGDLGSFGPGQMVKEFDTVVFSAPVG 71 Query: 256 NTTNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 72 VVQGPVKTQFGYHLLEVTSRQD 93 >gi|327441514|dbj|BAK17879.1| parvulin-like peptidyl-prolyl isomerase [Solibacillus silvestris StLB046] Length = 287 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 33/299 (11%), Positives = 82/299 (27%), Gaps = 40/299 (13%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 ++ I + + I T IT +++ + ++++ Sbjct: 5 LIGITMTASFLMAACGNTDNEIVATTAYGDITKSGFYEQMKEIAGTT--------LLEQV 56 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 +++ + + E S + Y + E F S L G + FK + Sbjct: 57 VIDKILTDQYEVSDKEIEEQLETYI--------EMYGESFESALATNGYTEETFKDTIRF 108 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q + +++ ++ + Y + + L + Sbjct: 109 QLLQQKAMEDV-----------------EVTEEEIETYYDQGKYELHTRHILVETEEEAQ 151 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 ++ + + + + + G +L SD+ F + + Sbjct: 152 QLYEQISEGSDFETIAKESSQDSE--TAENGGNLGWLSISDMETTFADAAYALETGEVSE 209 Query: 260 PYVTQKGVEYIAICDKRDLGGE---IALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAII 314 P + G E I + DKR++ K + +L A + Sbjct: 210 PVESTLGFEIIQLVDKREVKDYALLEEQKEEIKKTLRERIVANTEWETVEARLLKEANV 268 >gi|294507423|ref|YP_003571481.1| peptidyl-prolyl cis-trans isomerase D [Salinibacter ruber M8] gi|294343751|emb|CBH24529.1| Putative peptidyl-prolyl cis-trans isomerase D [Salinibacter ruber M8] Length = 691 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 30/367 (8%), Positives = 96/367 (26%), Gaps = 60/367 (16%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + + + +L F II+ + + + ++R T+NG I + D + + Sbjct: 4 MNTLRQNTGVILWILVLSF-GIIWTLQDSDVFSAMNQTNRNVATVNGNPIQNEDYQRILK 62 Query: 62 LLKLQ-----------KINGELEKIAVQELIVETLKKQEIEKSGITFDS---------NT 101 + + ++ + + A +++ + L +QE+++ GI+ Sbjct: 63 RQRQRFQQQMGGDMNPQMESRVRERAYNQVVNQELLQQEMKRLGISVTDSEVEAMVFGEN 122 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---FMLKYGN 158 + + ++ L + Sbjct: 123 PHPVIRRQFADSTGQINYQLLQNMASNPEARTQWIKLEEFLRRQRRQQKMSSLVQSTIQV 182 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 E +I ++ + +Y+ D+ + ++ + E+ R + Sbjct: 183 SEADIKDYYRRQNSSASAQYVALRYARVSDDSITVTESDLRDYYDNNREAYKREKTVTLQ 242 Query: 219 LEKFASKIHDVSI----GKA----------------------------QYLLESDLHPQF 246 + + G Y ++ + Sbjct: 243 YATTSKEATAEDSSGIAGDLAGLRADFATTENDSLFLLNNASDQDFSSAYRTPDQMNARV 302 Query: 247 QNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P + + D R + ++ + + A Sbjct: 303 ADSVYASPEPGRIVGPVFGGGQAHLLKVRDTRPAENDFLHARHIL--LKTDQADSEVAGR 360 Query: 305 VKKLRSN 311 ++ +R + Sbjct: 361 LRAIRDS 367 Score = 63.5 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 20/249 (8%), Positives = 56/249 (22%), Gaps = 12/249 (4%) Query: 33 YKSWAMSSRIR---TTINGEVIT--DGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 S A + + ++ + IT + D+ + K + + + Sbjct: 194 QNSSASAQYVALRYARVSDDSITVTESDLRDYYDNNREAYKRE---KTVTLQYATTSKEA 250 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + SGI D + F ++ + S S++ Sbjct: 251 TAEDSSGIAGDLAGLRADFATTENDSLFLLNNASDQDFSSAYRTPDQMNARVADSVYASP 310 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + + R +L + + + Sbjct: 311 EPGRIVGPVFGGGQAHLLKVRDTRPAENDFLHARHILLKT---DQADSEVAGRLRAIRDS 367 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKG 266 +++ G + + F++ P ++ G Sbjct: 368 LEAGAAFFAEMARRYSDDGSASDGGDLGWFARGSMVDAFEDAAFGAEPGTLVGPVRSEFG 427 Query: 267 VEYIAICDK 275 I + + Sbjct: 428 YHLIRVEAR 436 Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 6/77 (7%), Positives = 20/77 (25%), Gaps = 1/77 (1%) Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIE 298 + + T+ + K + L + + + Sbjct: 608 GQEPQFVGTVFGLDEGETSGVVAGNNAAFIVKTTQKTTPPPLTDQKRKQLRQRLLKQRRQ 667 Query: 299 KHEAEYVKKLRSNAIIH 315 + + ++ L+ +A I Sbjct: 668 QVSSNWIAALKEDATIK 684 >gi|319952479|ref|YP_004163746.1| ppic-type peptidyl-prolyl cis-trans isomerase [Cellulophaga algicola DSM 14237] gi|319421139|gb|ADV48248.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cellulophaga algicola DSM 14237] Length = 706 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 10/124 (8%), Positives = 36/124 (29%), Gaps = 2/124 (1%) Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 + K + E++ + ++ + G + + + F + + + Sbjct: 374 KEEAESKAKEVLAEAKKSGAVFADLAKENSDGPSGPRGGDLGFFQKGAMVKPFNDFVFNN 433 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS--AQNTPTKIEKHEAEYVKKLRSN 311 + T G + + +K+DL L + + + + + + Sbjct: 434 GAGSIGLVETDFGFHIVKVEEKQDLYQVANLVREIEPSEETIDLLFQDATKFEMSTVENK 493 Query: 312 AIIH 315 + Sbjct: 494 SKFE 497 >gi|293605263|ref|ZP_06687649.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC 43553] gi|292816319|gb|EFF75414.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC 43553] Length = 267 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 29/276 (10%), Positives = 75/276 (27%), Gaps = 33/276 (11%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 +NG ++D D+ + L L + A+ L++ + E + G+ + Sbjct: 3 VIVNGVELSDADLERE---LPLHADASNPMRHAITALVLRRVLLDEARRLGVP---SPAT 56 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 A+ G S + I + + + Sbjct: 57 AAEPGEAQEEGDSEDA----------------------IITALLARQAAAPVADDAACRR 94 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + + +LF + + + ++ + + Sbjct: 95 FYHANPQRFMVGELIEADHILFQVTPDVNLDM-LRAHANTVLQDLLADPSRFAEVARAQS 153 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLG-- 279 + G L D P+F+ + S T+ G+ + + + + Sbjct: 154 NCPSAAVGGNLGQLGRGDTVPEFERAVFALPSGGLLPQLLQTRHGLHIVRVTRRIEGRML 213 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + ++A + + +Y K L A + Sbjct: 214 PYEHVAQQIAAALSSMSQDTAWRQYTKLLVEQADVQ 249 >gi|71734009|ref|YP_274529.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554562|gb|AAZ33773.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. phaseolicola 1448A] Length = 93 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 24/80 (30%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 ++ + + + +S G + +F ++ + N Sbjct: 14 AEKCNELKAQIEGGADFAEIAKANSSCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPVNTV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|226309756|ref|YP_002769650.1| hypothetical protein BBR47_01690 [Brevibacillus brevis NBRC 100599] gi|226092704|dbj|BAH41146.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 300 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 27/280 (9%), Positives = 81/280 (28%), Gaps = 26/280 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 + + I++ + + + K + ++I + QE ++SGIT D + Sbjct: 35 AAIVGDKTISNDEYVTALK--------QKFGKQVLNDMINREVVFQEAKRSGITVDPKQL 86 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 Q + G + F + L + + +++ + E Sbjct: 87 EQELSQIRDSYGSRTDSE--FEAALIKQAGTTVEALKQEISYQILLQTLATKDMTIKDEE 144 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + R +R + K Q + + + Sbjct: 145 LINVYNSRSDRYTRPMQVRLGQIVVASQKEAEQVLA--------DLKNGADFQTIAKARS 196 Query: 223 ASKIHDVSIGKAQY--LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG 279 V+ G + + ++ L + + +++K ++ + Q + ++R+ Sbjct: 197 IDADTAVNGGDVGWVSIKDNRLPDEAKPIVEKLEKDKYSEAIKIQDQYVIYQLRERREAS 256 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEY---VKKLRSNAIIHY 316 + + +++LR + + Sbjct: 257 --QRTFEEVKDELRREMAFAQVESLDVVLERLRKSVGVQI 294 >gi|255022705|ref|ZP_05294691.1| foldase protein PrsA [Listeria monocytogenes FSL J1-208] Length = 262 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 24/292 (8%), Positives = 84/292 (28%), Gaps = 46/292 (15%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 +++ K++ + + + S + +T ++ + + Sbjct: 1 MTNLKKVMISVIAATLLLLAGCGSSA--------VVKTDAGSVTQDELYEAMKT------ 46 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 VQ+L + + + + + ++ E + + Sbjct: 47 --TYGNEVVQQLTFKKILEDKYTVTEKEVNAEY------------KKYEEQYGDSFESTL 92 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +N K + +V+ E ++ + + +R +L Sbjct: 93 SSNNLTKTSFKENLEYNLLVQKATEANMNVSESKLKTYYKTW----EPDITVRHIL---- 144 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQ 247 + K+ + K + +++++ + G ++ F+ Sbjct: 145 -------VDDEATAKEIQTKLKNGEKFADLAKEYSTDTATSTNGGLLDPFGPGEMDETFE 197 Query: 248 NLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 +++++ + + G I + K + G KA + A +++ Sbjct: 198 KAAYALENKDDVSGIVKSTYGYHLIQLVKKTEKGTYDKEKANVKAAYIESQL 249 >gi|88803460|ref|ZP_01118986.1| peptidyl-prolyl cis-trans isomerase [Polaribacter irgensii 23-P] gi|88781026|gb|EAR12205.1| peptidyl-prolyl cis-trans isomerase [Polaribacter irgensii 23-P] Length = 460 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 29/275 (10%), Positives = 74/275 (26%), Gaps = 12/275 (4%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL- 72 K ++F + + + I ++ D DI+K ++L+ Sbjct: 9 KYTKVLLTAVLFSVSIFQVHAQKIKIDGVAVVIGKNIVLDSDIAKFKQEIELRSEGKITI 68 Query: 73 -EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + ++EL+ + L +T V+ + + + G D Sbjct: 69 TDCEMLEELMQQKLLSHHAVIDSVTVSDAEVSNKVERSIQFFTQEYGSLEKVVSAYGFND 128 Query: 132 NHFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + +++ + K E+ +K + + Sbjct: 129 LEDLKGELYNVQKDNILVEKEQLKITEKVDVTPEEVRLYFNGLKENGELPEFTAEIELAQ 188 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI-----GKAQYLLESDL 242 + R+ + + + A G + ES+ Sbjct: 189 IVLNSVPTDAEELRVLEQLTQIRKEVLEGASFRMKAIINSKDPGVTRDNGLMEVTKESNF 248 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276 +F+ + Q+ + P+ T G I + + Sbjct: 249 IKEFKEVSFSLEQDEISKPFKTLFGYHIIKLHTIK 283 >gi|296535271|ref|ZP_06897478.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] gi|296264392|gb|EFH10810.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] Length = 507 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 36/393 (9%), Positives = 93/393 (23%), Gaps = 83/393 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI--TDGDISK 58 M + + + + +++ F + I S + + I + + Sbjct: 1 MLTALRRLAGTWFAKILFALLVLSFAVWGIEDIVRQFGSDTSVARVGRDAIEVPEAQAAA 60 Query: 59 RIALLKLQKI-----------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 R + ++Q+ L + AV+ L++E +++QE G+ V + Sbjct: 61 RREIGRVQRQLGGSFEITPEMGEALTRQAVEGLVMERVQRQEARHLGLAVPEAAVRDYVW 120 Query: 108 QHARNTGLSAEDFSS----FLDKQGIGDNHFKQYLAIQSIWPDVV--------------- 148 G FL + + F L +V Sbjct: 121 GIPAFQGPDGRFNRIAFDSFLRNNQLSEGEFLTLLRADLERQQMVGAVRAGAAGPDALTR 180 Query: 149 -------KNDFMLKYG-----------NLEMEIPANKQKMKNITVREYLIRTVLFS---- 186 + E ++ + + R L Sbjct: 181 PLLAWEREQRLAEIVRLPFSAAPEPAAPEEAQLRRFHENNADRFSAPEYRRVTLAVLSPE 240 Query: 187 -IPDNKLQNQGFVQKRIKDAEESRLRLPKDC-------NKLEKFASKIHDVSIGK----- 233 + + + ++ + + R + ++ + A Sbjct: 241 TVMGDVQATEEELRAAYEAHRDHYERPERRSLQQALLPDRAKAEALARQWREGADFAAIT 300 Query: 234 ------------AQYLLESDLH--PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RD 277 + L + Q + P + G + + + Sbjct: 301 QAAEAAGGQATELGESDRAGLPLPELAEAAFTLPQGGVSEPVQSPFGWHVVHVTAIAAGE 360 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 G A++ + AQ + E ++ Sbjct: 361 DRGFEAVRPEVEAQVKRERAADLAYERANQVED 393 >gi|53723660|ref|YP_103105.1| peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei ATCC 23344] gi|67642012|ref|ZP_00440775.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia mallei GB8 horse 4] gi|254177616|ref|ZP_04884271.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei ATCC 10399] gi|254200054|ref|ZP_04906420.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei FMH] gi|254206388|ref|ZP_04912740.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei JHU] gi|52427083|gb|AAU47676.1| peptidyl-prolyl cis-trans isomerse D, putative [Burkholderia mallei ATCC 23344] gi|147749650|gb|EDK56724.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei FMH] gi|147753831|gb|EDK60896.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei JHU] gi|160698655|gb|EDP88625.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei ATCC 10399] gi|238523056|gb|EEP86497.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia mallei GB8 horse 4] Length = 644 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 22/303 (7%), Positives = 68/303 (22%), Gaps = 29/303 (9%) Query: 26 CIVPIVSYKSWAMSSRIRT---TINGEVITDGDISKRIALLKLQ-KINGELEKIAVQELI 81 + + +S + +G D + +L +Q + ++ L Sbjct: 107 LSTSDGAVRQTLLSDPVIASLKKADG----SFDAERYTQMLAMQGMTPDQYQERVRYNLA 162 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ---------GIGDN 132 ++ + + + + R + + K + Sbjct: 163 LQQIPASIVSSAFTPKSVARRLTELAEQQREVQPMVLKSADYAAKVQPTDAQISAYYDAH 222 Query: 133 HFKQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + +V + +++I + +R I Sbjct: 223 KQAFATRETATIQYLVYSQAAAAAAAQPSDVDIKKYYDDNIAHYRTDAQVRVSHIFIAAA 282 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQ 245 K + AE+ + ++ + A G ++ Sbjct: 283 KDASAAEKAAAKAKAEQLLAEVKAHPDRFAQIAEKNSQDAPSAAKGGDLGFITRGSTAGG 342 Query: 246 FQNLLKK---SQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKH 300 ++ + G + D + + +K ++ K Sbjct: 343 AAFDDAAFALKKDEISGVVQGDFGFHILKATDVKPAVVKPLAEVKDSIATDLRQQFAAKA 402 Query: 301 EAE 303 A+ Sbjct: 403 FAD 405 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/236 (8%), Positives = 67/236 (28%), Gaps = 18/236 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIF---CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + +L+ + +LI+ IV I ++ + S +NG IT + + Sbjct: 1 MLDFFRNHQRLMMFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGTLR 60 Query: 62 LLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF-- 106 Q E + + LI + E ++ ++ V Sbjct: 61 QQVDQARQVLGAQFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLSTSDGAVRQTLLS 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + + F + Q + + + ++ + + Sbjct: 121 DPVIASLKKADGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSV 180 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 +++ + ++ ++ ++ D + Q + + + ++ Sbjct: 181 ARRLTELAEQQREVQPMVLKSADYAAKVQPTDAQISAYYDAHKQAFATRETATIQY 236 >gi|226197150|ref|ZP_03792727.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei Pakistan 9] gi|225930529|gb|EEH26539.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei Pakistan 9] Length = 644 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 22/303 (7%), Positives = 68/303 (22%), Gaps = 29/303 (9%) Query: 26 CIVPIVSYKSWAMSSRIRT---TINGEVITDGDISKRIALLKLQ-KINGELEKIAVQELI 81 + + +S + +G D + +L +Q + ++ L Sbjct: 107 LSASDGAVRQTLLSDPVIASLKKADG----SFDAERYTQMLAMQGMTPDQYQERVRYNLA 162 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ---------GIGDN 132 ++ + + + + R + + K + Sbjct: 163 LQQIPASIVSSAFTPKSVARRLTELAEQQREVQPMVLKSADYAAKVQPTDAQISAYYDAH 222 Query: 133 HFKQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + +V + +++I + +R I Sbjct: 223 KQAFATRETATIQYLVYSQAAAAAAAQPSDVDIKKYYDDNIAHYRTDAQVRVSHIFIAAA 282 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQ 245 K + AE+ + ++ + A G ++ Sbjct: 283 KDASAAEKAAAKAKAEQLLAEVKAHPDRFAQIAEKNSQDAPSAAKGGDLGFITRGSTAGG 342 Query: 246 FQNLLKK---SQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKH 300 ++ + G + D + + +K ++ K Sbjct: 343 AAFDDAAFALKKDEISGVVQGDFGFHILKATDVKPAVVKRLAEVKDSIATDLRQQFAAKA 402 Query: 301 EAE 303 A+ Sbjct: 403 FAD 405 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/236 (8%), Positives = 67/236 (28%), Gaps = 18/236 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIF---CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + +L+ + +LI+ IV I ++ + S +NG IT + + Sbjct: 1 MLDFFRNHQRLMMFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGTLR 60 Query: 62 LLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF-- 106 Q E + + LI + E ++ ++ V Sbjct: 61 QQVDQARQVLGAQFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLSASDGAVRQTLLS 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + + F + Q + + + ++ + + Sbjct: 121 DPVIASLKKADGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSV 180 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 +++ + ++ ++ ++ D + Q + + + ++ Sbjct: 181 ARRLTELAEQQREVQPMVLKSADYAAKVQPTDAQISAYYDAHKQAFATRETATIQY 236 >gi|324999487|ref|ZP_08120599.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudonocardia sp. P1] Length = 353 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 31/291 (10%), Positives = 74/291 (25%), Gaps = 29/291 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ-------------ELIVETLKKQE 89 +N V+++ D ++ +K + + A + L+VE Sbjct: 58 VLRVNDVVLSEADFQGQVDEIKALYGVEQPSEDADRDRFRRDAAQATAASLVVEQA---A 114 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 E++ + ++ + R DF L G+ + L Q + + + Sbjct: 115 AEQNVVGPETEVQDALARIVEREFPGGRADFVRALGNLGVSEPDLTAELHRQLVTSRLFE 174 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + ++ + ++ + + D Sbjct: 175 QVTAGVPPVTDQDVRTAFDERRDQMQVPEQRELRNIVVDSRDKAD---------DLRRRL 225 Query: 210 LRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGV 267 + + G L + L F + + P T+ G Sbjct: 226 DDGADFATLARADSMDESTKQAGGALGKLPATALDQPFADAAFTTPSGGLFGPVQTRFGW 285 Query: 268 EYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + L A T + E++ + +A I Y Sbjct: 286 NLGQVAGITPAVPLTFEQVAENLRATLTDERAGDAWREWLGERIRDARIDY 336 >gi|212635970|ref|YP_002312495.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella piezotolerans WP3] gi|212557454|gb|ACJ29908.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella piezotolerans WP3] Length = 92 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 26/80 (32%), Gaps = 1/80 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +++ ++ ++ + + + +S G + +F + + N Sbjct: 12 ETEEKCEELKQQIIAGADFADVAKANSSCPSSAQGGDLGSFGPGMMVKEFDEVVFSAPLN 71 Query: 256 NTTNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 72 EVQGPVKTQFGYHLLEVTSR 91 >gi|304405852|ref|ZP_07387510.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus curdlanolyticus YK9] gi|304345095|gb|EFM10931.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus curdlanolyticus YK9] Length = 364 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 19/281 (6%), Positives = 73/281 (25%), Gaps = 6/281 (2%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA---VQELIVETLKKQ 88 + + ++ +TD + + + L E+ ++ + E + + Sbjct: 40 TKAPASGEGKVIAEYKDGTVTDKEFDRYLGFFSLVNEQAEMYLTVPSMKEQFLREYIGYK 99 Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 + ++ + +A+ + K + V+ Sbjct: 100 VLYSRVDEKSKDSSKEEVDKFVDQFKQTADSNAEMKAKMEKSGLTVDNAAWYYRMIVSVM 159 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + I N +++ + ++ K+ ++ ++ Sbjct: 160 DHSEQNVKDADMKAIYDKAPSDFNNITVRHILIGFKDPSTGKEKLSKADALKKAQEVKQK 219 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKG 266 ++++ G E + + + +P T+ G Sbjct: 220 LEAGGDWAALAKQYSDDEGSKDKGGLYENQEPRVWVEAFKKAANTQEIGKIGDPVETEYG 279 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + +KR+ + + + +++ K Sbjct: 280 YHVMKV-EKRETRTWEQVPQATKDELRKSASTTVLNDFMTK 319 >gi|269123720|ref|YP_003306297.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Streptobacillus moniliformis DSM 12112] gi|268315046|gb|ACZ01420.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Streptobacillus moniliformis DSM 12112] Length = 599 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 30/267 (11%), Positives = 84/267 (31%), Gaps = 4/267 (1%) Query: 47 NGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 N I+ D + AL KL+++ E E+ + V + K G + + N Sbjct: 227 NNAKISISDKTIEPALNKLKEVFFEKEEYKFTYMDVLSQIVNLFFKQGNGYTEDFQNMIK 286 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + ++ + ++ I + V E Sbjct: 287 GLIETDLDKKIRIRDKAIESGLTLNQDLLPKYQLEYIAEEYVSKLIGSYVATEEEMRAIF 346 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + ++ + ++ + + ++ + ++ + +K + + Sbjct: 347 NKYQGAFDIQHTVSGEIIGMAYIPSDDDAKETENKVIELMKTITK-ENFADKARELSKDP 405 Query: 227 -HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 + G ++ P+F+ + K + P TQ G I + +K + +IA Sbjct: 406 GSAQNGGDLGKANINNFVPEFRTAVAKAEAGSIVGPIKTQFGYHIILVEEKDENNKDIAT 465 Query: 285 KAYLSAQNTP-TKIEKHEAEYVKKLRS 310 ++ + + ++ V +++ Sbjct: 466 LKHILIKVEAGERTKEEIKNKVLEIKE 492 >gi|293400822|ref|ZP_06644967.1| putative foldase protein PrsA [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305848|gb|EFE47092.1| putative foldase protein PrsA [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 333 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 36/325 (11%), Positives = 87/325 (26%), Gaps = 26/325 (8%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSY---------KSWAMSSRIRTTINGEVITDGDISKR 59 + K + +IF + + TING+ I+ D+ Sbjct: 2 IDTLKKQWFVVLIALIFIGFTVFIIYDTNKGKLPGKSENGKDVIATINGKSISADDLYDS 61 Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 + L A +I E++K + + +N A ++G SAE+ Sbjct: 62 MYKSNGGNTLLYLRFQA--AVIDESVKSTDEIEKTADQLKEYLNSNAQNQASSSGQSAEE 119 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + + Y ++ D+ ++ + + + Sbjct: 120 YLKTELAKYGFQEDELDYFCNVQAKMSKMQKDY------IDKHMEELFTPLYEKNKGRTV 173 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL-- 237 ++ N + + + + + + K + G Y+ Sbjct: 174 SHILVKMKDANNPTEEEMKTVKAIEKDLKTMSFAEVAKKYKDKGDTSSAEKGGFLGYMDS 233 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQ----KGVEYIAIC--DKRDLGGEIALKAYLSAQ 291 + + LK + +N G I + DK + + K + + Sbjct: 234 TTGFVDSFKKQALKMKKGEVSNWVKESNDNYNGWHMIKVEETDKDAILKDKKAKDSIYSA 293 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHY 316 + Y+ + + Y Sbjct: 294 IENANSDLASK-YISEAMKKLDVTY 317 >gi|17549753|ref|NP_523093.1| signal peptide protein [Ralstonia solanacearum GMI1000] gi|17432008|emb|CAD18685.1| putative ppic-type peptidyl-prolyl cis-trans isomerase signal peptide protein [Ralstonia solanacearum GMI1000] Length = 282 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 33/286 (11%), Positives = 78/286 (27%), Gaps = 54/286 (18%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 + +NG IT + + IA +Q ++ + Q+LI L +Q+ K+ Sbjct: 35 VIALVNGTRITQEQLDRAIAQSGVQANP-QVAQALKQQLIARELFRQQAAKNPAYDKLPA 93 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 V Q I +K++ E Sbjct: 94 VKQAM-----------------------------QEAHDAVITQAWLKDNIKPAPITEEQ 124 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + ++ +EY R + Q +++ ++ Sbjct: 125 VKARYDAIVASLGDKEYKARVIQLGDDVTAAQVLAQLKQ-----------GGDFAKLAQQ 173 Query: 222 FASKIHDVSIGKAQYLLESD-----------LHPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 +++ + V G ++ L + + +T P + Sbjct: 174 YSTAPNKVRGGDMDWVSFKVPVEEGKTQNLPLPLAREIAALGTGATSTAPVEVGSQRYIV 233 Query: 271 AICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + R + G ++ + ++E+ + V L A + Sbjct: 234 KVEAARPTQVPGYDTVRPAIRQALETAELERVTVQVVGGLLKQAKV 279 >gi|326795821|ref|YP_004313641.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinomonas mediterranea MMB-1] gi|326546585|gb|ADZ91805.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinomonas mediterranea MMB-1] Length = 613 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 27/305 (8%), Positives = 79/305 (25%), Gaps = 22/305 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + I + F+++ F + + + + SS ++G+ IT + + Sbjct: 1 MLQDIRDRSQSLIVKIIIGFIVVTFALFGVDALVTSFNSSETVAEVDGKEITRTQVLQTA 60 Query: 61 ALLKLQ-------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + Q L++ A+ LI + K + + + ++ V Sbjct: 61 DTQRRQLISMMGNNIDPSLLDENLLQRRALDSLIELAVLKNQADGLELGVSDAQIDSLLV 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + D + +L+ Y + ++ + + + E Sbjct: 121 SAEQYQTDGVFDQNKYLNAIRSLGFTPLAYK------ERIKESYVLSQLRSAVTESEFAL 174 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 N + + + + + +D E+ Sbjct: 175 PSQVNAISELQNQKRTYEYVQFSLADQTEQTDVTDGELQAYYDDHQQDFVSPEQVKISYV 234 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 V+ ++ + T + + R ++ A Sbjct: 235 VVTTDALATNVKVTDQELQNAYQTEIAGLDT---EERDASHILIDTSIRSEDEAKSIIAE 291 Query: 288 LSAQN 292 + ++ Sbjct: 292 IQSKL 296 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 27/260 (10%), Positives = 69/260 (26%), Gaps = 12/260 (4%) Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH-ARNTGLSAED 119 +K + +L + E ++ + + A T + Sbjct: 152 ERIKESYVLSQLRSAVTES---EFALPSQVNAISELQNQKRTYEYVQFSLADQTEQTDVT 208 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 F ++ + V + + E+ Q E Sbjct: 209 DGELQAYYDDHQQDFVSPEQVKISYVVVTTDALATNVKVTDQELQNAYQTEIAGLDTEER 268 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238 + + + ++ + I + + + ++++ G+ ++ Sbjct: 269 DASHILIDTSIRSED--EAKSIIAEIQSKLASGDSFASLAKEYSDDPGSKDVGGELGFVA 326 Query: 239 ESDLHPQFQNLLKKSQNNTTNPY---VTQKGVEYIAIC--DKRDLGGEIALKAYLSAQNT 293 + L F++ TQ G+ I + DK D L+ L+A T Sbjct: 327 KGALGESFESFEDALFAMNVGDIQEAETQYGLHLIKLNAIDKADAPTLEELRDQLTADIT 386 Query: 294 PTKIEKHEAEYVKKLRSNAI 313 K + + + + A Sbjct: 387 ARKAKDALLDAQENIADLAY 406 >gi|320324321|gb|EFW80400.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. glycinea str. B076] gi|320328556|gb|EFW84558.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. glycinea str. race 4] gi|330885585|gb|EGH19734.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. glycinea str. race 4] Length = 93 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 25/80 (31%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 ++ K+ + + +S G + +F ++ + N Sbjct: 14 AEKCKELKAQIEGGADFAEIAKANSSCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPVNTV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|224368980|ref|YP_002603144.1| PpiC1 [Desulfobacterium autotrophicum HRM2] gi|223691697|gb|ACN14980.1| PpiC1 [Desulfobacterium autotrophicum HRM2] Length = 93 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 23/82 (28%), Gaps = 1/82 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 + +D + +K + G + P+F + + ++ Sbjct: 12 DTEAMCQDLIDQINNGTDFAELAKKHSKCPSGRQGGDLGEFGPGQMVPEFDKVVFNEAVG 71 Query: 256 NTTNPYVTQKGVEYIAICDKRD 277 P T G + I + + Sbjct: 72 KPHGPVKTTFGFHVVEITSRTE 93 >gi|254514975|ref|ZP_05127036.1| conserved hypothetical protein [gamma proteobacterium NOR5-3] gi|219677218|gb|EED33583.1| conserved hypothetical protein [gamma proteobacterium NOR5-3] Length = 276 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 87/302 (28%), Gaps = 44/302 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 L+T I+ + +V + +NG + ++ + + + Sbjct: 9 LITGVAAGILIALTGLVDAGHAPLPDTTAALVNGTPVPRDELQSVLQRRAQEGAPVDQLL 68 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + ++I E L Q + GI + V +Q + L+ E + + Q Sbjct: 69 ATLDDMIDEELLIQRASELGILRRDSNVRVAIIQAMEKSILNEERGRNLAEAQLQEFYRD 128 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 L + + + + + + + Sbjct: 129 NTALFAEPLRFQLEEIVVEDETQATAI--------------------------ITALREG 162 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 ++ S RLP+ L + + + + + + D+ Sbjct: 163 LSAKALAAENDAVSITRLPQVPLSLSALSRRFPQDLVSRLETAGKGDILTD--------- 213 Query: 255 NNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 +++G+ I I D R+ ++ + + + + EY++ LR A Sbjct: 214 -------KSERGIRIIKILDVREANVPPFEDVRLSVLNELQMYRQDIAYEEYLEWLRQRA 266 Query: 313 II 314 I Sbjct: 267 DI 268 >gi|22124271|ref|NP_667694.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis KIM 10] gi|45442924|ref|NP_994463.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis biovar Microtus str. 91001] gi|170026250|ref|YP_001722755.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia pseudotuberculosis YPIII] gi|186893515|ref|YP_001870627.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia pseudotuberculosis PB1/+] gi|21957040|gb|AAM83945.1|AE013636_3 peptidyl-prolyl cis-trans isomerase C [Yersinia pestis KIM 10] gi|45437791|gb|AAS63340.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis biovar Microtus str. 91001] gi|169752784|gb|ACA70302.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia pseudotuberculosis YPIII] gi|186696541|gb|ACC87170.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia pseudotuberculosis PB1/+] Length = 98 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 1/76 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +K+ D +KF++ + G + D+ P F + + Sbjct: 20 EKQANDILAQLNNGANFQELAKKFSNCPSKRNGGDLGEFNKGDMVPAFDKAVFSCELLQP 79 Query: 258 TNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 80 YGPVKTQFGYHIIKVL 95 >gi|119356179|ref|YP_910823.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium phaeobacteroides DSM 266] gi|119353528|gb|ABL64399.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium phaeobacteroides DSM 266] Length = 700 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 32/115 (27%), Gaps = 2/115 (1%) Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 E K K +L + V++R+ ++ K Sbjct: 329 EYRLLKIKEVRTAQPIARASHILLRFNPGNKEEVEKVRERMVMIFKNLQAGVPFETLAGK 388 Query: 222 FASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICD 274 ++ V G + + P+F + + P T+ G+ I + Sbjct: 389 YSEDPGSAVQGGDLGWFTRESMLPEFSAAVFSGTPGAVVKPVQTKFGLHIIKVTG 443 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 47/135 (34%), Gaps = 12/135 (8%) Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI---GKAQYLLE-----SDLH 243 ++K ++ L + L+K A+ + +++ Sbjct: 563 TAELVRLKKEPVLEKKLSLNAKQSGATLDKIAAAYPGTVVVTADDIRWVDGFIPGYGFDQ 622 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE---IALKAYLSAQNTPTKIEKH 300 P + + ++ + P T G + + K+++ E A K + + K+ + Sbjct: 623 PLVEAMSAMTEGKLSGPVKTNDGYAIV-LLSKKNMPAERDVEAAKTAFTPKIIQDKLNRL 681 Query: 301 EAEYVKKLRSNAIIH 315 EY ++ NA+I Sbjct: 682 FTEYFATIKKNAVIE 696 Score = 37.0 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 19/177 (10%), Positives = 45/177 (25%), Gaps = 7/177 (3%) Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + +S+ P+ F G + + + I + Sbjct: 404 WFTRESMLPEFSAAVFSGTPGAVVKPVQTKFGLHIIKVTGFDQTAVIASEIVRTIRPSTE 463 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE----SDLHPQFQNLLKK 252 V + A +++ + K+ G Sbjct: 464 TVDSARRLAMAFQMQAKDKGLEKSASTEKLVVGKTGDFGKHTLIADIGFSDKITAFAFNG 523 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLG---GEIALKAYLSAQNTPTKIEKHEAEYVK 306 + ++ T+KG + + D G + LK ++A+ K E + + Sbjct: 524 KEGALSDVIETEKGFYVMKLTGVNDTGYRRLDADLKKRITAELVRLKKEPVLEKKLS 580 >gi|328465489|gb|EGF36718.1| protein secretion PrsA (post-translocation molecular chaperone) [Listeria monocytogenes 1816] Length = 261 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 25/306 (8%), Positives = 87/306 (28%), Gaps = 48/306 (15%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 ++ K++ + + + S + +T ++ + + Sbjct: 1 MTKLKKVMISVIAATLLLLAGCGSSA--------VVKTDAGSVTQDELYEAMKT------ 46 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 VQ+L + + + + + ++ E + + Sbjct: 47 --TYGNEVVQQLTFKKILEDKYTVTEKEVNAEY------------KKYEEQYGDSFESTL 92 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +N K + +V+ E ++ + + +R +L Sbjct: 93 SSNNLTKTSFKENLEYNLLVQKATEANMNVSESKLKTYYKTW----EPDITVRHIL---- 144 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQ 247 + K+ + K + +++++ + G ++ F+ Sbjct: 145 -------VDDEATAKEIQTKLKNGEKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFE 197 Query: 248 NLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305 +++++ + + G I + K + G KA + A +++ + Sbjct: 198 KAAYALENKDDVSGIVKSTYGYHLIQLVKKTEKGTYAKEKANVKAAYIESQL--TTENMI 255 Query: 306 KKLRSN 311 L+ + Sbjct: 256 AALKKS 261 >gi|52842082|ref|YP_095881.1| hypothetical protein lpg1855 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629193|gb|AAU27934.1| peptidyl prolyl cis-trans isomerase D [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 624 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 24/233 (10%), Positives = 68/233 (29%), Gaps = 8/233 (3%) Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 EI++ + + + A+ + + L ++ Sbjct: 167 FALSDEIKRFVRLYMQTRDYDYLTVPSDRFEQQAKISEDDIKSYYNQHHKKFMTLEQVTL 226 Query: 144 WPDVVK-NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 ++ +D + EI + ++ K+ + R + + Sbjct: 227 DYVLLSMHDIKSQIKISPDEIKSYYEENKSNYLTPAQWRVAHILFAVPENATKEEQDSIK 286 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDV-----SIGKAQYLLESDLHPQFQNLLKKSQNNT 257 + A+E L K + +K+ + D + G ++ Sbjct: 287 QKADEVYSDLKKHPEQFDKYVASKSDDKLSIANKGILPWITGGQNEYDRVLSNLTRPGQI 346 Query: 258 TNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKL 308 + P T+ G E + + + + ++ + Q T + A+ +++L Sbjct: 347 SIPVQTKYGYEIFKLIAYKPVTTKSLQEVENIIMDQLTSDMAQAKYAQVLEQL 399 Score = 60.1 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 25/218 (11%), Positives = 56/218 (25%), Gaps = 8/218 (3%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + + L + I F + + Y S + +N IT Sbjct: 1 MLQKLNEHIQGVVAWLVIILIAITFTLFGVDYYFQSRQISDAKVIVNDRPITMQAFETNY 60 Query: 61 ALLKLQK--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + Q+ L+ + ++I + Q K G N VQ + Sbjct: 61 RRTRAQQDLPQMTAADEKNLQNQVLNQMITNEVSIQAARKYGFEVSPEQANAAIVQIPQF 120 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + + F + + + Sbjct: 121 QEDGHFSAQRYQQALSGALFTPETFQNEVRQGMLLNQQRFAFMGTSFALSDEIKRFVRLY 180 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + R+Y TV + + + K + + Sbjct: 181 MQTRDYDYLTVPSDRFEQQAKISEDDIKSYYNQHHKKF 218 >gi|77459294|ref|YP_348801.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens Pf0-1] gi|77383297|gb|ABA74810.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens Pf0-1] Length = 93 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 24/80 (30%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 + + + + + ++ G + +F ++ + N Sbjct: 14 EAKCNELKAQIEGGADFAEVAKANSTCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPINVV 73 Query: 259 -NPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|289422879|ref|ZP_06424710.1| putative foldase protein PrsA [Peptostreptococcus anaerobius 653-L] gi|289156709|gb|EFD05343.1| putative foldase protein PrsA [Peptostreptococcus anaerobius 653-L] Length = 325 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 41/325 (12%), Positives = 103/325 (31%), Gaps = 33/325 (10%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69 IK F+ + I+ +++ + I + + + +++ I L K + + Sbjct: 3 IKKNKFTFICALILILMPITFLACKQ-DEIVASTDKFDVRLSEVNDNIKLAKFEYNSIFG 61 Query: 70 ---------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 + +K + LI+ K +E +K+G ++ +N +N Sbjct: 62 DDSWKSVVVSSDGSTEQFKKSVIDYLIMSHYKDEENKKNGYSYSEEELNDMLDSAKQNIE 121 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 + + K + + +F + E +I + N Sbjct: 122 EDKIKSNEYKSLNIDDHVLKKYIRDKMIENKN--QEEFNKRVKIKEEDIKKYYKDKINEF 179 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGK 233 + ++ N K + ++K++ + + G Sbjct: 180 KEKEFDCYQIWIKNPNDKIKAENAYK-------DLKKGMDFSTVVKKYSEDENSKNKGGY 232 Query: 234 AQYLLESDLHPQFQNLLKKSQN-NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292 + + +L P+ + ++ T ++ G I I ++R+L + + Sbjct: 233 IGKIKKENLIPELREKALIMRDKEYTGVVKSKDGYFIIKIDNQRNLTKTLDS---CRTKI 289 Query: 293 TPTKIEKHEAEYVKKLRSNAIIHYY 317 +EK E KK+ + + YY Sbjct: 290 KDDLLEKLYQENNKKIINRIGVKYY 314 >gi|167033786|ref|YP_001669017.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida GB-1] gi|166860274|gb|ABY98681.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida GB-1] Length = 93 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 25/80 (31%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 +++ + + + ++ G + +F ++ + N Sbjct: 14 EEKCNELKAQIEAGADFAEIAKANSTCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPVNTV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|307823841|ref|ZP_07654069.1| nitrogen fixation protein NifM [Methylobacter tundripaludum SV96] gi|307735135|gb|EFO05984.1| nitrogen fixation protein NifM [Methylobacter tundripaludum SV96] Length = 292 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 27/246 (10%), Positives = 68/246 (27%), Gaps = 8/246 (3%) Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + + A+ E +E+ E + + + + Q R+ + F S L+K + Sbjct: 36 QQAQIQALNEFRIESRVLNTPEAAAVIITDQELQHA-YQEIRDRYDDEDAFFSDLEKNRL 94 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + L Q V+++ E++I I Sbjct: 95 SKASLQAALHRQCKVNTVLESIASHAPAISEIDIGIYYHLHAEQFNCPERREVSHIFISI 154 Query: 190 NKLQNQ----GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HP 244 N + + + + AE+ + K + + + + G + L Sbjct: 155 NPDYAENTPEAALSRAQELAEKLHKKPHKFADLALRHSECPTALQGGVLGIVPRGTLYPE 214 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA--YLSAQNTPTKIEKHEA 302 L ++ ++ G+ + + KA + + Sbjct: 215 LDAVLFNLKPGEVSDVVKSEIGLHLLLCKSIQKAETLSLAKATPKIRQLMKERARRTCQR 274 Query: 303 EYVKKL 308 ++ L Sbjct: 275 AWLAGL 280 >gi|19075413|ref|NP_587913.1| peptidyl-prolyl cis-trans isomerase Pin1 [Schizosaccharomyces pombe 972h-] gi|21542175|sp|O74448|PIN1_SCHPO RecName: Full=Peptidyl-prolyl cis-trans isomerase pin1; Short=PPIase pin1 gi|3560257|emb|CAA20742.1| peptidyl-prolyl cis-trans isomerase Pin1 [Schizosaccharomyces pombe] Length = 175 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 10/154 (6%), Positives = 31/154 (20%), Gaps = 1/154 (0%) Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + F + + + + N+ E + + Sbjct: 19 NRPYFFNTETHESLWEPPAATDMAALKKFIANELQESVTPTEASNSPKIRASHLLVKHRE 78 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 R + + + + + + K + G+ Sbjct: 79 SRRPSSWKEEHITRSKEEARKLAEHYEQLLKSGSVSMHDLAMKESDCSSARRGGELGEFG 138 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 ++ F++ + T G I Sbjct: 139 RDEMQKPFEDAAFALKPGEISGVVETSSGFHIIQ 172 >gi|238784761|ref|ZP_04628764.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia bercovieri ATCC 43970] gi|238714357|gb|EEQ06366.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia bercovieri ATCC 43970] Length = 93 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 1/76 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +K+ D +KF++ + G + D+ P F + + Sbjct: 15 EKQANDILAQLNNGADFQELAKKFSNCPSKRNGGDLGEFNKGDMVPAFDKAVFSCELLQP 74 Query: 258 TNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 75 YGPVKTQFGYHIIKVL 90 >gi|189345807|ref|YP_001942336.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium limicola DSM 245] gi|189339954|gb|ACD89357.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium limicola DSM 245] Length = 701 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 31/95 (32%), Gaps = 2/95 (2%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 +L ++ V++R+ + ++++ V G + Sbjct: 350 HILLQFNPASREDVAKVRERMVEIYRKLQSGESFEALAKQYSQDSGSAVKGGDIGWFGRK 409 Query: 241 DLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICD 274 + P+F + + T P T+ G+ I + Sbjct: 410 SVVPEFAEAVFSSRPGALTRPVQTKFGLHIIKVTG 444 Score = 49.7 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 35/123 (28%), Gaps = 6/123 (4%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 + + + + + G P + + Sbjct: 578 KQLASLSAKPGATLETIAAGNKAFSIVKADDIRWTDGYIPGYGIDR--PLVEAISGMKSG 635 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAY---LSAQNTPTKIEKHEAEYVKKLRSNA 312 + P T G + + DKR L G + +K + K E+ AEY +R +A Sbjct: 636 LLSRPVKTTGGYALVRL-DKRVLAGGVDMKEAKAGILPNLLRAKQEQFFAEYFASVRKSA 694 Query: 313 IIH 315 I Sbjct: 695 AIE 697 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 22/176 (12%), Positives = 51/176 (28%), Gaps = 7/176 (3%) Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + P+ + F + G L + V + + V+ Sbjct: 411 VVPEFAEAVFSSRPGALTRPVQTKFGLHIIKVTGFDQNNLVCSEVVRLIRPSTETVESAR 470 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE----SDLHPQFQNLLKKSQNNTT 258 + A +++ + K+ G+ K ++ + + Sbjct: 471 RLATAFQMQAKDQGFDKSAISEKLPVAKTGEFGKHTPIAAVGFNDKINAFAFKAAEGDLS 530 Query: 259 NPYVTQKGVEYIAICDKRDLG---GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 T+KG + + K D G + LK ++A+ K E + + L + Sbjct: 531 EVIETEKGFYVMRLTGKNDTGYRLLDDDLKKRITAELVREKKEAALEKQLASLSAK 586 >gi|20808476|ref|NP_623647.1| parvulin-like peptidyl-prolyl isomerase [Thermoanaerobacter tengcongensis MB4] gi|20517095|gb|AAM25251.1| Parvulin-like peptidyl-prolyl isomerase [Thermoanaerobacter tengcongensis MB4] Length = 264 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 36/298 (12%), Positives = 83/298 (27%), Gaps = 43/298 (14%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQKIN 69 +K + +L +F + + S +++G IT ++ + A LK + + Sbjct: 1 MKKIVLLLILPVFALSILSGCGSKQ-----IASVHGIPITQAELEREKAFLKNDFAKMSD 55 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 EL K A++ L + + E +K GI +N + T L+ ED Sbjct: 56 EELTKTALENLKAKKAVEYEAQKEGIAVTDEELNKAWQNIKDKTKLTKEDLK-------- 107 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + D + N + E+ + K+ + + Sbjct: 108 -----------DILLSDKLFNKYTKDITVNPEEVEQFYETHKDYYTTVKVYEISVRD--- 153 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + E+++ + G + S Sbjct: 154 ---------KDTADMVYQKLKSGEDFSKLFEQYSIDRISGNGGFMGEIPVSQ----KFFG 200 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + P I ++ + +K + K + +K+ Sbjct: 201 VSLKPDTIYEPIPVNNEGYIILKTTEQIIKPFDEVKDGIELYLLNQKKLDFYHKKIKE 258 >gi|237736222|ref|ZP_04566703.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium mortiferum ATCC 9817] gi|229421775|gb|EEO36822.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium mortiferum ATCC 9817] Length = 575 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 22/204 (10%), Positives = 60/204 (29%), Gaps = 2/204 (0%) Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 A+ S ++ K+G+ + + + + + + ++ A +K Sbjct: 270 AKKYYDSQIKIANEAKKRGVTADETLPVDYQFAQYQKGLFENIKSGIKPTDADLKAYFEK 329 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + + + K + L K ++ + Sbjct: 330 NSLKYDTFPSAQADIAIVKIEPSSEDKVKAKAEAEEILKTLTSENFKEKAKELSQGPSAG 389 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 + G+ + + D+ FQ + + + P T G I I D+ D + Sbjct: 390 NGGELGWFSKGDMVEPFQKAVFEGEVGKVYPTPVETVFGYHLILIEDRNDKESKAKASHI 449 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSN 311 L + + +++L++ Sbjct: 450 LIIPKVSEATINSKEKEIEELKNK 473 Score = 39.7 bits (90), Expect = 0.63, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 9/225 (4%) Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK----- 58 K + FI +T F+ + + S++ ++ ++G+ I+ D+ K Sbjct: 5 KFRKHIKPFIWFITILFIASSAMLAYMNMKSSYSRANVYAFKLDGDKISKIDVEKTKANL 64 Query: 59 ---RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 L + +E IA ++I L + E+ + ++ VN + N+ Sbjct: 65 TQGYSRYLGDKLDKDLIEVIAFDDIINRNLTLKIAEELNLKVPNSEVNAQ-YEAIENSVG 123 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + E F L QG FK + + + E + + + Sbjct: 124 NKEQFKRMLAVQGYTKKTFKNEIKNNMLIEKTFQKIQEGIVPTEEEIMNNYNENKNTLYS 183 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + L I K Q ++ + + ++ + + Sbjct: 184 EKSLDEAKEDIIKSLKEQKGMEEYLKLLEKIKVSAKIEDISQEYQ 228 >gi|78357053|ref|YP_388502.1| peptidyl-prolyl cis-trans isomerase C [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219458|gb|ABB38807.1| peptidyl-prolyl cis-trans isomerase C [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 93 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 26/81 (32%), Gaps = 1/81 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 ++ + ++ + + + G + + P+F + + N Sbjct: 13 TEEACLELKKRIEAGEAFADIAREHSRCPSGRRGGDLGKFRKGQMVPEFDEVVFSGDLNV 72 Query: 257 TTNPYVTQKGVEYIAICDKRD 277 P TQ G + I ++ + Sbjct: 73 VHGPVRTQFGFHLLEITERSE 93 >gi|56476342|ref|YP_157931.1| putative rotamase (prolyl cis-trans isomerase) [Aromatoleum aromaticum EbN1] gi|56312385|emb|CAI07030.1| putative Rotamase (prolyl cis-trans isomerase) [Aromatoleum aromaticum EbN1] Length = 250 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 23/270 (8%), Positives = 60/270 (22%), Gaps = 26/270 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 I+ E I G+ + + L LI E ++ + + Sbjct: 4 IVRIDDESIGSGEFVRILKLTGR-----------FDSLIDEIVRDRLTVHAAKKQGVAVS 52 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + A + + I + + M + + Sbjct: 53 ADEIQERADQFRRVLGLHRAADMNHYLDARGVSLDEFEAFITDSLYQEKMMQRV-CSDQA 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q + VL + + + Sbjct: 112 VEEYFQLNSPKFDSIEVSHIVL-----------ETEGQAKEMMSLLAEDPDSFTELAREH 160 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKG--VEYIAICDKRDLG 279 + G ++ L + + + + + P+ G E + K Sbjct: 161 SIADTRDDGGFIGKVMRGSLKTEIEAKVFNAAPGDLLGPFAAPDGAFYEIFLVNAKNPAR 220 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + A + + ++V ++R Sbjct: 221 LDEETAAEVRRLLREGWLAARAQDHVIEMR 250 >gi|222839387|gb|EEE77724.1| predicted protein [Populus trichocarpa] Length = 235 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 42/277 (15%), Positives = 77/277 (27%), Gaps = 48/277 (17%) Query: 44 TTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 +NG+ + ++ ELE +E+I + QE K + Sbjct: 2 AVVNGKAVPKARAEALKQQIEQSGRPVTPELEGQIKEEVIAREIFMQEANKRSLANSEAY 61 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 LA Q+I + DF K + Sbjct: 62 KQQL-------------------------------ELARQTILIRALFEDFQKKNPVTDA 90 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 E A K + + + +++ + K K E+ +K Sbjct: 91 EAKAEYDKAVAANSGKEYKASHILVESEDRAKAIIAEIKAGKKFEDI----------AKK 140 Query: 222 FASKI-HDVSIGKAQYLLESDLHPQFQN--LLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 + G + + P+F + + T P TQ G I + D R Sbjct: 141 ESKDPGSGARGGDLDWANPGNYVPEFSEALIKLEKGGMTQEPVKTQFGYHIIRLDDARQA 200 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 E+ + Q ++ A++ + LR A I Sbjct: 201 --ELPKFEEVKPQIVQQLQQQKLAQFQESLREKAKIQ 235 >gi|152955225|emb|CAM59673.1| parvulin-type peptidyl prolyl cis/trans isomerase [Lotus japonicus] Length = 289 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 14/108 (12%), Positives = 36/108 (33%), Gaps = 1/108 (0%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 QK + D + + + +++ G ++ + + P+F+ + Sbjct: 93 EEDQKLLLDLLQRISKGEDLSDLAVEYSICPSKDEGGMLGWVRKGQMVPEFEEAAFGAPL 152 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSAQNTPTKIEKHEA 302 N TQ G + + +R+ ++ A L A+ + Sbjct: 153 NKVVRCKTQFGWHLLQVLSEREESLLQDIQPAELHAKFQDPNFSEEAQ 200 >gi|186470963|ref|YP_001862281.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia phymatum STM815] gi|184197272|gb|ACC75235.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia phymatum STM815] Length = 259 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 13/156 (8%), Positives = 45/156 (28%), Gaps = 7/156 (4%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQN---QGFVQKRIKDAEESRLRLPKDCNKLE 220 ++ R +LF++ + + ++ + + Sbjct: 88 YYAANPGRHAPGERVHARHILFAVTPGVDIEALRRLAEASLVDLRCDAVEHGERFARAAK 147 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAIC--DKR 276 + ++ + G+ + ++ P+ L T+ G + + ++ Sbjct: 148 ELSNCPTGDAGGELGWFTAAECVPELARELFGLPYVGVLPRLVATRFGFHIVDVLARERA 207 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + ++A ++ +YV L + A Sbjct: 208 NTPPFETVRAAIAQTLRQHAFANALRQYVSLLAAQA 243 >gi|292493646|ref|YP_003529085.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus halophilus Nc4] gi|291582241|gb|ADE16698.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus halophilus Nc4] Length = 308 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 19/237 (8%), Positives = 57/237 (24%), Gaps = 14/237 (5%) Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 E ++ + + A + + + + Q + ++ Sbjct: 51 EAKQWQGLTGDRERLRDLALDFHSNWVLAAEAEDLGLAEDPKVAAQLRAVRRQVLARALM 110 Query: 149 KNDFMLKYGNLEMEIP----ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV---QKR 201 K + ++ K+ R + + ++R Sbjct: 111 KKVAGEAAVPSDRDLKALARERYSLHKDKLRTAEKRRVAHILLAEPADCPCDERPPARER 170 Query: 202 IKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKA-QYLLE-SDLHPQFQNLLK--KSQNN 256 L + + G+ ++ L F++ + Sbjct: 171 AAALRRELLAGGDFGAAARERSRDKGTAPDGGELPGWIKRDGRLVKPFEDAAFALTKPGD 230 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + P T GV I + + + + + + A +++ RS + Sbjct: 231 ISKPVETPFGVHLIKLLEVKPSR--QLSFEEVKGKLMRQVRAEVRASAMEQKRSQSY 285 >gi|254499150|ref|ZP_05111837.1| conserved hypothetical protein [Legionella drancourtii LLAP12] gi|254351629|gb|EET10477.1| conserved hypothetical protein [Legionella drancourtii LLAP12] Length = 624 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 28/267 (10%), Positives = 73/267 (27%), Gaps = 18/267 (6%) Query: 52 TDGDISKRIALLKLQKINGELE---KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 T + L A+ + I +K + + Sbjct: 141 TQLSFQNEVKQGMLLNQQRFAFIGSSFALPDEIERFVKLYMQNRDYDYVTISA------- 193 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 AR + + D F + + + N+ + +I Sbjct: 194 -ARFEKDAHVSPEAIADYYKQHQKEFMAPEQVSLDYVLLSMNNIKKHIKISDDDIKRFYN 252 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + +N + + + ++ + + K A+++ L KD + EK + + D Sbjct: 253 ENQNNYLTPAQWQVAHILFATPEDVSKDELDQIQKKADDAYAALQKDPAQFEKLVTTLSD 312 Query: 229 VSI-----GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI- 282 + G ++ + P T+ G E + + + + Sbjct: 313 DKLSVAEKGALPWITAGQNDYDKILSNLTKPGEISAPEKTKHGYEIFKLIAYKPVTMKSL 372 Query: 283 -ALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++ + Q + A +++L Sbjct: 373 AEVETTIKEQLLAEMAQTQYAHALEQL 399 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 27/217 (12%), Positives = 60/217 (27%), Gaps = 11/217 (5%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + + L + I F + + Y ++ + T+NGE +T+ Sbjct: 1 MLQKLNERIQGVVAWLVVILIGITFTLFGVDYYFQSHQTTNSKVTVNGEPLTEQAFEINY 60 Query: 61 ALLKLQK--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQH 109 + + +L+ + +++ + Q +G N N Q Sbjct: 61 RRARGMQDIAQMTAEDEKKLQNQVLDQMVTNEVMVQAAHTNGFNVSLNQANAAILNIPQF 120 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + S+E + L F+ + + + + K Sbjct: 121 QEDGHFSSEKYQQALSAALFTQLSFQNEVKQGMLLNQQRFAFIGSSFALPDEIERFVKLY 180 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 M+N I F + + E Sbjct: 181 MQNRDYDYVTISAARFEKDAHVSPEAIADYYKQHQKE 217 >gi|134277039|ref|ZP_01763754.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei 305] gi|134250689|gb|EBA50768.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei 305] Length = 644 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 23/303 (7%), Positives = 69/303 (22%), Gaps = 29/303 (9%) Query: 26 CIVPIVSYKSWAMSSRIRT---TINGEVITDGDISKRIALLKLQ-KINGELEKIAVQELI 81 + + +S + +G D + +L +Q + ++ L Sbjct: 107 LSASDGAVRQTLLSDPVIASLKKADG----SFDAERYTQMLAMQGMTPDQYQERVRYNLA 162 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ---------GIGDN 132 ++ + + + + R + + K + Sbjct: 163 LQQIPASIVSSAFTPKSVARRLTELAEQQREVQPMVLKSADYAAKVQPTDAQISAYYDAH 222 Query: 133 HFKQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + +V + +++I + +R I Sbjct: 223 KQAFATRETATIQYLVYSQAAAAAAAQPSDVDIKKYYDDNIAHYRTDAQVRVSHIFIAAA 282 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQ 245 K + AE+ + ++ + A G ++ Sbjct: 283 KDASAAEKAAAKAKAEQLLAEVKAHPDRFAQIAEKNSQDAPSAAKGGDLGFITRGSTAGG 342 Query: 246 FQNLLKK---SQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKH 300 ++ + G + D + + +K ++ T K Sbjct: 343 AAFDDAAFALKKDEISGVVQGDFGFHILKATDVKPAVVKPLAEVKDSIATDLTQQFAAKA 402 Query: 301 EAE 303 A+ Sbjct: 403 FAD 405 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 21/236 (8%), Positives = 67/236 (28%), Gaps = 18/236 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIF---CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + +L+ + +LI+ IV I ++ + S +NG IT + + Sbjct: 1 MLDFFRNHQRLMMFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGTLR 60 Query: 62 LLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF-- 106 Q E + + LI + E ++ ++ V Sbjct: 61 QQVDQARQVLGAQFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLSASDGAVRQTLLS 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + + F + Q + + + ++ + + Sbjct: 121 DPVIASLKKADGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSV 180 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 +++ + ++ ++ ++ D + Q + + + ++ Sbjct: 181 ARRLTELAEQQREVQPMVLKSADYAAKVQPTDAQISAYYDAHKQAFATRETATIQY 236 >gi|90407687|ref|ZP_01215866.1| peptidyl-prolyl cis-trans isomerase C [Psychromonas sp. CNPT3] gi|90311156|gb|EAS39262.1| peptidyl-prolyl cis-trans isomerase C [Psychromonas sp. CNPT3] Length = 93 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 1/79 (1%) Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT 258 + +D ++ + +K ++ + G + P+F + + Sbjct: 15 ELCEDLKKQIEAGSDFTSIAQKHSTCPSGATGGDLGQFGPGQMVPEFDKVVFSAPIGEVQ 74 Query: 259 NPYVTQKGVEYIAICDKRD 277 P TQ G + + ++ D Sbjct: 75 GPVKTQFGYHLLEVTERDD 93 >gi|78357081|ref|YP_388530.1| hypothetical protein Dde_2038 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219486|gb|ABB38835.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 335 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 88/309 (28%), Gaps = 26/309 (8%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------GE 71 V+ I+ K + T+NG + ++ R L L + Sbjct: 5 IAAVVAACVIMAAAGCKDDVEQQGVVATVNGSPVYLQELEARYDLDHLSWSGAMVPSVDQ 64 Query: 72 LEKI---AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 L K A+ LIV+ L +Q++EKSG+ V + + +F L + Sbjct: 65 LRKDYGSALAGLIVQRLVEQDLEKSGLDVTDEEVLKAEEEVRAD--YPPGEFEKVLVEDY 122 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 I ++ L E + + + Sbjct: 123 IDLATWRYMLRQHLQREKFRSEILRPAISLSFEEAEDYYKAHLSDF-----YLPERINFL 177 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 ++G V+K E + R + + ++ Q Sbjct: 178 YISGPDRGTVEKARDLLTEGKDRAEVLGSFSQLSVRELKMREDRIHGTWK--------QL 229 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVK 306 L K + + G E + +AY + K+++ A++++ Sbjct: 230 LAKLEDGQASPVLNGEAGYEAFIMLGLLPEKVLGPSQAYPIIERLLIEEKMQQVYAQWLE 289 Query: 307 KLRSNAIIH 315 K +A + Sbjct: 290 KRLESAEVK 298 >gi|260591262|ref|ZP_05856720.1| putative peptidyl-prolyl cis-trans isomerase [Prevotella veroralis F0319] gi|260537127|gb|EEX19744.1| putative peptidyl-prolyl cis-trans isomerase [Prevotella veroralis F0319] Length = 474 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 26/281 (9%), Positives = 74/281 (26%), Gaps = 36/281 (12%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 + S TING+ ++ + E + ++ I + + K + Sbjct: 18 FGQSDPTIMTINGQPVSRSEFE-------YSYNKNNAEGVIDKKSIADYVDLFINYKLKV 70 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + + + Q + Sbjct: 71 QAALDARLDTLSSFKQEFLTYRDQ---------------------QIRPSFLTN----SD 105 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR-LPK 214 +I ++ + +L + + + K + D+ + L+ Sbjct: 106 IEKAARDIYQETKESIEANGGLWCCAHILVGLNQRATKEEELKAKVLADSIYNALQHGAN 165 Query: 215 DCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAI 272 +K+++ + G+ L + +F++ + + P ++ G I + Sbjct: 166 FGELAKKYSADRESAQNGGELPLLQKGQTVQEFEHAMLALKPGEMSKPTLSPYGYHIIKM 225 Query: 273 CDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNA 312 L +L A + ++ + + L A Sbjct: 226 IAHEGLAPYDSLHARILQFIEMRGLRDQIVDKKLDSLVQQA 266 >gi|21672423|ref|NP_660490.1| survival protein SurA precursor [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25091307|sp|Q8KA01|SURA_BUCAP RecName: Full=Chaperone surA homolog; Flags: Precursor gi|21623033|gb|AAM67701.1| survival protein SurA precursor [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 432 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 47/158 (29%), Gaps = 2/158 (1%) Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 +I + + K E+ I+ L Q + D + Sbjct: 273 KINKIENENKENLTTEFHIQHCLIRPSVILDDKQAKNSIYYIYNNIKNKKYSFDYAVQKL 332 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDL-G 279 G ++ F+N +N + P + G I + D R + Sbjct: 333 SHDVYSSHKKGDLGWISTDFFSNDFRNFLTDLRKNEISKPIKSNFGWHIIKLLDIRQVDK 392 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 K + KI+K ++++L+ ++ I + Sbjct: 393 SNRIDKNLVYRFLLEKKIKKERYNWIRQLKKSSYIKIF 430 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 34/283 (12%), Positives = 85/283 (30%), Gaps = 15/283 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-------RIALLKLQK 67 + + +L +F ++Y +I +N ++I + D+++ +K+ Sbjct: 2 KVYFFLILYVFLSFFSITYSKELEIDKIIAIVNNQIILNSDVNQVLFSLKEEDQRVKIPL 61 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS---FL 124 L +++LI ETL +E +K I + VN ++A ++ E+ Sbjct: 62 KINFLRNKIIKKLITETLILEEAKKFNIVVTDDQVNNVLSKYALKKNITIEELKRNILMN 121 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + + S+ ++++ + ++ + T E + Sbjct: 122 NTNTSFSYNDYFNKIKNSLKVKIIQDYVLHNRVHISEKEVDLFLNKLINTQNELKKIDIN 181 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + K K + + K + + + S Sbjct: 182 CIFLPFIKEKNKIFIKNTKILADHFAKKIKKDASFNYYYEYFKKNNNIFLSKEIRSKSLK 241 Query: 245 QFQNLLKK-----SQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 + + +N P + KG + I + E Sbjct: 242 YLKKIFLNKLKIIKKNQILGPILGLKGFYILKINKIENENKEN 284 >gi|89100502|ref|ZP_01173363.1| YacD [Bacillus sp. NRRL B-14911] gi|89084768|gb|EAR63908.1| YacD [Bacillus sp. NRRL B-14911] Length = 296 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 31/291 (10%), Positives = 76/291 (26%), Gaps = 35/291 (12%) Query: 15 LLTTYFV--LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 ++ + FV +I ++ I +A S + + IT + + Sbjct: 9 IIASLFVLNIIFILLLTIRPAVLFAGSGETVAEVGKDKITREEWLNEM--------EQRY 60 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 K + +LI + + EK + + V + Sbjct: 61 GKEVLNDLIDQKVIGAMAEKYDVEVSKDAVERELTLVKTMYQGNRLQQL----------- 109 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + Q + +++ E E+ + K++ + K Sbjct: 110 -DESKWKEQIKYSLLLEELLTRDVVVTEEEMKDYYDQNKSLFQVPDSYHISQIVVKTKKE 168 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL---HPQFQNL 249 Q + +E+ + G+ ++ E D Sbjct: 169 AEQTIKE--------LENGSSFPVLAMERSIDEFTANQGGETGFISEEDERFSQDFIDEA 220 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIE 298 K + + P + G I + + D +K + Q +++ Sbjct: 221 AKLKEGEWSEPVEVEDGYAVILLHEHLDGRNYAFKDVKNQIRRQVALEQMD 271 >gi|51594518|ref|YP_068709.1| peptidyl-prolyl cis-trans isomerase [Yersinia pseudotuberculosis IP 32953] gi|108806143|ref|YP_650059.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis Antiqua] gi|108810256|ref|YP_646023.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis Nepal516] gi|145600740|ref|YP_001164816.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis Pestoides F] gi|153947180|ref|YP_001399170.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pseudotuberculosis IP 31758] gi|153997073|ref|ZP_02022206.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis CA88-4125] gi|162419617|ref|YP_001605102.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis Angola] gi|165926365|ref|ZP_02222197.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis biovar Orientalis str. F1991016] gi|165939696|ref|ZP_02228239.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis biovar Orientalis str. IP275] gi|166009691|ref|ZP_02230589.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis biovar Antiqua str. E1979001] gi|166213502|ref|ZP_02239537.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis biovar Antiqua str. B42003004] gi|167402058|ref|ZP_02307537.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421055|ref|ZP_02312808.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425941|ref|ZP_02317694.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468459|ref|ZP_02333163.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis FV-1] gi|218930874|ref|YP_002348749.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis CO92] gi|229837207|ref|ZP_04457372.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Yersinia pestis Pestoides A] gi|229839569|ref|ZP_04459728.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Yersinia pestis biovar Orientalis str. PEXU2] gi|229900131|ref|ZP_04515268.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Yersinia pestis biovar Orientalis str. India 195] gi|229900422|ref|ZP_04515551.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Yersinia pestis Nepal516] gi|270488780|ref|ZP_06205854.1| PPIC-type PPIASE domain protein [Yersinia pestis KIM D27] gi|51587800|emb|CAH19402.1| peptidyl-prolyl cis-trans isomerase [Yersinia pseudotuberculosis IP 32953] gi|108773904|gb|ABG16423.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis Nepal516] gi|108778056|gb|ABG12114.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis Antiqua] gi|115349485|emb|CAL22459.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis CO92] gi|145212436|gb|ABP41843.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis Pestoides F] gi|149289379|gb|EDM39457.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis CA88-4125] gi|152958675|gb|ABS46136.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pseudotuberculosis IP 31758] gi|162352432|gb|ABX86380.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis Angola] gi|165912386|gb|EDR31020.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis biovar Orientalis str. IP275] gi|165921889|gb|EDR39086.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis biovar Orientalis str. F1991016] gi|165991613|gb|EDR43914.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis biovar Antiqua str. E1979001] gi|166205175|gb|EDR49655.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis biovar Antiqua str. B42003004] gi|166961184|gb|EDR57205.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048532|gb|EDR59940.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055089|gb|EDR64888.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229682441|gb|EEO78528.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Yersinia pestis Nepal516] gi|229686911|gb|EEO78990.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Yersinia pestis biovar Orientalis str. India 195] gi|229695935|gb|EEO85982.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706150|gb|EEO92159.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Yersinia pestis Pestoides A] gi|270337284|gb|EFA48061.1| PPIC-type PPIASE domain protein [Yersinia pestis KIM D27] gi|320013526|gb|ADV97097.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 93 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 1/76 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +K+ D +KF++ + G + D+ P F + + Sbjct: 15 EKQANDILAQLNNGANFQELAKKFSNCPSKRNGGDLGEFNKGDMVPAFDKAVFSCELLQP 74 Query: 258 TNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 75 YGPVKTQFGYHIIKVL 90 >gi|145346556|ref|XP_001417752.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577980|gb|ABO96045.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 230 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 16/136 (11%), Positives = 46/136 (33%), Gaps = 7/136 (5%) Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYL 237 +L D + + + ++S L +++ G Y Sbjct: 61 HASHILCGTGDAGKRKCQDYAEMLTPYQDSAHTLERAFAELARRYSECPTGSDGGDLGYF 120 Query: 238 LESDLHPQFQNLLKKSQ---NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-AQNT 293 ++ F++++ S+ + P T+ G + + + + +A L + Sbjct: 121 PRGEMSRDFESVVFDSKTPLDAVVGPVETRNGWHVMLVHHRHLADEDAKERARLKSEEMK 180 Query: 294 PTKIE--KHEAEYVKK 307 ++E + + EY ++ Sbjct: 181 RERLERAEKQKEYQEE 196 >gi|213970614|ref|ZP_03398740.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. tomato T1] gi|301386322|ref|ZP_07234740.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. tomato Max13] gi|302060903|ref|ZP_07252444.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. tomato K40] gi|302133966|ref|ZP_07259956.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924611|gb|EEB58180.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. tomato T1] gi|331015428|gb|EGH95484.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 93 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 25/80 (31%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 +++ + + + +S G + +F ++ + N Sbjct: 14 EEKCNELKTQIEGGADFAEVAKANSSCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPVNTV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|330808744|ref|YP_004353206.1| peptidylprolyl isomerase (peptidyl-prolyl cis-trans isomerase) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376852|gb|AEA68202.1| peptidylprolyl isomerase (peptidyl-prolyl cis-trans isomerase) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 93 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 24/81 (29%), Gaps = 1/81 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257 + + + + + +S G + +F ++ + N Sbjct: 13 TEDKCNELKAQIEAGADFAEVAKANSSCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPINV 72 Query: 258 T-NPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 73 VQGPVKTQFGYHLLEVTSRQD 93 >gi|325294382|ref|YP_004280896.1| hypothetical protein Dester_0180 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064830|gb|ADY72837.1| hypothetical protein Dester_0180 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 440 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 33/339 (9%), Positives = 86/339 (25%), Gaps = 31/339 (9%) Query: 1 MTSKVFTSLSDF---IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS 57 M SK+ ++ F + ++ FV IF + S + S T+NGE I + + Sbjct: 1 MLSKIRKNMRAFSLPLWIVAASFVGTIFLVWGKGSLTGPSGSE--VATVNGEPIDLIEFN 58 Query: 58 KRI------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 + + + E++ A+Q LI L +E +K GI V Sbjct: 59 REYNQLTNQLQQQFGENYRKLFPDKEIKIAALQRLINRKLVLEEAKKEGIQVSDWAVAKR 118 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + + + + + +++ + + Sbjct: 119 IRSFP-FLQKDGKFSEELYKEFLKANRLSPKVFEDKIREDLLIEKIMAVIDKAPSVTTFE 177 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + + + ++ +++ ++ L K Sbjct: 178 LQNLYRKTFGKREFKYKLFLKKDYKPSISEKELREFYRENISQFKEKTGKKYFLIKIPKS 237 Query: 226 IHDVSI-----GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK--------GVEYIAI 272 D L + + F + + + + Sbjct: 238 QKDSEGLARKVYNLAKLGKVEKLNDFHPQQVNDKKLISEKFKDKNFGFYSDESNYYVFFK 297 Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + +K + K + + ++ Sbjct: 298 KEGEKAKPFETVKKDIEKTLKEKKAVELAKKSAEEFLKK 336 >gi|312961354|ref|ZP_07775859.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens WH6] gi|311285012|gb|EFQ63588.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens WH6] Length = 93 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 24/81 (29%), Gaps = 1/81 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256 + + + + + +S G + +F ++ + N Sbjct: 13 TEDKCNELKAQIEGGADFAEVAKANSSCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPVNT 72 Query: 257 TTNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 73 VQGPVKTQFGYHLLEVTSRQD 93 >gi|255547349|ref|XP_002514732.1| rotamase, putative [Ricinus communis] gi|223546336|gb|EEF47838.1| rotamase, putative [Ricinus communis] Length = 145 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 9/103 (8%), Positives = 30/103 (29%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R +L + + + + ++ + +++ G Sbjct: 44 TYVKARHILCEKQGKINEAYKKL-QDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLG 102 Query: 236 YLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRD 277 + + FQ + + T+ P+ + G I +++ Sbjct: 103 WFPRGKMAGPFQEVAFNTVVGATSAPFKSTHGYHIILCEGRKN 145 >gi|325523743|gb|EGD02000.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. TJI49] Length = 261 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 47/172 (27%), Gaps = 5/172 (2%) Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + + + R ++ +++R + A Sbjct: 77 ERELTHLPEPDRADCERYYAQHPARFRRNDIVYASHVLFAVTDRVPLAPLRQRAEAALAD 136 Query: 209 RLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQK 265 + P ++ G LL D P+F+ L S T+ Sbjct: 137 VVAAPDTFEAVARASSNCPSAQLGGSLGQLLRGDTVPEFEAALFDSDGIGVLPKLVNTRF 196 Query: 266 GVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 G + I + D A ++A + E+ +YV L A + Sbjct: 197 GFHIVRIERRVPGDTVPFDEAAAQIAAHLSARVRERAMRQYVAILAGKAHLE 248 >gi|307133009|ref|YP_003885025.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Dickeya dadantii 3937] gi|306530538|gb|ADN00469.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Dickeya dadantii 3937] Length = 93 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +++ D + +K ++ + G + D+ P F + + Sbjct: 13 DTEQQATDILAQLEKGADFQQLAKKHSTCPSKHNGGDLGEFRKGDMVPDFDKAVFSCELL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 73 KPFGPVKTQFGYHIIKVL 90 >gi|327402946|ref|YP_004343784.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fluviicola taffensis DSM 16823] gi|327318454|gb|AEA42946.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fluviicola taffensis DSM 16823] Length = 459 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 24/276 (8%), Positives = 76/276 (27%), Gaps = 19/276 (6%) Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--INGELEKIA 76 + +F + + M ++ + ++ ++ + LK + + Sbjct: 5 LLISFLFTLAFTNVFAQPKMIDKVIGQVGDNIVLYSELEGQKQSLKQNSAVPESIDQCVL 64 Query: 77 VQELIVETLKKQEIEKSGITFD-------SNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 +++++ L + E I +N + + G Sbjct: 65 LEQMLYNFLLVNQAELDSIQISDEQVDAEMENRLRVIENQMKNVKDDKGNPITIESFYGK 124 Query: 130 GDNHFKQYLAIQS---IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR---TV 183 + K+ + + V+ ME+ + ++ + Sbjct: 125 TKSQIKEEFRVTIKKRLQGQEVERGITADLDVSPMEVENFFNSIPKDSLPYINSQLSFQQ 184 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL--LESD 241 + P ++ QK+I + +S + F++ S Sbjct: 185 IAIFPKITKSDKEIAQKKIVEIRKSVVSGKMTMC-AAAFSNSDDPGSAKNCGRYEATRGM 243 Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276 + F+ + + T+ G ++ + D++ Sbjct: 244 MARTFEATAYSLKVGEISEVFETEFGFHFMQLIDRK 279 >gi|86749346|ref|YP_485842.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris HaA2] gi|86572374|gb|ABD06931.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris HaA2] Length = 350 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 28/263 (10%), Positives = 75/263 (28%), Gaps = 27/263 (10%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 + I + I+ +I +A L + L + Sbjct: 76 KADDIIARVGSTNISAEEIRGYVAALGER-DLAALRQ----------------------- 111 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 D N ++ N + E + D+Q + ++ + + Sbjct: 112 DPNLLSQAVRMMLANRLVMQEIAAKKWDQQPSVAEKLDRVRESAAVELYLQTVSTPPERF 171 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E ++ + + + K ++ K K E+ + +L Sbjct: 172 PSEDDLQRVYDANRAALLMPRQFELAQIFVALPKDADKAAEDKAKKSVEDIQRKLKAPGV 231 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276 A++ + + G ++ ES + P+ + + + S+N ++P G ++ + D + Sbjct: 232 DFAAVAAEAGNANGGALGWVAESQIRPEIRAKVMELSKNAVSDPIKLDDGWHFVKVLDTK 291 Query: 277 DLGGEIALKAYLSAQNTPTKIEK 299 + + Sbjct: 292 --APYTRTLPEVRDGLIAQIRTE 312 >gi|28870204|ref|NP_792823.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. tomato str. DC3000] gi|28853450|gb|AAO56518.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. tomato str. DC3000] Length = 93 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 25/80 (31%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 +++ + + + +S G + +F ++ + N Sbjct: 14 EEKCDELKTQIEGGADFAEVAKANSSCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPVNTV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|330875454|gb|EGH09603.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 93 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 24/80 (30%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 + + + + + +S G + +F ++ + N Sbjct: 14 EDKCNELKAQIEGGADFAEVAKANSSCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPVNTV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|313683491|ref|YP_004061229.1| hypothetical protein Sulku_2369 [Sulfuricurvum kujiense DSM 16994] gi|313156351|gb|ADR35029.1| hypothetical protein Sulku_2369 [Sulfuricurvum kujiense DSM 16994] Length = 277 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 83/296 (28%), Gaps = 29/296 (9%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 +I + +Y A + + IT +I + + +G + LI Sbjct: 3 LITLSTLLAAYLWSAPIGGVAVLVKNTPITLFEIQEEMK------QSGTSANQSADTLIR 56 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + L++ E ++ IT S +N + A LS E F + + + +S Sbjct: 57 KKLEQLEAQEKKITVSSAEINEELNRMAVQNKLSMEQFLNAMQTVRGLSEKDLRARVEES 116 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 I + + N+ ++ + + + + Sbjct: 117 IKGQKLYSSIAFSKMGQPTAEEENEYYQLHMDEFSRPESFEVTTYVSSSQEALTAKIADP 176 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 ES + + Q L K + + Sbjct: 177 MRHIESISSKDETIPYAKIN--------------------PQLAQLLNKIPNGSFSPVLP 216 Query: 263 TQ-KGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 G + DK ++ E ++ ++ K + +Y +LR +A I Sbjct: 217 NGKNGFMSFYMRDKLNVVTENLDTVRPQIANAILGEKRNQVLNDYFTRLRLSADIK 272 >gi|297733955|emb|CBI15202.3| unnamed protein product [Vitis vinifera] Length = 175 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 9/103 (8%), Positives = 31/103 (30%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R +L + + + + ++ + +++ G Sbjct: 74 TYVKARHILCEKQGKINEAYKKL-QDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLG 132 Query: 236 YLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRD 277 + + FQ++ + T+ P+ + G I +++ Sbjct: 133 WFPRGKMAGPFQDVAFSTVIGATSAPFKSTHGYHIILCEGRKN 175 >gi|240949547|ref|ZP_04753887.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus minor NM305] gi|240296120|gb|EER46781.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus minor NM305] Length = 624 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 19/245 (7%), Positives = 60/245 (24%), Gaps = 6/245 (2%) Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 I + +I +++ I S + R+ L+ + Q + Sbjct: 154 IVREGMIFSQIEEGIINTSFDLPAQQEALAKLLFQKRDVRLATYSLADEAKNQTVSPEEL 213 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + + + + ++ Q Y F Sbjct: 214 QSFYEAHKKQLLTPETFTVEYLVLTPKDVEKRIQITDEQIATYYDKNKAQFVTKGEANLA 273 Query: 195 QGFVQKRIKDAE--ESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK 251 V + + ++ ++ + G + F+N Sbjct: 274 HIQVANEAEANAIAQQLNNGADFATLAKEKSTDKLSAAQGGNLGWTKAGTFPQAFENAAS 333 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + P I + D++ ++ +K ++ + + + + Sbjct: 334 QLQVGQVSQPIKIDNAYHIIKVIDRKAENIIPLAQVKDKITETIRKELLASEYSTVARDM 393 Query: 309 RSNAI 313 ++A Sbjct: 394 ANSAF 398 Score = 40.8 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 67/238 (28%), Gaps = 20/238 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI---TDGDIS 57 M K + F L+ V + +NGE I T D Sbjct: 1 MIEKWHDRTNSL--GFKIIFTLVSLSFVLGGIGSGLVATDDSAVKVNGEGISQRTFTDAK 58 Query: 58 KRIALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 R + + G E + + LI + L +Q + + + + Sbjct: 59 NRQQNILYSQKGGEAWDLLDKPEYAREFNQSVLNSLINDELLRQYAKSLKLDVGVDQIKS 118 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 V A D + Y A + ++ + N ++P Sbjct: 119 EIVHDANFQQNGKFDNKLYQQTLRNAGLTTDGYAA--IVREGMIFSQIEEGIINTSFDLP 176 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 A ++ + + ++ +R +S+ D ++ E + +L ++ Sbjct: 177 AQQEALAKLLFQKRDVRLATYSLADEAKNQTVSPEELQSFYEAHKKQLLTPETFTVEY 234 >gi|225457367|ref|XP_002284794.1| PREDICTED: similar to peptidyl-prolyl cis-trans isomerase PPIC-type family protein isoform 1 [Vitis vinifera] Length = 144 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 9/103 (8%), Positives = 31/103 (30%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R +L + + + + ++ + +++ G Sbjct: 43 TYVKARHILCEKQGKINEAYKKL-QDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLG 101 Query: 236 YLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRD 277 + + FQ++ + T+ P+ + G I +++ Sbjct: 102 WFPRGKMAGPFQDVAFSTVIGATSAPFKSTHGYHIILCEGRKN 144 >gi|225457365|ref|XP_002284796.1| PREDICTED: similar to peptidyl-prolyl cis-trans isomerase PPIC-type family protein isoform 2 [Vitis vinifera] Length = 158 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 9/103 (8%), Positives = 31/103 (30%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R +L + + + + ++ + +++ G Sbjct: 57 TYVKARHILCEKQGKINEAYKKL-QDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLG 115 Query: 236 YLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRD 277 + + FQ++ + T+ P+ + G I +++ Sbjct: 116 WFPRGKMAGPFQDVAFSTVIGATSAPFKSTHGYHIILCEGRKN 158 >gi|254448800|ref|ZP_05062257.1| peptidyl-prolyl cis-trans isomerase D, putative [gamma proteobacterium HTCC5015] gi|198261641|gb|EDY85929.1| peptidyl-prolyl cis-trans isomerase D, putative [gamma proteobacterium HTCC5015] Length = 643 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 44/149 (29%), Gaps = 6/149 (4%) Query: 171 KNITVREYLIRTVLFSIPDNKLQN-QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HD 228 + + E +LF+ + ++ + V+ + ++ + Sbjct: 262 RYTSQEERSASHILFAFDSDADEDARAAVRSEAEQVLTQINEGGDFSALAKEHSDDPGSA 321 Query: 229 VSIGKAQYLLESDLHPQFQN--LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIAL 284 G + + + P+F+ + ++ +Q G I + + + Sbjct: 322 EQGGSLGVVQKGVMVPEFEQAVFNLPEEGAVSDLVESQFGYHIIRLDEYTPAEAQPFDEI 381 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 A + + K + ++ + A Sbjct: 382 SAKIRQELLDNKARLRYDSDIDEMSNLAF 410 Score = 44.7 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 30/234 (12%), Positives = 74/234 (31%), Gaps = 15/234 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + ++ + L+ L +F +VP++ M T++GE ++ ++R+ Sbjct: 1 MLLAIREKVTGAVALVIIA-ALGLFMVVPMLYDYVAGMGDNSAITVDGESVSIQQYNQRL 59 Query: 61 ALLKLQKIN------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + + + L K + I + L++Q G + + Sbjct: 60 SQNRQRLTQAFGGELPESFGDQLLAKRTTDQFIQQLLQEQATLNDGYAISDEDLVRVIQE 119 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + D ++ + Y Q++ V+ F P + Sbjct: 120 APQFQTDGQFDPEAYKRQLRSIGYSPALY--EQTMTKRFVQGQFQEGITQTAFVAPGQLE 177 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 +M + +E I + FS + + + E+ R + ++ Sbjct: 178 QMAALMHQERDIEYIAFSGEAFRSDIELSDAEIEAYFEDHREQFMHPEKVSVEY 231 Score = 37.7 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 3/51 (5%) Query: 269 YIAICDKRD---LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + DKR + + + Q +K A + +LR A I Sbjct: 583 VVKLLDKRPGQWEQLTQSEQEQIKQQLLASKGGMDYAAVLNQLREEADIDI 633 >gi|55980321|ref|YP_143618.1| peptidyl-prolyl cis-trans isomerase [Thermus thermophilus HB8] gi|55771734|dbj|BAD70175.1| peptidyl-prolyl cis-trans isomerse, PpiC family [Thermus thermophilus HB8] Length = 608 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 28/303 (9%), Positives = 67/303 (22%), Gaps = 26/303 (8%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISK-RIALLKLQKINGELEKIAVQELIVETLKKQ 88 + + +NG+ + + D+ + + L K V +E + Sbjct: 28 FTPQAAQQTRGKPVLWVNGKALYELDLLRLQGNDPLYAASPEGLLKTLVDTYFLEQVILT 87 Query: 89 EIEKS---GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 E K + S V + GL + Q + + + Sbjct: 88 EALKQDAARVRVSSAEVRQEVNRIREQFGLKDKAAYEQFLNQVGYTDAQLRAEVKTQLQI 147 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 E E+ + K E ++ + D L + Sbjct: 148 QKRLEQIRSGAKPTEEEVRFYYEVFKENYRTEPRVKARQIVVDDKALAEELA-------- 199 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF----------QNLLKKSQN 255 + + + G + + Sbjct: 200 -AKAKAGEDFAALARQHSK-VGAEQGGALGAGPGEAEPKPVTQVVFPTEVGEAVFALKGP 257 Query: 256 NTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 P + + + +K ++ K Y+++LR A Sbjct: 258 GVVGPIAAGGRYYIVKVEEYLPSTLPAFEEVKDRVAQDAERAKGNGVLEAYLEELRKKAQ 317 Query: 314 IHY 316 + + Sbjct: 318 VRF 320 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 29/294 (9%), Positives = 73/294 (24%), Gaps = 55/294 (18%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 +A + +N + I ++ + + + L + + EL V+ Sbjct: 324 NPYAYQNPPVAKVNEKEILLSEV---LQPVFSNQQTVALVQQGLGELAVQFFL------- 373 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 T ++ V+ AR +G + + Sbjct: 374 PQTLENLIDRELLVEAARKSG------------------KPFIGSKAEIAEAYLRYE--T 413 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 E E A + + + + + + + K + LR Sbjct: 414 RDVTASEEEARAFYSENPALFTVPASAKVIGVNF---------KEEAQAKAFRAAALRGG 464 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--------QNLLKKSQNNTTNPYVTQK 265 + + ++ + + L + + + + Sbjct: 465 DLEALAKA-----QEGTVTDYGTVNPNQLPAVLDRLVFKITETFPQGPLGEVSEVIKMED 519 Query: 266 G-VEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G + I D++ +L G + K + ++ LR A I Sbjct: 520 GSYTVLLISDRKAEELKGFAQVAEEARQGAVNRKRSEKAQALIQALREEAKIEN 573 >gi|309378643|emb|CBX22714.1| putative cell-binding factor [Neisseria lactamica Y92-1009] Length = 288 Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 80/305 (26%), Gaps = 25/305 (8%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK----INGE 71 + + + + S + T+NG+ I I ++A + + + + Sbjct: 1 MKAKILTSVALLACSGSLFAQT-----LATVNGQKIDSSVIDAQVAAFRAENSSAEDSPQ 55 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L + + + I T+ QE+++ + + + A + Sbjct: 56 LRRALLNQEITHTVVAQEVKRLKLDRSAEFKDMLAKLRAEAEKSGDDK---------KPS 106 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + E + A ++ ++ Sbjct: 107 FKTVWQAVEYGLNGRAYALHIAKTQPVSEQDAKAAYDNIRGFYKGTQEVQLGEILTDKED 166 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + + K ++ L+ + ++ V + E + P +Q + Sbjct: 167 NAKKAVAGLKAKKGFDAVLKQYSLNDHTKQTGKPDGYVPLKDL----EQGVPPLYQAIKD 222 Query: 252 KSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + T P + D+RD+ + Q T + V L Sbjct: 223 LKKGEFTATPLKNGDFYGVYYVNDRRDVKV--PSFDEMKEQLTGDLQAERIDRAVGALLD 280 Query: 311 NAIIH 315 A I Sbjct: 281 KADIK 285 >gi|330821358|ref|YP_004350220.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia gladioli BSR3] gi|327373353|gb|AEA64708.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia gladioli BSR3] Length = 264 Score = 63.5 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 23/185 (12%), Positives = 51/185 (27%), Gaps = 5/185 (2%) Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + ++ + E + + L+ + Sbjct: 67 HAELDDATLDALLARELTHLPKPTEADCRRYYTHHPERFRQGELVHASHILFAVTERVPL 126 Query: 196 GFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 +++R + A L P+ + ++ G LL D P+F+ L ++ Sbjct: 127 APLRERAEAALAEVLAAPERFEALARESSNCPSAAVGGSLGQLLRGDCVPEFEAALFGNE 186 Query: 255 --NNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 T+ G + I + +L A+ ++ +YV L Sbjct: 187 ALGVLPGLVNTRHGFHIVRIERRVPGELQPFEAVSGRIAGFLAERVRRDAMHQYVAILAG 246 Query: 311 NAIIH 315 A I Sbjct: 247 AARIE 251 >gi|240141517|ref|YP_002965997.1| putative peptidyl-prolyl cis-trans isomerse D [Methylobacterium extorquens AM1] gi|240011494|gb|ACS42720.1| putative peptidyl-prolyl cis-trans isomerse D [Methylobacterium extorquens AM1] Length = 634 Score = 63.5 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 35/403 (8%), Positives = 88/403 (21%), Gaps = 90/403 (22%) Query: 1 MTSKVFTSLSDFI-KLLTTYFVLIIFCIVPIVSYKSW--AMSSRIRTTINGEVITDGDIS 57 M + ++ ++ K++ + + V I + + SS T+ I+ ++ Sbjct: 1 MLQSIRSASQHWLGKVVLSVIFTFLIAGVAIFGVEEFFRGGSSTAVATVGKTPISAEEVR 60 Query: 58 KRIALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNT--- 101 + LE+ + +LI E Q+ G+ T Sbjct: 61 TAYQNQLQRYQAQLKRTLTPDQARAMGLERQVLAQLITEAALDQKTTDLGLAVSDATVLR 120 Query: 102 --------------VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + E + I + + + P Sbjct: 121 AIQDEPSFKNANGSFDRALFFQTLQRAGLNEAMFVREQRSVIARLQLADAIVAEMLVPQA 180 Query: 148 VKNDFMLKYG--------------------NLEMEIPANKQKMKNITVREYLIRTVLFSI 187 ++ + + A + K L + Sbjct: 181 IREAVHRYSTERRDAAVLTLAPSAAGEIPAPTDEALNAYYENNKASFRAPEYRSLNLLVL 240 Query: 188 PDNKLQNQGFV------------------QKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 L V +R + S K S Sbjct: 241 DPAALAKPDEVSDDEARKVYDANPGRFGKAERRTIQQISFPDEAAAAEARAKIESGESPF 300 Query: 230 SIG-----------KAQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 + +++L Q + P + G + + Sbjct: 301 ETVAADRGLDPKQLDLGTMTKAELFDPAVGNAAFALEQGKVSEPVKGRFGTVLLRVTAIE 360 Query: 277 D--LGGEIALKAYLSAQNTPTKIE----KHEAEYVKKLRSNAI 313 + +K + + ++ + ++ R++A Sbjct: 361 PGTVKPFDEVKDEIRKEIALKRVRDGGFDKVQDAIEDARASAK 403 >gi|170726976|ref|YP_001761002.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella woodyi ATCC 51908] gi|169812323|gb|ACA86907.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella woodyi ATCC 51908] Length = 270 Score = 63.5 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 26/296 (8%), Positives = 72/296 (24%), Gaps = 44/296 (14%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET 84 + + + ++NG +I + ++ + + + + A Q L+++ Sbjct: 1 MSLCGTNPSTTPSKERLPVISVNGVLIEETQLANELQYHPHGEF-DVVVQRAGQALVIQQ 59 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 L ++ K GI + Sbjct: 60 LLLEQAVKEGIDVSGESEEAGV-------------------------------------- 81 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK--RI 202 +++ + + + K T + + N + K + Sbjct: 82 QLLLQTQVKYDDPDEDDCLRYFKNNRDKFTTAPLMEVDHILLAAANDDLDARDDAKSDAM 141 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN-PY 261 + L + + + G + P+F+ L P Sbjct: 142 DIISTLKNDLKLFGELAKHHSVCPSKETGGSLGQISNGQTVPEFERQLMMLPEGLAEKPL 201 Query: 262 VTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++ G+ + + K + ++ + Y+ L A I Sbjct: 202 ESRYGLHVVNVARKVEGKALDYSLVQDKVRGYLVHRASHLAIQAYIHGLVQKADIQ 257 >gi|114799875|ref|YP_760276.1| putative peptidylprolyl cis-trans isomerase [Hyphomonas neptunium ATCC 15444] gi|114740049|gb|ABI78174.1| putative peptidylprolyl cis-trans isomerase [Hyphomonas neptunium ATCC 15444] Length = 372 Score = 63.5 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 21/192 (10%), Positives = 56/192 (29%), Gaps = 6/192 (3%) Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + ++ ++ +++ V+ + E + L + + Sbjct: 59 EPERNSEGQEETPEEALIRAVLNEEVDADPAADEAVRAVYDGNPEGFRSPPLLEASHILV 118 Query: 187 IPDNKLQN--QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LH 243 P + + + +K + + ++ G L D L Sbjct: 119 PPADASEEAYRAAREKARALIADLQANPSGFARMAASRSACPSASEGGSLGQLRPGDVLP 178 Query: 244 PQFQNLLKKSQNNT-TNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKH 300 P + L + P T+ G + + + D ++ +++ Q K Sbjct: 179 PIWTALTNMEEGTIRAEPVATEHGWHVLRLDHRSDGERLPFDYVRPHIALQLEARAWTKS 238 Query: 301 EAEYVKKLRSNA 312 A YV +L + + Sbjct: 239 AALYVDRLLAES 250 >gi|46579881|ref|YP_010689.1| peptidyl-prolyl cis-trans isomerase C [Desulfovibrio vulgaris str. Hildenborough] gi|120602653|ref|YP_967053.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio vulgaris DP4] gi|46449297|gb|AAS95948.1| peptidyl-prolyl cis-trans isomerase C [Desulfovibrio vulgaris str. Hildenborough] gi|120562882|gb|ABM28626.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio vulgaris DP4] gi|311234118|gb|ADP86972.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio vulgaris RCH1] Length = 94 Score = 63.5 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 7/79 (8%), Positives = 19/79 (24%), Gaps = 1/79 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 ++ + + + G + P+F + + Sbjct: 13 TEEACNELKTRIEGGEDFAEVARASSRCPSGKRGGDLGEFPRGAMVPEFDEAVFTGEVGK 72 Query: 257 TTNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 73 VLGPIRTQFGYHLVEVTSR 91 >gi|74317816|ref|YP_315556.1| hypothetical protein Tbd_1798 [Thiobacillus denitrificans ATCC 25259] gi|74057311|gb|AAZ97751.1| hypothetical protein Tbd_1798 [Thiobacillus denitrificans ATCC 25259] Length = 316 Score = 63.5 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 31/318 (9%), Positives = 83/318 (26%), Gaps = 58/318 (18%) Query: 13 IKLLTTYFVLIIFCIVPIVSY------KSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66 ++ + +V ++ + + +S++ +NG +T ++ + + Sbjct: 1 MQHIKKAYVSLVLAALVTGCGDKKEEAAADKPASQVAAKVNGTELTVHQVNYALQRIPNL 60 Query: 67 KINGE-------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 + + + QEL+V+ ++++++ Sbjct: 61 DKDQAKPASLQVVRNLVDQELVVQRALEEKLDRDPRVV---------------------- 98 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 Q + + + EI + + + Sbjct: 99 -------------QAVDSARRQILAEAYMARKLGTPSEPSDGEISEYFNSHPEMFAQRKI 145 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 R SI K ++ ++ +A ++ A V Sbjct: 146 YRLQEVSIQAPKEKHDAIRKQL--EASKTLNDFLAWLKAENLPAKVGQAVK-------PA 196 Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIE 298 L L + N G+ + + D + K ++ + Sbjct: 197 EQLPAAVLPKLAQMPNGQALVANAPNGLLVLVVADSQAQPVTLEQAKPAIARALQAETRQ 256 Query: 299 KHEAEYVKKLRSNAIIHY 316 K + L++NA I Y Sbjct: 257 KAAKAELDALKANAKIEY 274 >gi|300697132|ref|YP_003747793.1| isomerase [Ralstonia solanacearum CFBP2957] gi|299073856|emb|CBJ53380.1| putative isomerase [Ralstonia solanacearum CFBP2957] Length = 269 Score = 63.5 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 33/293 (11%), Positives = 78/293 (26%), Gaps = 54/293 (18%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94 + A+ + +NG +T + + IA Q ++ + Q+LI L +Q+ K+ Sbjct: 16 ADALPPGVIALVNGTQVTQAQLDRAIAQSGAQANP-QIAQALKQQLIARELFRQQAAKNP 74 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 V Q I +K++ Sbjct: 75 AYEKLPAVKLAM-----------------------------QEAHDAVITQAWLKDNIKP 105 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 E + ++ +EY R + Q +++ Sbjct: 106 APITDEQVKARYDAIVASLGDKEYKARVIQLGDDVTAAQVLELLKQ-----------GGD 154 Query: 215 DCNKLEKFASKIHDVSIGKAQYL---------LESDLHPQFQNLLKKSQNNT--TNPYVT 263 +++++ + V G ++ +L + T P Sbjct: 155 FAKLAQQYSTAPNKVRGGDMDWVSFKVPAEEGKTQNLPLPLAREIAALGIGATSTAPVEV 214 Query: 264 QKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + R + +K + ++E+ + V L A + Sbjct: 215 GSQRYIVKVEAARPTQVPAYDMVKPAIRQALESAELERVTVQVVGGLLKQAKV 267 >gi|188584391|ref|YP_001927836.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium populi BJ001] gi|179347889|gb|ACB83301.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium populi BJ001] Length = 634 Score = 63.5 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 38/403 (9%), Positives = 93/403 (23%), Gaps = 90/403 (22%) Query: 1 MTSKVFTSLSDFI-KLLTTYFVLIIFCIVPIVSYKSW--AMSSRIRTTINGEVITDGDIS 57 M + ++ ++ K++ T + V I + + SS T+ I+ ++ Sbjct: 1 MLQSIRSASQHWLGKVVLTVIFTFLIAGVAIFGVEEFFRGGSSTTVATVGKTPISAEEVR 60 Query: 58 KRIALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSN---- 100 + LE+ + +LI E Q+ G+ Sbjct: 61 TAYQNQLQRYQAQLKRTLTPDQARAMGLERQVLAQLITEAALDQKTADLGLAVSDAAVLR 120 Query: 101 -------------TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + + E + I + + P Sbjct: 121 AIQDEPSFKNANGSFDRALFFQTLQRAGLNEAMFVREQRSVIARLQLADAIVAELPVPQA 180 Query: 148 VKNDFMLKYG--------------------NLEMEIPANKQKMKNITVREYLIRTVLFSI 187 ++ E E+ A K L + Sbjct: 181 MREAVHRYSTERRDAAVLTLAPSVAGEIPAPTEEELSAYYDNNKASFRAPEYRSLNLLVL 240 Query: 188 PDNKLQNQGFV--QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG------------- 232 L V ++ K + + R K + + S + + Sbjct: 241 DPAALAKPDEVSEEEARKVYDANHSRFGKPERRTIQQISFPDEAAAKEARAKIESGETPF 300 Query: 233 --------------KAQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 L +++L Q + P + G + + Sbjct: 301 ETVAAARGLDPKQLDLGTLTKAELFDPAVGDAAFALEQGKVSEPVKGRFGTVLLRVTAIE 360 Query: 277 D--LGGEIALKAYLSAQNTPTKIE----KHEAEYVKKLRSNAI 313 + +K + + ++ + ++ R++A Sbjct: 361 PGTVKPFDEVKDEIRREIALKRVRDGGFDKVQDAIEDARASAK 403 >gi|146281972|ref|YP_001172125.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas stutzeri A1501] gi|145570177|gb|ABP79283.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas stutzeri A1501] gi|327480218|gb|AEA83528.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas stutzeri DSM 4166] Length = 93 Score = 63.5 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 8/81 (9%), Positives = 26/81 (32%), Gaps = 1/81 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257 + + + + + ++ ++ G + +F ++ + N Sbjct: 13 TEAKCNELKAAIEGGADFAQVAKENSTCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPLNV 72 Query: 258 T-NPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 73 VQGPVKTQFGYHLLEVTSRQD 93 >gi|284035739|ref|YP_003385669.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirosoma linguale DSM 74] gi|283815032|gb|ADB36870.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirosoma linguale DSM 74] Length = 797 Score = 63.5 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 27/291 (9%), Positives = 66/291 (22%), Gaps = 27/291 (9%) Query: 52 TDGDISKRIALLKLQKINGELEKIAV-QELIVETLKKQEIEKSGITF-----------DS 99 T + + + Q L + + L E ++ + + + D+ Sbjct: 89 TTEAFREEMNTYRKQLAQSYLTDKVLVESLAAEAYQRMQEDVNASHIFIPVSEYAQPSDT 148 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----NDFMLK 155 + + + + + V + Sbjct: 149 LVAYQTIMSLRKQALEGTDFTKLARENSKDVKTAQNGGSLGYIAAFENVYPLETAAYTTP 208 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD-------NKLQNQGFVQKRIKDAEES 208 + M + R + Q Q+RI Sbjct: 209 VNGISMPVRTRFGYHILKVNNRRPSRGRVRVAHILVRMSPAADEAGQKAAQERINKVYAQ 268 Query: 209 RLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQK 265 R + + G P F++ + + P T Sbjct: 269 LQRGESFEQVCRLVSDDATSKANGGVLPPFEPGRWVPAFEDAAFALSKPGDYSKPVKTNY 328 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIH 315 G I + +++ L L L + T ++ + V++L+ + Sbjct: 329 GWHIIKLIERKGLESFTTLAPSLRQRVTTDSRADMLRQVTVQRLQKEYPVQ 379 >gi|127513432|ref|YP_001094629.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella loihica PV-4] gi|126638727|gb|ABO24370.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella loihica PV-4] Length = 621 Score = 63.5 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 23/260 (8%), Positives = 59/260 (22%), Gaps = 8/260 (3%) Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV--NYFFVQHARN 112 + + + + V ++ + T Y V Sbjct: 144 QLGYQANSFRDMMRGDMTRRQLVVTVVGSEFVLPGEAEYLAKIQGQTRDIRYHVVDAEPM 203 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + F + I + ++ N + E + K Sbjct: 204 LATVSVSDEEANTYYQQNQSLFVRPETISLDYIELSANQLASAIQVSDEEAKTYYDENKA 263 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSI 231 ++ + ++ + + + + Sbjct: 264 QYLQPEKRLAAHILVSLGDDEDAAKAKAEAIMTK--LKAGEDFEALAKSDSDDSFSGEQG 321 Query: 232 GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYL 288 GK + + + F L + ++ T G I + D + A+K + Sbjct: 322 GKLDWFEQGVMEAPFDQALFALEKGQYSDIVKTSFGYHIIKLLDLQAASTSPFEAVKDKI 381 Query: 289 SAQNTPTKIEKHEAEYVKKL 308 AQ K ++L Sbjct: 382 VAQIQQDKAVNEFYTLQQRL 401 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 26/238 (10%), Positives = 66/238 (27%), Gaps = 19/238 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ I V++ F + SY + T+NGE I+ + + Sbjct: 1 MLEKIREGSQGVIAKGILVLVILSFAFTGVSSYLGSSSEPS-AATVNGEEISKSALEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + +++ ++ LI + L Q G+T + Sbjct: 60 QSERARLEQQLGDMYDTLASNESYLASVKQNVLERLIADKLVDQAAADLGLTVSDQQIKT 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + D +L + + D+ + ++ E +P Sbjct: 120 AIMNEPAFQTDGKFDNDRYLALIRQLGYQANSF--RDMMRGDMTRRQLVVTVVGSEFVLP 177 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + I + IR + ++ ++++ + + Sbjct: 178 GEAEYLAKIQGQTRDIRYHVVDAEPMLATVSVSDEEANTYYQQNQSLFVRPETISLDY 235 >gi|123440559|ref|YP_001004553.1| peptidyl-prolyl cis-trans isomerase C [Yersinia enterocolitica subsp. enterocolitica 8081] gi|238750649|ref|ZP_04612148.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia rohdei ATCC 43380] gi|238759819|ref|ZP_04620976.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia aldovae ATCC 35236] gi|332159789|ref|YP_004296366.1| peptidyl-prolyl cis-trans isomerase C [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122087520|emb|CAL10301.1| peptidyl-prolyl cis-trans isomerase C [Yersinia enterocolitica subsp. enterocolitica 8081] gi|238701962|gb|EEP94522.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia aldovae ATCC 35236] gi|238711039|gb|EEQ03258.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia rohdei ATCC 43380] gi|318607672|emb|CBY29170.1| peptidyl-prolyl cis-trans isomerase ppiC [Yersinia enterocolitica subsp. palearctica Y11] gi|325664019|gb|ADZ40663.1| peptidyl-prolyl cis-trans isomerase C [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859832|emb|CBX70164.1| peptidyl-prolyl cis-trans isomerase C [Yersinia enterocolitica W22703] Length = 93 Score = 63.5 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 1/76 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +K+ D +KF++ + G + D+ P F + + Sbjct: 15 EKQANDILAQLNNGANFQELAKKFSNCPSKRNGGDLGEFNKGDMVPAFDKAVFSCELLQP 74 Query: 258 TNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 75 YGPVKTQFGYHIIKVL 90 >gi|238798858|ref|ZP_04642326.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia mollaretii ATCC 43969] gi|238717308|gb|EEQ09156.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia mollaretii ATCC 43969] Length = 98 Score = 63.5 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 1/76 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +K+ D +KF++ + G + D+ P F + + Sbjct: 20 EKQANDILAQLNNGADFQELAKKFSNCPSKRNGGDLGEFNKGDMVPAFDKAVFSCELLQP 79 Query: 258 TNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 80 YGPVKTQFGYHIIKVL 95 >gi|325277737|ref|ZP_08143302.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas sp. TJI-51] gi|324097130|gb|EGB95411.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas sp. TJI-51] Length = 93 Score = 63.5 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 8/82 (9%), Positives = 24/82 (29%), Gaps = 1/82 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 + + + + + ++ G + +F ++ + N Sbjct: 12 ASEDKCNELKAQIEAGADFAEIAKANSTCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPVN 71 Query: 256 NTTNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 72 TVQGPVKTQFGYHLLEVTSRQD 93 >gi|93278583|pdb|1ZK6|A Chain A, Nmr Solution Structure Of B. Subtilis Prsa Ppiase Length = 93 Score = 63.5 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 29/80 (36%), Gaps = 2/80 (2%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL-LESDLHPQF-QNLLKKSQ 254 +K ++ E+ + K + +++++ G + E + F + K Sbjct: 13 ADKKTAEEVEKKLKKGEKFEDLAKEYSTDSSASKGGDLGWFAKEGQMDETFSKAAFKLKT 72 Query: 255 NNTTNPYVTQKGVEYIAICD 274 ++P TQ G I + Sbjct: 73 GEVSDPVKTQYGYHIIKKTE 92 >gi|89891030|ref|ZP_01202538.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteria bacterium BBFL7] gi|89516674|gb|EAS19333.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteria bacterium BBFL7] Length = 658 Score = 63.5 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 25/225 (11%), Positives = 59/225 (26%), Gaps = 5/225 (2%) Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 N++ A + L+ F + + Sbjct: 148 WNKINSIKNELDNGADFSQLARTKSEGPSAGNEGKLGWFSVFRMVYPFENAAFNTPVGKH 207 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + + K+ + D + ++ KRI+D + K Sbjct: 208 SDIFRTDFGYHIVKVFEDRPARGEVTVSHIMTFDARDASEKTAAKRIQDVYKQLQESGKF 267 Query: 216 CNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLKK---SQNNTTNPYVTQKGVEYIA 271 +F+ + GK L+ + + + + P+ ++ G + Sbjct: 268 EELAREFSDDMSSASRGGKLDRFGTGGLNAPVFEDIAFGLEEKGSYSAPFKSKFGWHIVK 327 Query: 272 ICDKRDLGGEIALKAYLSAQNT-PTKIEKHEAEYVKKLRSNAIIH 315 + +K +G L L + + K + K LR + Sbjct: 328 LIEKHPVGSYEELAPSLKEKIRKSPRARKITDSFNKGLREKYNVK 372 >gi|238755780|ref|ZP_04617112.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia ruckeri ATCC 29473] gi|238706007|gb|EEP98392.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia ruckeri ATCC 29473] Length = 93 Score = 63.5 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 1/76 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +K+ D +K ++ + G + D+ P F + + Sbjct: 15 EKQANDILAQLNNGANFQELAKKHSNCPSKRNGGDLGEFNKGDMVPAFDKAVFSCELLQP 74 Query: 258 TNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 75 YGPVKTQFGYHIIKVL 90 >gi|26989798|ref|NP_745223.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida KT2440] gi|148547861|ref|YP_001267963.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida F1] gi|170721885|ref|YP_001749573.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida W619] gi|24984695|gb|AAN68687.1|AE016497_12 peptidyl-prolyl cis-trans isomerase C [Pseudomonas putida KT2440] gi|148511919|gb|ABQ78779.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida F1] gi|169759888|gb|ACA73204.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida W619] gi|313498898|gb|ADR60264.1| PpiC [Pseudomonas putida BIRD-1] Length = 93 Score = 63.5 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 24/80 (30%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 + + + + + ++ G + +F ++ + N Sbjct: 14 EDKCNELKAQIEAGADFAEIAKANSTCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPVNTV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|302753416|ref|XP_002960132.1| hypothetical protein SELMODRAFT_74131 [Selaginella moellendorffii] gi|300171071|gb|EFJ37671.1| hypothetical protein SELMODRAFT_74131 [Selaginella moellendorffii] Length = 148 Score = 63.2 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 12/103 (11%), Positives = 31/103 (30%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R VL +Q + + + +F+ G Sbjct: 47 TYVKARHVLCEKQGRINDAYKKLQDGWINNGDKVP-PAEFAKVAAEFSECPSGKKGGDLG 105 Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277 + + FQ + + +T+ P+ + G +I + +++ Sbjct: 106 WFPRGKMAGPFQEVAFSTPVGSTSAPFKSTHGYHFILVEGRKN 148 >gi|46199933|ref|YP_005600.1| hypothetical protein TTC1631 [Thermus thermophilus HB27] gi|46197560|gb|AAS81973.1| hypothetical conserved protein [Thermus thermophilus HB27] Length = 608 Score = 63.2 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 28/303 (9%), Positives = 67/303 (22%), Gaps = 26/303 (8%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISK-RIALLKLQKINGELEKIAVQELIVETLKKQ 88 + +NG+ + + D+ + + L K V +E + Sbjct: 28 FTPQAGQQTRGKPVLWVNGKALYELDLLRLQGNDPLYAASPEGLLKTLVDTYFLEQVILT 87 Query: 89 EIEKS---GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 E K + S V + GL + Q + + + Sbjct: 88 EALKQDAARVRVSSAEVRQEVNRIREQFGLKDKAAYEQFLNQVGYTDAQLRAEVKTQLQI 147 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 E E+ + K E ++ + D L + + Sbjct: 148 QKRLEQIRSGAKPTEEEVRFYYEVFKENYRTEPRVKARQIVVDDKALAEELAAK------ 201 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK----------SQN 255 + + + G ++ Sbjct: 202 ---AKAGEDFAALARQHSK-VGAEQGGALGAGPGEAEPKPVTQVVFPTEVGEAVFALKGP 257 Query: 256 NTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 P + + + +K ++ K Y+++LR A Sbjct: 258 GVVGPIAAGGRYYIVKVEEYLPSTLPAFEEVKDRVAQDAERAKGNGVLEAYLEELRKKAQ 317 Query: 314 IHY 316 + + Sbjct: 318 VRF 320 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 29/294 (9%), Positives = 73/294 (24%), Gaps = 55/294 (18%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 +A + +N + I ++ + + + L + + EL V+ Sbjct: 324 NPYAYQNPPVAKVNEKEILLSEV---LQPVFSNQQTVALVQQGLGELAVQFFL------- 373 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 T ++ V+ AR +G + + Sbjct: 374 PQTLENLIDRELLVEAARKSG------------------KPFIGSKAEIAEAYLRYE--T 413 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 E E A + + + + + + + K + LR Sbjct: 414 RDVTASEEEARAFYSENPALFTVPASAKVIGVNF---------KEEAQAKAFRAAALRGG 464 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--------QNLLKKSQNNTTNPYVTQK 265 + + ++ + + L + + + + Sbjct: 465 DLEALAKA-----QEGTVTDYGTVNPNQLPAVLDRLVFKITETFPQGPLGEVSEVIKMED 519 Query: 266 G-VEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G + I D++ +L G + K + ++ LR A I Sbjct: 520 GSYTVLLISDRKAEELKGFAQVAEEARQGAVNRKRSEKAQALIQALREEAKIEN 573 >gi|331000013|ref|ZP_08323709.1| PPIC-type PPIASE domain protein [Parasutterella excrementihominis YIT 11859] gi|329573161|gb|EGG54778.1| PPIC-type PPIASE domain protein [Parasutterella excrementihominis YIT 11859] Length = 270 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 29/300 (9%), Positives = 89/300 (29%), Gaps = 49/300 (16%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQ 78 VL F + ++ A ++ T+NG+ ++ + + + L+ +L+ A Sbjct: 5 VLKSFVLAAALAGVLPAAVAQTAFTVNGQFVSVEEQKQLMDFLRANGVTNEKQLKNAARS 64 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 L+ + + +Q G+ D + A+ Sbjct: 65 ILLEQKIIEQAARNEGLLEDPRVRVLISEKQAQ--------------------------- 97 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 ++ ++ + ++ E ++ + + + + + + Sbjct: 98 ----LYGSILSRRYASEHPITEEQVRNRYDSLLSSYDPHEIKFRHILVKTPEEAREIIQS 153 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLL-ESDLHPQFQNLLKKSQNN 256 K + ++ + + G+ + + L P + Q Sbjct: 154 LKV----------GSDFGSLAKERSLDQSTSQNGGQIPFTNIRNVLVPGLAEAILALQPG 203 Query: 257 --TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P+ ++ G + + +KR++ + + E++ L+ +A I Sbjct: 204 DLLPVPFKSKLGYHVVLLEEKREVPF--PSYEEVKPKVLSELERLQTTEFLNDLQKDAKI 261 >gi|322379060|ref|ZP_08053463.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter suis HS1] gi|321148552|gb|EFX43049.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter suis HS1] Length = 267 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 29/242 (11%), Positives = 64/242 (26%), Gaps = 9/242 (3%) Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + KQ ++ A N L + Q Sbjct: 25 DFDVIKQRNPNFDFNKLKPEQKKALLEQAINNLLIEREAKKEKLDDTAEFAKRMAGYKKQ 84 Query: 142 SI---WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + W + + + +E R +L + + + Sbjct: 85 LLVEIWAKHQAEAIGKEDIPEDQLRKYYQDNKTQFVQQEAKARHILVKTEADAKRVISEL 144 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNT 257 K K E N+ + + + G ++ + P+F N + + Sbjct: 145 NKTPKTRIEK--EFIDIANRESIDPNTKNSKNGGDLGKFQKNQMAPEFSNAVFALKPGSY 202 Query: 258 TN-PYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T P T+ G I + K + + + + +++ ++KLR N I Sbjct: 203 TKTPVKTEFGYHVIYLMSKNEPKTPTFEQARQTIIGILKEHQFQEYVKGELEKLRKNVRI 262 Query: 315 HY 316 + Sbjct: 263 NI 264 >gi|255014827|ref|ZP_05286953.1| parvulin-like peptidyl-prolyl isomerase [Bacteroides sp. 2_1_7] Length = 522 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 13/150 (8%), Positives = 44/150 (29%), Gaps = 4/150 (2%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-S 224 K R ++ ++ D+ +Q+ + + + ++++ Sbjct: 218 KVHSRKPNPGRVHVAHILIAFPKDSAIQDSSAFLAKAQAIYKQVQEGADFGELAKEYSGD 277 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 G + ++ F+ + + T+ G I + DK+ Sbjct: 278 AASAKKEGVLPWFGVGEMVQPFEQAAFALSKPGDLSEVVETRFGYHIIKLIDKKGRPSFE 337 Query: 283 ALKAYLSAQNTPTKIE-KHEAEYVKKLRSN 311 + LS + + + + +++ Sbjct: 338 EEEKALSRRMGQGERNFELYKAFDDRMKKE 367 Score = 40.8 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 27/262 (10%), Positives = 58/262 (22%), Gaps = 40/262 (15%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 +LI + V+ + S + T+ G+ + + Sbjct: 4 LLISLGVFACVTVNAQTASDSVVMTVAGKQVPLSEF------------------------ 39 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + + +V+ +N L + S Q Sbjct: 40 -----IFIAEKNGEVDLSNTKSVKNYVELFKNFKLKVAEAESLGIDQTSSFKSELDGYRA 94 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q + E E A + L + ++ V + Sbjct: 95 QL---------IDSYMSDKEGEKAAARAVYDRGDHSVELTHILFRLPEKTVSKDTVAVYQ 145 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY--LLESDLHPQFQNLLKKSQNNTT 258 E + + A K + + L L + Sbjct: 146 EAMRVYERLQKGEDMETVGKALAEKDKEHVACEYVRCLLPMQSLKVFEDAAYSLPIGVVS 205 Query: 259 NPYVTQKGVEYIAICDKRDLGG 280 P T+ G I + ++ G Sbjct: 206 EPVRTKLGFHLIKVHSRKPNPG 227 >gi|207723025|ref|YP_002253444.1| ppic-type peptidyl-prolyl cis-trans isomerase protein [Ralstonia solanacearum MolK2] gi|206588214|emb|CAQ18779.1| ppic-type peptidyl-prolyl cis-trans isomerase protein [Ralstonia solanacearum MolK2] Length = 268 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 32/286 (11%), Positives = 75/286 (26%), Gaps = 54/286 (18%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 + +NG +T + + IA Q ++ + Q+LI L +Q+ K+ Sbjct: 22 VIALVNGTQVTQAQLDRAIAQSGAQANP-QIAQALKQQLIARELFRQQAAKNPAYEKLPA 80 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 V Q I +K++ E Sbjct: 81 VKLAM-----------------------------QEAHDAVITQAWLKDNIKPAPITDEQ 111 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + ++ +EY R + Q +++ ++ Sbjct: 112 VKARYDAIVASLGDKEYKARVIQLGDDVTAAQVLALLKQ-----------GGDFAKLAQQ 160 Query: 222 FASKIHDVSIGKAQYL---------LESDLHPQFQNLLKKSQNNT--TNPYVTQKGVEYI 270 +++ + V G ++ +L + T P + Sbjct: 161 YSTAPNKVRGGDMDWVSFKVPAEEGKTQNLPLPLAREIAALGIGATSTAPVEVGSQRYIV 220 Query: 271 AICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + R + +K + ++E+ + V L A + Sbjct: 221 KVEAARPTQVPAYDTVKPAIRQALESAELERVTVQVVGGLLKQAKV 266 >gi|329119300|ref|ZP_08247987.1| peptidyl-prolyl cis-trans isomerase [Neisseria bacilliformis ATCC BAA-1200] gi|327464647|gb|EGF10945.1| peptidyl-prolyl cis-trans isomerase [Neisseria bacilliformis ATCC BAA-1200] Length = 603 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 34/382 (8%), Positives = 89/382 (23%), Gaps = 75/382 (19%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI------------- 51 +F ++ + LI V + A S + GE I Sbjct: 1 MFATVEKYSGPAKIMLGLIALTFVGFGAGGIIATGSDYIVKVGGEKISTQNVQEAQREQN 60 Query: 52 ----------------------------TDGDISK----------------RIALLKLQK 67 ++ + + + Sbjct: 61 LGSGQDALAYLTERAYLAEGAKMMGIGVSEAQLKQVIVDDPGFHDENGRFSEAKFRLFLQ 120 Query: 68 INGELEKIAVQELIVETLKKQEIE-----------KSGITFDSNTVNYFFVQHARNTGLS 116 G E+ ++ L + + ++ + A + Sbjct: 121 QGGLTEERFLENLRNSFALQNLVNLAGGGNIVSSAQAEQYAALMLADREIRSIALDPKTF 180 Query: 117 AEDFSSFLDKQGIGDNHFKQYLA-IQSIWPDVVK---NDFMLKYGNLEMEIPANKQKMKN 172 A + + K Q++ ++ E E+ ++ + Sbjct: 181 AAQIKADDAALKAYYDKDKSKYRLPQAVKYQYIELSPRTLAESQKVGEDELKKAFEEQQK 240 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + ++ + + + +K + +A+ + + + K + A + G Sbjct: 241 NAAPTREVAHIMLKTEGDAAKTKAEAEKILAEAKAAPEKFAELAAKYSQDAG--TAQTGG 298 Query: 233 KAQYLLESD-LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 + + L F+ + + + + + R K L A Sbjct: 299 SLGAVGKDSPLPEAFKTAVSALGQGDIALVEGEGAFHIVRVGNVRSGLSFEEAKPALEAA 358 Query: 292 NTPTKIEKHEAEYVKKLRSNAI 313 K + A+ LR A Sbjct: 359 LKEKKAREAVAKTRDTLRQIAF 380 >gi|254360504|ref|ZP_04976653.1| peptidylprolyl isomerase [Mannheimia haemolytica PHL213] gi|153091044|gb|EDN73049.1| peptidylprolyl isomerase [Mannheimia haemolytica PHL213] Length = 623 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 15/251 (5%), Positives = 53/251 (21%), Gaps = 13/251 (5%) Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH--ARNTGLSAEDFSSFLD 125 G L+ + +I + + A+ Sbjct: 156 QEGMLQSQLQEGIINSDFNVPAQQALLAKLLLQQREVRLAEFSVAKEMENQTASEQELRA 215 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + + + D K +I + K V + Sbjct: 216 YYEANKTKLLAPEKLAVEYVTLSPKDVESKVEITNEQIQTYYDRNKADYVTKGEAHLAHI 275 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 + + + + + K + + + G + Sbjct: 276 QVASEAEAQAIEQALKNGEDFATLAKN--------KSSDTLSANNGGDLGWAKAGTFPKA 327 Query: 246 FQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEA 302 F++ + + + I + +++ +K ++ + Sbjct: 328 FEDAVANLTAGQMSAAVKVDNAYHIIKVLERKPEQVIELAQVKDKIAQTIRQELVLTEYF 387 Query: 303 EYVKKLRSNAI 313 +++ + A Sbjct: 388 TVAREMANKAF 398 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 26/238 (10%), Positives = 69/238 (28%), Gaps = 20/238 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + + F L+ V +NGE I+ + + Sbjct: 1 MIEKMHERTNGPV--FKIIFALVSISFVIGGIGTGLISQDNSVAKVNGEEISQQLFNNTL 58 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + + LI E L +Q ++ + ++ + Sbjct: 59 NREQNRLNAELGSRFWDLMDSPEYAAQFNQSVLNGLIDEELLRQYAKELKLGISADQIKS 118 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 V + + Y A + ++++ N + +P Sbjct: 119 EIVNSQMFQQDGKFSNELYQQTLRHNNLSADGYAA--IVQEGMLQSQLQEGIINSDFNVP 176 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 A + + + +++ +R FS+ Q+ E ++ +L ++ Sbjct: 177 AQQALLAKLLLQQREVRLAEFSVAKEMENQTASEQELRAYYEANKTKLLAPEKLAVEY 234 >gi|83311573|ref|YP_421837.1| parvulin-like peptidyl-prolyl isomerase [Magnetospirillum magneticum AMB-1] gi|82946414|dbj|BAE51278.1| Parvulin-like peptidyl-prolyl isomerase [Magnetospirillum magneticum AMB-1] Length = 106 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 9/89 (10%), Positives = 24/89 (26%), Gaps = 1/89 (1%) Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + +++ I + +E + +++ G + + P+F Sbjct: 18 MRSQATRSKDEALTEINNIKEEINQGADFGQMARQYSDCPSSEDGGDLGEFPKGAMVPEF 77 Query: 247 QNLLKK-SQNNTTNPYVTQKGVEYIAICD 274 + + T G I D Sbjct: 78 EVAAFALKSGEVSGVVETPFGFHLIQRTD 106 >gi|150008996|ref|YP_001303739.1| parvulin-like peptidyl-prolyl isomerase [Parabacteroides distasonis ATCC 8503] gi|149937420|gb|ABR44117.1| parvulin-like peptidyl-prolyl isomerase [Parabacteroides distasonis ATCC 8503] Length = 522 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 13/150 (8%), Positives = 44/150 (29%), Gaps = 4/150 (2%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-S 224 K R ++ ++ D+ +Q+ + + + ++++ Sbjct: 218 KVHSRKPNPGRIHVAHILIAFPKDSAIQDSSAFLAKAQAIYKQVQEGADFGELAKEYSGD 277 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 G + ++ F+ + + T+ G I + DK+ Sbjct: 278 AASAKKEGVLPWFGVGEMVQPFEQAAFALSKPGDLSEVVETRFGYHIIKLIDKKGRPSFE 337 Query: 283 ALKAYLSAQNTPTKIE-KHEAEYVKKLRSN 311 + LS + + + + +++ Sbjct: 338 EEEKALSRRMGQGERNFELYKAFDDRMKKE 367 Score = 40.8 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 27/262 (10%), Positives = 58/262 (22%), Gaps = 40/262 (15%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 +LI + V+ + S + T+ G+ + + Sbjct: 4 LLISLGVFACVTVNAQTASDSVVMTVAGKQVPLSEF------------------------ 39 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + + +V+ +N L + S Q Sbjct: 40 -----IFIAEKNGEVDLSNTKSVKNYVELFKNFKLKVAEAESLGIDQTSSFKSELDGYRA 94 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q + E E A + L + ++ V + Sbjct: 95 QL---------IDSYMSDKEGEKAAARAVYDRGDHSVELTHILFRLPEKTVSKDTVAVYQ 145 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY--LLESDLHPQFQNLLKKSQNNTT 258 E + + A K + + L L + Sbjct: 146 EAMRVYERLQKGEDMETVGKALAEKDKEHVACEYVRCLLPMQSLKVFEDAAYSLPIGVVS 205 Query: 259 NPYVTQKGVEYIAICDKRDLGG 280 P T+ G I + ++ G Sbjct: 206 EPVRTKLGFHLIKVHSRKPNPG 227 >gi|152991383|ref|YP_001357105.1| hypothetical protein NIS_1642 [Nitratiruptor sp. SB155-2] gi|151423244|dbj|BAF70748.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 279 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 90/284 (31%), Gaps = 26/284 (9%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 + I +N E IT +I+K I L + A+Q LI E L+ ++I+K Sbjct: 15 SYGKIIDGIAVIVNDEPITLYEINKVINTTGLS------RREAIQLLIREKLENEQIKKL 68 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 G+T D ++ + A+ G + QG FK+ L Q + + Sbjct: 69 GVTVDDIELDQALEKIAKQKGTDLFGLQEAIISQGGDWEKFKEGLRKQLLRKKL-YAALT 127 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E + + E + + + + + L Sbjct: 128 RQQTQKLSEKDLKEYYETHKNEFEIAKEADIVKYISPSKEVLAKIAQNPLYQPSNNALLQ 187 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273 K K+ Q + L + + + T I I Sbjct: 188 KGEEKI-------------DLQKVN----PQFAYLLNQTPEGSFTKILPMGDKYLLIYIK 230 Query: 274 DK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K ++ K Y+ + + T K+ EY KL+++A I Sbjct: 231 HKYGKEYIPFEEAKGYILNRLSKTSGVKNVKEYFDKLKASANIK 274 >gi|56461511|ref|YP_156792.1| parvulin-like peptidyl-prolyl isomerase [Idiomarina loihiensis L2TR] gi|56180521|gb|AAV83243.1| Parvulin-like peptidyl-prolyl isomerase [Idiomarina loihiensis L2TR] Length = 92 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 20/80 (25%), Gaps = 1/80 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN- 255 + + +E + K K + G + P F ++ Sbjct: 12 ETKDEAEKLKEQLTKGAKFAELARKHSLCPSGKKGGDLGEFSRGQMVPAFDKVVFGKPTL 71 Query: 256 NTTNPYVTQKGVEYIAICDK 275 P TQ G I + Sbjct: 72 EVHGPVKTQFGWHLIKTLSR 91 >gi|330968107|gb|EGH68367.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. actinidiae str. M302091] Length = 93 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 24/80 (30%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 + + + + + +S G + +F ++ + N Sbjct: 14 EDKCNELKTQIEGGADFAEVAKANSSCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPVNTV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|167622122|ref|YP_001672416.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella halifaxensis HAW-EB4] gi|167352144|gb|ABZ74757.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella halifaxensis HAW-EB4] Length = 271 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 21/221 (9%), Positives = 58/221 (26%), Gaps = 4/221 (1%) Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 N F + G + +++ Q I + + Sbjct: 37 QYHSNSDFDVVVQQAGQTLVIRQLLIEQAKQNGVDVTADNEEQGIGQLLADKVVYQEPSE 96 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + + K +T + +L + + ++ ++ + + Sbjct: 97 EDCLRYFQNNREKFVTAPLLEVDHILLPASAEDEEAKEVARQNAENILVQLSQDISCFAE 156 Query: 219 -LEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276 +K+++ + G + P+F+ ++ + P ++ G + I K Sbjct: 157 LAKKYSACPSKETGGSLGQISSGQTVPEFEQQLMQHGEGLVEQPLASRYGFHVVNIARKV 216 Query: 277 DLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 D + + Y+ L A I Sbjct: 217 DGKQLDYNMVADKVKGYLVHRASRLAIQAYIHGLVEVAEIE 257 >gi|283851044|ref|ZP_06368329.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio sp. FW1012B] gi|283573690|gb|EFC21665.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio sp. FW1012B] Length = 650 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 17/200 (8%), Positives = 52/200 (26%), Gaps = 9/200 (4%) Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + F I+ + + + +I + + + + Sbjct: 208 DQIKAYYEARKDQFATPAQIRIDYVEFTPKALAKPAEVTDADIETAYKANQKKYAKPEQV 267 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI---GKAQYL 237 R F + + V ++ +L + ++ +L Sbjct: 268 RVRHFLVMLPADAPKEAVDAATAKLKDLAAKLKAGADFASLLPKNPNNPEGLIGEDWAWL 327 Query: 238 LESDLHPQF----QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQ 291 + L +F + ++ P T G+ I + + G + +K + + Sbjct: 328 PKGSLPKEFGAFEEKAFSLKKDEIGEPVRTALGLHLIQAGEHQAAGEKTLAEVKDEIRSD 387 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 K + + ++ Sbjct: 388 LAEQKAADKLTKALDTIQEK 407 Score = 55.8 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 26/325 (8%), Positives = 70/325 (21%), Gaps = 42/325 (12%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + ++++F + S++ + TI+G+ + D K Sbjct: 1 MLDPMRKYAQSWGIKIVFGLIILVFVFWGVGSFQGDKA--TVLATIDGQPVLIKDYEKAY 58 Query: 61 ALLKLQKINGE------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 N ++ L + + K GI + + Sbjct: 59 QENLRLVKNKNPNVTDKDLQDGGFRWQVFSNMVTTRLLEDQAAKLGIAVSPEELRAEIAK 118 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 S + + + ++ +++ + Sbjct: 119 IPAFQNESKQFDAKRYENLLQANDVTPGEFEADFRQNLLLE-KLAAYVSLPAAVTDTEAR 177 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + + I + F D + E + + + Sbjct: 178 SIFDFMREQATIHYIPFKTEDFTKGVAPTADQIKAYYEARKDQFATPAQIRIDYV----- 232 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP-YVTQKGVEYIAICDKRDLGGEIALKAY 287 +F T+ T K+ E + Sbjct: 233 ----------------EFTPKALAKPAEVTDADIETAY-----KANQKKYAKPEQVRVRH 271 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNA 312 ++ KL+ A Sbjct: 272 FLVMLPADAPKEAVDAATAKLKDLA 296 >gi|330958458|gb|EGH58718.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 93 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 24/80 (30%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 + + + + + +S G + +F ++ + N Sbjct: 14 EDKCNELKTQIEGGADFAEIAKANSSCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPVNVV 73 Query: 259 -NPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|238765154|ref|ZP_04626087.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia kristensenii ATCC 33638] gi|238696644|gb|EEP89428.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia kristensenii ATCC 33638] Length = 99 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 1/76 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +K+ D +KF++ + G + D+ P F + + Sbjct: 21 EKQANDILAQLNNGANFQELAKKFSNCPSKRNGGDLGEFNKGDMVPAFDKAVFSCELLQP 80 Query: 258 TNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 81 YGPVKTQFGYHIIKVL 96 >gi|296313595|ref|ZP_06863536.1| hypothetical protein NEIPOLOT_00406 [Neisseria polysaccharea ATCC 43768] gi|296839829|gb|EFH23767.1| hypothetical protein NEIPOLOT_00406 [Neisseria polysaccharea ATCC 43768] Length = 288 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 79/305 (25%), Gaps = 25/305 (8%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK----INGE 71 + + + S + T+NG+ I I ++A + + + + Sbjct: 1 MKAKILTSAALLACSGSLFAQT-----LATVNGQKIDSSVIDAQVAAFRAENSRAEDSPQ 55 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L + + + I T+ QE+++ + + + A + Sbjct: 56 LRRALLNQEITNTVVAQEVKRLKLDRSAEFKDMLAKLRAEAEKSGDDK---------KPS 106 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + E + A + ++ + Sbjct: 107 FKTVWQAVEYGLNGRAYALHIAKTQPVSEQDAKAAYDNISGFYKGTQEVQLGEILTDKEE 166 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + + K ++ L+ + ++ V + E + P +Q + Sbjct: 167 NAKKAVAGLKAKKGFDAVLKQYSLNDHTKQTGKPDGYVPLKDL----EQGVPPLYQAIKD 222 Query: 252 KSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + T P + D+RD+ + Q T + V L Sbjct: 223 LKKGEFTATPLKNGDFYGVYYVNDRRDVKV--PSFDEMKEQLTGDLQAERIDRAVGALLD 280 Query: 311 NAIIH 315 A I Sbjct: 281 KADIK 285 >gi|317046370|ref|YP_004114018.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pantoea sp. At-9b] gi|316947987|gb|ADU67462.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pantoea sp. At-9b] Length = 93 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 9/76 (11%), Positives = 21/76 (27%), Gaps = 1/76 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 + + K + +K ++ + G + + P F + + Sbjct: 15 EAKAKALLAQLEKGANFQQLAKKHSTCPSGRNGGDLGEFRKGQMVPAFDKAVFSCPLLQP 74 Query: 258 TNPYVTQKGVEYIAIC 273 P T G I + Sbjct: 75 YGPVKTAFGYHIIKVL 90 >gi|160902059|ref|YP_001567640.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Petrotoga mobilis SJ95] gi|160359703|gb|ABX31317.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Petrotoga mobilis SJ95] Length = 667 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 28/246 (11%), Positives = 72/246 (29%), Gaps = 8/246 (3%) Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT--GLSAEDFSSFLDKQGI 129 L+ V L E + + E+S + + VN ++ + Q Sbjct: 103 LDNQVVDLLFDEKIVRYYAEQSDLLPSNEEVNNQINTQVDQYITQYKFDETNWNNMLQYY 162 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 G + + I + V + + + E + Sbjct: 163 GSEQNIRNILISGLQQTVETDLINNAVKDAVASVSREDALAYIEQNFESIKNDYEEVRVQ 222 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQN 248 + L + IK+ + + ++ + + G+ ++ + F++ Sbjct: 223 HILLSDEATANSIKEMIATGE--ITFEDAASLYSLDTSNATNSGEIGWIKHGNYEQSFED 280 Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYV 305 + P T +G I + DK+ + +I L + A+ T + ++ Sbjct: 281 AVFNGQVGEIIGPVQTSEGFHLIRVLDKKIFEKPEDIFLYVDVYAEVESTVQGQKYDNWL 340 Query: 306 KKLRSN 311 + + Sbjct: 341 SNYKES 346 >gi|152972767|ref|YP_001337913.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206579081|ref|YP_002241160.1| peptidyl-prolyl cis-trans isomerase C [Klebsiella pneumoniae 342] gi|238892378|ref|YP_002917112.1| peptidyl-prolyl cis-trans isomerase C [Klebsiella pneumoniae NTUH-K2044] gi|262040912|ref|ZP_06014138.1| peptidyl-prolyl cis-trans isomerase C [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288937798|ref|YP_003441857.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Klebsiella variicola At-22] gi|330012128|ref|ZP_08307290.1| peptidyl-prolyl cis-trans isomerase [Klebsiella sp. MS 92-3] gi|150957616|gb|ABR79646.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206568139|gb|ACI09915.1| peptidyl-prolyl cis-trans isomerase C [Klebsiella pneumoniae 342] gi|238544694|dbj|BAH61045.1| peptidyl-prolyl cis-trans isomerase C [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041801|gb|EEW42846.1| peptidyl-prolyl cis-trans isomerase C [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288892507|gb|ADC60825.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Klebsiella variicola At-22] gi|328533943|gb|EGF60602.1| peptidyl-prolyl cis-trans isomerase [Klebsiella sp. MS 92-3] Length = 93 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 24/81 (29%), Gaps = 1/81 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + + Sbjct: 13 KEEKLALDLLEQLKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPEL 72 Query: 256 NTTNPYVTQKGVEYIAICDKR 276 T P TQ G I + ++ Sbjct: 73 EPTGPLHTQFGYHIIKVLYRK 93 >gi|167898198|ref|ZP_02485600.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei 7894] gi|167922759|ref|ZP_02509850.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei BCC215] Length = 265 Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 44/174 (25%), Gaps = 5/174 (2%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 ++ + R ++ +++ + Sbjct: 79 LLARELTPLPEPTRDACERYYLNHAARFRRCDIVYASHILFAVTDATPLAPLRREAEATL 138 Query: 207 ESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVT 263 L P+ + ++ G LL D P+F T Sbjct: 139 ARVLAEPQTFEARARELSNCPSAQVGGSLGQLLRGDSVPEFDAAVFDTTDSGVLPRLVNT 198 Query: 264 QKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + G + I + D A+ A ++A K +YV L S A I Sbjct: 199 RFGFHIVRIERRVPGDPVPFDAVAAEIAAFLAERVRHKAIQQYVTILASGARIE 252 >gi|78485939|ref|YP_391864.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomicrospira crunogena XCL-2] gi|78364225|gb|ABB42190.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomicrospira crunogena XCL-2] Length = 102 Score = 63.2 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 22/81 (27%), Gaps = 1/81 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 + ++ + + G + P+F Q + + Sbjct: 22 KTEAECLALKQQINDFETFDQLAREHSLCPSGRVGGDLGIFGPGKMVPEFDQVVFNDAIG 81 Query: 256 NTTNPYVTQKGVEYIAICDKR 276 P TQ G I I D++ Sbjct: 82 EVHGPVPTQFGYHLIWITDRK 102 >gi|154494369|ref|ZP_02033689.1| hypothetical protein PARMER_03724 [Parabacteroides merdae ATCC 43184] gi|154085813|gb|EDN84858.1| hypothetical protein PARMER_03724 [Parabacteroides merdae ATCC 43184] Length = 532 Score = 63.2 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 13/150 (8%), Positives = 44/150 (29%), Gaps = 4/150 (2%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + ++ D+ + R ++ ++++S Sbjct: 224 KIHSRRRNPGLVRVAHVLIPFEKDSVKFGEAETLARAEEVYRKAKDGADFAMLAKEYSSD 283 Query: 226 I-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 G+ ++ F+ + + P T+ G I + +K+ + Sbjct: 284 AGSAKRGGELPAFGVGEMVEPFEVAAFALNTPGELSRPVKTRFGYHIIKLIEKKGIPSFD 343 Query: 283 ALKAYLSAQNTPTKIE-KHEAEYVKKLRSN 311 K S Q + ++ + ++++ Sbjct: 344 DKKKAWSRQMAQGERNFEYYGAFDERMKKE 373 Score = 40.8 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 22/258 (8%), Positives = 58/258 (22%), Gaps = 40/258 (15%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 +L++ + ++ + + T+ G+ I + Sbjct: 10 LLVLSLVFACMTGNAQVSVDSVVMTVAGKQIPLDEF------------------------ 45 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + S + +V+ +N L + + Sbjct: 46 -----IFIAQKNSEVNLSDRKSVNAYVELFKNFKLKVAEAEDLGLDKTKAFKDELDSYRA 100 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q + + + E A + L + ++ V + Sbjct: 101 QLTSSYL---------SDKDGEEAAVRAVYDRYGEVLELSHILFRLPQRTLSKDTVPVYQ 151 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ--YLLESDLHPQFQNLLKKSQNNTT 258 + +A E ++ + + L + + + Sbjct: 152 KAIEAYERIQAGEDFAAVGKELKDADKENVGYEYVHCLLPMQTVKAFENVAYSLPVGSVS 211 Query: 259 NPYVTQKGVEYIAICDKR 276 P T G I I +R Sbjct: 212 LPVRTTMGFHIIKIHSRR 229 >gi|119945608|ref|YP_943288.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychromonas ingrahamii 37] gi|119864212|gb|ABM03689.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychromonas ingrahamii 37] Length = 93 Score = 63.2 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 ++ D ++ + +K +S G + P+F + + Sbjct: 14 EESCLDIKQQIEAGTDFADLAKKHSSCPSGAQGGALGEFGPGMMVPEFDAVVFSADVGSV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|260654850|ref|ZP_05860338.1| putative fibrous sheath CABYR-binding protein [Jonquetella anthropi E3_33 E1] gi|260630565|gb|EEX48759.1| putative fibrous sheath CABYR-binding protein [Jonquetella anthropi E3_33 E1] Length = 570 Score = 63.2 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 35/328 (10%), Positives = 86/328 (26%), Gaps = 23/328 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSY------KSWAMSSRIRTTINGEVITDGDISK 58 + TSL IK + F++ +P++ K+ + + +I+G ++ K Sbjct: 8 ILTSLRTQIKWILVAFLVAFGLSIPLMYGVGRHDEKNKGVRDHVVASIDGREYKLSELHK 67 Query: 59 RIALLKLQKINGELE-------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 + + + + + L + + I++ GI VN Q Sbjct: 68 AMQGFAERNNIKLTQENLPAVYQQTLDSLATQIALDKAIKERGIEPTEAQVNEQLKQLEV 127 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 ++ G K LA ++ + + + + Sbjct: 128 QYVTKEAFLANLRAT-GSSLEQVKANLAHDLAVRQLLTQESESATVDDQQVKSLYDLFVT 186 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 Y V + + + + +K + Sbjct: 187 MKQPMVYRPSGVEGHHAEFRTKEAAEA------FLAAVKAGEDWKTAADKAGDNKIGSTD 240 Query: 232 GKAQ-YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYL 288 GK ++ ++D+ +F L + T + + L Sbjct: 241 GKMTSFVSDTDVKERFPFLGTMKDGDYTLQQIADGDFLVFRRVGATAEKTLTFEEAQPQL 300 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A + E++ L+ + Sbjct: 301 KALALNQARMVKQQEFLTALKDKVKVEI 328 >gi|110597632|ref|ZP_01385917.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium ferrooxidans DSM 13031] gi|110340752|gb|EAT59229.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium ferrooxidans DSM 13031] Length = 702 Score = 63.2 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 11/102 (10%), Positives = 26/102 (25%), Gaps = 2/102 (1%) Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGK 233 +L V++ + + K+++ ++ G Sbjct: 344 QPVARASHILLRFNPASRAEVQKVRELSLLISQQLQAGVPFESLARKYSADPGSALNGGD 403 Query: 234 AQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICD 274 + + P+F P TQ G+ I + Sbjct: 404 IGWFSRERMVPEFAAAVFNARPGAVIGPVQTQFGLHIIKVTG 445 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 2/74 (2%) Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHE 301 P + + ++P T G + + + G ++ Q K E+ Sbjct: 625 PLVEAMSGMVVGKLSSPVKTTDGYALVLLTKRALPEGLDPKAEKVTVTPQLLRAKQEQLF 684 Query: 302 AEYVKKLRSNAIIH 315 AE+ +R NA + Sbjct: 685 AEFFAAVRKNAKVE 698 >gi|304310966|ref|YP_003810564.1| Probably peptidyl-prolyl CIS-trans isomerase C [gamma proteobacterium HdN1] gi|301796699|emb|CBL44911.1| Probably peptidyl-prolyl CIS-trans isomerase C [gamma proteobacterium HdN1] Length = 264 Score = 63.2 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 29/275 (10%), Positives = 77/275 (28%), Gaps = 42/275 (15%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG I + I +A + + + A L++ L Q+ G+ D Sbjct: 15 LVSVNGVEIPEAAIKAEMAAEYADEERVKAWEKAATALVIRELLLQQASLQGLEGDEA-- 72 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 S+ + + + PD+++ Sbjct: 73 -ECIDTLLSRNIEVPTADESYCRRFFEENPARFRS-------PDLIEAR----------- 113 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + P + ++ ++ E R + ++ Sbjct: 114 ------------------HILFAAAPGDWDARDLAQEEAVRIIERLRATPEQFAEYANEY 155 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDK--RDLG 279 ++ G L + P+F++ + P ++ G + I + Sbjct: 156 SACPSREEGGSLGQLSKGSTVPEFESAIFGLPTGLHGTPIESRYGYHVVWIDHRVDGQPL 215 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +K ++ + ++Y++ L +A I Sbjct: 216 PYEHVKEGVARYLEDNVFRQGLSQYLQLLAGSATI 250 >gi|238789352|ref|ZP_04633138.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia frederiksenii ATCC 33641] gi|238794291|ref|ZP_04637904.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia intermedia ATCC 29909] gi|238722495|gb|EEQ14149.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia frederiksenii ATCC 33641] gi|238726375|gb|EEQ17916.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia intermedia ATCC 29909] Length = 98 Score = 63.2 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 1/76 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +K+ D +KF++ + G + D+ P F + + Sbjct: 20 EKQANDILAQLNNGANFQELAKKFSNCPSKRNGGDLGEFNKGDMVPAFDKAVFSCELLQP 79 Query: 258 TNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 80 YGPVKTQFGYHIIKVL 95 >gi|73538831|ref|YP_299198.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha JMP134] gi|72122168|gb|AAZ64354.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha JMP134] Length = 250 Score = 62.8 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 28/275 (10%), Positives = 74/275 (26%), Gaps = 45/275 (16%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 T+NG +TD DI + + + + + S + Sbjct: 3 VTVNGVELTDDDIEREMDQHRDARNPA-----------------------HMATVSAILR 39 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 A G++ D + + A +S + Sbjct: 40 RLMRTEAERLGIAGGDTDDDALALALLAHEAPVPDADESSCRRHYDSR------------ 87 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + +LF + + + ++ + + + + Sbjct: 88 -----PDRFREGEWVEVEHILFQVTPRVPLD-ALREVALQTLALIKGDPSSFASHAQALS 141 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKGVEYIAICDKRDLG-- 279 + G+ + + P+F+ + + T+ G+ + + D+ D Sbjct: 142 NCPSGAGGGRLGRVFRGETAPEFERAVFSAPVQGLLPQLVETRFGLHIVRVLDRCDGTRL 201 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 ++A ++ T ++ +Y L A I Sbjct: 202 PFDMVRADIAHALTAAARDRAWKQYASLLIGRASI 236 >gi|54297774|ref|YP_124143.1| hypothetical protein lpp1825 [Legionella pneumophila str. Paris] gi|53751559|emb|CAH12977.1| hypothetical protein lpp1825 [Legionella pneumophila str. Paris] Length = 624 Score = 62.8 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 22/233 (9%), Positives = 67/233 (28%), Gaps = 8/233 (3%) Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 EI++ + + + A+ + + ++ Sbjct: 167 FALSDEIKRFVRLYMQTRDYDYLTVPSDRFEQQAKISEDDIKSYYNQHHKKFMTSEQVTL 226 Query: 144 WPDVVK-NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 ++ +D + +I + ++ K+ + R + + Sbjct: 227 DYVLLSMHDIKSQIKISPDQIKSYYEENKSNYLTPAQWRVAHILFAVPENATKEEQDSIK 286 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDV-----SIGKAQYLLESDLHPQFQNLLKKSQNNT 257 + A+E L K + +K+ + D + G ++ Sbjct: 287 QKADEVYSDLKKHPEQFDKYVASKSDDKLSITNKGILPWITGGQNEYGRALSNLTRPGQI 346 Query: 258 TNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKL 308 + P T+ G E + + + + ++ + Q T + A+ +++L Sbjct: 347 SIPVQTKYGYEIFKLIAYKPVTTKSLQEVENIMKDQLTSDMAQAKYAQVLEQL 399 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 33/319 (10%), Positives = 74/319 (23%), Gaps = 24/319 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + + L + I F + + Y S + +N + IT Sbjct: 1 MLQKLNEHIQGVVAWLVIILIAITFTLFGVDYYFQSRQISDAKVIVNDKPITMQAFETNY 60 Query: 61 ALLKLQK--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + Q+ L+ + ++I + Q K G N VQ + Sbjct: 61 RRTRAQQDLPQMTAADEKNLQNQVLNQMITNEVSIQAARKYGFEVSPEQANAAIVQIPQF 120 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + + F + + + Sbjct: 121 QEDGHFSAQRYQQALSGALFTPETFQNEVRQGMLLNQQRFAFMGTSFALSDEIKRFVRLY 180 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + R+Y L D Q + IK + ++ + I Sbjct: 181 MQTRDYDY---LTVPSDRFEQQAKISEDDIKSYYNQHHKKFMTSEQVTLDYVLLSMHDIK 237 Query: 233 KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292 + + ++ T I + + + Sbjct: 238 SQIKISPDQIKSYYEENKSNYL--------TPAQWRVAHILFAVPENATKEEQDSIKQKA 289 Query: 293 TP-----TKIEKHEAEYVK 306 K + +YV Sbjct: 290 DEVYSDLKKHPEQFDKYVA 308 >gi|302804512|ref|XP_002984008.1| hypothetical protein SELMODRAFT_423141 [Selaginella moellendorffii] gi|300148360|gb|EFJ15020.1| hypothetical protein SELMODRAFT_423141 [Selaginella moellendorffii] Length = 148 Score = 62.8 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 12/103 (11%), Positives = 31/103 (30%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R VL +Q + + + +F+ G Sbjct: 47 TYVKARHVLCEKQGRINDAYKKLQDGWLNNGDKVP-PAEFAKVAAEFSECPSGKKGGDLG 105 Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277 + + FQ + + +T+ P+ + G +I + +++ Sbjct: 106 WFPRGKMAGPFQEVAFSTPVGSTSAPFKSTHGYHFILVEGRKN 148 >gi|149909113|ref|ZP_01897771.1| peptidyl-prolyl cis-trans isomerase C [Moritella sp. PE36] gi|149807864|gb|EDM67809.1| peptidyl-prolyl cis-trans isomerase C [Moritella sp. PE36] Length = 92 Score = 62.8 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 25/78 (32%), Gaps = 1/78 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 + + + + + +K ++ G + P+F ++ + N Sbjct: 14 EAKCNELKAQIEAGADFADVAKKNSNCPSAAKGGDLGKFGPGMMVPEFDKVVFSAPLNTV 73 Query: 258 TNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 74 QGPVKTQFGYHLLDVTSR 91 >gi|189499340|ref|YP_001958810.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium phaeobacteroides BS1] gi|189494781|gb|ACE03329.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium phaeobacteroides BS1] Length = 701 Score = 62.8 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 11/96 (11%), Positives = 31/96 (32%), Gaps = 2/96 (2%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES 240 +L + + + + + K + +++ + G + + Sbjct: 349 HILIPFSKGDVSGEKEARGLAEKIMQEIRSGKKFADLAMQYSQDPGSAANGGDLGWFSRT 408 Query: 241 DLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK 275 + P+F + + + P TQ G+ I + K Sbjct: 409 AMVPEFAQVVFRAATGTLAGPVETQYGLHIIKVTGK 444 Score = 39.7 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 2/73 (2%) Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEA 302 + ++ + P + G I + K D + KA L K E+ Sbjct: 624 LIEAIIGMEPGTVSKPVAVKGGRALIVLRGKAYPDTADLESEKARLLPMLEKVKQERFIQ 683 Query: 303 EYVKKLRSNAIIH 315 +Y R A I Sbjct: 684 DYFTAERRAATIE 696 >gi|255645973|gb|ACU23475.1| unknown [Glycine max] Length = 146 Score = 62.8 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 9/103 (8%), Positives = 31/103 (30%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R +L + + + ++ + ++++ G Sbjct: 45 TYVKARHILCEKQGKINEAYKKL-QDGWLCNGDKVPPAEFAKIAQEYSECPSGKKGGDLG 103 Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277 + + FQ++ + T+ P+ + G I +++ Sbjct: 104 WFPRGKMAGPFQDVAFNTPVGATSAPFKSTHGYHIILSEGRKN 146 >gi|239908536|ref|YP_002955278.1| peptidyl-prolyl cis-trans isomerase [Desulfovibrio magneticus RS-1] gi|239798403|dbj|BAH77392.1| peptidyl-prolyl cis-trans isomerase [Desulfovibrio magneticus RS-1] Length = 650 Score = 62.8 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 57/166 (34%), Gaps = 7/166 (4%) Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ-GFVQKRIKDAEESRLR 211 + + ++E + K + +R +L +P + Q +KR+K + + Sbjct: 242 PAEITDTDIEADFKANQKKYERPEQVRVRHILMMLPPDAPQEVVDAAEKRLKAMADDVRK 301 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK----SQNNTTNPYVTQKGV 267 + K + + +L + L +F +K ++ ++P T G+ Sbjct: 302 GKDFATLIPKDPANADGIIGEDWAWLPKGSLPKEFAPFEEKAFTLKKDEVSDPVRTSLGL 361 Query: 268 EYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 I +K+ G +K + A + + + ++ Sbjct: 362 HLIQGGEKQASGQRALAEVKDEIRADLAEQRAADKLTKSLDAIQEK 407 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 30/326 (9%), Positives = 79/326 (24%), Gaps = 42/326 (12%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + ++I+F + ++ + T+NG+ I D K+ Sbjct: 1 MLDPMRKYAQSWGIKIVFGLIIIVFVFWGVGNFNGDRA--TVLATVNGQPILIKDYEKQY 58 Query: 61 ALLKLQKINGE------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 N ++ L + + + GI + + + Sbjct: 59 QENLRLVKNKNPNVTDKDLQDGGFRWQVFTNMVTTKLLEDQAKTLGIAVTAGELRSEIAK 118 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 S + + + ++ ++ G A + Sbjct: 119 IPAFQNESKQFDAKRYENLLKANDVSPGEFEADF-RQQLLLEKLAAFVGLPAQVAEAEAR 177 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + + +I+ + F+ D ++ K E + F Sbjct: 178 SIFDFMREQAIIKYIPFAATDFTKGVTISDEQIAKYYEARKDEFATPAQVKIDFV----- 232 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP-YVTQKGVEYIAICDKRDLGGEIALKAY 287 +F T+ K+ E + Sbjct: 233 ----------------EFTPKAMAKPAEITDTDIEADF-----KANQKKYERPEQVRVRH 271 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAI 313 + P ++ K+L++ A Sbjct: 272 ILMMLPPDAPQEVVDAAEKRLKAMAD 297 >gi|32266195|ref|NP_860227.1| hypothetical protein HH0696 [Helicobacter hepaticus ATCC 51449] gi|32262245|gb|AAP77293.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 264 Score = 62.8 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 91/285 (31%), Gaps = 33/285 (11%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 + + + +NG IT +I+ LQ ++ A+ LI E LK EIE+ Sbjct: 4 AYGEVIAGVAIRVNGHAITLYEIA------SLQSHLKISKQAAIDMLINERLKDDEIERF 57 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 I+ + ++ A N LS ++F + ++ + Q ++++ Sbjct: 58 KISIEDFKIDEEIALLAANANLSKDEFLR-KATHTMSLQEYRTQIKKQLQTKELMQRILA 116 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 E ++ + + + K + ++ Sbjct: 117 SNISISS-EDELLTYYTRHKKEFLIPSQVRVVRYFSQTDNALQKAIQSPKQNIKGVQKVN 175 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT--QKGVEYIA 271 + + S L+PQ + + NN P +T G Sbjct: 176 ET---------------------IALSSLNPQIAQVFIHTPNNEFTPVLTTGGNGFVSFL 214 Query: 272 ICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + ++ K ++ + K + AE+ K+RS+A I Sbjct: 215 VKERLGETPINFEEAKPLINQKIMAQKEQSIIAEHFNKIRSSANI 259 >gi|251787801|ref|YP_003002522.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dickeya zeae Ech1591] gi|271502416|ref|YP_003335442.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dickeya dadantii Ech586] gi|247536422|gb|ACT05043.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dickeya zeae Ech1591] gi|270345971|gb|ACZ78736.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dickeya dadantii Ech586] Length = 93 Score = 62.8 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +++ D + +K ++ + G + D+ P F + + Sbjct: 13 DTEQQATDILAQLEKGADFQQLAKKHSTCPSKRNGGDLGEFRKGDMVPDFDKAVFSCELL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 73 KPFGPVKTQFGYHIIKVL 90 >gi|195620008|gb|ACG31834.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Zea mays] Length = 151 Score = 62.8 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 9/103 (8%), Positives = 29/103 (28%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R VL + +Q + + + ++++ G Sbjct: 50 TYVKARHVLCEKQGKINEAYKKLQDGWLNNGDKVP-PAEFAKVAQEYSECPSGKKGGDLG 108 Query: 236 YLLESDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + P + + + P+ + G +I +++ Sbjct: 109 WFPRGKMAGPFQEVAFNTPEGTVSAPFKSTHGYHFILCEGRKN 151 >gi|163793237|ref|ZP_02187213.1| Parvulin-like peptidyl-prolyl isomerase [alpha proteobacterium BAL199] gi|159181883|gb|EDP66395.1| Parvulin-like peptidyl-prolyl isomerase [alpha proteobacterium BAL199] Length = 626 Score = 62.8 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 32/387 (8%), Positives = 86/387 (22%), Gaps = 77/387 (19%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEV-ITDGDISKR 59 M + + ++ + +++ F I I + ++ ++ E T +++ Sbjct: 1 MLQFIRSKVTSIFVKILFVMLIVSFAIWGIGDVFFGNPAGKVAISVGDETRFTTQEVAGE 60 Query: 60 IALLK---------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 + Q I + + ++ E L ++ ++ V F Sbjct: 61 FETARRRIGVPLTVEQAIQLGMLDQVMNNMVTEGLMIAATRSLDLSVGTDRVAEFVRSRF 120 Query: 111 RNTGLSAEDFSSFL--DKQGIGDNHFKQYLAIQSIWPDVV-------------------- 148 + + G + F L ++ Sbjct: 121 TDQTGQFDRARYQTTLANNGWSEEEFILRLRQDFARRQLIDALTAADAAPEAAVDRVFAY 180 Query: 149 --KNDFMLKYGNL---------EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 + + N + + E + + Sbjct: 181 RQERRIAEVVTIPAAAVPEPTAPDDAALNSYFEASKSGYEEPEYRSIAWAQVSPAAVAKT 240 Query: 198 V------------QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG------------- 232 + ++ + A+ R + + + E + H G Sbjct: 241 LDIPEGDVRAAYDERADQLAKPERREVQQILFETEDASKAAHARIAGGEDFVAVAKDTTG 300 Query: 233 ------KAQYLLESDLHP-QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIA 283 L L + +QN + P + G + + Sbjct: 301 ADEAALDLGALARDGLPTGTADAVFALAQNAVSEPVKSGFGWHLFRVRSIQPGTTVTYEE 360 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRS 310 K + + + E KL Sbjct: 361 AKGRIRDELAHDRALDVVYETANKLED 387 >gi|256841003|ref|ZP_05546510.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|298375772|ref|ZP_06985728.1| ppic-type ppiase domain-containing protein [Bacteroides sp. 3_1_19] gi|256736846|gb|EEU50173.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|298266809|gb|EFI08466.1| ppic-type ppiase domain-containing protein [Bacteroides sp. 3_1_19] Length = 533 Score = 62.8 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 13/150 (8%), Positives = 44/150 (29%), Gaps = 4/150 (2%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-S 224 K R ++ ++ D+ +Q+ + + + ++++ Sbjct: 229 KVHSRKPNPGRIHVAHILIAFPKDSAIQDSSAFLAKAQAIYKQVQEGADFGELAKEYSGD 288 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 G + ++ F+ + + T+ G I + DK+ Sbjct: 289 AASAKKEGVLPWFGVGEMVQPFEQAAFALSKPGDLSEVVETRFGYHIIKLIDKKGRPSFE 348 Query: 283 ALKAYLSAQNTPTKIE-KHEAEYVKKLRSN 311 + LS + + + + +++ Sbjct: 349 EEEKALSRRMGQGERNFELYKAFDDRMKKE 378 Score = 42.7 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 29/274 (10%), Positives = 63/274 (22%), Gaps = 40/274 (14%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + +K +LI + V+ + S + T+ G+ + + Sbjct: 3 IRAMVKEFLMKKLLISLGVFACVTVNAQTASDSVVMTVAGKQVPLSEF------------ 50 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + + + +V+ +N L + S Q Sbjct: 51 -----------------IFIAEKNGEVDLSNTKSVKNYVELFKNFKLKVAEAESLGIDQT 93 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 Q I + + E E A + L + Sbjct: 94 SSFKSELDGYRAQLIDSYM---------SDKEGEKAAARAVYDRGDHSVELTHILFRLPE 144 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY--LLESDLHPQF 246 ++ V + E + + A K + + L L Sbjct: 145 KTVSKDTVAVYQEAMRVYERLQKGEDMETVGKALAEKDKEHVACEYVRCLLPMQSLKVFE 204 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + P T+ G I + ++ G Sbjct: 205 DAAYSLPIGVVSEPVRTKLGFHLIKVHSRKPNPG 238 >gi|261401822|ref|ZP_05987947.1| conserved hypothetical protein [Neisseria lactamica ATCC 23970] gi|269208029|gb|EEZ74484.1| conserved hypothetical protein [Neisseria lactamica ATCC 23970] Length = 288 Score = 62.8 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 80/305 (26%), Gaps = 25/305 (8%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK----INGE 71 + + + + S + T+NG+ I I ++A + + + + Sbjct: 1 MKAKILTSVALLACSGSLFAQT-----LATVNGQKIDSSVIDAQVAAFRAENSSAEDSPQ 55 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L + + + I T+ QE+++ + + + A + Sbjct: 56 LRRALLNQEITHTVVAQEVKRLKLDRSAEFKDMLAKLRAEAEKSGDDK---------KPS 106 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + E + A ++ ++ Sbjct: 107 FKTVWQAVEYGLNGRAYALHIAKTQPVSEQDAKAAYDNIRGFYKGTQEVQLGEILTDKED 166 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + + K ++ L+ + ++ V + E + P +Q + Sbjct: 167 NAKKAVAGLKAKKGFDAVLKQYSLNDHTKQTGKPDGYVPLKDL----EQGVPPLYQAIKD 222 Query: 252 KSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + T P + D+R++ + Q T + V L Sbjct: 223 LKKGEFTATPLKNGDFYGVYYVNDRREVKV--PSFDEMKEQLTGDLQAERIDRAVGALLG 280 Query: 311 NAIIH 315 A I Sbjct: 281 KADIK 285 >gi|293602043|ref|ZP_06684498.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC 43553] gi|292819573|gb|EFF78599.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC 43553] Length = 93 Score = 62.8 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 8/81 (9%), Positives = 25/81 (30%), Gaps = 1/81 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256 + + + + + ++ +S G + +F ++ + Sbjct: 13 TEAKCNELKTAIENGADFAQVAKENSSCPSSRDGGNLGTFGPGQMVKEFDTVVFSAPVGV 72 Query: 257 TTNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 73 VQGPVKTQFGYHLVEVTSRQD 93 >gi|207738621|ref|YP_002257014.1| ppic-type peptidyl-prolyl cis-trans isomerase protein [Ralstonia solanacearum IPO1609] gi|206591989|emb|CAQ58895.1| ppic-type peptidyl-prolyl cis-trans isomerase protein [Ralstonia solanacearum IPO1609] Length = 268 Score = 62.8 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 32/286 (11%), Positives = 75/286 (26%), Gaps = 54/286 (18%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 + +NG +T + + IA Q ++ + Q+LI L +Q+ K+ Sbjct: 22 VIALVNGTQVTQAQLDRAIAQSGAQANP-QIAQALKQQLIARELFRQQAAKNPAYEKLPA 80 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 V Q I +K++ E Sbjct: 81 VKQAM-----------------------------QEAHDAVITQAWLKDNIKPAPITDEQ 111 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + ++ +EY R + Q +++ ++ Sbjct: 112 VKARYDAIVASLGDKEYKARVIQLGDDVTAAQVLELLKQ-----------GGDFAKLAQQ 160 Query: 222 FASKIHDVSIGKAQYLLESD-----------LHPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 +++ + V G ++ L + +T P + Sbjct: 161 YSTAPNKVRGGDMDWVSFKVPAEEGKTQNLPLPLAREIAALGIGATSTAPVEVGSQRYIV 220 Query: 271 AICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + R + +K + ++E+ + V L A + Sbjct: 221 KVEAARPTQVPAYDTVKPAIRQALESAELERVTVQVVGGLLKQAKV 266 >gi|194292769|ref|YP_002008676.1| peptidyl-prolyl cis-trans isomerase [Cupriavidus taiwanensis LMG 19424] gi|193226673|emb|CAQ72624.1| Peptidyl-prolyl cis-trans isomerase [Cupriavidus taiwanensis LMG 19424] Length = 250 Score = 62.8 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 13/173 (7%), Positives = 46/173 (26%), Gaps = 5/173 (2%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 + + + + + +LF + + + + Sbjct: 66 LAREAATPEADEASCRRHYDSHPGRFREGEWVEADHILFQVTPRVPLD-ALREVAAQTLA 124 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQ 264 R + ++ + G+ + + P+F+ L + ++ Sbjct: 125 LVRGDPASFAHHARALSNCPSGANGGRLGRVFRGETAPEFERALFAAQQDGVLPQLLESR 184 Query: 265 KGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 G+ + I ++ ++ ++ ++ +Y L A I Sbjct: 185 YGLHIVRILERCPGTRLPFETVRGEIARALGAAARDRAWKQYASLLIGRARIE 237 >gi|64213910|gb|AAY41234.1| putative peptidyl-prolyl cis-trans isomerase [Gossypium hirsutum] Length = 143 Score = 62.8 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 9/103 (8%), Positives = 31/103 (30%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R +L + + + + ++ + ++++ G Sbjct: 42 TYVKARHILCEKQGKINEAYKKL-QDGWLSNGDKVPPAEFAKVAQEYSECPSGKKGGDLG 100 Query: 236 YLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRD 277 + + FQ + + T+ P+ + G I +++ Sbjct: 101 WFPRGKMAGPFQEVAFNTVIGATSAPFKSTHGYHIILCEGRKN 143 >gi|290513194|ref|ZP_06552556.1| peptidyl-prolyl cis-trans isomerase C [Klebsiella sp. 1_1_55] gi|289774405|gb|EFD82411.1| peptidyl-prolyl cis-trans isomerase C [Klebsiella sp. 1_1_55] Length = 93 Score = 62.8 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 24/81 (29%), Gaps = 1/81 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + + Sbjct: 13 KEEKLALDLLEQLKGGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPEL 72 Query: 256 NTTNPYVTQKGVEYIAICDKR 276 T P TQ G I + ++ Sbjct: 73 EPTGPLHTQFGYHIIKVLYRK 93 >gi|307297956|ref|ZP_07577760.1| conserved hypothetical protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306916042|gb|EFN46425.1| conserved hypothetical protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 339 Score = 62.8 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 102/336 (30%), Gaps = 35/336 (10%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG-----------DISKRI- 60 +K +L++ V + S + I +NGE+IT +ISKRI Sbjct: 1 MKKFIAALILLLITAVAL-SQTETLSETGIAAEVNGEIITMDTFLSKVLPNYTEISKRIE 59 Query: 61 -----------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 QK+ E E+ +++ LI ETL Q ++ GI D + + Sbjct: 60 EVDPLFSEMLLNTEAGQKLLEEYERNSLEALIEETLLIQYAKEVGIEADIEALREVVSKS 119 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 +T + S D + + + ++ VV++ + + E Sbjct: 120 IMDTLTELQIEKSDADLFYVLKGYIDGLSSYEA---KVVRDLAYKEVLSSLYEAVTVNAT 176 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + + +Y + + + + + S + +V Sbjct: 177 VTEEEIEQYYLANSSRYAVEEERADMKVLLFDSFSEAYSVWKAASRDANPSSVLDTFPEV 236 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGE--IALK 285 G L+P+ L K ++ I + G + ++ Sbjct: 237 QSGSYTREEIEALNPELVKSLFKPTEGELLSSVVTLDNKYAVIYLESYSPAGAKGIEDVR 296 Query: 286 AYLSAQNTPTKIEKHEAEYVKK----LRSNAIIHYY 317 + K + + ++ + A+I Y Sbjct: 297 EEIQGILISEKKDLFWRIWQEQEFKPFKEEAVIKRY 332 >gi|329767659|ref|ZP_08259179.1| hypothetical protein HMPREF0428_00876 [Gemella haemolysans M341] gi|328839086|gb|EGF88672.1| hypothetical protein HMPREF0428_00876 [Gemella haemolysans M341] Length = 312 Score = 62.8 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 97/310 (31%), Gaps = 26/310 (8%) Query: 13 IKLLTTYFV-LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K + + + V ++ S + I + +T+ DI + I + Sbjct: 1 MKKFKKAILPIALSISVIGLAGCSTGGTKYISSKAGD--VTEKDIVESI-------GASQ 51 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L K A +I + L +K D T++ + G + +Q + Sbjct: 52 LSKTATSMMIQKVLL----DKYKNKIDQKTIDEQLQKAQEQYGGKDKF------EQLLKQ 101 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 F + + + Y + + I + S + Sbjct: 102 QGFTLDKYKDGLKVKAAQTLLINDYAGTNDDKLKESYEKNKHQYHLAHILVSVKSESNPN 161 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLE--SDLHPQFQN 248 + +K+ ++ + ++ + + + G + + + +F++ Sbjct: 162 GLSDEEAKKKAEEVLKKLKDGGDFATLAKENSNDTANASNGGDLGWSSKEDNSFVKEFKD 221 Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYV 305 S++ T++ T G I + D++D + A +A+ K ++ + Sbjct: 222 AAYALSKDKTSDVVKTSFGYHIIKVLDEKDSSFDELKPALAEKAAEEAVKKDSTIVSKAL 281 Query: 306 KKLRSNAIIH 315 KKL + Sbjct: 282 KKLFEEYNVK 291 >gi|332665904|ref|YP_004448692.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliscomenobacter hydrossis DSM 1100] gi|332334718|gb|AEE51819.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliscomenobacter hydrossis DSM 1100] Length = 656 Score = 62.8 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 28/273 (10%), Positives = 71/273 (26%), Gaps = 41/273 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L+I C ++ + + T++G + + K N + + Sbjct: 1 MAKNLLLLIGCFFSLMVFSQAQDKDPVLFTVDGTPVHVSEFK--YIYSKTNGKNADFSRA 58 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 +QE + K + K +TV Sbjct: 59 TLQEYLDLYTKFKLKVKKAKDMKLDTVQ--------------------------VLQEEL 92 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 Q ++ K E + + + K + Sbjct: 93 AGYRRQLADSYLLNKQVTEKLTKELFERSQYDLDIS---------HILFALPAEAKGADT 143 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLL---ESDLHPQFQNLLK 251 ++ + L+ ++ ++ + G ++ + +P + Sbjct: 144 VSTFRQAMEVRARLLKGEDFATIAKQVSADKSAATNGGNIGFVTAMFPNGFYPLESVAYR 203 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 S + + P T G + + KR GE+ + Sbjct: 204 SSFDQVSMPVRTSVGYHLVKVHSKRPARGEVEV 236 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 12/131 (9%), Positives = 34/131 (25%), Gaps = 3/131 (2%) Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 + + + L + + G ++ + Sbjct: 238 HILLRTEDADAMAVKMQIDTLYAALKKGLNFEELAAKNSQDTRTADKGGYVGFVTINRFE 297 Query: 244 PQFQNLLKK--SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKH 300 F++ + + P+ T G I K+++ ++ L A+ + E Sbjct: 298 QAFEDAAFSVAKDGDYSKPFQTSVGWHIIKRISKKEIQPYDQMRGQLEARIKRDARFEMA 357 Query: 301 EAEYVKKLRSN 311 V ++ Sbjct: 358 RKAMVDDIKRE 368 >gi|310779548|ref|YP_003967881.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ilyobacter polytropus DSM 2926] gi|309748871|gb|ADO83533.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ilyobacter polytropus DSM 2926] Length = 575 Score = 62.8 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 41/162 (25%), Gaps = 8/162 (4%) Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 ++ D Y E E+ +K K + + Sbjct: 307 LEKDIKDSYKVSEDELKNFFEKNKLAYDTAASSDANIVEFKAEVSEKDKETALEKAKEIL 366 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQK 265 K++ G + + + F++ + K ++ P TQ Sbjct: 367 KEATPENFEELAIKYSEGPSGPKGGDLGWFEKGQMVKPFEDAVFKGESGKVYPEIVETQF 426 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 G I + +K KA KI + +K Sbjct: 427 GHHIIYVEEK------EESKAKARHILITNKISDETKKLLKD 462 >gi|94986748|ref|YP_594681.1| parvulin-like peptidyl-prolyl isomerase [Lawsonia intracellularis PHE/MN1-00] gi|94730997|emb|CAJ54360.1| Parvulin-like peptidyl-prolyl isomerase [Lawsonia intracellularis PHE/MN1-00] Length = 305 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 99/321 (30%), Gaps = 39/321 (12%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK------ 58 +F L FI + T Y+ + F + + ++ S + +NGE IT + Sbjct: 1 MFNWLYIFI-IFTLYYCVFPFSLYAVENFP-----SGVMAIVNGEPITLQQVEALHDVSG 54 Query: 59 RIALLKLQKINGELEKIAVQELIV-ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 I L+ + L++ L E + + ++ Sbjct: 55 NILPLREKPEVHFLQEQYGDSLYTLIIYTLMSQELGKLGLKVTEQDVLLAENEIKQDYVG 114 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 EDF L ++ + ++Q + + + + K+ EI K + Sbjct: 115 EDFEKSLQEEYLDIETWRQLMKQRLTFQRFQHHILRPKFTLSSDEIEEYYFKHYSEFFIP 174 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 + + +++N + + KD +D+ G + Sbjct: 175 EKVEII----WYQEVENSQQRKAKHKDC-------------------DRNDIEQGDIIRV 211 Query: 238 LESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTP 294 L + + +K T + + +Y + + I + + Sbjct: 212 ALDRLPAKMRQDLMKIKPGEYTPRHKEGEIYQYAFLRKRYPAHQADIIEAYSRIELILLE 271 Query: 295 TKIEKHEAEYVKKLRSNAIIH 315 K+E+ ++++++ A I Sbjct: 272 QKMEQAYEDWLEQVIPQAKIK 292 >gi|304398127|ref|ZP_07380002.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pantoea sp. aB] gi|304354413|gb|EFM18785.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pantoea sp. aB] Length = 93 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 20/78 (25%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 + K+ + +K ++ G + + P F + + Sbjct: 13 KEEALAKEILAKLAKGGNFQELAKKHSTCPSGRKGGDLGEFRQGQMVPAFDKAVFTCPLL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 P T G I + Sbjct: 73 TPYGPVKTGFGYHIIKVL 90 >gi|167624635|ref|YP_001674929.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella halifaxensis HAW-EB4] gi|167354657|gb|ABZ77270.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella halifaxensis HAW-EB4] Length = 92 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 25/80 (31%), Gaps = 1/80 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 + + +D ++ L + + +S G + +F + + N Sbjct: 12 DTEAQCQDLKQQILDGADFGDVAKANSSCPSSAQGGDLGSFGPGMMVKEFDEVVFSAPLN 71 Query: 256 NTTNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 72 EVQGPVKTQFGYHLLEVTSR 91 >gi|152993831|ref|YP_001359552.1| peptidyl-prolyl cis-trans isomerase C [Sulfurovum sp. NBC37-1] gi|151425692|dbj|BAF73195.1| peptidyl-prolyl cis-trans isomerase C [Sulfurovum sp. NBC37-1] Length = 93 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 9/71 (12%), Positives = 24/71 (33%), Gaps = 1/71 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQ 264 E+ +++++ G+ + + P+F + + P TQ Sbjct: 22 EKINSGETTFEAAAKEYSTCPSGARGGELGTFSQGQMVPEFDKVVFNDEVGIVHGPVKTQ 81 Query: 265 KGVEYIAICDK 275 G + I ++ Sbjct: 82 FGYHLLEITER 92 >gi|854592|emb|CAA60941.1| ESS1 [Saccharomyces cerevisiae] gi|1015652|emb|CAA89541.1| ESS1 [Saccharomyces cerevisiae] Length = 190 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 15/193 (7%), Positives = 45/193 (23%), Gaps = 12/193 (6%) Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 LI + + + + D + S + F + + Sbjct: 6 LIPTHNRLRHHNDAPMPSDVASRTGLPTPWTVRYSKSKKREYFFNPETKHSQWEEPEGTN 65 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + + L + I + Q+ Sbjct: 66 KDQLHKHLRDHPV--RVRCLHILIKH---------KDSRRPASHRSENITISKQDATDEL 114 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT 258 K + + + ++ + G + ++ P F++ + + Sbjct: 115 KTLITRLDDDSKTNSFEALAKERSDCSSYKRGGDLGWFGRGEMQPSFEDAAFQLKVGEVS 174 Query: 259 NPYVTQKGVEYIA 271 + + GV I Sbjct: 175 DIVESGSGVHVIK 187 >gi|83747578|ref|ZP_00944615.1| Peptidyl-prolyl cis-trans isomerase [Ralstonia solanacearum UW551] gi|83725758|gb|EAP72899.1| Peptidyl-prolyl cis-trans isomerase [Ralstonia solanacearum UW551] Length = 281 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 32/286 (11%), Positives = 75/286 (26%), Gaps = 54/286 (18%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 + +NG +T + + IA Q ++ + Q+LI L +Q+ K+ Sbjct: 35 VIALVNGTQVTQAQLDRAIAQSGAQANP-QIAQALKQQLIARELFRQQAAKNPAYEKLPA 93 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 V Q I +K++ E Sbjct: 94 VKQAM-----------------------------QEAHDAVITQAWLKDNIKPAPITDEQ 124 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + ++ +EY R + Q +++ ++ Sbjct: 125 VKARYDAIVASLGDKEYKARVIQLGDDVTAAQVLELLKQ-----------GGDFAKLAQQ 173 Query: 222 FASKIHDVSIGKAQYLLESD-----------LHPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 +++ + V G ++ L + +T P + Sbjct: 174 YSTAPNKVRGGDMDWVSFKVPAEEGKTQNLPLPLAREIAALGIGATSTAPVEVGSQRYIV 233 Query: 271 AICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + R + +K + ++E+ + V L A + Sbjct: 234 KVEAARPTQVPAYDTVKPAIRQALESAELERVTVQVVGGLLKQAKV 279 >gi|157962465|ref|YP_001502499.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella pealeana ATCC 700345] gi|157847465|gb|ABV87964.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella pealeana ATCC 700345] Length = 92 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 24/80 (30%), Gaps = 1/80 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 + + + ++ L + + +S G + +F + + N Sbjct: 12 DTEAQCLELKQQILDGADFGDVAKANSSCPSSAQGGDLGSFGPGMMVKEFDEVVFSAPLN 71 Query: 256 NTTNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 72 EVQGPVKTQFGYHLLEVTSR 91 >gi|162451238|ref|YP_001613605.1| foldase protein prsA precursor [Sorangium cellulosum 'So ce 56'] gi|161161820|emb|CAN93125.1| Foldase protein prsA precursor (EC 5.2.1.8) [Sorangium cellulosum 'So ce 56'] Length = 605 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 26/245 (10%), Positives = 68/245 (27%), Gaps = 10/245 (4%) Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 R ++ ++ K +++ T + + + AR E Sbjct: 137 RYLDVRNRQTKKFDNKQYEKQIRNITKMSPTDFREYQRKELIAARMRELIRARVRVGENE 196 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQS--IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 F F ++ + ++ + D + N + E+ + K Sbjct: 197 AFEQFSREKSTRTLAYVRFDRRFYSDLIVDTSEKAIQAWADNNKEELDKAWEGRKAQYQP 256 Query: 177 EYLIRTVLFSIPDNKLQNQ------GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 E + VL + Q + RI+ A + + + + Sbjct: 257 ECRVARVLAVEVRPEEAEQGPEAGKAAAKARIEGAVQRLKKGESFADVARSASDDPSAAR 316 Query: 231 IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK-RDLGGEIALKAYL 288 G+ + + L ++ + + ++ T+ G I + +D E + Sbjct: 317 GGELGCVAKGRLSKPVEDKLFEMKAGDVSDLIETEDGFHVIKLEQIAKDAEAEKIGRQET 376 Query: 289 SAQNT 293 + Sbjct: 377 ARDLY 381 >gi|170727411|ref|YP_001761437.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella woodyi ATCC 51908] gi|169812758|gb|ACA87342.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella woodyi ATCC 51908] Length = 92 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 8/78 (10%), Positives = 25/78 (32%), Gaps = 1/78 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +++ + ++ + + + +S G + +F + + N Sbjct: 14 EEKCEALKQEIMGGADFADVAKANSSCPSGAQGGDLGSFGPGMMVKEFDEVVFSAPLNEV 73 Query: 258 TNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 74 QGPVKTQFGYHLLEVTSR 91 >gi|134283497|ref|ZP_01770197.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei 305] gi|167723620|ref|ZP_02406856.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei DM98] gi|134245246|gb|EBA45340.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei 305] Length = 265 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 22/180 (12%), Positives = 46/180 (25%), Gaps = 4/180 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 ++ + + L + R+ + + + + + Sbjct: 73 DDALDALLARELTPLPEPTRDACERYYLNHAARFRRRDIVYASHILFAVTDATPLAPLRR 132 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNT 257 + + + ++ G LL D P+F Sbjct: 133 EAEATLARVLAEPQTFEARARELSNCPSAQVGGSLGQLLRGDSVPEFDAAVFDTTDSGVL 192 Query: 258 TNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T+ G + I + D A+ A ++A K +YV L S A I Sbjct: 193 PRLVNTRFGFHIVRIERRVPGDPVPFDAVAAEIAAFLAERVRHKAIQQYVTILASGARIE 252 >gi|53722183|ref|YP_111168.1| rotamase/peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei K96243] gi|76817394|ref|YP_335277.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia pseudomallei 1710b] gi|126456222|ref|YP_001075575.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Burkholderia pseudomallei 1106a] gi|167742587|ref|ZP_02415361.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei 14] gi|167819750|ref|ZP_02451430.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei 91] gi|167849600|ref|ZP_02475108.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei B7210] gi|167906559|ref|ZP_02493764.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei NCTC 13177] gi|167914915|ref|ZP_02502006.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei 112] gi|217419213|ref|ZP_03450720.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei 576] gi|226200237|ref|ZP_03795782.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei Pakistan 9] gi|242311165|ref|ZP_04810182.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei 1106b] gi|254190243|ref|ZP_04896752.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei Pasteur 52237] gi|254193423|ref|ZP_04899857.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei S13] gi|254263976|ref|ZP_04954841.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei 1710a] gi|254300502|ref|ZP_04967948.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei 406e] gi|52212597|emb|CAH38623.1| putative rotamase/peptidyl-prolyl cis-trans isomerase family protein [Burkholderia pseudomallei K96243] gi|76581867|gb|ABA51341.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia pseudomallei 1710b] gi|126229990|gb|ABN93403.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei 1106a] gi|157810082|gb|EDO87252.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei 406e] gi|157937920|gb|EDO93590.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei Pasteur 52237] gi|169650176|gb|EDS82869.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei S13] gi|217398517|gb|EEC38532.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei 576] gi|225927745|gb|EEH23787.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei Pakistan 9] gi|242134404|gb|EES20807.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei 1106b] gi|254214978|gb|EET04363.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei 1710a] Length = 265 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 22/180 (12%), Positives = 46/180 (25%), Gaps = 4/180 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 ++ + + L + R+ + + + + + Sbjct: 73 DDALDALLARELTPLPEPTRDACERYYLNHAARFRRRDIVYASHILFAVTDATPLAPLRR 132 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNT 257 + + + ++ G LL D P+F Sbjct: 133 EAEATLARVLAEPQTFEARARELSNCPSAQVGGSLGQLLRGDSVPEFDAAVFDTTDSGVL 192 Query: 258 TNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T+ G + I + D A+ A ++A K +YV L S A I Sbjct: 193 PRLVNTRFGFHIVRIERRVPGDPVPFDAVAAEIAAFLAERVRHKAIQQYVTILASGARIE 252 >gi|329297876|ref|ZP_08255212.1| peptidyl-prolyl cis-trans isomerase C [Plautia stali symbiont] Length = 82 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 21/78 (26%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 + + K + +K ++ + G + + P F + + Sbjct: 2 KQEAQAKALLAQLEKGANFQQLAKKHSTCPSGRNGGDLGEFRKGQMVPTFDKAVFTCPLL 61 Query: 256 NTTNPYVTQKGVEYIAIC 273 P T G I + Sbjct: 62 QPYGPVKTAFGYHIIKVL 79 >gi|317010879|gb|ADU84626.1| hypothetical protein HPSA_03125 [Helicobacter pylori SouthAfrica7] Length = 414 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 37/290 (12%), Positives = 85/290 (29%), Gaps = 35/290 (12%) Query: 32 SYKSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 + + ++ +NG IT I + Q+ + + A LI E +K Sbjct: 148 NAAGNTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKN 201 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 QEIE+ I D + ++ A+ G+ + F L +G ++ L ++ Sbjct: 202 QEIERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQEL 260 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 ++N + E + K+ ++ Sbjct: 261 LRNILLTNVDTSS-ETKMREYYNKHKEQFSIPTEVETVRYTSTNQEDLERAMADPNLEIP 319 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 + + +++ Q + ++ + T G Sbjct: 320 GVTKANEKIE--------------------MKTLNPQIAQVFISHAEGSFTPVMNGGGGQ 359 Query: 268 EY---IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I ++ K +++ + +K E+ +KLR + I Sbjct: 360 FITFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 409 >gi|190150329|ref|YP_001968854.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263670|ref|ZP_07545279.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915460|gb|ACE61712.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870983|gb|EFN02718.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 625 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 16/252 (6%), Positives = 53/252 (21%), Gaps = 15/252 (5%) Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH--ARNTGLSAEDFSSFLD 125 G L + +I E E + A+ Sbjct: 156 NEGMLFSQIQEGVIGSEFNVPEQEALLAKLLLQKRQVRLANYSIAKEATNQTASAEELQK 215 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + + + + + D + ++ +K K + R Sbjct: 216 YYDAHKSELIEPEKLTVEYVTLTPTDVANNVQVNDEQVKTYYEKNKADYATKGETRFAHI 275 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHP 244 + + E + ++ + G + Sbjct: 276 QLANETDAKAVA---------EQVKNGADFAELAKTKSTDKLSAAQGGDLGWAKAGTFPK 326 Query: 245 QFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHE 301 F+ + I + +++ + +K ++ + Sbjct: 327 AFEAAAASLQDGQVSAVVNVDGAYHIIKVLERKAETVIPLEQVKDQITKTIRQELLLTEY 386 Query: 302 AEYVKKLRSNAI 313 + +++ + A Sbjct: 387 SNIAREMANRAF 398 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 23/233 (9%), Positives = 61/233 (26%), Gaps = 23/233 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + F L+ V +NG IT + Sbjct: 1 MIENMHERTKGPV--FKIIFALVSLSFVITGIGTGLVGGDTAAVKVNGTEITQQAFNAAR 58 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + L+ E L +Q ++ + + + Sbjct: 59 NRQQSVLNAQMGERFWDLLDTPEYAKQFNQSVLNGLVDEELLRQYAKELKLGISAEQIKS 118 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 ++ S + + L G+ + + + ++ + + ++ Sbjct: 119 EIVNSPVFQQDGKFSNDLYQQTLRSNGLSADGYAAIVNEGMLFSQIQEGVIGSEFNVP-- 176 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 E A K+ + L + N+ + +QK + + K Sbjct: 177 EQEALLAKLLLQKRQVRLANYSIAKEATNQTASAEELQKYYDAHKSELIEPEK 229 >gi|237508659|ref|ZP_04521374.1| ppic-type ppiase domain protein [Burkholderia pseudomallei MSHR346] gi|235000864|gb|EEP50288.1| ppic-type ppiase domain protein [Burkholderia pseudomallei MSHR346] Length = 265 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 22/180 (12%), Positives = 46/180 (25%), Gaps = 4/180 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 ++ + + L + R+ + + + + + Sbjct: 73 DDALDALLARELTPLPEPTRDACERYYLNHAARFRRRDIVYASHILFAVTDGTPLAPLRR 132 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNT 257 + + + ++ G LL D P+F Sbjct: 133 EAEATLARVLAEPQTFEARARELSNCPSAQVGGSLGQLLRGDSVPEFDAAVFDTTDSGVL 192 Query: 258 TNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T+ G + I + D A+ A ++A K +YV L S A I Sbjct: 193 PRLVNTRFGFHIVRIERRVPGDPVPFDAVAAEIAAFLAERVRHKAIQQYVTILASGARIE 252 >gi|206580899|ref|YP_002241159.1| peptidyl-prolyl cis-trans isomerase C [Klebsiella pneumoniae 342] gi|206569957|gb|ACI11733.1| peptidyl-prolyl cis-trans isomerase C [Klebsiella pneumoniae 342] Length = 93 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 1/83 (1%) Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKS 253 Q +K + R + ++++ G + + F Q + Sbjct: 11 QVKEEKLAHEILAKLERGISFDHLAKRYSKCPSGRHGGDLGEFPQGTMVGPFDQAVFSCP 70 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 P T+ G I + +R Sbjct: 71 LLKPYGPVKTKFGYHIIKVLYRR 93 >gi|146299175|ref|YP_001193766.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacterium johnsoniae UW101] gi|146153593|gb|ABQ04447.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacterium johnsoniae UW101] Length = 699 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 27/257 (10%), Positives = 61/257 (23%), Gaps = 18/257 (7%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 I+D DI + + + E + L+ + KQ+ + Sbjct: 207 KISDSDIVDYMKKNEKKFKADETRE-IQYVLVEDKASKQDEADIKAKITALLSGSVVYNA 265 Query: 110 ARNTGLSAEDFSSFLD--------KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 + F + + D+ + A+ ++ D + + + Sbjct: 266 KTGKNDTLPGFRNATNIAEFVNANSDVPYDSTYVPKNALPAVDADKLFSLPAGAIYGPYV 325 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE---------ESRLRL 212 + I Q +KR K+ + + Sbjct: 326 YGKYYAISKSLGFKAGVNAKASHILIGYEGSQTPNQKEKRTKEEAKAKAEEILAQVQSNP 385 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 + G Y + + F + + + T G I I Sbjct: 386 DSFMMLAFTSSDDSSAQQGGDLGYFGQGQMVKPFNDFVFNNGIGKVGLVETPFGFHVIKI 445 Query: 273 CDKRDLGGEIALKAYLS 289 DK+D + + Sbjct: 446 TDKQDGIRLATIAQKIE 462 >gi|323336931|gb|EGA78188.1| Ess1p [Saccharomyces cerevisiae Vin13] Length = 190 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 15/193 (7%), Positives = 45/193 (23%), Gaps = 12/193 (6%) Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 LI + + + + D + S + F + + Sbjct: 6 LIPTHNRLRHHNDAPMPSDVASSTGLPTPWTVRYSKSKKREYFFNPETKHSQWEEPEGTN 65 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + + L + I + Q+ Sbjct: 66 KDQLHKHLRDHPV--RVRCLHILIKH---------KDSRRPASHRSENITISKQDATDEL 114 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT 258 K + + + ++ + G + ++ P F++ + + Sbjct: 115 KTLITRLDDDSKTNSFEALAKERSDCSSYKRGGDLGWFGRGEMQPSFEDAAFQLKVGEVS 174 Query: 259 NPYVTQKGVEYIA 271 + + GV I Sbjct: 175 DIVESGSGVHVIK 187 >gi|167855404|ref|ZP_02478170.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus parasuis 29755] gi|167853470|gb|EDS24718.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus parasuis 29755] Length = 624 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 22/282 (7%), Positives = 71/282 (25%), Gaps = 21/282 (7%) Query: 53 DGDISKRIALLKLQKINGELEKIAV---------------QELIVETLKKQEIEKSGITF 97 +I A + K N L + A+ + ++ +++ + S Sbjct: 117 KSEIVNSPAFQQDGKFNNNLYQQALRNNGLTADGYAAIVYEGMLFAQIQEAIVNSSFTVP 176 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + + R L+ + ++ Q + Y + + Sbjct: 177 AQQELLAKLLLQKRQVRLATYSIAKEVNNQTASTEEMQAYYEANKANFVNPEKLTVEYIS 236 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV--QKRIKDAEESRLRLPKD 215 ++ Q Y ++ V + + ++ + Sbjct: 237 IEPKDLANKIQVTNEQIDTYYQTNKAKYTTKGEAKIAHIQVATEAEANEIVQALAKGEDF 296 Query: 216 CNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 + + + G + F++ T+ P I + Sbjct: 297 AQLAKAKSQDKLSAAQGGDLGWAKAGVFPKAFEDAANMLDAGKTSQPIKVDNAFHIIKVL 356 Query: 274 DK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++ + +KA ++ + + +++ + A Sbjct: 357 ERNVETVVPLEKVKAQITDTIRNELLLTEYSNITREMANVAF 398 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 16/182 (8%), Positives = 49/182 (26%), Gaps = 21/182 (11%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ ++ F L+ V + +NGE I+ S+ Sbjct: 1 MIEKMHEKSGGWV--FKIIFALVSLSFVLGGIGGGLMATDNSVAKVNGEEISQQVFSRAK 58 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + L+ + L +Q + I ++ + Sbjct: 59 NQQQNILNAQLGERFWDLMDNPIYVKQFHESILNGLVDDELLRQYAKSLKIDVSADQIKS 118 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 ++ + + L G+ + + + ++ + + + Sbjct: 119 EIVNSPAFQQDGKFNNNLYQQALRNNGLTADGYAAIVYEGMLFAQIQEAIVNSSFTVPAQ 178 Query: 162 EI 163 + Sbjct: 179 QE 180 >gi|21554407|gb|AAM63512.1| peptidyl-prolyl cis-trans isomerase-like protein [Arabidopsis thaliana] Length = 299 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 13/117 (11%), Positives = 41/117 (35%), Gaps = 3/117 (2%) Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 + + ++ L + + +++ G ++ + P+F+ K++ + Sbjct: 109 ELFAELQKKFLDGEEMSDLAAEYSICPSKKDGGILGWVKLGQMVPEFEEAAFKAELDQVV 168 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 TQ G+ + + +R+ +I + L ++ + +R I Sbjct: 169 RCRTQFGLHLLQVLSEREPVKDIQV-EELHSKMQDPVFMDEAQ--LIDVREPNEIEI 222 >gi|224143511|ref|XP_002336050.1| predicted protein [Populus trichocarpa] gi|222869555|gb|EEF06686.1| predicted protein [Populus trichocarpa] Length = 141 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 9/103 (8%), Positives = 29/103 (28%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R +L + + + + ++ + +++ G Sbjct: 40 TYVKARHILCEKQGKINEAYQKL-QDGWLSNGDKVPPAEFAKLASEYSECPSGKKGGDLG 98 Query: 236 YLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + FQ+ T+ P+ + G I +++ Sbjct: 99 WFPRGKMAGPFQDVAFATQIGATSAPFKSTHGYHVILCEGRKN 141 >gi|224098920|ref|XP_002311318.1| predicted protein [Populus trichocarpa] gi|222851138|gb|EEE88685.1| predicted protein [Populus trichocarpa] Length = 148 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 9/103 (8%), Positives = 29/103 (28%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R +L + + + + ++ + +++ G Sbjct: 47 TYVKARHILCEKQGKINEAYQKL-QDGWLSNGDKVPPAEFAKLASEYSECPSGKKGGDLG 105 Query: 236 YLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + FQ+ T+ P+ + G I +++ Sbjct: 106 WFPRGKMAGPFQDVAFATQIGATSAPFKSTHGYHVILCEGRKN 148 >gi|18419898|ref|NP_568372.1| rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein [Arabidopsis thaliana] gi|13877805|gb|AAK43980.1|AF370165_1 putative peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gi|16323478|gb|AAL15233.1| putative peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gi|332005309|gb|AED92692.1| rhodanese and PPIC-type PPIASE domain-containing protein [Arabidopsis thaliana] Length = 299 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 41/117 (35%), Gaps = 3/117 (2%) Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 + + ++ L + + +++ G ++ + P+F+ K++ N Sbjct: 109 ELFAELQKKFLDGEEMSDLAAEYSICPSKKDGGILGWVKLGQMVPEFEEAAFKAELNQVV 168 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 TQ G+ + + +R+ +I + L ++ + +R I Sbjct: 169 RCRTQFGLHLLQVLSEREPVKDIQV-EELHSKMQDPVFMDEAQ--LIDVREPNEIEI 222 >gi|320540341|ref|ZP_08039993.1| putative peptidyl-prolyl cis-trans isomerase (rotamase D) [Serratia symbiotica str. Tucson] gi|320029661|gb|EFW11688.1| putative peptidyl-prolyl cis-trans isomerase (rotamase D) [Serratia symbiotica str. Tucson] Length = 628 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 33/357 (9%), Positives = 88/357 (24%), Gaps = 86/357 (24%) Query: 43 RTTINGEVITDGDISKRIALLKLQKIN----------------GELEKIAVQELIVETLK 86 +NG+VI + + + + + + + +LI L Sbjct: 42 AAKVNGQVIERAQLEQVFQSERQRMQQQLGDQFSVLAGNEGYMQRMRQQVLSQLIDNMLL 101 Query: 87 KQEIEKSGITFDSNTVNYFF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 Q +K G++ + + + L G + F Q + Q + Sbjct: 102 AQYAKKLGLSVSDEQIKNAIRKTPYFQTDGQFDNAKYLDLLGSMGYTVDDFAQSMRQQLV 161 Query: 144 WPDVVKN---------------------------------DFMLKYGNLEMEIPANKQKM 170 V + K + E+ A Q+ Sbjct: 162 NQQVTQAFGESGFMLPAESQAMAALLLQQRNVRLATIDLSALQAKQNVSDDELKAYYQQN 221 Query: 171 KNITVREYLIRTV-------------------LFSIPDNKLQNQGFVQKRIKDAEESR-- 209 +N + I+ + + D + G +++ + + Sbjct: 222 QNSFIAPEQIKVSYISIDAVSMQDKVKVSDTDISAYYDRHKSSYGQPERKNYSVIQLKTE 281 Query: 210 ----------LRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 + + ++ I + G+ L + + + + Sbjct: 282 TEANAVLSELKKGGDFATLAKDKSTDIISRRTGGELGLLEPETTADELKQAHLTEKGQLS 341 Query: 259 NPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + G + + D + + ++ Q K +K+ + A Sbjct: 342 SVVNSSIGYLIVRLNDIEPEKMKPLSDVHETIAKQVRREKAIDAYYALQQKVSAAAT 398 >gi|288937797|ref|YP_003441856.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Klebsiella variicola At-22] gi|290513193|ref|ZP_06552555.1| peptidyl-prolyl cis-trans isomerase C [Klebsiella sp. 1_1_55] gi|288892506|gb|ADC60824.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Klebsiella variicola At-22] gi|289774404|gb|EFD82410.1| peptidyl-prolyl cis-trans isomerase C [Klebsiella sp. 1_1_55] Length = 93 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 23/81 (28%), Gaps = 1/81 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K + R + ++++ G + + F Q + Sbjct: 13 KEEKLAHEILAKLERGISFDHLAKRYSKCPSGRHGGDLGEFPQGTMVGPFDQAVFSCPLL 72 Query: 256 NTTNPYVTQKGVEYIAICDKR 276 P T+ G I + +R Sbjct: 73 KPYGPVKTKFGYHIIKVLYRR 93 >gi|256828005|ref|YP_003156733.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfomicrobium baculatum DSM 4028] gi|256577181|gb|ACU88317.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfomicrobium baculatum DSM 4028] Length = 93 Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 7/71 (9%), Positives = 19/71 (26%), Gaps = 1/71 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQ 264 ++ ++ G + +F Q ++ P TQ Sbjct: 22 KKITEEGGDFAEIARNYSQCPSGKRGGDLGTFGPGQMVAEFDQVCFNEAVGVVHGPVKTQ 81 Query: 265 KGVEYIAICDK 275 G + + ++ Sbjct: 82 FGFHLVEVTER 92 >gi|218262309|ref|ZP_03476823.1| hypothetical protein PRABACTJOHN_02497 [Parabacteroides johnsonii DSM 18315] gi|218223460|gb|EEC96110.1| hypothetical protein PRABACTJOHN_02497 [Parabacteroides johnsonii DSM 18315] Length = 532 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 15/150 (10%), Positives = 45/150 (30%), Gaps = 4/150 (2%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 K + ++ D+ + R ++ + ++++S Sbjct: 224 KIHSRKQNPGLVRVAHVLIPFEKDSVKFGEAETLARAEEVYQKAKDGADFAELAKEYSSD 283 Query: 226 I-HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 G+ ++ F+ + + P T+ G I + +K+ L Sbjct: 284 AGSAKRGGELPAFGVGEMVEPFEVAAFALNTPGELSRPVKTRFGYHIIKLIEKKGLPSFE 343 Query: 283 ALKAYLSAQNTPTKIE-KHEAEYVKKLRSN 311 K S Q + ++ + ++++ Sbjct: 344 DKKKGWSRQMAQGERNFEYYGAFDERMKKE 373 Score = 40.8 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 22/262 (8%), Positives = 60/262 (22%), Gaps = 40/262 (15%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 +L++ + ++ + + + T+ G+ I + Sbjct: 10 LLVLSLVFACMTGNAQVPADSVVMTVAGKQIPLDEF------------------------ 45 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + S + +V+ +N L + + Sbjct: 46 -----IFIAQKNSEVNLSDRKSVNAYVELFKNFKLKVAEAEDLELDKTKAFKDELDSYRA 100 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q + + + E A + L + ++ V + Sbjct: 101 QLTSSYL---------SDKDGEEAAVRAIYDRYGEVLELSHILFRLPQRTLSKDTVPVYQ 151 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ--YLLESDLHPQFQNLLKKSQNNTT 258 + +A E ++ + + L + + + Sbjct: 152 KAIEAYERIQAGEDFATVGKELKEADKENVGYEYVHCLLPMQTVKAFENVAYSMPVGSVS 211 Query: 259 NPYVTQKGVEYIAICDKRDLGG 280 P T G I I ++ G Sbjct: 212 LPVRTTMGFHIIKIHSRKQNPG 233 >gi|34556608|ref|NP_906423.1| hypothetical protein WS0160 [Wolinella succinogenes DSM 1740] gi|34482322|emb|CAE09323.1| conserved hypothetical protein [Wolinella succinogenes] Length = 279 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 103/295 (34%), Gaps = 25/295 (8%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + + + + + + + I +N + +T ++ K L + ++ A++ L Sbjct: 5 IFLSLGLCASMVLAAPTLVNGISFYVNNQPVTLLELYKTAQLANVS------KERAMEML 58 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I + L + EIE+ GI+ + VN + A++ G + E F SFLD++G+ +K+ L Sbjct: 59 IDKMLHQDEIERYGISTNEIEVNQEVERIAKSNGATLEQFRSFLDQKGVNWESYKEDLKE 118 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + + + E N + R + + K Sbjct: 119 KVLKDKLYDKIVANNLRMAD-ERELVAYYESNKNLFSIPARIETIKYSSKNQEALVSLLK 177 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260 + + P+ + + QF + +++ T Sbjct: 178 NPLSQPKGLISEPETILTQKINPKLAALLQETPLG---------QFTQIFTIGEDHLTFL 228 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++ + I + K + + K +K E+ +KLR++A + Sbjct: 229 VKSKGDLVLI---------PFESAKEAVFHRLMMEKEDKVIREHFEKLRASAKVK 274 >gi|110639457|ref|YP_679666.1| peptidyl-prolyl cis-trans isomerase [Cytophaga hutchinsonii ATCC 33406] gi|110282138|gb|ABG60324.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Cytophaga hutchinsonii ATCC 33406] Length = 130 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 12/112 (10%), Positives = 27/112 (24%) Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + P + Q + + ++ S Sbjct: 17 CAKVATEHPCPAVEASHILTPAESPEQFENAQDTAEVIIAKLKNGESFSDLALQYGSDGT 76 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 G + + F++ + N TQ GV + + K+D+ Sbjct: 77 KTQGGNLGWFTRGMMVQPFEDSCYNATINKPLIVKTQFGVHVVKVTGKKDIP 128 >gi|187251884|ref|YP_001876366.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Elusimicrobium minutum Pei191] gi|186972044|gb|ACC99029.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Elusimicrobium minutum Pei191] Length = 390 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 97/332 (29%), Gaps = 62/332 (18%) Query: 47 NGEVITDGDISKRIALLKLQKI------------NGELEKIAVQELIVETLKKQEIEKSG 94 NG+ I D K + Q +LEK + ++I + L Q EK G Sbjct: 33 NGKPILQSDFDKVAGAFEAQYTAAAPKLMEQPGVKLKLEKEVLDQMINDELLFQAAEKEG 92 Query: 95 ITFDSNTVNYFFVQHAR-------------NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + + ++ Q + + F + L K+GI F+ L Q Sbjct: 93 VKAREDEIDEAVKQAKDALIPAADEKGKPISEKERTKQFDAALKKEGISQKQFRDKLKKQ 152 Query: 142 SIWPDVVKNDFMLKYGNLEM-------------------------------EIPANKQKM 170 + V+ + K +E E+ A ++ Sbjct: 153 IMSRKYVETAIVTKVKPVEEADAKALYDQVKAVMKKDSKKTALIKPEEHKKEVEAIAMRL 212 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--HD 228 + ++ + I + P ++ ++ + + ++ D + + S Sbjct: 213 EQLSAPKVRIGHIFLEAPKAAGADKIKEKEALAKEIKKKIDGGMDFSTAVRQFSDDKNSQ 272 Query: 229 VSIGKAQYLL--ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIAL 284 + G + + ++P T G I I +K + + Sbjct: 273 STGGDMILIKGAPNTPKEIDTKAFSLDVGKVSDPIKTDFGFHIIKIKEKSAAEEITYEKV 332 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 +I+ E++K L S A I Sbjct: 333 AREFGQYIAAQRIQVAINEHIKDLNSKAEIKI 364 >gi|256822557|ref|YP_003146520.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Kangiella koreensis DSM 16069] gi|256796096|gb|ACV26752.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Kangiella koreensis DSM 16069] Length = 272 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 17/181 (9%), Positives = 57/181 (31%), Gaps = 5/181 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + D+++N+ + + E +Q + + + + Sbjct: 78 EEQAFQDLIENNINYQEVSDEDCQRYYEQNQAKFMTAPIMEVSHILLAVAPDDIEGRIEK 137 Query: 200 KRIKDAE--ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257 K + + + + + +++ + + G + + P+F+ L Sbjct: 138 KTVAEKLISKLLKDSSLFTDMVIEYSGCPSNKTGGSLGQISKGQTVPEFERQLFPLDEGI 197 Query: 258 T-NPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P ++ G + I K D + + + + ++Y+ +L ++ I Sbjct: 198 YDKPIESRYGYHIVFINKKIDGNQLEYSMVSEKIHDYLNVRRHRQAVSDYLYQLVEDSTI 257 Query: 315 H 315 Sbjct: 258 E 258 >gi|71660705|ref|XP_822068.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Trypanosoma cruzi strain CL Brener] gi|70887461|gb|EAO00217.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, putative [Trypanosoma cruzi] Length = 124 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 3/78 (3%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTT 258 R +A + + +++ S G + ++ FQ T Sbjct: 48 RAMEALKKINEGSSFADVAREYSED-KARSGGDLGWKRRGEMVGPFQEAAFALPKGGMTP 106 Query: 259 NPYVTQKGVEYIAICDKR 276 P T G I + DK+ Sbjct: 107 EPVKTSFGYHIILVEDKQ 124 >gi|226192799|pdb|3GPK|A Chain A, Crystal Structure Of Ppic-Type Peptidyl-Prolyl Cis-Trans Isomerase Domain At 1.55a Resolution. gi|226192800|pdb|3GPK|B Chain B, Crystal Structure Of Ppic-Type Peptidyl-Prolyl Cis-Trans Isomerase Domain At 1.55a Resolution Length = 112 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 10/98 (10%), Positives = 26/98 (26%), Gaps = 1/98 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 + +N+ V + E + +++ G ++ + Sbjct: 8 YRIGEIFLAATEENKPQVFANAEKIVEQLKQGGSFVAYARQYSEASTAAVGGDLGWIRLA 67 Query: 241 DLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRD 277 L + P + G + + DKR+ Sbjct: 68 QLPTELATTAASXGPGQLAGPVEIRGGFSILYLIDKRE 105 >gi|307250251|ref|ZP_07532205.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857692|gb|EFM89794.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 625 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 16/252 (6%), Positives = 53/252 (21%), Gaps = 15/252 (5%) Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH--ARNTGLSAEDFSSFLD 125 G L + +I E E + A+ Sbjct: 156 NEGMLFSQIQEGVIGSEFNVPEQEALLAKLLLQKRQVRLANYSIAKEATNQTASAEELQK 215 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + + + + + D + ++ +K K + R Sbjct: 216 YYDAHKSELIEPEKLTVEYVTLTPTDVANNVQVNDEQVKTYYEKNKADYATKGETRFAHI 275 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHP 244 + + E + ++ + G + Sbjct: 276 QLANETDAKAVA---------EQVKNGADFAELAKTKSTDKLSAAQGGDLGWAKAGTFPK 326 Query: 245 QFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHE 301 F+ + I + +++ + +K ++ + Sbjct: 327 AFEAAAASLQDGQVSAVVNVDGAYHIIKVLERKAETVIPLEQVKDQITKTIRQELLLTEY 386 Query: 302 AEYVKKLRSNAI 313 + +++ + A Sbjct: 387 SNIAREMANRAF 398 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 23/233 (9%), Positives = 61/233 (26%), Gaps = 23/233 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + F L+ V +NG IT + Sbjct: 1 MIENMHERTKGPV--FKIIFALVSLSFVITGIGTGLVGGDTAAVKVNGTEITQQAFNAAK 58 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + L+ E L +Q ++ + + + Sbjct: 59 NRQQSVLNAQMGERFWDLLDTPEYAKQFNQSVLNGLVDEELLRQYAKELKLGISAEQIKS 118 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 ++ S + + L G+ + + + ++ + + ++ Sbjct: 119 EIVNSPVFQQDGKFSNDLYQQTLRSNGLSADGYAAIVNEGMLFSQIQEGVIGSEFNVP-- 176 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 E A K+ + L + N+ + +QK + + K Sbjct: 177 EQEALLAKLLLQKRQVRLANYSIAKEATNQTASAEELQKYYDAHKSELIEPEK 229 >gi|144897804|emb|CAM74668.1| peptidyl-prolyl cis/trans isomerase [Magnetospirillum gryphiswaldense MSR-1] Length = 212 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 6/86 (6%), Positives = 20/86 (23%), Gaps = 1/86 (1%) Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + + +++ +I + + + G + +F Sbjct: 124 MHSSAERSKAEALAQINAIKADIAAGADFAKQAIDHSDCPSGREGGDLGDFGRGQMVGEF 183 Query: 247 QNLLKK-SQNNTTNPYVTQKGVEYIA 271 + ++ T G I Sbjct: 184 ETAAFALDVGQISDVVETPFGYHLIQ 209 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 13/138 (9%), Positives = 32/138 (23%), Gaps = 9/138 (6%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 S+ +++ I D + + + + G Sbjct: 13 MYQGSMRSTATRSKDEALAMITDLKAQIAKGADFAQLAAQNSDCPSGREGGDLGTFGPGM 72 Query: 242 LHP-QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 + P ++ ++ T G I R + +++ + Sbjct: 73 MVPDFDAAAFALAEGEISDVVETPFGFHLIQ----RTVPEAQIRASHILLMYEGSMHSSA 128 Query: 301 EAEYVKKLRS----NAII 314 E + L A I Sbjct: 129 ERSKAEALAQINAIKADI 146 >gi|255570207|ref|XP_002526064.1| rotamase, putative [Ricinus communis] gi|223534645|gb|EEF36341.1| rotamase, putative [Ricinus communis] Length = 294 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 9/108 (8%), Positives = 32/108 (29%), Gaps = 1/108 (0%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 K + + ++ + ++ G ++ + ++ P+F+ + Sbjct: 98 EDDLKLLVELQQRIAGGEDLSDLAVDYSICPSKAEGGMLGWVRKGEMVPEFEEAAFNAPL 157 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSAQNTPTKIEKHEA 302 N T+ G + + R+ ++ + K + Sbjct: 158 NKVVKCKTKFGWHLLQVLSDREESVLKDIQPDEFHVKMQDPKFVEEAQ 205 >gi|241889428|ref|ZP_04776729.1| peptidylprolyl isomerase PrsA1 [Gemella haemolysans ATCC 10379] gi|241863971|gb|EER68352.1| peptidylprolyl isomerase PrsA1 [Gemella haemolysans ATCC 10379] Length = 312 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 33/275 (12%), Positives = 85/275 (30%), Gaps = 24/275 (8%) Query: 13 IKLLTTYFV-LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K + + + V ++ S + I + +T+ DI + I + Sbjct: 1 MKKFKKAILPIALSISVIGLAGCSAGGTKYISSKAGD--VTEKDIVESI-------GASQ 51 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L K A +I + L +K D +++ + G + +Q + Sbjct: 52 LSKTATSMMIQKVLL----DKYKNKIDQKSIDEQLQKAQEQYGGKDKF------EQLLKQ 101 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 F + + + Y E + I + S + Sbjct: 102 QGFTLDKYKDGLKVKAAQTLLINDYAGTNDEKLKESYEKNKHQYHLAHILISVKSESNPN 161 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLE--SDLHPQFQN 248 + +K+ +D + ++ + + + G + + + +F++ Sbjct: 162 GLSDEEAKKKAEDVLKKLKDGGDFATLAKENSNDTANASNGGDLGWSSKEDNSFVKEFKD 221 Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 S++ T++ T G I + D++D + Sbjct: 222 AAYALSKDKTSDVVKTSFGYHIIKVLDEKDSSFDE 256 >gi|163751092|ref|ZP_02158322.1| peptidyl-prolyl cis-trans isomerase C [Shewanella benthica KT99] gi|161329048|gb|EDQ00120.1| peptidyl-prolyl cis-trans isomerase C [Shewanella benthica KT99] Length = 92 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 26/78 (33%), Gaps = 1/78 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 +++ + ++ L + + +S G + +F ++ + N Sbjct: 14 EEKCEALKQEILGGADFADVAKANSSCPSSAQGGDLGSFGPGMMVKEFDAVVFHAPLNEV 73 Query: 258 TNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 74 QGPVKTQFGYHLLEVTSR 91 >gi|95930881|ref|ZP_01313612.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfuromonas acetoxidans DSM 684] gi|95133123|gb|EAT14791.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfuromonas acetoxidans DSM 684] Length = 664 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 30/265 (11%), Positives = 76/265 (28%), Gaps = 18/265 (6%) Query: 57 SKRIALLKLQKINGELEKIAVQE--LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 + I++L Q++ EL + ++ L+ T + E D ++ + Sbjct: 155 EQYISVLSYQRMTPELFEQMQKQQMLVNLTQAQIRSEAVVTDEDVADEYRRLNENVNLSY 214 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----------NDFMLKYGNLEMEIP 164 ++ + + D Y A Q + + D++ + E +I Sbjct: 215 VAFKTGAFTDAVDVTDDALTAYYEANQEAFRVAQQVNLSLVTLSPADYLDQVVLEEGDIQ 274 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL--PKDCNKLEKF 222 + + IP + + +K+ AE+ + +++ Sbjct: 275 RYYDRHLATYAIPEQMAAAHILIPVAQDADDAQREKQRVLAEQVLEKAQTGDFAKLAKQY 334 Query: 223 A-SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN-TTNPYVTQKGVEYIAICDKRDL-- 278 + G + P F+ Q + + T+ G I + + Sbjct: 335 SADTATAQKGGDLGLFQRGVMDPAFEAAAFALQKDALSPIVETRFGYHIIKGGEHIEAGF 394 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAE 303 ++ + + K E Sbjct: 395 TPLADVRDEVEKALRLDEARKLAYE 419 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 14/196 (7%), Positives = 54/196 (27%), Gaps = 18/196 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR---IRTTINGEVITDGDIS 57 M + + + + ++ F + + R + +NG I+ Sbjct: 19 MLDLIRKKQKTTVVKVVFWVIIATFIGTIFLVWGKGRDQQRDITVAAQVNGTDISFEQFR 78 Query: 58 KRI-------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + +L + ++ LI + L +E E+ ++ + + Sbjct: 79 TTYSNMYNLYHNLYGQNFTPELEKQLQLTRQSINLLIDQALLLEEAERMHVSISDDELVK 138 Query: 105 FFVQHARNTGLSAEDFSSFLD--KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + + ++ + + Q + ++ + + + + Sbjct: 139 AIAEVPAFQVDGVFNKEQYISVLSYQRMTPELFEQMQKQQMLVNLTQAQIRSEAVVTDED 198 Query: 163 IPANKQKMKNITVREY 178 + +++ Y Sbjct: 199 VADEYRRLNENVNLSY 214 >gi|325981594|ref|YP_004293996.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas sp. AL212] gi|325531113|gb|ADZ25834.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas sp. AL212] Length = 93 Score = 62.4 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 6/80 (7%), Positives = 23/80 (28%), Gaps = 1/80 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 +++ + + ++ + G+ + +F ++ + Sbjct: 12 KTEEQCNNLKAEIESGADFGTLAQEHSLCPSGKQGGELGEFGRGQMVQEFDTVVFSAPVG 71 Query: 256 NTTNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 72 EVQGPVKTQFGYHLLEVTQR 91 >gi|148925955|ref|ZP_01809642.1| major antigenic peptide PEB3\cell binding factor 2 [Campylobacter jejuni subsp. jejuni CG8486] gi|145844941|gb|EDK22045.1| major antigenic peptide PEB3\cell binding factor 2 [Campylobacter jejuni subsp. jejuni CG8486] Length = 207 Score = 62.4 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 23/203 (11%), Positives = 64/203 (31%), Gaps = 8/203 (3%) Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + + + + A +I +V + + ++ A + K+ V+ Sbjct: 7 QDAKKQNLEKDPLYTKELDRAKDAILVNVYQEKILNTIKIDAAKVKAFYDQNKDKYVKPA 66 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 ++ + K + + +E + + ++ + G+ + Sbjct: 67 RVQAKHILVATEKEAKDIINELKGLKGKELDAKFSE---LAKEKSIDPGSKNQGGELGWF 123 Query: 238 LESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNT 293 +S + F + +N TT P T G I + + +K + Sbjct: 124 DQSTMVKPFTDAAFALKNGTITTTPVKTNFGYHVILKENSQAKGQIKFDEVKQGIENGLK 183 Query: 294 PTKIEKHEAEYVKKLRSNAIIHY 316 + +K + + L ++A + Y Sbjct: 184 FEEFKKVINQKGQDLLNSAKVEY 206 >gi|330721601|gb|EGG99623.1| Peptidyl-prolyl cis-trans isomerase ppiC [gamma proteobacterium IMCC2047] Length = 93 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 8/81 (9%), Positives = 24/81 (29%), Gaps = 1/81 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 +++ + + ++ +S G + +F + + N Sbjct: 13 TEEQCQQIKTDIENGADFGEMAKQHSSCPSGGRGGDLGEFGPGQMVREFDEVVFSAPLNT 72 Query: 257 TTNPYVTQKGVEYIAICDKRD 277 P TQ G + + + + Sbjct: 73 VQGPVKTQFGYHLLEVTSRTE 93 >gi|71277915|ref|YP_270304.1| peptidyl-prolyl cis-trans isomerase C [Colwellia psychrerythraea 34H] gi|71143655|gb|AAZ24128.1| peptidyl-prolyl cis-trans isomerase C [Colwellia psychrerythraea 34H] Length = 92 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 25/80 (31%), Gaps = 1/80 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 +++ + ++ ++ + G + P+F ++ + N Sbjct: 12 DTEEKCLALKAEIEAGKDFAEVAKEHSNCPSNAQGGDLGSFGPGQMVPEFDKVVFSAPLN 71 Query: 256 NTTNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 72 TVQGPVQTQFGYHLLEVTAR 91 >gi|289666150|ref|ZP_06487731.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 294 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 25/252 (9%), Positives = 65/252 (25%), Gaps = 12/252 (4%) Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 + + +I Q L + + + F+ + L + + + Sbjct: 32 RSNQAPVLQIGKQSLDAQEYRALALAGLPQDFNPASAADPEFVREFADRLLLVEQARRVH 91 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 Q + A +I V+ +I A + +L + Sbjct: 92 LQDDPVVAARIRQATDAILAKAVQTRARESARIDASQIKAQFDAHPHDYDEVHLSHLFVA 151 Query: 186 SIPDNKLQ-----NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKA-QYLL 238 P + + R + ++ + + G+ L Sbjct: 152 LKPQGEARRGTPLTDAQALARAQRLKQQLESGTPFAELAMRESDDGSTAAEGGELSPIFL 211 Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 + + + + P +G I + +R + A Q + Sbjct: 212 RNVADAFVAPVQDLAVGQVSAPVRGPEGYHLIRVDARRPATLDSA-----RGQIEVQLRD 266 Query: 299 KHEAEYVKKLRS 310 + A+ +++LR Sbjct: 267 QAAADALEQLRQ 278 >gi|118595140|ref|ZP_01552487.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylophilales bacterium HTCC2181] gi|118440918|gb|EAV47545.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylophilales bacterium HTCC2181] Length = 262 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 86/305 (28%), Gaps = 52/305 (17%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG--DISKRIALLKLQKINGEL 72 ++ YF I+ I S A ++N + I + K + Q+++ ++ Sbjct: 1 MIRLYFYSILVLSALIHSSFINAE----IASVNDKQIKSSYLEFIKTEVSKQGQQVDKKM 56 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 E+ V LI + Q+ SG+ + V Sbjct: 57 ERTIVNRLIDLEVINQKARSSGLLSNERVVAQA--------------------------- 89 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 L+ Q + + D+++ E E+ + K + + NK Sbjct: 90 ----ELSNQELIYTLYLQDYIINNPVTEEEVATAYNQYKAAFNESEFKASHILLTSKNKA 145 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHP-QFQNLL 250 + + +K + + G + + + F + Sbjct: 146 E----------LIIKKLDAGESFGVLAKKESEDNDTKNNNGDLGWFSKETMVQSIFDAVK 195 Query: 251 KKSQNNT-TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 P TQ G I + D R L E + + +++ LR Sbjct: 196 NTGSGEIFPKPVKTQFGWHVIKVDDVRPLEVETFAQKE--EFIKTELQKIKLKQHLSLLR 253 Query: 310 SNAII 314 S A I Sbjct: 254 SGARI 258 >gi|307726843|ref|YP_003910056.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1003] gi|307587368|gb|ADN60765.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1003] Length = 259 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 14/166 (8%), Positives = 43/166 (25%), Gaps = 9/166 (5%) Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE-----ESRLR 211 E +R + G ++KR + E+ Sbjct: 79 EPTEDACRRYHAAQPGRFAVGERVRARHVLFAVTPGLDIGALRKRAESCLLELRCENGTV 138 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEY 269 + ++ G +L + P+F + + + ++ G+ Sbjct: 139 SDRFARVARDMSNCPSGAYGGDLGWLRIDECAPEFAKELFGRPDIGVLPHLVHSRFGLHV 198 Query: 270 IAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + ++ + ++ ++ +Y+ L A Sbjct: 199 VEVMERDPGIVPEFDTVREAVAQALRQQAFATALRQYISVLAGRAD 244 >gi|153809074|ref|ZP_01961742.1| hypothetical protein BACCAC_03382 [Bacteroides caccae ATCC 43185] gi|149128407|gb|EDM19626.1| hypothetical protein BACCAC_03382 [Bacteroides caccae ATCC 43185] Length = 515 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 31/299 (10%), Positives = 80/299 (26%), Gaps = 43/299 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 ++ ++ F I + A + +NG+ I + Sbjct: 1 MMKRGLLVAWFWFFGISVF---AQEDPVLMRVNGKDILRSEFE----------------- 40 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 D+ + + + L E Sbjct: 41 -------------YSYRHRTGNADAKLSPKEYAELFAQSKLKVEAAKVAGLDTTTMFRKL 87 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 ++ Q + + + + + + I + +P Sbjct: 88 QEAWRSQLLKSYLTDKQVLDSCIRV-----LYQDRGLKGLGSRVRIMQIFKYLPQTITAK 142 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-S 253 +K D+ LR D + D +L +F+N+ S Sbjct: 143 HLEEEKNRIDSIWQSLRTQSDLDFARLVEMYSEDKRSM---WLERLQTTSEFENVAFSLS 199 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK-IEKHEAEYVKKLRSN 311 ++P+ T +G+ I + D+++ + L+ + + ++K V++L+ + Sbjct: 200 TGEISHPFFTPEGLHIIKVIDRKENPSYGEVYEKLAERLIRKEGVDKATETIVERLKRD 258 >gi|148244746|ref|YP_001219440.1| peptidyl-prolyl cis-trans isomerase D [Candidatus Vesicomyosocius okutanii HA] gi|146326573|dbj|BAF61716.1| peptidyl-prolyl cis-trans isomerase D [Candidatus Vesicomyosocius okutanii HA] Length = 615 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 19/251 (7%), Positives = 60/251 (23%), Gaps = 15/251 (5%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 L+ + + ++ + + + K Sbjct: 153 QELRRTQIKSNLLDSAFITPSQLLRLQKLNDQKRKFSYIIIQTDNHIKEVKVDAQSVKDF 212 Query: 129 IGDNHFKQYLAIQSIWP--DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + + Q ++ N+ K + E+ + + E + Sbjct: 213 YDNKKSLFFAPEQVKIEFIELSLNEIAKKIKVSDNELFNFYENEQENFTTEEERQAQHIL 272 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQ 245 + D + ++++ G + + P+ Sbjct: 273 LTDELTA---------QKVVTLLDNGGDFVKLAKQYSQDSGSKDDAGNLGFFTRGIMVPE 323 Query: 246 FQNLLK-KSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEA 302 F+ + ++ ++ G I + + + L K + + +K Sbjct: 324 FEKKVFAMKSGEVSDLVKSKFGYHIIKLNNIKVKTLKSFDIAKQEILDLYIQKQAQKVFY 383 Query: 303 EYVKKLRSNAI 313 ++L S A Sbjct: 384 NLTEQLASLAY 394 Score = 44.3 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 30/267 (11%), Positives = 85/267 (31%), Gaps = 15/267 (5%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + +I L ++I F + I Y + A + + + +G I+ + Sbjct: 1 MLVSIRNKTKGWISYLIIGLIIIPFALFGISEYFTGASNIK-VASFDGVDISKEEFLSEF 59 Query: 61 ALLKLQKING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 K L++ + +++ + L +Q K ++ +N Sbjct: 60 NPQKRWLQKELDKKYDKKFDFILKQSILNQMLNKHLLEQLSRKLSYETTTSELNNII--- 116 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 N E S + + + ++I ++ + I ++ Sbjct: 117 RANDLFKEEGRFSLEKYKKLLRLNGYTTEKYETIKLQELRRTQIKSNLLDSAFITPSQLL 176 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + + + DN ++ + +KD +++ L +++ ++ Sbjct: 177 RLQKLNDQKRKFSYIIIQTDNHIKEVKVDAQSVKDFYDNKKSLFFAPEQVKIEFIELSLN 236 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNN 256 I K + +++L ++N + Sbjct: 237 EIAKKIKVSDNELFNFYENEQENFTTE 263 >gi|167577892|ref|ZP_02370766.1| peptidylprolyl isomerase [Burkholderia thailandensis TXDOH] Length = 265 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 42/161 (26%), Gaps = 4/161 (2%) Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + + + + + + + ++ +R Sbjct: 92 HDDCERYYRNHAARFRRHDIVHASHILFAVTDATPLALLRREAEAALARARAAPQTFETL 151 Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDK- 275 + ++ G LL D P+F T+ G + I + Sbjct: 152 ARELSNCPSSAVGGNLGQLLRGDSVPEFDAAVFDTPELGVLPRLVNTRFGFHIVRIERRV 211 Query: 276 -RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 D A+ A ++A K +YV L S A I Sbjct: 212 PGDPVPFDAVAADIAAFLAQRVRHKAIQQYVTILASGARIE 252 >gi|167616017|ref|ZP_02384652.1| peptidylprolyl isomerase [Burkholderia thailandensis Bt4] gi|257142572|ref|ZP_05590834.1| peptidylprolyl isomerase [Burkholderia thailandensis E264] Length = 265 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 41/161 (25%), Gaps = 4/161 (2%) Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + + + + + + + ++ + Sbjct: 92 HDDCERYYRNHAARFRRHDIVHASHILFAVTDATPLALLRREAEAALARALAAPQTFETL 151 Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDK- 275 + ++ G LL D P+F T+ G + I + Sbjct: 152 ARELSNCPSSAVGGNLGQLLRGDSVPEFDAAVFDTPELGVLPRLVNTRFGFHIVRIERRV 211 Query: 276 -RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 D A+ A ++A K +YV L S A I Sbjct: 212 PGDPVPFDAVAADIAAFLAQRVRHKAIQQYVTILASGARIE 252 >gi|117929118|ref|YP_873669.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidothermus cellulolyticus 11B] gi|117649581|gb|ABK53683.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidothermus cellulolyticus 11B] Length = 321 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 26/275 (9%), Positives = 60/275 (21%), Gaps = 41/275 (14%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL----- 63 + + L + + T+ ITD + K ++ Sbjct: 1 MRRWHSPLLAAMLGTAALAISACGPAHPGA----AATVGDVRITDAQVQKAANVMLQDSG 56 Query: 64 ---KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 Q L + + LI + L ++ G+T V + + G Sbjct: 57 TRAAAQADPAGLRRDVLTRLIKDVLLQRAAASRGVTVSEADVQHELALAEQQEG------ 110 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 Q + + +T + + Sbjct: 111 -----------------SRAQLEAAAASNGIAAADLHDYLYYYLLEQGLAAALTKDQVVA 153 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 + I V + ++++ + G + Sbjct: 154 VAHVKVISLTDKSTADTVLAK------VTANPGDFAQLAKQYSQDQSAANGGDVGEVPID 207 Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 L + ++ NT G I + D+ Sbjct: 208 GLSDPLKTDIQNKPLNTPFLESDSSGYYIIMVVDR 242 >gi|83717644|ref|YP_439449.1| peptidylprolyl isomerase [Burkholderia thailandensis E264] gi|83651469|gb|ABC35533.1| peptidylprolyl isomerase [Burkholderia thailandensis E264] Length = 250 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 41/161 (25%), Gaps = 4/161 (2%) Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + + + + + + + ++ + Sbjct: 77 HDDCERYYRNHAARFRRHDIVHASHILFAVTDATPLALLRREAEAALARALAAPQTFETL 136 Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDK- 275 + ++ G LL D P+F T+ G + I + Sbjct: 137 ARELSNCPSSAVGGNLGQLLRGDSVPEFDAAVFDTPELGVLPRLVNTRFGFHIVRIERRV 196 Query: 276 -RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 D A+ A ++A K +YV L S A I Sbjct: 197 PGDPVPFDAVAADIAAFLAQRVRHKAIQQYVTILASGARIE 237 >gi|167828135|ref|ZP_02459606.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei 9] Length = 190 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 44/174 (25%), Gaps = 5/174 (2%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 ++ + R ++ +++ + Sbjct: 4 LLARELTPLPEPTRDACERYYLNHAARFRRRDIVYASHILFAVTDATPLAPLRREAEATL 63 Query: 207 ESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVT 263 L P+ + ++ G LL D P+F T Sbjct: 64 ARVLAEPQTFEARARELSNCPSAQVGGSLGQLLRGDSVPEFDAAVFDTTDSGVLPRLVNT 123 Query: 264 QKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + G + I + D A+ A ++A K +YV L S A I Sbjct: 124 RFGFHIVRIERRVPGDPVPFDAVAAEIAAFLAERVRHKAIQQYVTILASGARIE 177 >gi|261343042|ref|ZP_05970900.1| peptidyl-prolyl cis-trans isomerase [Enterobacter cancerogenus ATCC 35316] gi|288314605|gb|EFC53543.1| peptidyl-prolyl cis-trans isomerase [Enterobacter cancerogenus ATCC 35316] Length = 93 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 24/81 (29%), Gaps = 1/81 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K +D E +K + G + + P F + + Sbjct: 13 KEEKLAQDLLEQLKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVL 72 Query: 256 NTTNPYVTQKGVEYIAICDKR 276 T P TQ G I + ++ Sbjct: 73 EPTGPLHTQFGYHVIKVLYRK 93 >gi|70730930|ref|YP_260671.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas fluorescens Pf-5] gi|68345229|gb|AAY92835.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas fluorescens Pf-5] Length = 93 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 25/82 (30%), Gaps = 1/82 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + + + + +K ++ G + +F ++ + N Sbjct: 12 ASEAKCNELKAEIEAGADFAEVAKKNSTCPSSRDGGNLGSFGPGQMVKEFDTVVFSAPVN 71 Query: 257 TT-NPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 72 VVQGPVKTQFGYHLLEVTSRQD 93 >gi|316956573|gb|EFV46854.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Trichinella spiralis] Length = 183 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 12/158 (7%), Positives = 32/158 (20%), Gaps = 2/158 (1%) Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 G + + P + + + + Sbjct: 23 GWEKRMSRKTGEPYYYNVYSHESQWRRP-TEPALPNMSSASSSSSSSTSRNEQVKCSHIL 81 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 + R + + + +E + K++ + G Sbjct: 82 VKHKNSRRPSSWKEAVITRSKEDALHLIQAYRDEISSGKAEFRTLASKYSDCSSAKNGGD 141 Query: 234 AQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270 Y + F+ + P T+ G+ I Sbjct: 142 LGYFKRGQMQKPFEEAAFALTLGELSQPVETESGIHII 179 >gi|209884190|ref|YP_002288047.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oligotropha carboxidovorans OM5] gi|209872386|gb|ACI92182.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oligotropha carboxidovorans OM5] Length = 274 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 31/278 (11%), Positives = 83/278 (29%), Gaps = 37/278 (13%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG VI I++ + + A + L+V L QE + G Sbjct: 14 AISVNGVVIAREAIAQEVQNHPA-DKPIHAWQAAARALVVRELLLQEAARLG-------- 64 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 ++ + + D ++ A ++ +V+ + + Sbjct: 65 ---------------------IETEPLCDPDGRRETAEEAAMRALVEREVKTPEPDEATC 103 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD--CNKLE 220 +Q ++ + + + + + + ++ + Sbjct: 104 RRFYEQHLQRFRTGDLYEVAHILIAASRGDEAARLAARASAETILAAVKADPHVFADMAS 163 Query: 221 KFAS-KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--- 276 ++ G+ + P+F+ +L++ Q T+ G + + D+R Sbjct: 164 NHSACSTSAAEGGRLGQITRGQTVPEFEAVLERMQPGEIAIAETRYGFHVVRM-DRRAEG 222 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K ++ + + A+Y+ L A I Sbjct: 223 QTLPFELAKERIAGYLAASVEHRALAQYISILAGQAEI 260 >gi|316964063|gb|EFV49351.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Trichinella spiralis] Length = 183 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 12/158 (7%), Positives = 32/158 (20%), Gaps = 2/158 (1%) Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 G + + P + + + + Sbjct: 23 GWEKRMSRKTGEPYYYNVYSHESQWRRP-TEPALPNMSSASSSSSSSTSRNEQVKCSHIL 81 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 + R + + + +E + K++ + G Sbjct: 82 VKHKNSRRPSSWKEAVITRSKEDALHLIQAYRDEISSGKAEFRTLASKYSDCSSAKNGGD 141 Query: 234 AQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270 Y + F+ + P T+ G+ I Sbjct: 142 LGYFKRGQMQKPFEEAAFALTLGELSQPVETESGIHII 179 >gi|257455225|ref|ZP_05620460.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enhydrobacter aerosaccus SK60] gi|257447187|gb|EEV22195.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enhydrobacter aerosaccus SK60] Length = 622 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 43/400 (10%), Positives = 97/400 (24%), Gaps = 89/400 (22%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN----GEVITDGDIS 57 + L ++ L+ I S + I+ Sbjct: 1 MESLRNFLKGWMGKALLVLFLLPLAITGFESIVRSGDDPNAVAKVAELNVDNATLQTMIN 60 Query: 58 KRIALLKLQ-------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 R L Q + +L + + LI L + + G T T+ + Sbjct: 61 NRRETLLEQVNGDASLLNSDKLREQMLHNLIDRYLIINQANQLGFTVSDATITQMLMAEK 120 Query: 111 ----RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP--------------------- 145 + S E F+S+L +G+ + + Sbjct: 121 TFQDASGKFSNELFASYLTSRGMTKEQLFDSVRQDLLVTAFSRGIINTGIFAQGSIDKLM 180 Query: 146 ------------DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + F + EI + QK + ++ + N L Sbjct: 181 SMQSESRPVQVLRLDWHSFAPQVQVTPQEIASYYQKNQATLKSSDMVDLTYLELNKNALP 240 Query: 194 NQGFVQKRIKDAEESRLRL----------------------------------PKDCNKL 219 + ++ +S L+ Sbjct: 241 VAAPTAQELQQQYQSYLKNSNNQTEYELAMILMNGSQAQATLTSLKSKLDANQADFAALA 300 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK----SQNNTTNPYVTQKGVEYIAICD 274 ++++ G + +S + ++ + T+P T G + Sbjct: 301 KQYSQDEGSKNDGGNIGPITQSMFPNDYDTIMTQIKTLKVGQVTSPIKTNYGYHLFKLVK 360 Query: 275 K--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + +L L+ Q K E + + K+ ++A Sbjct: 361 INGQTPPTIESLAPVLTEQIMAQKREAAYQDLIGKINNDA 400 >gi|217075350|gb|ACJ86035.1| unknown [Medicago truncatula] Length = 144 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 10/103 (9%), Positives = 28/103 (27%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R +L + +Q D + + ++++ G Sbjct: 43 TYVKARHILCEKQGKINEAYKKLQDGWLDNGDKVP-PAEFAKVAQEYSECPSGKKGGDLG 101 Query: 236 YLLESDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + P + T+ P+ + G I +++ Sbjct: 102 WFPRGKMAGPFQEVAFNTPVGVTSAPFKSTHGYHIILSEGRKN 144 >gi|299139204|ref|ZP_07032380.1| conserved hypothetical protein [Acidobacterium sp. MP5ACTX8] gi|298598884|gb|EFI55046.1| conserved hypothetical protein [Acidobacterium sp. MP5ACTX8] Length = 262 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 48/154 (31%), Gaps = 12/154 (7%) Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ----KINGELEKIAVQELI 81 + P + R+ +NG++I D D+++ L Q A++ LI Sbjct: 48 AVAPQMPLAQGMALDRVVAIVNGDLILDSDVNEETRLQVFQPYRNPNADTSRDRAIERLI 107 Query: 82 VETLKKQE--------IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +L Q+ I + D + + + + ++ FL G + Sbjct: 108 NRSLILQQLKLQPEDPITDDQVRKDLDNLRKNIPACKPYNCETPDGWNKFLATNGFTEAT 167 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + ++ F L EI + Sbjct: 168 LISRWRSRMEVLRFIEERFRLGIKVKPEEIKSYY 201 >gi|317053465|ref|YP_004119232.1| nitrogen fixation protein NifM [Pantoea sp. At-9b] gi|255761142|gb|ACU32741.1| nitrogen fixation cis-trans peptidyl prolyl isomerase [Pantoea sp. At-9b] gi|316953204|gb|ADU72676.1| nitrogen fixation protein NifM [Pantoea sp. At-9b] Length = 261 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 20/263 (7%), Positives = 69/263 (26%), Gaps = 8/263 (3%) Query: 54 GDISKRIALLKLQKI--NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 ++ +R + ++L + + + ++V +L Q + T + Sbjct: 2 SELWERFSRMQLAQTRWQCQPDSLSVSQLAEFNRLWQRQRQMEYAVAGATGEELIPETCL 61 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 ++ + + ++ + + + Sbjct: 62 ANMTTSLSPLLSTHDFSAAERLSIIQHHTRM---EIQLARVAEQAPVPDDLQVLAWYRRH 118 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 R + ++ + + + ++++ + Sbjct: 119 QGQFMRPEQRLCWHLLLTTDQDGPAVHRQMQQLRLQITNNRQAFSSLAQRWSHCPSALEG 178 Query: 232 GKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA--YL 288 G+ ++ L + L N + P TQ G + R A + Sbjct: 179 GRMGWIGRGLLYPELEEVLFAMKPNAVSQPIATQLGWHLLWCEMIRPPAPMEQEAALTRV 238 Query: 289 SAQNTPTKIEKHEAEYVKKLRSN 311 + T ++ + +++K+L Sbjct: 239 RSLLTRQNQQQWQRQWLKQLLEK 261 >gi|160947370|ref|ZP_02094537.1| hypothetical protein PEPMIC_01304 [Parvimonas micra ATCC 33270] gi|158446504|gb|EDP23499.1| hypothetical protein PEPMIC_01304 [Parvimonas micra ATCC 33270] Length = 328 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 30/323 (9%), Positives = 79/323 (24%), Gaps = 25/323 (7%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + + + L + S AM I + IT + K + + Sbjct: 1 MKNRFIKFASAIALSAMLLTACASAPRGAM-----VKIGEKYITKDQVQKEYDRVIVSYS 55 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + + K + + F + V + K Sbjct: 56 DEQKAKYDESTEEGKKASLTLKQNILDMFSNIEVVKQKFAKLEKEYKDEGKSEEEIAKVS 115 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + LA N+ + K E E+ + T + Sbjct: 116 VTEQEINDNLAKVKEQLGDKFNEELEKAKLTEDELKYKIEDNLYSTKFQTWFSENYDPTD 175 Query: 189 DNKLQNQG----------------FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SI 231 + ++ ++ K + K + + + + Sbjct: 176 EEIMEKYKGSDFDGPQINASHILVENEEDAKKVKSRLEAGEKFEDVATEVSKDPSAKKNK 235 Query: 232 GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYL 288 G + + +F + K ++P T+ G I + + + + K + Sbjct: 236 GVLGTFTKGVMVKEFYDAAVKLKVGEISDPVKTKFGYHIIKLNEIVEDYDKFSDESKKRI 295 Query: 289 SAQNTPTKIEKHEAEYVKKLRSN 311 + + + +K++ Sbjct: 296 KQNLKKSLLSEKFKTEFEKIQKE 318 >gi|261327012|emb|CBH09987.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, putative [Trypanosoma brucei gambiense DAL972] Length = 122 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 25/82 (30%), Gaps = 3/82 (3%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQ 254 R +A E N ++ S G ++ + +F + Sbjct: 42 EKLSRALEALEKIKAGESFANVARDYSED-KARSGGDLGWVTRGAMVGEFSEKAFALPKG 100 Query: 255 NNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + DK+ Sbjct: 101 GMTQEPVKTKFGYHIIFVEDKQ 122 >gi|72386957|ref|XP_843903.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Trypanosoma brucei TREU927] gi|62359031|gb|AAX79480.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, putative [Trypanosoma brucei] gi|70800435|gb|AAZ10344.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 122 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 25/82 (30%), Gaps = 3/82 (3%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQ 254 R +A E N ++ S G ++ + +F + Sbjct: 42 EKLSRALEALEKIKAGESFANVARDYSED-KARSGGDLGWVTRGAMVGEFSEKAFALPKG 100 Query: 255 NNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + DK+ Sbjct: 101 GMTQEPVKTKFGYHIIFVEDKQ 122 >gi|313901127|ref|ZP_07834615.1| PPIC-type PPIASE domain protein [Clostridium sp. HGF2] gi|312954085|gb|EFR35765.1| PPIC-type PPIASE domain protein [Clostridium sp. HGF2] Length = 332 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 44/326 (13%), Positives = 88/326 (26%), Gaps = 30/326 (9%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVS----------YKSWAMSSRIRTTINGEVITDGDISK 58 + K + +IF I S KS + IT ++ Sbjct: 2 IKILKKQWFVVLIALIFIGFAIFSVYDTNKGKLPGKSVDGKDVVAGLKGDVNITADEL-- 59 Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 L L E+I ++K + K + + A ++G AE Sbjct: 60 -YKNLSKTYGKSMLFMKFQAEVINSSIKTTDELKKTAEEYESNIKQSAESQAASSGTDAE 118 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 S Q + + + ++ND++ K+ + Sbjct: 119 ALISQNIAQYGFTSDQLYDYCMTVAKMEKMQNDYISKH-------LDELFTPIYKEKKSR 171 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 + +L + D + ++K E++ + + +K++ G Y+ Sbjct: 172 TVSHILIKMEDANKPTKKELEKVQ-KVEDALKKGDSFADVAKKYSDDGSASDGGYLGYMD 230 Query: 239 ESD--LHPQFQNLLKKSQNNTTNPYVTQ----KGVEYIAIC--DKRDLGGEIALKAYLSA 290 + K T++ G I + DK L + K L Sbjct: 231 SDTSYVDSFKNAAFKLKAKETSDWVKESNDSYNGWHLIKVEETDKAKLEKDKKAKDSLYK 290 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHY 316 E Y+ + I Y Sbjct: 291 AIANG-TENLSNTYLWEAAKKLDIKY 315 >gi|50084586|ref|YP_046096.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) [Acinetobacter sp. ADP1] gi|2623969|emb|CAA05330.1| putative peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. ADP1] gi|49530562|emb|CAG68274.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase) [Acinetobacter sp. ADP1] Length = 622 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 26/232 (11%), Positives = 66/232 (28%), Gaps = 6/232 (2%) Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 L+ + Q + + + +N ++ ++ + + +K Sbjct: 169 LVSKFDLHQIAVLQTEQRTIHLASIKLDDYKKNINVTNQEIADYYNKHKNKFKQVASVDV 228 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + E++ N + L++ +L + ++ Q Sbjct: 229 DYIVVSPAQVSSAPAAVTEAELQQAYNAFVETQKKDAKRLVKHILITA---DGRSDAEAQ 285 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNT 257 K D ++++ + G F ++ Sbjct: 286 KIANDVYAKIQAGTHFSEAAKQYSDDTSSKNNGGVVDAYQPGIFSKDFDQAVESLKNGQV 345 Query: 258 TNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + P TQ G I + + L A KA L+A+ +K + + +L Sbjct: 346 SKPVKTQYGYHIIEVETAQVKLPSLEAEKARLTAEIQKSKSANAYTDTINRL 397 Score = 58.1 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 35/318 (11%), Positives = 88/318 (27%), Gaps = 19/318 (5%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + ++ + L +V I Y + + T+NG+ I+ D+ Sbjct: 1 MESFRKVIKGWLGKVLLILFLTPLALVGIEGYFGGGNKADVAKTVNGQDISKKDLENLTK 60 Query: 62 LLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 K Q +E+ A+ LI +L Q+ EK GI+ + Q Sbjct: 61 TYKDQYLSLAKGDETLLNQSYIEENALNTLIARSLLLQQAEKLGISLSDAQIEKMLAQQP 120 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + + + + +A + D + + + ++ Sbjct: 121 SFQENGKFSETLYSNYLRSVGMTSQALIAS--LRQDHALKMLTSSVTDTALVSKFDLHQI 178 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 + + I + D K Q+ + + + + + + Sbjct: 179 AVLQTEQRTIHLASIKLDDYKKNINVTNQEIADYYNKHKNKFKQVASVDVDYIVVSPAQV 238 Query: 231 IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 + E++L + ++ + + + D R + + A Sbjct: 239 SSAPAAVTEAELQQAYNAFVETQKKDAKRLVK-----HILITADGRSDAEAQKIANDVYA 293 Query: 291 QNTP-TKIEKHEAEYVKK 307 + T + +Y Sbjct: 294 KIQAGTHFSEAAKQYSDD 311 >gi|163846602|ref|YP_001634646.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus aurantiacus J-10-fl] gi|222524398|ref|YP_002568869.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus sp. Y-400-fl] gi|163667891|gb|ABY34257.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus aurantiacus J-10-fl] gi|222448277|gb|ACM52543.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus sp. Y-400-fl] Length = 490 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 15/204 (7%), Positives = 43/204 (21%), Gaps = 28/204 (13%) Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + Q++ + + + R +L ++ Sbjct: 238 RQPELSKDEFRQALLDQYRERLLNEQIQ---ARLVPEDGFTYKTEAERVSARQILVAVTP 294 Query: 190 NKLQNQGFVQKRI-------KDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD 241 ++ ++ + + I + G + Sbjct: 295 PAEATPEQIEAAFAAALPAAQEIVAQLRNGADFATLAAERSDDIGSRENGGDIGSFDRNG 354 Query: 242 L--------HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293 N ++P TQ G + I D+ E Sbjct: 355 FADNGATYPPELVAAAFSLPVNQVSDPIRTQFGWHILEITDQTIPSQEEQ---------L 405 Query: 294 PTKIEKHEAEYVKKLRSNAIIHYY 317 + ++ + R+ A + + Sbjct: 406 SQARTEAFDRWIAEQRAAADVRRF 429 >gi|152972768|ref|YP_001337914.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238892379|ref|YP_002917113.1| peptidyl-prolyl cis-trans isomerase C [Klebsiella pneumoniae NTUH-K2044] gi|262040911|ref|ZP_06014137.1| peptidyl-prolyl cis-trans isomerase C [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330012127|ref|ZP_08307289.1| peptidyl-prolyl cis-trans isomerase [Klebsiella sp. MS 92-3] gi|150957617|gb|ABR79647.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238544695|dbj|BAH61046.1| peptidyl-prolyl cis-trans isomerase C [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041800|gb|EEW42845.1| peptidyl-prolyl cis-trans isomerase C [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328533942|gb|EGF60601.1| peptidyl-prolyl cis-trans isomerase [Klebsiella sp. MS 92-3] Length = 93 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 24/81 (29%), Gaps = 1/81 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K + R + ++++ + G + + F Q + Sbjct: 13 KEEKLALEILAKLERGVSFDHLAKRYSKCPSGRNGGDLGEFQQGAMVGPFDQAVFSCPLL 72 Query: 256 NTTNPYVTQKGVEYIAICDKR 276 P T+ G I + +R Sbjct: 73 KPYGPVKTKFGYHIIKVLYRR 93 >gi|127513398|ref|YP_001094595.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella loihica PV-4] gi|126638693|gb|ABO24336.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella loihica PV-4] Length = 92 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 22/78 (28%), Gaps = 1/78 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 ++ ++ L + +S G + +F + + N Sbjct: 14 EEECAQIKQQILDGADFGEMAKAHSSCPSGAQGGDLGSFGPGMMVREFDEVVFSAPLNEV 73 Query: 258 TNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 74 QGPVKTQFGYHLLEVTSR 91 >gi|41152183|ref|NP_957042.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Danio rerio] gi|37747984|gb|AAH59553.1| Protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 [Danio rerio] Length = 159 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 29/106 (27%), Gaps = 1/106 (0%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + R + + +Q K E+ + + + +F+ Sbjct: 50 KVRCSHLLVKHSQSRRPSSWREENITRSKDEALQLIQKYIEQIKSGEEEFESLASQFSDC 109 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + + P T GV I Sbjct: 110 SSARNGGDLGLFGRGQMQKPFEDASFALKVGDMSGPVFTDSGVHII 155 >gi|299132103|ref|ZP_07025298.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Afipia sp. 1NLS2] gi|298592240|gb|EFI52440.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Afipia sp. 1NLS2] Length = 274 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 30/277 (10%), Positives = 81/277 (29%), Gaps = 35/277 (12%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG VI+ I++ + + A + L+V L QE + G Sbjct: 14 AISVNGVVISREAIAQEVQNHPA-DKPIHAWQAAARALVVRELLLQEAARLG-------- 64 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM-LKYGNLEM 161 ++ + + D ++ A ++ +V+ + + Sbjct: 65 ---------------------IETEALCDPDGRRETAEEAAMRALVEREVKTPEPDEAAC 103 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLE 220 + + Y +L + P + + ++ + + Sbjct: 104 RRFYEQNIQRFRLGDLYEAAHILIAAPRDNQAARVAAREQAETILAAVKENPAVFADMAS 163 Query: 221 KFAS-KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 ++ G+ + +F+ L++ Q T+ G + + + + Sbjct: 164 NHSACSTSAAEGGRLGQISRGQTVAEFEAALERMQPGEMAIAETRYGFHVVRLDRRAEGQ 223 Query: 280 --GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K ++ + + A+Y+ L A I Sbjct: 224 TLPFELAKERIAGYLATSVEHRALAQYISILAGQAEI 260 >gi|307571805|emb|CAR84984.1| protein export peptidyl-prolyl isomerase protein [Listeria monocytogenes L99] Length = 279 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 28/290 (9%), Positives = 78/290 (26%), Gaps = 40/290 (13%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + S + + T + +T ++ + + VQ+L E + + Sbjct: 1 MFSLAACGGGGDVVKT-DSGDVTKDELYDAMK--------DKYGSEFVQQLTFEKILGDK 51 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 + S D + + ++ Q + +V+ Sbjct: 52 YKVSDEDVD------------KKFNEYKSQYGDQFSAVLAQSGLTEKSFKSQLKYNLLVQ 99 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + + + + + K+ E+ Sbjct: 100 KATEANTDTSDKVLKKYYET---------------WQPDITVSHILVADENKAKEVEQKL 144 Query: 210 LRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKG 266 K + +++++ + G+ + P F+ K++ + + P TQ G Sbjct: 145 KDGAKFADLAKEYSTDTATKENGGQLAPFGPGKMDPAFEKAAYALKNKGDISAPVKTQYG 204 Query: 267 VEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKKLRSNAIIH 315 I + K + A ++ + +KK +A + Sbjct: 205 YHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKKEYKDANVK 254 >gi|301021433|ref|ZP_07185457.1| PPIC-type PPIASE domain protein [Escherichia coli MS 69-1] gi|300398069|gb|EFJ81607.1| PPIC-type PPIASE domain protein [Escherichia coli MS 69-1] Length = 93 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 21/78 (26%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K + + +K + G + + P F + + Sbjct: 13 KEEKLALELLDQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 T P TQ G I + Sbjct: 73 EPTGPLHTQFGYHIIKVL 90 >gi|15616760|ref|NP_239972.1| survival protein SurA precursor [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11387168|sp|P57240|SURA_BUCAI RecName: Full=Chaperone surA homolog; Flags: Precursor gi|25403557|pir||B84946 peptidylprolyl isomerase (EC 5.2.1.8) surA [imported] - Buchnera sp. (strain APS) gi|10038823|dbj|BAB12858.1| survival protein surA precursor [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 430 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 46/157 (29%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + N K + P L N +K E + + + ++ Sbjct: 271 LKVNDIHHKKENIVTEFYMQHCLIKPSVILTNTEAKKKIFNIYENIKKGIYTFDDAVKNL 330 Query: 223 ASKI-HDVSIGKAQYLLESDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + G ++ + L + L +N + P + G I D+R + Sbjct: 331 SDDYYSSNKKGDLGWISKESLGFDLNKKFLILDKNEISEPVKSNWGWHIFKILDRRQVDA 390 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K KI + +++ L++ A I Sbjct: 391 FYKLKKNQAFNIVLNQKIISEKNHWIEDLKNTAYIEI 427 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 92/299 (30%), Gaps = 18/299 (6%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETL 85 I +N E+I + D+++ + LK K L++ +++LIV++L Sbjct: 19 LAKNNQVDNITAIVNDEIILNSDVNEILVFLKKSKKKFIIPLKSDFLKEKVLEKLIVDSL 78 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF----LDKQGIGDNHFKQYLAIQ 141 QE I ++ A +S + F K ++F + + I Sbjct: 79 ILQEANSKNINITKEQIDTVIKNIALKKHISVDHFKKQILLRNIKNPSYYDNFIKKIEIL 138 Query: 142 SIWPDVVKNDFMLKYGNLEME---IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + + E E I K + L +L S+ + Sbjct: 139 LKMKTIQDYELHKRINISEQEVNTIFKKLIKDNEKFKKINLSYILLPSLKQDSDNAVRNR 198 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNT 257 K ++ + L + + K + D+ + F+ L + Sbjct: 199 TKIAENIVYKLKKGYDFEKLLIECEKNKSTFIVKKMFWKPLLDIQNSFFKTLNIFKKGQI 258 Query: 258 TNPYVTQKGVEYIAICD---KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 P V KG+ + + D K++ + + + + + + N Sbjct: 259 LGPIVGDKGLYILKVNDIHHKKENIVTEFYMQHCLIKPSVILTNTEAKKKIFNIYENIK 317 >gi|332531965|ref|ZP_08407849.1| peptidyl-prolyl cis-trans isomerase PpiC [Pseudoalteromonas haloplanktis ANT/505] gi|332038592|gb|EGI75035.1| peptidyl-prolyl cis-trans isomerase PpiC [Pseudoalteromonas haloplanktis ANT/505] Length = 93 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 24/80 (30%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 + + D + + + ++ G + P+F + + N Sbjct: 14 EAQCLDLKTKIEQGEDFAELAKAHSNCPSGQDGGALGEFGPGMMVPEFDKVVFSAPINQV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + + + + Sbjct: 74 QGPVQTQFGYHLLEVTSRSE 93 >gi|229590103|ref|YP_002872222.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens SBW25] gi|229361969|emb|CAY48869.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens SBW25] Length = 93 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 24/81 (29%), Gaps = 1/81 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256 + + + + + +S G + +F ++ + N Sbjct: 13 TEDKCNELKAQIEGGADFAEIAKANSSCPSSRDGGNLGSFGPGQMVKEFDTVVFSAPVNT 72 Query: 257 TTNPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 73 VQGPVKTQFGYHLLEVTSRQD 93 >gi|77361403|ref|YP_340978.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Pseudoalteromonas haloplanktis TAC125] gi|76876314|emb|CAI87536.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Pseudoalteromonas haloplanktis TAC125] Length = 93 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 25/80 (31%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 + + D +E + + ++ G + P+F + + N Sbjct: 14 EAQCLDLKEKIEQGEDFAVLAKAHSNCPSGQDGGALGEFGPGMMVPEFDKVVFSAPINQV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + + + + Sbjct: 74 QGPVQTQFGYHLLEVTSRSE 93 >gi|152996616|ref|YP_001341451.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinomonas sp. MWYL1] gi|150837540|gb|ABR71516.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinomonas sp. MWYL1] Length = 92 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 20/67 (29%), Gaps = 1/67 (1%) Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKG 266 + ++F++ G + D+ P F + + P TQ G Sbjct: 23 KLDKGADFHKLAKQFSTCPSGKKGGDLGEFRKGDMVPAFDKAVFGGPLYKIQGPVKTQFG 82 Query: 267 VEYIAIC 273 I + Sbjct: 83 FHLIKVL 89 >gi|58698918|ref|ZP_00373781.1| peptidyl-prolyl cis-trans isomerse D, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|58534569|gb|EAL58705.1| peptidyl-prolyl cis-trans isomerse D, putative [Wolbachia endosymbiont of Drosophila ananassae] Length = 578 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 31/377 (8%), Positives = 84/377 (22%), Gaps = 77/377 (20%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ- 66 ++ +F +T + + V + + S + EVIT + Q Sbjct: 2 NVKNFFTKVTVVLLACLLIFVGVGNLLSGDDEKEEVARVGKEVITSDEYKSLYQNYGKQI 61 Query: 67 -------KINGELEKIAVQELIVETLKKQ-----------------------------EI 90 + +L+ + LI + L E Sbjct: 62 SGSDASREQVKKLKYDLLNALIEQKLLFNLTSELGLTVGEESIKNHIKNTKYFQNDKGEF 121 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 +K+ N ++ ++ + I+ + Sbjct: 122 DKNKFHETLNDLHMTEKEYIAKLEKILPAMMFMTSLFKDNYPVTFGEKIDEQIYNSRYQT 181 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD------ 204 + E + + + Y F P+ + ++++ + Sbjct: 182 RVVDIVKITEDAVTNIPEPDDQTLLDLYERNKSHFYYPEYRTAQYISLEQKYFEDQIKIS 241 Query: 205 ---------AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--------- 246 +E R + + + +F Sbjct: 242 DEEVDGIIEQQELRDQRDIFNIIFSTKEEAETARRAFEEGKTSFEQIVEEFGKAELEETR 301 Query: 247 --------------QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSA 290 + + + + G I + + E LK + + Sbjct: 302 VNNITKDFLPEDMREKVFALKVGEVSEVLASSFGWHIIKVESAHQISDEDLVDLKKDIKS 361 Query: 291 QNTPTKIEKHEAEYVKK 307 T K + +++ + Sbjct: 362 VLTNQKSFERVNDFINQ 378 >gi|15606786|ref|NP_214166.1| hypothetical protein aq_1695 [Aquifex aeolicus VF5] gi|2984018|gb|AAC07562.1| putative protein [Aquifex aeolicus VF5] Length = 296 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 89/309 (28%), Gaps = 50/309 (16%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-------KRIALLKLQKI 68 + ++I+F I I S +I ++G +T ++ KRI L K Sbjct: 1 MKKPILVILFFIGFIFS--------QIVAEVDGYKVTKEELDTLFHVFWKRITHLSSAKP 52 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 E ++I + + + + L +E +K GI +N F ++ Sbjct: 53 TQEDKRIFLIDYVADLLILKEAKKMGIEVSEKEINDFIRKYVGRKIKEKS---------- 102 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + +V + N +I + +L Sbjct: 103 -----VINAVKAEILVEKLVDKLMKEQELNPSEDILRAYYEFYKREFYRPSSVKLLGIY- 156 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 +K + + + + K + + + L + Sbjct: 157 -------VKSKKEAERISQILKQGEVPSTEDVKVSKPL---------WYSIPTLPKYIRR 200 Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYV 305 + S + P G I DK+ G K+ + K ++ +++ Sbjct: 201 NFRTLSVGEVSKPIKINDGYLVFKILDKKPAGFIPFERAKSLVKKMYLKEKRKEVFKKWL 260 Query: 306 KKLRSNAII 314 ++ + Sbjct: 261 SEVLKKYQV 269 >gi|295095199|emb|CBK84289.1| Parvulin-like peptidyl-prolyl isomerase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 93 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K +D E +K + G + + P F + + Sbjct: 13 KEEKLAQDLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 T P TQ G I + Sbjct: 73 EPTGPLHTQFGYHIIKVL 90 >gi|289626305|ref|ZP_06459259.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330867003|gb|EGH01712.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 96 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 21/74 (28%), Gaps = 1/74 (1%) Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVT 263 E + +S G + +F ++ + N P T Sbjct: 23 QIEGGADFADFAEIAKANSSCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPVNTVQGPVKT 82 Query: 264 QKGVEYIAICDKRD 277 Q G + + ++D Sbjct: 83 QFGYHLLEVTSRQD 96 >gi|114327489|ref|YP_744646.1| peptidyl-prolyl cis-trans isomerase [Granulibacter bethesdensis CGDNIH1] gi|114315663|gb|ABI61723.1| peptidyl-prolyl cis-trans isomerase [Granulibacter bethesdensis CGDNIH1] Length = 656 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 32/388 (8%), Positives = 90/388 (23%), Gaps = 85/388 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI--------T 52 M + SL+ + L +++ F + A T+NG I Sbjct: 14 MLATFRNSLNAWPVRLLFGLLVLAFVGWGFSDVWTQATGGGALVTVNGSRIEPQAFQATY 73 Query: 53 DGDISKRIALLK--LQKINGELE----KIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 ++++ + Q + ++ + A+Q+++ ET+ K G+T + Sbjct: 74 QRELNRVRQQMGGGRQDVPPDIRKMVAQQALQQMVTETVLDDLTRKMGLTTPDADIRQAT 133 Query: 107 VQHAR----NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND----------- 151 F + L+ G+ ++ + YL ++ Sbjct: 134 YAMPAFKNDQGQFDQARFQAVLNSVGLTEDSYVAYLRRTITERQLLDAIRAGASAPKILV 193 Query: 152 ----------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + ++ R + Sbjct: 194 APLFAWQKEQRSGDMIEVPVSAAPAPPQPTDKQLERYWANHPARYTAPEYRRIKAIVLTP 253 Query: 190 NKLQNQGFVQKR------------IKDAEESRLRLPKDCNKLEKFASKIHDVSIGK---- 233 + V ++ E+ + + ++ + A + Sbjct: 254 ETVAKAIEVPEKDLRAWYDANGIHFDTPEKRDVSIVLVPDEAKAKALAEQWDNGADWKKI 313 Query: 234 -------------AQYLLESDLH-PQFQN--LLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + L P + P G + + + Sbjct: 314 SALANSDGGSAVELTGITKQQLPVPDLMPLAFETTKTDQIAGPVHDSLGWHVVRVGKIQP 373 Query: 278 LG--GEIALKAYLSAQNTPTKIEKHEAE 303 +K + + + + + Sbjct: 374 ATHRSFEEMKEEIKQILSTQRAMEQIYD 401 Score = 45.1 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 32/263 (12%), Positives = 64/263 (24%), Gaps = 19/263 (7%) Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 E+++ Q L + +Q ++S ++ + A + Sbjct: 380 EEMKEEIKQILSTQRAMEQIYDRSSHLDEAFAQGSTLDDKLPDADAVAAISGQLDMQGNT 439 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI--PANKQKMKNITVREYLIRTVLFSI 187 + + ++ F +K G+ + Q Y V I Sbjct: 440 REGTPAPIPGSDQLKQALITAAFSMKKGDAPHLVPVTPQSQPGTPAGPTTYFAVQVEDII 499 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 P + D + + ++ + S+ A L L Sbjct: 500 PGALRPFPEVKAEVTADWIQDKRHHSQEEAATRAMLALQEGKSVADAVTLSGGTLKQIPL 559 Query: 248 NLLKKSQNNTTN---------------PYVTQKGVEYIAICDK--RDLGGEIALKAYLSA 290 K + + T G I + + A + Sbjct: 560 LTRKGETGDVSADTRRALFALKLNDSTMVNTPDGFAIIRLTRILSPTEKDDPAAFSQARE 619 Query: 291 QNTPTKIEKHEAEYVKKLRSNAI 313 Q T E E ++ LRS A Sbjct: 620 QITQGLAEDLENTFLASLRSKAD 642 >gi|297812121|ref|XP_002873944.1| hypothetical protein ARALYDRAFT_488823 [Arabidopsis lyrata subsp. lyrata] gi|297319781|gb|EFH50203.1| hypothetical protein ARALYDRAFT_488823 [Arabidopsis lyrata subsp. lyrata] Length = 296 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 11/87 (12%), Positives = 35/87 (40%) Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 + + ++ L + + +++ G ++ + P+F+ K++ N Sbjct: 106 ELFAELQKRILEGEEMSDLAAEYSICPSKKDGGILGWVKLGQMVPEFEEAAFKAEPNQVV 165 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKA 286 TQ G+ + + +R+ +I ++ Sbjct: 166 RCRTQFGLHLLQVLSEREPVKDIQVEE 192 >gi|90416509|ref|ZP_01224440.1| peptidyl-prolyl cis-trans isomerase C2 [marine gamma proteobacterium HTCC2207] gi|90331708|gb|EAS46936.1| peptidyl-prolyl cis-trans isomerase C2 [marine gamma proteobacterium HTCC2207] Length = 93 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 23/79 (29%), Gaps = 1/79 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +++ D ++ N + +S G + +F + + Sbjct: 14 EEKCADLKQQIEAGADFANVASEHSSCPSGSRGGDLGQFGPGQMVREFDEVVFSGELGMV 73 Query: 258 TNPYVTQKGVEYIAICDKR 276 P TQ G + I + Sbjct: 74 HGPVQTQFGYHLLEITSRE 92 >gi|291277475|ref|YP_003517247.1| hypothetical protein HMU12700 [Helicobacter mustelae 12198] gi|290964669|emb|CBG40524.1| putative periplasmic protein [Helicobacter mustelae 12198] Length = 300 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 85/273 (31%), Gaps = 23/273 (8%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 I T+NG+ IT I + KL E+ A+ L+ + +K+QEI++ I D Sbjct: 46 IAITVNGDPITLYQIKQTAKEQKL------TEEKAIDFLVAQKIKEQEIKRLKINIDEEK 99 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 ++ A G+ + F S + K+ + + + + ++ GN Sbjct: 100 IDNEIQNMAYRNGMDTKTFLSAIKKEQHMSEREFKKHLKEQMETQELMRSVLMSNGNSAG 159 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 E K+ ++ + K A R+ + + Sbjct: 160 EEEMRDYYNKHRGEFNMPKEVLVVRYSAKSSELLEEAIKHPDTAMRGVERVQEKMSLASL 219 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + + +F +L N I + Sbjct: 220 APQ---------IGQVFATTKINEFTTILNAGNNTFVT--------FLIKEKIGEEQITF 262 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K +++ + + +K ++ +K++ A I Sbjct: 263 QQAKNFITQKLIEKRQDKILEDHFEKIKQKASI 295 >gi|193213470|ref|YP_001999423.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobaculum parvum NCIB 8327] gi|193086947|gb|ACF12223.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobaculum parvum NCIB 8327] Length = 701 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 14/116 (12%), Positives = 33/116 (28%), Gaps = 4/116 (3%) Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGK 233 +L + + Q + + K++ + G Sbjct: 344 EPMASASHILIRVNPADKASVESGQALARKILDELKNGASFAQLAAKYSQDPGNAQRGGF 403 Query: 234 AQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAIC--DKRDLGGEIALKA 286 + + + P+F Q + P +T+ G+ I I D R + ++ Sbjct: 404 LGWFTKERMVPEFTQAVFSGKPGQVVGPVLTRFGLHIIKIDGFDNRQIVCSEVVRQ 459 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 28/98 (28%), Gaps = 5/98 (5%) Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL- 278 + + I Y + L + N + P T G + + ++ Sbjct: 604 KITSGIISWRDGNIDGYGSDRRLVEAMAGM---ELNKLSAPVQTSNGFALVKLDGRQLPY 660 Query: 279 -GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + Q K E+ EY + R A I Sbjct: 661 GLDLEVEKKRILPQLMKIKQEQLFNEYFEAARRTAKIE 698 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 23/246 (9%), Positives = 67/246 (27%), Gaps = 24/246 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + K+ + +L FV +I + +NGE I + + Sbjct: 3 LMGKLRDKTHIVLFILVAAFVGLIVFEWGMNFTGPKQSRGGDVGAVNGEPIPAAEYEQLY 62 Query: 61 ALLKLQKINGE------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF--- 105 ++ L + A ++ +TL Q ++K + V Sbjct: 63 NMVSTSFRQRNPGVEVTSRIDAGLREQAWNMVVDQTLINQLLKKYAVQVSDQEVLEAVNS 122 Query: 106 -------FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 Q+ + D + A + + +++ N ++ + Sbjct: 123 EVNPPGIIRQNFTDPKTGQIDRELLEKARQDPQAKEFWLKAQEMVRRELMINKLLMDLKS 182 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ--GFVQKRIKDAEESRLRLPKDC 216 + + ++ + + F + ++ E + + ++ Sbjct: 183 MAIVTDPEVTELVQRQYTTFSGSFIPFPYDFAGPASNFPVKDEEITAWYEAHKGQFQQEP 242 Query: 217 NKLEKF 222 + +F Sbjct: 243 TRSAEF 248 >gi|219681515|ref|YP_002467900.1| survival protein SurA precursor [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471196|ref|ZP_05635195.1| survival protein SurA precursor [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219624358|gb|ACL30513.1| survival protein SurA precursor [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 430 Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 46/157 (29%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + N K + P L N +K E + + + ++ Sbjct: 271 LKVNDIHHKKENIVTEFYMQHCLIKPSVILTNTEAKKKIFNIYENIKKGIYTFDDAVKNL 330 Query: 223 ASKI-HDVSIGKAQYLLESDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + G ++ + L + L +N + P + G I D+R + Sbjct: 331 SDDYYSSNKKGDLGWISKESLGFDLNKKFLILDKNEISEPVKSNWGWHIFKILDRRQVDA 390 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K KI + +++ L++ A I Sbjct: 391 FYKLKKNQAFNIVLNQKIISEKNHWIEDLKNTAYIEI 427 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 88/299 (29%), Gaps = 18/299 (6%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETL 85 I +N E+I + D+++ + LK K L++ +++LIV++L Sbjct: 19 LAKNNQVDNITAIVNDEIILNSDVNEILVFLKKSKKKFIIPLKSDFLKEKVLEKLIVDSL 78 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNT----GLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 QE I ++ A + K ++F + + I Sbjct: 79 ILQEANSKNINITKEQIDTVIKNIALKKHISVNHFKKQILLRNIKNPSYYDNFIKKIEIL 138 Query: 142 SIWPDVVKNDFMLKYGNLEME---IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + + E E I K + L +L S + Sbjct: 139 LKMKTIQDYELHKRINISEQEVNTIFKKLIKDNEKFKKINLSYILLPSFKQDSDNAVRNR 198 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNT 257 K ++ + L + + K + D+ + F+ L + Sbjct: 199 TKIAENIVYKLKKGYDFEKLLIECEKNKSTFIVKKMFWKPLLDIQNSFFKTLNIFKKGQI 258 Query: 258 TNPYVTQKGVEYIAICD---KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 P V KG+ + + D K++ + + + + + + N Sbjct: 259 LGPIVGDKGLYILKVNDIHHKKENIVTEFYMQHCLIKPSVILTNTEAKKKIFNIYENIK 317 >gi|303236785|ref|ZP_07323364.1| PPIC-type PPIASE domain protein [Prevotella disiens FB035-09AN] gi|302482953|gb|EFL45969.1| PPIC-type PPIASE domain protein [Prevotella disiens FB035-09AN] Length = 407 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 18/164 (10%), Positives = 43/164 (26%), Gaps = 4/164 (2%) Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL-QNQGFVQKRIKDAEESRLR 211 +I + + +L S Q + R ++ Sbjct: 36 DADIEAEAQKIYKETRDRIEGSGGLIRCAHILLSAGQKASVAEQKEIADRADSLYNVIMK 95 Query: 212 LPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269 +K++ G+ + F+ ++P ++ G Sbjct: 96 GGNFAELAKKYSKDPSSAARGGELPLITRGQTVQAFEEALFSMKPGEISHPILSPFGYHI 155 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNA 312 I K +LKA + E+ + ++K+ + A Sbjct: 156 IKYVAKEQFQPYDSLKADIHQFIEARNLREQIIDQKLQKMATEA 199 >gi|298370084|ref|ZP_06981400.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] gi|298281544|gb|EFI23033.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] Length = 290 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 30/298 (10%), Positives = 79/298 (26%), Gaps = 23/298 (7%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET 84 +++ S +S++ T+NG I I ++ +++ Q + + L Sbjct: 6 IISALVLAALSGTLSAKTLVTVNGTAIDSSTIDDQVKVIRSQNKQVQDSPALRKSLTERQ 65 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 + + + + F ++ + + + F++ Sbjct: 66 IIATVVSQEAKRLKLDQSAEFKKAAEQSRTAATKQGADKKPTFKTEWAVFEKD------- 118 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 ++ F + + + N + Y + N+ + Sbjct: 119 --LLGQAFAMHIAKQNPVQEKDIKTAYNDFSKFYKGTQEVQLGQIAARSNEDAQKA---- 172 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKA--QYLLESDL----HPQFQNLLKKSQNNT- 257 + N L++++ G Y+ DL P + + + Sbjct: 173 -IKDLEAKKSFANVLKQYSVDEQAKKAGGIARGYVPLKDLEQSAPPLYAAIKDLKKGGFT 231 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P I D+RD+ + + + L A I Sbjct: 232 SAPLPNGNVYSVFYINDRRDIKV--PSYEEMKNEIGSELQASRIDAAIGALMQKADIK 287 >gi|303239171|ref|ZP_07325700.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acetivibrio cellulolyticus CD2] gi|302593216|gb|EFL62935.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acetivibrio cellulolyticus CD2] Length = 353 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 30/339 (8%), Positives = 90/339 (26%), Gaps = 46/339 (13%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS-----RIRTTINGEVITDGDISKRIALLKLQK 67 +K + T+ + KS +S+ I T+ E IT + + QK Sbjct: 3 LKKVITFALSASLVFSLSACNKSVKLSNGKNSTDIVGTVGDEKITATEFKFYATMEINQK 62 Query: 68 --------------------------INGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 + + L + +K + + Sbjct: 63 ESQAGIADKSKDEKKKYWETKEGDVDRKQTVIDNTLNNLTELKVLLMSAKKDNVKLEQTD 122 Query: 102 VNYFFVQHARN-----TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 + + G E ++K G+ + +K + + + K Sbjct: 123 FDDANKMIDQFVQNEAKGDKNEAEKVMMEKYGVSIDQYKLMYQDYMLAYNKYASSQPAKI 182 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ-----NQGFVQKRIKDAEESRLR 211 + ++ + +K K + + ++ + + +K D + Sbjct: 183 EINDSDVKSEFEKNKEQYNKVTVKHVLVLTNDSTTNEPLPEDKVAEKKKLADDILKKAQA 242 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIA 271 +++++ G + ++ +F++ ++ T G + Sbjct: 243 GEDFEALVKQYSEDPGSKDKGGEYTFPKGEMVKEFEDWAFNAKEGDMGVVQTTYGFHVMK 302 Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + D + + + + + +L+ Sbjct: 303 FIKREDASFDAE-----KDKLKSSLQNAQYQKKLDELKK 336 >gi|255639033|gb|ACU19817.1| unknown [Glycine max] Length = 291 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 10/100 (10%), Positives = 32/100 (32%), Gaps = 1/100 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 QK + ++ + +++ G ++ + + P+F+ + Sbjct: 95 EDDQKLLLYLQQKISSGEDLSDLAVEYSLCPSKEEGGMLGWVRKGQMVPEFEEAAFTAPL 154 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSAQNTP 294 N T+ G + + +R+ ++ L + Sbjct: 155 NQVVRCKTKFGWHLLQVLSEREESILQDIQPDELHMKIQD 194 >gi|324007449|gb|EGB76668.1| PPIC-type PPIASE domain protein [Escherichia coli MS 57-2] Length = 117 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 21/78 (26%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + Sbjct: 37 KEEKLALDLLEQIKNGADFSKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVL 96 Query: 256 NTTNPYVTQKGVEYIAIC 273 T P TQ G I + Sbjct: 97 EPTGPLHTQFGYHIIKVL 114 >gi|294669107|ref|ZP_06734191.1| peptidyl-prolyl cis-trans isomerase D [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308921|gb|EFE50164.1| peptidyl-prolyl cis-trans isomerase D [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 566 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 29/253 (11%), Positives = 75/253 (29%), Gaps = 3/253 (1%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 + I L+ Q + +A IV + + + I + ++ Sbjct: 127 DQLIEKLRHQFELQNVANLAANGNIVSSQQLERIARLMQAEREIRTAVVDPRNFAAGVKV 186 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + + + + + I ++ + E E+ + ++ Sbjct: 187 DDAALKAYYDKDKSKYLIPKAVKFEYI--ELSAKTLADRQTVSEEEVKKAFAEQQSSAQP 244 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + + ++F++P + + + AE + S G Sbjct: 245 KQEVSHIMFALPQGGDKAKIKAEAEKVLAEAKASPDNFAALAQKYSQDAATAQSGGALGV 304 Query: 237 LLESD-LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 + +S L +F+ + K + G + I + + KA L A+ Sbjct: 305 VDKSSALPEEFKAAIAKLNKGDIALVESTAGFHIVRITNTQGQQSFDEAKASLEAELKQK 364 Query: 296 KIEKHEAEYVKKL 308 K ++ A+ + L Sbjct: 365 KAQQALAQMRQTL 377 >gi|294141729|ref|YP_003557707.1| peptidyl-prolyl cis-trans isomerase C [Shewanella violacea DSS12] gi|293328198|dbj|BAJ02929.1| peptidyl-prolyl cis-trans isomerase C [Shewanella violacea DSS12] Length = 92 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 25/78 (32%), Gaps = 1/78 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +++ + ++ L + + +S G + +F + + N Sbjct: 14 EEKCEALKQEILGGADFGDVAKANSSCPSSAQGGDLGSFGPGMMVKEFDEVVFNAPLNEV 73 Query: 258 TNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 74 QGPVKTQFGYHLLEVTSR 91 >gi|323332847|gb|EGA74250.1| Ess1p [Saccharomyces cerevisiae AWRI796] Length = 190 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 16/193 (8%), Positives = 46/193 (23%), Gaps = 12/193 (6%) Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 LI + + + + D + S + F + + Sbjct: 6 LIPTHNRLRHHNDAPMPSDVASSTGLPTPWTVRYSKSKKREYFFNPETKHSQWEEPEGTN 65 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + D ++ L + I + Q+ Sbjct: 66 KDQLHKHL--KDHPVRVRCLHILIKH---------KGSRRPASHRSENITISKQDATDEL 114 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT 258 K + + + ++ + G + ++ P F++ + + Sbjct: 115 KTLITRLDDDSKTNSFEALAKERSDCSSYKRGGDLGWFGRGEMQPSFEDAAFQLKVGEVS 174 Query: 259 NPYVTQKGVEYIA 271 + + GV I Sbjct: 175 DIVESGSGVHVIK 187 >gi|47092734|ref|ZP_00230520.1| protein export protein [Listeria monocytogenes str. 4b H7858] gi|47018922|gb|EAL09669.1| protein export protein [Listeria monocytogenes str. 4b H7858] Length = 287 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 27/305 (8%), Positives = 83/305 (27%), Gaps = 47/305 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + + S + +T ++ + + Sbjct: 1 MISVIAATLLLLAGCGSSA--------VVKTDAGSVTQDELYEAMKT--------TYGNE 44 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 VQ+L + + + + + ++ E + + +N K Sbjct: 45 VVQQLTFKKILEDKYTVTEKEVNAEY------------KKYEEQYGDSFESTLSSNNLTK 92 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + +V+ E ++ + + +R +L Sbjct: 93 TSFKENLEYNLLVQKATEANMNVSESKLKTYYKTW----EPDITVRHIL----------- 137 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--K 252 + K+ + K + +++++ + G ++ F+ + Sbjct: 138 VDDEATAKEIQTKLKNGEKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALE 197 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-AQNTPTKIEKHEAEYVKKLRSN 311 ++++ + + G I + K + G KA + A ++ +KK Sbjct: 198 NKDDVSGIVKSTYGYHLIQLVKKTEKGTYAKEKANVKAAYIESQLTTENMIAALKKELKA 257 Query: 312 AIIHY 316 A I Sbjct: 258 ANIDI 262 >gi|126443707|ref|YP_001062622.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Burkholderia pseudomallei 668] gi|126223198|gb|ABN86703.1| PPIC-type PPIASE domain protein [Burkholderia pseudomallei 668] Length = 265 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 22/180 (12%), Positives = 46/180 (25%), Gaps = 4/180 (2%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 ++ + + L + R+ + + + + + Sbjct: 73 DDALDALLARELTPLPEPTRDACERYYLNHAARFRRRDIVYASHILFAVTDATPLAPLRR 132 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNT 257 + + + ++ G LL D P+F Sbjct: 133 EAEATLARVLAEPQTFEARARELSNCPSAQVGGSLGQLLRGDSVPEFDAAVFDTTDSGVL 192 Query: 258 TNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T+ G + I + D A+ A ++A K +YV L S A I Sbjct: 193 PRLVNTRFGFHIVRIERRVPGDPVPFDAVAAEIAAFLAERVHHKAIQQYVTILASGARIE 252 >gi|331006497|ref|ZP_08329797.1| Peptidyl-prolyl cis-trans isomerase ppiC [gamma proteobacterium IMCC1989] gi|330419697|gb|EGG94063.1| Peptidyl-prolyl cis-trans isomerase ppiC [gamma proteobacterium IMCC1989] Length = 93 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 10/82 (12%), Positives = 30/82 (36%), Gaps = 1/82 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +++ ++ + ++ +S G+ + + P+F + + ++ N Sbjct: 12 DTEEQCNKLKQDIEGGIAFTDIAKQHSSCPSGAQGGELGEFTQGQMVPEFDKVVFNEALN 71 Query: 256 NTTNPYVTQKGVEYIAICDKRD 277 P TQ G + I + + Sbjct: 72 TVHGPVKTQFGYHLLEITARSE 93 >gi|225010080|ref|ZP_03700552.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteria bacterium MS024-3C] gi|225005559|gb|EEG43509.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteria bacterium MS024-3C] Length = 706 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 29/85 (34%) Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 + ++ + E++ + G + E + P+F + + + Sbjct: 374 KEEARKEANRLLIEAKKSTTVFAELARDNSDGPTASRGGDLGFFQEGQMTPKFNDFVFSN 433 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL 278 + T+ G + + DK+D+ Sbjct: 434 SVDAIGLVETEFGFHIVRVDDKQDI 458 Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 46/163 (28%), Gaps = 13/163 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 K+ + I ++ + V S M ++NGE I+ D +++ Sbjct: 4 LEKIRQRTTVLILIIGLALFAFVISGVFTNSGSGSPMGGSAIGSVNGEEISIDDFRQKLE 63 Query: 62 -------------LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 L Q N L + + I + E ++ + + Sbjct: 64 VAAQRAGSQATTVQLVNQVWNSSLRTSLLNQEIEDLGISVEGDQIMNFIKNTPSYSNQPE 123 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 G+ +E +N ++ L +Q + Sbjct: 124 FQDENGIFSESLFIAAVADWKANNPYRYSLWLQDELAIMQSAK 166 >gi|226506196|ref|NP_001152416.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Zea mays] gi|195656053|gb|ACG47494.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Zea mays] Length = 151 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 10/103 (9%), Positives = 30/103 (29%), Gaps = 3/103 (2%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 + VL + +Q + + + ++++ G Sbjct: 50 TYVKAKHVLCEKQGKINEAYKKLQDGWLNNGDKVP-PAEFAKVAQEYSECPSGKKGGDLG 108 Query: 236 YLLESDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + P + + + P+ + G +I +C+ R Sbjct: 109 WFPRGKMAGPFQEVAFNTPEGTVSAPFKSTHGYHFI-LCEVRK 150 >gi|95930624|ref|ZP_01313358.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfuromonas acetoxidans DSM 684] gi|95133276|gb|EAT14941.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfuromonas acetoxidans DSM 684] Length = 93 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 18/70 (25%), Gaps = 1/70 (1%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQK 265 + +KF+ G + +F + + P TQ Sbjct: 23 QIEAGATDFAECAQKFSQCPSGRKGGDLGQFAPGQMVKEFDEVVFSGEVGKVLGPVKTQF 82 Query: 266 GVEYIAICDK 275 G I + + Sbjct: 83 GYHLIEVTKR 92 >gi|296105332|ref|YP_003615478.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059791|gb|ADF64529.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 93 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 23/81 (28%), Gaps = 1/81 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + Sbjct: 13 KEEKLALDLLEQLKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVL 72 Query: 256 NTTNPYVTQKGVEYIAICDKR 276 T P TQ G I + ++ Sbjct: 73 EPTGPLHTQFGYHVIKVLYRK 93 >gi|188993651|ref|YP_001905661.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. campestris str. B100] gi|167735411|emb|CAP53626.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. campestris] Length = 294 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 18/199 (9%), Positives = 48/199 (24%), Gaps = 12/199 (6%) Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 D + Q + A +I ++ ++ A + Sbjct: 85 DQAHQERLQDDPVVAARIRQATDAILVKAMQTRVRQAAQIDAAQVQAQFDAHPHDYDEVQ 144 Query: 179 LIRTVLFSIPDNK-----LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIG 232 L + P + ++ R + ++ + + G Sbjct: 145 LSHVFVALHPQSDARGGTELSELQAAARAQQLKQQLDAGTPFAELARRDSDDASTASDGG 204 Query: 233 KAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 + + ++ F ++ + P G I + D R + + Q Sbjct: 205 QLSSIFLRNVADVFAASVQALGVGQVSAPVRGPDGYHLIRL-DARTPATFDTARGQIEVQ 263 Query: 292 NTPTKIEKHEAEYVKKLRS 310 +++LR Sbjct: 264 LRAQAETAA----LEQLRQ 278 >gi|323934167|gb|EGB30598.1| ppic-type ppiase domain-containing protein [Escherichia coli E1520] Length = 108 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 26/100 (26%), Gaps = 1/100 (1%) Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 Y ++ + L +K D E +K + G Sbjct: 6 PDNYSLKARSWQKTAAALHILVKEEKLALDLLEQIKNGADFGKLAKKHSICPSGKRGGDL 65 Query: 235 QYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAIC 273 + + P F + + T P TQ G I + Sbjct: 66 GEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFGYHIIKVL 105 >gi|306815185|ref|ZP_07449338.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli NC101] gi|305851554|gb|EFM52008.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli NC101] Length = 93 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 21/78 (26%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + Sbjct: 13 KEEKLALDLLEQIKNGADFSKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 T P TQ G I + Sbjct: 73 EPTGPLHTQFGYHIIKVL 90 >gi|237750606|ref|ZP_04581086.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] gi|229373696|gb|EEO24087.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] Length = 294 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 106/316 (33%), Gaps = 42/316 (13%) Query: 15 LLTTYFVLIIFCIVPI-------------VSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 ++ F+ + C + S + I +NGE IT I + Sbjct: 1 MIKKIFIFTLLCCSTFIYAESSSQSPASSLDSVSKNIVGGIALFVNGEPITLHAIKQVEN 60 Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 L A L+ E LK+ EI++ I + ++ Q A+ G++ + F Sbjct: 61 ALHTD------RLRATDILVTEKLKEAEIKRLKIEINDIQLDSQIAQIAQQNGMNLDQFY 114 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 + + ++G+ ++ L Q + ++++ E E+ + + + + Sbjct: 115 AAIMREGMSLVEYRTKLKEQMLAQELMRKILFSSNVGQEDELRKYYNEHLDEF---VIPK 171 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 V+ ++ + + + KLE + L + Sbjct: 172 EVVGVKFVSRNKEILESFMQQGIDSTIPDSIAHTEEKLEIES--------------LPTQ 217 Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKG-VEYIAICDK--RDLGGEIALKAYLSAQNTPTKIE 298 + F L + + T + + G I K + K Y++ + E Sbjct: 218 VADIF---LATNAKSFTQVFESDNGDFVAFYIKGKISNEQVDFEKAKNYIAQKLIANNQE 274 Query: 299 KHEAEYVKKLRSNAII 314 K ++Y +++RS + I Sbjct: 275 KILSDYFERVRSRSKI 290 >gi|219682071|ref|YP_002468455.1| survival protein SurA precursor [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219621804|gb|ACL29960.1| survival protein SurA precursor [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311085883|gb|ADP65965.1| survival protein SurA precursor [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311087036|gb|ADP67116.1| survival protein SurA precursor [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087600|gb|ADP67679.1| survival protein SurA precursor [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 430 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 46/157 (29%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + N K + P L N +K E + + + ++ Sbjct: 271 LKVNDIHHKKENIVTEFYMQHCLIKPSVILTNTEAKKKIFNIYENIKKGIYTFDDAVKNL 330 Query: 223 ASKI-HDVSIGKAQYLLESDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + G ++ + L + L +N + P + G I D+R + Sbjct: 331 SDDYYSSNKKGDLGWISKESLGFDLNKKFLILDKNEISEPVKSNWGWHIFKILDRRQVDA 390 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K KI + +++ L++ A I Sbjct: 391 FYKLKKNQAFNIVLNQKIISEKNHWIEDLKNTAYIEI 427 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 88/299 (29%), Gaps = 18/299 (6%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETL 85 I +N E+I + D+++ + LK K L++ +++LIV++L Sbjct: 19 LAKNNQVDNITAIVNDEIILNSDVNEILVFLKKSKKKFIIPLKSDFLKEKVLEKLIVDSL 78 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNT----GLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 QE I ++ A + K ++F + + I Sbjct: 79 ILQEANSKNINITKEQIDTVIKNIALKKHISVNHFKKQILLRNIKNPSYYDNFIKKIEIL 138 Query: 142 SIWPDVVKNDFMLKYGNLEME---IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + + E E I K + L +L S + Sbjct: 139 LKMKTIQDYELHKRINISEQEVNTIFKKLIKDNEKFKKINLSYILLPSFKQDSDNAVRNR 198 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNT 257 K ++ + L + + K + D+ + F+ L + Sbjct: 199 IKIAENIVYKLKKGYDFEKLLIECEKNKSTFIVKKMFWKPLLDIQNSFFKTLNIFKKGQI 258 Query: 258 TNPYVTQKGVEYIAICD---KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 P V KG+ + + D K++ + + + + + + N Sbjct: 259 LGPIVGDKGLYILKVNDIHHKKENIVTEFYMQHCLIKPSVILTNTEAKKKIFNIYENIK 317 >gi|261749107|ref|YP_003256792.1| putative exported peptidyl-prolyl cis-trans isomerase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497199|gb|ACX83649.1| putative exported peptidyl-prolyl cis-trans isomerase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 421 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 96/305 (31%), Gaps = 27/305 (8%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKRIALLKLQK 67 + F KL F +++ I+ + + S+ + I E++ D ++ + K Sbjct: 3 NIFFKLKQECFFILLMLIIFCIPFPSFTFEKIGGMTAVIGDEILLDSEVKHYLNSNKKIT 62 Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 LE + + +LI+ KK + + F + N + + Sbjct: 63 PCKGLENLIIHKLILYHAKKDPSLQIDNQEIQSKKEEFLKEFNSNFSKNFSLEELTEKIK 122 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + ++ E++ NK+K K + + + + + Sbjct: 123 NNQYIEKFYQKMKE-----------DIEISPEEVKYFFNKEKEKLPIIPKKICVSYMILS 171 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF 246 P +++ + +K ++ K + G + + ++ +F Sbjct: 172 PKFSKEHREKIVNFLKKIKKEIHSDKDFSMKAILLSEDYSSAFKGGLINGVKKKNISKEF 231 Query: 247 QNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305 + ++ + + P+ T G + + KR + + K + Sbjct: 232 ERIVFSLEEKQISEPFETDLGFHLVKLEKKRGEEID------IRHILIQPKYTE------ 279 Query: 306 KKLRS 310 ++LR Sbjct: 280 EELRK 284 >gi|332345756|gb|AEE59090.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli UMNK88] Length = 93 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 21/78 (26%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + Sbjct: 13 KEEKLALDLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 T P TQ G I + Sbjct: 73 EPTGPLHTQFGYHIIKVL 90 >gi|301047344|ref|ZP_07194429.1| PPIC-type PPIASE domain protein [Escherichia coli MS 185-1] gi|300300761|gb|EFJ57146.1| PPIC-type PPIASE domain protein [Escherichia coli MS 185-1] Length = 92 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 21/78 (26%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + Sbjct: 12 KEEKLALDLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVL 71 Query: 256 NTTNPYVTQKGVEYIAIC 273 T P TQ G I + Sbjct: 72 EPTGPLHTQFGYHIIKVL 89 >gi|237727901|ref|ZP_04558382.1| peptidyl-prolyl cis-trans isomerase C [Citrobacter sp. 30_2] gi|226910350|gb|EEH96268.1| peptidyl-prolyl cis-trans isomerase C [Citrobacter sp. 30_2] Length = 93 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 21/78 (26%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + Sbjct: 13 KEEKLALDLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 T P TQ G I + Sbjct: 73 EPTGPLHTQFGYHIIKVL 90 >gi|33357145|pdb|1JNS|A Chain A, Nmr Structure Of The E. Coli Peptidyl-Prolyl CisTRANS- Isomerase Parvulin 10 gi|33357146|pdb|1JNT|A Chain A, Nmr Structure Of The E. Coli Peptidyl-Prolyl CisTRANS- Isomerase Parvulin 10 Length = 92 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 21/78 (26%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + Sbjct: 12 KEEKLALDLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVL 71 Query: 256 NTTNPYVTQKGVEYIAIC 273 T P TQ G I + Sbjct: 72 EPTGPLHTQFGYHIIKVL 89 >gi|15804366|ref|NP_290406.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli O157:H7 EDL933] gi|15833963|ref|NP_312736.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. Sakai] gi|16131633|ref|NP_418223.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli str. K-12 substr. MG1655] gi|26250515|ref|NP_756555.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli CFT073] gi|74314289|ref|YP_312708.1| peptidyl-prolyl cis-trans isomerase C [Shigella sonnei Ss046] gi|82546130|ref|YP_410077.1| peptidyl-prolyl cis-trans isomerase C [Shigella boydii Sb227] gi|82779043|ref|YP_405392.1| peptidyl-prolyl cis-trans isomerase C [Shigella dysenteriae Sd197] gi|89110241|ref|AP_004021.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli str. K-12 substr. W3110] gi|91213297|ref|YP_543283.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli UTI89] gi|110644105|ref|YP_671835.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli 536] gi|117626038|ref|YP_859361.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli APEC O1] gi|157144407|ref|YP_001451724.1| hypothetical protein CKO_00116 [Citrobacter koseri ATCC BAA-895] gi|157159000|ref|YP_001465256.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli E24377A] gi|157163250|ref|YP_001460568.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli HS] gi|168751733|ref|ZP_02776755.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4113] gi|168753669|ref|ZP_02778676.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4401] gi|168764147|ref|ZP_02789154.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4501] gi|168768053|ref|ZP_02793060.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4486] gi|168775677|ref|ZP_02800684.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4196] gi|168780671|ref|ZP_02805678.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4076] gi|168786610|ref|ZP_02811617.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC869] gi|168800992|ref|ZP_02825999.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC508] gi|170022196|ref|YP_001727150.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli ATCC 8739] gi|170083264|ref|YP_001732584.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli str. K-12 substr. DH10B] gi|187731031|ref|YP_001882399.1| peptidyl-prolyl cis-trans isomerase C [Shigella boydii CDC 3083-94] gi|188492216|ref|ZP_02999486.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli 53638] gi|191166088|ref|ZP_03027923.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli B7A] gi|191174379|ref|ZP_03035884.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli F11] gi|193066141|ref|ZP_03047196.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli E22] gi|193071034|ref|ZP_03051961.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli E110019] gi|194429785|ref|ZP_03062300.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli B171] gi|194434610|ref|ZP_03066866.1| peptidyl-prolyl cis-trans isomerase C [Shigella dysenteriae 1012] gi|194438654|ref|ZP_03070742.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli 101-1] gi|195938064|ref|ZP_03083446.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli O157:H7 str. EC4024] gi|208808398|ref|ZP_03250735.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4206] gi|208813213|ref|ZP_03254542.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4045] gi|208819051|ref|ZP_03259371.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4042] gi|209400598|ref|YP_002273294.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4115] gi|215489105|ref|YP_002331536.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli O127:H6 str. E2348/69] gi|217325985|ref|ZP_03442069.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. TW14588] gi|218550998|ref|YP_002384789.1| peptidyl-prolyl cis-trans isomerase C [Escherichia fergusonii ATCC 35469] gi|218556338|ref|YP_002389252.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli IAI1] gi|218560842|ref|YP_002393755.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli S88] gi|218697493|ref|YP_002405160.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli 55989] gi|218707413|ref|YP_002414932.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli UMN026] gi|227888640|ref|ZP_04006445.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli 83972] gi|237702786|ref|ZP_04533267.1| peptidyl-prolyl cis-trans isomerase C [Escherichia sp. 3_2_53FAA] gi|238902858|ref|YP_002928654.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli BW2952] gi|253775598|ref|YP_003038429.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038988|ref|ZP_04873039.1| peptidyl-prolyl cis-trans isomerase C [Escherichia sp. 1_1_43] gi|254163720|ref|YP_003046828.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli B str. REL606] gi|254795774|ref|YP_003080611.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. TW14359] gi|256021482|ref|ZP_05435347.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Shigella sp. D9] gi|256026123|ref|ZP_05439988.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia sp. 4_1_40B] gi|260846448|ref|YP_003224226.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O103:H2 str. 12009] gi|260857818|ref|YP_003231709.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O26:H11 str. 11368] gi|260870501|ref|YP_003236903.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O111:H- str. 11128] gi|261225549|ref|ZP_05939830.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli O157:H7 str. FRIK2000] gi|261255596|ref|ZP_05948129.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. FRIK966] gi|283787544|ref|YP_003367409.1| peptidyl-prolyl cis-trans isomerase C [Citrobacter rodentium ICC168] gi|291285191|ref|YP_003502009.1| Peptidyl-prolyl cis-trans isomerase C [Escherichia coli O55:H7 str. CB9615] gi|293407407|ref|ZP_06651327.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli FVEC1412] gi|293413220|ref|ZP_06655882.1| peptidyl-prolyl cis-trans isomerase ppiC [Escherichia coli B354] gi|293417241|ref|ZP_06659866.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli B185] gi|293468094|ref|ZP_06664506.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli B088] gi|297519155|ref|ZP_06937541.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli OP50] gi|298383147|ref|ZP_06992741.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli FVEC1302] gi|300823307|ref|ZP_07103438.1| PPIC-type PPIASE domain protein [Escherichia coli MS 119-7] gi|300900680|ref|ZP_07118833.1| PPIC-type PPIASE domain protein [Escherichia coli MS 198-1] gi|300904026|ref|ZP_07121908.1| PPIC-type PPIASE domain protein [Escherichia coli MS 84-1] gi|300921519|ref|ZP_07137863.1| PPIC-type PPIASE domain protein [Escherichia coli MS 115-1] gi|300923275|ref|ZP_07139324.1| PPIC-type PPIASE domain protein [Escherichia coli MS 182-1] gi|300930062|ref|ZP_07145492.1| PPIC-type PPIASE domain protein [Escherichia coli MS 187-1] gi|300947369|ref|ZP_07161565.1| PPIC-type PPIASE domain protein [Escherichia coli MS 116-1] gi|300955223|ref|ZP_07167618.1| PPIC-type PPIASE domain protein [Escherichia coli MS 175-1] gi|300979304|ref|ZP_07174488.1| PPIC-type PPIASE domain protein [Escherichia coli MS 200-1] gi|301028986|ref|ZP_07192143.1| PPIC-type PPIASE domain protein [Escherichia coli MS 196-1] gi|301303670|ref|ZP_07209791.1| PPIC-type PPIASE domain protein [Escherichia coli MS 124-1] gi|301325465|ref|ZP_07218948.1| PPIC-type PPIASE domain protein [Escherichia coli MS 78-1] gi|301646160|ref|ZP_07246059.1| PPIC-type PPIASE domain protein [Escherichia coli MS 146-1] gi|307140476|ref|ZP_07499832.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli H736] gi|307313647|ref|ZP_07593267.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli W] gi|309784487|ref|ZP_07679125.1| peptidyl-prolyl cis-trans isomerase C [Shigella dysenteriae 1617] gi|309796284|ref|ZP_07690694.1| PPIC-type PPIASE domain protein [Escherichia coli MS 145-7] gi|312969494|ref|ZP_07783696.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli 2362-75] gi|312971941|ref|ZP_07786115.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli 1827-70] gi|331644509|ref|ZP_08345629.1| peptidyl-prolyl cis-trans isomerase C (PPIase C)(Rotamase C) (Parvulin) [Escherichia coli H736] gi|331649601|ref|ZP_08350683.1| peptidyl-prolyl cis-trans isomerase C (PPIase C)(Rotamase C) (Parvulin) [Escherichia coli M605] gi|331655460|ref|ZP_08356453.1| peptidyl-prolyl cis-trans isomerase C (PPIase C)(Rotamase C) (Parvulin) [Escherichia coli M718] gi|331660119|ref|ZP_08361055.1| peptidyl-prolyl cis-trans isomerase C (PPIase C)(Rotamase C) (Parvulin) [Escherichia coli TA206] gi|331670621|ref|ZP_08371458.1| peptidyl-prolyl cis-trans isomerase C (PPIase C)(Rotamase C) (Parvulin) [Escherichia coli TA271] gi|331679885|ref|ZP_08380548.1| peptidyl-prolyl cis-trans isomerase C (PPIase C)(Rotamase C) (Parvulin) [Escherichia coli H591] gi|331685496|ref|ZP_08386080.1| peptidyl-prolyl cis-trans isomerase C (PPIase C)(Rotamase C) (Parvulin) [Escherichia coli H299] gi|332282716|ref|ZP_08395129.1| peptidyl-prolyl cis-trans isomerase C [Shigella sp. D9] gi|71159799|sp|P0A9L7|PPIC_ECO57 RecName: Full=Peptidyl-prolyl cis-trans isomerase C; Short=PPIase C; AltName: Full=Parvulin; AltName: Full=Rotamase C gi|71159800|sp|P0A9L6|PPIC_ECOL6 RecName: Full=Peptidyl-prolyl cis-trans isomerase C; Short=PPIase C; AltName: Full=Parvulin; AltName: Full=Rotamase C gi|71159801|sp|P0A9L5|PPIC_ECOLI RecName: Full=Peptidyl-prolyl cis-trans isomerase C; Short=PPIase C; AltName: Full=Par10; AltName: Full=Parvulin; AltName: Full=Rotamase C gi|12518636|gb|AAG58970.1|AE005609_2 peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli O157:H7 str. EDL933] gi|26110945|gb|AAN83129.1|AE016769_244 Peptidyl-prolyl cis-trans isomerase C [Escherichia coli CFT073] gi|693800|gb|AAB32054.1| parvulin [Escherichia coli] gi|836657|gb|AAA67578.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli str. K-12 substr. MG1655] gi|1790211|gb|AAC76780.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli str. K-12 substr. MG1655] gi|13364184|dbj|BAB38132.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. Sakai] gi|73857766|gb|AAZ90473.1| peptidyl-prolyl cis-trans isomerase C [Shigella sonnei Ss046] gi|81243191|gb|ABB63901.1| peptidyl-prolyl cis-trans isomerase C [Shigella dysenteriae Sd197] gi|81247541|gb|ABB68249.1| peptidyl-prolyl cis-trans isomerase C [Shigella boydii Sb227] gi|85676272|dbj|BAE77522.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli str. K12 substr. W3110] gi|91074871|gb|ABE09752.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli UTI89] gi|110345697|gb|ABG71934.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli 536] gi|115515162|gb|ABJ03237.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli APEC O1] gi|157068930|gb|ABV08185.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli HS] gi|157081030|gb|ABV20738.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli E24377A] gi|157081612|gb|ABV11290.1| hypothetical protein CKO_00116 [Citrobacter koseri ATCC BAA-895] gi|169757124|gb|ACA79823.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli ATCC 8739] gi|169891099|gb|ACB04806.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli str. K-12 substr. DH10B] gi|187428023|gb|ACD07297.1| peptidyl-prolyl cis-trans isomerase C [Shigella boydii CDC 3083-94] gi|187768876|gb|EDU32720.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4196] gi|188014263|gb|EDU52385.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4113] gi|188487415|gb|EDU62518.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli 53638] gi|189001576|gb|EDU70562.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4076] gi|189359243|gb|EDU77662.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4401] gi|189362581|gb|EDU81000.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4486] gi|189365788|gb|EDU84204.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4501] gi|189373218|gb|EDU91634.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC869] gi|189376805|gb|EDU95221.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC508] gi|190903864|gb|EDV63578.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli B7A] gi|190905356|gb|EDV64990.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli F11] gi|192926238|gb|EDV80877.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli E22] gi|192955621|gb|EDV86097.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli E110019] gi|194412197|gb|EDX28504.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli B171] gi|194417129|gb|EDX33242.1| peptidyl-prolyl cis-trans isomerase C [Shigella dysenteriae 1012] gi|194422458|gb|EDX38457.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli 101-1] gi|208728199|gb|EDZ77800.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4206] gi|208734490|gb|EDZ83177.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4045] gi|208739174|gb|EDZ86856.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4042] gi|209161998|gb|ACI39431.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. EC4115] gi|209753548|gb|ACI75081.1| hypothetical protein ECs4709 [Escherichia coli] gi|209753550|gb|ACI75082.1| hypothetical protein ECs4709 [Escherichia coli] gi|209753552|gb|ACI75083.1| hypothetical protein ECs4709 [Escherichia coli] gi|209753554|gb|ACI75084.1| hypothetical protein ECs4709 [Escherichia coli] gi|209753556|gb|ACI75085.1| hypothetical protein ECs4709 [Escherichia coli] gi|215267177|emb|CAS11625.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli O127:H6 str. E2348/69] gi|217322206|gb|EEC30630.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. TW14588] gi|218354225|emb|CAV00876.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli 55989] gi|218358539|emb|CAQ91187.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia fergusonii ATCC 35469] gi|218363107|emb|CAR00747.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli IAI1] gi|218367611|emb|CAR05395.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli S88] gi|218434510|emb|CAR15437.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli UMN026] gi|222035479|emb|CAP78224.1| Peptidyl-prolyl cis-trans isomerase C [Escherichia coli LF82] gi|226838679|gb|EEH70707.1| peptidyl-prolyl cis-trans isomerase C [Escherichia sp. 1_1_43] gi|226902957|gb|EEH89216.1| peptidyl-prolyl cis-trans isomerase C [Escherichia sp. 3_2_53FAA] gi|227834479|gb|EEJ44945.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli 83972] gi|238861994|gb|ACR63992.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli BW2952] gi|242379308|emb|CAQ34119.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli BL21(DE3)] gi|253326642|gb|ACT31244.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975621|gb|ACT41292.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli B str. REL606] gi|253979777|gb|ACT45447.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli BL21(DE3)] gi|254595174|gb|ACT74535.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli O157:H7 str. TW14359] gi|257756467|dbj|BAI27969.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O26:H11 str. 11368] gi|257761595|dbj|BAI33092.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O103:H2 str. 12009] gi|257766857|dbj|BAI38352.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O111:H- str. 11128] gi|260451379|gb|ACX41801.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli DH1] gi|281180826|dbj|BAI57156.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli SE15] gi|282950998|emb|CBG90675.1| peptidyl-prolyl cis-trans isomerase C [Citrobacter rodentium ICC168] gi|290765064|gb|ADD59025.1| Peptidyl-prolyl cis-trans isomerase C [Escherichia coli O55:H7 str. CB9615] gi|291321472|gb|EFE60910.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli B088] gi|291425518|gb|EFE98556.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli FVEC1412] gi|291431009|gb|EFF04004.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli B185] gi|291468168|gb|EFF10665.1| peptidyl-prolyl cis-trans isomerase ppiC [Escherichia coli B354] gi|294491161|gb|ADE89917.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli IHE3034] gi|298276383|gb|EFI17902.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli FVEC1302] gi|299878029|gb|EFI86240.1| PPIC-type PPIASE domain protein [Escherichia coli MS 196-1] gi|300308057|gb|EFJ62577.1| PPIC-type PPIASE domain protein [Escherichia coli MS 200-1] gi|300317877|gb|EFJ67661.1| PPIC-type PPIASE domain protein [Escherichia coli MS 175-1] gi|300355829|gb|EFJ71699.1| PPIC-type PPIASE domain protein [Escherichia coli MS 198-1] gi|300403978|gb|EFJ87516.1| PPIC-type PPIASE domain protein [Escherichia coli MS 84-1] gi|300411587|gb|EFJ94897.1| PPIC-type PPIASE domain protein [Escherichia coli MS 115-1] gi|300420420|gb|EFK03731.1| PPIC-type PPIASE domain protein [Escherichia coli MS 182-1] gi|300453031|gb|EFK16651.1| PPIC-type PPIASE domain protein [Escherichia coli MS 116-1] gi|300462050|gb|EFK25543.1| PPIC-type PPIASE domain protein [Escherichia coli MS 187-1] gi|300524093|gb|EFK45162.1| PPIC-type PPIASE domain protein [Escherichia coli MS 119-7] gi|300840970|gb|EFK68730.1| PPIC-type PPIASE domain protein [Escherichia coli MS 124-1] gi|300847692|gb|EFK75452.1| PPIC-type PPIASE domain protein [Escherichia coli MS 78-1] gi|301075629|gb|EFK90435.1| PPIC-type PPIASE domain protein [Escherichia coli MS 146-1] gi|306906628|gb|EFN37140.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli W] gi|307555905|gb|ADN48680.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli ABU 83972] gi|307628840|gb|ADN73144.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli UM146] gi|308120166|gb|EFO57428.1| PPIC-type PPIASE domain protein [Escherichia coli MS 145-7] gi|308927593|gb|EFP73062.1| peptidyl-prolyl cis-trans isomerase C [Shigella dysenteriae 1617] gi|309704215|emb|CBJ03562.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli ETEC H10407] gi|310334318|gb|EFQ00523.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli 1827-70] gi|312286041|gb|EFR13959.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli 2362-75] gi|312948332|gb|ADR29159.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O83:H1 str. NRG 857C] gi|315063073|gb|ADT77400.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli W] gi|315138353|dbj|BAJ45512.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli DH1] gi|315254139|gb|EFU34107.1| PPIC-type PPIASE domain protein [Escherichia coli MS 85-1] gi|315284674|gb|EFU44119.1| PPIC-type PPIASE domain protein [Escherichia coli MS 110-3] gi|315293140|gb|EFU52492.1| PPIC-type PPIASE domain protein [Escherichia coli MS 153-1] gi|315300850|gb|EFU60072.1| PPIC-type PPIASE domain protein [Escherichia coli MS 16-3] gi|315618524|gb|EFU99110.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli 3431] gi|320176018|gb|EFW51087.1| Peptidyl-prolyl cis-trans isomerase ppiC [Shigella dysenteriae CDC 74-1112] gi|320185436|gb|EFW60205.1| Peptidyl-prolyl cis-trans isomerase ppiC [Shigella flexneri CDC 796-83] gi|320191130|gb|EFW65780.1| Peptidyl-prolyl cis-trans isomerase ppiC [Escherichia coli O157:H7 str. EC1212] gi|320197589|gb|EFW72201.1| Peptidyl-prolyl cis-trans isomerase ppiC [Escherichia coli WV_060327] gi|320198516|gb|EFW73117.1| Peptidyl-prolyl cis-trans isomerase ppiC [Escherichia coli EC4100B] gi|320639260|gb|EFX08882.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. G5101] gi|320644645|gb|EFX13695.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H- str. 493-89] gi|320649970|gb|EFX18473.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H- str. H 2687] gi|320655316|gb|EFX23258.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660941|gb|EFX28384.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O55:H7 str. USDA 5905] gi|320666065|gb|EFX33079.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli O157:H7 str. LSU-61] gi|323155178|gb|EFZ41362.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli EPECa14] gi|323161160|gb|EFZ47078.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli E128010] gi|323167629|gb|EFZ53334.1| peptidyl-prolyl cis-trans isomerase C [Shigella sonnei 53G] gi|323173393|gb|EFZ59022.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli LT-68] gi|323177786|gb|EFZ63370.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli 1180] gi|323182549|gb|EFZ67953.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli 1357] gi|323189501|gb|EFZ74781.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli RN587/1] gi|323380865|gb|ADX53133.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli KO11] gi|323938916|gb|EGB35135.1| ppic-type ppiase domain-containing protein [Escherichia coli E482] gi|323943821|gb|EGB39916.1| ppic-type ppiase domain-containing protein [Escherichia coli H120] gi|323949338|gb|EGB45228.1| ppic-type ppiase domain-containing protein [Escherichia coli H252] gi|323954091|gb|EGB49888.1| ppic-type ppiase domain-containing protein [Escherichia coli H263] gi|323959034|gb|EGB54703.1| ppic-type ppiase domain-containing protein [Escherichia coli H489] gi|323969281|gb|EGB64581.1| ppic-type ppiase domain-containing protein [Escherichia coli TA007] gi|323974360|gb|EGB69488.1| ppic-type ppiase domain-containing protein [Escherichia coli TW10509] gi|324014721|gb|EGB83940.1| PPIC-type PPIASE domain protein [Escherichia coli MS 60-1] gi|324016175|gb|EGB85394.1| PPIC-type PPIASE domain protein [Escherichia coli MS 117-3] gi|324111004|gb|EGC04991.1| ppic-type ppiase domain-containing protein [Escherichia fergusonii B253] gi|324115760|gb|EGC09695.1| ppic-type ppiase domain-containing protein [Escherichia coli E1167] gi|325499251|gb|EGC97110.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia fergusonii ECD227] gi|326344234|gb|EGD67994.1| Peptidyl-prolyl cis-trans isomerase ppiC [Escherichia coli O157:H7 str. 1125] gi|326347939|gb|EGD71653.1| Peptidyl-prolyl cis-trans isomerase ppiC [Escherichia coli O157:H7 str. 1044] gi|330908079|gb|EGH36598.1| peptidyl-prolyl cis-trans isomerase ppiC [Escherichia coli AA86] gi|331036181|gb|EGI08416.1| peptidyl-prolyl cis-trans isomerase C (PPIase C)(Rotamase C) (Parvulin) [Escherichia coli H736] gi|331041471|gb|EGI13619.1| peptidyl-prolyl cis-trans isomerase C (PPIase C)(Rotamase C) (Parvulin) [Escherichia coli M605] gi|331046781|gb|EGI18865.1| peptidyl-prolyl cis-trans isomerase C (PPIase C)(Rotamase C) (Parvulin) [Escherichia coli M718] gi|331052687|gb|EGI24722.1| peptidyl-prolyl cis-trans isomerase C (PPIase C)(Rotamase C) (Parvulin) [Escherichia coli TA206] gi|331062094|gb|EGI34016.1| peptidyl-prolyl cis-trans isomerase C (PPIase C)(Rotamase C) (Parvulin) [Escherichia coli TA271] gi|331072432|gb|EGI43764.1| peptidyl-prolyl cis-trans isomerase C (PPIase C)(Rotamase C) (Parvulin) [Escherichia coli H591] gi|331077197|gb|EGI48411.1| peptidyl-prolyl cis-trans isomerase C (PPIase C)(Rotamase C) (Parvulin) [Escherichia coli H299] gi|332084709|gb|EGI89897.1| peptidyl-prolyl cis-trans isomerase C [Shigella boydii 5216-82] gi|332084933|gb|EGI90115.1| peptidyl-prolyl cis-trans isomerase C [Shigella dysenteriae 155-74] gi|332089057|gb|EGI94168.1| peptidyl-prolyl cis-trans isomerase C [Shigella boydii 3594-74] gi|332105068|gb|EGJ08414.1| peptidyl-prolyl cis-trans isomerase C [Shigella sp. D9] Length = 93 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 21/78 (26%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + Sbjct: 13 KEEKLALDLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 T P TQ G I + Sbjct: 73 EPTGPLHTQFGYHIIKVL 90 >gi|116334085|ref|YP_795612.1| peptidylprolyl isomerase [Lactobacillus brevis ATCC 367] gi|122269231|sp|Q03QE1|PRSA_LACBA RecName: Full=Foldase protein prsA; Flags: Precursor gi|116099432|gb|ABJ64581.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus brevis ATCC 367] Length = 305 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 35/289 (12%), Positives = 80/289 (27%), Gaps = 34/289 (11%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +F+ + ++ + S+ T NG IT+ K Sbjct: 1 MKKWFIALAGLLLTV---TLAGCGSQTVATTNGGKITES-------AYYSSLKGTSSGKQ 50 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 +Q++I+ + + ++ G + V F ++ G S + Sbjct: 51 VLQQMILNKVLE---KQYGDKVSKSAVTKQFDKYKSQYGSSFSSVL-------SQSGMTQ 100 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 L + ++K + ++ + + V + ++ Sbjct: 101 SSLKTEIRSNLLLKEAVKDNVTVTDAQLKKQFKSYEPE---------VSVAHILVSKKST 151 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESD---LHPQFQNLLK 251 + + +S + +K+++ GK +D + K Sbjct: 152 AQTIIKDLKSTKSSDMTSEFTKLAKKYSTDTATKNKGGKLSSFDSTDTSLDSTFKKAAFK 211 Query: 252 KSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 T P TQ G I + G KA L+ Q + Sbjct: 212 LKTGEYTATPVKTQYGYHVILMLKNPGKGTIKEHKAELTKQIIDNDMND 260 >gi|311086454|gb|ADP66535.1| survival protein SurA precursor [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 399 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 46/157 (29%), Gaps = 3/157 (1%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + N K + P L N +K E + + + ++ Sbjct: 240 LKVNDIHHKKENIVTEFYMQHCLIKPSVILTNTEAKKKIFNIYENIKKGIYTFDDAVKNL 299 Query: 223 ASKI-HDVSIGKAQYLLESDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + G ++ + L + L +N + P + G I D+R + Sbjct: 300 SDDYYSSNKKGDLGWISKESLGFDLNKKFLILDKNEISEPVKSNWGWHIFKILDRRQVDA 359 Query: 281 E-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K KI + +++ L++ A I Sbjct: 360 FYKLKKNQAFNIVLNQKIISEKNHWIEDLKNTAYIEI 396 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 86/285 (30%), Gaps = 18/285 (6%) Query: 47 NGEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETLKKQEIEKSGITFDS 99 N E+I + D+++ + LK K L++ +++LIV++L QE I Sbjct: 2 NDEIILNSDVNEILVFLKKSKKKFIIPLKSDFLKEKVLEKLIVDSLILQEANSKNINITK 61 Query: 100 NTVNYFFVQHARNT----GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 ++ A + K ++F + + I + + + Sbjct: 62 EQIDTVIKNIALKKHISVNHFKKQILLRNIKNPSYYDNFIKKIEILLKMKTIQDYELHKR 121 Query: 156 YGNLEME---IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 E E I K + L +L S + K ++ + Sbjct: 122 INISEQEVNTIFKKLIKDNEKFKKINLSYILLPSFKQDSDNAVRNRIKIAENIVYKLKKG 181 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIA 271 L + + K + D+ + F+ L + P V KG+ + Sbjct: 182 YDFEKLLIECEKNKSTFIVKKMFWKPLLDIQNSFFKTLNIFKKGQILGPIVGDKGLYILK 241 Query: 272 ICD---KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + D K++ + + + + + + N Sbjct: 242 VNDIHHKKENIVTEFYMQHCLIKPSVILTNTEAKKKIFNIYENIK 286 >gi|89892051|gb|ABD78868.1| peptidyl-prolyl cis-trans isomerase [Trypanosoma cruzi] gi|322821330|gb|EFZ27686.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, putative [Trypanosoma cruzi] Length = 124 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 3/78 (3%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTT 258 R +A + + +++ S G + ++ FQ T Sbjct: 48 RAMEALKKINEGSSFADVAREYSED-KARSGGDLGWKRRGEMVGPFQEAAFALPKGGMTL 106 Query: 259 NPYVTQKGVEYIAICDKR 276 P T G I + DK+ Sbjct: 107 EPVKTSFGYHIILVEDKQ 124 >gi|242237656|ref|YP_002985837.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dickeya dadantii Ech703] gi|242129713|gb|ACS84015.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dickeya dadantii Ech703] Length = 93 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +++ D + +K ++ + G + D+ P F + + Sbjct: 13 DTEQQAHDLLAQLEQGADFQQLAQKHSTCPSRRNGGDLGEFRKGDMVPAFDKAVFSCELL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 73 KPFGPVKTQFGYHLIKVL 90 >gi|104782209|ref|YP_608707.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas entomophila L48] gi|95111196|emb|CAK15916.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase) [Pseudomonas entomophila L48] Length = 93 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 24/80 (30%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 + + + + + ++ G + +F ++ + N Sbjct: 14 EDQCNELKAQIEAGADFAEIAKANSTCPSSRQGGDLGSFGPGQMVREFDTVVFSAPLNVV 73 Query: 259 -NPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|71891915|ref|YP_277645.1| peptidyl-prolyl cis-trans isomerase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|122070620|sp|Q493R5|SURA_BLOPB RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor gi|71796021|gb|AAZ40772.1| peptidyl-prolyl cis-trans isomerase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 425 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 100/270 (37%), Gaps = 13/270 (4%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE------ 73 ++IF + + + +I +N +I D DI I +++ +NG Sbjct: 6 IFILIFTLKTNIVLGALKTVDKIVALVNHNIILDSDIRHNIYMIQDNILNGNDNILQDIS 65 Query: 74 --KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + + +LI++ L Q ++ I D +N ++ + F ++L G+ Sbjct: 66 HYQKILDQLIIDNLIFQISDQQKINIDHTQLNQMINCILNLYDMTFDKFRAYLYDIGLNY 125 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI-PANKQKMKNITVREYLIRTVLFSIPDN 190 F + + + + L EI K+ +++ +R + FS+P Sbjct: 126 EKFYFQQYQHMLKKQICDHVMHDRAHILTNEINKIVKKSNIIDINKQFKLRHITFSLPIQ 185 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS---IGKAQYLLESDLHPQF- 246 +Q + + + +L + S + + + + +++ D+ F Sbjct: 186 PTPSQIDRIEYFARLLIKKKEFNNNIKELIRTYSNKNIIQIIKVHETEWVSWKDIPIIFD 245 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 + L ++ + P ++ G+ + I D R Sbjct: 246 KYLQTINKGDVIGPIISCDGIHIVEIQDIR 275 Score = 45.1 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 31/279 (11%), Positives = 75/279 (26%), Gaps = 20/279 (7%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I +I+K + + IN + + L T ++ Sbjct: 152 ILTNEINKIVKKSNIIDINKQFK------LRHITFSLPIQPTPSQIDRIEYFARLLIKKK 205 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM--------- 161 E ++ +K I + + ++ + ++ ++ Sbjct: 206 EFNNNIKELIRTYSNKNIIQIIKVHETEWVSWKDIPIIFDKYLQTINKGDVIGPIISCDG 265 Query: 162 ----EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 EI + K + V + + + + + ++ E+S Sbjct: 266 IHIVEIQDIRYKQIMLPVTKVTAKIFGIQNSCENISIVEQLLQIKENMEKSNTAFNMMIK 325 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + K + L+ + L N + P T G I + D Sbjct: 326 EKSKD-ICFNHYEENTICKDLDDFEPSIRKALSSLKSNEISIPVHTSCGWRLIQLIDISI 384 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 L + K ++ ++++LRS + I Sbjct: 385 LEYNEIMYERAYLYLLNNKFDEIMKNWIQELRSESYIKI 423 >gi|118579009|ref|YP_900259.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelobacter propionicus DSM 2379] gi|118501719|gb|ABK98201.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelobacter propionicus DSM 2379] Length = 243 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 21/80 (26%), Gaps = 1/80 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 + + + + +S G + P+F + + N Sbjct: 11 DTEDLCLKLKTEIEAGADFADVARRESSCPSRQQGGDLGTFNPGQMVPEFDHAVFTGEVN 70 Query: 256 NTTNPYVTQKGVEYIAICDK 275 P TQ G I + + Sbjct: 71 KLLGPVQTQFGYHLIEVTRR 90 >gi|229056773|ref|ZP_04196175.1| Foldase protein prsA 1 [Bacillus cereus AH603] gi|228720567|gb|EEL72131.1| Foldase protein prsA 1 [Bacillus cereus AH603] Length = 244 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 25/221 (11%), Positives = 58/221 (26%), Gaps = 11/221 (4%) Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 V V D K + + Sbjct: 7 KQVLNNMVMEKVLIKNYKVDDKEVDKKFDEMKKQVGDQFDTLMKQQGLKEETVKNGVRAS 66 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + A ++ + + +++ V S K + K E + Sbjct: 67 LAQEQAIEKTITDKELKDNYKPQVKASHILVKDEATAKKVK------EELGQGKSFEELA 120 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277 ++++ G + + +F++ K ++ + P TQ G I + D ++ Sbjct: 121 KQYSEDTASKEKGGDLGFFEHGKMVKEFEDAAYKLKKDEVSEPVKTQFGYHIIKVTDIKE 180 Query: 278 L-GGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRSNAIIH 315 KA L + K + + + + K A + Sbjct: 181 PEKSFEQSKADLKKELVAKKAQDGEFMNDLMMKEIKKADVK 221 >gi|152955223|emb|CAM59672.1| parvulin-type peptidyl-prolyl cis/trans isomerase [Lotus japonicus] Length = 145 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 9/103 (8%), Positives = 32/103 (31%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R +L + + + + ++ + ++++ G Sbjct: 44 TYVKARHILCEKQGKINEAYKKL-QDGWLSNGDKVPPAEFAKIAQEYSECPSGKKGGDLG 102 Query: 236 YLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRD 277 + + FQ++ + T+ P+ + G I +++ Sbjct: 103 WFPRGKMAGPFQDVAFNTVVGATSAPFKSTHGYHIILSEGRKN 145 >gi|58697113|ref|ZP_00372552.1| peptidyl-prolyl cis-trans isomerse D, putative [Wolbachia endosymbiont of Drosophila simulans] gi|225630407|ref|YP_002727198.1| peptidyl-prolyl cis-trans isomerse D, putative [Wolbachia sp. wRi] gi|58536595|gb|EAL59930.1| peptidyl-prolyl cis-trans isomerse D, putative [Wolbachia endosymbiont of Drosophila simulans] gi|225592388|gb|ACN95407.1| peptidyl-prolyl cis-trans isomerse D, putative [Wolbachia sp. wRi] Length = 599 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 31/377 (8%), Positives = 84/377 (22%), Gaps = 77/377 (20%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ- 66 ++ +F +T + + V + + S + EVIT + Q Sbjct: 2 NVKNFFTKVTVVLLACLLIFVGVGNLLSGDDEKEEVARVGKEVITSDEYKSLYQNYGKQI 61 Query: 67 -------KINGELEKIAVQELIVETLKKQ-----------------------------EI 90 + +L+ + LI + L E Sbjct: 62 SGSDASREQVKKLKYDLLNALIEQKLLFNLTSELGLTVGEESIKNHIKNTKYFQNDKGEF 121 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 +K+ N ++ ++ + I+ + Sbjct: 122 DKNKFHETLNDLHMTEKEYIAKLEKILPAMMFMTSLFKDNYPVTFGEKIDEQIYNSRYQT 181 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD------ 204 + E + + + Y F P+ + ++++ + Sbjct: 182 RVVDIVKITEDAVTNIPEPDDQTLLDLYERNKSHFYYPEYRTAQYISLEQKYFEDQIKIS 241 Query: 205 ---------AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--------- 246 +E R + + + +F Sbjct: 242 DEEVDGIIEQQELRDQRDIFNIIFSTKEEAETARRAFEEGKTSFEQIVEEFGKAELEETR 301 Query: 247 --------------QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSA 290 + + + + G I + + E LK + + Sbjct: 302 VNNITKDFLPEDMREKVFALKVGEVSEVLASSFGWHIIKVESAHQISDEDLVDLKKDIKS 361 Query: 291 QNTPTKIEKHEAEYVKK 307 T K + +++ + Sbjct: 362 VLTNQKSFERVNDFINQ 378 >gi|157374718|ref|YP_001473318.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sediminis HAW-EB3] gi|157317092|gb|ABV36190.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sediminis HAW-EB3] Length = 92 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 9/79 (11%), Positives = 25/79 (31%), Gaps = 1/79 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 + + ++ ++ L + + +S G + +F + + N Sbjct: 13 TEVQCEELKQQILAGADFGDVAKANSSCPSGAQGGDLGSFGPGMMVKEFDEVVFSAPLNE 72 Query: 257 TTNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 73 VQGPVKTQFGYHLLEVTSR 91 >gi|115479119|ref|NP_001063153.1| Os09g0411700 [Oryza sativa Japonica Group] gi|50252332|dbj|BAD28365.1| putative peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Oryza sativa Japonica Group] gi|113631386|dbj|BAF25067.1| Os09g0411700 [Oryza sativa Japonica Group] gi|215764953|dbj|BAG86650.1| unnamed protein product [Oryza sativa Japonica Group] gi|215768084|dbj|BAH00313.1| unnamed protein product [Oryza sativa Japonica Group] Length = 148 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 12/103 (11%), Positives = 32/103 (31%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R VL + +Q D + + ++++ G Sbjct: 47 TYVKARHVLCEKQGKINEAYKKLQDGWLDNGDKVP-PAEFAKIAQEYSECPSGKKGGDLG 105 Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277 + + FQ++ + T+ P+ + G +I +++ Sbjct: 106 WFPRGKMAGPFQDVAFSTPVGATSAPFKSTHGYHFILCEGRKN 148 >gi|219871319|ref|YP_002475694.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus parasuis SH0165] gi|219691523|gb|ACL32746.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus parasuis SH0165] Length = 624 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 22/282 (7%), Positives = 71/282 (25%), Gaps = 21/282 (7%) Query: 53 DGDISKRIALLKLQKINGELEKIAV---------------QELIVETLKKQEIEKSGITF 97 +I A + K N L + A+ + ++ +++ + S Sbjct: 117 KSEIVNSPAFQQDGKFNNNLYQQALRNNGLTADGYAAIVYEGMLFAQIQEAIVNSSFTVP 176 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + + R L+ + ++ Q + Y + + Sbjct: 177 AQQELLAKLLLQKRQVRLATYSIAKEVNNQTASAEEMQAYYEANKANFVNPEKLTVEYIS 236 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV--QKRIKDAEESRLRLPKD 215 ++ Q Y ++ V + + ++ + Sbjct: 237 IEPKDLANKIQVTNEQIDTYYQTNKAKYTTKGEAKIAHIQVATEAEANEIVQALAKGEDF 296 Query: 216 CNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273 + + + G + F++ T+ P I + Sbjct: 297 AQLAKAKSQDKLSAAQGGDLGWAKAGVFPKAFEDAANMLDAGKTSQPIKVDNAFHIIKVL 356 Query: 274 DK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 ++ + +KA ++ + + +++ + A Sbjct: 357 ERNVETVVPLEKVKAQITDTIRNELLLTEYSNITREMANVAF 398 Score = 46.2 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 24/238 (10%), Positives = 66/238 (27%), Gaps = 20/238 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ ++ F L+ V + +NGE I+ S+ Sbjct: 1 MIEKMHEKSGGWV--FKIIFALVSLSFVLGGIGGGLIATDNSVAKVNGEEISQQVFSRAK 58 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + L+ + L +Q + I ++ + Sbjct: 59 NQQQNILNAQLGERFWDLMDNPIYVKQFHESILNGLVDDELLRQYAKSLKIDVSADQIKS 118 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 V + + + Y A ++ ++ N +P Sbjct: 119 EIVNSPAFQQDGKFNNNLYQQALRNNGLTADGYAA--IVYEGMLFAQIQEAIVNSSFTVP 176 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 A ++ + + +++ +R +SI ++ E ++ ++ Sbjct: 177 AQQELLAKLLLQKRQVRLATYSIAKEVNNQTASAEEMQAYYEANKANFVNPEKLTVEY 234 >gi|218692055|ref|YP_002400267.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli ED1a] gi|218429619|emb|CAR10580.2| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli ED1a] Length = 93 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 21/78 (26%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + Sbjct: 13 KEEKLALDLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 T P TQ G I + Sbjct: 73 EPTGPLHTQFGYHIIKVL 90 >gi|15611671|ref|NP_223322.1| hypothetical protein jhp0604 [Helicobacter pylori J99] gi|4155156|gb|AAD06185.1| putative [Helicobacter pylori J99] Length = 413 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 91/291 (31%), Gaps = 37/291 (12%) Query: 32 SYKSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 + + + ++ +NG IT I + Q+ + + A LI E +K Sbjct: 147 NATNNTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKN 200 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 QEIE+ I D + ++ A+ G+ + F L +G ++ L ++ Sbjct: 201 QEIERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQEL 259 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 ++N + + NQ +++ + D Sbjct: 260 LRNILLTNVDTSSETKMREYYNKHKEQFSIPTEIETVRY----TSTNQEDLERAMADPNL 315 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG- 266 + K K + L+PQ + + + P + G Sbjct: 316 EVPGVSKANEK------------------IEMKTLNPQIAQVFISHEQGSFTPVMNGGGG 357 Query: 267 -VEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I +KR K +++ + +K E+ +KLR + I Sbjct: 358 QFITFYIKEKRGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 408 >gi|71413418|ref|XP_808848.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Trypanosoma cruzi strain CL Brener] gi|70873138|gb|EAN86997.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, putative [Trypanosoma cruzi] Length = 124 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 25/82 (30%), Gaps = 3/82 (3%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQ 254 Q R +A + + +++ S G + ++ FQ Sbjct: 44 EKQGRAMEALKKINEGSSFADIAREYSED-KARSGGDLGWKRRGEMVGPFQEAAFALPKG 102 Query: 255 NNTTNPYVTQKGVEYIAICDKR 276 T P T G I + DK+ Sbjct: 103 GMTPEPVRTSFGYHIILVEDKQ 124 >gi|126662093|ref|ZP_01733092.1| possible peptidyl-prolyl cis-trans isomerase [Flavobacteria bacterium BAL38] gi|126625472|gb|EAZ96161.1| possible peptidyl-prolyl cis-trans isomerase [Flavobacteria bacterium BAL38] Length = 653 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 28/274 (10%), Positives = 70/274 (25%), Gaps = 10/274 (3%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 +N +T+ + + + E+ + L+ E Q+ K+ Sbjct: 102 VNDSKVTNELVKEAYDRM-----QQEVRASHILVLVDEGALPQDTLKAYNKVIEIKRRLD 156 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + + S + G + + Sbjct: 157 AGEDFITVAQQTSEDPSVKENNGDLGYFSAFRMVYPFENAAYNTKVGQVSKPFRTRFGYH 216 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + R + + + N + I D + + + ++F+ Sbjct: 217 IVKVLDKRVNRGEVTVAHIMIVKQNDAAQNEKAKTTIDDIYKKIQQGEAFESLAQQFSED 276 Query: 226 -IHDVSIGKAQYLLESDLHPQFQNLLKKS---QNNTTNPYVTQKGVEYIAICDKRDLGGE 281 G Q L + + ++ + P+ +Q G + + +K + Sbjct: 277 KSSAPKGGVLQRFGSGQLSSEEFENVAFELKEKDQISVPFQSQFGWHIVKLIEKHPVRSF 336 Query: 282 IALKAYLSAQNT-PTKIEKHEAEYVKKLRSNAII 314 +K L + + KKLR I Sbjct: 337 DEMKFELEEKIRKDERSLLITNSLAKKLRDKYTI 370 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 15/176 (8%), Positives = 46/176 (26%), Gaps = 2/176 (1%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 Q+ + ++ K+ + ++ Q+ Sbjct: 86 YQNELKSYRNQLSKNYVNDSKVTNELVKEAYDRMQQEVRASHILVLVDEGALPQDTLKAY 145 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257 ++ + + ++ + + G Y + F+N Sbjct: 146 NKVIEIKRRLDAGEDFITVAQQTSEDPSVKENNGDLGYFSAFRMVYPFENAAYNTKVGQV 205 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + P+ T+ G + + DKR GE+ + + + + + + Sbjct: 206 SKPFRTRFGYHIVKVLDKRVNRGEVTVAHIMIVKQNDAAQNEKAKTTIDDIYKKIQ 261 >gi|50123136|ref|YP_052303.1| peptidyl-prolyl cis-trans isomerase C [Pectobacterium atrosepticum SCRI1043] gi|49613662|emb|CAG77113.1| peptidyl-prolyl cis-trans isomerase C [Pectobacterium atrosepticum SCRI1043] Length = 93 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 23/78 (29%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 ++ D + +K ++ + G + D+ P F + + Sbjct: 13 DTEQLANDILAQLEKGADFQKLAQKHSTCPSKRNGGDLGEFRKGDMVPAFDKAVFSCELL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 73 KPFGPVKTQFGYHVIKVL 90 >gi|47218949|emb|CAF98147.1| unnamed protein product [Tetraodon nigroviridis] Length = 1206 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 11/106 (10%), Positives = 29/106 (27%), Gaps = 1/106 (0%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + R + + + ++ E+ + K + +F+ Sbjct: 47 KVRCSHLLVKHNQSRRPSSWRQQNITRTKEEALELIQGYIEDIKSGKEKFESLASQFSDC 106 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + + P T GV I Sbjct: 107 SSAKNGGDLGLFGRGQMQKPFEDASFALKVGDMSGPVFTDSGVHVI 152 >gi|322514009|ref|ZP_08067083.1| peptidyl-prolyl cis-trans isomerase [Actinobacillus ureae ATCC 25976] gi|322120159|gb|EFX92120.1| peptidyl-prolyl cis-trans isomerase [Actinobacillus ureae ATCC 25976] Length = 625 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 17/284 (5%), Positives = 62/284 (21%), Gaps = 32/284 (11%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 + + +N E + I + I + + +L+++ + + Sbjct: 143 NNGLSADGYAAIVN-EAMLFSQIQEGIVGSHFSVPAE---QELLAKLLLQKRQVRLAN-- 196 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 A N F + + + + + Sbjct: 197 -------------YSVAAEAQNQTASGEELQAYYDAHKNAFVEPEKLAIEYVTLTPENVA 243 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + +I +K K V + + + + Sbjct: 244 KNVQVTDEQIATYYEKNKADYVTQGETHIAHIQVANEADAKALE---------QQLAGGA 294 Query: 214 KDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + ++ + G + F++ + I Sbjct: 295 DFSALAKAKSTDKLSAAQGGDLGWAKVGTFPKAFEDAANGLQVGAVSQAVNVDGAYHIIK 354 Query: 272 ICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + ++ +K ++ + + +++ + A Sbjct: 355 VLARKNEQAIPLEQVKDNIAKTIRNELLLTEYSNLAREMANKAF 398 Score = 46.2 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 16/182 (8%), Positives = 48/182 (26%), Gaps = 21/182 (11%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + + F L+ V A +NG I + Sbjct: 1 MIEKMHERTNGPV--FKIIFALVSLSFVITGIGTGLAGVDTSAAKVNGTAIEQQAFNAAK 58 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + + LI + L +Q + + + + Sbjct: 59 SRQQNILNTQMGERFWDLLDTPEYAAQFNQSILNGLIDDELLRQYAQNLKLGISAEQIKS 118 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 V ++ + + + L G+ + + + ++ + + + Sbjct: 119 EIVHSPTFQQDGKFNNQLYQQALRNNGLSADGYAAIVNEAMLFSQIQEGIVGSHFSVPAE 178 Query: 162 EI 163 + Sbjct: 179 QE 180 >gi|165976428|ref|YP_001652021.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876529|gb|ABY69577.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 625 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 17/252 (6%), Positives = 54/252 (21%), Gaps = 15/252 (5%) Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH--ARNTGLSAEDFSSFLD 125 G L + +I E E + A+ A Sbjct: 156 NEGMLFSQIQEGVIGSDFNVPEQEALLAKLLLQKRQVRLANYSIAKEATNQAASAEELQK 215 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + + + + + D + ++ +K K + R Sbjct: 216 YYDAHKSELIEPEKLTVEYVTLTPTDVANNVQVNDEQVKTYYEKNKADYATKGETRFAHI 275 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHP 244 + + E + ++ + G + Sbjct: 276 QLANETDAKAVA---------EQVKNGADFAELAKTKSTDKLSAAQGGDLGWAKAGTFPK 326 Query: 245 QFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHE 301 F+ + I + +++ + +K ++ + Sbjct: 327 AFEAAAASLQDGQVSAVVNVDGAYHIIKVLERKAETVIPLEQVKDQITKTIRQELLLTEY 386 Query: 302 AEYVKKLRSNAI 313 + +++ + A Sbjct: 387 SNIAREMANRAF 398 Score = 42.7 bits (98), Expect = 0.070, Method: Composition-based stats. Identities = 21/230 (9%), Positives = 55/230 (23%), Gaps = 21/230 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + F L+ V +NG IT + Sbjct: 1 MIENMHERTKGPV--FKIIFALVSLSFVITGIGTGLVGGGTAAVKVNGTEITQQAFNAAK 58 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + + + L+ E L +Q ++ + + + Sbjct: 59 NRQQSVLNAQMGERFWDLLDTPEYAKQFNQSVLNGLVDEELLRQYAKELKLGISAEQIKS 118 Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 ++ S + + L G+ + + + ++ + + + E Sbjct: 119 EIVNSPVFQQDGKFSNDLYQQTLRSNGLSADGYAAIVNEGMLFSQIQEGVIGSDFNVPEQ 178 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 E K ++ VR + + +E Sbjct: 179 EALLAKLLLQKRQVRLANYSIAKEATNQAASAEELQKYYDAHKSELIEPE 228 >gi|227114356|ref|ZP_03828012.1| peptidyl-prolyl cis-trans isomerase C [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 93 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 23/78 (29%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 ++ D + +K ++ + G + D+ P F + + Sbjct: 13 DTEQEANDILAQLEKGADFQKLAQKHSTCPSKRNGGDLGEFRKGDMVPAFDKAVFSCELL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 73 KPFGPVKTQFGYHVIKVL 90 >gi|78187764|ref|YP_375807.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Chlorobium luteolum DSM 273] gi|78167666|gb|ABB24764.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Chlorobium luteolum DSM 273] Length = 701 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 11/103 (10%), Positives = 30/103 (29%), Gaps = 2/103 (1%) Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIG 232 + +L + +D + ++++ I S G Sbjct: 342 SQPVARASHILIGFNPANRAEAQQAGAKAQDILRQLKGGASFADLARRYSADIGSARSGG 401 Query: 233 KAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICD 274 + + + P+F + + + P T+ G+ I + Sbjct: 402 QLGWFRSERMVPEFADAVFSAAPGTVVGPVATRFGLHIIKVEG 444 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 34/122 (27%), Gaps = 4/122 (3%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 +Q + + ++ F + S G P + + Sbjct: 578 KKLQALVSVPGATLQKIAAADKNFSLFTADDIRWSDGFIPGYGVDR--PLVEAMAGMPVQ 635 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIAL--KAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + P G + K G KA ++ + K E+ +EY +R A Sbjct: 636 KLSLPVRGNDGFAVFMVQKKTLPEGLDPALEKAAVAPRLLQMKQEQLFSEYFASIRKQAK 695 Query: 314 IH 315 I Sbjct: 696 IE 697 >gi|228472535|ref|ZP_04057295.1| PpiC-type secreted peptidyl-prolyl cis-trans isomerase [Capnocytophaga gingivalis ATCC 33624] gi|228275948|gb|EEK14704.1| PpiC-type secreted peptidyl-prolyl cis-trans isomerase [Capnocytophaga gingivalis ATCC 33624] Length = 707 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 26/259 (10%), Positives = 65/259 (25%), Gaps = 20/259 (7%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 ++D +I + K Q E+ + ET + +I++ + + Sbjct: 211 KVSDAEIDAYVKAHKKQFEQKEMRN-IQFVWVTETASEADIKQVEQSLQALNAPRVVYNS 269 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI----------WPDVVKNDFMLKYGNL 159 R + F + K + + S+ + + N + Sbjct: 270 QRQANDTLPGFGALAAKDVPQFVNENSDVPFDSLYVSKDRLPADHAEALYNLPVGDLYGP 329 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDN--------KLQNQGFVQKRIKDAEESRLR 211 E + +R I +++ + + +D Sbjct: 330 YKEANTYRYTRMLSKKPNAQMRASHILIAYKGSLPGNETITRSKEEAKAKAEDILAKVKA 389 Query: 212 LPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 + + G + + P F + + + T G I Sbjct: 390 GEDYAALAMVNSDDSSNAPNGGDLDFFSPGMMVPTFNDYVFHGKVGDIGLVETNFGFHII 449 Query: 271 AICDKRDLGGEIALKAYLS 289 I D+R+ + + Sbjct: 450 KITDQREGVQLATIVRNIE 468 Score = 43.9 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 22/77 (28%), Gaps = 1/77 (1%) Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 + Q + P GV I + K D+ + + A K+ Sbjct: 625 QGSEPSVLGAAFALPQGKVSQPIAGDNGVYVIQVTQK-DIAPALPNYSSYMAPLRNQKLN 683 Query: 299 KHEAEYVKKLRSNAIIH 315 + + L + A I Sbjct: 684 RASQDLFSALEATADIK 700 >gi|242049250|ref|XP_002462369.1| hypothetical protein SORBIDRAFT_02g024520 [Sorghum bicolor] gi|241925746|gb|EER98890.1| hypothetical protein SORBIDRAFT_02g024520 [Sorghum bicolor] Length = 152 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 10/103 (9%), Positives = 28/103 (27%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R VL + +Q D + + ++++ G Sbjct: 51 TYVKARHVLCEKQGKINEAYKKLQDGWLDNGDKVP-PAEFAKVAQEYSECPSGKKGGDLG 109 Query: 236 YLLESDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + P + + P+ + G +I +++ Sbjct: 110 WFPRGKMAGPFQEVAFNTPVGACSAPFKSTHGYHFILCEGRKN 152 >gi|285016918|ref|YP_003374629.1| ppic-type peptidyl-prolyl cis-trans isomerase; protein [Xanthomonas albilineans GPE PC73] gi|283472136|emb|CBA14643.1| hypothetical ppic-type peptidyl-prolyl cis-trans isomerase; protein [Xanthomonas albilineans] Length = 290 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 28/306 (9%), Positives = 72/306 (23%), Gaps = 36/306 (11%) Query: 9 LSDFIKL--LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66 +S F + L F + + + A + + + T + Sbjct: 1 MSLFFAKSAVLAVCALTAFVALAMPADVGTAAVDPVVLRVGAQQFTASEYHA-------- 52 Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 L E + + AR L + + + Sbjct: 53 -------------LAGEGTRGVASIDDPSVVRRFADRAILLDQARQQHLQDDPVVAARLR 99 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + A + ++ ++ + + ++ Sbjct: 100 RAADAILADAARARLGATAQIDESMLHQQFAAYPDDYTEYHLRHL------FVALHPQGG 153 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQ 245 + + +R + + + G+ L Sbjct: 154 PRGGQSLTEAQALQRAEALKRQLDGGADFATLAMHESDDGATAAEGGQLSPTFGRYLADA 213 Query: 246 F-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F + + + N + P G I + K D A++ + Q E+ A+ Sbjct: 214 FVAPIHQLAVNQVSAPVRGPDGYHLIYLDAKTDAR-FEAVRGQIELQLR----EQAAADA 268 Query: 305 VKKLRS 310 +++LR Sbjct: 269 MQRLRQ 274 >gi|320101858|ref|YP_004177449.1| hypothetical protein Isop_0305 [Isosphaera pallida ATCC 43644] gi|319749140|gb|ADV60900.1| hypothetical protein Isop_0305 [Isosphaera pallida ATCC 43644] Length = 449 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 39/293 (13%), Positives = 73/293 (24%), Gaps = 19/293 (6%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 S ING+VIT +S + ++ LI L Q I+ Sbjct: 69 AIPVNPSDPVAVINGQVITRQMLSDECVARRGV--------EILETLIARVLIDQAIQAQ 120 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 G++ + +N A+ + +QY ++ Sbjct: 121 GLSVTAEEINAEIDSVAQRM-AGLSREAWLKTLYKERGISPEQYARDIIYPTLALRKLAE 179 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRT----VLFSIPDNKLQNQGFVQKRIKDAEESR 209 ++ +R +I V I N G +K + Sbjct: 180 PLVQITPKDLQIAFDATYGDKLRCRMIMVDKLRVAQEIWQELKANPGGFEKIAMERSMDL 239 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLE-SDLHPQFQNLLKKSQNNTTNPYV-TQKGV 267 E + ++ A + K + T P ++ Sbjct: 240 NTRSLGGLIAEPISRHAAPETVSAAAFAQLVDGNPNDKDPSHKPKDGDITGPIQVSETSW 299 Query: 268 EYIAICDKRDLGGEIALKAYLSAQN----TPTKIEKHEAEYVKKLRSNAIIHY 316 + + ++AQ TKI++ E L A I Sbjct: 300 IILKREAVIPAQAKDPNDPAIAAQLEELVRDTKIKEKMGEVFNALMKRAQIEN 352 >gi|255636250|gb|ACU18465.1| unknown [Glycine max] Length = 292 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 11/100 (11%), Positives = 33/100 (33%), Gaps = 1/100 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 QK + D ++ + +++ G ++ + + P+F+ + Sbjct: 96 EDDQKLLLDIQQRISSGEDLSDLAVEYSLCPSKEEGGMLGWVRKGQMVPEFEEAAFTAPL 155 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSAQNTP 294 N T+ G + + +R+ ++ L + Sbjct: 156 NKVVSCKTKFGWHLLQVLSEREESILQDIQPDELHVKIQD 195 >gi|261823433|ref|YP_003261539.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pectobacterium wasabiae WPP163] gi|261607446|gb|ACX89932.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pectobacterium wasabiae WPP163] Length = 93 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 23/78 (29%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 ++ D + +K ++ + G + D+ P F + + Sbjct: 13 DTEQLASDILAQLEKGADFQKLAQKHSTCPSKRNGGDLGEFRKGDMVPAFDKAVFSCELL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 73 KPFGPVKTQFGYHVIKVL 90 >gi|297851036|ref|XP_002893399.1| peptidyl-prolyl cis-trans isomerase PPIC-type family protein [Arabidopsis lyrata subsp. lyrata] gi|297339241|gb|EFH69658.1| peptidyl-prolyl cis-trans isomerase PPIC-type family protein [Arabidopsis lyrata subsp. lyrata] Length = 142 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 10/103 (9%), Positives = 31/103 (30%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R VL + + + + ++ + +++ G Sbjct: 41 TYVKARHVLCEKQGKINEAYKKL-QDGWLSNGDKVPPAEFAKIAAEYSECPSGKKGGDLG 99 Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277 + + FQ++ + T+ P+ + G I +++ Sbjct: 100 WFPRGKMAGPFQDVAFNTPVGVTSAPFKSTHGYHIILSEGRKN 142 >gi|18395946|ref|NP_564250.1| peptidyl-prolyl cis-trans isomerase PPIC-type family protein [Arabidopsis thaliana] gi|9797744|gb|AAF98562.1|AC013427_5 Contains similarity to peptidyl-prolyl cis-trans isomerase EPVH from Homo sapiens gb|AF143096 and contains a Rotamase (PPIC-type PPIASE) PF|00639 domain. ESTs gb|T45176, gb|F14479, gb|AA586142, gb|F14459, gb|AI997648 come from this gene [Arabidopsis thaliana] gi|12083236|gb|AAG48777.1|AF332414_1 unknown protein [Arabidopsis thaliana] gi|21553425|gb|AAM62518.1| unknown [Arabidopsis thaliana] gi|332192582|gb|AEE30703.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Arabidopsis thaliana] Length = 142 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 10/103 (9%), Positives = 31/103 (30%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R VL + + + + ++ + +++ G Sbjct: 41 TYVKARHVLCEKQGKINEAYKKL-QDGWLSNGDKVPPAEFAKIAAEYSECPSGKKGGDLG 99 Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277 + + FQ++ + T+ P+ + G I +++ Sbjct: 100 WFPRGKMAGPFQDVAFNTPVGVTSAPFKSTHGYHIILSEGRKN 142 >gi|157375095|ref|YP_001473695.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type [Shewanella sediminis HAW-EB3] gi|157317469|gb|ABV36567.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type [Shewanella sediminis HAW-EB3] Length = 270 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 16/175 (9%), Positives = 44/175 (25%), Gaps = 5/175 (2%) Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 +++ + + T + + K + Sbjct: 82 QKLLETQVIYDDPKEDDCQRYFDNNRAKFTTMPLMEVDHILLAAAKDDIKGRDDAKTDAN 141 Query: 205 AEESRLRLPK--DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPY 261 SRL+ + + ++ + G + P+F+ + + + P Sbjct: 142 DIISRLQDDPSLFADLAKHHSACPSKETGGSLGQISNGQTVPEFERQLMLLPEGLASKPL 201 Query: 262 VTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 ++ G+ + I K + + + Y+ L A I Sbjct: 202 ESRYGLHVVNIARKIEGKPLEYSMVYDKVRGYLVHRASHLAIQAYIHNLVQKADI 256 >gi|21244891|ref|NP_644473.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas axonopodis pv. citri str. 306] gi|21110602|gb|AAM39009.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas axonopodis pv. citri str. 306] Length = 320 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 20/191 (10%), Positives = 48/191 (25%), Gaps = 12/191 (6%) Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 Q + A +I V+ +I A + +L + Sbjct: 119 QDDPVVAARIRQATDAILAKAVQTRARESAQIDAAQIKAQFDAHPHDYDEVHLSHVFVAL 178 Query: 187 IPDNKLQ-----NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKA-QYLLE 239 P + + R + ++ + + G+ L Sbjct: 179 KPQGEARRGTPLTDAQALARAQRLKQQLESGTPFAELAMRQSDDASTAAEGGELSPMFLR 238 Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 + + + + P +G I + +R + A Q ++ Sbjct: 239 NVADAFVAPVQDLAVGQVSVPVRGPEGYHLIRVDARRPATLDSA-----RGQIEVQLRDQ 293 Query: 300 HEAEYVKKLRS 310 A +++LR Sbjct: 294 AAANALEQLRQ 304 >gi|227325836|ref|ZP_03829860.1| peptidyl-prolyl cis-trans isomerase C [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 93 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 23/78 (29%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 ++ D + +K ++ + G + D+ P F + + Sbjct: 13 DTEQEANDILAQLEKGADFQKLAQKHSTCPSKRNGGDLGEFRKGDMVPAFDKAVFSCELL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 73 KPFGPVKTQFGYHVIKVL 90 >gi|209921249|ref|YP_002295333.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli SE11] gi|209914508|dbj|BAG79582.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli SE11] Length = 93 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 21/78 (26%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + Sbjct: 13 KEEKLALDLLEQIKNGANFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 T P TQ G I + Sbjct: 73 EPTGPLHTQFGYHIIKVL 90 >gi|222055935|ref|YP_002538297.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. FRC-32] gi|221565224|gb|ACM21196.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. FRC-32] Length = 92 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 22/80 (27%), Gaps = 1/80 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 ++ + + ++ + G + + P+F ++ N Sbjct: 12 DTEEECLKLKTEIENGADFAETAKLNSACPSRMRGGDLGTFAQGQMVPEFDQVVFSGDLN 71 Query: 256 NTTNPYVTQKGVEYIAICDK 275 P T G I I + Sbjct: 72 KVLGPVKTDFGYHLIEITKR 91 >gi|332293063|ref|YP_004431672.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Krokinobacter diaphorus 4H-3-7-5] gi|332171149|gb|AEE20404.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Krokinobacter diaphorus 4H-3-7-5] Length = 647 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 34/289 (11%), Positives = 78/289 (26%), Gaps = 44/289 (15%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKINGELEKIAVQEL 80 + ++ + + I TIN EVI + ++ +++ + ++ Sbjct: 4 LFLLLIFLCGFSFAHAQKDILLTINNEVIDSEEFTRVYEKNSELIKEDESNAPEDYLKLF 63 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I LK QE + G+ + + A+ D Sbjct: 64 IDYKLKVQEAYRLGLNNKKSYQDELSAYRAQLAKNYLNDVK------------------- 104 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + ++VK + L ++ PD + + Sbjct: 105 --VTEELVKEAYDRTVNELNA------------------RHILVRVSPDASPSDTLVAYR 144 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL-LKKSQNNTT 258 I A E + + + G + + F+N + N + Sbjct: 145 NITQARERIINGENFEKVARAISEDPSAKKNGGNLGWFKAFKMVYPFENAAYNTAINEVS 204 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 P+ T G + R G++ + A++ E + + Sbjct: 205 KPFRTSFGYHIVQPIAARKSKGKVQV-AHIMVALNQNDSTIIPEERINE 252 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 27/272 (9%), Positives = 75/272 (27%), Gaps = 16/272 (5%) Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 L K+ EL K A + E + + + + + + Sbjct: 96 AKNYLNDVKVTEELVKEAYDRTVNELNARHILVRVSPDASPSDTLVAYRNITQARERIIN 155 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + + I ++ + W K + + I + + Sbjct: 156 GENFEKVARAISEDPSAKKNGGNLGWFKAFKMVYPFENAAYNTAINEVSKPFRTSFGYHI 215 Query: 179 LI-----------RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-I 226 + + + N+ + ++RI + + + ++ Sbjct: 216 VQPIAARKSKGKVQVAHIMVALNQNDSTIIPEERINEVSKLLSQGASFETVALNYSDDRA 275 Query: 227 HDVSIGKAQYLLESDLHP---QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 GK + + L + ++ + P+ T+ G I + K + + Sbjct: 276 SYKKGGKLEEFEQGQLSSAAFEKTAFSLENIGAISQPFKTEFGWHIIKLLSKTPVPTYLD 335 Query: 284 LKAYLSAQNTPTKIEKHEAEYVK-KLRSNAII 314 + L+ + T + + + KLR+ + Sbjct: 336 ARVALTNKVTRDARAQVISNKLDSKLRNRYNV 367 >gi|253690377|ref|YP_003019567.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756955|gb|ACT15031.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 93 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +++ D + +K ++ + G + D+ P F + + Sbjct: 13 DTEQQANDILAQLEKGADFQKLAQKHSTCPSKRNGGDLGEFRKGDMVPAFDKAVFSCELL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 73 KPFGPVKTQFGYHVIKVL 90 >gi|289670755|ref|ZP_06491830.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 252 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 20/191 (10%), Positives = 49/191 (25%), Gaps = 12/191 (6%) Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 Q + A +I V+ +I A + +L + Sbjct: 51 QDDPVVAARIRQATDAILAKAVQTRARESARIDASQIKAQFDAHPHDYDEVHLSHLFVAL 110 Query: 187 IPDNKLQ-----NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKA-QYLLE 239 P + + R + ++ + + G+ L Sbjct: 111 KPQGEARRGTPLTDAQALARAQRLKQQLESGTPFAELAMRESDDGSTAAEGGELSPIFLR 170 Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 + + + + P +G I + +R + A Q ++ Sbjct: 171 NVADAFVAPVQDLAVGQVSAPVRGPEGYHLIRVDARRPATLDSA-----RGQIEVQLRDQ 225 Query: 300 HEAEYVKKLRS 310 A+ +++LR Sbjct: 226 AAADALEQLRQ 236 >gi|158429497|pdb|2PV1|A Chain A, Crystallographic Structure Of Sura First Peptidyl-Prolyl Isomerase Domain Complexed With Peptide Weyipnv gi|158429499|pdb|2PV2|A Chain A, Crystallographic Structure Of Sura First Peptidyl-Prolyl Isomerase Domain Complexed With Peptide Nftlkfwdifrk gi|158429500|pdb|2PV2|B Chain B, Crystallographic Structure Of Sura First Peptidyl-Prolyl Isomerase Domain Complexed With Peptide Nftlkfwdifrk gi|158429501|pdb|2PV2|C Chain C, Crystallographic Structure Of Sura First Peptidyl-Prolyl Isomerase Domain Complexed With Peptide Nftlkfwdifrk gi|158429502|pdb|2PV2|D Chain D, Crystallographic Structure Of Sura First Peptidyl-Prolyl Isomerase Domain Complexed With Peptide Nftlkfwdifrk Length = 103 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 7/97 (7%), Positives = 26/97 (26%), Gaps = 1/97 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 ++ + + + + + ++ ++ G+ + Sbjct: 7 HILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQ 66 Query: 241 DLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276 +L F + + P + G + + D R Sbjct: 67 ELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLR 103 >gi|126653292|ref|ZP_01725403.1| hypothetical protein BB14905_08958 [Bacillus sp. B14905] gi|126589966|gb|EAZ84095.1| hypothetical protein BB14905_08958 [Bacillus sp. B14905] Length = 323 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/303 (9%), Positives = 79/303 (26%), Gaps = 36/303 (11%) Query: 6 FTSLSDFIKLLTTYFV--LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63 + ++ + ++ F I + S I+G+VIT + + Sbjct: 24 RLKTKPALSVIAVLLLGNILWFIAWAIPNKSQEIGSDEQVAAIDGDVITRQEWMIAM--- 80 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 K +Q L+ E++ ++ + I ++ Sbjct: 81 -----EERYGKETLQNLVNESVMEKAAKTYKIKVTDQEIDLELALMRS------AQDKFD 129 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 Q + +Q + Q I V+ D + +E + + T Y + Sbjct: 130 TAMQNLSAEQLRQKIRSQLILDKVLTKDVV--ISEESIEKYYEENQGLYNTKTSYRTNFI 187 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESD- 241 +K +A + + G +L E+ Sbjct: 188 E-----------VDAKKAADEALGELKNGSDFSVLAREISLDSASASLGGDVGFLTENQE 236 Query: 242 --LHPQFQNLLKKSQNNTTNPYVTQKGVE-YIAICDKRDLGGE--IALKAYLSAQNTPTK 296 + N + + G + + + + +K ++ + + Sbjct: 237 NVDPAIINAVKSTKANEVSKAFKLDNGHYGIVQVQEVLEGQSFTYDDVKEHIERELALEQ 296 Query: 297 IEK 299 + + Sbjct: 297 LPQ 299 >gi|254456904|ref|ZP_05070332.1| peptidyl-prolyl cis-trans isomerase [Campylobacterales bacterium GD 1] gi|207085696|gb|EDZ62980.1| peptidyl-prolyl cis-trans isomerase [Campylobacterales bacterium GD 1] Length = 92 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 7/80 (8%), Positives = 19/80 (23%), Gaps = 1/80 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 + + + + + G + P+F + + Sbjct: 12 ASEDECNTLKAEIENGASFESVAQAHSQCPSGAQGGDLGQFGPGQMVPEFDKAVFSGDVG 71 Query: 256 NTTNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 72 VLYGPIQTQFGYHLLEVTSR 91 >gi|313201571|ref|YP_004040229.1| EpsD family peptidyl-prolyl cis-trans isomerase [Methylovorus sp. MP688] gi|312440887|gb|ADQ84993.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Methylovorus sp. MP688] Length = 276 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 22/277 (7%), Positives = 69/277 (24%), Gaps = 42/277 (15%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100 ++G+ I+ +++ I + + ++ K + +LI + + + I ++ Sbjct: 2 IAKVDGKEISLLQLNQAIKNVPNVNSSNVDQVRKQLLDKLIDQQIVLNVALEQKIDRSAD 61 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 V + + I + N + Sbjct: 62 VVASI------------------------------EAAKREIIARAYLTNLVTSRIKPTP 91 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 ++ + + S+P + K + ++ Sbjct: 92 QQVKQYFDTHPELFSERKVYNLQDISLPAETEISPALTDKVNSSKSLQDIAEWLKTQNVK 151 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG- 279 AS + + LK ++ + + + + Sbjct: 152 FGASSYSK---------PAEQMPLDALSTLKSMRDGSVSLLTMDGSHHIVRLVAAVSAPM 202 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + ++ +K + +L+ A + Y Sbjct: 203 SYEQAKPMIQMYLVNSEGQKLIKSEITRLKEKAKVEY 239 >gi|186472670|ref|YP_001860012.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia phymatum STM815] gi|184195002|gb|ACC72966.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia phymatum STM815] Length = 250 Score = 60.8 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 73/268 (27%), Gaps = 26/268 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 I+ EV+ D+ + I LLKL L +++++ + L +K G+T Sbjct: 4 IVRIDDEVV---DVGEFIRLLKLTGQFESL----IEQMVRDKLAVHAAKKHGVTVS---- 52 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + A + Q + I + + + + + E Sbjct: 53 ADEIQERADQFRRVRGLHRAADMNQYLDTLKISLDDFEAFITDGLFQEKMLDQV-GSDSE 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + +L K + R + Sbjct: 112 IEEYFSMNSPKFDALEVSHILLDDEG-----------KAKEMISYLREDPDAFAEMAREH 160 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKG--VEYIAICDKRDLG 279 + S G +L L P + + + + P+ + E A+ K Sbjct: 161 SIADTKDSGGVIGKVLRGSLKPDIEAKIFNAGVGDLLGPFASPDRSCFEIFAVTAKYPAQ 220 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + + + + E++ + Sbjct: 221 LDADVASEIKRLLREQWLMARAQEHIIE 248 >gi|255639387|gb|ACU19989.1| unknown [Glycine max] Length = 146 Score = 60.8 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 28/103 (27%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R +L + + + ++ + ++++ G Sbjct: 45 TYVEARRILCEKQGKINETYKKL-QDGWLGNGDKVPPAEFAKVAQEYSECPSGKKGGDLG 103 Query: 236 YLLESDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + P + T+ P+ + G I +++ Sbjct: 104 WFPRGRMAGPFQEVAFNTPVGATSAPFKSTHGYHIILSEGRKN 146 >gi|119898534|ref|YP_933747.1| hypothetical protein azo2243 [Azoarcus sp. BH72] gi|119670947|emb|CAL94860.1| conserved hypothetical secreted protein [Azoarcus sp. BH72] Length = 299 Score = 60.8 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 26/287 (9%), Positives = 68/287 (23%), Gaps = 42/287 (14%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEI 90 + +N I+ + + I + + ++ LI E Sbjct: 23 GARSGSDEAVAARVNDRAISVSQVDQAIPRDEPMSADDIARARSAVLESLIDE------- 75 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 + N + + + + Q Sbjct: 76 --------------ELMVQKANARRLDLEPRVSEELEAARRRILARAYLEQVTA------ 115 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + + R Y +L+ + R +D+ Sbjct: 116 -VDPRPDDEAVSAFYRSHPALFAERRIYSFHEFNIQARPERLEALRALAVRERDSAAIAA 174 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 L ++ + + L + N + ++ T G E + Sbjct: 175 TLEREGLSFAARVAVLPA-----------EQLPFERLNAFSRLKDGDNLLTPTPYGAELV 223 Query: 271 AI-CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + +R E + + + + + + ++LR +A I Y Sbjct: 224 HLASSRRQPLDEASARPVIEQFLRNRERVELARDEARRLRKSAEIEY 270 >gi|148284256|ref|YP_001248346.1| hypothetical protein OTBS_0439 [Orientia tsutsugamushi str. Boryong] gi|146739695|emb|CAM79505.1| conserved hypothetical protein [Orientia tsutsugamushi str. Boryong] Length = 291 Score = 60.8 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 36/315 (11%), Positives = 92/315 (29%), Gaps = 35/315 (11%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 + + T+F+ II + + +I ++G IT + K ++ + Sbjct: 1 MNKILTFFLTIIVVCNSSGALAAT----KIVAIVDGTPITSHQLDKFGKVITFLHRSQSL 56 Query: 71 ------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 EL IA++ LI + E ++ GI + +N F + L + F + Sbjct: 57 TSISDSELTTIALEALIDRVIFLNEAKRYGIEASQDEINQFIAMEEKAINLPDQYFKYAI 116 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + + + F + ++ I + + N+ + + + + Sbjct: 117 KEAEVSYDAFMMFYEVRVIISKINRMLAKSTNRNIVDLLLLSTKPTEVKF---------- 166 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLH 243 L +++A+ + D Sbjct: 167 -------LVASSTNTSNNYKKLLVLRSKISCNVDAKEYANLAEVKCITKDLNDINTHDRV 219 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVE-YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 L +N+++ + + + +C + L + ++ Sbjct: 220 ----ILESMKENSSSRIIESDNNILKFFHLCSREVKNVTEQEHNDLVNKVFSNQVNMELN 275 Query: 303 EYVKKLRSNAIIHYY 317 ++ KL A I + Sbjct: 276 KFRNKLLGRAYIKVF 290 >gi|255067238|ref|ZP_05319093.1| conserved hypothetical protein [Neisseria sicca ATCC 29256] gi|255048606|gb|EET44070.1| conserved hypothetical protein [Neisseria sicca ATCC 29256] Length = 287 Score = 60.8 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 33/300 (11%), Positives = 92/300 (30%), Gaps = 27/300 (9%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET 84 + + + S ++S++ T+NG+ I I ++A L+ +EL Sbjct: 6 LISMLMTALVSGSLSAQTLVTVNGQTIDSSVIDAQVAALRAANNKIPDSPELRRELTERQ 65 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 + + + + F + + + F+ L Q+ Sbjct: 66 VINTVVSQEAKRLKLDQSAEFKQALEHARTDAKKQGADKKAHFKTEWAAFESDLLGQAYA 125 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 V++ +++ + +E + ++ + + + + Sbjct: 126 IHVLRQ---NPVQEKDVKTAYDNFSNFYKGTQEVQLGEIITRTQADAQKAISDLNAK--- 179 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKA--QYLLESDL----HPQFQNLLKKSQN-NT 257 + L++++ G Y+ DL P + + + +T Sbjct: 180 --------KSFASVLKQYSIDERAKQAGGIQQGYVPLKDLQEAVPPLYAAVKDLKKGAHT 231 Query: 258 TNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T P + D+RD+ K+ ++ +++++ ++K A I Sbjct: 232 TTPLQDSDVYAVFYVNDRRDVKLPSYDESKSSIAQDLQASRVDEALQSLLQK----ATIK 287 >gi|77920470|ref|YP_358285.1| peptidyl-prolyl cis-trans isomerase activity [Pelobacter carbinolicus DSM 2380] gi|77546553|gb|ABA90115.1| peptidyl-prolyl cis-trans isomerase activity [Pelobacter carbinolicus DSM 2380] Length = 93 Score = 60.8 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 8/79 (10%), Positives = 20/79 (25%), Gaps = 1/79 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 ++ ++ +++ G + +F + + Sbjct: 13 TEEECLSLKKRIEAGETFAAIAGQYSKCPSGRQGGALGEFRPGQMVKEFDEVVFSGEIGK 72 Query: 257 TTNPYVTQKGVEYIAICDK 275 P TQ G I I + Sbjct: 73 VLGPVKTQFGYHLIEILSR 91 >gi|237806951|ref|YP_002891391.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Tolumonas auensis DSM 9187] gi|237499212|gb|ACQ91805.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Tolumonas auensis DSM 9187] Length = 93 Score = 60.8 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 10/78 (12%), Positives = 22/78 (28%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQN 255 + + D + +K+++ G + D+ F N + Sbjct: 13 KTEAQALDIMKQLAAGADFQQLAKKYSTCPSKKRGGDLGEFKKGDMVASFDNAVFSCELL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 P T+ G I + Sbjct: 73 QPVGPVKTRFGYHIIKVL 90 >gi|218885414|ref|YP_002434735.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756368|gb|ACL07267.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 94 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 19/80 (23%), Gaps = 1/80 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 + + + L + G + P+F + + Sbjct: 12 DTEDACNELKARILAGEDFAEVARAHSKCPSGRRGGDLGEFPRGAMVPEFDEVVFTGEVG 71 Query: 256 NTTNPYVTQKGVEYIAICDK 275 P TQ G I + + Sbjct: 72 TVLGPVRTQFGHHLIEVTAR 91 >gi|317014080|gb|ADU81516.1| hypothetical protein HPGAM_03410 [Helicobacter pylori Gambia94/24] Length = 415 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 85/290 (29%), Gaps = 35/290 (12%) Query: 32 SYKSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 + + + ++ +NG IT I + Q+ + + A LI E +K Sbjct: 149 NATNNTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKN 202 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 QEIE+ I D + ++ A+ G+ + F L +G ++ L ++ Sbjct: 203 QEIERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQEL 261 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 ++N + E + K+ ++ Sbjct: 262 LRNILLTNVDTSS-ETKMREYYNKHKEQFSIPTEIETVRYTSTNQEDLERAMADPNLEVP 320 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 + + +++ Q + Q + T G Sbjct: 321 GVSKANEKIE--------------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQ 360 Query: 268 EY---IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I ++ K +++ + +K E+ +KLR + I Sbjct: 361 FITFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 410 >gi|325283666|ref|YP_004256207.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus proteolyticus MRP] gi|324315475|gb|ADY26590.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus proteolyticus MRP] Length = 349 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 22/267 (8%), Positives = 58/267 (21%), Gaps = 24/267 (8%) Query: 35 SWAMSSRIRTTINGEV----ITDGDISKRIALLK---LQKINGELEKIAVQELIVETLKK 87 S + + I +T D + L L + L + + Sbjct: 41 SGQPENDLLAIIGSGPGALRVTRADFDRAFRLAVGEVLNRQGLPLRDDLLTSFAPSRSQF 100 Query: 88 QEIEKSGITFDSNTVNYFFVQHAR----NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 E + + S + D + + Sbjct: 101 FEQFIHDKQVEYLARQALPEFTYQGPPRIGVHSFAQPQGYADYLTGAGYRDEADYLSEMA 160 Query: 144 WPDVV---KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 ++ +++ ++ + + + ++ V+ + V Sbjct: 161 RRALLDAYRSELRTRFTFSDAAVESYYALNRHSFVQREEACARHILVTSEVQARDLRVA- 219 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 L + G+ L + F+ L + T Sbjct: 220 --------LLAGADFALLARSQSRDPGSASRGGELGCLAPGETVAAFEATLFGAALGTPQ 271 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKA 286 T G + + ++ G +A Sbjct: 272 VVQTDHGWHVVEVTERHAAGVIPPEQA 298 >gi|309775740|ref|ZP_07670736.1| putative foldase protein PrsA [Erysipelotrichaceae bacterium 3_1_53] gi|308916503|gb|EFP62247.1| putative foldase protein PrsA [Erysipelotrichaceae bacterium 3_1_53] Length = 332 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 39/325 (12%), Positives = 88/325 (27%), Gaps = 28/325 (8%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVS----------YKSWAMSSRIRTTINGEVITDGDISK 58 + K + +IF I S KS + IT ++ Sbjct: 2 IKILKKQWFVVLIALIFIGFAIFSVYDTNKGKLPGKSVDGKDVVAGLKGDVNITADEL-- 59 Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 L L E+I +++K + K + + A ++G A+ Sbjct: 60 -YKNLNKTYGKSMLFMKFQAEVIDKSVKTSDELKKTAETYESNIKQSAQSQASSSGADAD 118 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + Q + + + ++ND++ K+ + Sbjct: 119 ALIAQNIAQYGFTSDQLYEYCMTVAKMEKLQNDYIDKH-------LDELFTPIYKEKKSR 171 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 + +L + D K + ++K E++ + + +K++ G Y+ Sbjct: 172 TVSHILIKMEDAKNPTKKELEKVQ-KVEDALKKGDSFADVAKKYSDDSSASDGGYLGYMD 230 Query: 239 ESD--LHPQFQNLLKKSQNNTTNPYVTQ----KGVEYIAICDKRDLGGEIALK-AYLSAQ 291 + K T++ G I + + E K + Sbjct: 231 SDTSYVDSFKNAAFKLKAGETSDWVKESNDNYNGWHLIRVEETDKAKLEKDKKAKESLYK 290 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHY 316 + Y+ + I Y Sbjct: 291 AIANGTQNLSNTYLWEAAKKLDIKY 315 >gi|213418227|ref|ZP_03351293.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 86 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 2/83 (2%) Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNT 293 + P F++ L K + P + G I + D R + + A K Sbjct: 1 WATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLIELLDTRKVDKTDAAQKDRAYRMLM 60 Query: 294 PTKIEKHEAEYVKKLRSNAIIHY 316 K + A ++++ R++A + Sbjct: 61 NRKFSEEAATWMQEQRASAYVKI 83 >gi|209809291|ref|YP_002264829.1| peptidyl-prolyl cis-trans isomerase C [Aliivibrio salmonicida LFI1238] gi|208010853|emb|CAQ81253.1| peptidyl-prolyl cis-trans isomerase C [Aliivibrio salmonicida LFI1238] Length = 92 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 27/75 (36%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + + K +K++S G + + PQF + + Sbjct: 15 KEQAEDIIKQLNKGAKFHVLAKKYSSCPSGKKGGDLGEFKKGQMVPQFDKVCFSGETLVP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G I + Sbjct: 75 HLVKTKFGWHVIKVL 89 >gi|49073566|gb|AAT49329.1| PA4176 [synthetic construct] Length = 94 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 25/80 (31%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 + + + + + + +S G + +F ++ + N Sbjct: 14 EAKCNELKTAIEGGADFAEVAREHSSCPSGRDGGNLGSFGPGQMVREFDQVVFSAPLNVV 73 Query: 259 -NPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|15599371|ref|NP_252865.1| peptidyl-prolyl cis-trans isomerase C2 [Pseudomonas aeruginosa PAO1] gi|218889495|ref|YP_002438359.1| peptidyl-prolyl cis-trans isomerase C2 [Pseudomonas aeruginosa LESB58] gi|254237056|ref|ZP_04930379.1| peptidyl-prolyl cis-trans isomerase C2 [Pseudomonas aeruginosa C3719] gi|254242860|ref|ZP_04936182.1| peptidyl-prolyl cis-trans isomerase C2 [Pseudomonas aeruginosa 2192] gi|9950385|gb|AAG07563.1|AE004834_3 peptidyl-prolyl cis-trans isomerase C2 [Pseudomonas aeruginosa PAO1] gi|126168987|gb|EAZ54498.1| peptidyl-prolyl cis-trans isomerase C2 [Pseudomonas aeruginosa C3719] gi|126196238|gb|EAZ60301.1| peptidyl-prolyl cis-trans isomerase C2 [Pseudomonas aeruginosa 2192] gi|218769718|emb|CAW25478.1| peptidyl-prolyl cis-trans isomerase C2 [Pseudomonas aeruginosa LESB58] Length = 93 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 25/80 (31%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 + + + + + + +S G + +F ++ + N Sbjct: 14 EAKCNELKTAIEGGADFAEVAREHSSCPSGRDGGNLGSFGPGQMVREFDQVVFSAPLNVV 73 Query: 259 -NPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|284043450|ref|YP_003393790.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Conexibacter woesei DSM 14684] gi|283947671|gb|ADB50415.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Conexibacter woesei DSM 14684] Length = 379 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 25/255 (9%), Positives = 53/255 (20%), Gaps = 18/255 (7%) Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 T+ + + L + L +V +L+ E E+ GI V Sbjct: 98 TESQLVAQCRQL-----DEALRNRSVAQLVQMVWLDGETERLGIEVTDADVERAKRATFP 152 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 G + + + L + + ++ + EI A + + Sbjct: 153 RAGDMQRTLRQLG----MTERDVEFQLRFNQLSTRLTEHLQRRPVDVGDAEISAYYARNR 208 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 L N A + R + Sbjct: 209 EQFAVPERRDLELILTRTETQANDAKRAVEGGTAWAAAARRWSTDELSK-------GNGG 261 Query: 232 GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK--AYLS 289 + P Q G + + + A + Sbjct: 262 RLLGVARGQQDRALDAAAFDARRGVLLGPVRGQFGWYLVRVTRVTPSKQSTLAESSAQIR 321 Query: 290 AQNTPTKIEKHEAEY 304 + ++ EY Sbjct: 322 ELVRQQESQRAMQEY 336 >gi|208434581|ref|YP_002266247.1| hypothetical protein HPG27_621 [Helicobacter pylori G27] gi|208432510|gb|ACI27381.1| hypothetical protein HPG27_621 [Helicobacter pylori G27] Length = 415 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 39/290 (13%), Positives = 85/290 (29%), Gaps = 35/290 (12%) Query: 32 SYKSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 + + + ++ +NG IT I + QK + + A LI E +K Sbjct: 149 NAANNTLEDKVVGGISLLVNGSPITLYQIQEE------QKKSKVSKAQARDRLIAERIKN 202 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 QEIE+ I D + ++ A+ G+ + F L +G ++ L ++ Sbjct: 203 QEIERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQEL 261 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 ++N + E + K+ ++ Sbjct: 262 LRNILLTNVDTSS-ETKMREYYNKHKEQFSIPTEIETVRYTSTSQEDLERAMADPNLEIP 320 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 + + +++ Q + Q + T G Sbjct: 321 GVSKANEKIE--------------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQ 360 Query: 268 EY---IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I ++ K +++ + +K E+ +KLR + I Sbjct: 361 FITFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 410 >gi|88857682|ref|ZP_01132325.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Pseudoalteromonas tunicata D2] gi|88820879|gb|EAR30691.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Pseudoalteromonas tunicata D2] Length = 92 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 25/75 (33%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ D + K +KF+S + G + PQF ++ + Sbjct: 15 KEQADDIIAQLKKGAKFQTLAKKFSSCPSGKNGGDLGEFKRGQMVPQFDKVVFSCEVLEP 74 Query: 259 NPYVTQKGVEYIAIC 273 T+ G I + Sbjct: 75 QLVKTRFGWHVIKVL 89 >gi|308061989|gb|ADO03877.1| hypothetical protein HPCU_03575 [Helicobacter pylori Cuz20] Length = 403 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 83/288 (28%), Gaps = 35/288 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 139 AGSTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 192 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 193 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 251 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + E + K+ ++ Sbjct: 252 NILLTNVDTSS-ETKMREYYNKHKEQFSIPTEIETVRYTSTNQEDLERAMADPNLEIPGV 310 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 + + +++ Q + Q + T G Sbjct: 311 SKANEKIE--------------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQFI 350 Query: 270 ---IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I ++ K +++ + +K E+ +KLR + I Sbjct: 351 TFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 398 >gi|119491393|ref|ZP_01623412.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lyngbya sp. PCC 8106] gi|119453388|gb|EAW34551.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lyngbya sp. PCC 8106] Length = 253 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 23/271 (8%), Positives = 71/271 (26%), Gaps = 27/271 (9%) Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 T+N E IT + + + L+ +++ +++ +++ ++ Sbjct: 7 TVNDEPIT---LGQSLRYLQSSGKLQSFIGEMLRQYVLDKEL--AAQENLNINSASVEQA 61 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + F +L++ + + F Q + + + + E Sbjct: 62 VINFRLERNLSDPQAFQEWLERNQMSYDSFHQQVEAGFKRETLKLSIVQPQLEAYFQERK 121 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + + + + + + +E R + +++ Sbjct: 122 SFLDT---------------IILSRIVVADYELAETLHRRLQEEEARFEQ---LAREYSL 163 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 G + L + ++ + P + + + E Sbjct: 164 TPERNVNGMMGAVSLGSLPENLKPIMTVATLGQIVGPVEIEGRWCIFRVEQLIEASFEDP 223 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 L + E+ E +K L I Sbjct: 224 K---LKQKLQNELFERWINEKLKSLTVKMQI 251 >gi|119471814|ref|ZP_01614147.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Alteromonadales bacterium TW-7] gi|119445304|gb|EAW26593.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Alteromonadales bacterium TW-7] Length = 93 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 24/80 (30%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 + + D + + + ++ G + P+F + + N Sbjct: 14 EAQCLDLKTKIEQGEDFAELAKVHSNCPSGQDGGALGEFGPGMMVPEFDKVVFSAPINQV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + + + + Sbjct: 74 QGPVQTQFGYHLLEVTSRSE 93 >gi|225075434|ref|ZP_03718633.1| hypothetical protein NEIFLAOT_00439 [Neisseria flavescens NRL30031/H210] gi|224953252|gb|EEG34461.1| hypothetical protein NEIFLAOT_00439 [Neisseria flavescens NRL30031/H210] Length = 290 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 31/304 (10%), Positives = 82/304 (26%), Gaps = 20/304 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + TYF + + + + T+NG+ I I ++A ++ N + Sbjct: 1 MKKTYFTSALMLALTSGTLFAQT-----LATVNGQAIDSSVIDDQVASVRASNPNVQDTP 55 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 Q L + + + + F + +A+ + F Sbjct: 56 ELRQMLTERQVISTVVTQEAKKLKLDQSAEFKTALEQARADAAKQGADKKATFKTEWAVF 115 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + L Q+ +V+ +++ N +E + ++ N + Sbjct: 116 ENDLLGQAFAAHIVRQ---YPVQEKDVKAAYNDFSNFYKGTQEVQLGEIVTDSSSNAQKA 172 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 + + + D + V + + P + + + Sbjct: 173 IADLDAKKS-FVSVLNQYSIDEAAKKAGGIPKAYVPLKDL----QESAPPLYAAVKDLKK 227 Query: 255 NNTTN-PYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 T P + D+R+ + K + + +++ + Sbjct: 228 GAHTKTPLQNGNLYAVFYVNDRRNVTVPSYETAKNEIGSDLQAARVDAAIQSLL----KK 283 Query: 312 AIIH 315 A I Sbjct: 284 ASIK 287 >gi|189182933|ref|YP_001936718.1| hypothetical protein OTT_0026 [Orientia tsutsugamushi str. Ikeda] gi|189179704|dbj|BAG39484.1| hypothetical protein OTT_0026 [Orientia tsutsugamushi str. Ikeda] Length = 291 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 35/315 (11%), Positives = 91/315 (28%), Gaps = 35/315 (11%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 + + +F+ II + + +I ++G IT + K ++ + Sbjct: 1 MNKILAFFLTIIVVCNSSGALAAT----KIVAIVDGTPITSHQLDKFRKVITFLHRSQSL 56 Query: 71 ------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 EL IA++ LI + E ++ GI + +N F + L + F + Sbjct: 57 TSISDSELTTIALEALIDRVIFLNEAKRYGIEASQDEINQFIAMEEKAINLPDQYFKYAI 116 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + + + F + ++ I + + N+ + + + + Sbjct: 117 KESEVSYDAFLMFYEVRVIISKINRMLAKSTNRNIVDLLLLSTKPTEVKF---------- 166 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLH 243 L +++A+ + D Sbjct: 167 -------LVASNTNTSNNYKKMLVLRSKISCNVDAKEYANLAEVKCITKDLNDVNTHDRV 219 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVE-YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 L +N+++ + + + +C + L + ++ Sbjct: 220 ----ILESMKENSSSRIIESDNNILKFFHLCSREVKNVTEQEHNDLVNKVFSNQVNMELN 275 Query: 303 EYVKKLRSNAIIHYY 317 ++ KL A I + Sbjct: 276 KFRNKLLGRAYIKVF 290 >gi|114048893|ref|YP_739443.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-7] gi|117919077|ref|YP_868269.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. ANA-3] gi|113890335|gb|ABI44386.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-7] gi|117611409|gb|ABK46863.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. ANA-3] Length = 92 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 8/75 (10%), Positives = 25/75 (33%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + + ++++S G + PQF + + Sbjct: 15 KEQAEDIIKQLNKGANFGALAKRYSSCPSAKKGGDLGEFKRGQMVPQFDKVAFSGELLVP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G + + Sbjct: 75 HLVKTKFGWHVVKVL 89 >gi|315125622|ref|YP_004067625.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Pseudoalteromonas sp. SM9913] gi|315014135|gb|ADT67473.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Pseudoalteromonas sp. SM9913] Length = 93 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 26/80 (32%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 + + D ++ + + ++ G + P+F ++ + N Sbjct: 14 EAQCLDLKDKIEQGEDFAELAKLHSNCPSGQDGGALGEFGPGMMVPEFDKVVFSAPLNQV 73 Query: 258 TNPYVTQKGVEYIAICDKRD 277 P TQ G + I + + Sbjct: 74 QGPVQTQFGYHLLEITSRSE 93 >gi|90414390|ref|ZP_01222367.1| putative peptidyl-prolyl cis-trans isomerase C [Photobacterium profundum 3TCK] gi|90324503|gb|EAS41059.1| putative peptidyl-prolyl cis-trans isomerase C [Photobacterium profundum 3TCK] Length = 92 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 4/77 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 Q++ +D E + K +K+++ S G + + PQF + Sbjct: 15 QEKAEDIIEQLKKGAKFQTLAKKYSNCPSGKSGGDLGEFRKGQMVPQFDKV--CFTGELL 72 Query: 259 NP--YVTQKGVEYIAIC 273 P T+ G + + Sbjct: 73 TPHLVKTKFGWHIVKVL 89 >gi|299470956|emb|CBN79940.1| peptidyl prolyl cis/trans isomerase like [Ectocarpus siliculosus] Length = 308 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 24/88 (27%), Gaps = 1/88 (1%) Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVE 268 + + +S G + + + +F+ ++ T TQ G Sbjct: 118 IKSGEQFGDVATDMSSCPSKDKGGDLGWFKKGQMVAEFEAACFENDPGTIVKVQTQFGWH 177 Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTK 296 +A+ R + L K Sbjct: 178 VVALLS-RAILPRQMAVEELGEILELAK 204 >gi|320163725|gb|EFW40624.1| NIMA-interacting 1 [Capsaspora owczarzaki ATCC 30864] Length = 191 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 12/158 (7%), Positives = 32/158 (20%), Gaps = 3/158 (1%) Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 G ++ K ++ + N + Sbjct: 32 GWEIRHSATKKRAYYFHVPTQKSQWEPPALNSNAEDESESNDASNSSTMSQVRASHILAK 91 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 R + + + + + + + + + S G Sbjct: 92 HKDSR--RPSSWKTQNITRSRDEALAMIQQWRAQIVNKEKTFADIAKVESDCSSAKSGGD 149 Query: 234 AQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + + F++ + P T GV I Sbjct: 150 LGFFGPGQMQAPFEHATFALQVGELSEPVFTDSGVHII 187 >gi|88860987|ref|ZP_01135622.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Pseudoalteromonas tunicata D2] gi|88816915|gb|EAR26735.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Pseudoalteromonas tunicata D2] Length = 92 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 8/78 (10%), Positives = 26/78 (33%), Gaps = 1/78 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 ++ + ++ + ++ + G+ + P+F ++ + N Sbjct: 14 EEHCLELKKQIESGADFAQVAKDHSTCPSGQAGGELGEFGPGMMVPEFDTVVFSAPVNTV 73 Query: 258 TNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 74 QGPVQTQFGYHLLEVTSR 91 >gi|268316847|ref|YP_003290566.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus DSM 4252] gi|262334381|gb|ACY48178.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus DSM 4252] Length = 684 Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 23/287 (8%), Positives = 69/287 (24%), Gaps = 44/287 (15%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEK 92 + A + + EVI + A + G + A L Sbjct: 22 QTNPAENPEVVAVAGSEVIDLTTFEDQYA-----RSVGNRLEAADDSL------------ 64 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 F++ N L ++ + + ++ +++ + Sbjct: 65 --------QAYQDFLERYVNYRLRVQEARARGYDRDSAIVAEASAYQLELARNHLMRQEV 116 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ-KRIKDAEESRLR 211 I + + I + +P + +R++ +S + Sbjct: 117 ----------IEPLLRTLYARMPDMVDISHIFVRVPTDATPEDTLAAYRRLQALIDSVRQ 166 Query: 212 LPKDCNKLEKFASKIHDVSI-------GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVT 263 + + S G ++ + + + + T Sbjct: 167 GADFNEIAFRHSDDPSARSPRSTRGGWGHIGWIKMGQTIEPMETYAFNTPVGELSPIFRT 226 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + G + + D++ ++ + + + LR Sbjct: 227 RYGYHVLKVHDRKPAPYDVRAAHIMITPAPTPEDSARVRRTLDSLRQ 273 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 11/152 (7%), Positives = 36/152 (23%), Gaps = 6/152 (3%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-H 227 + + ++ + + + + + + Sbjct: 236 HDRKPAPYDVRAAHIMITPAPTPEDSARVRRTLDSLRQLVLSGKADFAELARQHSEDWRT 295 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKK---SQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 G YL + P + ++ T G+ + D+R + Sbjct: 296 KSRGGDLGYLSFAQPMPVMVRDTLFALKEIGDVSHIVTTPFGLHIFQLKDRRPIPPTFEA 355 Query: 285 KAYLSAQNTPT--KIEKHEAEYVKKLRSNAII 314 ++++ +V +LR + Sbjct: 356 AYDTLLTVADRLGRLQEARNRFVAQLRRRLHV 387 >gi|210134866|ref|YP_002301305.1| hypothetical protein HPP12_0672 [Helicobacter pylori P12] gi|210132834|gb|ACJ07825.1| hypothetical protein HPP12_0672 [Helicobacter pylori P12] Length = 414 Score = 60.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 85/290 (29%), Gaps = 35/290 (12%) Query: 32 SYKSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 + + + ++ +NG IT I + Q+ + + A LI E +K Sbjct: 148 NAANNTLEDKVVGGISLLVNGSPITLYQIQEE------QERSKVSKAQARDRLIAERIKN 201 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 QEIE+ I D + ++ A+ G+ + F L +G ++ L ++ Sbjct: 202 QEIERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQEL 260 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 ++N + E + K+ ++ Sbjct: 261 LRNILLTNVDTSS-ETKMREYYNKHKEQFSIPTEIETVRYTSTNQEDLERAMADPNLEIP 319 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 + + +++ Q + Q + T G Sbjct: 320 GVSKANEKIE--------------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQ 359 Query: 268 EY---IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I ++ K +++ + +K E+ +KLR + I Sbjct: 360 FITFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 409 >gi|332285620|ref|YP_004417531.1| peptidyl-prolyl cis-trans isomerase C [Pusillimonas sp. T7-7] gi|330429573|gb|AEC20907.1| peptidyl-prolyl cis-trans isomerase C [Pusillimonas sp. T7-7] Length = 93 Score = 60.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 25/81 (30%), Gaps = 1/81 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257 + + + + + + +S G + +F ++ + N Sbjct: 13 TEDKCNELKTAIEGGADFAEVARENSSCPSSRDGGNLGTFGPGQMVKEFDEVVFSAPVNV 72 Query: 258 T-NPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 73 VQGPVKTQFGYHLVEVTSRQD 93 >gi|91200129|emb|CAJ73172.1| Strongly similar to peptidyl-prolyl cis-trans isomerase [Candidatus Kuenenia stuttgartiensis] Length = 92 Score = 60.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 24/79 (30%), Gaps = 1/79 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 Q+ +D + + ++++ G + +F Q + + Sbjct: 13 TQQECEDIKSKIQNGEEFATMAQQYSQCPSGKQGGDLGEFGPGQMVKEFDQVVFRDEVGK 72 Query: 257 TTNPYVTQKGVEYIAICDK 275 P TQ G I I + Sbjct: 73 VHGPICTQFGYHLIEITSR 91 >gi|327438069|dbj|BAK14434.1| parvulin-like peptidyl-prolyl isomerase [Solibacillus silvestris StLB046] Length = 324 Score = 60.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 27/286 (9%), Positives = 74/286 (25%), Gaps = 34/286 (11%) Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78 F +++ + + + G+ IT + K +Q Sbjct: 42 LFWFVLWLLPSDETTSEKEDGGEKIAAVEGDPITRQQWLAEM--------ENRYGKETLQ 93 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 L+ E + ++ EK + ++ + S +Q L Sbjct: 94 SLVNEAVMEKAAEKYKLDVKEEEIDLEIALLRSAQDSNDSTLHSLSPEQ----------L 143 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + ++ E E + K+I RT + + + + Sbjct: 144 RQKMRAQLILDKVLTNDIVVKENEAKKYYEDNKSIYNIPTTHRTSIIIVNSKEDAERVEK 203 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESD---LHPQFQNLLKKSQ 254 + + + + G ++ S + K + Sbjct: 204 ELK---------DGSDFAVLAREHSLDTASASLGGDIGFISSSQSAVDPAILPEVEKLKE 254 Query: 255 NNTTNPYVTQKG-VEYIAICDKRDLG--GEIALKAYLSAQNTPTKI 297 T+ P+V G + + + + ++ ++ Q ++ Sbjct: 255 KETSKPFVLSDGRYAIVKVTENMEGQSFSFDEVEGHVKRQLALEQL 300 >gi|269137453|ref|YP_003294153.1| parvulin-like peptidyl-prolyl isomerase [Edwardsiella tarda EIB202] gi|267983113|gb|ACY82942.1| parvulin-like peptidyl-prolyl isomerase [Edwardsiella tarda EIB202] gi|304557527|gb|ADM40191.1| parvulin-like peptidyl-prolyl isomerase [Edwardsiella tarda FL6-60] Length = 93 Score = 60.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 21/78 (26%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 Q + + R + + + G + + P+F + + Sbjct: 13 ESQAEAESLLQKLKRGAQFQTLARRHSRCPSKRQGGDLGEFTKGSMVPEFDRAVFSGPLL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 P T+ G I + Sbjct: 73 TPIGPIKTRFGYHIIKVL 90 >gi|117925439|ref|YP_866056.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Magnetococcus sp. MC-1] gi|117609195|gb|ABK44650.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Magnetococcus sp. MC-1] Length = 636 Score = 60.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 20/187 (10%), Positives = 51/187 (27%), Gaps = 6/187 (3%) Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV--REY 178 + Q + + ++ + + + E +I A K + Sbjct: 209 EALRAYQENNRDAYSIKQRVKVRYLLLDAESVRDELKVDEAKIIAYYDDNKPLYKTLESR 268 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 +R +L + QK+I+DA++ + + + G+ Sbjct: 269 KLRHILAKFKAGDATAKAAAQKKIEDAKQRIANGESFAEVAKLLSEDVTASQGGELGVFQ 328 Query: 239 E-SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTP 294 L +F+ + + + G I + G +K ++ Q Sbjct: 329 RGGGLVERFEEAAFTLPEGKVSEVVESPFGFHLILVDHIDPAGTRSFEQVKPEIAEQLFQ 388 Query: 295 TKIEKHE 301 + Sbjct: 389 EGAGEAI 395 >gi|290988271|ref|XP_002676845.1| predicted protein [Naegleria gruberi] gi|284090449|gb|EFC44101.1| predicted protein [Naegleria gruberi] Length = 113 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 8/99 (8%), Positives = 30/99 (30%), Gaps = 2/99 (2%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 +E R +L + + + + + ++ + E+++ G Sbjct: 16 KEVQARHILCEKMGKAEEVMKKL-QEGWLSRDVKVPSSEFGKLAEQYSDCSSKNKGGNLG 74 Query: 236 YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAIC 273 + + + F + + + T+ G + + Sbjct: 75 WFGRTKMVGPFSEVAFNTPVGEVSKIFKTEHGYHIVLVE 113 >gi|307637349|gb|ADN79799.1| hypothetical protein hp908_0672 [Helicobacter pylori 908] gi|325995941|gb|ADZ51346.1| hypothetical protein hp2018_0650 [Helicobacter pylori 2018] gi|325997535|gb|ADZ49743.1| hypothetical protein hp2017_0649 [Helicobacter pylori 2017] Length = 414 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 85/290 (29%), Gaps = 35/290 (12%) Query: 32 SYKSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 + + + ++ +NG IT I + Q+ + + A LI E +K Sbjct: 148 NATNNTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKN 201 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 QEIE+ I D + ++ A+ G+ + F L +G ++ L ++ Sbjct: 202 QEIERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQEL 260 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 ++N + E + K+ ++ Sbjct: 261 LRNILLTNVDTSS-ETKMREYYNKHKEQFSIPTEIETVRYTSTNQEDLERAMSNPNLEVP 319 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 + + +++ Q + Q + T G Sbjct: 320 GVSKANEKIE--------------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQ 359 Query: 268 EY---IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I ++ K +++ + +K E+ +KLR + I Sbjct: 360 FITFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 409 >gi|189425603|ref|YP_001952780.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter lovleyi SZ] gi|189421862|gb|ACD96260.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter lovleyi SZ] Length = 92 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 8/79 (10%), Positives = 19/79 (24%), Gaps = 1/79 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 + + + +S + G + +F + + Sbjct: 13 TEAECLKLKTEIEGGADFGEVAKLNSSCPSRMRGGDLGAFGPGQMVKEFDEVVFSGEIGK 72 Query: 257 TTNPYVTQKGVEYIAICDK 275 P TQ G I + + Sbjct: 73 VLGPVRTQFGYHLIEVTKR 91 >gi|223997298|ref|XP_002288322.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220975430|gb|EED93758.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 120 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 22/72 (30%), Gaps = 4/72 (5%) Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ---NLLKKSQNNTTNPYVTQKGVEY 269 + ++++ G + +F + P TQ G Sbjct: 48 NSFTSLASEYSTCPSKARGGSLGSFGPGTMVKEFDDVIFSPETKMGEVVGPVKTQFGYHL 107 Query: 270 IAICDKRDLGGE 281 I + DKR GG+ Sbjct: 108 I-VVDKRTGGGD 118 >gi|313636759|gb|EFS02412.1| foldase protein PrsA [Listeria seeligeri FSL S4-171] Length = 167 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 45/135 (33%), Gaps = 4/135 (2%) Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLH 243 + + + K+ E+ K + +++++ + GK + Sbjct: 25 WQPDITVSHILVADEAKAKEVEQKLKDGEKFADLAKEYSTDTATKDNGGKLAPFGPGKMD 84 Query: 244 PQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKH 300 P F+ K++ + ++P TQ G I + + K + ++ Sbjct: 85 PAFEKAAYALKNKGDISDPVKTQYGYHIIQMDEPATKTTFDKDKKAVKESYLQSQLTTEN 144 Query: 301 EAEYVKKLRSNAIIH 315 + +KK +A + Sbjct: 145 MQKTLKKEYKDANVK 159 >gi|237714319|ref|ZP_04544800.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D1] gi|229445483|gb|EEO51274.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D1] Length = 514 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 17/290 (5%), Positives = 71/290 (24%), Gaps = 38/290 (13%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 ++ + + +A + +NG + + + Sbjct: 5 LLLGCISLFVVAVFAQEDPVLMRVNGREVLRSEFENAYRRYAERS--------------- 49 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 ++ + + L E + + + Sbjct: 50 ---------------NARLSPKEYAALFAQSKLKVEAARAAGLDTTTVFRKQHEKCWTEL 94 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + ++ M + + K + + V + R + + + + Sbjct: 95 VESYLIDKQVMDSCARVLYQKMGLKARSGRVQVMQIFKRLPQTVTSRHLEEEKARMDSIY 154 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 + + ++ + + ++ + P+ Sbjct: 155 RVIQNQPDLNFNRLVEIYSDDKQSRWIEG-------LETTSEFEDVAFSLAKGTVSQPFF 207 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK-IEKHEAEYVKKLRSN 311 T +G+ + + D+ + + L + + ++K A + +L+ + Sbjct: 208 TPEGIHILKVIDREEAFAYEDVSGRLIERLRRKEILDKGTAAMLDRLKRS 257 >gi|107103693|ref|ZP_01367611.1| hypothetical protein PaerPA_01004764 [Pseudomonas aeruginosa PACS2] gi|116052218|ref|YP_788938.1| peptidyl-prolyl cis-trans isomerase C2 [Pseudomonas aeruginosa UCBPP-PA14] gi|296387268|ref|ZP_06876767.1| peptidyl-prolyl cis-trans isomerase C2 [Pseudomonas aeruginosa PAb1] gi|313109626|ref|ZP_07795572.1| peptidyl-prolyl cis-trans isomerase C2 [Pseudomonas aeruginosa 39016] gi|115587439|gb|ABJ13454.1| peptidyl-prolyl cis-trans isomerase C2 [Pseudomonas aeruginosa UCBPP-PA14] gi|310882074|gb|EFQ40668.1| peptidyl-prolyl cis-trans isomerase C2 [Pseudomonas aeruginosa 39016] Length = 93 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 25/80 (31%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 + + + + + + ++ G + +F ++ + N Sbjct: 14 EAKCNELKTAIEGGADFAEVAREHSTCPSGRDGGNLGSFGPGQMVREFDQVVFSAPLNVV 73 Query: 259 -NPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|323496638|ref|ZP_08101690.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Vibrio sinaloensis DSM 21326] gi|323318291|gb|EGA71250.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Vibrio sinaloensis DSM 21326] Length = 92 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 26/75 (34%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + + K +K+++ G + PQF + + Sbjct: 15 KEQAEDIIKQLKKGAKFQTLAKKYSTCPSGKRGGDLGEFKRGQMVPQFDKVCFSGETLVP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G + + Sbjct: 75 HLVKTKFGWHVVKVL 89 >gi|294667019|ref|ZP_06732247.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603236|gb|EFF46659.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 294 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/199 (10%), Positives = 49/199 (24%), Gaps = 12/199 (6%) Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + + Q + A +I V+ +I A + + Sbjct: 85 EQARREHLQDDPVVAARIRQATDAILAKAVQTRARESAQIDAAQIKAQFDAHPHDYDEVH 144 Query: 179 LIRTVLFSIPDNKLQ-----NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIG 232 L + P + R + ++ + + G Sbjct: 145 LSHLFVALKPQGAARRGTPLTDAQALARAQRLKQQLESGTPFAELAMRQSDDASTAAEGG 204 Query: 233 KA-QYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 + L + + + + P +G I + +R + A Q Sbjct: 205 ELSPMFLRNVADAFVAPVQDLAVGQVSAPVRGAEGYHLIRVDARRPATLDSA-----RGQ 259 Query: 292 NTPTKIEKHEAEYVKKLRS 310 ++ A +++LR Sbjct: 260 IEVQLRDQAAANALEQLRQ 278 >gi|294626443|ref|ZP_06705043.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599242|gb|EFF43379.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 294 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 20/199 (10%), Positives = 49/199 (24%), Gaps = 12/199 (6%) Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + + Q + A +I V+ +I A + + Sbjct: 85 EQARREHLQDDPVVAARIRQATDAILAKAVQTRARESAQIDAAQIKAQFDAHPHDYDEVH 144 Query: 179 LIRTVLFSIPDNKLQ-----NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIG 232 L + P + R + ++ + + G Sbjct: 145 LSHLFVALKPQGAARRGTPLTDAQALARAQRLKQQLESGTPFAELAMRQSDDASTAAEGG 204 Query: 233 KA-QYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 + L + + + + P +G I + +R + A Q Sbjct: 205 ELSPMFLRNVADAFVAPVQDLAVGQVSAPVRGAEGYHLIRVDARRPATLDSA-----RGQ 259 Query: 292 NTPTKIEKHEAEYVKKLRS 310 ++ A +++LR Sbjct: 260 IEVQLRDQAAANALEQLRQ 278 >gi|297621734|ref|YP_003709871.1| hypothetical protein wcw_1516 [Waddlia chondrophila WSU 86-1044] gi|297377035|gb|ADI38865.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044] Length = 349 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 42/326 (12%), Positives = 102/326 (31%), Gaps = 32/326 (9%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAM-----SSRIRTTINGEVITDGDISKRIALLK 64 S F+ L+ F+L V S ++RI ING+ I+ D+ K++ + Sbjct: 4 SIFLTLVAALFMLGQLAAVSANSMFLAQPKHIFVNNRILAKINGQPISVIDVMKQMDMFF 63 Query: 65 LQKINGELE-------------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 ++ K A+++LI + L K + ++ + V Sbjct: 64 YRQFPQYANSPEARYQFYNMSWKRALEDLIDKELIKADAKEVNLPMTHGEVRQEIENIFG 123 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 ++ D + ++ + V + + + + K + Sbjct: 124 PNIIANLDKAGLTYEEAFDLTKEDILFKKMMMAR--VNSIVLRSITPQMV-VDHYKTWAE 180 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 + E I V+ + + + + L + + L + S+ Sbjct: 181 QNSQPEKWIYQVISVRGGSNEASSTIANTVHHLLRDKDVELSQLKSLL--HPDEFKLCSV 238 Query: 232 GKAQYLLESDLHPQFQNL-LKKSQNNTTNPY-------VTQ-KGVEYIAICDKRDLGGEI 282 + L S++ ++ + + P T + Y+ +K Sbjct: 239 SQEYSLSPSEISDSYREILSLLKPGAFSEPIAQKSRASKTDVYRIFYLKEIEKGGAPSFY 298 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++ L Q ++ +A+Y+ +L Sbjct: 299 EIQNRLRDQLVEKEMATEQAKYLSRL 324 >gi|323354333|gb|EGA86173.1| Ess1p [Saccharomyces cerevisiae VL3] Length = 190 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 15/193 (7%), Positives = 45/193 (23%), Gaps = 12/193 (6%) Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 LI + + + + D + S + F + + Sbjct: 6 LIPTHNRLRHHNDAPMPSDVASSTGLPTPWTVRYSKSKKREYFFNPETKHSQWEEPEGTN 65 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + + L + I + Q+ Sbjct: 66 KDQLHKHLRDHPV--RVRCLHILIKH---------KDSRRPASHRSENITISKQDATDEL 114 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT 258 K + + + ++ + G + ++ P F++ + + Sbjct: 115 KTLITRLDDDSKTNSFEALAKERSDCSSYKRGGDLGWFGRGEMQPSFEDAAFQLKVGEVS 174 Query: 259 NPYVTQKGVEYIA 271 + + GV I Sbjct: 175 DIXESGSGVHVIK 187 >gi|239906715|ref|YP_002953456.1| hypothetical protein DMR_20790 [Desulfovibrio magneticus RS-1] gi|239796581|dbj|BAH75570.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 597 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 98/308 (31%), Gaps = 39/308 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 ++ + A + +NG I ++ R + ++ + ++ AV++L Sbjct: 13 AALVLSFCLWGCGRDTADEPGVVAVVNGSPIRLAELEMRNDVSRISQP--AVDNPAVEDL 70 Query: 81 -----------IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 +V L QE+++ G + + A E F L ++ I Sbjct: 71 RAGLGAALADAVVARLVGQELKRLGQAPTPEELEKA--EAAVRADYPGEAFERMLLEEHI 128 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 +++ LA + ++ + E A ++ + R ++ + S D Sbjct: 129 DLARWREMLADRLALEKFRQDVLLPGQRVGVSEAAAYYKEHQAAFARPAMVTLRVVSGRD 188 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + R S + S+G+ + E+ L +++ Sbjct: 189 AEAVKAALAAARK---------------------SGQGEASLGREAVMPEAGLPQAWRDA 227 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK--AYLSAQNTPTKIEKHEAEYVK 306 K T P + + + ++ K A + A+ T K+ K ++ Sbjct: 228 LRGKKPGEATPPLAMGREHVALVLVERTPAAMPDPAKAYARVEARLTEEKLTKAFDAWLA 287 Query: 307 KLRSNAII 314 K A I Sbjct: 288 KALGQATI 295 >gi|262408152|ref|ZP_06084699.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_22] gi|294645122|ref|ZP_06722847.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|294809726|ref|ZP_06768413.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] gi|262353704|gb|EEZ02797.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_22] gi|292639546|gb|EFF57839.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|294443060|gb|EFG11840.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] Length = 515 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 17/290 (5%), Positives = 71/290 (24%), Gaps = 38/290 (13%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 ++ + + +A + +NG + + + Sbjct: 6 LLLGCISLFVVAVFAQEDPVLMRVNGREVLRSEFENAYRRYAERS--------------- 50 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 ++ + + L E + + + Sbjct: 51 ---------------NARLSPKEYAALFAQSKLKVEAARAAGLDTTTVFRKQHEKCWTEL 95 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + ++ M + + K + + V + R + + + + Sbjct: 96 VESYLIDKQVMDSCARVLYQKMGLKARSGRVQVMQIFKRLPQTVTSRHLEEEKARMDSIY 155 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 + + ++ + + ++ + P+ Sbjct: 156 RVIQNQPDLNFNRLVEIYSDDKQSRWIEG-------LETTSEFEDVAFSLAKGTVSQPFF 208 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK-IEKHEAEYVKKLRSN 311 T +G+ + + D+ + + L + + ++K A + +L+ + Sbjct: 209 TPEGIHILKVIDREEAFAYEDVSGRLIERLRRKEILDKGTAAMLDRLKRS 258 >gi|152983709|ref|YP_001346304.1| peptidyl-prolyl cis-trans isomerase C2 [Pseudomonas aeruginosa PA7] gi|150958867|gb|ABR80892.1| peptidyl-prolyl cis-trans isomerase C2 [Pseudomonas aeruginosa PA7] Length = 93 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 25/80 (31%), Gaps = 1/80 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 + + + + + + ++ G + +F ++ + N Sbjct: 14 EAKCNELKTAIEGGADFAEIARQHSTCPSGRDGGNLGSFGPGQMVREFDQVVFSAPLNVV 73 Query: 259 -NPYVTQKGVEYIAICDKRD 277 P TQ G + + ++D Sbjct: 74 QGPVKTQFGYHLLEVTSRQD 93 >gi|217032492|ref|ZP_03437984.1| hypothetical protein HPB128_156g22 [Helicobacter pylori B128] gi|298736357|ref|YP_003728883.1| hypothetical protein HPB8_862 [Helicobacter pylori B8] gi|216945838|gb|EEC24459.1| hypothetical protein HPB128_156g22 [Helicobacter pylori B128] gi|298355547|emb|CBI66419.1| conserved hypothetical protein [Helicobacter pylori B8] Length = 408 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 83/288 (28%), Gaps = 35/288 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 144 AGNTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 197 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 198 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 256 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + E + K+ ++ Sbjct: 257 NILLTNVDTSS-ETKMREYYNKHKEQFSIPTEIETVRYTSTNQEDLERAMADPNLEIPGV 315 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 + + +++ Q + Q + T G Sbjct: 316 SKANEKIE--------------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQFI 355 Query: 270 ---IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I ++ K +++ + +K E+ +KLR + I Sbjct: 356 TFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 403 >gi|317177476|dbj|BAJ55265.1| hypothetical protein HPF16_0668 [Helicobacter pylori F16] Length = 419 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 89/289 (30%), Gaps = 37/289 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 155 AGSTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 208 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 209 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 267 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + + NQ +++ + + Sbjct: 268 NILLTNVDTSSETKMREYYNKHKEQFSIPTEIETVRY----TSTNQEDLERAMSNPNLEV 323 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG--- 266 + K K + L+PQ + + + P + G Sbjct: 324 PGVSKANEK------------------IEMKTLNPQIAQVFISHEQGSFTPIMNGGGGQF 365 Query: 267 -VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 YI ++ K +++ + +K E+ +KLR + I Sbjct: 366 ITFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 414 >gi|283850615|ref|ZP_06367902.1| hypothetical protein DFW101DRAFT_0472 [Desulfovibrio sp. FW1012B] gi|283573858|gb|EFC21831.1| hypothetical protein DFW101DRAFT_0472 [Desulfovibrio sp. FW1012B] Length = 520 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 35/296 (11%), Positives = 87/296 (29%), Gaps = 25/296 (8%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------GELEKI---AVQELI 81 + A + +NG I D+ R L +L +L + ++I Sbjct: 26 GCKQDAAREPGVVAVVNGAPIRLPDLEARHGLGRLGAPEAGNPAVEQLRAEYGAVLADMI 85 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 V L +QE+ + G+ V Q + + ++ + + + Sbjct: 86 VARLVRQELARLGLAVTPAEVEAAEAQVRADYATGDSGDAF---ERMLLEERIDLGRWRE 142 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + + F + + ++ + + R Sbjct: 143 VLGDRLALAKFSREVLRQNARVDVSEAAAYYKE----------HIDAFTRPARVRLAEVR 192 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260 ++AE + L + + + D + + E +L ++ +K + Sbjct: 193 GREAEAVQAALTAWRKSGQSASLESLDGITVREATVPEKNLAEPWRQAVKGLKPGEASGL 252 Query: 261 YVTQKGVEYIAICDKRDLGGEIALK--AYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 ++ + + K A + A+ K+EK A ++ + + A I Sbjct: 253 LGADTETWFLVVLSREPATVFDPAKAYARVEAELGARKLEKTFAAWLAEALAGARI 308 >gi|188527492|ref|YP_001910179.1| hypothetical protein HPSH_03560 [Helicobacter pylori Shi470] gi|188143732|gb|ACD48149.1| hypothetical protein HPSH_03560 [Helicobacter pylori Shi470] Length = 426 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 83/288 (28%), Gaps = 35/288 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 162 AGSTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 215 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 216 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 274 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + E + K+ ++ Sbjct: 275 NILLTNVDTSS-ETKMREYYNKHKEQFSIPTEIETVRYTSTNQEDLERAMADHNLEIPGV 333 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 + + +++ Q + Q + T G Sbjct: 334 SKANEKIE--------------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQFI 373 Query: 270 ---IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I ++ K +++ + +K E+ +KLR + I Sbjct: 374 TFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 421 >gi|261838101|gb|ACX97867.1| hypothetical protein KHP_0662 [Helicobacter pylori 51] Length = 411 Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 83/288 (28%), Gaps = 35/288 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 147 AGSTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 200 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 201 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 259 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + E + K+ ++ Sbjct: 260 NILLTNVDTSS-ETKMREYYNKHKEQFSIPTEIETVRYTSTNQEDLERAMADPNLEIPGV 318 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 + + +++ Q + Q + T G Sbjct: 319 SKANEKIE--------------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQFI 358 Query: 270 ---IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I ++ K +++ + +K E+ +KLR + I Sbjct: 359 TFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 406 >gi|15645283|ref|NP_207453.1| hypothetical protein HP0659 [Helicobacter pylori 26695] gi|2313789|gb|AAD07729.1| predicted coding region HP0659 [Helicobacter pylori 26695] Length = 414 Score = 60.1 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 84/288 (29%), Gaps = 35/288 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 150 ANNTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 203 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 204 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 262 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + E + K+ ++ Sbjct: 263 NILLTNVDTSS-ETKMREYYNKHKEQFSIPTEIETVRYTSTNQEDLERAMADPNLEIPGV 321 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 + + +++ Q + Q + T G Sbjct: 322 SKANEKIE--------------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQFI 361 Query: 270 ---IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I ++ K +++ + +K E+ +KLR + I Sbjct: 362 TFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 409 >gi|255067897|ref|ZP_05319752.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria sicca ATCC 29256] gi|255047885|gb|EET43349.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria sicca ATCC 29256] Length = 616 Score = 60.1 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 77/262 (29%), Gaps = 7/262 (2%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 + +A ++ + L + I+ + +++ K F + + Sbjct: 131 DQFVADIRERYALQSLINLVQNGAIISDAQAEQLIKLTQATRDIRSVTFNPEAFVSQVKV 190 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + + D Q + ++ I + D K E E+ + Sbjct: 191 DDAALKAYYEAHKKDYLIPQGVKLEYI--ALSAKDLADKQAVSEDEVKKAFDEQAPHLSP 248 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP--KDCNKLEKFASK-IHDVSIGK 233 I + F +P + + K D + L+ + +K++ G Sbjct: 249 RREIAHIFFPVPQDADETVRAAIKAEADKVAAELKAKPADFADLAKKYSKDTASASKGGN 308 Query: 234 AQYLLE-SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 YL + L +N+ + ++ T G + + + + D KA + A Sbjct: 309 LGYLSKDGGLGTDLENVAFSLPKGGISDVVQTPVGYDIVQVLNIEDKVSLEHEKARIEAD 368 Query: 292 NTPTKIEKHEAEYVKKLRSNAI 313 K +KL A Sbjct: 369 LKLKKAASEFNSVKEKLSEEAF 390 >gi|332284237|ref|YP_004416148.1| peptidyl-prolyl cis-trans isomerase D [Pusillimonas sp. T7-7] gi|330428190|gb|AEC19524.1| peptidyl-prolyl cis-trans isomerase D [Pusillimonas sp. T7-7] Length = 655 Score = 60.1 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 20/198 (10%), Positives = 58/198 (29%), Gaps = 6/198 (3%) Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 D + +K +Q A + + + + + +++ + K + + Sbjct: 208 DADIQDWYEKNKQSLELPEQLSAQYLLLNEEAAMANLPQISDEDLQKYYEQNKARYVQPA 267 Query: 177 EYLIRTVLFSIPDNKLQNQ--GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGK 233 + + +IP + + Q + K A+ ++ + + GK Sbjct: 268 RVNVSHIQINIPADASEAQRSEALAKAQDIAKRAQADAAAFAELAQNESQDAGTAKEGGK 327 Query: 234 AQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSA 290 ++ + Q + ++ ++ G + KA + A Sbjct: 328 LGWITKGSWPAQLEQVVFALKAGQVSDAVEGPGGYHVFLANEVQAEKGESFEEAKAKVQA 387 Query: 291 QNTPTKIEKHEAEYVKKL 308 + + A+ KL Sbjct: 388 EVSRQLGADRYADMATKL 405 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 27/262 (10%), Positives = 72/262 (27%), Gaps = 16/262 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T ++L+ +L F ++ + Y ++ T+ IT D + Sbjct: 1 MFDFIRTH-QRLMQLVLLVLILPSFVLIGVSGYTNYVSGDHDIVTLGDTSITQQDFDQAR 59 Query: 61 -------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 A + ++ LI T+ + K + + + Sbjct: 60 RNQLQQLQQSSQGAFDPAILDSPAARSALLESLIDRTVLVETATKERFSVSDSVLRQTIA 119 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + + D + + Q ++ + Sbjct: 120 SMPQLQVDGQFSAERYNDVLASAGLTTRDFEQSQ--RGELALGRVLGPVTMTASVPSVVI 177 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 K+K + IR + F + + + Q E+++ L ++ Sbjct: 178 DKLKLALTEQRTIRLLAFPAAEQEKEVQITDADIQDWYEKNKQSLELPEQLSAQYLLLNE 237 Query: 228 DVSIGKAQYLLESDLHPQFQNL 249 + ++ + + DL ++ Sbjct: 238 EAAMANLPQISDEDLQKYYEQN 259 >gi|254507147|ref|ZP_05119284.1| peptidyl-prolyl cis-trans isomerase C [Vibrio parahaemolyticus 16] gi|219549857|gb|EED26845.1| peptidyl-prolyl cis-trans isomerase C [Vibrio parahaemolyticus 16] Length = 92 Score = 60.1 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 26/75 (34%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + + K +K+++ G + PQF + + Sbjct: 15 KEQAEDIIKQLKKGAKFQTLAKKYSTCPSGKKGGDLGEFRRGQMVPQFDKVCFSGETLVP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G + + Sbjct: 75 HLVKTKFGWHVVKVL 89 >gi|303257438|ref|ZP_07343451.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderiales bacterium 1_1_47] gi|302859795|gb|EFL82873.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderiales bacterium 1_1_47] Length = 261 Score = 60.1 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 27/295 (9%), Positives = 86/295 (29%), Gaps = 49/295 (16%) Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVE 83 + ++ A ++ T+NG+ ++ + + + L+ +LE A L+ + Sbjct: 1 MLAAALAGVLPAAVAQTAFTVNGQFVSVEEQKQLMDFLRANGVTNEKQLENAARSILLEQ 60 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + +Q G+ D + A+ + Sbjct: 61 KIIEQAARNEGLLEDPRVRVLISEKQAQ-------------------------------L 89 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + ++ + ++ E ++ + + + + + + K Sbjct: 90 YGSILSRRYASEHPITEEQVRNRYDSLLSSYDPHEIKFRHILVKTPEEAREIIQSLKV-- 147 Query: 204 DAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLL-ESDLHPQFQNLLKKSQNN--TTN 259 + ++ + + G+ + + L P + Q Sbjct: 148 --------GSDFGSLAKERSLDQSTSQNGGQIPFTNIRNVLVPGLAEAILALQPGDLLPV 199 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P+ ++ G + + +KR++ + + E++ L+ +A I Sbjct: 200 PFKSKLGYHVVLLEEKREVP--FPSYEEVKPKVLSELERLQTTEFLNDLQKDAKI 252 >gi|24115070|ref|NP_709580.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Shigella flexneri 2a str. 301] gi|30064928|ref|NP_839099.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Shigella flexneri 2a str. 2457T] gi|110807533|ref|YP_691053.1| peptidyl-prolyl cis-trans isomerase C [Shigella flexneri 5 str. 8401] gi|24054335|gb|AAN45287.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Shigella flexneri 2a str. 301] gi|30043189|gb|AAP18910.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Shigella flexneri 2a str. 2457T] gi|110617081|gb|ABF05748.1| peptidyl-prolyl cis-trans isomerase C [Shigella flexneri 5 str. 8401] gi|281603167|gb|ADA76151.1| Peptidyl-prolyl cis-trans isomerase C [Shigella flexneri 2002017] gi|313647778|gb|EFS12225.1| peptidyl-prolyl cis-trans isomerase C [Shigella flexneri 2a str. 2457T] gi|332750998|gb|EGJ81403.1| peptidyl-prolyl cis-trans isomerase C [Shigella flexneri 4343-70] gi|332751087|gb|EGJ81491.1| peptidyl-prolyl cis-trans isomerase C [Shigella flexneri K-671] gi|332751921|gb|EGJ82316.1| peptidyl-prolyl cis-trans isomerase C [Shigella flexneri 2747-71] gi|332764381|gb|EGJ94616.1| PPIC-type PPIASE domain protein [Shigella flexneri 2930-71] gi|332996860|gb|EGK16480.1| peptidyl-prolyl cis-trans isomerase C [Shigella flexneri VA-6] gi|332997909|gb|EGK17516.1| peptidyl-prolyl cis-trans isomerase C [Shigella flexneri K-218] gi|332998281|gb|EGK17883.1| peptidyl-prolyl cis-trans isomerase C [Shigella flexneri K-272] gi|333013578|gb|EGK32945.1| peptidyl-prolyl cis-trans isomerase C [Shigella flexneri K-304] gi|333013820|gb|EGK33183.1| peptidyl-prolyl cis-trans isomerase C [Shigella flexneri K-227] Length = 93 Score = 60.1 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 20/78 (25%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D +K + G + + P F + + Sbjct: 13 KEEKLALDLLVQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 T P TQ G I + Sbjct: 73 EPTGPLHTQFGYHIIKVL 90 >gi|118602656|ref|YP_903871.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567595|gb|ABL02400.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 615 Score = 60.1 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 29/254 (11%), Positives = 72/254 (28%), Gaps = 14/254 (5%) Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 I ++ +I L + E+ K D + HA + + Sbjct: 145 IKYEAIKLQELTETQIKYNLLDSAFVIPTELAKLQKLNDQQRQFSYIAIHADDYVKEVKV 204 Query: 120 FSSFLDKQGIGDNHFKQY-LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + ++ + ++ N + E+ + + RE Sbjct: 205 DVQSVKNFYNNKKALFFAPEQVKIEFVELSLNKISKNIKVSDDELFNFYKDEQERFTREE 264 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYL 237 + + D + K E+++ + G + Sbjct: 265 ERQAQHILLEDKSTA---------QKVIALLNNGGKFAKLAEQYSQDTASKANAGDLGFF 315 Query: 238 LESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTP 294 + P+F+ + N ++ ++ G I + + + L A+K+ L T Sbjct: 316 TRGVMLPEFEKKVFAMKLNEVSDLVKSEFGYHIIKLNNIKVKTLKPFDAVKSELLDLYTQ 375 Query: 295 TKIEKHEAEYVKKL 308 T+ +K ++L Sbjct: 376 TQAQKVFYSLTEQL 389 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 25/226 (11%), Positives = 70/226 (30%), Gaps = 12/226 (5%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + ++ L + I F + I Y +S+ + +++G I+ + + Sbjct: 1 MLGSIRNKTKGWVAYLIVGLITIPFVLFGISEYF-TGVSNIVIASVDGVDISKAEFLAKF 59 Query: 61 ALLKLQKING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 K + L++ + ++I + L +Q + +N +N + Sbjct: 60 NPQKRRLQQELDKKYDTEFDAMLKQSILNQMIDKYLLEQLSNELSYETTANELNTIIQAN 119 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + + +Y AI+ + + L + K + Sbjct: 120 NLFKKKGRFSLEKYKQLLRLNGYTTIKYEAIKLQELTETQIKYNLLDSAFVIPTELAKLQ 179 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 N R++ + +++ K + +++ P+ Sbjct: 180 KLNDQQRQFSYIAIHADDYVKEVKVDVQSVKNFYNNKKALFFAPEQ 225 >gi|71282523|ref|YP_267498.1| peptidyl-prolyl cis-trans isomerase C [Colwellia psychrerythraea 34H] gi|71148263|gb|AAZ28736.1| peptidyl-prolyl cis-trans isomerase C [Colwellia psychrerythraea 34H] Length = 92 Score = 60.1 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 26/75 (34%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 ++ +D E + K +K++S G + PQF + K + Sbjct: 15 KEIAEDIIEQLGKGAKFQTLAKKYSSCPSGKKGGDLGEFKRGQMVPQFDKIAFKGALLES 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G I + Sbjct: 75 HLVKTKFGWHVIKVL 89 >gi|328953890|ref|YP_004371224.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfobacca acetoxidans DSM 11109] gi|328454214|gb|AEB10043.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfobacca acetoxidans DSM 11109] Length = 629 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 27/264 (10%), Positives = 67/264 (25%), Gaps = 13/264 (4%) Query: 61 ALLKLQKINGELEKIAVQE----LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 L + + + + + I K E + + Sbjct: 141 RRLPASEYEEQERQQLLVQKMVHFITSFAKISEADLQEAYRLQQETVRVEYVVLGPSQFL 200 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML---KYGNLEMEIPANKQKMKNI 173 E + + Q ++H + + + + + F + +I Sbjct: 201 KEQQAGAAEMQQYYESHPETFREPEKVKVRYIFFKFNDFDGQIKADREKIETYYYDHLED 260 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI-- 231 R IR + Q+ AE+ R + + + Sbjct: 261 YSRPQTIRVSQLFLEPPSKAGTAEQQRFRLLAEKLLQRARAGESFEQLQKKYSPEAEGRI 320 Query: 232 --GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAY 287 G+ + P+++ + + T +G I + D R ++A Sbjct: 321 QAGELGLVKRGQNIPEWEAVAFHLKKGGIGMAKTPRGYYLIKVNDILERKTPPLAEVQAQ 380 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSN 311 + + +K + LR+ Sbjct: 381 VEKSWRAEEAKKLAHRQAEGLRAE 404 Score = 55.8 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 26/237 (10%), Positives = 69/237 (29%), Gaps = 19/237 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + S + ++++F + I S++S ++G I + K Sbjct: 1 MLDFMRKHASSWFVTGIIGAIVVVFVLWGIGSFRSAQFQE--VAEVDGAKIYLPEYYKAY 58 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 L L + A+ ++I E L KQ + G+ + + Sbjct: 59 QNLVRNYQEQMGGESNEEVAKTLRLREQALGQMIDELLIKQASNRLGLNVTDAELRDYIR 118 Query: 108 Q---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF-MLKYGNLEMEI 163 + A G + + + L ++ + + +++ Q + +V K +++ Sbjct: 119 RNPAFADERGFNEKRYHQLLARRRLPASEYEEQERQQLLVQKMVHFITSFAKISEADLQE 178 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 Q+ L + + + ++ + Sbjct: 179 AYRLQQETVRVEYVVLGPSQFLKEQQAGAAEMQQYYESHPETFREPEKVKVRYIFFK 235 >gi|118580921|ref|YP_902171.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelobacter propionicus DSM 2379] gi|118503631|gb|ABL00114.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelobacter propionicus DSM 2379] Length = 93 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 6/79 (7%), Positives = 19/79 (24%), Gaps = 1/79 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 ++ ++ + G+ + +F + + Sbjct: 13 TEEACLKLKQEIEAGADFAACARDHSLCPSSRQGGELGEFGPGQMVKEFDEVVFSAEVGT 72 Query: 257 TTNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 73 VQGPVKTQFGYHLVEVTRR 91 >gi|187251883|ref|YP_001876365.1| hypothetical protein Emin_1480 [Elusimicrobium minutum Pei191] gi|186972043|gb|ACC99028.1| hypothetical protein Emin_1480 [Elusimicrobium minutum Pei191] Length = 286 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 36/312 (11%), Positives = 88/312 (28%), Gaps = 41/312 (13%) Query: 15 LLTTYFVLIIFCIVPIVSY----KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70 + + ++ ++ + A S + G IT D + L + Sbjct: 1 MRRIVIISVLAALLSAGCKEEKPAAKAHPSNALANVGGVFITQKDFDNAVIDETLNRKYL 60 Query: 71 EL---EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 E + + L+ E L +Q KSG + + + + + Sbjct: 61 ETSFGKNALINALVREQLIQQASLKSG---------------SAQSEEFIKTITDIQNDF 105 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 K+ +A + + + E EI +K ++ Sbjct: 106 SKRLEETKKEVATKIWIDSLRNK---GEISVTEDEIKDYHKKYSYEMTIRQMLL------ 156 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQ 245 + + R A + R + ++++ + DVS + ++ L Sbjct: 157 ---TDPDTANLVLRELKATNNSNREKRFIELAKRYSIDLDDVSTDGKQFTFMPGEFLPEI 213 Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305 S + T +G I ++ + + + + K + +Y+ Sbjct: 214 ENASANSSSGLVQGFFKTSRGFHIIYKAGEKKITLK-DARDRIKNILEKKKFD----DYL 268 Query: 306 KKLRSNAIIHYY 317 + L + Y Sbjct: 269 ESLAVKYKVEVY 280 >gi|254456744|ref|ZP_05070172.1| conserved hypothetical protein [Campylobacterales bacterium GD 1] gi|207085536|gb|EDZ62820.1| conserved hypothetical protein [Campylobacterales bacterium GD 1] Length = 278 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 79/289 (27%), Gaps = 23/289 (7%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 IF + + S + I + G IT DI K + L K+ K A LI + Sbjct: 4 IFLTIMLALTLSAEIVDGIAVIVKGSAITLYDIKKEMQLSKIDA------KSATDALIRK 57 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 L+ QEI++ I+ S V + A LS +F + + + + + Sbjct: 58 ALENQEIDERKISVSSGEVYDDIKKTAERNKLSVSEFYEAVRNSSGLTSEELKEKIKEKL 117 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + + + E + + + Q Sbjct: 118 LSQKLYSAIAYSGVSEPTEDEIEAYFKSHKDSFAHPSGFKVLIYQSTNKQKLQEKIDNPM 177 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263 + L + L+ + + Sbjct: 178 FYSPDISSNEQSLPYDRISPELAS--------LLERTSLNSFTAAVPDGKGGYMS----- 224 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 I ++ G + ++ + T + E+ +Y +LR NA Sbjct: 225 ---FYIKEIESAKETGLDS-VRNQIVNMITAEQREQVLGDYFARLRHNA 269 >gi|225568647|ref|ZP_03777672.1| hypothetical protein CLOHYLEM_04725 [Clostridium hylemonae DSM 15053] gi|225162575|gb|EEG75194.1| hypothetical protein CLOHYLEM_04725 [Clostridium hylemonae DSM 15053] Length = 350 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 23/310 (7%), Positives = 73/310 (23%), Gaps = 16/310 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K F + +++ + + T+ + IT D++ A + Sbjct: 1 MKKRVLLFAITGLLAAGVLTGCGSIDENDVVATVGEKEIT-ADVANFFARYTQAQYETYY 59 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA-----EDFSSFLDKQ 127 ++ + E + + + + G E+ + Sbjct: 60 SGYLGDDMWNTDASEGETYEEFVKDSVLNELEKMIVLEEHMGDYDVSLTEEEKAVIEKSA 119 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI------TVREYLIR 181 D + + + A + + Sbjct: 120 KAFDEANTLESKEKISGSRKTVKRVLTLMAVQKKMAEAIEAGADTEVSDDEAAQKSMQYV 179 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI-GKAQYLLES 240 + D+ ++ + +A++ + + F++ + + + Sbjct: 180 LFPYKTTDDSGKSSDLSDEEKAEAKKKAGSFAEGAGTADDFSALATEQGVEAQTATFDSE 239 Query: 241 DLHPQ---FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 P + + T T G + D + K + + Sbjct: 240 STSPAEDVVKAADALGEGEVTGVIETDSGCYVAKVTSLLDREATDSKKESIVQERKTKLY 299 Query: 298 EKHEAEYVKK 307 +++KK Sbjct: 300 NDTCDKWIKK 309 >gi|290508670|ref|ZP_06548041.1| nitrogen fixation protein NifM [Klebsiella sp. 1_1_55] gi|289778064|gb|EFD86061.1| nitrogen fixation protein NifM [Klebsiella sp. 1_1_55] Length = 266 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 10/163 (6%), Positives = 41/163 (25%), Gaps = 3/163 (1%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + R + +Q + + + Sbjct: 98 IASQAPRPDPATVQAWYLRHQAQFMRPEQRLTRHLLLTVDGDDQAVYSRIRELHGQIEAS 157 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 ++ + + G+ ++ L + L ++N + P ++ G + Sbjct: 158 REAFAPLAQRHSHCPSALDGGRLGWIGRGLLYPQLEEALFALAENALSAPVASELGWHLV 217 Query: 271 AICDKRDLGGEIALK--AYLSAQNTPTKIEKHEAEYVKKLRSN 311 R + + +H+ +++ ++ + Sbjct: 218 WCEAIRPAAPMTPEQALESARDYLSQQSQRRHQRQWLAEMLAR 260 >gi|229367552|gb|ACQ58756.1| Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Anoplopoma fimbria] Length = 156 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 31/106 (29%), Gaps = 1/106 (0%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + R + + ++ K EE + K + +F+ Sbjct: 47 KVRCSHLLVKHTQSRRPSSWREQNITRTKDEALELIQKYIEEIKSGEEKFESLASQFSDC 106 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + + F++ + + P T+ GV I Sbjct: 107 SSAKNGGDLGQFGKGQMQKPFEDASFALKVGDMSGPVFTESGVHII 152 >gi|261380078|ref|ZP_05984651.1| conserved hypothetical protein [Neisseria subflava NJ9703] gi|284797294|gb|EFC52641.1| conserved hypothetical protein [Neisseria subflava NJ9703] Length = 290 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 31/294 (10%), Positives = 82/294 (27%), Gaps = 15/294 (5%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET 84 F +++ S + ++ T+NG+ I I ++A ++ N + Q L Sbjct: 6 FASALMLALTSSTLLAQTLVTVNGQAIDSSVIDDQVASVRASNPNVKDTPELRQMLTERQ 65 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 + + + + F + +A+ + F+ L Q+ Sbjct: 66 VISTVVTQEAKKLKLDQSAEFKTALEQARADAAKQGADKKATFKTEWAVFENDLLGQAFA 125 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 +V+ +++ N +E + ++ N + + + Sbjct: 126 AHIVRQ---NPIQEKDVKAAYNDFSNFYKGTQEVQLGEIVTDSSSNAQKAIADLDAKKS- 181 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN-PYVT 263 + D + V + + P + + + T P Sbjct: 182 FVSVLNQYSIDEAAKKAGGIPKAYVPLKDL----QESAPPLYAAVKDLKKGAHTKTPLQN 237 Query: 264 QKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + D+R+ + A K + +++ + A I Sbjct: 238 GNLYAVFYVNDRRNVTVPSYEASKNEIGNDLQAARVDAAIQSLL----KKASIK 287 >gi|288934468|ref|YP_003438527.1| nitrogen fixation protein NifM [Klebsiella variicola At-22] gi|255761121|gb|ACU32721.1| nitrogen fixation protein NifM [Klebsiella variicola At-22] Length = 266 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 11/163 (6%), Positives = 40/163 (24%), Gaps = 3/163 (1%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + R + +Q + + + Sbjct: 98 IASQAPRPDPAAVQAWYLRHQAQFMRPEQRLTRHLLLTVDGDDQTVYSRIRELHGQIEAS 157 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 ++ + + G ++ L + L ++N + P ++ G I Sbjct: 158 REAFAPLAQRHSHCPSALDGGLLGWIGRGLLYPQLEEALFALAENALSAPVASELGWHLI 217 Query: 271 AICDKRDLGGEIALK--AYLSAQNTPTKIEKHEAEYVKKLRSN 311 R + + +H+ +++ ++ + Sbjct: 218 WCEAIRPAAPMTPEQALESARDYLSQQSQRRHQRQWLAEMLAR 260 >gi|288575825|ref|ZP_05977675.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] gi|288566815|gb|EFC88375.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] Length = 298 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 30/292 (10%), Positives = 75/292 (25%), Gaps = 11/292 (3%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET 84 F +++ S ++ ++ T+NG+ I I ++A L+ + + QEL Sbjct: 14 FTAALVMAALSGSLFAQTLVTVNGQAIDSSVIDGQVAALRAENKQIQDSPQLRQELTNRQ 73 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 + I + + + + D + + Sbjct: 74 VISTVIAQEAKRRKLDQSAE----FKKALEQARADAKKQGADKKPSFKTEWAAFEDDLLG 129 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 + + N + + + K + + + + Q K K Sbjct: 130 QALAIDVLRKNPVNEQEIKKSYDEFAKFYQGSQEVRLREIVTRTKADGQKAAADLKAKKA 189 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN-TTNPYVT 263 + D + V + + P + + + T+ P Sbjct: 190 FTAVLKQYSIDEEAKKAGGIPQAYVPLKDL----QEAAPPLYAAVKDLKKGEATSEPLQD 245 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + D+RD+ + + ++ L A I Sbjct: 246 GNSYAVFYVDDRRDVKV--PAFNEIKGSMARDLSTARIDDTMRALLQKADIK 295 >gi|300728336|ref|ZP_07061701.1| ppic-type ppiase domain protein [Prevotella bryantii B14] gi|299774401|gb|EFI71028.1| ppic-type ppiase domain protein [Prevotella bryantii B14] Length = 476 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 27/285 (9%), Positives = 77/285 (27%), Gaps = 33/285 (11%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + + + + + + + I G ++ + Sbjct: 3 IYALLTAMLLNGGMVFGQTDPVIMKIAGRPVSRSEFEYSYN------------------- 43 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 S D ++ + + LD F+ Y Sbjct: 44 ---------KNNSASVIDKKSIVDYVDLFINYKLKVKAAEDAHLDTLTSFQKEFESYRDQ 94 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q + + + + + +Q++ N +L + + V+ Sbjct: 95 QVRPSFITEAEVEAEA---HKIYESERQRIDNNGGMIRPSHILLLLKQNAPAKAAEIVKN 151 Query: 201 RIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT 258 RI + + +K++ V G ++++ + +F+++ + + Sbjct: 152 RIDSIYNALKKGANFQELAKKYSDDKGSAVQGGLLPWIVKGQTYKEFEDVAYSMKKGEMS 211 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 P+ + G I + DK +LK + I + + Sbjct: 212 KPFSSPAGYHIILMTDKGKFFSYDSLKNNIYRFIEQRGIREQIID 256 >gi|241759275|ref|ZP_04757381.1| conserved hypothetical protein [Neisseria flavescens SK114] gi|241320411|gb|EER56708.1| conserved hypothetical protein [Neisseria flavescens SK114] Length = 289 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 29/292 (9%), Positives = 82/292 (28%), Gaps = 12/292 (4%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET 84 F +++ S + ++ T+NG+ I I ++A ++ N + Q L Sbjct: 6 FASALMLALTSGTLFAQTLVTVNGQAIDSSVIDDQVASVRASNPNVQDTPELRQMLTERQ 65 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 + + + + F + +A+ + F+ L Q+ Sbjct: 66 IISTVVTQEAKKLKLDQSAEFKTALEQARADAAKQGADKKATFKTEWAVFENDLLGQAFA 125 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 +V+ +++ N +E + ++ + + K+ Sbjct: 126 AHIVRQ---YPVQEKDVKAAYNDFSNFYKGTQEVQLGEIVTDSSNAQKAIADLDAKKSFV 182 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN-PYVT 263 + ++ + + K + + + P + + + T P Sbjct: 183 SVLNQYSIDEAAKKAGGIPKAY--IPLKDL----QESAPPLYAAVKDLKKGAHTKTPLQN 236 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + D+R++ + ++ L A I Sbjct: 237 GNLYAVFYVNDRRNVTV--PSYEAAKNEIGSDLQAARVDAAIQSLLKKASIK 286 >gi|116786570|gb|ABK24159.1| unknown [Picea sitchensis] Length = 142 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 28/103 (27%), Gaps = 2/103 (1%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R +L + + + + ++ + +++ G Sbjct: 41 TYVKARHILCEKQGKINEAYKKL-QDGWLSNGDKVPPAEFAKVAAEYSECPSGKKGGDLG 99 Query: 236 YLLESDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + P + T+ P+ + G I +++ Sbjct: 100 FFPRGKMAGPFQEVAFNTPVGATSAPFKSTHGYHIILAEGRKN 142 >gi|213521163|gb|ACJ50520.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas fluorescens] Length = 279 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 22/170 (12%), Positives = 52/170 (30%), Gaps = 16/170 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISKR 59 M + + +I ++ + I + + +++ +NGE IT ++S+ Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIVALMAFTGIEAIFQASGNNKQDVAKVNGEEITQTELSQA 60 Query: 60 IALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 + + + Q + L A++ LI L Q S F ++ Sbjct: 61 VDMQRRQLMQQLGKDFDASLLDEKLLRDAALKGLIDRKLLLQGAADSKFGFSEAALDQVI 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 +Q + F Q+ Q + +++ Sbjct: 121 LQTPEFQVDGKFNAERFDQVVRQLGYSRLQF--RQMLTQEMLIGQVRAGI 168 >gi|320167884|gb|EFW44783.1| peptidyl-prolyl cis-trans isomerase [Capsaspora owczarzaki ATCC 30864] Length = 179 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 9/91 (9%), Positives = 23/91 (25%), Gaps = 1/91 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + + + + + + + S G + Sbjct: 85 RPSSWKTQNITRTRDEALAMIQQWRAQIVNKEKTFADIAKVESDCSSAKSGGDLGFFGPG 144 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + F++ + P T GV I Sbjct: 145 QMQAPFEHATFALQVGELSEPVFTDSGVHII 175 >gi|24372226|ref|NP_716268.1| peptidyl-prolyl cis-trans isomerase C [Shewanella oneidensis MR-1] gi|24346144|gb|AAN53713.1|AE015510_6 peptidyl-prolyl cis-trans isomerase C [Shewanella oneidensis MR-1] Length = 92 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 8/75 (10%), Positives = 24/75 (32%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + ++++S G + PQF + + Sbjct: 15 KEQAEDIIKQLNNGANFGALAKRYSSCPSAKKGGDLGEFKRGQMVPQFDKVAFSGELLVP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G + + Sbjct: 75 HLVKTKFGWHVVKVL 89 >gi|116620016|ref|YP_822172.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Solibacter usitatus Ellin6076] gi|116223178|gb|ABJ81887.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Solibacter usitatus Ellin6076] Length = 313 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 18/314 (5%), Positives = 75/314 (23%), Gaps = 38/314 (12%) Query: 15 LLTTYFVLIIFCIVPIVSYKSW--------AMSSRIRTTI-NGEVITDGDISKRIALLKL 65 + + ++ C+ + + + +G +T + + L Sbjct: 1 MKASSLCILFLCLGAAWAQTAAPPPATLPDVPDDTVIAIFGDGTKLTMAEFKRIYNALPP 60 Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 L A + + + +++ K + + + Sbjct: 61 ANQQMALRDRA--QWLHQWEMMRKLTKMAEQAKLDQESPYKEAIDYGRMNVLATAQITAT 118 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + + + S + Y + A+ K K Sbjct: 119 VNAMTVEPAEIVKSYDSNKQKYTQVKVKAIYVAFSDDAAASTTKGKKPLTE--------- 169 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLL-ESDLH 243 + +++ + + +++ + G L ++ Sbjct: 170 ----------AEAKAKVEKLKAALKGGADFVKLVKENSDDETSREKGGDFATLRYTDNIP 219 Query: 244 PQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 F+ + + + + P G + R ++ + + Sbjct: 220 DAFRAAVFALKKGDVSEPLKQPNGFYLL-----RAEEVTVSPLSEVRDDIYNQLKNDRAT 274 Query: 303 EYVKKLRSNAIIHY 316 +++ ++ ++ + Sbjct: 275 QWLDQVNRDSKVQI 288 >gi|254779354|ref|YP_003057459.1| hypothetical protein HELPY_0712 [Helicobacter pylori B38] gi|254001265|emb|CAX29242.1| Conserved hypothetical protein [Helicobacter pylori B38] Length = 420 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 85/290 (29%), Gaps = 35/290 (12%) Query: 32 SYKSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 + + + ++ +NG IT I + Q+ + + A LI E +K Sbjct: 154 NATNNTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKN 207 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 QEIE+ I D + ++ A+ G+ + F L +G ++ L ++ Sbjct: 208 QEIERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQEL 266 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 ++N + E + K+ ++ Sbjct: 267 LRNILLTNVDTSS-ETKMREYYNKHKEQFSIPTEIETVRYTSTSQEDLERAMADPNLEIP 325 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 + + +++ Q + Q + T G Sbjct: 326 GVSKANEKIE--------------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQ 365 Query: 268 EY---IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I ++ K +++ + +K E+ +KLR + I Sbjct: 366 FITFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 415 >gi|94313616|ref|YP_586825.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Cupriavidus metallidurans CH34] gi|93357468|gb|ABF11556.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Cupriavidus metallidurans CH34] Length = 291 Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 40/331 (12%), Positives = 80/331 (24%), Gaps = 59/331 (17%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPI----VSYKSWAMSSRIRTTINGEVITDGDI 56 M + + LS +L + S + +NG I + Sbjct: 1 MNAIALSRLSGPARLALGLMLAACLAPCQAADDSGSGAGTGLPPGTLAVVNGVPIAQTQL 60 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 + + + Q ++ + QELIV + +Q EK G V A Sbjct: 61 DDALRVAR-QADTPQMRQFFTQELIVREVLRQSAEKDGYDRRPEVVQAANTAKAS----- 114 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + + + L + I VK + + E + Sbjct: 115 -----------AEAELYLRDNLRLDPITDAQVKARYDEVVSMMGKEEYKVRIISVAD--- 160 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + + E + ++ G+ + Sbjct: 161 ----------------------DRTARTVLEKLRAGVSFDELVRMYSVASSKEGGGEMPW 198 Query: 237 LL----------ESDLHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKR--DLGGEIA 283 + + + + T P V + + KR + Sbjct: 199 ITFRVPVVEGKSQGVPVAVAEAVSHLEVGAVTQEPVVVDNLRVIVRLDAKRATQVPAFDD 258 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +K + Q + K A+ V L A I Sbjct: 259 VKDDIRRQLHIVALNKARADVVGNLMQAATI 289 >gi|254284340|ref|ZP_04959308.1| putative peptidyl-prolyl cis-trans isomerase D [gamma proteobacterium NOR51-B] gi|219680543|gb|EED36892.1| putative peptidyl-prolyl cis-trans isomerase D [gamma proteobacterium NOR51-B] Length = 620 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 25/286 (8%), Positives = 71/286 (24%), Gaps = 23/286 (8%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAV--QELIVETLKKQEIEKSGITFDSNTVNYF 105 GE IT + +R + + L + + + + + + Sbjct: 111 GEEITAIEAFQRDGVFSPDQYKSVLANAGLTPERFRRMQSQDLMLSQLQGAISQSAFVSP 170 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD-----------------VV 148 A + E +L+ + + ++ Sbjct: 171 SEMEAAAKVWAEERDVRYLEAPLSDFDRPDSVDEAEIAEYYDNNQDRFVTEPAANVGYIL 230 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 E + + +++ R I ++ + R+ + Sbjct: 231 LAVEDFYEPVDEALVREQFEAVRDEYEVADQSRVSHILIIESDEDSDTSYADRVGEVARR 290 Query: 209 RLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKG 266 + + + S G+ + + + + S + P T G Sbjct: 291 LDAGEDFGQLAMELSDDVGSAGSGGELGFTDGTAFPEPMEEAIASLSVGAYSGPVETDAG 350 Query: 267 VEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 +I + ++ + L+ L + E+ V +L+ Sbjct: 351 THFIRVEERVAGERPDFATLREELEQAIKISNAERDLLLAVDELKD 396 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 21/210 (10%), Positives = 50/210 (23%), Gaps = 16/210 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + + +++ F + S + +NGE I+ ++ IA K Sbjct: 1 MREGAKSTAAKIVIGLIVLSFAAFGLESLLPGGSGTS-VAEVNGEEISPAELQNAIASQK 59 Query: 65 LQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 Q + A++ LI L Q G+ + + Sbjct: 60 RQLTQIFGDRIDPAMLDDERIRPSALEGLIERKLLLQHAVDLGMIASAQAIGEEITAIEA 119 Query: 112 NTGLSAEDFSSFLD--KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + + + Q + ++ E+ A + Sbjct: 120 FQRDGVFSPDQYKSVLANAGLTPERFRRMQSQDLMLSQLQGAISQSAFVSPSEMEAAAKV 179 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 YL + + + + Sbjct: 180 WAEERDVRYLEAPLSDFDRPDSVDEAEIAE 209 >gi|301104932|ref|XP_002901550.1| PpiC-type peptidyl-prolyl cis-trans isomerase, putative [Phytophthora infestans T30-4] gi|262100554|gb|EEY58606.1| PpiC-type peptidyl-prolyl cis-trans isomerase, putative [Phytophthora infestans T30-4] Length = 148 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 27/85 (31%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + +K+ + + ++ + G + P+F + + Sbjct: 48 ECDEILKELQAADDLESTFARLAKERSKCPSSRQGGDLGSFGRGQMVPEFDTVAFEKPVG 107 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGE 281 + TQ G + I D+ +G E Sbjct: 108 EVHKVKTQFGWHLVLINDRSGMGDE 132 >gi|288817631|ref|YP_003431978.1| hypothetical protein HTH_0310 [Hydrogenobacter thermophilus TK-6] gi|288787030|dbj|BAI68777.1| hypothetical protein HTH_0310 [Hydrogenobacter thermophilus TK-6] gi|308751229|gb|ADO44712.1| Formiminotransferase domain protein [Hydrogenobacter thermophilus TK-6] Length = 444 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 33/325 (10%), Positives = 89/325 (27%), Gaps = 22/325 (6%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI---ALLK 64 +L FI + + ++ ++ + +NG IT D + + + ++ Sbjct: 10 TLLVFIVTVASG-AFFLWLFFTGSVRDITSVGKKCVAEVNGSCITLRDYRRELLRFSNIQ 68 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + + ++K ++ LI + L Q+ G V S + Sbjct: 69 SRDLEEVIKKQVIENLITQELLYQKARSLGFYASDEEVVSVIKSDPTFQEGGVFSASKYK 128 Query: 125 DKQGIGDNHF--KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-- 180 + + + + + E E N + + I Sbjct: 129 EMLARLGLEPGEYEDYIRRMLTVQKLLALVSNSVYLSEAEKNINLAVQSTLLSGKLYIIT 188 Query: 181 ----RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + + ++ + E+ +R+ + +K + + Q Sbjct: 189 PSDVEVSYTPTQEEMMSFYEKNKELFRRPEKKLVRVWAEKDKAKVEEIYRAIKEGKQVQG 248 Query: 237 LLESDLHPQFQNLLKKSQNNTT------NPYVTQKG--VEYIAICDKRDLG--GEIALKA 286 E L L K + + VT++G + + G +K Sbjct: 249 YTEYLLPDDANRLPKGVSSEVSKLDQKDGILVTKEGDEYLIVYLYRVEPAGIRSFEEVKE 308 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSN 311 + + + + +++ Sbjct: 309 QIRSALIDKRKASLLRDKAQEIYKR 333 Score = 38.1 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 22/267 (8%), Positives = 64/267 (23%), Gaps = 17/267 (6%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 +IT D+ ++ Q+ + + K + + + Sbjct: 186 IITPSDVE--VSYTPTQEEMMSFYEKNKELFRRPEKKLVRVWAEKDKAKVEEIYRAIKEG 243 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + G + ++ D + + + +V + + + Sbjct: 244 KQVQGYT--EYLLPDDANRLPKGVSSEVSKLDQKDGILVTKEGDEYLIVYLYRVEPAGIR 301 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + + + KR+ + ++ ++ Sbjct: 302 SFEEVKEQIRSALIDKRKASLLRDKAQEIYKRLTEGKDVSVKYLTF--------EDTPVD 353 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 I + E + + PY +G I D++ + L+ Sbjct: 354 QIMSIAKVKEGQVVSFILSKQ-----KVFGPYELSQGYGVFVITDRKKKPADEEEIKKLT 408 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + ++ L +A I Sbjct: 409 QDILNMKSDATVNYLIEHLIRSAKIKI 435 >gi|124004173|ref|ZP_01689019.1| putative exported isomerase [Microscilla marina ATCC 23134] gi|123990243|gb|EAY29742.1| putative exported isomerase [Microscilla marina ATCC 23134] Length = 777 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 18/157 (11%), Positives = 48/157 (30%), Gaps = 4/157 (2%) Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL-QNQGFVQKRIKDAEESRLRLPKDCN 217 + ++ ++ + E + +L + Q+ +I + ++ L Sbjct: 117 DKAKVEELVREAYDRLKEEVRVSHILVKVDKEAEPQDTVVAYNKILELRKTVLNGKSFEQ 176 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR 276 + G Y + F+N + + ++ T+ G ++ + D+R Sbjct: 177 VASTHSQSPSAKQGGNIGYFTALQMVYPFENASYQTQVGSISDLLRTKFGYHFLKVTDRR 236 Query: 277 DLGGEIALKAYLSAQN--TPTKIEKHEAEYVKKLRSN 311 G+I + Q K + K+ Sbjct: 237 KASGKIQTAHIMIMQPAKANAKDSIEAKRKIDKIYER 273 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 16/200 (8%), Positives = 53/200 (26%), Gaps = 5/200 (2%) Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 ++ S+ + ++ + + Sbjct: 181 HSQSPSAKQGGNIGYFTALQMVYPFENASYQTQVGSISDLLRTKFGYHFLKVTDRRKASG 240 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKA 234 + ++ ++ +++I E +F+ G Sbjct: 241 KIQTAHIMIMQPAKANAKDSIEAKRKIDKIYERLKAGEDWDKLCRQFSEDQPSKNKGGVL 300 Query: 235 QYLLESDLHPQFQNLLKK--SQNNTTNPYVTQK-GVEYIAICDKRDLGGEIALKAYLSAQ 291 + P+F+ + + + P T G I + KR L ++ ++ + Sbjct: 301 PEFGVGEAIPEFEQASFQLKEVGDFSKPVYTPYSGWHIIKLMKKRTLDTFTEVEPFIRQK 360 Query: 292 N-TPTKIEKHEAEYVKKLRS 310 ++++ ++ KL+ Sbjct: 361 VAKDSRLKVTHRSFIAKLKK 380 >gi|59713880|ref|YP_206655.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Vibrio fischeri ES114] gi|197337353|ref|YP_002158333.1| peptidyl-prolyl cis-trans isomerase C [Vibrio fischeri MJ11] gi|59482128|gb|AAW87767.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Vibrio fischeri ES114] gi|197314605|gb|ACH64054.1| peptidyl-prolyl cis-trans isomerase C [Vibrio fischeri MJ11] Length = 92 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 10/75 (13%), Positives = 27/75 (36%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + + K +K++S G + + PQF + + Sbjct: 15 KEQAEDIIQQLKKGAKFHVLAKKYSSCPSGKRGGDLGEFKKGQMVPQFDKVCFSGETLVP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G + + Sbjct: 75 HLVKTKFGWHVVKVL 89 >gi|39995929|ref|NP_951880.1| peptidyl-prolyl cis-trans isomerase C [Geobacter sulfurreducens PCA] gi|39982693|gb|AAR34153.1| peptidyl-prolyl cis-trans isomerase C [Geobacter sulfurreducens PCA] Length = 92 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 22/78 (28%), Gaps = 1/78 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNT 257 + + + + + + G + + +F +++ N Sbjct: 14 EAECLQLKAEIEAGAEFADVARQHSLCPSRAQGGDLGTFTQGQMVKEFDDIVFSGEINKV 73 Query: 258 TNPYVTQKGVEYIAICDK 275 P TQ G I I + Sbjct: 74 LGPVRTQFGYHLIEITKR 91 >gi|113968969|ref|YP_732762.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-4] gi|113883653|gb|ABI37705.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-4] Length = 92 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 8/75 (10%), Positives = 25/75 (33%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + + ++++S G + PQF + + Sbjct: 15 KEQAEDIIKQLNKGANFGALAKRYSSCPSAKKGGDLGEFKRGQMVPQFDKVAFSGELLVL 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G + + Sbjct: 75 HLVKTKFGWHVVKVL 89 >gi|91228750|ref|ZP_01262661.1| peptidyl-prolyl cis-trans isomerase C [Vibrio alginolyticus 12G01] gi|153838954|ref|ZP_01991621.1| peptidyl-prolyl cis-trans isomerase C [Vibrio parahaemolyticus AQ3810] gi|254229070|ref|ZP_04922490.1| peptidyl-prolyl cis-trans isomerase C [Vibrio sp. Ex25] gi|260903134|ref|ZP_05911529.1| foldase protein PrsA [Vibrio parahaemolyticus AQ4037] gi|262396656|ref|YP_003288509.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio sp. Ex25] gi|269966089|ref|ZP_06180179.1| peptidyl-prolyl cis-trans isomerase C [Vibrio alginolyticus 40B] gi|91187696|gb|EAS74017.1| peptidyl-prolyl cis-trans isomerase C [Vibrio alginolyticus 12G01] gi|149747588|gb|EDM58518.1| peptidyl-prolyl cis-trans isomerase C [Vibrio parahaemolyticus AQ3810] gi|151938361|gb|EDN57199.1| peptidyl-prolyl cis-trans isomerase C [Vibrio sp. Ex25] gi|262340250|gb|ACY54044.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio sp. Ex25] gi|269829236|gb|EEZ83480.1| peptidyl-prolyl cis-trans isomerase C [Vibrio alginolyticus 40B] gi|308107784|gb|EFO45324.1| foldase protein PrsA [Vibrio parahaemolyticus AQ4037] gi|328470253|gb|EGF41164.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Vibrio parahaemolyticus 10329] Length = 92 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 25/77 (32%), Gaps = 4/77 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + + K +K+++ G + PQF + Sbjct: 15 KEQAEDIIKQLKKGAKFQTLAKKYSTCPSGKRGGDLGEFRRGQMVPQFDKV--CFSGEVL 72 Query: 259 NP--YVTQKGVEYIAIC 273 P T+ G + + Sbjct: 73 TPHLVKTKFGWHVVKVL 89 >gi|291238039|ref|XP_002738936.1| PREDICTED: CG11858-like [Saccoglossus kowalevskii] Length = 131 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 27/87 (31%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 ++ +A E + K++ G ++ + FQ+ + Sbjct: 46 EKHSKVMEAMEKLKAGERFNEVATKYSED-KARQGGDLGWMTRGSMVGPFQDAAFALSPS 104 Query: 257 TTN-------PYVTQKGVEYIAICDKR 276 TT P T+ G I I K+ Sbjct: 105 TTGNPVYTDPPVKTKFGYHIIMIEGKK 131 >gi|91079624|ref|XP_967576.1| PREDICTED: similar to dodo [Tribolium castaneum] gi|270004471|gb|EFA00919.1| hypothetical protein TcasGA2_TC003825 [Tribolium castaneum] Length = 159 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 11/104 (10%), Positives = 24/104 (23%), Gaps = 1/104 (0%) Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 Q + + R + + ++ E+ + K++ Sbjct: 52 QCSHLLVKHKDSRRPSSWREENITRTKDEALELVKSYREQIVQGKASFADLASKYSDCSS 111 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 G + F+ + P T GV I Sbjct: 112 AKRGGDLGSFKRGAMQKPFEEASFALKVGELSEPVFTDSGVHII 155 >gi|88803462|ref|ZP_01118988.1| PPIC-type PPIASE domain protein [Polaribacter irgensii 23-P] gi|88781028|gb|EAR12207.1| PPIC-type PPIASE domain protein [Polaribacter irgensii 23-P] Length = 544 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 19/167 (11%), Positives = 52/167 (31%), Gaps = 4/167 (2%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + K G + + L + +I + Sbjct: 205 YTTKIGAVSHPFKTQFGFHILKVDDFRTSKGALEVAHILITDTTAVGKSKIAEVYAKIQE 264 Query: 212 LPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVE 268 +F+ + GK + F++ + + + + P+ T+ G Sbjct: 265 NETFEKLAAQFSMDTSSKRNGGKLNKFGIGKMVKPFEDAAFSLQKEGDVSKPFRTRFGWH 324 Query: 269 YIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNAII 314 + + K + + L+A L+ + ++++ E + KL+++ I Sbjct: 325 IVKLLAKYPVKSFLELRAELTDKVKRSSRMQMSETAVINKLKASYSI 371 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 35/300 (11%), Positives = 84/300 (28%), Gaps = 36/300 (12%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + +IF + + + + TIN E+ T D + Sbjct: 1 MKKIVLSICFLIFVL------NLSSQNKKTLVTINNEITTVEDFKRIYEKNL-------- 46 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 A+ +++KK + + R+ + + L + D Sbjct: 47 --DAIDSKEAKSVKKNLTLYIDYRLKVAEAYHLKLDTLRSYQKEIKMYREQLMAPYLQDT 104 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 F L + + + + + + R + Sbjct: 105 TFISDLVKEIYFRTTNEVKAKHILVRTSEDAVPRDTLIAYNKITAIRNRII-------NG 157 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LK 251 ++ V + + + + G Y + F+++ Sbjct: 158 EDFEAVAVAVSEDV-----------SAQDDPRSGRKGNKGDLGYFDAFKMVSSFEDVAYT 206 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++P+ TQ G + + D R G + + A++ +T + AE K++ N Sbjct: 207 TKIGAVSHPFKTQFGFHILKVDDFRTSKGALEV-AHILITDTTAVGKSKIAEVYAKIQEN 265 >gi|294637926|ref|ZP_06716195.1| peptidylprolyl isomerase PrsA2 [Edwardsiella tarda ATCC 23685] gi|291088952|gb|EFE21513.1| peptidylprolyl isomerase PrsA2 [Edwardsiella tarda ATCC 23685] Length = 93 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 17/68 (25%), Gaps = 1/68 (1%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQK 265 + R + + G + P+F + S P T+ Sbjct: 23 QKLRRGANFQALARRHSRCPSKRQGGDLGEFRRGSMVPEFDRAVFSSPLLTPVGPVKTRF 82 Query: 266 GVEYIAIC 273 G I + Sbjct: 83 GYHIIKVL 90 >gi|148234054|ref|NP_001089028.1| peptidylprolyl cis/trans isomerase, NIMA-interacting 1 [Xenopus laevis] gi|50416500|gb|AAH77181.1| LOC503670 protein [Xenopus laevis] gi|77748402|gb|AAI06674.1| LOC503670 protein [Xenopus laevis] Length = 159 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 8/106 (7%), Positives = 28/106 (26%), Gaps = 1/106 (0%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + R + + ++ ++ + + +F+ Sbjct: 50 KVRCSHLLVKHNQSRRPSSWRQDNITRTKDEALELINGYIQKIKSGDEDFESLASQFSDC 109 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + + F++ + P T+ G+ I Sbjct: 110 SSAKAGGDLGSFGKGAMQKPFEDASFALRPGEMSGPVFTESGIHII 155 >gi|282859614|ref|ZP_06268717.1| PPIC-type PPIASE domain protein [Prevotella bivia JCVIHMP010] gi|282587617|gb|EFB92819.1| PPIC-type PPIASE domain protein [Prevotella bivia JCVIHMP010] Length = 377 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 24/273 (8%), Positives = 64/273 (23%), Gaps = 34/273 (12%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 + + ++ ++ ++ A + I TING+ +T + Sbjct: 3 IKMLLLLSMIGLQAIAQTDSIVMTINGKAVTRSEFEYAYQ-------------------- 42 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + K+G + + + + E Sbjct: 43 -------KNNKNGRHIKIANFAKQYALYKQKVAAAEEARLDKTASFNEQVESLLSPTVAP 95 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 P +LE + + + + + + + + + Sbjct: 96 VSIPT-----VSTPSASLEQDARRLYNEERREVEGNGGLVSYGEILIRINQHATAYEEDK 150 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL--LESDLHPQFQNLLKKSQNNTTN 259 + +S R + A K G+ + L + L Sbjct: 151 ARVLADSVYRALQGGADFATLAKKYSQTKGGRVFAVVGRNEVLEEVEKALFSMQAGELRA 210 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292 P + G + + + ++ L Q Sbjct: 211 PVTSPFGFHILKVYAREQYPAYEVVRPRLIKQL 243 >gi|153834526|ref|ZP_01987193.1| peptidyl-prolyl cis-trans isomerase C [Vibrio harveyi HY01] gi|156976478|ref|YP_001447384.1| peptidyl-prolyl cis-trans isomerase C [Vibrio harveyi ATCC BAA-1116] gi|269962816|ref|ZP_06177156.1| peptidyl-prolyl cis-trans isomerase C [Vibrio harveyi 1DA3] gi|148869045|gb|EDL68086.1| peptidyl-prolyl cis-trans isomerase C [Vibrio harveyi HY01] gi|156528072|gb|ABU73157.1| hypothetical protein VIBHAR_05251 [Vibrio harveyi ATCC BAA-1116] gi|269832370|gb|EEZ86489.1| peptidyl-prolyl cis-trans isomerase C [Vibrio harveyi 1DA3] Length = 92 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 25/77 (32%), Gaps = 4/77 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + + K +K+++ G + PQF + Sbjct: 15 KEQAEDIIQQLKKGAKFQTLAKKYSTCPSGKRGGDLGEFRRGQMVPQFDKV--CFSGEVL 72 Query: 259 NP--YVTQKGVEYIAIC 273 P T+ G + + Sbjct: 73 TPHLVKTKFGWHVVKVL 89 >gi|110346942|ref|YP_665760.1| hypothetical protein Meso_4128 [Mesorhizobium sp. BNC1] gi|110283053|gb|ABG61113.1| hypothetical protein Meso_4128 [Chelativorans sp. BNC1] Length = 725 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 18/196 (9%), Positives = 51/196 (26%), Gaps = 15/196 (7%) Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 ++ + + + + + + +I A ++ V R I + Sbjct: 510 ETRLRLLRQMMEQEEVDDRIEVSDEQIQAFYSDNRDRLVSPPKSRIRYVRIGLGSSEADA 569 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIH-----DVSIGKA-QYLLESDLH------- 243 + D +L + A + G+ ++ ES Sbjct: 570 SRARERSDEAYRKLTGAVPGSDFASVAQEYSEDVETASKGGEFPDWIGESGDPLGELMSH 629 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHE 301 P + + P+ + + + ++ K ++ T + Sbjct: 630 PFHEAIQDMEPGKVGKPFELGGSIYIVEVTERTLPQQLTLDEAKPFIEEYLTNQQHRSMA 689 Query: 302 AEYVKKLRSNAIIHYY 317 E ++ A + Y Sbjct: 690 EELQRRQLQEAKVQLY 705 Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 32/341 (9%), Positives = 82/341 (24%), Gaps = 43/341 (12%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAM-----SSRIRTTINGEVITDGDISKRIAL 62 +L ++ + + + Y + + + T G IT DI + + Sbjct: 102 TLGQYVASIFAITTIPAALVFFSSDYFADMTLPSPPAPNVVATFEGGQITLEDIEAHLNM 161 Query: 63 LKLQK-INGELEKIAV----QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 L G + + A+ ++L+ + L + D + + + S Sbjct: 162 LSSSTSNPGPMSQEALLETVEDLVSDQLILRWAANRKPEADESFQHAIKHINENLNLESF 221 Query: 118 EDFSSFLDKQG----IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 D I + + K + V+++ + K Sbjct: 222 ADQLHTERISISESSIREYYDKNKARYEGRSFTEVRDEIRRTLVAEQEPAFVEDYLEKLR 281 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--- 230 T L +P + ++ D + R D + Sbjct: 282 TSASITRSFDLLDVPAPSQKELETYYRQNIDRFKLPRRAIVDELEFSASQFSPKAQQEAA 341 Query: 231 ---IGKAQ---------------YLLESDLHPQFQNLLKKS------QNNTTNPYVTQKG 266 +G + +++ +N + + Sbjct: 342 SALLGIQGGATFQATAGRFSKARFSSRAEVPEGSRNPDWDKYVFALVPGELASVFQAGGS 401 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + + G + A + T + E + Sbjct: 402 YYVVRLQEVMPAGAKS--FAEVRPTIMTTVRTQKEQRWFAD 440 Score = 38.5 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 17/40 (42%) Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + ++ + + +Y++KLR++A I Sbjct: 247 RYEGRSFTEVRDEIRRTLVAEQEPAFVEDYLEKLRTSASI 286 >gi|299529221|ref|ZP_07042666.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas testosteroni S44] gi|298722844|gb|EFI63756.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas testosteroni S44] Length = 263 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 90/278 (32%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG+ + ++ ++ E+EK+ E+I + QE + G+ Sbjct: 29 VAIVNGKAVPMARVNALKTQIEASGQPVVPEMEKMIKDEVIAREIFMQEANRRGLAGSEA 88 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + +DF K + Sbjct: 89 YKQQ-------------------------------MEMARQTVLIRALFDDFRKKNPVTD 117 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E A K + + + +++ + K K E+ + Sbjct: 118 AEAKAEYDKFVAANGGKEYKASHILVESEDRAKAIIAEVKAGKKFEDI----------AK 167 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRD 277 K + G + ++ P+F + L+K + T+ P +Q G I + D+R Sbjct: 168 KESKDPGSGARGGDLDWANPNNYVPEFTEALIKLKKGEMTDAPVKSQFGWHIIRMDDERQ 227 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 E+ + Q T ++ E ++ +LR +A I Sbjct: 228 A--EMPKFEDVKPQITQQLQQQKEQQFQDQLRKSAKIQ 263 >gi|264679103|ref|YP_003279010.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas testosteroni CNB-2] gi|262209616|gb|ACY33714.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas testosteroni CNB-2] Length = 263 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 90/278 (32%), Gaps = 48/278 (17%) Query: 43 RTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG+ + ++ ++ E+EK+ E+I + QE + G+ Sbjct: 29 VAIVNGKAVPMARVNALKTQIEASGQPVVPEMEKMIKDEVIAREIFMQEANRRGLAGSEA 88 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + +DF K + Sbjct: 89 YKQQ-------------------------------MEMARQTVLIRALFDDFRKKNPVTD 117 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E A K + + + +++ + K K E+ + Sbjct: 118 AEAKAEYDKFVAANGGKEYKASHILVESEDRAKAIIAEVKAGKKFEDI----------AK 167 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRD 277 K + G + ++ P+F + L+K + T+ P +Q G I + D+R Sbjct: 168 KESKDPGSGARGGDLDWANPNNYVPEFTEALIKLKKGEMTDAPVKSQFGWHIIRMDDERQ 227 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 E+ + Q T ++ E ++ +LR +A I Sbjct: 228 A--EMPKFEDVKPQITQQLQQQKEQQFQDQLRKSAKIQ 263 >gi|50603672|gb|AAH77447.1| Unknown (protein for IMAGE:4058360) [Xenopus laevis] Length = 158 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 8/106 (7%), Positives = 26/106 (24%), Gaps = 1/106 (0%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + R + ++ ++ + + +F+ Sbjct: 49 KVRCSHLLVKHNQSRRPSSWRQDKITRSKDEALELINGYIQKMKSGDEDFESLASQFSDC 108 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + + F++ + P T G+ I Sbjct: 109 SSAKAGGDLGSFGKGAMQKPFEDASFALRPGEMSGPVFTDSGIHII 154 >gi|148227870|ref|NP_001084236.1| prolyl isomerase Pin1 b [Xenopus laevis] gi|7259613|gb|AAF43897.1|AF239760_1 prolyl isomerase Pin1 [Xenopus laevis] Length = 159 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 8/106 (7%), Positives = 26/106 (24%), Gaps = 1/106 (0%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + R + ++ ++ + + +F+ Sbjct: 50 KVRCSHLLVKHNQSRRPSSWRQDKITRSKDEALELINGYIQKMKSGDEDFESLASQFSDC 109 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + + F++ + P T G+ I Sbjct: 110 SSAKAGGDLGSFGKGAMQKPFEDASFALRPGEMSGPVFTDSGIHII 155 >gi|42520635|ref|NP_966550.1| peptidyl-prolyl cis-trans isomerse D, putative [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410374|gb|AAS14484.1| peptidyl-prolyl cis-trans isomerse D, putative [Wolbachia endosymbiont of Drosophila melanogaster] Length = 602 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 29/377 (7%), Positives = 81/377 (21%), Gaps = 77/377 (20%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ- 66 ++ +F +T + + + I + S + EVIT + Q Sbjct: 2 NVKNFFTKVTVVLLACLLIFMGIGNLLSGDDEKEEVARVGKEVITSDEYKSLYQNYGKQI 61 Query: 67 -------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 + +L+ + LI + L + G+T ++ E Sbjct: 62 SGSDASREQVKKLKYDLLNGLIEQKLLFNLTSELGLTVGEESIKNHIKNTKYFQNDKGEF 121 Query: 120 -----------------------------FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 + I+ + Sbjct: 122 DKNKFYETLNDLHMTEKEYIAKLEKVLPAMMFMTSLFKDNYPVTFGEKIDEQIYKSRYQT 181 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD------ 204 + E + + + Y F P+ + + ++ + Sbjct: 182 RVVDIVKITEDAVTNIPEPDDQALLDLYERNKSHFYYPEYRTAQYISLGQKYFEDQIKIS 241 Query: 205 ---------AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--------- 246 +E + + + + +F Sbjct: 242 DEEVDGIIEQQELKNQRDIFNAIFSTKEEAETARRAFEEGKTSFEQIVEEFGKAKLEETR 301 Query: 247 --------------QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSA 290 + + + + G + + + E LK + + Sbjct: 302 VNNITKDFLPEDVREKVFALKVGEVSEVLASSFGWHIVKVESAHQISDEDLVDLKKDIKS 361 Query: 291 QNTPTKIEKHEAEYVKK 307 T K + +++ + Sbjct: 362 VLTNQKSFERVNDFINQ 378 >gi|308388554|gb|ADO30874.1| hypothetical protein NMBB_0386 [Neisseria meningitidis alpha710] gi|325136920|gb|EGC59517.1| hypothetical protein NMBM0579_0318 [Neisseria meningitidis M0579] Length = 288 Score = 59.3 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 30/301 (9%), Positives = 78/301 (25%), Gaps = 17/301 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + + S + T+NG+ I I ++A + + E Sbjct: 1 MKAKILTSVALLACSGSLFAQT-----LATVNGQKIDSSVIDAQVAAFRAENSRAEDTPQ 55 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 Q L+ + + + + F A+ + + K Sbjct: 56 LRQSLLENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDDKKPSFKTVWQAVK 115 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + E E+ A + ++ + + Sbjct: 116 YG-----LNGEAYALHIAKTQPVSEQEVKAAYDNISGFYKGTQEVQLGEILTDKEENAKK 170 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 + K ++ L+ ++ ++ + + V + E + P ++ + + Sbjct: 171 AVADLKAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDL----EQGVPPLYRAIKDLKKG 226 Query: 256 NTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T P + D R++ + Q + V L A I Sbjct: 227 EFTATPLKNGDFYGVYYVNDSREVKV--PSFDEMKGQIAGNLQAERIDRAVGALLGKANI 284 Query: 315 H 315 Sbjct: 285 K 285 >gi|308184447|ref|YP_003928580.1| hypothetical protein HPSJM_03355 [Helicobacter pylori SJM180] gi|308060367|gb|ADO02263.1| hypothetical protein HPSJM_03355 [Helicobacter pylori SJM180] Length = 400 Score = 59.3 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 88/288 (30%), Gaps = 35/288 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 136 AGSTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 189 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 190 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 248 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + + NQ +++ + + Sbjct: 249 NILLTNVDTSSETKMREYYNKHKEQFSIPTEIETVRY----TSTNQEDLERAMSNPNLEV 304 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 + K K+E +++ Q + Q + T G Sbjct: 305 PGVSKANEKIE-----------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQFI 347 Query: 270 ---IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I ++ K +++ + +K E+ +KLR + I Sbjct: 348 TFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 395 >gi|296272834|ref|YP_003655465.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Arcobacter nitrofigilis DSM 7299] gi|296097008|gb|ADG92958.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Arcobacter nitrofigilis DSM 7299] Length = 95 Score = 59.3 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 9/73 (12%), Positives = 25/73 (34%), Gaps = 1/73 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQ 264 E+ E+++ G+ + + +F++++ + P T+ Sbjct: 23 EQIISGDLDFVEAAEQYSLCPSGDQGGELGTFGKGQMVKEFEDVVFSAPVGEIQGPVQTE 82 Query: 265 KGVEYIAICDKRD 277 G I + + D Sbjct: 83 FGYHLIEVTSRND 95 >gi|254883666|ref|ZP_05256376.1| LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 4_3_47FAA] gi|254836459|gb|EET16768.1| LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 4_3_47FAA] Length = 344 Score = 59.3 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 19/208 (9%), Positives = 61/208 (29%), Gaps = 11/208 (5%) Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 E + +K + ++ + E+ + + ++ Sbjct: 1 EKVEEYYNKTSTQIREMLRENIRDGKTVQKMQQQIVGDIKITPAEVRRYFKDLPQDSIPF 60 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI-----G 232 + + I Q +++ K + R+ A + G Sbjct: 61 IPTQVEVQIITMEPKIPQEEIERVKKTLRDYTERVTSGEIAFSTLARLYSEDEGSRRRGG 120 Query: 233 KAQYLLESDLHPQFQN--LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 + ++ ++L P++ N + N + ++ G I + +KR G+ ++ Sbjct: 121 ELGFMGRAELVPEYANVAFNLQDPNKVSKIVESEFGFHIIQLIEKR---GDRINTRHILL 177 Query: 291 QNT-PTKIEKHEAEYVKKLRSNAIIHYY 317 + K + + + ++ + Sbjct: 178 KPKVDEKDLEAALLRLDSIANDIRNEKF 205 >gi|323494654|ref|ZP_08099757.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Vibrio brasiliensis LMG 20546] gi|323311087|gb|EGA64248.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Vibrio brasiliensis LMG 20546] Length = 92 Score = 59.3 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 26/75 (34%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + + K +K+++ G + PQF + + Sbjct: 15 KEQAEDIIKQLKKGAKFQTLAKKYSNCPSGKRGGDLGEFKRGQMVPQFDKVCFSGETLVP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G + + Sbjct: 75 HLVKTKFGWHVVKVL 89 >gi|120599379|ref|YP_963953.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. W3-18-1] gi|146292625|ref|YP_001183049.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella putrefaciens CN-32] gi|120559472|gb|ABM25399.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. W3-18-1] gi|145564315|gb|ABP75250.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella putrefaciens CN-32] gi|319425929|gb|ADV54003.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella putrefaciens 200] Length = 92 Score = 59.3 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 8/78 (10%), Positives = 24/78 (30%), Gaps = 1/78 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +++ + ++ + +S G+ + +F + + N Sbjct: 14 EEQCQALKQQIIDGADFAQIARAHSSCPSGAQGGELGSFGPGMMVREFDEVVFSAPLNEV 73 Query: 258 TNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 74 QGPVKTQFGYHLLEVTSR 91 >gi|325132900|gb|EGC55577.1| hypothetical protein NMBM6190_0280 [Neisseria meningitidis M6190] Length = 288 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 78/301 (25%), Gaps = 17/301 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + + S + T+NG+ I I ++A + + E Sbjct: 1 MKAKILTSVALLACSGSLFAQT-----LATVNGQKIDSSVIDAQVAAFRAENSRAEDTPQ 55 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 Q L+ + + + + F A+ + + K Sbjct: 56 LRQSLLENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDDKKPSFKTVWQAVK 115 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + E E+ A + ++ + + Sbjct: 116 YG-----LNGEAYALHIAKTQPVSEQEVKAAYDNISGFYKGTQEVQLGEILTDKEENAKK 170 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 R K ++ L+ ++ ++ + + V + E + P +Q + + Sbjct: 171 AVADLRAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDL----EQGVPPLYQAIKDLKKG 226 Query: 256 NTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T P + D R++ + Q + V L A I Sbjct: 227 EFTATPLKNGDFYGVYYVNDSREVKV--PSFDEMKGQIAGNLQAERIDRAVGALLGKANI 284 Query: 315 H 315 Sbjct: 285 K 285 >gi|110639640|ref|YP_679850.1| peptidyl-prolyl cis-trans isomerase [Cytophaga hutchinsonii ATCC 33406] gi|110282321|gb|ABG60507.1| peptidyl-prolyl cis-trans isomerase [Cytophaga hutchinsonii ATCC 33406] Length = 697 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 13/135 (9%), Positives = 35/135 (25%), Gaps = 10/135 (7%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 + + + + + +K+ + ++ + G + + Sbjct: 343 HILFRTNETDPAEKKAEAKKQAQQILAEIQNGASFEKMAAQYGGDGTAANGGDLGWFGKG 402 Query: 241 DLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 + F+N + N TQ G I + + + + K Sbjct: 403 QMVKPFENAIFGASKPGLLPNIVETQFGYHIIRVDVAKTGRKFLIA--------SVQKNV 454 Query: 299 KHEAEYVKKLRSNAI 313 + V + NA Sbjct: 455 EAFDNTVDSIYRNAD 469 Score = 37.0 bits (83), Expect = 3.9, Method: Composition-based stats. Identities = 38/376 (10%), Positives = 96/376 (25%), Gaps = 61/376 (16%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + +K+ + + +L + ++ + I+G IT + K I Sbjct: 3 IFNKINQRSGLVVGTIVAGLLLFLLGDAFTSKNSFFSSFNNKVGEIDGSNITVEEFQKEI 62 Query: 61 ----ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 AL N ++ +A +L+ E + K EK+GI + + Sbjct: 63 TKAEALYGGNGNNANMDDLAWTQLVFERVNKVVYEKAGIEISEGEKVDLLEGEHMSDVVK 122 Query: 117 AE--------------DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE-- 160 + D ++ + + ++ + +++ + E Sbjct: 123 QQFGSAEQLKQFLKYLDSDQIQSEEERASIKGRWRALKEYVYNERMRSKYETIIKKSEYV 182 Query: 161 --MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 E + + EY+ ++ +K + + Sbjct: 183 TKAEAKRYYHALNDKAEAEYVYVPYFSINDTTITVTDAMLEDYLKAHKNEFEVEAGRSIE 242 Query: 219 LEKFASKIHDVSIG-------------------------------KAQYLLESDLHPQFQ 247 F + V Y+ + L P Sbjct: 243 FAVFNNVPTGVDSSYVKKDLAELKDEFVLAKNDSAFIRSNSDAPADPSYVQLNQLPPALA 302 Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-----SAQNTPTKIE--K 299 + ++ P+ G I +A +++ K E K Sbjct: 303 ARVNSLQIDSVYGPFSYGTGYSLTKILKIESDTNVMAKASHILFRTNETDPAEKKAEAKK 362 Query: 300 HEAEYVKKLRSNAIIH 315 + + ++++ A Sbjct: 363 QAQQILAEIQNGASFE 378 >gi|303283972|ref|XP_003061277.1| peptidyl-prolyl cis-trans isomerase [Micromonas pusilla CCMP1545] gi|226457628|gb|EEH54927.1| peptidyl-prolyl cis-trans isomerase [Micromonas pusilla CCMP1545] Length = 210 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 21/70 (30%), Gaps = 1/70 (1%) Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + + K++ G + +F + + P TQ G I Sbjct: 141 DRFAREAGKYSECPSKSKGGSLGTFKPGQMVKEFNDAVFDGPVMEIQGPVQTQFGYHLIL 200 Query: 272 ICDKRDLGGE 281 + D+ + + Sbjct: 201 VTDRVEKEAK 210 >gi|163800282|ref|ZP_02194183.1| peptidyl-prolyl cis-trans isomerase C [Vibrio sp. AND4] gi|159175725|gb|EDP60519.1| peptidyl-prolyl cis-trans isomerase C [Vibrio sp. AND4] Length = 92 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 25/77 (32%), Gaps = 4/77 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + + K +K+++ G + PQF + Sbjct: 15 KEQAEDIIQQLKKGAKFQTLAKKYSTCPSGKKGGDLGEFRRGQMVPQFDKV--CFSGEVL 72 Query: 259 NP--YVTQKGVEYIAIC 273 P T+ G + + Sbjct: 73 TPHLVKTKFGWHVVKVL 89 >gi|289549224|ref|YP_003474212.1| hypothetical protein Thal_1456 [Thermocrinis albus DSM 14484] gi|289182841|gb|ADC90085.1| hypothetical protein Thal_1456 [Thermocrinis albus DSM 14484] Length = 444 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 32/341 (9%), Positives = 85/341 (24%), Gaps = 28/341 (8%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI- 60 + L + +++ F L +F + + +NG I+ D + Sbjct: 5 IQRHRKFLVVTVSVVSFAFFLWLFLAGSVQDILRGKRA--CVAVVNGTCISLRDYRMELL 62 Query: 61 ---ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQHARNTGL 115 LK +++ G +++ + LIV L Q+ + G V + G+ Sbjct: 63 PYSQFLKNEEMEGMIKEQVLDSLIVRELLYQKALEMGFVASDEEVIDTIKSDPTFQEGGV 122 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP----------- 164 + + ++ + + + + + + E E Sbjct: 123 FSASKYREVLERNNLEPAQYEEYLKKMLSIQKLVSFISNSVYITEKEKQANLLPYTTLLT 182 Query: 165 ---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 E +L ++ + + ++ ++ E + + K Sbjct: 183 GKLYLITPDSVKISYEPTDAELLNYYHQHREEFKRPEKRVVRLWETPQRDEALNIYNQLK 242 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--G 279 + + + S + + Sbjct: 243 SSKVPTGYREVILPQQEAELSPVLRAEITRLSSKEPYTVTKDGDKFVVLWLYSWEPSGYE 302 Query: 280 GEIALKAYLSAQNTPT----KIEKHEAEYVKKLRSNAIIHY 316 +K + K++ K L+ I Y Sbjct: 303 DFNNVKDKIKQLLVQQKRLEKLQDVAQSAYKDLKEGKQIDY 343 Score = 40.4 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 16/169 (9%), Positives = 44/169 (26%), Gaps = 6/169 (3%) Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + + + + + + ++ + + +Q + A Sbjct: 272 RLSSKEPYTVTKDGDKFVVLWLYSWEPSGYEDFNNVKDKIKQLLVQQKRLEKLQDVAQSA 331 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 + + + F+ + + + DL + PY + Sbjct: 332 YKDLKEGKQIDYRYLAFSDTPIS-QLASLMKIPQEDLVKLLVSKET-----VFGPYAIAQ 385 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 G + I K + + L K + Y++ L+ A I Sbjct: 386 GYAVLKIESKTTKSLDDKQQKDLIKDILSLKTDSVLNYYLESLKKRAKI 434 >gi|332673506|gb|AEE70323.1| SurA domain protein [Helicobacter pylori 83] Length = 411 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 81/288 (28%), Gaps = 35/288 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 147 ANSTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 200 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 201 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 259 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + + N+ + + + Sbjct: 260 NILLTNVDTSSETKMREYYNKHKEQFSIPTEIETVRYTSTNQEDLERAMADPNLEVPGVS 319 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 K K Q + Q + T G Sbjct: 320 KANEKIEMKTLN---------------------PQIAQVFISHEQGSFTPVMNGGGGQFI 358 Query: 270 ---IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I ++ K +++ + +K E+ +KLR + I Sbjct: 359 TFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 406 >gi|307190110|gb|EFN74266.1| Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Camponotus floridanus] Length = 162 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 9/92 (9%), Positives = 22/92 (23%), Gaps = 1/92 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + ++ E+ K++ G Sbjct: 68 RPSSWREENITRSKEEALELVKSYREQIASGKATFAELASKYSDCSSAKRGGDLGPFSRG 127 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + F+ ++P T G+ I Sbjct: 128 AMQKPFEQAAFTLKVGELSSPVHTDSGIHIIQ 159 >gi|284923881|emb|CBG36980.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli 042] Length = 93 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 17/67 (25%), Gaps = 1/67 (1%) Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKG 266 +K + G + + P F + + T P TQ G Sbjct: 24 QIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFG 83 Query: 267 VEYIAIC 273 I + Sbjct: 84 YHIIKVL 90 >gi|170682547|ref|YP_001746096.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli SMS-3-5] gi|170769831|ref|ZP_02904284.1| peptidyl-prolyl cis-trans isomerase C [Escherichia albertii TW07627] gi|218701311|ref|YP_002408940.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli IAI39] gi|300818755|ref|ZP_07098962.1| PPIC-type PPIASE domain protein [Escherichia coli MS 107-1] gi|300940009|ref|ZP_07154634.1| PPIC-type PPIASE domain protein [Escherichia coli MS 21-1] gi|331665422|ref|ZP_08366321.1| peptidyl-prolyl cis-trans isomerase C (PPIase C)(Rotamase C) (Parvulin) [Escherichia coli TA143] gi|331675247|ref|ZP_08375998.1| peptidyl-prolyl cis-trans isomerase C (PPIase C)(Rotamase C) (Parvulin) [Escherichia coli TA280] gi|170121269|gb|EDS90200.1| peptidyl-prolyl cis-trans isomerase C [Escherichia albertii TW07627] gi|170520265|gb|ACB18443.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli SMS-3-5] gi|218371297|emb|CAR19130.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli IAI39] gi|300455142|gb|EFK18635.1| PPIC-type PPIASE domain protein [Escherichia coli MS 21-1] gi|300528721|gb|EFK49783.1| PPIC-type PPIASE domain protein [Escherichia coli MS 107-1] gi|323964024|gb|EGB59514.1| ppic-type ppiase domain-containing protein [Escherichia coli M863] gi|327250628|gb|EGE62334.1| peptidyl-prolyl cis-trans isomerase C [Escherichia coli STEC_7v] gi|331057320|gb|EGI29309.1| peptidyl-prolyl cis-trans isomerase C (PPIase C)(Rotamase C) (Parvulin) [Escherichia coli TA143] gi|331067533|gb|EGI38937.1| peptidyl-prolyl cis-trans isomerase C (PPIase C)(Rotamase C) (Parvulin) [Escherichia coli TA280] Length = 93 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 17/67 (25%), Gaps = 1/67 (1%) Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKG 266 +K + G + + P F + + T P TQ G Sbjct: 24 QIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFG 83 Query: 267 VEYIAIC 273 I + Sbjct: 84 YHIIKVL 90 >gi|108563069|ref|YP_627385.1| hypothetical protein HPAG1_0644 [Helicobacter pylori HPAG1] gi|107836842|gb|ABF84711.1| hypothetical protein HPAG1_0644 [Helicobacter pylori HPAG1] Length = 414 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 84/288 (29%), Gaps = 35/288 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 150 ANSTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 203 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 204 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 262 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + E + K+ ++ Sbjct: 263 NILLTNVDTSS-ETKMREYYNKHKEQFSIPTEIETVRYTSTSQEDLERAMADPNLEIPGV 321 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 + + +++ Q + Q + T G Sbjct: 322 SKANEKIE--------------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQFI 361 Query: 270 ---IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I ++ K +++ + +K E+ +KLR + I Sbjct: 362 TFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 409 >gi|28900288|ref|NP_799943.1| peptidyl-prolyl cis-trans isomerase C [Vibrio parahaemolyticus RIMD 2210633] gi|260364362|ref|ZP_05777010.1| peptidyl-prolyl cis-trans isomerase C [Vibrio parahaemolyticus K5030] gi|260880855|ref|ZP_05893210.1| peptidyl-prolyl cis-trans isomerase C [Vibrio parahaemolyticus AN-5034] gi|260895998|ref|ZP_05904494.1| peptidyl-prolyl cis-trans isomerase C [Vibrio parahaemolyticus Peru-466] gi|28808599|dbj|BAC61776.1| peptidyl-prolyl cis-trans isomerase C [Vibrio parahaemolyticus RIMD 2210633] gi|308087035|gb|EFO36730.1| peptidyl-prolyl cis-trans isomerase C [Vibrio parahaemolyticus Peru-466] gi|308091575|gb|EFO41270.1| peptidyl-prolyl cis-trans isomerase C [Vibrio parahaemolyticus AN-5034] gi|308113698|gb|EFO51238.1| peptidyl-prolyl cis-trans isomerase C [Vibrio parahaemolyticus K5030] Length = 93 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 25/77 (32%), Gaps = 4/77 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + + K +K+++ G + PQF + Sbjct: 15 KEQAEDIIKQLKKGAKFQTLAKKYSTCPSGKRGGDLGEFRRGQMVPQFDKV--CFSGEVL 72 Query: 259 NP--YVTQKGVEYIAIC 273 P T+ G + + Sbjct: 73 TPHLVKTKFGWHVVKVL 89 >gi|169825702|ref|YP_001695860.1| hypothetical protein Bsph_0092 [Lysinibacillus sphaericus C3-41] gi|168990190|gb|ACA37730.1| Hypothetical yacD protein [Lysinibacillus sphaericus C3-41] Length = 323 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 31/303 (10%), Positives = 79/303 (26%), Gaps = 36/303 (11%) Query: 6 FTSLSDFIKLLTTYFV--LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63 + ++ + ++ F I + S I+G+VIT + + Sbjct: 24 RLKTKPALAVIAVLLLGNILWFIGWVIPNKGQEIGSDEQVAAIDGDVITRQEWMIAM--- 80 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 K +Q L+ ET+ ++ + I ++ Sbjct: 81 -----EERYGKETLQSLVNETVMEKAAKTYKIKVTDQEIDLELALMRS------AQDKFD 129 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 Q + +Q + Q I V+ D + +E + + T Y + Sbjct: 130 TAMQNLTAEQLRQKIRSQLILDKVLTKDVV--INEESIEKYYEENQGLYNTKTSYRTNFI 187 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESD- 241 +K +A + + G +L E+ Sbjct: 188 E-----------VDAKKAADEALGELKNGSDFSVLAREISLDSASASLGGDVGFLTENQE 236 Query: 242 --LHPQFQNLLKKSQNNTTNPYVTQKGVE-YIAICDKRDLGGE--IALKAYLSAQNTPTK 296 + N + + G + + + + +K ++ + + Sbjct: 237 NVDPAIINAVKSTKVNEVSKAFKLDNGHYGIVQVQEILEGQSFTYDDVKEHIERELALEQ 296 Query: 297 IEK 299 + + Sbjct: 297 LPQ 299 >gi|242247195|ref|NP_001156231.1| dodo-like [Acyrthosiphon pisum] gi|239793486|dbj|BAH72856.1| ACYPI007002 [Acyrthosiphon pisum] Length = 163 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 12/104 (11%), Positives = 23/104 (22%), Gaps = 1/104 (0%) Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 Q + E R + + E+ +K++ Sbjct: 56 QCSHLLVKHEKSRRPSSWREERITRSKSEAIDIIKSYREQIVSGKASFAELAQKYSDCSS 115 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 G + F++ + P T GV I Sbjct: 116 AKRGGDLGPFTRGTMQKPFEDASFALKIGELSEPIHTDSGVHII 159 >gi|325208828|gb|ADZ04280.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33] Length = 288 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 78/301 (25%), Gaps = 17/301 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + + S + T+NG+ I I ++A + + E Sbjct: 1 MKAKILTSVALLACSGSLFAQT-----LATVNGQKIDSSVIDAQVAAFRAENSRAEDTPQ 55 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 Q L+ + + + + F A+ + + K Sbjct: 56 LRQSLLENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDDKKPSFKTVWQAVK 115 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + E EI A + ++ + + Sbjct: 116 YG-----LNGEAYALHIAKTQPVSEQEIKAAYDNISGFYKGTQEVQLGEILTDKEENAKK 170 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 + K ++ L+ ++ ++ + + V + E + P +Q + + Sbjct: 171 AVADLKAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDL----EQGVPPLYQAIKDLKKG 226 Query: 256 NTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T P + D R++ + Q + V L A I Sbjct: 227 EFTATPLKNGDFYGVYYVNDSREVKV--PSFDEMKGQIAGNLQAERIDRAVGALLGKANI 284 Query: 315 H 315 Sbjct: 285 K 285 >gi|330842375|ref|XP_003293155.1| hypothetical protein DICPUDRAFT_157953 [Dictyostelium purpureum] gi|325076555|gb|EGC30332.1| hypothetical protein DICPUDRAFT_157953 [Dictyostelium purpureum] Length = 252 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 25/226 (11%), Positives = 61/226 (26%), Gaps = 15/226 (6%) Query: 47 NGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 NGEVI DISK + N ++ + + + + F+ Sbjct: 38 NGEVINQIDISKEK--YTVFGRNSDVSNVVLDH-------PSVSRRHAALVYHGVNDRFY 88 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + + + + + S V+KN ++ L+ Sbjct: 89 LIDLNSAEGTMVNNEKIKPTTPTTVKEGFTFSFASSSKQFVLKNTAPVRAPTLQE----- 143 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + + + + + + + ++ + K + +K++ Sbjct: 144 VRCRHLLVKHRGSRNPSSWRETNITRTKEEAIAQLLEYKKMIDSGKNKFEDLAKKYSDCS 203 Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + + F+N ++ T GV I Sbjct: 204 SAKRGGDLGHFKRGQMQKPFENCSFSLQVGQISDIVDTDSGVHIIQ 249 >gi|163859314|ref|YP_001633612.1| peptidylprolyl isomerase family protein [Bordetella petrii DSM 12804] gi|163263042|emb|CAP45345.1| Peptidylprolyl isomerase family protein [Bordetella petrii] Length = 248 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 27/276 (9%), Positives = 66/276 (23%), Gaps = 47/276 (17%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 +NG + D D+ + L ++ A+ L++ + E + G ++ + Sbjct: 3 VIVNGVELNDADLEQE---LPNHGDAANPQRRAITALVLRRVMLDEARRLG--LNAENDD 57 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + + E + + + + D + + + Sbjct: 58 AAIDALLDSQAATPEPDDAACRRHYEMHPERFTV--GELVEADHILFQVTPQVDLQRLRE 115 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 A + + + Sbjct: 116 RAEAALQQAQAEP------------------------------------ERFAELARALS 139 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDK--RDLG 279 + G L D P+F+ + T P T+ G+ + I L Sbjct: 140 NCPSAAVGGSLGQLGRGDTVPEFERAVFGQPAGTVLPRLVETRHGLHIVRIVRHVAGRLL 199 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + ++ + +Y + L A I Sbjct: 200 PYEQVAPRIAQALAAASRDTAWRQYTRMLVGRARIE 235 >gi|307200199|gb|EFN80493.1| Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Harpegnathos saltator] Length = 151 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 9/92 (9%), Positives = 22/92 (23%), Gaps = 1/92 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + ++ E+ K++ G Sbjct: 57 RPSSWREDNITRSKEEALELVKSFREQIASGKATFAELASKYSDCSSAKRGGDLGPFSRG 116 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + F+ ++P T G+ I Sbjct: 117 AMQKPFEQAAFALKVGELSSPVHTDSGIHIIQ 148 >gi|255036260|ref|YP_003086881.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dyadobacter fermentans DSM 18053] gi|254949016|gb|ACT93716.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dyadobacter fermentans DSM 18053] Length = 774 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 19/198 (9%), Positives = 42/198 (21%), Gaps = 11/198 (5%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I + K ++ + + S + Sbjct: 56 IDDYQDSYNKNKFASDSTKALSPEEYLPLYTDLKIKVLQARSEGKDTTLDYREEIASYRD 115 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +V D + K + + ++ D + + Sbjct: 116 QLAKNHLVDKDLVEKLTTEAYD---------RLKQEVRASHILVGVSEDASPADTLEAHR 166 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSI-GKAQYLLESD-LHPQFQNLLKKSQNNTT 258 + +F+ + G Y L+P + Sbjct: 167 AAIALRGRLEEGSDFADMASRFSKDPAAKTTRGDLGYFTAFQTLYPIETAAYTLPVGKIS 226 Query: 259 NPYVTQKGVEYIAICDKR 276 P T+ G I + D+R Sbjct: 227 QPVRTKAGYHLIKVNDRR 244 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 29/287 (10%), Positives = 61/287 (21%), Gaps = 27/287 (9%) Query: 52 TDGDISKRIALLKLQKIN---------GELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 T D + IA + Q +L A L E + Sbjct: 102 TTLDYREEIASYRDQLAKNHLVDKDLVEKLTTEAYDRLKQEVRASHILVGVSEDASPADT 161 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------- 149 G E + + + + Sbjct: 162 LEAHRAAIALRGRLEEGSDFADMASRFSKDPAAKTTRGDLGYFTAFQTLYPIETAAYTLP 221 Query: 150 -NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + ++ + + RI +A Sbjct: 222 VGKISQPVRTKAGYHLIKVNDRRTNRGMVRVAHIMVTVDTAGTPAQKESAKTRIDEAYAQ 281 Query: 209 RLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQK 265 + +EKF+ + G + P+ + + + P +T Sbjct: 282 LQAGDEWNLVVEKFSDDRESRKNGGLLPLFGTGQMVPEIEEAAFALTRPQSYSKPVLTMY 341 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY-VKKLRSN 311 G I + +KR + + L + K + +LR Sbjct: 342 GWHIIRLIEKRPIETFANMAPALRKKVVTDSRGKVIEQANATRLRKK 388 >gi|160882390|ref|ZP_02063393.1| hypothetical protein BACOVA_00339 [Bacteroides ovatus ATCC 8483] gi|156112203|gb|EDO13948.1| hypothetical protein BACOVA_00339 [Bacteroides ovatus ATCC 8483] Length = 516 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 19/290 (6%), Positives = 74/290 (25%), Gaps = 40/290 (13%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 ++ + + +A + +NG I + Sbjct: 7 LLLGCISLFVVAVFAQEDPVLMRVNGREILRSEFE------------------------- 41 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + ++ + + + L E + ++ + Sbjct: 42 -----YAYRRYAERSNARLSSKEYAALFAQSKLKVEAARAAGLDTTSVFRKQQEKCRTEL 96 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + ++ M + K + + V + R + + + + Sbjct: 97 VESYLIDRQVMDSCARAIYQKMGLKARSGRVQVMQIFKRLPQTITSRHLEEEKTRMDSIY 156 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL-ESDLHPQFQNLLKKSQNNTTNPY 261 + + +E ++ ++ ++ + P+ Sbjct: 157 RMIQNQPD--LNFNRLVEIYSDDKQSR------WIECLETTSEFENVAFSLAKGMASQPF 208 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK-IEKHEAEYVKKLRS 310 T +G+ + + D+ + + A L + + ++K +++L+ Sbjct: 209 FTPEGIHILKVMDREETAAYENVSARLMERLRRKEILDKGTGAVLERLKK 258 >gi|255079356|ref|XP_002503258.1| peptidyl-prolyl cis-trans isomerase [Micromonas sp. RCC299] gi|226518524|gb|ACO64516.1| peptidyl-prolyl cis-trans isomerase [Micromonas sp. RCC299] Length = 216 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 8/70 (11%), Positives = 20/70 (28%), Gaps = 1/70 (1%) Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + + ++ G + +F + + P TQ G I Sbjct: 147 DRFAREAGNYSECPSKSKGGSLGTFKPGQMVKEFNDAVFNGPVGVIQGPVKTQFGYHLIL 206 Query: 272 ICDKRDLGGE 281 + D+ + + Sbjct: 207 VTDRVEPEKK 216 >gi|149187216|ref|ZP_01865514.1| peptidyl-prolyl cis-trans isomerase C [Vibrio shilonii AK1] gi|148838752|gb|EDL55691.1| peptidyl-prolyl cis-trans isomerase C [Vibrio shilonii AK1] Length = 92 Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 27/75 (36%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + + K +K+++ G + + PQF + + Sbjct: 15 KEQAEDIIKQLKKGAKFQTLAKKYSTCPSGKKGGDLGEFRKGQMVPQFDKVCFSGETLVP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G + + Sbjct: 75 HLVKTKFGWHVVKVL 89 >gi|15676260|ref|NP_273394.1| putative cell-binding factor [Neisseria meningitidis MC58] gi|121635519|ref|YP_975764.1| hypothetical protein NMC1825 [Neisseria meningitidis FAM18] gi|161870724|ref|YP_001599897.1| cell-binding factor, putative [Neisseria meningitidis 053442] gi|218768879|ref|YP_002343391.1| putative periplasmi hypothetical protein [Neisseria meningitidis Z2491] gi|254805619|ref|YP_003083840.1| Parvulin-like peptidyl-prolyl isomerase [Neisseria meningitidis alpha14] gi|304386526|ref|ZP_07368814.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091] gi|7225566|gb|AAF40788.1| putative cell-binding factor [Neisseria meningitidis MC58] gi|120867225|emb|CAM10994.1| putative periplasmi hypothetical protein [Neisseria meningitidis FAM18] gi|121052887|emb|CAM09239.1| putative periplasmi hypothetical protein [Neisseria meningitidis Z2491] gi|161596277|gb|ABX73937.1| cell-binding factor, putative [Neisseria meningitidis 053442] gi|254669161|emb|CBA07861.1| Parvulin-like peptidyl-prolyl isomerase [Neisseria meningitidis alpha14] gi|254670178|emb|CBA05266.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis alpha153] gi|254671970|emb|CBA04400.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis alpha275] gi|261391870|emb|CAX49329.1| conserved hypothetical periplasmic protein [Neisseria meningitidis 8013] gi|304339355|gb|EFM05427.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091] gi|316984350|gb|EFV63324.1| conserved hypothetical protein [Neisseria meningitidis H44/76] gi|319411180|emb|CBY91585.1| conserved hypothetical periplasmic protein [Neisseria meningitidis WUE 2594] gi|325128931|gb|EGC51785.1| hypothetical protein NMXN1568_0307 [Neisseria meningitidis N1568] gi|325130875|gb|EGC53605.1| hypothetical protein NMBOX9930304_0328 [Neisseria meningitidis OX99.30304] gi|325134926|gb|EGC57558.1| hypothetical protein NMBM13399_0343 [Neisseria meningitidis M13399] gi|325138885|gb|EGC61435.1| hypothetical protein NMBES14902_0329 [Neisseria meningitidis ES14902] gi|325140994|gb|EGC63500.1| hypothetical protein NMBCU385_0305 [Neisseria meningitidis CU385] gi|325143031|gb|EGC65383.1| hypothetical protein NMB9615945_0390 [Neisseria meningitidis 961-5945] gi|325145140|gb|EGC67422.1| hypothetical protein NMBM01240013_0366 [Neisseria meningitidis M01-240013] gi|325198965|gb|ADY94421.1| conserved hypothetical protein [Neisseria meningitidis G2136] gi|325199539|gb|ADY94994.1| conserved hypothetical protein [Neisseria meningitidis H44/76] gi|325202835|gb|ADY98289.1| conserved hypothetical protein [Neisseria meningitidis M01-240149] gi|325203458|gb|ADY98911.1| conserved hypothetical protein [Neisseria meningitidis M01-240355] gi|325205422|gb|ADZ00875.1| conserved hypothetical protein [Neisseria meningitidis M04-240196] Length = 288 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 31/301 (10%), Positives = 78/301 (25%), Gaps = 17/301 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + + S + T+NG+ I I ++A + + E Sbjct: 1 MKAKILTSVALLACSGSLFAQT-----LATVNGQKIDSSVIDAQVAAFRAENSRAEDTPQ 55 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 Q L+ + + + + F A+ + + K Sbjct: 56 LRQSLLENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDDKKPSFKTVWQAVK 115 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + E E+ A + ++ + + Sbjct: 116 YG-----LNGEAYALHIAKTQPVSEQEVKAAYDNISGFYKGTQEVQLGEILTDKEENAKK 170 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 + K ++ L+ ++ ++ + + V + E + P +Q + + Sbjct: 171 AVADLKAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDL----EQGVPPLYQAIKDLKKG 226 Query: 256 NTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T P + D R++ + Q + V L A I Sbjct: 227 EFTATPLKNGDFYGVYYVNDSREVKV--PSFDEMKGQIAGNLQAERIDRAVGALLGKANI 284 Query: 315 H 315 Sbjct: 285 K 285 >gi|153000160|ref|YP_001365841.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS185] gi|160874787|ref|YP_001554103.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS195] gi|217973872|ref|YP_002358623.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS223] gi|304409751|ref|ZP_07391371.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS183] gi|307304107|ref|ZP_07583860.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica BA175] gi|151364778|gb|ABS07778.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS185] gi|160860309|gb|ABX48843.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS195] gi|217499007|gb|ACK47200.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS223] gi|304352269|gb|EFM16667.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS183] gi|306913005|gb|EFN43428.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica BA175] gi|315267025|gb|ADT93878.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS678] Length = 92 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 24/78 (30%), Gaps = 1/78 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +++ + ++ L +S G+ + +F + + N Sbjct: 14 EEQCQALKQQILEGADFAQIARAHSSCPSGAQGGELGSFGPGMMVREFDEVVFSAPLNEV 73 Query: 258 TNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 74 QGPVKTQFGFHLLEVTSR 91 >gi|126173880|ref|YP_001050029.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS155] gi|125997085|gb|ABN61160.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS155] Length = 92 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 24/78 (30%), Gaps = 1/78 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +++ + ++ L +S G+ + +F + + N Sbjct: 14 EEQCQALKQQILEGADFAQIARAHSSCPSGAQGGELGSFGPGMMVREFDEVVFSAPLNEV 73 Query: 258 TNPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 74 QGPVKTQFGFHLLEVTSR 91 >gi|2246380|emb|CAB06699.1| peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] Length = 221 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 41/117 (35%), Gaps = 3/117 (2%) Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 + + ++ L + + +++ G ++ + P+F+ K++ N Sbjct: 31 ELFAELQKKFLDGEEMSDLAAEYSICPSKKDGGILGWVKLGQMVPEFEEAAFKAELNQVV 90 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 TQ G+ + + +R+ +I + L ++ + +R I Sbjct: 91 RCRTQFGLHLLQVLSEREPVKDIQV-EELHSKMQDPVFMDEAQ--LIDVREPNEIEI 144 >gi|56118644|ref|NP_001008110.1| peptidylprolyl cis/trans isomerase, NIMA-interacting 1 [Xenopus (Silurana) tropicalis] gi|51895927|gb|AAH81312.1| peptidylprolyl cis/trans isomerase, NIMA-interacting 1 [Xenopus (Silurana) tropicalis] Length = 159 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 8/106 (7%), Positives = 25/106 (23%), Gaps = 1/106 (0%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + R + ++ ++ + + +F+ Sbjct: 50 KVRCSHLLVKHNQSRRPSSWRQDRITRTKDEALEHINGYIQKIKSGDEDFESLASRFSDC 109 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 110 SSAKAGGDLGSFGRGAMQKPFEDASFALRPGEMSGPVFTDSGIHII 155 >gi|210608663|ref|ZP_03287940.1| hypothetical protein CLONEX_00119 [Clostridium nexile DSM 1787] gi|210152920|gb|EEA83926.1| hypothetical protein CLONEX_00119 [Clostridium nexile DSM 1787] Length = 344 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 25/322 (7%), Positives = 77/322 (23%), Gaps = 21/322 (6%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + + K + + +V + S+ + T+ G+ I G ++ A + I Sbjct: 1 MRNLKKKVVVFATAASLAVVSMTGCASFENADT-VATVGGDKIPAG-VANFYARYQQGMI 58 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV----QHARNTGLSAEDFSSFL 124 L + + + + + + + + A + ++ S + Sbjct: 59 ETNLGSMLGDNMWTQEVSEGKTYEDNVKDSVMDALQQMYILEDHMAEYEVVLTDEEKSAI 118 Query: 125 DKQGIGDNHFKQYLAIQSIWPDV-----------VKNDFMLKYGNLEMEIPANKQKMKNI 173 + + + A + + + ++ ++++ + Sbjct: 119 QEAAKKFDEGNELEAKELVSGETEYVERVLTLLTIQKKMTDAVTKDVSTEVSDEEAAQKS 178 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 T ++K + A + + + Sbjct: 179 MQYVSFPYTTTDEEGNSKTLTDEEKAALKETAAAFLEGAKAAEDFAAYATEQGKEAQTAT 238 Query: 234 AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293 S T+ T+ G+ + D A K + Sbjct: 239 FDSESTSPAAELIAAADSLGVGGFTDVIETENGLYVAKVTSLLDRDATDAKKETIVNSRK 298 Query: 294 PTKIEKHEAEYVKKLRSNAIIH 315 K + + + I Sbjct: 299 SEKFNGVYDGW----KKDTKIK 316 >gi|291550023|emb|CBL26285.1| PPIC-type PPIASE domain [Ruminococcus torques L2-14] Length = 351 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 22/328 (6%), Positives = 73/328 (22%), Gaps = 36/328 (10%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT-----------DGDISKRIA 61 + + ++ + T+ E IT A Sbjct: 4 LAKRLAVLAVAGTLTATSLTGCGTINTDETVATVGDEKITLGVANFYARLQQAQYENYYA 63 Query: 62 LLK--------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + Q + +K ++ L L Q + Sbjct: 64 SMMGTTAEEMWAKKASDDQTYEEQTKKRILENLENMYLVSQHASDYDVALTEEEQQAIKD 123 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 A+ +++D + + + I + ++ + + Sbjct: 124 AAAKFGEDNSDDVKKVVSGDEEEVAKVLELMTISNKMETAMEAGVDENV--SDEDAAQKS 181 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + + ++ D++ + + D + + + A Sbjct: 182 MQYLLFSYTTTDDSGKSQTLSDDEKEALKTTAQAFDDRLKGGEDMETVASAAGLTAQTAT 241 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 S D ++ + T+ T+ G+ + + Sbjct: 242 FDS-----ESTSPDKDLIAAADALTNEGDVTDIIETENGIYIAKLTS----LLDREATDS 292 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + ++ +++ + + I Sbjct: 293 KKESIVSERKQEQYDSLLEQWKKDTKIK 320 >gi|260777432|ref|ZP_05886326.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio coralliilyticus ATCC BAA-450] gi|260607098|gb|EEX33372.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio coralliilyticus ATCC BAA-450] Length = 92 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 27/75 (36%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + + K +K+++ G + + PQF + + Sbjct: 15 KEQAEDIIKQLKKGAKFQTLAKKYSTCPSGKKGGDLGEFRKGQMVPQFDKVCFSGETLVP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G + + Sbjct: 75 HLVKTKFGWHVVKVL 89 >gi|294461993|gb|ADE76552.1| unknown [Picea sitchensis] Length = 310 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 10/107 (9%), Positives = 33/107 (30%), Gaps = 1/107 (0%) Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQ 264 + + +++ G ++ + + +F+ + N T+ Sbjct: 123 QQRIVREGVDLSDLATEYSICPSKEEGGMLGWVQKGQMVQEFEEAAFSAPLNKLVRCKTK 182 Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 G + + +R+ G A++ Q + + +R + Sbjct: 183 FGWHLLQVLSEREGGFLQAIEPE-ELQVKMQDADFITEAQLMDVRES 228 >gi|89901568|ref|YP_524039.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodoferax ferrireducens T118] gi|89346305|gb|ABD70508.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodoferax ferrireducens T118] Length = 263 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 12/125 (9%), Positives = 35/125 (28%), Gaps = 4/125 (3%) Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLK 251 N+ + + ++ G +L+ +D P+F + Sbjct: 125 NRAETTLLDVRCHDGTGAEDRFAKAASTLSNCPSGAQGGHLGWLVAADCAPEFAKELFGH 184 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 ++ G+ + + + A++ ++ +Y++ L Sbjct: 185 TEVGVLPRLVHSRFGLHVVEVLAREPGAEQPFEAVRGAVAMSLRQKTYVTALRQYLQLLA 244 Query: 310 SNAII 314 A I Sbjct: 245 GQADI 249 >gi|151945094|gb|EDN63345.1| PPIase [Saccharomyces cerevisiae YJM789] gi|190409503|gb|EDV12768.1| ESS1 protein [Saccharomyces cerevisiae RM11-1a] gi|256269534|gb|EEU04819.1| Ess1p [Saccharomyces cerevisiae JAY291] Length = 170 Score = 58.9 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 8/104 (7%), Positives = 26/104 (25%), Gaps = 1/104 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + Q+ K + + + ++ + Sbjct: 64 HILIKHKDSRRPASHRSENITISKQDATDELKTLITRLDDDSKTNSFEALAKERSDCSSY 123 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ P F++ + ++ + GV I Sbjct: 124 KRGGDLGWFGRGEMQPSFEDAAFQLKVGEVSDIVESGSGVHVIK 167 >gi|37362669|ref|NP_012551.2| Ess1p [Saccharomyces cerevisiae S288c] gi|78099772|sp|P22696|ESS1_YEAST RecName: Full=Peptidyl-prolyl cis-trans isomerase ESS1; Short=PPIase ESS1; AltName: Full=Parvulin ESS1; AltName: Full=Processing/termination factor 1 gi|758286|emb|CAA59961.1| Processing/Termination Factor 1 [Saccharomyces cerevisiae] gi|285812911|tpg|DAA08809.1| TPA: Ess1p [Saccharomyces cerevisiae S288c] Length = 170 Score = 58.9 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 8/104 (7%), Positives = 26/104 (25%), Gaps = 1/104 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + Q+ K + + + ++ + Sbjct: 64 HILIKHKDSRRPASHRSENITISKQDATDELKTLITRLDDDSKTNSFEALAKERSDCSSY 123 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ P F++ + ++ + GV I Sbjct: 124 KRGGDLGWFGRGEMQPSFEDAAFQLKVGEVSDIVESGSGVHVIK 167 >gi|1097162|prf||2113292A processing/termination factor Length = 170 Score = 58.9 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 8/104 (7%), Positives = 26/104 (25%), Gaps = 1/104 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + Q+ K + + + ++ + Sbjct: 64 HILIKHKDSRRPASHRSENITISKQDATDELKTLITRLDDDSKTNSFEALAKERSDCSSY 123 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ P F++ + ++ + GV I Sbjct: 124 KRGGDLGWFGRGEMQPSFEDAAFQLKVGEVSDIVESGSGVHVIK 167 >gi|298504944|gb|ADI83667.1| peptidylprolyl cis-trans isomerase, PpiC-type [Geobacter sulfurreducens KN400] Length = 92 Score = 58.9 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 22/78 (28%), Gaps = 1/78 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNT 257 + + + + + + G + + +F +++ N Sbjct: 14 EAECLQLKSEIEAGAEFADVARRHSLCPSRAQGGDLGTFTQGQMVKEFDDIVFSGEINKV 73 Query: 258 TNPYVTQKGVEYIAICDK 275 P TQ G I I + Sbjct: 74 LGPVRTQFGYHLIEITKR 91 >gi|66563115|ref|XP_624205.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Apis mellifera] Length = 162 Score = 58.9 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 9/92 (9%), Positives = 22/92 (23%), Gaps = 1/92 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + ++ E+ K++ G Sbjct: 68 RPSSWREENITRSKEEALELIKSYREQIVSGKVTFAELASKYSDCSSAKRGGDLGPFSRG 127 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + F+ ++P T G+ I Sbjct: 128 AMQKPFEQAAFALKVGELSSPVHTDSGIHIIQ 159 >gi|237719063|ref|ZP_04549544.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_2_4] gi|229451442|gb|EEO57233.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_2_4] Length = 514 Score = 58.9 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 19/290 (6%), Positives = 74/290 (25%), Gaps = 40/290 (13%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 ++ + + +A + +NG I + Sbjct: 5 LLLGCISLFVVAVFAQEDPVLIRVNGREILRSEFE------------------------- 39 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + ++ + + + L E + ++ + Sbjct: 40 -----YAYRRYAERSNARLSSKEYAALFAQSKLKVEAARAAGLDTTSVFRKQQEKCRTEL 94 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + ++ M + K + + V + R + + + + Sbjct: 95 VESYLIDRQVMDSCARAIYQKMGLKARSGRVQVMQIFKRLPQTITSRHLEEEKTRMDSIY 154 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL-ESDLHPQFQNLLKKSQNNTTNPY 261 + + +E ++ ++ ++ + P+ Sbjct: 155 RMIQNQPD--LNFNRLVEIYSDDKQSR------WIECLETTSEFENVAFSLAKGMASQPF 206 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK-IEKHEAEYVKKLRS 310 T +G+ + + D+ + + A L + + ++K +++L+ Sbjct: 207 FTPEGIHILKVMDREETAAYENVSARLMERLRRKEILDKGTGAVLERLKK 256 >gi|146313640|ref|YP_001178714.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterobacter sp. 638] gi|145320516|gb|ABP62663.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterobacter sp. 638] Length = 93 Score = 58.9 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K ++ G + + P F + + Sbjct: 13 KEEKLALDLLEQIKNGADFEKLAKKHSTCPSGKKGGHLGEFRQGQMVPAFDKVVFSCPVL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 T P TQ G I + Sbjct: 73 EPTGPLHTQFGYHIIKVL 90 >gi|59801983|ref|YP_208695.1| hypothetical protein NGO1656 [Neisseria gonorrhoeae FA 1090] gi|194099536|ref|YP_002002666.1| Cell-binding factor, putative [Neisseria gonorrhoeae NCCP11945] gi|239999742|ref|ZP_04719666.1| Cell-binding factor, putative [Neisseria gonorrhoeae 35/02] gi|240014900|ref|ZP_04721813.1| Cell-binding factor, putative [Neisseria gonorrhoeae DGI18] gi|240017348|ref|ZP_04723888.1| Cell-binding factor, putative [Neisseria gonorrhoeae FA6140] gi|240081490|ref|ZP_04726033.1| Cell-binding factor, putative [Neisseria gonorrhoeae FA19] gi|240113770|ref|ZP_04728260.1| Cell-binding factor, putative [Neisseria gonorrhoeae MS11] gi|240116505|ref|ZP_04730567.1| Cell-binding factor, putative [Neisseria gonorrhoeae PID18] gi|240118728|ref|ZP_04732790.1| Cell-binding factor, putative [Neisseria gonorrhoeae PID1] gi|240121970|ref|ZP_04734932.1| Cell-binding factor, putative [Neisseria gonorrhoeae PID24-1] gi|240124267|ref|ZP_04737223.1| Cell-binding factor, putative [Neisseria gonorrhoeae PID332] gi|240126477|ref|ZP_04739363.1| Cell-binding factor, putative [Neisseria gonorrhoeae SK-92-679] gi|240128940|ref|ZP_04741601.1| Cell-binding factor, putative [Neisseria gonorrhoeae SK-93-1035] gi|254494530|ref|ZP_05107701.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|260439738|ref|ZP_05793554.1| Cell-binding factor, putative [Neisseria gonorrhoeae DGI2] gi|268595556|ref|ZP_06129723.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268597591|ref|ZP_06131758.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268599842|ref|ZP_06134009.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268602176|ref|ZP_06136343.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268604442|ref|ZP_06138609.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268682896|ref|ZP_06149758.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268685062|ref|ZP_06151924.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268687326|ref|ZP_06154188.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|291042988|ref|ZP_06568726.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|293398329|ref|ZP_06642520.1| cell-binding factor [Neisseria gonorrhoeae F62] gi|59718878|gb|AAW90283.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|193934826|gb|ACF30650.1| Cell-binding factor, putative [Neisseria gonorrhoeae NCCP11945] gi|226513570|gb|EEH62915.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268548945|gb|EEZ44363.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268551379|gb|EEZ46398.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268583973|gb|EEZ48649.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268586307|gb|EEZ50983.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268588573|gb|EEZ53249.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268623180|gb|EEZ55580.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268625346|gb|EEZ57746.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268627610|gb|EEZ60010.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|291013127|gb|EFE05096.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291611253|gb|EFF40337.1| cell-binding factor [Neisseria gonorrhoeae F62] Length = 288 Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 31/301 (10%), Positives = 77/301 (25%), Gaps = 17/301 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + + S + T+NG+ I I ++A + + E Sbjct: 1 MKAKILTSVALLACSGSLFAQT-----LATVNGQKIDSSVIDAQVAAFRAENSRAEDTPQ 55 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 Q L+ + + + + F A+ + + K Sbjct: 56 LRQSLLENEVVNTVVAQEVKRLKLDRSAEFKDALAKLRAEAKKSGDDKKPSFKTVWQAVK 115 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + E E+ A + ++ + + Sbjct: 116 YG-----LNGEAYALHIAKTQPVSEQEVKAVYDNISGFYKGTQEVQLGEILTDKEENAKK 170 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 + K ++ L+ ++ ++ + V + E + P +Q + + Sbjct: 171 AVADLKAKKGFDAVLKQYSLNDRTKRTGAPDGYVPLKDL----EQGVPPLYQAIKDLKKG 226 Query: 256 NTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 T P + D R++ + Q + V L A I Sbjct: 227 EFTATPLKNGDFYGVYYVNDSREVKV--PSFDEMKGQIAGNLQAERIDRAVGALLGKANI 284 Query: 315 H 315 Sbjct: 285 K 285 >gi|317181972|dbj|BAJ59756.1| hypothetical protein HPF57_0682 [Helicobacter pylori F57] Length = 411 Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 89/289 (30%), Gaps = 37/289 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 147 AGSTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 200 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 201 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 259 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + + NQ +++ + + Sbjct: 260 NILLTNVDTSSETKMREYYNKHKEQFSIPTEIETVRY----TSTNQEDLERAMSNPNLEV 315 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG--- 266 + K K + L+PQ + + + P + G Sbjct: 316 PGVSKANEK------------------IEMKTLNPQIAQVFISHEQGSFTPIMNGGGGQF 357 Query: 267 -VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 YI ++ K +++ + +K E+ +KLR + I Sbjct: 358 ITFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 406 >gi|260172003|ref|ZP_05758415.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D2] gi|315920316|ref|ZP_07916556.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D2] gi|313694191|gb|EFS31026.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D2] Length = 515 Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 19/290 (6%), Positives = 74/290 (25%), Gaps = 40/290 (13%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 ++ + + +A + +NG I + Sbjct: 6 LLLGCISLFVVAVFAQEDPVLMRVNGREILRSEFE------------------------- 40 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + ++ + + + L E + ++ + Sbjct: 41 -----YAYRRYAERSNARLSSKEYAALFAQSKLKVEAARAAGLDTTSVFRKQQEKCRTEL 95 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + ++ M + K + + V + R + + + + Sbjct: 96 VESYLIDRQVMDSCARAIYQKMGLKARSGRVQVMQIFKRLPQTITSRHLEEEKTRMDSIY 155 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL-ESDLHPQFQNLLKKSQNNTTNPY 261 + + +E ++ ++ ++ + P+ Sbjct: 156 RMIQNQPD--LNFNRLVEIYSDDKQSR------WIECLETTSEFENVAFSLAKGMASQPF 207 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK-IEKHEAEYVKKLRS 310 T +G+ + + D+ + + A L + + ++K +++L+ Sbjct: 208 FTPEGIHILKVMDREETAAYENVSARLMERLRRKEILDKGAGAVLERLKK 257 >gi|116696205|ref|YP_841781.1| peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha H16] gi|113530704|emb|CAJ97051.1| Peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha H16] Length = 250 Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 14/155 (9%), Positives = 45/155 (29%), Gaps = 5/155 (3%) Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + + + +LF + + + + R ++ Sbjct: 84 YDSRPERFRDGEWVEADHILFQVTPRVPLD-ALREIAAQTLALVRGDPSTFPEHARALSN 142 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLG--G 280 + G+ + + P+F+ L + + T+ G+ + + ++ Sbjct: 143 CPSGANGGRLGRVFRGETAPEFERALFAAQQDGVLPHLLETRYGLHIVRVLERCPGTRLP 202 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 A++ ++ ++ +Y L A I Sbjct: 203 FDAVRGDIARALASAARDRAWKQYASLLIGRARIE 237 >gi|311106144|ref|YP_003978997.1| PPIC-type PPIASE domain-containing protein 2 [Achromobacter xylosoxidans A8] gi|310760833|gb|ADP16282.1| PPIC-type PPIASE domain protein 2 [Achromobacter xylosoxidans A8] Length = 253 Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 29/276 (10%), Positives = 69/276 (25%), Gaps = 47/276 (17%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 +NG + D D+ + L G + A+ L++ + E + G D+ Sbjct: 3 VIVNGVELNDADLERE---LPPHAEAGNPMREAITALVLRRVLLDEAGRLG--LDAADEE 57 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + E + + ++A + I D + + Sbjct: 58 GAIGALLAREAPAPEADEAACRRYYQMHPQR--FMAGELIEADHILFQVTPGVNLDML-- 113 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 E + + + Sbjct: 114 ----------------------------------RAHANVVLAELLEDPSRFAEVAREQS 139 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRD--LG 279 + G L D P+F+ + + T+ G+ + + + + + Sbjct: 140 NCPSAALGGSLGQLGRGDTVPEFERAVFALPAGGLLPQLLETRHGLHIVRVTRRIEGRMQ 199 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + A ++ + + +Y K L A I Sbjct: 200 PYEHVAAQIATALSSMSRDTAWRQYAKLLVERADIQ 235 >gi|319760272|ref|YP_004124210.1| chaperone surA [Candidatus Blochmannia vafer str. BVAF] gi|318038986|gb|ADV33536.1| chaperone surA [Candidatus Blochmannia vafer str. BVAF] Length = 433 Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 37/293 (12%), Positives = 99/293 (33%), Gaps = 15/293 (5%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--------QKINGELEKIAVQELIVE 83 +Y + + +N +I D+ +I ++KL + L KIA+++LI + Sbjct: 19 TYSILQTTDKTVALVNNAIILHSDLLNKINIIKLNPFNSPDHLTKDKYLYKIALEQLITD 78 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 L Q K I + N +++ ++ ++ F S L+K G+ + + + + Sbjct: 79 HLITQVANKKNININYNQIDHIIDHITQSRNMTHTQFLSHLNKYGLNYTQYSSEIYQEIL 138 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + + EI Q+ + + L+ ++ Q Sbjct: 139 NKVICNHAICQHINISSYEINDIIQQSNFVDFKKKFKLMHIIIELPIYPSSQQINSYNNL 198 Query: 202 IKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT 258 + + + + + S +++ K ++ ++ F + Sbjct: 199 SRLLIKKIESKTNAQDLIYTYYSNNIFPRITVKKTSWISWQNIPMIFDQSLQSAKPGDVI 258 Query: 259 NPYVTQKGVEYIAICDK-RDLGGEIALKAYLSAQNTPTKIEKHE-AEYVKKLR 309 P + G+ +AI D ++ +++ + + + +L+ Sbjct: 259 GPIHSYDGIHILAIQDILDKQHTFPIIRVKINSILFKHVSNEQYIKKQLLQLK 311 Score = 45.8 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 32/276 (11%), Positives = 80/276 (28%), Gaps = 14/276 (5%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT---VNYFFV 107 I+ +I+ I + + + +I+E ++ + + Sbjct: 153 ISSYEINDIIQQSNFVDFKKKFK---LMHIIIELPIYPSSQQINSYNNLSRLLIKKIESK 209 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND-------FMLKYGNLE 160 +A++ + + F + + G Sbjct: 210 TNAQDLIYTYYSNNIFPRITVKKTSWISWQNIPMIFDQSLQSAKPGDVIGPIHSYDGIHI 269 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + I K + I ++LF N+ + + + + E R + Sbjct: 270 LAIQDILDKQHTFPIIRVKINSILFKHVSNEQYIKKQLLQLKTELENHRTTFDIVLKEKS 329 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 K + + + L DL Q ++LL +N ++P I + D + + Sbjct: 330 KNFYSENYDHLEQWIDLDHFDLSVQ-KSLLALKKNQISDPIYIFNKWGIIKLIDIKKVNY 388 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ K + +++KL+S + I Sbjct: 389 SEIIRERAYLFLLSQKYNETLNNWIQKLKSESYIKI 424 >gi|261250951|ref|ZP_05943525.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio orientalis CIP 102891] gi|260937824|gb|EEX93812.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio orientalis CIP 102891] Length = 92 Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 26/75 (34%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + + K +K+++ G + PQF + + Sbjct: 15 KEQAEDIIKQLKKGAKFQTLAKKYSTCPSGKKGGDLGEFRRGQMVPQFDKVCFSGETLVP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G + + Sbjct: 75 HLVKTKFGWHVVKVL 89 >gi|255656245|ref|ZP_05401654.1| putative protein export chaperone [Clostridium difficile QCD-23m63] Length = 140 Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 9/122 (7%), Positives = 36/122 (29%), Gaps = 7/122 (5%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 ++K ++ + +K++ S G + + + F+ + Sbjct: 14 ELKKEAEEILKKAQAGEDFATLAKKYSEDSSAESGGDLGFFGKGQMVESFEKAAFALKKG 73 Query: 256 NTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + G I D++ + + + + ++ ++ L+ + Sbjct: 74 EVSNKLVESDYGYHIIKKTDEKYQP-----FEEIKSDLVSSLTSEKQSLLIQNLKEKYNV 128 Query: 315 HY 316 Sbjct: 129 KI 130 >gi|323347922|gb|EGA82182.1| Ess1p [Saccharomyces cerevisiae Lalvin QA23] Length = 170 Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 8/104 (7%), Positives = 26/104 (25%), Gaps = 1/104 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + Q+ K + + + ++ + Sbjct: 64 HILIKHKXSRRPASHRSENITISKQDATDELKTLITRLDDDSKTNSFEALAKERSDCSSY 123 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ P F++ + ++ + GV I Sbjct: 124 KRGGDLGWFGRGEMQPSFEDAAFQLKVGEVSDIVESGSGVHVIK 167 >gi|323304351|gb|EGA58124.1| Ess1p [Saccharomyces cerevisiae FostersB] Length = 170 Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 8/104 (7%), Positives = 26/104 (25%), Gaps = 1/104 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + Q+ K + + + ++ + Sbjct: 64 HILIKHKXSRRPASHRSENITISKQDATDELKTLITRLDDDSKTNSFEALAKERSDCSSY 123 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ P F++ + ++ + GV I Sbjct: 124 KRGGDLGWFGRGEMQPSFEDAAFQLKVGEVSDIVESGSGVHVIK 167 >gi|15601706|ref|NP_233337.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae O1 biovar eltor str. N16961] gi|121586688|ref|ZP_01676472.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae 2740-80] gi|121726404|ref|ZP_01679678.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae V52] gi|147672166|ref|YP_001215127.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae O395] gi|153212171|ref|ZP_01947966.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae 1587] gi|153801415|ref|ZP_01956001.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae MZO-3] gi|153818331|ref|ZP_01970998.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae NCTC 8457] gi|153821043|ref|ZP_01973710.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae B33] gi|153824744|ref|ZP_01977411.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae MZO-2] gi|153827820|ref|ZP_01980487.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae 623-39] gi|227812519|ref|YP_002812529.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae M66-2] gi|229505907|ref|ZP_04395416.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae BX 330286] gi|229510239|ref|ZP_04399719.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae B33] gi|229514365|ref|ZP_04403826.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae TMA 21] gi|229517631|ref|ZP_04407076.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae RC9] gi|229522478|ref|ZP_04411894.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae TM 11079-80] gi|229526497|ref|ZP_04415901.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae bv. albensis VL426] gi|229528148|ref|ZP_04417539.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae 12129(1)] gi|229605439|ref|YP_002876143.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae MJ-1236] gi|254224743|ref|ZP_04918359.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae V51] gi|254284579|ref|ZP_04959546.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae AM-19226] gi|254850119|ref|ZP_05239469.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae MO10] gi|255746306|ref|ZP_05420253.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholera CIRS 101] gi|262158187|ref|ZP_06029305.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae INDRE 91/1] gi|262169214|ref|ZP_06036907.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae RC27] gi|262191931|ref|ZP_06050098.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae CT 5369-93] gi|262403035|ref|ZP_06079595.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio sp. RC586] gi|297579998|ref|ZP_06941925.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae RC385] gi|298499727|ref|ZP_07009533.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae MAK 757] gi|9658391|gb|AAF96849.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549116|gb|EAX59151.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae 2740-80] gi|121631152|gb|EAX63527.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae V52] gi|124116723|gb|EAY35543.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae 1587] gi|124123081|gb|EAY41824.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae MZO-3] gi|125622806|gb|EAZ51124.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae V51] gi|126511144|gb|EAZ73738.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae NCTC 8457] gi|126521417|gb|EAZ78640.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae B33] gi|146314549|gb|ABQ19089.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae O395] gi|148876665|gb|EDL74800.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae 623-39] gi|149741700|gb|EDM55729.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae MZO-2] gi|150425364|gb|EDN17140.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae AM-19226] gi|227011661|gb|ACP07872.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae M66-2] gi|227015600|gb|ACP11809.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae O395] gi|229334510|gb|EEN99995.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae 12129(1)] gi|229336655|gb|EEO01673.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae bv. albensis VL426] gi|229340463|gb|EEO05469.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae TM 11079-80] gi|229345667|gb|EEO10640.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae RC9] gi|229348345|gb|EEO13303.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae TMA 21] gi|229352684|gb|EEO17624.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae B33] gi|229356258|gb|EEO21176.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae BX 330286] gi|229371925|gb|ACQ62347.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae MJ-1236] gi|254845824|gb|EET24238.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae MO10] gi|255736060|gb|EET91458.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholera CIRS 101] gi|262022495|gb|EEY41203.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae RC27] gi|262030065|gb|EEY48711.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae INDRE 91/1] gi|262032165|gb|EEY50736.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio cholerae CT 5369-93] gi|262350534|gb|EEY99667.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio sp. RC586] gi|297535644|gb|EFH74478.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae RC385] gi|297541708|gb|EFH77759.1| peptidyl-prolyl cis-trans isomerase C [Vibrio cholerae MAK 757] gi|327485928|gb|AEA80334.1| Peptidyl-prolyl cis-trans isomerase ppiC [Vibrio cholerae LMA3894-4] Length = 92 Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 23/77 (29%), Gaps = 4/77 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ D + K +K+++ G + + P F Q Sbjct: 15 KEQADDILAQLKKGAKFHVLAKKYSTCPSGKKGGDLGEFRQGQMVPAFDKA--CFQGEVL 72 Query: 259 NP--YVTQKGVEYIAIC 273 P T+ G + + Sbjct: 73 TPQLVKTKFGWHVVKVL 89 >gi|262039460|ref|ZP_06012764.1| foldase protein PrsA [Leptotrichia goodfellowii F0264] gi|261746527|gb|EEY34062.1| foldase protein PrsA [Leptotrichia goodfellowii F0264] Length = 607 Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 31/268 (11%), Positives = 75/268 (27%), Gaps = 7/268 (2%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 I + + D K + + + K L S + Sbjct: 237 IKIKNDDVKKIDYKKMYENITKTIVEKDGYKFEGGSL--NEKIITMFVNSENGYSEALRE 294 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + E + + + Sbjct: 295 EAKKSLESDLNKLIEIAKKAKAAGIKASPEAAGIQELNDYAKKYYSYLIDTYKPTEQAML 354 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 K + ++ + V+ + V+K+ ++ ++ + K ++ + Sbjct: 355 ERFNSKRETYNIQNTIAGQVVGDYFQPSKADFDEVKKKAEELIKTV-NVENFGQKAKELS 413 Query: 224 SKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G+ + S + P+F + + K + P TQ G I + DK + Sbjct: 414 QDPGSKDNGGQLGVIDLSGMVPEFAEAVKKAEKGKIVGPVKTQFGYHIIYVEDKDSSNSD 473 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLR 309 A +++ TP+ E + E +KK++ Sbjct: 474 KAKVSHIL--LTPSVSEATKQELIKKMK 499 Score = 43.1 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 32/282 (11%), Positives = 80/282 (28%), Gaps = 31/282 (10%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ------ 66 I L+ + + +++ + + ++ +NGE I D+ K A L + Sbjct: 15 IALIIAFALSMVYAGWNFLKNNVFIERKKVIAEVNGEKIYADDMEKSYADLSSRLDSIVA 74 Query: 67 ------------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 L + ++ LI + L + + S ++ Sbjct: 75 QRKQQIAQLGGNPDNFKSLPEELLREYLLKGLIDQKLLLSSAKDLKVKVSSADIDKIVEN 134 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + G E+F L G +K+++ + + V + + E A ++ Sbjct: 135 DQKQAG-GKENFIRLLGTNGYNLTTYKEFIRDKMLLEKVAEKIESSSKISDEELKKAYER 193 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + I N+ + ++ + ++K K Sbjct: 194 YKYFNFQDQTFEEAKPQLIETLNGDNEQMLISSYLVKAWKNAKIKIKNDDVKKIDYKKMY 253 Query: 229 VSI------GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQ 264 +I L+ + + S+N + + Sbjct: 254 ENITKTIVEKDGYKFEGGSLNEKIITMFVNSENGYSEALREE 295 >gi|311029004|ref|ZP_07707094.1| hypothetical protein Bm3-1_00328 [Bacillus sp. m3-13] gi|311032299|ref|ZP_07710389.1| hypothetical protein Bm3-1_17466 [Bacillus sp. m3-13] Length = 309 Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 31/315 (9%), Positives = 85/315 (26%), Gaps = 45/315 (14%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIV-----------SYKSWAMSSRIRTTINGE 49 M K ++ ++ + +V + + I T+ Sbjct: 1 MNEKRRLKQKWVWNIIFGLVIINCLTLAVVVKQTFSLREASDASAFVNGQANIVATVGDT 60 Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 VIT D+ + + + Q L K+ E++ + KK ++ S + D Sbjct: 61 VITRKDMLEELEGMYGQ---EMLTKMVNNEVVKQIAKKYKVTVSEQSVDREW-------- 109 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + + + + N ++ + Q +++ + E E+ + Q+ Sbjct: 110 --------KMIKTMYSRSPLHTNTSEELVKEQIRSSLLLEELLVKDVNIPEAELESYYQE 161 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHD 228 K + E + + + + + ++ + Sbjct: 162 NKQLYTIEDAFHLSHIIVETKDEADAVVKE---------LEDGSNFTSLAMEVSTDELTA 212 Query: 229 VSIGKAQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIA 283 G +L + ++P + I + +K D Sbjct: 213 NQGGDLGFLTHESQVYPTAYMAEAANLKEKTWSDPISVDEKYAIIYLYEKMDGVTYSFDE 272 Query: 284 LKAYLSAQNTPTKIE 298 +K + ++ Sbjct: 273 VKDQIRRHLAMEHMD 287 >gi|259147486|emb|CAY80738.1| Ess1p [Saccharomyces cerevisiae EC1118] Length = 170 Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 10/124 (8%), Positives = 32/124 (25%), Gaps = 3/124 (2%) Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 K+ + + + +K+ R + K + + Sbjct: 46 KDQLHKHLKDHPVRVRCLHILIKHKGSRRPASHRSENITISKQDATDEL--KTLITRLDD 103 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 + ++ + G + ++ P F++ + ++ + GV Sbjct: 104 DSKTNSFEALAKERSDCSSYKRGGDLGWFGRGEMQPSFEDAAFQLKVGEVSDIVESGSGV 163 Query: 268 EYIA 271 I Sbjct: 164 HVIK 167 >gi|207093124|ref|ZP_03240911.1| hypothetical protein HpylHP_10109 [Helicobacter pylori HPKX_438_AG0C1] Length = 331 Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 80/272 (29%), Gaps = 31/272 (11%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 +NG IT I + Q+ + + A LI E +K QEIE+ I D + ++ Sbjct: 83 VNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDDKLDQE 136 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 A+ G+ + F L +G ++ L ++++N + E Sbjct: 137 MAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLRNILLTNVDTSS-ETKM 194 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + K+ ++ + + Sbjct: 195 REYYNKHKEQFSIPTEIETVRYTSTNQEDLERAMADPNLEIPGVSKANEKIE-------- 246 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY---IAICDKRDLGGEI 282 +++ Q + Q + T G I ++ Sbjct: 247 ------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQFITFYIKEKKGKNEVSFS 294 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K +++ + +K E+ +KLR + I Sbjct: 295 QAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 326 >gi|156373135|ref|XP_001629389.1| predicted protein [Nematostella vectensis] gi|156216388|gb|EDO37326.1| predicted protein [Nematostella vectensis] Length = 150 Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 8/97 (8%), Positives = 21/97 (21%), Gaps = 1/97 (1%) Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 R + + E+ + + + + + G Sbjct: 50 KHSESRRPSSWKTDKITRSKDEALAILKGYQEQIKSGEATLEDLAKTESDCSSAKNGGDL 109 Query: 235 QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + + F+ + P T G+ I Sbjct: 110 GFFGRGQMQKPFETATFSLRVGEMSEPVFTDSGIHLI 146 >gi|304313026|ref|YP_003812624.1| hypothetical protein HDN1F_34090 [gamma proteobacterium HdN1] gi|301798759|emb|CBL46992.1| Hypothetical protein HDN1F_34090 [gamma proteobacterium HdN1] Length = 750 Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 28/266 (10%), Positives = 76/266 (28%), Gaps = 16/266 (6%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 ++L ++ ++ AV +L + Q + Sbjct: 474 ESAPQSIRLDQVLRSADEAAVLKLRRGDTETFGRLTVIYARTRLHEGLLLKQQRLDDVDL 533 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + +D++ + + I+ + + E++ K + + Sbjct: 534 STLNQIVIDRERRVEMEEAAGVRIEMHHSPEQIRRLIKTITDTEIDAYYEKHQRDFQQIG 593 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 E R + S + + ++K + E R AS + G Sbjct: 594 EVSARHITVSSQKDADRVVDEIRKGLSFEEAVRK---------YSLASDKTENPPGSMGR 644 Query: 237 LLESD--LHPQFQNLLKKSQNNTTNPYVTQKG--VEYIAICDKRDL---GGEIALKAYLS 289 + ++ L + L +N + G E + + + + + ++++ + Sbjct: 645 ISRTEKNLSFLQKLTLILPAGEVSNSFRMPDGKSWEILWVDSRTAVSLPKSDESVRSEIR 704 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + A+ V L A + Sbjct: 705 RTLAQEKAQTQFADQVADLWQRAEVQ 730 >gi|315123321|ref|YP_004065327.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Pseudoalteromonas sp. SM9913] gi|315017081|gb|ADT70418.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Pseudoalteromonas sp. SM9913] Length = 92 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 24/75 (32%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 ++ +D + + K +K++S G + PQF + Sbjct: 15 KEIAEDIIKQLGKGAKFQTLAKKYSSCPSGKKGGDLGEFRRGQMVPQFDKVAFSGAILEP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G I + Sbjct: 75 HLVKTKFGWHVIKVL 89 >gi|297379859|gb|ADI34746.1| Hypothetical protein HPV225_0667 [Helicobacter pylori v225d] Length = 411 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 83/288 (28%), Gaps = 35/288 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 147 AGSTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 200 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 201 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 259 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + E + K+ ++ Sbjct: 260 NILLTNVDTSS-ETKMREYYNKHKEQFSIPTEIETVRYTSTNQEDLERAMSNPNLEIPGV 318 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 + + +++ Q + Q + T G Sbjct: 319 SKANEKIE--------------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQFI 358 Query: 270 ---IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I ++ K +++ + +K E+ +KLR + I Sbjct: 359 TFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 406 >gi|293393860|ref|ZP_06638167.1| peptidyl-prolyl cis-trans isomerase C [Serratia odorifera DSM 4582] gi|291423687|gb|EFE96909.1| peptidyl-prolyl cis-trans isomerase C [Serratia odorifera DSM 4582] Length = 93 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 21/76 (27%), Gaps = 1/76 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +K + R K+++ + G + + F + + Sbjct: 15 EKLANELLAKLKRGVSFDTLARKYSTCPSKRNGGSLGEFNKGTMVAAFDKAVFSIPLLKP 74 Query: 258 TNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 75 YGPVKTQFGYHIIKVL 90 >gi|256823777|ref|YP_003147740.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Kangiella koreensis DSM 16069] gi|256797316|gb|ACV27972.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Kangiella koreensis DSM 16069] Length = 95 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 20/82 (24%), Gaps = 3/82 (3%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 +K + + ++ + G + F N + + Sbjct: 12 KTEKEALALKAKLEKGADFYQLAKRHSMCPSKKQGGDLGEFKRGQMVKPFDNAVFAKGSE 71 Query: 257 ---TTNPYVTQKGVEYIAICDK 275 P T+ G I + K Sbjct: 72 DKPLIGPVKTRFGYHLIKVLYK 93 >gi|78223024|ref|YP_384771.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter metallireducens GS-15] gi|78194279|gb|ABB32046.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter metallireducens GS-15] Length = 92 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 21/79 (26%), Gaps = 1/79 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 + + K ++ + G + + +F + + N Sbjct: 13 TEAECLQLKAEIEAGADFAEIARKNSACPSRMQGGDLGAFVPGQMVKEFDEVVFSGEINK 72 Query: 257 TTNPYVTQKGVEYIAICDK 275 P TQ G I I + Sbjct: 73 VLGPVRTQFGYHLIEITKR 91 >gi|283834548|ref|ZP_06354289.1| peptidyl-prolyl cis-trans isomerase [Citrobacter youngae ATCC 29220] gi|291069678|gb|EFE07787.1| peptidyl-prolyl cis-trans isomerase [Citrobacter youngae ATCC 29220] Length = 93 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 20/78 (25%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + Sbjct: 13 KEEKLALDLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKLVFSCPVL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 P TQ G + + Sbjct: 73 EPVGPLHTQFGYHIVKVL 90 >gi|323308448|gb|EGA61693.1| Ess1p [Saccharomyces cerevisiae FostersO] Length = 170 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 8/104 (7%), Positives = 26/104 (25%), Gaps = 1/104 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + Q+ K + + + ++ + Sbjct: 64 HILIKHKGSRRPASHRSENITISKQDATDELKTLITRLDDDSKTNSFEALAKERSDCSSY 123 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ P F++ + ++ + GV I Sbjct: 124 KRGGDLGWFGRGEMQPSFEDAAFQLKVGEVSDIVESGSGVHVIK 167 >gi|295088064|emb|CBK69587.1| PPIC-type PPIASE domain. [Bacteroides xylanisolvens XB1A] Length = 419 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 19/291 (6%), Positives = 75/291 (25%), Gaps = 40/291 (13%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 ++ + + +A + +NG + + + Sbjct: 7 LLLGCISLFVVAVFAQEDPVLMRVNGREVLRSEFENAYRRYAERSNAQ------------ 54 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + L E + + + Sbjct: 55 ------------------LSPKEYAALFAQSKLKVEAARAAGLDTTAVFRKQHEKRRTEL 96 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + ++ M + + K + + V + R + + + + Sbjct: 97 VESYLIDKQVMDSCARVLYQKMGLKARNGRVQVMQIFKRLPQTVTSRHLEEEKARMDSIY 156 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN-TTNPY 261 + + +E ++ ++ + +F+++ + P+ Sbjct: 157 RVIQNQPD--LNFNRLVEIYSDDKQSR------WIEGLETTSEFEDVAFSLAKAAVSQPF 208 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK-IEKHEAEYVKKLRSN 311 T +G+ + + D+ + + L + + ++K A + +L+ + Sbjct: 209 FTPEGIHILKVIDREEAFAYENVSGRLIERLRRKEILDKGTAAMLDRLKRS 259 >gi|317180456|dbj|BAJ58242.1| hypothetical protein HPF32_0660 [Helicobacter pylori F32] Length = 411 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 89/289 (30%), Gaps = 37/289 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 147 AGSTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 200 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 201 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 259 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + + NQ +++ + + Sbjct: 260 NILLTNVDTSSETKMREYYNKHKEQFSIPTEIETVRY----TSTNQEDLERAMSNPNLEV 315 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG--- 266 + K K + L+PQ + + + P + G Sbjct: 316 PGVSKANEK------------------IEMKTLNPQIAQVFISHEQGSFTPIMNGGGGQF 357 Query: 267 -VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 YI ++ K +++ + +K E+ +KLR + I Sbjct: 358 ITFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 406 >gi|308182851|ref|YP_003926978.1| hypothetical protein HPPC_03490 [Helicobacter pylori PeCan4] gi|308065036|gb|ADO06928.1| hypothetical protein HPPC_03490 [Helicobacter pylori PeCan4] Length = 405 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 89/288 (30%), Gaps = 35/288 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 141 ANSTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 194 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 195 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 253 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + + NQ +++ + + Sbjct: 254 NILLTNVDTSSETKMREYYNKHKDQFSIPTEVETVRY----TSTNQEDLERAMSNPNLEV 309 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 + K K+E +++ Q + Q + T G Sbjct: 310 PGVSKANEKIE-----------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQFI 352 Query: 270 ---IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I ++ K +++ + +K E+ +KLR + I Sbjct: 353 TFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 400 >gi|260596006|ref|YP_003208577.1| peptidyl-prolyl cis-trans isomerase C [Cronobacter turicensis z3032] gi|260215183|emb|CBA27011.1| Peptidyl-prolyl cis-trans isomerase C [Cronobacter turicensis z3032] Length = 129 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 21/78 (26%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + Sbjct: 49 KEEKLALDLLEQIKNGGDFEKLAKKHSICPSGKKGGHLGEFRQGQMVPAFDKVVFSCPVL 108 Query: 256 NTTNPYVTQKGVEYIAIC 273 T P TQ G I + Sbjct: 109 EPTGPLHTQFGYHIIKVL 126 >gi|269122654|ref|YP_003310831.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sebaldella termitidis ATCC 33386] gi|268616532|gb|ACZ10900.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sebaldella termitidis ATCC 33386] Length = 600 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 12/162 (7%), Positives = 43/162 (26%), Gaps = 4/162 (2%) Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 Y + ++ + + + + + + K+ + + L Sbjct: 335 DSYNPSDADLKKIYDADQGKYDIRHSVGGYVVGDFFDPTEADKENTKKSAEELKKTLTPE 394 Query: 214 KDCNKLEKFASKI-HDVSIGKAQYLLESD--LHPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 +K + G+ ++ + + + + + P T+ G I Sbjct: 395 NFVETAKKVSEDPGSKDQGGELGWVDSNTNFVPEFLEAIKSAQKGQIIGPVQTEFGSHII 454 Query: 271 AICDKRDLGGEIALKAYLSAQNT-PTKIEKHEAEYVKKLRSN 311 + D + +++ K + + L+ Sbjct: 455 YVEDVDSANPDKKKVSHILLLPKPSEASRKELVDRLDTLKKE 496 Score = 42.7 bits (98), Expect = 0.075, Method: Composition-based stats. Identities = 28/281 (9%), Positives = 85/281 (30%), Gaps = 22/281 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCI---VPIVSYKSWAMSSRIRTTINGEVITDGDIS 57 M + F L + +L +L+ + I + K+ ++ + +NG I D+ Sbjct: 1 MALRKFKKLMVPLSVLFIAAMLVPIFLKIGESIRAGKNIQQNNEVIAEVNGHKIHRLDLE 60 Query: 58 K----------RIALLKLQK--------INGELEKIAVQELIVETLKKQEIEKSGITFDS 99 + +I +K Q+ + ++K+ + EL+ L E I Sbjct: 61 RGVAGVKNKIMQIKSMKAQQGIEDNSEVPDDIIKKVILGELVSNALLVSSAEDLKIKASD 120 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 +N + + + K+ + V++ + Sbjct: 121 KEINDKINEIKAGVAKGESFLNYLQSMGIANEKELKRMIKESIEVSRVLETQQKAHKLSE 180 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 E + + + + ++ + + + + ++ +++ Sbjct: 181 EDLKKYYEMYRYTDFQDQTFEQAKPTIEDYVGKEYSDLIRNSLIEKQREKAKIVFKDDEI 240 Query: 220 EKFASKIHDVSIGKAQY-LLESDLHPQFQNLLKKSQNNTTN 259 +K ++ K Y E+ + + ++ + + Sbjct: 241 KKLYEEMVRPIAEKEGYSFKEALMDTRILMMVVSTGTEYSE 281 >gi|217033711|ref|ZP_03439138.1| hypothetical protein HP9810_5g53 [Helicobacter pylori 98-10] gi|216943900|gb|EEC23337.1| hypothetical protein HP9810_5g53 [Helicobacter pylori 98-10] Length = 411 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 89/289 (30%), Gaps = 37/289 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 147 AGSTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 200 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 201 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 259 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + + NQ +++ + + Sbjct: 260 NILLTNVDTSSETKMREYYNKHKEQFSIPTEIETVRY----TSTNQEDLERAMSNPNLEV 315 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG--- 266 + K K + L+PQ + + + P + G Sbjct: 316 PGVSKANEK------------------IEMKTLNPQIAQVFISHEQGSFTPIMNGGGGQF 357 Query: 267 -VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 YI ++ K +++ + +K E+ +KLR + I Sbjct: 358 ITFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 406 >gi|125601574|gb|EAZ41150.1| hypothetical protein OsJ_25646 [Oryza sativa Japonica Group] Length = 239 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 12/118 (10%), Positives = 35/118 (29%), Gaps = 8/118 (6%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 + + +++ + G ++ + P+F+ + N T+ Sbjct: 53 KNIITGGADLSDLAVEYSLCPSKENGGMLGWVRRGQMVPEFEEAAFGAPLNKVVRCKTKF 112 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS-----NAIIHYY 317 G + + +R+ E L A+ + + +R A + + Sbjct: 113 GWHLLQVLAEREQCVVEDIPPEELHAKMQDPNFLEEAQ--LIDVREPDEVDKASLEGF 168 >gi|125559665|gb|EAZ05201.1| hypothetical protein OsI_27400 [Oryza sativa Indica Group] Length = 302 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 12/118 (10%), Positives = 35/118 (29%), Gaps = 8/118 (6%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 + + +++ + G ++ + P+F+ + N T+ Sbjct: 116 KNIITGGADLSDLAVEYSLCPSKENGGMLGWVRRGQMVPEFEEAAFGAPLNKVVRCKTKF 175 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS-----NAIIHYY 317 G + + +R+ E L A+ + + +R A + + Sbjct: 176 GWHLLQVLAEREQCVVEDIPPEELHAKMQDPNFLEEAQ--LIDVREPDEVDKASLEGF 231 >gi|115474191|ref|NP_001060694.1| Os07g0687500 [Oryza sativa Japonica Group] gi|50509156|dbj|BAD30296.1| peptidyl-prolyl cis-trans isomerase-like protein [Oryza sativa Japonica Group] gi|113612230|dbj|BAF22608.1| Os07g0687500 [Oryza sativa Japonica Group] Length = 302 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 12/118 (10%), Positives = 35/118 (29%), Gaps = 8/118 (6%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 + + +++ + G ++ + P+F+ + N T+ Sbjct: 116 KNIITGGADLSDLAVEYSLCPSKENGGMLGWVRRGQMVPEFEEAAFGAPLNKVVRCKTKF 175 Query: 266 GVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS-----NAIIHYY 317 G + + +R+ E L A+ + + +R A + + Sbjct: 176 GWHLLQVLAEREQCVVEDIPPEELHAKMQDPNFLEEAQ--LIDVREPDEVDKASLEGF 231 >gi|157368404|ref|YP_001476393.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Serratia proteamaculans 568] gi|157320168|gb|ABV39265.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Serratia proteamaculans 568] Length = 111 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 21/76 (27%), Gaps = 1/76 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +K + R K+++ + G + + F + + Sbjct: 33 EKLADELLAKLKRGVSFDTLARKYSTCPSKRNGGSLGEFNKGTMVAAFDKAVFSIPLLKP 92 Query: 258 TNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 93 YGPVKTQFGYHIIKVL 108 >gi|27367962|ref|NP_763489.1| peptidyl-prolyl cis-trans isomerase ppiC [Vibrio vulnificus CMCP6] gi|37676090|ref|NP_936486.1| parvulin-like peptidyl-prolyl isomerase [Vibrio vulnificus YJ016] gi|320158234|ref|YP_004190612.1| peptidyl-prolyl cis-trans isomerase ppiC [Vibrio vulnificus MO6-24/O] gi|27359535|gb|AAO08479.1| Peptidyl-prolyl cis-trans isomerase ppiC [Vibrio vulnificus CMCP6] gi|37200630|dbj|BAC96456.1| parvulin-like peptidyl-prolyl isomerase [Vibrio vulnificus YJ016] gi|319933546|gb|ADV88409.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio vulnificus MO6-24/O] Length = 92 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 22/77 (28%), Gaps = 4/77 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + K +K + G + PQF + Sbjct: 15 KEQAEDIIAQLKKGAKFHVLAKKHSLCPSGKRGGDLGEFKRGQMVPQFDKV--CFTGEVL 72 Query: 259 NP--YVTQKGVEYIAIC 273 P T+ G + + Sbjct: 73 TPHLVKTKFGWHVLKVL 89 >gi|16762221|ref|NP_457838.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16767186|ref|NP_462801.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143710|ref|NP_807052.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415769|ref|YP_152844.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62182385|ref|YP_218802.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161617027|ref|YP_001590992.1| hypothetical protein SPAB_04855 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167553321|ref|ZP_02347071.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994605|ref|ZP_02575696.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168234229|ref|ZP_02659287.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168238365|ref|ZP_02663423.1| peptidyl-prolyl cis-trans isomerase C (PPIase C) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244961|ref|ZP_02669893.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263199|ref|ZP_02685172.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168822964|ref|ZP_02834964.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446230|ref|YP_002043149.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451515|ref|YP_002047932.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470361|ref|ZP_03076345.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735487|ref|YP_002116844.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197264763|ref|ZP_03164837.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197364698|ref|YP_002144335.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198245194|ref|YP_002217849.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200388005|ref|ZP_03214617.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204930319|ref|ZP_03221296.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205354518|ref|YP_002228319.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859123|ref|YP_002245774.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213027842|ref|ZP_03342289.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213051681|ref|ZP_03344559.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213421551|ref|ZP_03354617.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425874|ref|ZP_03358624.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581335|ref|ZP_03363161.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609769|ref|ZP_03369595.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213648396|ref|ZP_03378449.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213864702|ref|ZP_03386821.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224585732|ref|YP_002639531.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238912918|ref|ZP_04656755.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825744|ref|ZP_06544912.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|61229953|sp|P0A265|PPIC_SALTY RecName: Full=Peptidyl-prolyl cis-trans isomerase C; Short=PPIase C; AltName: Full=Parvulin; AltName: Full=Rotamase C gi|61229954|sp|P0A266|PPIC_SALTI RecName: Full=Peptidyl-prolyl cis-trans isomerase C; Short=PPIase C; AltName: Full=Parvulin; AltName: Full=Rotamase C gi|25512550|pir||AE0923 peptidyl-prolyl cis-trans isomerase C [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|6960285|gb|AAF33475.1| 95% identity with E. coli peptidyl-prolyl cis-trans isomerase C (PPIC) (SPP39159); contains similarity to Pfam family PF00639 (PPIC-type PPIASE domain), score=155.9, E=6.8e-43, N=1 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16422478|gb|AAL22760.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504525|emb|CAD09407.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhi] gi|29139345|gb|AAO70912.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56130026|gb|AAV79532.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62130018|gb|AAX67721.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161366391|gb|ABX70159.1| hypothetical protein SPAB_04855 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404893|gb|ACF65115.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194409819|gb|ACF70038.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456725|gb|EDX45564.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194710989|gb|ACF90210.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197096175|emb|CAR61771.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197243018|gb|EDY25638.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288728|gb|EDY28103.1| peptidyl-prolyl cis-trans isomerase C (PPIase C) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197939710|gb|ACH77043.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605103|gb|EDZ03648.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320723|gb|EDZ05925.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205274299|emb|CAR39321.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205322213|gb|EDZ10052.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327563|gb|EDZ14327.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205331808|gb|EDZ18572.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336238|gb|EDZ23002.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205340710|gb|EDZ27474.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348090|gb|EDZ34721.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710926|emb|CAR35291.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224470260|gb|ACN48090.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261249040|emb|CBG26898.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996191|gb|ACY91076.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160432|emb|CBW19959.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915033|dbj|BAJ39007.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320088327|emb|CBY98087.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321225436|gb|EFX50493.1| Peptidyl-prolyl cis-trans isomerase ppiC [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322612992|gb|EFY09943.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617420|gb|EFY14320.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625588|gb|EFY22410.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627011|gb|EFY23804.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631273|gb|EFY28036.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638306|gb|EFY35005.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642844|gb|EFY39430.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647000|gb|EFY43502.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650388|gb|EFY46801.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656322|gb|EFY52616.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657547|gb|EFY53817.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665958|gb|EFY62139.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666697|gb|EFY62874.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671060|gb|EFY67190.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322679233|gb|EFY75285.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681637|gb|EFY77664.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686036|gb|EFY82024.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716878|gb|EFZ08449.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323132263|gb|ADX19693.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192662|gb|EFZ77890.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197831|gb|EFZ82962.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203720|gb|EFZ88741.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205405|gb|EFZ90379.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210776|gb|EFZ95652.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215942|gb|EGA00675.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221435|gb|EGA05853.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227335|gb|EGA11502.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231732|gb|EGA15843.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236147|gb|EGA20224.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239616|gb|EGA23664.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244288|gb|EGA28296.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249615|gb|EGA33527.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250293|gb|EGA34179.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256500|gb|EGA40231.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259802|gb|EGA43435.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265210|gb|EGA48708.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268361|gb|EGA51833.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625636|gb|EGE31981.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629653|gb|EGE35996.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332990751|gb|AEF09734.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 93 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 23/81 (28%), Gaps = 1/81 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + Sbjct: 13 KEEKLALDLLEQIKNGGDFEKLAKKHSICPSGKKGGHLGEFRQGQMVPAFDKVVFSCPVL 72 Query: 256 NTTNPYVTQKGVEYIAICDKR 276 T P TQ G I + ++ Sbjct: 73 EPTGPLHTQFGYHIIKVLYRK 93 >gi|148260583|ref|YP_001234710.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidiphilium cryptum JF-5] gi|326403778|ref|YP_004283860.1| putative peptidylprolyl isomerase [Acidiphilium multivorum AIU301] gi|146402264|gb|ABQ30791.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidiphilium cryptum JF-5] gi|325050640|dbj|BAJ80978.1| putative peptidylprolyl isomerase [Acidiphilium multivorum AIU301] Length = 248 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 13/159 (8%), Positives = 39/159 (24%), Gaps = 5/159 (3%) Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + + + + T + +L + + + + P Sbjct: 79 DVSEADCRAEFARHRARFRTPPLFEAAHILIAADMSSEDARAPARAEAARLASLLAARPD 138 Query: 215 -DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGVEYIA 271 + ++ G + D+ P+ ++ + P T+ G + Sbjct: 139 SFARLAREHSACPSGADGGGLGQITARDVTPEIASMLAAMTPGTICPVPVPTRHGYHLLR 198 Query: 272 ICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + + D A++ + Y L Sbjct: 199 LDRREDGRDLPFEAVRDRIRDHLRQRAWLDAARAYAATL 237 >gi|326334983|ref|ZP_08201183.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692788|gb|EGD34727.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 707 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 25/258 (9%), Positives = 63/258 (24%), Gaps = 18/258 (6%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAV-----------QELIVETLKKQEIEKSGITFD 98 I+D +I + K Q ++ + ++ I + LK + Sbjct: 211 KISDNEIQDYVKAHKKQYQQKDMRNLQFVLASEVASPEDKKAIEQDLKALNNPRILYNNQ 270 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 + + AE + D K L + + L Sbjct: 271 TQKSDTLPGFSQVPLKDIAEFVNENSDTPFDSLYVSKDKLPVNFADTLYNLSIGELYGPY 330 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDN------KLQNQGFVQKRIKDAEESRLRL 212 + + + I E +L + + + + + + + Sbjct: 331 QDGNAYKYTRMLSKIPNGEVRASHILIAYQGSLPGNDAITRTKEEAKAKAEGILAQIKAG 390 Query: 213 PKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIA 271 + + + G + + F + + ++ T G I Sbjct: 391 GDYTALAQANSDDASNAQNGGDLDFFSRGMMVQPFNDYVFHAKVGDIGLVETNFGFHIIK 450 Query: 272 ICDKRDLGGEIALKAYLS 289 I D R+ + + Sbjct: 451 ITDLREGVKLATITRNIE 468 Score = 41.2 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 20/63 (31%), Gaps = 1/63 (1%) Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 N + P V GV I + K D+ + + K+ + + L A Sbjct: 639 PPNKVSKPIVGDNGVYVIQVIQK-DVAPALPNYSSYMGILRNQKLNRASQDLFSALEQTA 697 Query: 313 IIH 315 I Sbjct: 698 EIK 700 >gi|56757089|gb|AAW26716.1| SJCHGC03333 protein [Schistosoma japonicum] Length = 136 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 27/87 (31%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK---- 252 + +A E + E ++ S G ++ + FQ+ Sbjct: 51 EKYSKCLEALEQLKNGKRFNQVAELYSED-KARSGGDLGWMSRGSMVGAFQDAAFNLPVS 109 Query: 253 ---SQNNTTNPYVTQKGVEYIAICDKR 276 + T +P TQ G I + +R Sbjct: 110 TLENPKYTVSPVKTQYGYHIIMVEGRR 136 >gi|85711461|ref|ZP_01042519.1| Parvulin-like peptidyl-prolyl isomerase [Idiomarina baltica OS145] gi|85694613|gb|EAQ32553.1| Parvulin-like peptidyl-prolyl isomerase [Idiomarina baltica OS145] Length = 92 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 9/73 (12%), Positives = 19/73 (26%), Gaps = 1/73 (1%) Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN-NTTNPYV 262 + ++ K + K + G ++ P F ++ P Sbjct: 19 ELKKQLANGAKFADLARKHSLCPSGKQGGDLGEFRRGEMVPAFDKVVFGQPTLEVHGPVK 78 Query: 263 TQKGVEYIAICDK 275 T G I + Sbjct: 79 TAFGYHLIKTLSR 91 >gi|332978701|gb|EGK15395.1| peptidyl-prolyl cis-trans isomerase [Psychrobacter sp. 1501(2011)] Length = 92 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 7/80 (8%), Positives = 23/80 (28%), Gaps = 4/80 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 ++ ++ + +K ++ G + + P F + Sbjct: 15 KELAEEIIAKLKKGAHFDVLAKKHSTCPSGKKGGDLGEFRKGQMVPAFDKV--CFNGELL 72 Query: 259 NP--YVTQKGVEYIAICDKR 276 P T+ G + + ++ Sbjct: 73 TPHLVKTKFGWHVVKVLYRK 92 >gi|239995310|ref|ZP_04715834.1| peptidyl-prolyl cis-trans isomerase C [Alteromonas macleodii ATCC 27126] gi|332143295|ref|YP_004429033.1| peptidyl-prolyl cis-trans isomerase C [Alteromonas macleodii str. 'Deep ecotype'] gi|327553317|gb|AEB00036.1| peptidyl-prolyl cis-trans isomerase C [Alteromonas macleodii str. 'Deep ecotype'] Length = 93 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 9/76 (11%), Positives = 19/76 (25%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN- 255 +K E + ++ + G + F +++ K Sbjct: 12 KTEKEALSILEQLKKGKDFATLAKRHSKCPSGKRGGDLGEFRRGQMVKAFDDVVFKKDVL 71 Query: 256 NTTNPYVTQKGVEYIA 271 P T+ G I Sbjct: 72 KVHGPVKTRFGYHLIK 87 >gi|91793769|ref|YP_563420.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella denitrificans OS217] gi|91715771|gb|ABE55697.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella denitrificans OS217] Length = 92 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 9/76 (11%), Positives = 23/76 (30%), Gaps = 1/76 (1%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN 259 +D ++ + + +S G + +F ++ + N Sbjct: 16 ECEDLKQQIIAGADFAQIAREHSSCPSAAEGGNLGSFGPGMMVQEFDAVVFSAPLNEVQG 75 Query: 260 PYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 76 PVKTQFGYHLLEVTQR 91 >gi|150026459|ref|YP_001297285.1| hypothetical protein FP2430 [Flavobacterium psychrophilum JIP02/86] gi|149773000|emb|CAL44484.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86] Length = 701 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 24/99 (24%) Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 K + K + + + G Y + + F N Sbjct: 369 EKRTKEQAKAKAVSLLAQVLANPSAFQMLAYTNSDDSSSQQGGDLGYFSQGQMVKPFNNF 428 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + + T G I + DK+D L + Sbjct: 429 VFSNPVGKIGLVETDFGFHIINVTDKQDAVRLATLAQKI 467 >gi|299148146|ref|ZP_07041208.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_23] gi|298512907|gb|EFI36794.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_23] Length = 516 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 19/290 (6%), Positives = 74/290 (25%), Gaps = 40/290 (13%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 ++ + + +A + +NG I + + Sbjct: 7 LLLGCISLFVVAVFAQEDPVLMRVNGREILRSEFEYAYRRYAERS--------------- 51 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 ++ + + + L E + ++ + Sbjct: 52 ---------------NARLSSKEYAALFAQSKLKVEAARAAGLDTTSIFRKQQEKCRTEL 96 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + ++ M + K + + V + R + + + + Sbjct: 97 VESYLIDRQVMDSCARAIYQKMGLKARSGRVQVMQIFKRLPQTITSRHLEEEKTRMDSIY 156 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL-ESDLHPQFQNLLKKSQNNTTNPY 261 + + +E ++ ++ ++ + P+ Sbjct: 157 RMIQNQPD--LNFNRLVEIYSDDKQSR------WIECLETTSEFENVAFSLAKGMASQPF 208 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK-IEKHEAEYVKKLRS 310 T +G+ + + D+ + + A L + + ++K +++L+ Sbjct: 209 FTPEGIHILKVMDREETAAYENVSARLMERLRRKEILDKGTGAVLERLKK 258 >gi|227511814|ref|ZP_03941863.1| peptidylprolyl isomerase [Lactobacillus buchneri ATCC 11577] gi|227084904|gb|EEI20216.1| peptidylprolyl isomerase [Lactobacillus buchneri ATCC 11577] Length = 295 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 90/285 (31%), Gaps = 34/285 (11%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 ++ FV++ ++ + S TING IT + + + Sbjct: 2 IMKKGFVILAGIGAGLILSACSSQS---VATINGSNITKDAYYQEMK-------ESPSGQ 51 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A+ ++I++ + ++ G + V + G FS+FL + G+ + + Sbjct: 52 QALGQMILDKGLE---KQYGNKVKNTAVTRQLNTVKKQYG---ASFSAFLTQNGLTASQY 105 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 K+ L + +K + G L+ + + K+ L + Sbjct: 106 KRNLKEDLLLKAAIKANTKFTPGMLKQQFKHYQPKVTVNQ----------------ILVS 149 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-S 253 + +++ D + K A+ + L P F+ K Sbjct: 150 KKATAQKVIDQLNAGHSFAKLATAYSTDAATKKKSGRISPFDNTNTTLDPNFKKAAFKLK 209 Query: 254 QNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 T P TQ G E I + + G K L Q TK Sbjct: 210 TGQYTKTPVKTQYGYEVIQMVNHPAKGTHQNHKEALKNQIVDTKA 254 >gi|197249971|ref|YP_002148838.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197213674|gb|ACH51071.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 93 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 23/81 (28%), Gaps = 1/81 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + Sbjct: 13 KEEKLALDLLEQIKNGGDFEKLAKKHSICPSGKKGGHLGEFRQGQMVPAFDKVVFSCPVL 72 Query: 256 NTTNPYVTQKGVEYIAICDKR 276 T P TQ G I + ++ Sbjct: 73 EPTGPLHTQFGYHIIKVLYRK 93 >gi|332025211|gb|EGI65389.1| Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Acromyrmex echinatior] Length = 162 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 9/92 (9%), Positives = 21/92 (22%), Gaps = 1/92 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + + E+ K++ G Sbjct: 68 RPSSWREENITRSKEEALDLVKSYREQIASGKATFAELASKYSDCSSAKRGGDLGPFSRG 127 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + F+ ++P T G+ I Sbjct: 128 AMQKPFEQAAFALKVGELSSPVHTDSGIHIIQ 159 >gi|84385275|ref|ZP_00988307.1| peptidyl-prolyl cis-trans isomerase [Vibrio splendidus 12B01] gi|84379872|gb|EAP96723.1| peptidyl-prolyl cis-trans isomerase [Vibrio splendidus 12B01] Length = 92 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 25/75 (33%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 ++ +D + + K +K ++ G + + PQF + + Sbjct: 15 KEVAEDIIKQLKKGAKFQTLAKKHSTCPSGKKGGDLGEFKKGQMVPQFDKVCFSGETLVP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G + + Sbjct: 75 HLVKTKFGWHVVKVL 89 >gi|238020925|ref|ZP_04601351.1| hypothetical protein GCWU000324_00822 [Kingella oralis ATCC 51147] gi|237867905|gb|EEP68911.1| hypothetical protein GCWU000324_00822 [Kingella oralis ATCC 51147] Length = 290 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 69/278 (24%), Gaps = 21/278 (7%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 T+NG I ++ +R+ + + +++ I + Sbjct: 24 VVTVNGTKIDSSELDRRVQAVVAGSQGQVQDSPELRQFIAQQTVL------ETVVTQAAK 77 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + +E + FKQ A ++ + N Sbjct: 78 KQGLDKSKEYKDAESESMKQAKAQGADKQADFKQQWAD--YQNQLLMQVYARDVINKNPV 135 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 A Q+ N + Y + + E K+ Sbjct: 136 TDAQVQQRYNEIKQRYDNTDEVQIGEIITDNAEQIKAA-----ERDLKAKKSFAEVARKY 190 Query: 223 ASKIHDVSIGKA--QYLLESDL----HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 + + + G Y+ DL +Q + + + P K I DKR Sbjct: 191 SIDPNIKAGGAVFSDYISLRDLQEARPNIYQAIGSLKKGQYSKPISGDKLHAVYYINDKR 250 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + E + + E V L NA I Sbjct: 251 KISIE--PLDKIKEGLRAGLANERVQEAVGNLMQNASI 286 >gi|254418583|ref|ZP_05032307.1| PPIC-type PPIASE domain protein [Brevundimonas sp. BAL3] gi|196184760|gb|EDX79736.1| PPIC-type PPIASE domain protein [Brevundimonas sp. BAL3] Length = 367 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 17/179 (9%), Positives = 52/179 (29%), Gaps = 6/179 (3%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 +++ V++ + ++ + + K + + P + + Sbjct: 68 EEALIRAVLEAEILVDAPSRDECRRVYDHAPKRFCTPALTEASHILLAPQTQDEAAWAEA 127 Query: 200 KRIKDAEESRLRLPKD--CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257 + A + L + ++ + G + DL + + L Q+ Sbjct: 128 QAAAKAAITELAAYPHRFADLAQRLSDCPSKGVGGSLGQISPGDLAAEVEAGLDALQDGE 187 Query: 258 --TNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + P ++ G + + + + + ++ A YV L + A Sbjct: 188 TASEPVRSRFGWHVLRLDRRIEGRQLPFEHVLPRIALHLESRAWTAAAARYVSGLAAEA 246 >gi|90567994|dbj|BAE92208.1| peptidyl-prolyl cis-trans isomerase C [Flavobacterium psychrophilum] Length = 701 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 24/99 (24%) Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 K + K + + + G Y + + F N Sbjct: 369 EKRTKEQAKAKAVSLLAQVLANPSAFQMLAYTNSDDSSSQQGGDLGYFSQGQMVKPFNNF 428 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + + T G I + DK+D L + Sbjct: 429 VFSNPVGKIGLVETDFGFHIINVTDKQDAVRLATLAQKI 467 >gi|88606731|ref|YP_504706.1| hypothetical protein APH_0074 [Anaplasma phagocytophilum HZ] gi|88597794|gb|ABD43264.1| conserved hypothetical protein [Anaplasma phagocytophilum HZ] Length = 393 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 36/264 (13%), Positives = 81/264 (30%), Gaps = 14/264 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI---ALLKLQKINGEL 72 ++ +F + F + I K A +I ++ +V+T D+ +R Sbjct: 1 MSRWFPWLCFLCLVIPCGKGCASV-KIEAVVDDKVLTSLDVDRREHANGFFYKTAYAEGN 59 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFLDKQGIGD 131 + + LI E + + E ++ GIT + V + GL + G+ Sbjct: 60 RREVLGLLIDEVILELEAKQLGITVEKQEVAQEVERLFSVLGLCSGLSLDECAAGNGLDA 119 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + ++ + IW ++ + E+ + K+ + L +F Sbjct: 120 ASIESHVRSRVIWSKILSTRVAPFLSVADDEVSQYVAEAKSDALETVLDLEQVFVPFR-A 178 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 V + E + + ++G + S L + Sbjct: 179 GAVLDSVASELHKGVELTKIAERYREHGVYVDRTMGASAVGFVHDVKVSLL--------R 230 Query: 252 KSQNNTTNPYVTQKGVEYIAICDK 275 + + P KG + + K Sbjct: 231 AKEGSIIGPVRIDKGHLLLKLLSK 254 >gi|307132747|ref|YP_003884763.1| peptidyl-prolyl cis-trans isomerase ppiD [Dickeya dadantii 3937] gi|306530276|gb|ADN00207.1| Peptidyl-prolyl cis-trans isomerase ppiD [Dickeya dadantii 3937] Length = 270 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 15/135 (11%), Positives = 40/135 (29%), Gaps = 2/135 (1%) Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 E+ ++ + R T + + + Q+ + R Sbjct: 114 EPQPAEVRRWYRQHADRFRRPEQRLTRHLLLTVDGNRPSVD-QQVAGMLRQLRADPDGFA 172 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 + ++ + + G ++ L P ++ L + + P T+ G+ + Sbjct: 173 SLAQRHSHCPTALEGGLMGWVSRGLLFPALEHCLFALAAGELSEPVETELGLHLLRCEAI 232 Query: 276 RDLGGEIALKAYLSA 290 R +A + A Sbjct: 233 RPAAPLPEAEALVKA 247 >gi|167950935|ref|ZP_02538009.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 79 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 1/69 (1%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + +I + I F + I Y A + + ++N E IT+ D+ +R Sbjct: 1 MLQAIRDKAQGWIAWAIVILISIPFALWGIQEYLG-AGAEPVVASVNDEEITERDLDQRF 59 Query: 61 ALLKLQKIN 69 + Q Sbjct: 60 NTFRQQLRE 68 >gi|225715790|gb|ACO13741.1| Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Esox lucius] Length = 142 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 26/87 (29%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + +A E + +++ G ++ + FQ+ N+ Sbjct: 57 EKHSKCMEAMEKLKAGVRFSEVASQYSED-KARQGGDLGWMTRGSMTGPFQDAAFALPNS 115 Query: 257 TT-------NPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 116 TMDKPIYTDPPVKTKFGYHIIMVEGKK 142 >gi|168467674|ref|ZP_02701511.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195629962|gb|EDX48622.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 93 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 23/81 (28%), Gaps = 1/81 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + Sbjct: 13 KEEKLALDLLEQIKNGGDFEKLAKKHSICPSGKKGGHLGEFRQGQMVPAFDKVVFFCPVL 72 Query: 256 NTTNPYVTQKGVEYIAICDKR 276 T P TQ G I + ++ Sbjct: 73 EPTGPLHTQFGYHIIKVLYRK 93 >gi|307610560|emb|CBX00148.1| hypothetical protein LPW_18931 [Legionella pneumophila 130b] Length = 316 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 25/218 (11%), Positives = 57/218 (26%), Gaps = 8/218 (3%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ + + L + I F + + Y S + +N + IT Sbjct: 1 MLQKLNEHIQGVVAWLVIILIAITFTLFGVDYYFQSRQISDAKVIVNDKPITMQAFETNY 60 Query: 61 ALLKLQK--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + Q+ L+ + ++I + Q K G N VQ + Sbjct: 61 RRTRAQQDLPQMTAADEKNLQNQVLNQMITNEVSIQAARKYGFEVSPEQANAAIVQIPQF 120 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + + F + + + Sbjct: 121 QEDGHFSAQRYQQALSGALFTPETFQKEVRQGMLLNQQRFAFMGTSFALSDEIKRFVRLY 180 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + R+Y TV + + + K + + Sbjct: 181 MQTRDYDYLTVPSDRFEQQAKISEDDIKSYYNQHHKKF 218 >gi|109898004|ref|YP_661259.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudoalteromonas atlantica T6c] gi|109700285|gb|ABG40205.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudoalteromonas atlantica T6c] Length = 91 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 21/76 (27%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN- 255 +K + + + +K + G + F +++ K + Sbjct: 11 KTEKEAQQLKAQLDKGANFQQLAKKHSLCPSGKKGGDLGEFSPGTMVKAFDSVVFKKEIL 70 Query: 256 NTTNPYVTQKGVEYIA 271 P TQ G I Sbjct: 71 TVHGPVKTQFGYHLIK 86 >gi|119468650|ref|ZP_01611702.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Alteromonadales bacterium TW-7] gi|119447706|gb|EAW28972.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Alteromonadales bacterium TW-7] Length = 92 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 24/75 (32%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 ++ +D + + K +K++S G + PQF + Sbjct: 15 KEIAEDIIKQLGKGAKFQTLAKKYSSCPSGKKGGDLGEFRRGQMVPQFDKIAFNGAILEP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G I + Sbjct: 75 HLVKTKFGWHVIKVL 89 >gi|238021983|ref|ZP_04602409.1| hypothetical protein GCWU000324_01888 [Kingella oralis ATCC 51147] gi|237866597|gb|EEP67639.1| hypothetical protein GCWU000324_01888 [Kingella oralis ATCC 51147] Length = 610 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 16/165 (9%), Positives = 46/165 (27%), Gaps = 7/165 (4%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 D K + EI A K + + +L P + + + + Sbjct: 222 KDIAGKQSVSDAEIEAAYNASKGSLKPKRRVSHILIEAPKSADAATREKARAEAEKIAAE 281 Query: 210 LRL--PKDCNKLEKFASKI-HDVSIGKAQYLLESD---LHPQFQNLLKKSQNNTTNPYVT 263 + + ++ + + + G + + ++ + + Sbjct: 282 AKAHPEQFAEIAKRASQDVGSAANGGDLGEIAQDGKIGSKALEDAAFALNKGEVSGVVES 341 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 G + + D D+ A K + + K ++ + + L Sbjct: 342 DFGYHVLRVTDIADVSL-AAQKDSIRSSLQAKKAQQEYNKQREAL 385 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 62/216 (28%), Gaps = 4/216 (1%) Query: 5 VFTSLSDFIK--LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL 62 +F S++ F + + + F VS + + + I + ++IT + + + Sbjct: 1 MFHSVNKFRTPVTILLSLIAVSFMGYGFVSLQGISRDNYIV-KVGDQIITRYALDQAVQN 59 Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 + + Q L+ + ++ GI + V + + S + Sbjct: 60 TEA-AGEPASREAVFQTLLQRAYLLEGAKQLGIVVSDEQIKQIVVDNPQFHDTSGKFDPK 118 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 ++ V N + A + + R Sbjct: 119 LFQAYLTNTRQSEESFMQAQRENLSVAALLQTLNSNAVSDFQAQQVINAVLAPRSTRAYV 178 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + +K++ K+ +A + LP+ Sbjct: 179 LNPQAFADKVKADDAALKKYYEANKKDYLLPQGAKF 214 >gi|91087021|ref|XP_974228.1| PREDICTED: similar to peptidyl-prolyl cis-trans isomerase [Tribolium castaneum] gi|270010516|gb|EFA06964.1| hypothetical protein TcasGA2_TC009923 [Tribolium castaneum] Length = 128 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 25/87 (28%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------L 249 Q + +A E K ++ G ++ + FQ+ Sbjct: 43 EKQGKCLEALEKLKAGQKFPEVAAAYSED-KARQGGDLGWMTRGSMVGPFQDAAFALPVS 101 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKR 276 + T P T+ G I + K+ Sbjct: 102 NVNNPVYTDPPVKTKFGYHIIMVEGKK 128 >gi|324997548|ref|ZP_08118660.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudonocardia sp. P1] Length = 475 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 27/293 (9%), Positives = 79/293 (26%), Gaps = 24/293 (8%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA-VQE------------LIVETLK 86 + +G+ +T D+++++ L + ++ A + ++++ Sbjct: 164 DDVAFRADGQDVTVEDLNRQMDTLSALYGMTKPQEPAELDTYQRDFAKASAIGMVIDRAA 223 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 + + + + Q+ N + F L + G + + Q Sbjct: 224 AERGIVVAERAAQDYLGRYIEQYFGNGADARAAFVEALGQAGTSEPAVLGEIKRQMAAAQ 283 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 + + + ++ ++ + D Q + Sbjct: 284 LFQQVTADIPQVTDADVETAFGDRRDALAMPERRAVSNIVVRDEAAAQQILGDLQGGRPF 343 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT-NPYVTQK 265 R + A + G L + L F + ++ N P TQ Sbjct: 344 ADVAR--------ARSADAATREAGGAIGTLAAAQLEKPFADAAFGAEPNVPFGPVKTQH 395 Query: 266 GVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G + + + ++ L + + ++ +A + Y Sbjct: 396 GWNVGVVSEVQAAVPADLQTVREPLRQRLQGERSADAWQAFLGNRLDDAGVRY 448 >gi|315586661|gb|ADU41042.1| SurA domain protein [Helicobacter pylori 35A] Length = 405 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 89/289 (30%), Gaps = 37/289 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 141 AGSTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 194 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 195 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 253 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + + NQ +++ + + Sbjct: 254 NILLTNVDTSSETKMREYYNKHKEQFSIPTEIETVRY----TSTNQEDLERAMSNPNLEV 309 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG--- 266 + K K + L+PQ + + + P + G Sbjct: 310 PGVSKANEK------------------IEMKTLNPQIAQVFISHEQGSFTPIMNGGGGQF 351 Query: 267 -VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 YI ++ K +++ + +K E+ +KLR + I Sbjct: 352 ITFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 400 >gi|297519828|ref|ZP_06938214.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli OP50] Length = 141 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 16/140 (11%), Positives = 38/140 (27%), Gaps = 17/140 (12%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y ++ +N + I+ G Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQEISRGQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119 Query: 105 FFVQHARNTGLSAEDFSSFL 124 D S + Sbjct: 120 AIFATPAFQVDGKFDNSRYN 139 >gi|156935892|ref|YP_001439808.1| hypothetical protein ESA_03780 [Cronobacter sakazakii ATCC BAA-894] gi|161505574|ref|YP_001572686.1| hypothetical protein SARI_03744 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|311281540|ref|YP_003943771.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterobacter cloacae SCF1] gi|156534146|gb|ABU78972.1| hypothetical protein ESA_03780 [Cronobacter sakazakii ATCC BAA-894] gi|160866921|gb|ABX23544.1| hypothetical protein SARI_03744 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] gi|308750735|gb|ADO50487.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterobacter cloacae SCF1] Length = 93 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 21/78 (26%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + Sbjct: 13 KEEKLALDLLEQIKNGGDFEKLAKKHSICPSGKKGGHLGEFRQGQMVPAFDKVVFSCPVL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 T P TQ G I + Sbjct: 73 EPTGPLHTQFGYHIIKVL 90 >gi|256084172|ref|XP_002578305.1| rotamase [Schistosoma mansoni] gi|238663674|emb|CAZ34543.1| rotamase, putative [Schistosoma mansoni] Length = 1421 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 27/87 (31%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK---- 252 Q + +A E + E ++ S G ++ + FQ+ Sbjct: 1336 EKQSKCLEALEQLKNGKRFNQVAEIYSED-KARSGGDLGWMSRGSMVGAFQDAAFNLPIS 1394 Query: 253 ---SQNNTTNPYVTQKGVEYIAICDKR 276 + T P TQ G I + +R Sbjct: 1395 TLENPKYTDPPVKTQYGYHIIMVEGRR 1421 >gi|170585656|ref|XP_001897598.1| parvulin-type peptidyl-prolyl cis-trans isomerase, Bm parvulin [Brugia malayi] gi|158594905|gb|EDP33482.1| parvulin-type peptidyl-prolyl cis-trans isomerase, Bm parvulin [Brugia malayi] Length = 126 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 26/87 (29%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q + +A E K ++ G ++ + FQ+ N+ Sbjct: 41 EKQGKAMEAIEKLKSGSKFNEVAANYSED-KAKLGGDLGWMTRGSMVGTFQDAAFALPNS 99 Query: 257 TT-------NPYVTQKGVEYIAICDKR 276 T P TQ G I + K+ Sbjct: 100 TVDRPVYTDPPVRTQFGYHIIMVEAKK 126 >gi|317178978|dbj|BAJ56766.1| hypothetical protein HPF30_0669 [Helicobacter pylori F30] Length = 416 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 89/289 (30%), Gaps = 37/289 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 152 AGSTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 205 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 206 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 264 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + + NQ +++ + + Sbjct: 265 NILLTNVDTSSETKMREYYNKHKEQFSIPTEIETVRY----TSTNQEDLERAMSNPNLEV 320 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG--- 266 + K K + L+PQ + + + P + G Sbjct: 321 PGVSKANEK------------------IEMKTLNPQIAQVFISHEQGSFTPIMNGGGGQF 362 Query: 267 -VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 YI ++ K +++ + +K E+ +KLR + I Sbjct: 363 ITFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 411 >gi|254372658|ref|ZP_04988147.1| hypothetical protein FTCG_00222 [Francisella tularensis subsp. novicida GA99-3549] gi|254374119|ref|ZP_04989601.1| peptidylprolyl isomerase [Francisella novicida GA99-3548] gi|151570385|gb|EDN36039.1| hypothetical protein FTCG_00222 [Francisella novicida GA99-3549] gi|151571839|gb|EDN37493.1| peptidylprolyl isomerase [Francisella novicida GA99-3548] Length = 92 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 22/81 (27%), Gaps = 2/81 (2%) Query: 197 FVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQ 254 + + ++ K + G + + P+F + + Sbjct: 11 QSESECQQIKKDITEGKITFEEAARKHSLCPSGARGGDLGTFSQGQMVPEFDRVVFNDEL 70 Query: 255 NNTTNPYVTQKGVEYIAICDK 275 N P TQ G + I + Sbjct: 71 NKVHGPVQTQFGYHLLEITSR 91 >gi|119945335|ref|YP_943015.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychromonas ingrahamii 37] gi|119863939|gb|ABM03416.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychromonas ingrahamii 37] Length = 92 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 25/75 (33%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ + + K +K+++ G + + P F + + T Sbjct: 15 KEKADEILLQLKKGAKFQILAKKYSTCPSGKKGGDLGEFKKGQMVPAFDKVAFTGEILTP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G I + Sbjct: 75 HLVKTKFGWHVIKVL 89 >gi|308063548|gb|ADO05435.1| hypothetical protein HPSAT_03485 [Helicobacter pylori Sat464] Length = 416 Score = 58.1 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 84/288 (29%), Gaps = 35/288 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 152 ANSTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 205 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 206 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 264 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + E + K+ ++ Sbjct: 265 NILLTNVDTSS-ETKMREYYNKHKEQFSIPTEIETVRYTSTNQEDLERAMSNPNLEIPGV 323 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 + + +++ Q + Q + T G Sbjct: 324 SKANEKIE--------------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQFI 363 Query: 270 ---IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I ++ K +++ + +K E+ +KLR + I Sbjct: 364 TFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 411 >gi|88801073|ref|ZP_01116621.1| peptidyl-prolyl cis-trans isomerase C [Reinekea sp. MED297] gi|88776212|gb|EAR07439.1| peptidyl-prolyl cis-trans isomerase C [Reinekea sp. MED297] Length = 94 Score = 58.1 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 23/81 (28%), Gaps = 1/81 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN- 255 ++ + + R ++++ G + F +++ K Sbjct: 14 KTREEAEKLKARLQRGEDFAKLARRYSTCPSAKKGGDLGEFRRGQMAKPFDDVVFKKAEL 73 Query: 256 NTTNPYVTQKGVEYIAICDKR 276 P T+ G I +R Sbjct: 74 EIHGPVKTRFGFHLIQTLYRR 94 >gi|224103965|ref|XP_002313264.1| predicted protein [Populus trichocarpa] gi|222849672|gb|EEE87219.1| predicted protein [Populus trichocarpa] Length = 296 Score = 58.1 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 9/92 (9%), Positives = 26/92 (28%), Gaps = 1/92 (1%) Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIA 271 + +++ G ++ + + P+F+ + N T+ G + Sbjct: 116 GEDLSDLAVEYSLCPSKEEGGMLGWVRKGQMVPEFEEAAFSAPLNKVVRCKTKFGWHLLQ 175 Query: 272 ICDKRDLGGE-IALKAYLSAQNTPTKIEKHEA 302 + +R+ L + K Sbjct: 176 VISEREESLLGEIQADELHVKIQDPTFAKEAQ 207 >gi|71278338|ref|YP_270156.1| peptidyl-prolyl cis-trans isomerase C [Colwellia psychrerythraea 34H] gi|71144078|gb|AAZ24551.1| peptidyl-prolyl cis-trans isomerase C [Colwellia psychrerythraea 34H] Length = 92 Score = 58.1 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 9/76 (11%), Positives = 20/76 (26%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 +K + + + +K + G + F +++ K Sbjct: 12 KTEKLAVELKTQLDKGANFGALAKKHSLCPSKKKGGDLGEFRRGQMVKAFDDVVFKRPLL 71 Query: 256 NTTNPYVTQKGVEYIA 271 P T+ G I Sbjct: 72 KVHGPIKTKFGYHLIK 87 >gi|225012326|ref|ZP_03702762.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteria bacterium MS024-2A] gi|225003303|gb|EEG41277.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteria bacterium MS024-2A] Length = 704 Score = 58.1 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 58/226 (25%), Gaps = 17/226 (7%) Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 T+ D+S L K + +TL+ K+ F F R Sbjct: 246 TEDDLSSIRLRLDALKEERVAYNDV--SKLTDTLEGFRSTKNIADFIDEYSEESFDSVYR 303 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 G +++ L K G+ ++ + I N Sbjct: 304 ARGEFNNEYADILFKLSKGEVFGPYRDRGDFKISRLIDRKVNASLRASHILIAFNGATRA 363 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 V + + + +R + +++ Sbjct: 364 PSEV---------------SRTKAEAKSEANRVYKMARRASSDFEALVREYSDGPTKTRG 408 Query: 232 GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 G + E D+ + N K++ T+ G + + DK D Sbjct: 409 GDLGFFREGDMAQELFNFTNKNKVGNIGLVETEFGFHIVKVTDKDD 454 >gi|120602307|ref|YP_966707.1| hypothetical protein Dvul_1261 [Desulfovibrio vulgaris DP4] gi|120562536|gb|ABM28280.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4] Length = 328 Score = 58.1 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 30/306 (9%), Positives = 87/306 (28%), Gaps = 28/306 (9%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE------LEK 74 VL + ++ A+ + T+NG + + E L Sbjct: 17 VLAVTLLLSAGGCADDALPPGVVATVNGHPVNMKLLQATHDAYAQSWTGAEGPSVEALRS 76 Query: 75 I---AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + +L+V+ L Q++ G + + + F + L + + Sbjct: 77 QYGAVLADLVVQELVLQKLAAVGASVTDAELGAA--EAEVRGDYPEGMFEAALVEDYLDL 134 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 +++ L + + + E+ + + + +R ++ Sbjct: 135 EVWREMLRRRLALTKFAQVVLRSEVAISLEEVESWYRAHQGEFRLAARVRFIM------- 187 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 V+ ++ E+ E+ +S + + + +Q L Sbjct: 188 ------VEGDTREGVEAATGAVASGAAPEEVEKAFPGMSGNEL-LIRRDRIPAAWQKALA 240 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKL 308 + P + + + + AY + + K++ +V++ Sbjct: 241 ALKPGGVSPPIAFEGRWVAFRLIESLPAQDMSVVDAYPVIERRLLEEKLDAAFDVWVERN 300 Query: 309 RSNAII 314 + A + Sbjct: 301 LAGAKV 306 >gi|317012477|gb|ADU83085.1| hypothetical protein HPLT_03295 [Helicobacter pylori Lithuania75] Length = 419 Score = 58.1 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 88/288 (30%), Gaps = 35/288 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 155 AGNTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 208 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 209 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 267 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + + NQ +++ + D Sbjct: 268 NILLTNVDTSSETKMREYYNKHKEQFSIPTEIETVRY----TSTNQEDLERAMTDPNLEI 323 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 + K K+E +++ Q + Q + T G Sbjct: 324 PGVSKANEKIE-----------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQFI 366 Query: 270 ---IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 I ++ K +++ + +K E+ +KLR + I Sbjct: 367 TFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 414 >gi|257470876|ref|ZP_05634966.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium ulcerans ATCC 49185] gi|317065078|ref|ZP_07929563.1| predicted protein [Fusobacterium ulcerans ATCC 49185] gi|313690754|gb|EFS27589.1| predicted protein [Fusobacterium ulcerans ATCC 49185] Length = 584 Score = 58.1 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 29/267 (10%), Positives = 74/267 (27%), Gaps = 16/267 (5%) Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETL-----KKQEIEKSGITFDSNTVNYFFVQHA 110 + K +KL+ ++ E + + + E + F +N + + Sbjct: 219 LDKARKNMKLENVSQEYKAYVERNEMEEDGFAVSNIEMAKRTLNNLFITNGDRDKARELS 278 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + + + ++GI + + + + + ++ +K Sbjct: 279 KEYYRAQIKLAKIAIERGITVDETLPLDYKFEEYKKGLFENIKNSLNPSDAQLKEYFEKN 338 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 K + + + + + K + L +K + + Sbjct: 339 KLVYDTFPSSDSYIAILKVDASAEDKAAAKAKAEELLKTLTPENFAEVAKKNSDGPSSPN 398 Query: 231 IGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 G + + D+ FQ + + P T G I I D++ + +A Sbjct: 399 GGDLGWFSKKDMVEPFQKAVFSGEVGKIYPQPVETIFGEHLIYIEDRK----DDEERAKA 454 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIH 315 S K+ + A I Sbjct: 455 SHILIVPKVSEATINI-----KKAEIE 476 >gi|206580185|ref|YP_002237552.1| nitrogen fixation protein NifM [Klebsiella pneumoniae 342] gi|206569243|gb|ACI11019.1| nitrogen fixation protein NifM [Klebsiella pneumoniae 342] Length = 266 Score = 58.1 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 10/163 (6%), Positives = 40/163 (24%), Gaps = 3/163 (1%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + R + +Q + + + Sbjct: 98 IASQAPRPDPATVQAWYLRHQAQFMRPEQRLTRHLLLTVDGDDQTVYSRIRELHGQIEAS 157 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 ++ + + G ++ L + L ++N + P ++ G + Sbjct: 158 REAFAPLAQRHSHCPSALDGGLLGWIGRGLLYPQLEEALFALAENALSAPVASELGWHLV 217 Query: 271 AICDKRDLGGEIALK--AYLSAQNTPTKIEKHEAEYVKKLRSN 311 R + + +H+ +++ ++ + Sbjct: 218 WCEAIRPAAPMTPEQALESARDYLSQQSQRRHQRQWLAEMLAR 260 >gi|42521061|ref|NP_966976.1| hypothetical protein WD1266 [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410802|gb|AAS14910.1| hypothetical protein WD_1266 [Wolbachia endosymbiont of Drosophila melanogaster] Length = 399 Score = 58.1 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 82/245 (33%), Gaps = 22/245 (8%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALLK-----LQKINGELEKIAVQELIVETLKKQEIE 91 A I +NGE I++ DI KRI + E + ++ELI E + E + Sbjct: 36 ATEIEIVADVNGEPISNLDIEKRINFINSLFGTQSVNQKEAKPQVLRELIDEIIIINEAQ 95 Query: 92 KSGITFDSNTVNYFFVQHARN-TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 + I + ++ + L A + +++K I ++ + Q +W +++ Sbjct: 96 RLNIKLSNEELDNAIMLFLTQSFKLKANEVDQYIEKHNIDLGILRKQIKCQLLWGKIIEV 155 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + E+ K++ + ++ D + + ++ Sbjct: 156 RIVPFINISDKEVDDVKRQTEKPDYLITFQEFIIPDQKDKDVYGIAEDLVKKLRNSDNPE 215 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 K + GK + +LE ++ P+ +G I Sbjct: 216 SPIKMRKATVNLSQL-----KGKLKSVLEG-----------LETSDIAGPFSFSEGYSVI 259 Query: 271 AICDK 275 + DK Sbjct: 260 KVIDK 264 >gi|227508896|ref|ZP_03938945.1| peptidylprolyl isomerase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191657|gb|EEI71724.1| peptidylprolyl isomerase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 295 Score = 58.1 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 34/288 (11%), Positives = 71/288 (24%), Gaps = 40/288 (13%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 ++ FV++ ++ S TING IT + + + + Sbjct: 2 IMKKGFVILAGIGAGLILSACSNQS---VATINGSNITKDAYYQEMK-------DSPSGQ 51 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A+ ++I++ + ++ G + V + G S + Sbjct: 52 QALGQMILDKGLE---KQYGNKVKNTAVTRQLNTVKKQYGASFGA-------FLTQNGLT 101 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 +++ + + + Q Sbjct: 102 ASQYKRNLKEDLLLRAAIKADTKFTPDMLKQQFK---------------HYQPKVTVNQI 146 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYL--LESDLHPQFQNLLK 251 + + +++ G+ + L P F+ Sbjct: 147 LVSKKATAQKVINQLNAGHSFAKLAAAYSTDTATKKKSGRISPFDNTNTTLDPNFKKAAF 206 Query: 252 K-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 K T P TQ G E I + + G K L Q TK Sbjct: 207 KLKTGQYTKTPVKTQYGYEVIQMVNHPAKGTYQNHKEALKNQIVDTKA 254 >gi|261839514|gb|ACX99279.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori 52] Length = 426 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 89/289 (30%), Gaps = 37/289 (12%) Query: 34 KSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + ++ +NG IT I + Q+ + + A LI E +K QE Sbjct: 162 AGSTLEDKVVGGISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQE 215 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 IE+ I D + ++ A+ G+ + F L +G ++ L ++++ Sbjct: 216 IERLKIHVDDDKLDQEMAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLR 274 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 N + + NQ +++ + + Sbjct: 275 NILLTNVDTSSETKMREYYNKHKEQFSIPTEIETVRY----TSTNQEDLERAMSNPNLEV 330 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG--- 266 + K K + L+PQ + + + P + G Sbjct: 331 PGVSKANEK------------------IEMKTLNPQIAQVFISHEQGSFTPIMNGGGGQF 372 Query: 267 -VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 YI ++ K +++ + +K E+ +KLR + I Sbjct: 373 ITFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 421 >gi|270290459|ref|ZP_06196684.1| foldase prsA [Pediococcus acidilactici 7_4] gi|304384659|ref|ZP_07367005.1| peptidyl-prolyl cis-trans isomerase [Pediococcus acidilactici DSM 20284] gi|270281240|gb|EFA27073.1| foldase prsA [Pediococcus acidilactici 7_4] gi|304328853|gb|EFL96073.1| peptidyl-prolyl cis-trans isomerase [Pediococcus acidilactici DSM 20284] Length = 300 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 36/310 (11%), Positives = 79/310 (25%), Gaps = 45/310 (14%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K + F I + T +G IT + + Sbjct: 3 LMKKVLLGFASIAMAFTLAACGS------KTVATTSGGKITQDEYYSSLKDTSN------ 50 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 K +QE+IV + +++ + + + + S + Sbjct: 51 -GKQVLQEMIVNKVLEKQYGDKVTKKVVD----------KQYNAYKDQYGSSFKDILASN 99 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + L Q ++K ++ + + Sbjct: 100 GMTEASLRKQIRSNALLKEAVKDNDKISSSDLKKEWKSYQPK---------------VTV 144 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYL--LESDLHPQFQN 248 Q + +D + +K+++ + GK + L F++ Sbjct: 145 AQILVSKKSTAEDVIKQLNDGKDFAKLAKKYSTDSSSKNKGGKIAPFDDTNTTLDSDFKD 204 Query: 249 LLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH--EAEY 304 K TT P TQ G + I + DK G L + + + Sbjct: 205 AAFKLDEGKYTTKPVKTQYGYQVIKMLDKPAKGKMSDHTKELKERIWNKDMSDAPTLRKV 264 Query: 305 VKKLRSNAII 314 + K+ + Sbjct: 265 ITKVLKKGNV 274 >gi|213586381|ref|ZP_03368207.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 102 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 9/102 (8%), Positives = 29/102 (28%), Gaps = 5/102 (4%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNN 256 Q++ + E +++ + G+ + +L F + + Sbjct: 1 AQRQAESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGD 60 Query: 257 TTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTP 294 P + G + + D R + ++ + + Sbjct: 61 IVGPIRSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSA 102 >gi|58584292|ref|YP_197865.1| parvulin-like peptidyl-prolyl isomerase, SurA [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418608|gb|AAW70623.1| Parvulin-like peptidyl-prolyl isomerase, SurA [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 384 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 79/245 (32%), Gaps = 19/245 (7%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALL-----KLQKINGELEKIAVQELIVETLKKQEIE 91 A+ I +NGE I++ DI KRI L EL+ +++LI E + E + Sbjct: 18 AVEIEIIADVNGEPISNLDIEKRINLTHSLFGTQSIDKNELKLQILKQLIDEIIIINEAQ 77 Query: 92 KSGITFDSNTVNYFFVQHARN-TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 + I ++ V L + + + IG N K+ + Q +W +++ Sbjct: 78 RLNIKLSDEELSNAVVLFLTQSFKLKDNEVDQYAKEHNIGLNILKRQIECQLLWDKIIEV 137 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + E+ N K + + G + ++ + Sbjct: 138 RIVPFINISDKEV--NNAKGQIEKPDYLITFQEFIIPNQKDADVYGIAEDLVEKLRNNNN 195 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 + + + + G + +LE + P + + + Sbjct: 196 DFIPEAPIKMRKVTVNLNQLKGNLKSILEG-----------LKTGDIAGPVSSSEDYSIV 244 Query: 271 AICDK 275 + DK Sbjct: 245 KVIDK 249 >gi|77362220|ref|YP_341794.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Pseudoalteromonas haloplanktis TAC125] gi|76877131|emb|CAI89348.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Pseudoalteromonas haloplanktis TAC125] Length = 92 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 23/75 (30%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 ++ +D + K +K++S G + PQF + Sbjct: 15 KEIAEDIITQLGKGAKFQTLAKKYSSCPSGKKGGDLGEFRRGQMVPQFDKIAFNGAILEP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G I + Sbjct: 75 HLVKTKFGWHVIKVL 89 >gi|270264226|ref|ZP_06192493.1| hypothetical protein SOD_g01590 [Serratia odorifera 4Rx13] gi|270041875|gb|EFA14972.1| hypothetical protein SOD_g01590 [Serratia odorifera 4Rx13] Length = 93 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 21/76 (27%), Gaps = 1/76 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +K D R K++S + G + + F + + Sbjct: 15 EKLANDLLAKLKRGVSFDTLARKYSSCPSKRNGGALGEFNKGTMVAAFDKAVFSIPLLKP 74 Query: 258 TNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 75 YGPVKTQFGYHIIKVL 90 >gi|261406730|ref|YP_003242971.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. Y412MC10] gi|261283193|gb|ACX65164.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. Y412MC10] Length = 363 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 34/349 (9%), Positives = 103/349 (29%), Gaps = 36/349 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K F SL +++ ++ ++ T++G I + + I Sbjct: 4 MVHK-FCSLKWLFIAGFFILIVVTILLIAKPAFTQTHHEDAYIATVDGVEIHVSEFQRAI 62 Query: 61 ALLKL--------------------------QKINGELEKIAVQELIVET--LKKQEIEK 92 + + ++K A+++ I + + ++ Sbjct: 63 DANRAGIIKYFHEKYDAAPSAAFWTTPYGGNEIPLELIKKKALEDSINQKIRQILAKEQE 122 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS---IWPDVVK 149 F + + ++ + + +Y+ + + +++ Sbjct: 123 VLPDISYAGFIQNFNLENQRRQQAIKNHQVIFGPAQYTEEAYYEYMMANTALSVKNHLME 182 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 +D+ L ANK+++ + + + L + N+ + + + E++R Sbjct: 183 HDWKPSEQQLITFYEANKRRLYHAPATVKVRQLSLSFLDANRNVDTLLKTQVKRKIEKAR 242 Query: 210 LRLPKDCNKLEKFASKIHDVSIGK----AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 ++ + + D + + + P Q + Sbjct: 243 EKISSGISFEQAVKDIKQDDRVTEEVYNLDSYRHNVRSPVAQASADLLPGEVSEIIEENG 302 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + +K LG + + Q I+ +YV++ ++A + Sbjct: 303 RFYLMQCMEKDQLGSKYLAFDGIREQVLKDYIDNQYEQYVRERLTDAKV 351 >gi|295700334|ref|YP_003608227.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1002] gi|295439547|gb|ADG18716.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1002] Length = 250 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 32/270 (11%), Positives = 68/270 (25%), Gaps = 26/270 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 I+ EV+ D+ + I LLKL + LI + ++ + + Sbjct: 4 IVRIDDEVV---DVDEFIRLLKLTGQ--------FESLIEQIVRDKLTVHAAKKQGVTVS 52 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 Q A + + H I + + + + Sbjct: 53 ADEIQQRADQFRRVRGLHRAADMNHYLDALHVSLDEFEVFITDGLYQEKMLDDI-GNDAA 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + VL S K + + + Sbjct: 112 IRDYFALNSPKFDAIEVSHIVLDSEG-----------KAKEMISYLHDDPDAFADMAREH 160 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKG--VEYIAICDKRDLG 279 + S G +L L P + + + + P+ + E A+ K Sbjct: 161 SIADTRESGGVIGKVLRGSLKPDIEAKIFNAAVGDLLGPFPSADRSCFEIFAVTAKYPAT 220 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + + + + E+V + R Sbjct: 221 LDADVATEIRRLLRESWLIARAQEHVIEAR 250 >gi|322420018|ref|YP_004199241.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18] gi|320126405|gb|ADW13965.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18] Length = 93 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 17/80 (21%), Gaps = 1/80 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 ++ + + G + +F + + Sbjct: 12 ATEEACIALKSQIEAGADFAEVARANSLCPSGNQGGLLGEFGPGQMVREFDEVVFSGEVG 71 Query: 256 NTTNPYVTQKGVEYIAICDK 275 P TQ G I I + Sbjct: 72 KVLGPVKTQFGYHLIEITSR 91 >gi|170749508|ref|YP_001755768.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium radiotolerans JCM 2831] gi|170656030|gb|ACB25085.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium radiotolerans JCM 2831] Length = 633 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 36/402 (8%), Positives = 94/402 (23%), Gaps = 89/402 (22%) Query: 1 MTSKVFTSLSDFI-KLLTTYFVLIIFCIVPIVSYKSW--AMSSRIRTTINGEVITDGDIS 57 M + + ++ K++ T ++ V I + + +S T+ IT + Sbjct: 1 MLQGIRNASQHWLGKIVLTIIFTLLIAGVGIFGVEEFFRGGASNKVATVGSTPITAEQVR 60 Query: 58 KRIALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L++ + +LI E Q+ G+ +V Sbjct: 61 QAYQNQLQRYQTQLKRPLTPDQARMLGLDRQVMSQLITEAALDQKTHDLGLAVPDASVIK 120 Query: 105 FFVQHA--RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK------- 155 + +N E + Q G N +S+ + + + Sbjct: 121 AIHEEKSFQNQQGQFEPQLFYQTLQRAGLNEGLFVREQRSVIARLQLAEAVSSDLHVPLA 180 Query: 156 ----------------------------YGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + E+ + K+ L + Sbjct: 181 MREAVHRYTTERRAAAYLMLTPSVAGQIPDPTDDELKTWYEANKSGFRAPEFRSVNLLVV 240 Query: 188 PDNKLQNQGF------------------------VQKRIKDAEESRLRLPKDCNKLEKFA 223 + +Q+ + + K K Sbjct: 241 EPEAMAKPDAITEADARAAYALNKDRYGTPEKRTIQQIVFPDAAAAEAARKAITDGSKTF 300 Query: 224 SKIHDVSIGK-----AQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 + L +S+L + + P + G + + Sbjct: 301 DAVAAERGTDEKDLTLGTLTKSELFDKAVADAAFALPEGGVSQPVQGRFGTVLLRVTKIE 360 Query: 277 --DLGGEIALKAYLSAQNTPTKIE---KHEAEYVKKLRSNAI 313 + A++ + + + + ++ R+ A Sbjct: 361 AGTVKPFEAVEGEIRKALALARARDAMETTRDAIEDQRAGAK 402 >gi|332995558|gb|AEF05613.1| peptidyl-prolyl cis-trans isomerase C [Alteromonas sp. SN2] Length = 92 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 9/76 (11%), Positives = 21/76 (27%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN- 255 +K E + ++ ++ G + F +++ K + Sbjct: 12 KTEKEAFAILEQLKKGKDFSTLAKRHSTCPSGKKGGDLGEFRRGQMVKAFDDVVFKKEVL 71 Query: 256 NTTNPYVTQKGVEYIA 271 P T+ G I Sbjct: 72 KVHGPVKTRFGYHLIK 87 >gi|325285709|ref|YP_004261499.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cellulophaga lytica DSM 7489] gi|324321163|gb|ADY28628.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cellulophaga lytica DSM 7489] Length = 700 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 34/104 (32%), Gaps = 1/104 (0%) Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + + +KR ++ + + + + G Y + + P+F Sbjct: 361 NPEVKRTKEEAKKRAEELLKDAKKGDVEFSVLARDNSDGPSASRGGDLGYSQQGRMTPKF 420 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 + + T T+ G + I DK+DL L + A Sbjct: 421 DEFMFSNNVGTIGMVETEFGFHIVKIDDKQDLVRVATLARAIEA 464 Score = 44.3 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 31/381 (8%), Positives = 89/381 (23%), Gaps = 68/381 (17%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + + + I ++ + + S + ING+ I+ + + Sbjct: 3 ILENIRKRTTVLILIIGLALFAFVISGIFSADGMSGVKTGTTVAEINGKDISIDKFRREV 62 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + G V + + +K + + + + +++ Sbjct: 63 EAASNRFGAGATSMQVVNSVWDQEVKNAILSDEFDDLGISIEQDQIINFIASNPGFSQNP 122 Query: 121 SSFLD--------------------KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + ++ +Q+ N G Sbjct: 123 QYQNENGVFDEYIFKEFISTLKTENPAQYALWLQQEQAIMQAAKEQTYFNLVKAGLGATL 182 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E + + + +Y+ + ++ + IKD EE + + Sbjct: 183 KEGELDYKLANDKIDIKYVRVPYTSIADSSVAVSKDEIAAYIKDHEEDFKQEKARDFQFV 242 Query: 221 KFASKIH-------------------DVSIGKAQYLLESDL------------------- 242 F K + + + ++ Sbjct: 243 YFEEKPSLEDEKAVEAKVVSLLNDKVEYNDTILGFRNTKNIEEFLDRNSDLKYDTIYKTK 302 Query: 243 ----HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL------SAQN 292 L+ + + PY + + DK+ G A + A Sbjct: 303 NVLSPKFADTLMALNIGDIYGPYRDGNYFKVTKMMDKKKDGNVKASHILVAWEGAERANP 362 Query: 293 TPTKIEKHEAEYVKKLRSNAI 313 + ++ + ++L +A Sbjct: 363 EVKRTKEEAKKRAEELLKDAK 383 >gi|296235752|ref|XP_002763032.1| PREDICTED: hypothetical protein LOC100394726 [Callithrix jacchus] Length = 235 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 11/87 (12%), Positives = 24/87 (27%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------L 249 +I +A E + +++ G ++ + FQ Sbjct: 150 EKHSKIMEAMEKLKSGMRFNEVAAQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVS 208 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 209 GMDKPVFTDPPVKTKFGYHIIMVEGRK 235 >gi|326315452|ref|YP_004233124.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372288|gb|ADX44557.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 303 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 17/178 (9%), Positives = 49/178 (27%), Gaps = 11/178 (6%) Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 ++ + + ++ + R V + VQ+ + A Sbjct: 110 QAIEALLEQAIAVPDPLEESCRRHYEAHAARYRDGERVHLRHILYAVTPGVDVQRLRERA 169 Query: 206 EESRLR-------LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNN 256 E + L+ + ++ G +L D P+F + + Sbjct: 170 EATLLQLRCADDGGEAFARAARESSNCPTGAEGGDLGWLARGDCAPEFAREVFGAQEVGV 229 Query: 257 TTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 ++ G+ + + + G ++ ++ +Y++ L A Sbjct: 230 LPRLVHSRFGLHVVEVVARDAGRQRGYGEVREAVALALRQQAWVNALRQYLQVLAGEA 287 >gi|114563785|ref|YP_751298.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella frigidimarina NCIMB 400] gi|114335078|gb|ABI72460.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella frigidimarina NCIMB 400] Length = 92 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 9/79 (11%), Positives = 27/79 (34%), Gaps = 1/79 (1%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257 Q++ + ++ + + +S G+ + +F +++ + N Sbjct: 13 TQEQCESLKQQIEAGADFADVAKANSSCPSGAQGGELGSFGPGMMVKEFDDVVFSAPLNV 72 Query: 258 T-NPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 73 VQGPVKTQFGFHLLEVTSR 91 >gi|299536706|ref|ZP_07050016.1| hypothetical protein BFZC1_11817 [Lysinibacillus fusiformis ZC1] gi|298727820|gb|EFI68385.1| hypothetical protein BFZC1_11817 [Lysinibacillus fusiformis ZC1] Length = 323 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 81/303 (26%), Gaps = 36/303 (11%) Query: 6 FTSLSDFIKLLTTYFV--LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63 + ++ + ++ F I + S I+G+VIT + + Sbjct: 24 RLKTKPALAVIAVLLLGNVLWFISWLIPNKGQEIGSDEQVAAIDGDVITRQEWMIAM--- 80 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 K +Q L+ ET+ ++ + I ++ Sbjct: 81 -----EERYGKETLQNLVNETVMEKAAKTYKIKVTDKEIDLELALMRS------AQDKFD 129 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 Q + +Q + Q I V+ D +++ N+E N+ T V Sbjct: 130 TAMQNLSAEQLRQKIRSQLILDKVLTKDVVIEEENVEKYYEENQGLYNTKTSYRTNFIEV 189 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESD- 241 +K +A + + G +L E+ Sbjct: 190 -------------DSKKAADEALGELKNGSDFTVLAREISVDSASASLGGDIGFLTENQE 236 Query: 242 --LHPQFQNLLKKSQNNTTNPYVTQKGVE-YIAICDKRDLGGE--IALKAYLSAQNTPTK 296 + N + + G + + + + +K ++ + + Sbjct: 237 NVDPAIINTVKSLKANEVSKAFKLDNGHYGIVQVQEVLEGQSFTYDDVKEHIERELALEQ 296 Query: 297 IEK 299 + + Sbjct: 297 LPQ 299 >gi|242243062|ref|ZP_04797507.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus epidermidis W23144] gi|242233520|gb|EES35832.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus epidermidis W23144] Length = 322 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 90/309 (29%), Gaps = 30/309 (9%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 + + + S + + + + ++ G+V ++ + + ++I Sbjct: 1 MNKIIVPVTASALLLGACGSNATESKDNTLISSKAGDV----KVADVMKKMGKEQIANTS 56 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 I + +++ + K D+ ++ + + G + S + Sbjct: 57 FSIVLNKILADKYK--------DKVDTKDIDKDIKKEEKQYGGKDQFESMLKQQ-----G 103 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 Q K + K + EI + LI+ S L Sbjct: 104 MSLDDYKEQKKLSAYQKQLLLDKVNVSDKEIK-----ENSKKASHILIKVKSKSSDKEGL 158 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-L 250 ++ +K K +E K +K + G Y+++ + F+ Sbjct: 159 SDKKAKEKAEKIQKEVEKNPNKFGEIAKKESMDSSSAKKDGSLGYVIKGQMVDSFEKALF 218 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH---EAEYVKK 307 K + + T G I + K+ + + K++K + K+ Sbjct: 219 KLKEGEVSKVVKTDYGYHIIKAD---KETDFNSEKSNIKQKLIEEKVQKKPKLLTDAYKE 275 Query: 308 LRSNAIIHY 316 L + Y Sbjct: 276 LLKEYKVDY 284 >gi|198283164|ref|YP_002219485.1| hypothetical protein Lferr_1036 [Acidithiobacillus ferrooxidans ATCC 53993] gi|198247685|gb|ACH83278.1| hypothetical protein Lferr_1036 [Acidithiobacillus ferrooxidans ATCC 53993] Length = 522 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 24/229 (10%), Positives = 59/229 (25%), Gaps = 14/229 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKR 59 M ++ + + F + + Y +S + T++G+ I+D KR Sbjct: 1 MMETFRNFGRSWVAKSLMVLIALSFVLWGVSGYLFSGHSTSSVVATVDGQKISDAAFQKR 60 Query: 60 IALLKLQKI-------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 + + + + LI L E + G+ + Sbjct: 61 MKDALARYSHIFGATTAAKMAADRSFGLEVLNGLIDNMLLGMEAGRLGLQVPDAALAKKI 120 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 A + + Q+ + + + + + ++ A Sbjct: 121 ESIPAFQEKGAFSKNLYQKLLAANGMTPAQFEDMLRESMRLEQLQVVPQVIATASKVEAT 180 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + + R+ + S + A + RLP Sbjct: 181 RIWAWSQEYRDVSTVDIRDSDFAAAARPTATQVADYYHAHMDQFRLPAQ 229 Score = 41.2 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 18/59 (30%), Gaps = 3/59 (5%) Query: 261 YVTQKGVEYIAICDKRD---LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 T G + A+ + A + A + Y+K LR +A + Sbjct: 454 VKTSSGYQIFAVTRVTAPAAAAINPKVTAQIRASLEEQRGRLLSTAYLKDLREHARVKI 512 >gi|148653021|ref|YP_001280114.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter sp. PRwf-1] gi|148572105|gb|ABQ94164.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter sp. PRwf-1] Length = 92 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 7/77 (9%), Positives = 21/77 (27%), Gaps = 4/77 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 ++ ++ + +K ++ G + + P F + Sbjct: 15 KELAEEIIAKLNKGAHFDVLAKKHSTCPSGKKGGDLGEFRKGQMVPAFDKV--CFNGELL 72 Query: 259 NP--YVTQKGVEYIAIC 273 P T+ G + + Sbjct: 73 TPHLVKTKFGWHVVKVL 89 >gi|324513446|gb|ADY45525.1| Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Ascaris suum] Length = 125 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 27/87 (31%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q + +A E K ++ S G ++ + FQ+ + Sbjct: 40 EKQSKALEAMEKLKSGMKFNEVAANYSED-KARSGGDLGWMTRGSMVGAFQDAAFALPTS 98 Query: 257 TTN-------PYVTQKGVEYIAICDKR 276 T + P TQ G I + K+ Sbjct: 99 TVDKPVYTDPPVKTQFGYHIIMVEGKK 125 >gi|258622473|ref|ZP_05717495.1| peptidyl-prolyl cis-trans isomerase C [Vibrio mimicus VM573] gi|258625154|ref|ZP_05720070.1| peptidyl-prolyl cis-trans isomerase C [Vibrio mimicus VM603] gi|261212993|ref|ZP_05927277.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio sp. RC341] gi|262164493|ref|ZP_06032231.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio mimicus VM223] gi|262173338|ref|ZP_06041015.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio mimicus MB-451] gi|258582529|gb|EEW07362.1| peptidyl-prolyl cis-trans isomerase C [Vibrio mimicus VM603] gi|258585173|gb|EEW09900.1| peptidyl-prolyl cis-trans isomerase C [Vibrio mimicus VM573] gi|260838058|gb|EEX64735.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio sp. RC341] gi|261890696|gb|EEY36683.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio mimicus MB-451] gi|262026873|gb|EEY45540.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio mimicus VM223] Length = 92 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 22/77 (28%), Gaps = 4/77 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ D + K +K++ G + + P F Q Sbjct: 15 KEQADDILAQLKKGAKFHVLAKKYSLCPSGKKGGDLGEFRQGQMVPAFDKA--CFQGEVL 72 Query: 259 NP--YVTQKGVEYIAIC 273 P T+ G + + Sbjct: 73 TPQLVKTKFGWHVVKVL 89 >gi|329925505|ref|ZP_08280379.1| PPIC-type PPIASE domain protein [Paenibacillus sp. HGF5] gi|328939788|gb|EGG36128.1| PPIC-type PPIASE domain protein [Paenibacillus sp. HGF5] Length = 311 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 28/295 (9%), Positives = 79/295 (26%), Gaps = 30/295 (10%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 + W S+ +I IT+ + + + + ++ Sbjct: 32 FSQEASPPWKAGSQPVASIQDRAITEDEWVDELK--------KRYGREMLMTMLNRHAVA 83 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E + GI + V +R+ G FL + + L ++ + + Sbjct: 84 LEAKAKGIDVTAAEVETEIEVMSRSYG----SKERFLSEMEDQLGITESELKTETTYRLL 139 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 ++ E +I + ++ + + + + + + + Sbjct: 140 LEKIATSDVHIEEQQIDSYLEQYPDQFRPKKQLNLSMIEVASEDEAERVM---------D 190 Query: 208 SRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDL---HPQFQNLLKKSQNNTTNPYVT 263 + + + + G+ + E D + L + P Sbjct: 191 RLENGEDFADLAAQVSLDEYTREDGGQIGLVEEDDPFLPPELLEAALSLEPGDIAGPVSL 250 Query: 264 QKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN--AII 314 + + D + E +++ + Q + ++LR A I Sbjct: 251 TDTYAIVYVKDIIEPQAPSEESIRKAVRKQLALEQSVSLSE-LERQLREKYEARI 304 >gi|255533907|ref|YP_003094279.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pedobacter heparinus DSM 2366] gi|255346891|gb|ACU06217.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pedobacter heparinus DSM 2366] Length = 698 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 40/121 (33%), Gaps = 6/121 (4%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 +K + ++++ G+ + P F++ + Sbjct: 362 DKAKKLADSLKTLVQNGASFAALAKQYSIDGSKDKGGELGTFSRGQMVPVFEDAAFNGKA 421 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN--TPTKIEKHEAE---YVKKLRS 310 +Q GV I I +K+ ++A AY+ + + + ++ +++S Sbjct: 422 GDLKVVTSQFGVHLIKI-EKQIGSSKVAKLAYIEKGLASSNKTRDAAYKKASAFLNEVKS 480 Query: 311 N 311 N Sbjct: 481 N 481 Score = 35.8 bits (80), Expect = 8.3, Method: Composition-based stats. Identities = 21/255 (8%), Positives = 58/255 (22%), Gaps = 17/255 (6%) Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 + + + L + K ++EK + + N ++ Sbjct: 130 VQYFGNPQTGEVNRAEVLASLKQQD-KNPQLEKQWELLQNEIEKQALQKKYANLISNSIY 188 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 ++ + + + V E + + K Sbjct: 189 VTTLEANDDYQNRNKLASFKYTLLDYAAV---PDATVKPTESDYSDYYNENKKRFENPSE 245 Query: 180 IRTVLFS-IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK----IHDVSIGKA 234 R+ + + + K D + R + + S +S GK Sbjct: 246 TRSFEYVAFSVSPTKEDSAAVKTQVDKLAADFRTAANDSLFAAVNSDVKVPYAYMSKGKL 305 Query: 235 QYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 + + P + + I + D R + +++ + Sbjct: 306 D-------PAVDSVVFNLPAGSYYGPRFSGNSYKLIKVIDTR-FSPDSVKASHILLDPSK 357 Query: 295 TKIEKHEAEYVKKLR 309 + L+ Sbjct: 358 MGGADKAKKLADSLK 372 >gi|163755251|ref|ZP_02162371.1| possible peptidyl-prolyl cis-trans isomerase [Kordia algicida OT-1] gi|161324671|gb|EDP96000.1| possible peptidyl-prolyl cis-trans isomerase [Kordia algicida OT-1] Length = 660 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 79/306 (25%), Gaps = 46/306 (15%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + L + +V ++ + ++ TI GE + S+ + ++ Sbjct: 1 MKNSIQLFLILLVSFTTF-GQSKKDKVLFTIEGEPTYVSEFSRVYKKNLDIIDEKDQKE- 58 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 I E K E S + G + Sbjct: 59 -----IEEYFDLFVEYK-------------LKLKEAKNLKLDEKDSYVKELAGYRKQLSR 100 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 Y+ + + K + + ++ D ++ Sbjct: 101 NYMTDNNATEKLTKEAYDR------------------LQKEVKASHILINVSLDAAPKDT 142 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-------SIGKAQYLLESDLHPQFQN 248 +I D +S L K + + G Y + F++ Sbjct: 143 LAAYNKIMDIRKSILEGADFGEMAVKHSDDPSAKGNQKVAANKGNLGYFSAFRMVYPFES 202 Query: 249 -LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + P TQ G + + D RD GEI + L + ++ + +K Sbjct: 203 AAFNTQKGEVSMPVRTQFGYHIVKVEDIRDNAGEITVAHILLLDKKEGENKEDPEQKIKD 262 Query: 308 LRSNAI 313 + S Sbjct: 263 IYSQIQ 268 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 41/138 (29%), Gaps = 5/138 (3%) Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESD 241 + + + +N+ +++IKD ++F+ V+ G Sbjct: 241 HILLLDKKEGENKEDPEQKIKDIYSQIQDGGDFGALAKRFSEDRSSGVNKGILPKFGRGR 300 Query: 242 LHPQFQNLLKK---SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 L + + + P+ ++ G + + K + K L + K Sbjct: 301 LRSKIFEDVAFSLDKAKEISKPFKSEFGWHIVQLISKHPMKSYEEEKPLLERKIKNDKRA 360 Query: 299 KHEA-EYVKKLRSNAIIH 315 +KK+ I Sbjct: 361 NVINTSILKKINQLYKIE 378 >gi|302783795|ref|XP_002973670.1| hypothetical protein SELMODRAFT_99510 [Selaginella moellendorffii] gi|300158708|gb|EFJ25330.1| hypothetical protein SELMODRAFT_99510 [Selaginella moellendorffii] Length = 253 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 12/119 (10%), Positives = 42/119 (35%), Gaps = 2/119 (1%) Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 + +Q + + + + + + G ++ + + P+F+ + Sbjct: 55 KEDQLQLLTELQKRLVQEDIDLSDLATEHSICPSKKNGGMLGWVSKGRMVPEFEEAAFSA 114 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSAQNTPTKIEKHEAEY-VKKLRS 310 N T+ G + + +R G + ++ L+ + + ++ V++L+ Sbjct: 115 PLNKIVRAKTKFGWHLLQVLSERFSGFLVEIQPEELAKRMKDPEFRENAQLLDVRELKE 173 >gi|229366844|gb|ACQ58402.1| Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Anoplopoma fimbria] Length = 127 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 + +A E + +++ G ++ + FQ+ Sbjct: 46 KCMEAMEKLKAGVRFSEVASQYSED-KARQGGDLGWMTRGSMVGPFQDAAFALPISSMDK 104 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 105 PVYTDPPVKTKFGYHIIMVEGKK 127 >gi|326492403|dbj|BAK01985.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326502962|dbj|BAJ99109.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 302 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 11/92 (11%), Positives = 30/92 (32%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 + + D E+S + + + + G ++ + P+F+ + Sbjct: 106 EKDARLLVDLEKSIASGADLSDLAVEHSLCPSKENGGMLGWVRRGQMVPEFEEAAFSAPL 165 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 N T+ G + + +RD ++ Sbjct: 166 NKVVRCKTKFGWHLVQVLSERDQCLLQDIQPE 197 >gi|109947398|ref|YP_664626.1| hypothetical protein Hac_0844 [Helicobacter acinonychis str. Sheeba] gi|109714619|emb|CAJ99627.1| conserved hypothetical protein [Helicobacter acinonychis str. Sheeba] Length = 404 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 90/298 (30%), Gaps = 37/298 (12%) Query: 25 FCIVPIVSYKSWAMSSRIR----TTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + + + ++ +NG IT I + Q+ + A L Sbjct: 131 AIFGNSNNSSNKTLEDKVVGGISLLVNGSPITLYQIQEE------QEKFKVSKNQARDRL 184 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I + +K QEIE+ I D + ++ A+ G+ + F + + ++ L Sbjct: 185 IADRIKNQEIERLKIHIDDDRLDQEMAMMAQQQGMDLDHFKQMIMAE-GHYKTYRDQLKE 243 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 ++++N + + + +Q +++ Sbjct: 244 HLEMQELLRNILLTNVDTSSETKMREYYNKHKEQFSIPMEVETVRY----SSTSQEDLER 299 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260 + D + K + L+PQ + + ++ P Sbjct: 300 AMSDPNLEVPGVNKANET------------------IEMKTLNPQIAQVFISHEKDSFTP 341 Query: 261 YVTQKG----VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + G YI ++ K +++ + +K E+ +KLR + I Sbjct: 342 IMNGGGGQFITFYIKEKKGKNEVSFSQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 399 >gi|317504768|ref|ZP_07962727.1| conserved hypothetical protein [Prevotella salivae DSM 15606] gi|315664099|gb|EFV03807.1| conserved hypothetical protein [Prevotella salivae DSM 15606] Length = 470 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 77/289 (26%), Gaps = 36/289 (12%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 I ++ S + TING+ + K Q NG K Sbjct: 2 ISLAMLLCGSMAFGQTDDPVLMTINGKPVKRSAFEFAYK--KYQTANGFERKSVGD---- 55 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + N L E+ S Q Sbjct: 56 -----------------------YAEQYANDKLKVEEALSQRLDTLPSFLQLFAAYRNQQ 92 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL-FSIPDNKLQNQGFVQKR 201 I + + + A Q+ + + +R +L Q + V++R Sbjct: 93 IPQTLDN---DAETEVEARRLYAFTQQRVDASGGMIKVREILLRLGQRASKQTEIEVKQR 149 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGK-AQYLLESD-LHPQFQNLLKKSQNNTTN 259 I + +++ ++G+ +LL L + + Sbjct: 150 IDSIYNALQHGADFGEMARRYSDNKTATNLGEHQPWLLPGQTLPEFETQAYALKKGEMST 209 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKK 307 P++T G I I DK +++ L + K A +++ Sbjct: 210 PFLTPAGYHIILIEDKSAYFPYDSVRNDLLRFVSQRNLRNKLTAARLQE 258 >gi|298480173|ref|ZP_06998371.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D22] gi|298273454|gb|EFI15017.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D22] Length = 515 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 17/290 (5%), Positives = 69/290 (23%), Gaps = 38/290 (13%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 ++ + + +A + +NG + + + Sbjct: 6 LLLGCISLFVVAVFAQEDPVLMRVNGREVLRSEFENAYRRYAERSNAQ------------ 53 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + L E + + + Sbjct: 54 ------------------LSPKEYAALFVQSKLKVEAARAAGLDTTTVFRKQHEKRRTEL 95 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + ++ M + + K + + V + R + + + + Sbjct: 96 VESYLIDKQVMDSCARVLYQKMGLKARSGRVQVMQIFKRLPQTVTFRHLEEEKVRMDSIY 155 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262 + + ++ + + ++ + P+ Sbjct: 156 RVIQNQPDLNFNRLVEIYSDDKQSRWIEG-------LETTSEFEDVAFSLAKGAVSQPFF 208 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK-IEKHEAEYVKKLRSN 311 T +G+ + + D+ + + L + + ++K A + +L+ + Sbjct: 209 TPEGIHILKVIDREEAFAYENVSGRLIERLRRKEILDKGTAAMLDRLKRS 258 >gi|302783100|ref|XP_002973323.1| hypothetical protein SELMODRAFT_232038 [Selaginella moellendorffii] gi|302789630|ref|XP_002976583.1| hypothetical protein SELMODRAFT_105619 [Selaginella moellendorffii] gi|300155621|gb|EFJ22252.1| hypothetical protein SELMODRAFT_105619 [Selaginella moellendorffii] gi|300159076|gb|EFJ25697.1| hypothetical protein SELMODRAFT_232038 [Selaginella moellendorffii] Length = 123 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 8/76 (10%), Positives = 17/76 (22%), Gaps = 1/76 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 V K +E K + + + G + + F+ Sbjct: 44 QAVAKLEHIRDEILSGRAKFSDLATQLSDCSSAKRGGDLGWFGRGQMQKSFEEATYSLKV 103 Query: 255 NNTTNPYVTQKGVEYI 270 + + G I Sbjct: 104 GELSGIVDSDSGAHII 119 >gi|224098208|ref|XP_002194667.1| PREDICTED: putative peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 variant 1 [Taeniopygia guttata] Length = 137 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 23/83 (27%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 R +A E + +++ G ++ + FQ Sbjct: 56 RAMEAMEKLKSGQRFSEVAAQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSSMDK 114 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 115 PVYTDPPVKTKFGYHIIMVEGRK 137 >gi|254782280|sp|B5KFL3|PIN4_TAEGU RecName: Full=Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4; AltName: Full=Parvulin-14; Short=Par14; AltName: Full=Peptidyl-prolyl cis-trans isomerase Pin4; Short=PPIase Pin4; AltName: Full=Rotamase Pin4 gi|197129863|gb|ACH46361.1| putative peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 variant 1 [Taeniopygia guttata] Length = 128 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 23/83 (27%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 R +A E + +++ G ++ + FQ Sbjct: 47 RAMEAMEKLKSGQRFSEVAAQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSSMDK 105 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 106 PVYTDPPVKTKFGYHIIMVEGRK 128 >gi|190347260|gb|EDK39502.2| hypothetical protein PGUG_03600 [Meyerozyma guilliermondii ATCC 6260] Length = 175 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 14/162 (8%), Positives = 38/162 (23%), Gaps = 5/162 (3%) Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 T + + + + + F + +I + + Sbjct: 15 SRTHNKEYFLNQATRESSWEPPFGTDKSKLDAYISQYKERGFKP-VVPSDGKIRTSHFLV 73 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 K+ R I + + +K ++ K E + Sbjct: 74 KHKDSRRPRSWKSPDGISLTRDEAIAIAKK---YRQQIVNGDKKLSELAEHESDCSSHSQ 130 Query: 231 IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIA 271 G + + + P F+ ++ + G+ I Sbjct: 131 GGDLGFFGKGQMQPSFEEAAFGLHVGEISDLVESDSGIHIIQ 172 >gi|326795759|ref|YP_004313579.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinomonas mediterranea MMB-1] gi|326546523|gb|ADZ91743.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinomonas mediterranea MMB-1] Length = 92 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 10/78 (12%), Positives = 21/78 (26%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 + + +E + +K + G + ++ F + K Sbjct: 12 KSKAEAEQLKERLDKGEDFHKLAKKHSLCPSGKRGGDLGEFRKGEMVSAFDRAAFKGPLL 71 Query: 256 NTTNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 72 AVQGPVKTQFGFHLIKVL 89 >gi|293369502|ref|ZP_06616081.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] gi|292635387|gb|EFF53900.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] Length = 515 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 20/290 (6%), Positives = 71/290 (24%), Gaps = 40/290 (13%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 ++ + + +A + +NG I + Sbjct: 6 LLLGCISLFVVAVFAQEDPVLMRVNGREILRSEFE------------------------- 40 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + ++ + + + L E + ++ + Sbjct: 41 -----YAYRRYAERSNARLSSKEYAALFAQSKLKVEAARAAGLDTTSAFRKQQEKCRTEL 95 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + ++ ++ + + +P +K Sbjct: 96 VESYLLDRQV-----MDSCARAIYQKMGLKARSGRVQVMQIFKRLPQTITSRHLEEEKTR 150 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL-ESDLHPQFQNLLKKSQNNTTNPY 261 D+ ++ D N D ++ ++ + P+ Sbjct: 151 MDSIYQAIQNQPDLNFNRLVEIYSDDKQSR---WIECLETTSEFENVAFSLAKGMASQPF 207 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK-IEKHEAEYVKKLRS 310 T +G+ + + D+ + + A L + + ++K +++L+ Sbjct: 208 FTPEGIHILKVMDREETAAYENVSARLMERLRRKEILDKGTGAVLERLKK 257 >gi|167765434|ref|ZP_02437547.1| hypothetical protein BACSTE_03824 [Bacteroides stercoris ATCC 43183] gi|167697062|gb|EDS13641.1| hypothetical protein BACSTE_03824 [Bacteroides stercoris ATCC 43183] Length = 518 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 20/264 (7%), Positives = 68/264 (25%), Gaps = 37/264 (14%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 + I VS+ +++ + +NG+ + + Sbjct: 8 LVMIFSGVSWFAFSQQDPVLMRVNGKDVLRSEFEYYYNKDAAS----------------- 50 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + + + + D +++ Sbjct: 51 -----------------FASGYVAPEKYAERFADFKLKVSAAETAGLDTALSFREKVENY 93 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++K+ + + + +P N + Sbjct: 94 RNRLIKSYLTDTAVIENEARRLYDKMKAGHHAGRVRVSHIFKYLPQNVSGHALRKAVAGM 153 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYV 262 D+ LR + + + D + ++ + +F+N+ + S + P+ Sbjct: 154 DSIYEYLRRNQTPEAFDACVKRFSDEK--QPFWVSWLQMPVEFENVAFELSAGEVSQPFF 211 Query: 263 TQKGVEYIAICDKRDLGGEIALKA 286 T +G+ + + ++ ++ +K Sbjct: 212 TPQGIHIVKVIERMEMPSFDDVKN 235 Score = 37.0 bits (83), Expect = 4.1, Method: Composition-based stats. Identities = 23/266 (8%), Positives = 75/266 (28%), Gaps = 21/266 (7%) Query: 56 ISKRIALLKLQKINGELEK--IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 + K + EL + + L K + A Sbjct: 258 LKKEYGYAPDKTGMDELIRTGQTKRTLFTLAGKSYTGNDFICFAVAYPAGIRRQLDAFVM 317 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 + + L+++ + + + + + + + + E + +K ++ Sbjct: 318 KTVLDYENVCLERKYPELRYQVEEYRNRLLLDKITGQEIQKRIESDEAGLQTYFEKHRSD 377 Query: 174 TV---REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 + Y + Q + F++ ++ + +RL + + ++ + Sbjct: 378 YQWREQRYKGIVLHGVSKRIVKQARKFLKSLPEEEWKDAIRLTFNAGAQPQIQAEQGTFA 437 Query: 231 IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 G + K + + P+ A+ K+ + + Sbjct: 438 SGD------NVYVDDLVFKGKDAAPMVSFPFT--------AVLGKKVKAPDD--YREVKD 481 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHY 316 + E +++ +LR++A + Sbjct: 482 RVVTDYRNCLEKQWITRLRTSAKVEI 507 >gi|197119010|ref|YP_002139437.1| PpiC-type peptidylprolyl cis-trans isomerase [Geobacter bemidjiensis Bem] gi|197088370|gb|ACH39641.1| peptidylprolyl cis-trans isomerase, PpiC-type [Geobacter bemidjiensis Bem] Length = 93 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 20/80 (25%), Gaps = 1/80 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 ++ + + + + G+ + +F + + Sbjct: 12 ATEQECVALKTKIESGADFGDCARESSLCPSGNQGGRLGEFRPGQMVREFDEVVFSGEVG 71 Query: 256 NTTNPYVTQKGVEYIAICDK 275 P TQ G I I + Sbjct: 72 KVLGPVKTQFGYHLIEIMSR 91 >gi|99035882|ref|ZP_01314934.1| hypothetical protein Wendoof_01000229 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 413 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 82/245 (33%), Gaps = 22/245 (8%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALLK-----LQKINGELEKIAVQELIVETLKKQEIE 91 A I +NGE I++ DI KRI + E + ++ELI E + E + Sbjct: 50 ATEIEIVADVNGEPISNLDIEKRINFINSLFGTQSVNQKEAKPQVLRELIDEIIIINEAQ 109 Query: 92 KSGITFDSNTVNYFFVQHARN-TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 + I + ++ + L A + +++K I ++ + Q +W +++ Sbjct: 110 RLNIKLSNEELDNAIMLFLTQSFKLKANEVDQYIEKHNIDLGILRKQIKCQLLWSKIIEV 169 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + E+ K++ + ++ D + + ++ Sbjct: 170 RIVPFINISDKEVDDVKRQTEKPDYLITFQEFIIPDQKDKDVYGIAEDLVKKLRNSDNPE 229 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 K + GK + +LE ++ P+ +G I Sbjct: 230 SPIKMRKATVNLSQL-----KGKLKSVLEG-----------LETSDIAGPFSFSEGYSVI 273 Query: 271 AICDK 275 + DK Sbjct: 274 KVIDK 278 >gi|311276483|ref|XP_003135228.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like [Sus scrofa] Length = 131 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT-- 258 +I +A E K +++ G ++ + FQ + Sbjct: 50 KILEAMEKLKSGMKFNEVAAQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPISVLDK 108 Query: 259 -----NPYVTQKGVEYIAICDKR 276 P T+ G I + ++ Sbjct: 109 PVFTDPPVKTKFGYHIIMVEGRK 131 >gi|149277612|ref|ZP_01883753.1| peptidylprolyl cis-trans isomerase [Pedobacter sp. BAL39] gi|149231845|gb|EDM37223.1| peptidylprolyl cis-trans isomerase [Pedobacter sp. BAL39] Length = 695 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 13/121 (10%), Positives = 36/121 (29%), Gaps = 6/121 (4%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 K + +++ G+ + +F+N + Sbjct: 359 DKATKLADSLKTLVQNGANFATLAAQYSVDGSKDKGGELGTFSRGQMVAEFENAAFNGKA 418 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN--TPTKIEKHEAE---YVKKLRS 310 +Q GV I I +K+ ++ AY+ + + + ++ +++ Sbjct: 419 GDLKVVTSQFGVHLIKI-EKQVGSSKVVKLAYIEKSLAPSNKTKDAAYKKASNFLAEVKD 477 Query: 311 N 311 N Sbjct: 478 N 478 >gi|56708512|ref|YP_170408.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. tularensis SCHU S4] gi|89256686|ref|YP_514048.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. holarctica LVS] gi|110670983|ref|YP_667540.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. tularensis FSC198] gi|115315096|ref|YP_763819.1| peptidylprolyl isomerase [Francisella tularensis subsp. holarctica OSU18] gi|118497285|ref|YP_898335.1| parvulin-like peptidyl-prolyl isomerase domain-containing protein [Francisella tularensis subsp. novicida U112] gi|134301685|ref|YP_001121653.1| peptidyl-prolyl cis-trans isomerase C [Francisella tularensis subsp. tularensis WY96-3418] gi|156502846|ref|YP_001428911.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010492|ref|ZP_02275423.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. holarctica FSC200] gi|187931510|ref|YP_001891494.1| parvulin-like peptidyl-prolyl isomerase domain [Francisella tularensis subsp. mediasiatica FSC147] gi|194323588|ref|ZP_03057365.1| ppic-type ppiase domain protein, putative [Francisella tularensis subsp. novicida FTE] gi|208779078|ref|ZP_03246424.1| ppic-type ppiase domain protein, putative [Francisella novicida FTG] gi|224457677|ref|ZP_03666150.1| parvulin-like peptidyl-prolyl isomerase domain [Francisella tularensis subsp. tularensis MA00-2987] gi|254369547|ref|ZP_04985558.1| hypothetical protein FTAG_01432 [Francisella tularensis subsp. holarctica FSC022] gi|254371139|ref|ZP_04987141.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254875361|ref|ZP_05248071.1| peptidyl-prolyl cis-trans isomerase C [Francisella tularensis subsp. tularensis MA00-2987] gi|290954279|ref|ZP_06558900.1| peptidyl-prolyl cis-trans isomerase C [Francisella tularensis subsp. holarctica URFT1] gi|295312306|ref|ZP_06803095.1| peptidyl-prolyl cis-trans isomerase C [Francisella tularensis subsp. holarctica URFT1] gi|11228666|gb|AAG33118.1|AF240631_1 putative peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. tularensis] gi|11228669|gb|AAG33119.1|AF247642_1 putative peptidylprolyl isomerase [Francisella tularensis subsp. holarctica] gi|11228672|gb|AAG33120.1|AF247685_1 putative parvulin [Francisella tularensis subsp. mediasiatica] gi|11228676|gb|AAG33122.1|AF247687_1 putative parvulin [Francisella tularensis subsp. holarctica] gi|11228678|gb|AAG33123.1|AF247688_1 putative parvulin [Francisella novicida] gi|11228680|gb|AAG33124.1|AF247689_1 putative parvulin [Francisella tularensis subsp. tularensis] gi|11228682|gb|AAG33125.1|AF247690_1 putative parvulin [Francisella tularensis subsp. holarctica] gi|21952446|gb|AAM82565.1|AF524865_1 peptidyl-prolyl trans isomerase [Francisella tularensis subsp. tularensis] gi|56605004|emb|CAG46105.1| Peptidyl-prolyl cis-trans isomerase. [Francisella tularensis subsp. tularensis SCHU S4] gi|89144517|emb|CAJ79832.1| Peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. holarctica LVS] gi|110321316|emb|CAL09488.1| Peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. tularensis FSC198] gi|115129995|gb|ABI83182.1| peptidylprolyl isomerase [Francisella tularensis subsp. holarctica OSU18] gi|118423191|gb|ABK89581.1| parvulin-like peptidyl-prolyl isomerase domain [Francisella novicida U112] gi|134049462|gb|ABO46533.1| peptidyl-prolyl cis-trans isomerase C [Francisella tularensis subsp. tularensis WY96-3418] gi|151569379|gb|EDN35033.1| hypothetical protein FTBG_00899 [Francisella tularensis subsp. tularensis FSC033] gi|156253449|gb|ABU61955.1| peptidyl-prolyl cis-trans isomerase domain protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|157122501|gb|EDO66636.1| hypothetical protein FTAG_01432 [Francisella tularensis subsp. holarctica FSC022] gi|187712419|gb|ACD30716.1| parvulin-like peptidyl-prolyl isomerase domain [Francisella tularensis subsp. mediasiatica FSC147] gi|194322443|gb|EDX19924.1| ppic-type ppiase domain protein, putative [Francisella tularensis subsp. novicida FTE] gi|208744878|gb|EDZ91176.1| ppic-type ppiase domain protein, putative [Francisella novicida FTG] gi|254841360|gb|EET19796.1| peptidyl-prolyl cis-trans isomerase C [Francisella tularensis subsp. tularensis MA00-2987] gi|282159725|gb|ADA79116.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. tularensis NE061598] gi|328676774|gb|AEB27644.1| Peptidyl-prolyl cis-trans isomerase ppiC [Francisella cf. novicida Fx1] Length = 92 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 22/81 (27%), Gaps = 2/81 (2%) Query: 197 FVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQ 254 + + ++ K + G + + P+F + + Sbjct: 11 QSESECQQIKKDITEGKITFEEAARKHSLCPSGARGGDLGTFSQGQMVPEFDRVVFNDEL 70 Query: 255 NNTTNPYVTQKGVEYIAICDK 275 + P TQ G + I + Sbjct: 71 HKVHGPVQTQFGYHLLEITSR 91 >gi|315304396|ref|ZP_07874697.1| peptidylprolyl isomerase PrsA1 [Listeria ivanovii FSL F6-596] gi|313627234|gb|EFR96066.1| peptidylprolyl isomerase PrsA1 [Listeria ivanovii FSL F6-596] Length = 245 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 17/211 (8%), Positives = 58/211 (27%), Gaps = 4/211 (1%) Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + G + ++ + + + + + + + Sbjct: 8 FEKILGDKYKVTDEQVNSEFKKYKSQYGDQFDAVLAQSGLTEETFKSQLKYNLLVQKATE 67 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IH 227 + + + + + + K+ E+ K + +++++ Sbjct: 68 ANTDTSDKALKEYYKTWQPDITVSHILVADEAKAKEVEQKLKDGAKFADLAKEYSTDTAT 127 Query: 228 DVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 + G+ + P F+ K++ + + P TQ G I + K Sbjct: 128 KDNGGELAPFGPGKMDPAFEKAAYALKNKGDISAPVKTQYGYHIIQMDKPATKTTYDKDK 187 Query: 286 AYLSA-QNTPTKIEKHEAEYVKKLRSNAIIH 315 + ++ + +KK +A + Sbjct: 188 KAVKESYLQSQLTTENMQKTLKKEYKDANVK 218 >gi|261403937|ref|YP_003240178.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. Y412MC10] gi|261280400|gb|ACX62371.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. Y412MC10] Length = 311 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 28/295 (9%), Positives = 79/295 (26%), Gaps = 30/295 (10%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 + W S+ +I IT+ + + + + ++ Sbjct: 32 FSQEASPPWKTGSQPVASIQDRAITEDEWVDELK--------KRYGREMLMTMLNRHAVA 83 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E + GI + V +R+ G FL + + L ++ + + Sbjct: 84 LEAKAKGIDVTTAEVETEIEVMSRSYG----SKERFLSEMEDQLGITESELKTETTYRLL 139 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 ++ E +I + ++ + + + + + + + Sbjct: 140 LEKIATSDVHIEEQQIDSYLEQYPDQFRPKKQLNLSMIEVASEDEAERVM---------D 190 Query: 208 SRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDL---HPQFQNLLKKSQNNTTNPYVT 263 + + + + G+ + E D + L + P Sbjct: 191 RLENGEDFADLAAQVSLDEYTREDGGQIGLVEEDDPFLPPELLEAALSLEPGDIAGPISL 250 Query: 264 QKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN--AII 314 + + D + E +++ + Q + ++LR A I Sbjct: 251 TDTYAIVYVRDIIEPQAPSEESIRKAVRKQLALEQSVSLTELE-RQLREKYEARI 304 >gi|325981959|ref|YP_004294361.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Nitrosomonas sp. AL212] gi|325531478|gb|ADZ26199.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Nitrosomonas sp. AL212] Length = 322 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 89/308 (28%), Gaps = 43/308 (13%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN- 69 I ++ F+ ++ + I ++NG IT ++ I ++ Sbjct: 7 RMISIIGLVFITVLTLTACDKESNTKKSGQSIV-SVNGSEITMLQLNDEIRRSNIRADQY 65 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + ++ LI L E ++ + + +A Sbjct: 66 ESAREQLLESLIARQLIVDEAIRNKLDRTPEVMQARERANA------------------- 106 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 Q I ++ + EI QK + + + + Sbjct: 107 -----------QVIAQAYLQGIISKIEKPSKAEIEDYFQKNPELFAQR---KQFDLTTVR 152 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + KR+ DA +S + +K + +DL Q + Sbjct: 153 IATSDVSEELKRVIDAAKSIEEVVTWLDKNKIQY-------FRTLATRSSADLPLQLVLM 205 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKKL 308 L++ +T Q+ I++ ++ A + K ++ + +L Sbjct: 206 LREKSKDTIYIINEQEKSILISVNAIKNNSVSETAAAPQIERFLINQKYKEATDAEITRL 265 Query: 309 RSNAIIHY 316 R++A I Y Sbjct: 266 RTSAKIEY 273 >gi|120600309|ref|YP_964883.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. W3-18-1] gi|126172833|ref|YP_001048982.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS155] gi|146291762|ref|YP_001182186.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella putrefaciens CN-32] gi|153002247|ref|YP_001367928.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS185] gi|160876971|ref|YP_001556287.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS195] gi|217974834|ref|YP_002359585.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS223] gi|120560402|gb|ABM26329.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. W3-18-1] gi|125996038|gb|ABN60113.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS155] gi|145563452|gb|ABP74387.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella putrefaciens CN-32] gi|151366865|gb|ABS09865.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS185] gi|160862493|gb|ABX51027.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS195] gi|217499969|gb|ACK48162.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS223] gi|315269174|gb|ADT96027.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS678] gi|319424998|gb|ADV53072.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella putrefaciens 200] Length = 92 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 25/75 (33%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + ++F+S G + + PQF + + Sbjct: 15 KEQAEDIVKQLNNGANFAVLAKRFSSCPSAKKGGDLGEFKKGQMVPQFDKVAFSGELLVP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G + + Sbjct: 75 HIVKTKFGWHVVKVL 89 >gi|302787911|ref|XP_002975725.1| hypothetical protein SELMODRAFT_103417 [Selaginella moellendorffii] gi|300156726|gb|EFJ23354.1| hypothetical protein SELMODRAFT_103417 [Selaginella moellendorffii] Length = 253 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 16/180 (8%), Positives = 58/180 (32%), Gaps = 9/180 (5%) Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + I+ I V + + + + + ++ L D Sbjct: 1 MWPRQQRIECIAAQVRFRENSATFIFIPRDSSLFPSPGTSGNQDREILVQHLLVKEDQLQ 60 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 ++ +++ + + + + + G ++ + + P+F+ Sbjct: 61 LLTELQKRLVQEDIDL-------SDLATEHSICPSKKNGGMLGWVSKGRMVPEFEEAAFS 113 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSAQNTPTKIEKHEAEY-VKKLRS 310 + N T+ G + + +R G + ++ L+ + + ++ V++L+ Sbjct: 114 APLNKIVRAKTKFGWHLLQVLSERFSGFLVEIQPEELAKRMKDPEFRENAQLLDVRELKE 173 >gi|54302531|ref|YP_132524.1| putative peptidyl-prolyl cis-trans isomerase C [Photobacterium profundum SS9] gi|46915953|emb|CAG22724.1| putative peptidyl-prolyl cis-trans isomerase C [Photobacterium profundum SS9] Length = 122 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 4/77 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 Q++ +D E + K +K+++ S G + + PQF + Sbjct: 45 QEKAEDIIEQLKKGAKFQTLAKKYSNCPSGKSGGDLGEFRKGQMVPQFDKV--CFTGELL 102 Query: 259 NP--YVTQKGVEYIAIC 273 P T+ G + + Sbjct: 103 TPHLVKTKFGWHIVKVL 119 >gi|16800550|ref|NP_470818.1| hypothetical protein lin1482 [Listeria innocua Clip11262] gi|46396989|sp|Q92BR2|PRSA1_LISIN RecName: Full=Foldase protein prsA 1; Flags: Precursor gi|16413955|emb|CAC96713.1| lin1482 [Listeria innocua Clip11262] Length = 294 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 28/281 (9%), Positives = 78/281 (27%), Gaps = 39/281 (13%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 S + +T ++ + + VQ+L + + + + + ++ Sbjct: 24 SSAVVKTDAGNVTQDELYEAMKT--------TYGNEVVQQLTFKKILEDKYTVTEKEVNA 75 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 E + + +N K + +V+ Sbjct: 76 EY------------KKYEEQYGDSFESTLSSNNLTKTSFKENLEYNLLVQKATEANMNVS 123 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 E ++ + +R +L + K+ + K + Sbjct: 124 ESKLKTYYKTW----EPNITVRHIL-----------VDDEATAKEIQTKLKNGEKFADLA 168 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKR 276 +++++ + G ++ F+ K++++ + + G I + K Sbjct: 169 KEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALKNKDDVSGIVKSTYGYHLIQLVKKT 228 Query: 277 DLGGEIALKAYLS-AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G KA + A ++ +KK A I Sbjct: 229 EKGTYAKEKANVKAAYIKSQLTSENMTAALKKELKAANIDI 269 >gi|313618921|gb|EFR90776.1| foldase protein PrsA [Listeria innocua FSL S4-378] Length = 294 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 28/281 (9%), Positives = 79/281 (28%), Gaps = 39/281 (13%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 S + +T ++ + + VQ+L + + + + + ++ Sbjct: 24 SSAVVKTDAGNVTQDELYEAMKT--------TYGNEVVQQLTFKKILEDKYTVTEKEVNA 75 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 E + + +N K + +V+ Sbjct: 76 EY------------KKYEEQYGDSFESTLSSNNLTKTSFKENLEYNLLVQKATEANMNVS 123 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 E ++ + + +R +L + K+ + K + Sbjct: 124 ESKLKTYYKTW----EPDITVRHIL-----------VDDEATAKEIQTKLKNGEKFADLA 168 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKR 276 +++++ + G ++ F+ K++++ + + G I + K Sbjct: 169 KEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALKNKDDVSGIVKSTYGYHLIQLVKKT 228 Query: 277 DLGGEIALKAYLS-AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G KA + A ++ +KK A I Sbjct: 229 EKGTYAKEKANVKAAYIKSQLTSENMTAALKKELKAANIDI 269 >gi|281500878|pdb|3KAD|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1 Inhibitors gi|281500879|pdb|3KAF|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1 Inhibitors gi|317455039|pdb|2XP6|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors By Structure-Guided Fragment Evolution Length = 167 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 61 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 120 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 121 KARGDLGAFSRGQMAKPFEDASFALRTGEMSGPVFTDSGIHII 163 >gi|291615694|ref|YP_003518436.1| PpiC [Pantoea ananatis LMG 20103] gi|291150724|gb|ADD75308.1| PpiC [Pantoea ananatis LMG 20103] gi|327395959|dbj|BAK13381.1| peptidyl-prolyl cis-trans isomerase C PpiC [Pantoea ananatis AJ13355] Length = 93 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 8/76 (10%), Positives = 17/76 (22%), Gaps = 1/76 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 + + E + K + + G + F + + Sbjct: 15 EAQAIALLEKLQKGENFQQLARKHSVCPSGRNGGDLGEFRRGKMVAAFDKAVFTCPLLQP 74 Query: 258 TNPYVTQKGVEYIAIC 273 P T G I + Sbjct: 75 FGPVKTAFGYHIIKVL 90 >gi|218961685|ref|YP_001741460.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167730342|emb|CAO81254.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 679 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 33/315 (10%), Positives = 81/315 (25%), Gaps = 31/315 (9%) Query: 5 VFTSLSDFIKLLTTYFVLIIFC--IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL 62 +F L ++ ++ + + + +S + S I NG VIT DI +I+ Sbjct: 1 MFRHLHFYLGIVLMLVSIFLTAENVPVTLSKNNSNNDSDILAEYNGGVITRKDIELKISK 60 Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 L Q + + + + + + Sbjct: 61 LPPQYQS--------------------------RYKTVGGQMEVLNAIAAEEVFYQKARQ 94 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + + + + K + + ++ + + + + I Sbjct: 95 MGLENDPIVLEHISAIEKRFYIQEYYKRNVSDLVFITDDDLLSYYNQNLSQFYQYPYITI 154 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI-GKAQYLLESD 241 + + + + + + + + +I +V + G + Sbjct: 155 DYIQAENEDAAKKALAELKKGISFATVSDTYNQNSYAKGLKGRIKNVRLNGNIPGIGNDI 214 Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 + N P T G + I D + G + + E Sbjct: 215 ELENIIRNAQVDTLNFIGPVKTDYGWHILRIVDW--IEGYQKDFNEVKPEIEQRVRPMKE 272 Query: 302 AEYVKKLRSNAIIHY 316 E + L N I Y Sbjct: 273 RELLNALTDNLKIKY 287 >gi|159162312|pdb|1FJD|A Chain A, Human Parvulin-Like Peptidyl Prolyl CisTRANS ISOMERASE, Hpar14 Length = 104 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E + +++ G ++ + FQ Sbjct: 23 KIMEAMEKLKSGMRFNEVAAQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDK 81 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 82 PVFTDPPVKTKFGYHIIMVEGRK 104 >gi|332532929|ref|ZP_08408801.1| peptidyl-prolyl cis-trans isomerase PpiC [Pseudoalteromonas haloplanktis ANT/505] gi|332037595|gb|EGI74047.1| peptidyl-prolyl cis-trans isomerase PpiC [Pseudoalteromonas haloplanktis ANT/505] Length = 92 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 25/75 (33%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 ++ +D + + K +K++S G + PQF + K Sbjct: 15 KEIAEDIIKQLGKGAKFQTLAKKYSSCPSGKKGGDLGEFRRGQMVPQFDKIAFKGAILEP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G I + Sbjct: 75 HLVKTKFGWHVIKVL 89 >gi|308050216|ref|YP_003913782.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ferrimonas balearica DSM 9799] gi|307632406|gb|ADN76708.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ferrimonas balearica DSM 9799] Length = 93 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 9/76 (11%), Positives = 23/76 (30%), Gaps = 1/76 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN-NT 257 + + ++ + + +K ++ G + D+ P F + Sbjct: 15 EAKAQELLQQLEKGANFQTLAKKHSTCPSGKKGGHLGEFRKGDMVPTFDKAVFTGPILKP 74 Query: 258 TNPYVTQKGVEYIAIC 273 P T+ G I + Sbjct: 75 IGPVKTKFGFHIIKVL 90 >gi|183179758|ref|ZP_02957969.1| peptidyl-prolyl cis-trans isomerase D [Vibrio cholerae MZO-3] gi|183013169|gb|EDT88469.1| peptidyl-prolyl cis-trans isomerase D [Vibrio cholerae MZO-3] Length = 157 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 13/157 (8%), Positives = 42/157 (26%), Gaps = 17/157 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ ++ + +++ F + +Y + + + I+ GD + Sbjct: 1 MMDRLREGVNSIAVKIILGLIILSFIFAGVGNYL-ISGGNNAAAKVGNAEISRGDFEQAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + K + ++ + L +Q G+ V Sbjct: 60 QNERNRMQAQLGDYFSNLLADPAYVASFRKSVLDRMVNDLLLEQHAASLGLRLSDEQVRQ 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 ++ + D +++ Q Sbjct: 120 LILEIPQFQSQGVFDSAAYQRLCVAQLTPEMYADTTQ 156 >gi|113970791|ref|YP_734584.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-4] gi|114048018|ref|YP_738568.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-7] gi|117921059|ref|YP_870251.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. ANA-3] gi|113885475|gb|ABI39527.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-4] gi|113889460|gb|ABI43511.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-7] gi|117613391|gb|ABK48845.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. ANA-3] Length = 92 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 25/78 (32%), Gaps = 1/78 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ + ++ L +S G+ + +F ++ + N Sbjct: 14 EEQCQALKQQILDGADFAQIARAHSSCPSGAQGGELGSFGPGMMVREFDEVVFSAPLNVV 73 Query: 259 -NPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 74 QGPVKTQFGYHLLEVTSR 91 >gi|302697383|ref|XP_003038370.1| hypothetical protein SCHCODRAFT_63954 [Schizophyllum commune H4-8] gi|300112067|gb|EFJ03468.1| hypothetical protein SCHCODRAFT_63954 [Schizophyllum commune H4-8] Length = 165 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 9/91 (9%), Positives = 22/91 (24%), Gaps = 1/91 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + P + ++ + K + + G + Sbjct: 71 RPSSWKEPTITRSKEEAIEILRGYQAQIGGNPDKFAELAQAHSDCSSHAHGGDLGWFSRG 130 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + F++ ++ T GV I Sbjct: 131 QMQKPFEDTTYGLEVGQMSDVISTDSGVHLI 161 >gi|194692444|gb|ACF80306.1| unknown [Zea mays] Length = 306 Score = 57.4 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 10/98 (10%), Positives = 28/98 (28%), Gaps = 1/98 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 + + + + + G ++ + P+F+ + N T+ Sbjct: 120 KNIIAEGADLSDLAVEHSLCPSKENGGMLGWVRRGQMVPEFEEAAFSAPLNKVVRCKTKF 179 Query: 266 GVEYIAICDKRDLGGEIALK-AYLSAQNTPTKIEKHEA 302 G + + +RD + L A+ + Sbjct: 180 GWHLVQVLAERDQCVLQDIDPEELHAKLQDPSFLEEAQ 217 >gi|332375258|gb|AEE62770.1| unknown [Dendroctonus ponderosae] Length = 159 Score = 57.4 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 11/104 (10%), Positives = 26/104 (25%), Gaps = 1/104 (0%) Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 Q + + R + + ++ E+ K++ Sbjct: 52 QCSHLLVKHKDSRRPSSWREEVITRSKEEALELVKMYREQIAQGKASFAELATKYSDCSS 111 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 G + + F++ ++P T GV I Sbjct: 112 AKRGGDLGPFGKGAMQKPFEDSAFSLKVGELSDPVFTDSGVHII 155 >gi|313623769|gb|EFR93906.1| foldase protein PrsA [Listeria innocua FSL J1-023] Length = 294 Score = 57.4 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 28/281 (9%), Positives = 79/281 (28%), Gaps = 39/281 (13%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 S + +T ++ + + VQ+L + + + + + ++ Sbjct: 24 SSAVVKTDAGNVTQDELYEAMKT--------TYGNEVVQQLTFKKILEDKYTVTEKEVNA 75 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 E + + +N K + +V+ Sbjct: 76 EY------------KKYEEQYGDSFESTLSSNNLTKTSFKENLEYNLLVQKATEANMNVS 123 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 E ++ + + +R +L + K+ + K + Sbjct: 124 ESKLKTYYKTW----EPDITVRHIL-----------VDDEATAKEIQTKLKNGEKFADLA 168 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKR 276 +++++ + G ++ F+ K++++ + + G I + K Sbjct: 169 KEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALKNKDDISGIVKSTYGYHLIQLVKKT 228 Query: 277 DLGGEIALKAYLS-AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + G KA + A ++ +KK A I Sbjct: 229 EKGTYAKEKANVKAAYIKSQLTSENMTAALKKELKAANIDI 269 >gi|254585847|ref|XP_002498491.1| ZYRO0G11572p [Zygosaccharomyces rouxii] gi|238941385|emb|CAR29558.1| ZYRO0G11572p [Zygosaccharomyces rouxii] Length = 162 Score = 57.4 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 6/77 (7%), Positives = 23/77 (29%), Gaps = 1/77 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQ 254 + ++ + + ++ + G + + ++ P F+ + Sbjct: 83 EQAIQELEQLQNRIESGESFESLAKERSDCSSFKRGGDLGWFGKGEMQPTFEKTAFHLNV 142 Query: 255 NNTTNPYVTQKGVEYIA 271 ++ + GV I Sbjct: 143 GQVSSIVESDSGVHLIK 159 >gi|241668619|ref|ZP_04756197.1| parvulin-like peptidyl-prolyl isomerase domain-containing protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877153|ref|ZP_05249863.1| peptidyl-prolyl cis-trans isomerase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|11228674|gb|AAG33121.1|AF247686_1 putative parvulin [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843174|gb|EET21588.1| peptidyl-prolyl cis-trans isomerase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 92 Score = 57.4 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 23/81 (28%), Gaps = 2/81 (2%) Query: 197 FVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQ 254 + + ++ +K + G + + P+F + + Sbjct: 11 QSESECQQIKKDISEGKITFEEAAKKHSLCPSGARGGDLGTFSQGQMVPEFDKVVFNDEL 70 Query: 255 NNTTNPYVTQKGVEYIAICDK 275 + P TQ G + I + Sbjct: 71 HKVHGPVQTQFGYHLLEITSR 91 >gi|332307005|ref|YP_004434856.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174334|gb|AEE23588.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 91 Score = 57.4 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 20/76 (26%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN- 255 +K + + + +K + G + F N++ K Sbjct: 11 KTEKEAQQLKTQLDKGANFQQLAKKHSLCPSGKKGGDLGEFSPGTMVKAFDNVVFKKDIL 70 Query: 256 NTTNPYVTQKGVEYIA 271 P TQ G I Sbjct: 71 TVHGPVKTQFGFHLIK 86 >gi|58698186|ref|ZP_00373108.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila ananassae] gi|225630920|ref|YP_002727711.1| hypothetical protein WRi_012370 [Wolbachia sp. wRi] gi|58535336|gb|EAL59413.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila ananassae] gi|225592901|gb|ACN95920.1| hypothetical protein WRi_012370 [Wolbachia sp. wRi] Length = 381 Score = 57.4 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 81/245 (33%), Gaps = 22/245 (8%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALLK-----LQKINGELEKIAVQELIVETLKKQEIE 91 A I +NGE I++ DI KRI + E + ++ELI E + E + Sbjct: 18 ATEIEIVADVNGEPISNLDIEKRINFINSLFGTQSVNQKEAKPQVLRELIDEIVIINEAQ 77 Query: 92 KSGITFDSNTVNYFFVQHARN-TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 + I + ++ + L A + +++K I ++ + Q +W +++ Sbjct: 78 RLNIKLSNEELDNAIMLFLTQSFKLKANEVDQYIEKHNIDLGILRKQIKCQLLWSKIIEV 137 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + EI K++ + ++ D + + + Sbjct: 138 RIVPFINISDKEINDVKRQTEKPNYLITFQEFIIPDQKDKDVYGIAEDLVKKLRNSNNPE 197 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 K + GK + +LE ++ P+ +G I Sbjct: 198 SPIKMRKATVNLSQL-----KGKLKSVLEG-----------LETSDIAGPFSFSEGYSVI 241 Query: 271 AICDK 275 + DK Sbjct: 242 KVIDK 246 >gi|332187280|ref|ZP_08389019.1| hypothetical protein SUS17_2464 [Sphingomonas sp. S17] gi|332012701|gb|EGI54767.1| hypothetical protein SUS17_2464 [Sphingomonas sp. S17] Length = 296 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 31/317 (9%), Positives = 70/317 (22%), Gaps = 57/317 (17%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKS---WAMSSRIRTTINGEVITDGDISKRIALL--- 63 I + + +I + + + ++ T+NG I D+ +++ L Sbjct: 22 RSLILYAISAVLGLIIAGYGLFTAQGTRVGGIAPENAATVNGAPILRADLIQQVGSLYSI 81 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 + + + A+ ++I E L Q + G+ D V V Sbjct: 82 SFAQASAAQRRKALDDMIREELHVQRGIEVGLPADDIDVRAALVGA-------------- 127 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 V ++ + E+ + Sbjct: 128 -------------------TDAQVAQDTLTEQPSAAELRA-WYVAHPDTYAAEGTMTLHE 167 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 + A L+ + E++ Sbjct: 168 WIVPGAADAARAVAALRAGTPAATLGLKTSGRVDDGEEYYFAARIHLG-----------P 216 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIE--K 299 F + + P G +A+ + + KI + Sbjct: 217 ALFAIARRMRAGEVSEPIHAADGFHILAMVANAPPVPTPFAVARDQVLRDVQADKIARLQ 276 Query: 300 HEAEYVKKLRSNAIIHY 316 + L A I Sbjct: 277 GANDRF--LYKRADIKI 291 >gi|328675822|gb|AEB28497.1| Peptidyl-prolyl cis-trans isomerase ppiC [Francisella cf. novicida 3523] Length = 92 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 22/81 (27%), Gaps = 2/81 (2%) Query: 197 FVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQ 254 + + ++ K + G + + P+F + + Sbjct: 11 QSESECQQIKKDITEGKITFEEAARKHSLCPSGARGGDLGTFSQGQMVPEFDRVVFNDEL 70 Query: 255 NNTTNPYVTQKGVEYIAICDK 275 + P TQ G + I + Sbjct: 71 HTVHGPVQTQFGYHLLEITSR 91 >gi|194273637|gb|ACF39177.1| putative parvulin [Francisella novicida] Length = 88 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 22/81 (27%), Gaps = 2/81 (2%) Query: 197 FVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQ 254 + + ++ K + G + + P+F + + Sbjct: 7 QSESECQQIKKDITEGKITFEEAARKHSLCPSGARGGDLGTFSQGQMVPEFDRVVFNDEL 66 Query: 255 NNTTNPYVTQKGVEYIAICDK 275 + P TQ G + I + Sbjct: 67 HTVHGPVQTQFGYHLLEITSR 87 >gi|317406836|gb|EFV86940.1| hypothetical protein HMPREF0005_05960 [Achromobacter xylosoxidans C54] Length = 104 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 27/75 (36%), Gaps = 3/75 (4%) Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNT 293 + + L P+ + ++++ P + G + + D R +K L A Sbjct: 1 MPLAQLTPEMRPVIEQLKAGEVAAPVQSAAGFHILKLVDLRAASVAPYEQVKDELRAALR 60 Query: 294 PTKIEKHEAEYVKKL 308 + E Y++ L Sbjct: 61 TQRQELAARAYLEGL 75 >gi|219124233|ref|XP_002182413.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406374|gb|EEC46314.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 76 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 19/72 (26%), Gaps = 3/72 (4%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ---NLLKKSQNNTTNPYVT 263 + +K+++ G + + P F T P T Sbjct: 5 KINNDANLFAKYAKKYSACPSKNQGGNLGKFKQGAMAPPFDKACFSPISKVGETLGPIQT 64 Query: 264 QKGVEYIAICDK 275 Q G I I + Sbjct: 65 QFGWHLIYIQSR 76 >gi|27468439|ref|NP_765076.1| hypothetical protein SE1521 [Staphylococcus epidermidis ATCC 12228] gi|46396902|sp|Q8CNR4|PRSA_STAES RecName: Full=Foldase protein prsA; Flags: Precursor gi|27315986|gb|AAO05120.1|AE016749_66 prsA [Staphylococcus epidermidis ATCC 12228] Length = 325 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 94/309 (30%), Gaps = 27/309 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +KL+ V + + + + S A S+ + +I+ ++A + + ++ Sbjct: 1 MKLMNKIIVPVTASALLLGACGSNATESK-----DNTLISSKAGDVKVADVMKKMGKEQI 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + ++ + L +K D+ ++ + + G + S + Sbjct: 56 ANTSFSIVLNKVL----ADKYKDKVDTKDIDKDIKKEEKQYGGKDQFESMLKQQ-----G 106 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 Q K + K + EI + LI+ S L Sbjct: 107 MSFDDYKEQKKLSAYQKQLLLDKVNVSDKEIK-----ENSKKASHILIKVKSKSSDKEGL 161 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-L 250 ++ +K K +E K +K + G Y+++ + F+ Sbjct: 162 SDKKAKEKAEKIQKEVEKNPNKFGEIAKKESMDSSSAKKDGSLGYVIKGQMVDSFEKALF 221 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH---EAEYVKK 307 K + + T G I + K+ + + K++K + K+ Sbjct: 222 KLKEGEVSKVVKTDYGYHIIKAD---KETDFNSEKSNIKQKLIEEKVQKKPKLLTDAYKE 278 Query: 308 LRSNAIIHY 316 L + Y Sbjct: 279 LLKEYKVDY 287 >gi|312129915|ref|YP_003997255.1| ppic-type peptidyl-prolyl cis-trans isomerase [Leadbetterella byssophila DSM 17132] gi|311906461|gb|ADQ16902.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leadbetterella byssophila DSM 17132] Length = 768 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 18/220 (8%), Positives = 57/220 (25%), Gaps = 4/220 (1%) Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 + ++ D + F+ + + Q + Sbjct: 51 RKELSIDLENMVKLDSGSHEEILQELLQRKLFIAEARSQGMDTTENFREQI--QSHLSLA 108 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + + + P + + + ++ Sbjct: 109 VASALEDHSEIRKLENEAYERYLKEVNASHLFVPISPYAAPADTLKLYNELLQIRNMAIQ 168 Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLH-PQFQNLLKKSQNNTTNPYVTQKGVEY 269 + ++++ S G+ + L P + K +++ + P T G Sbjct: 169 NKDFETQAKRWSKDPKTASSGGQLGWFSVFYLVYPLESAVYKVPKDSISLPVRTPAGYHL 228 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 I + D R G + ++ ++ ++ + + LR Sbjct: 229 IKVNDIRKSSGMVQIQHIFKHIGPESEDKETLRKQLDSLR 268 Score = 41.2 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 14/154 (9%), Positives = 45/154 (29%), Gaps = 3/154 (1%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + +F + +++ ++K++ L +E+ + Sbjct: 226 YHLIKVNDIRKSSGMVQIQHIFKHIGPESEDKETLRKQLDSLRTEILNGLPFETAVEQHS 285 Query: 224 SK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G Q P F+ + + + P + G+ + + D+ Sbjct: 286 DDFNSKPNKGILQPFGVGKTEPGFEEAVFALKKGEISMPIQSSTGLHLVKVIDRLKPLTR 345 Query: 282 IALKAYLSAQNTPTKIEKHEA-EYVKKLRSNAII 314 A+ T ++ + + R+ + Sbjct: 346 SQFIEQNRAKITTDSRGEYLRLKQINDFRAKNNV 379 >gi|163858138|ref|YP_001632436.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Bordetella petrii DSM 12804] gi|163261866|emb|CAP44168.1| PPIC-type PPIASE domain protein [Bordetella petrii] Length = 248 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 18/156 (11%), Positives = 49/156 (31%), Gaps = 4/156 (2%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + ++ + +LF + + + E R + +++ Sbjct: 80 YYEQHPGQFLSGALVEVWHILFQLTPRVDPRRLRARAGEVLQEVHRAAPDAFADYARQYS 139 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGG- 280 + + G+ + D P+F+ + + T+ G + K + Sbjct: 140 NCMSAQEGGRLGDIGRGDTLPEFEQAVFAMPAHTLLDRLVQTRHGFHIVRTGRKVEGTPM 199 Query: 281 -EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 A+ A ++A + +Y++ L A I Sbjct: 200 AFDAVHARIAAWLAQASERRATHQYLQWLVGQARIE 235 >gi|148973943|ref|ZP_01811476.1| peptidyl-prolyl cis-trans isomerase C [Vibrionales bacterium SWAT-3] gi|145965640|gb|EDK30888.1| peptidyl-prolyl cis-trans isomerase C [Vibrionales bacterium SWAT-3] Length = 92 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 26/75 (34%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + + K +K ++ G + + PQF + + Sbjct: 15 KEQAEDIIKQLKKGAKFQTLAKKHSTCPSGKKGGDLGEFQKGQMVPQFDKVCFSGETLVP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G + + Sbjct: 75 HLVKTKFGWHVVKVL 89 >gi|126322893|ref|XP_001363694.1| PREDICTED: similar to protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 [Monodelphis domestica] Length = 159 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 7/106 (6%), Positives = 25/106 (23%), Gaps = 1/106 (0%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + R + + ++ ++ + +++ Sbjct: 50 KVRCSHLLVKHNQSRRPSSWRQEKITRSKEEALELINGYIQKIKSGEDDFETLASQYSDC 109 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 110 SSAKARGDLGTFGRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 155 >gi|57867315|ref|YP_188945.1| protein export protein PrsA [Staphylococcus epidermidis RP62A] gi|293366181|ref|ZP_06612867.1| foldase PrsA [Staphylococcus epidermidis M23864:W2(grey)] gi|81674051|sp|Q5HN96|PRSA_STAEQ RecName: Full=Foldase protein prsA; Flags: Precursor gi|57637973|gb|AAW54761.1| protein export protein PrsA, putative [Staphylococcus epidermidis RP62A] gi|291319703|gb|EFE60063.1| foldase PrsA [Staphylococcus epidermidis M23864:W2(grey)] gi|329734300|gb|EGG70615.1| putative foldase protein PrsA [Staphylococcus epidermidis VCU045] gi|329737249|gb|EGG73503.1| putative foldase protein PrsA [Staphylococcus epidermidis VCU028] Length = 325 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 94/309 (30%), Gaps = 27/309 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +KL+ V + + + + S A S+ + +I+ ++A + + ++ Sbjct: 1 MKLMNKIIVPVTASALLLGACGSNATESK-----DNTLISSKAGDVKVADVMKKMGKEQI 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + ++ + L +K D+ ++ + + G + S + Sbjct: 56 ANTSFSIVLNKVL----ADKYKDKVDTKDIDKDIKKEEKQYGGKDQFESMLKQQ-----G 106 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 Q K + K + EI + LI+ S L Sbjct: 107 MSLDDYKEQKKLSAYQKQLLLDKVNVSDKEIK-----ENSKKTSHILIKVKSKSSDKEGL 161 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-L 250 ++ +K K +E K +K + G Y+++ + F+ Sbjct: 162 SDKKAKEKAEKIQKEVEKNPNKFGEIAKKESMDSSSAKKDGSLGYVIKGQMVDSFEKALF 221 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH---EAEYVKK 307 K + + T G I + K+ + + K++K + K+ Sbjct: 222 KLKEGEVSKVVKTDYGYHIIKAD---KETDFNSEKSNIKQKLIEEKVQKKPKLLTDAYKE 278 Query: 308 LRSNAIIHY 316 L + Y Sbjct: 279 LLKEYKVDY 287 >gi|114776940|ref|ZP_01451983.1| peptidyl-prolyl cis-trans isomerase C [Mariprofundus ferrooxydans PV-1] gi|114553026|gb|EAU55457.1| peptidyl-prolyl cis-trans isomerase C [Mariprofundus ferrooxydans PV-1] Length = 100 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 24/77 (31%), Gaps = 1/77 (1%) Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTT 258 + + + K ++ G E + +F +++ ++ + Sbjct: 22 AQCEALKAEIEAGADFAELARKHSTCPSASKGGDLGEFRERQMVKEFNDVVFSAELHTVH 81 Query: 259 NPYVTQKGVEYIAICDK 275 P TQ G I I + Sbjct: 82 GPVKTQFGYHLIEITAR 98 >gi|15606037|ref|NP_213414.1| hypothetical protein aq_592 [Aquifex aeolicus VF5] gi|2983223|gb|AAC06821.1| hypothetical protein aq_592 [Aquifex aeolicus VF5] Length = 437 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 39/331 (11%), Positives = 98/331 (29%), Gaps = 21/331 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT----DGDI 56 M + + ++T + +F + + K + T+ E IT ++ Sbjct: 1 MFGLIQKHKRIAVIIVTLASLSFLFWMFSVSDVKQMLTGNPCVATVGDECITLREYRFEL 60 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNT 113 K L+ ++ ++A+ LI + + + ++ G V Sbjct: 61 LKYSNFLQDERTEKLARRVALNSLITKEVLYLKAKELGWYVSDEEVVEVIKNDENFKEKG 120 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 S E + L++ G+ +++ + + V+ Y + + + Sbjct: 121 KFSVEKYRETLNRFGLTPAEYEEIVRKSLMAQRVLNFLREGVYVLPDELDIQKRFYSLRV 180 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC----NKLEKFASKIHDV 229 + YLI+ + + + + EK ++ Sbjct: 181 EGKLYLIKPSDVKVDYEPSEEEIKEYYEKNKEKFKEEEKEVVYVWSLKDKEKVKEYYENL 240 Query: 230 SIGKAQ----YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE---- 281 G E+ + + + +Q N + + K + G + Sbjct: 241 KKGSIPSGYTEFNENLPPKVKEAVKELNQENRIKVVRVGENYYLLYYKGKENAGYKPLEE 300 Query: 282 --IALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 +K L A+ K+++ E K L+ Sbjct: 301 VKEEIKKELVAKKQREKLKEFAQEVFKNLKE 331 Score = 35.8 bits (80), Expect = 8.5, Method: Composition-based stats. Identities = 14/119 (11%), Positives = 38/119 (31%), Gaps = 1/119 (0%) Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN- 256 +K+ + +E + K+ + ++ K S + + + Q L Sbjct: 311 AKKQREKLKEFAQEVFKNLKEGKEVGVKPLAFSSASLEEIQRILMVEQKDLLNLVFGKEK 370 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 PY + G + + +++ + + + K +V+KL + Sbjct: 371 VYGPYPSLAGYGILVVKNRKFEELKPEQVKEIERELKDNKFNDLAGLFVEKLIKEYGVK 429 >gi|86144485|ref|ZP_01062817.1| peptidyl-prolyl cis-trans isomerase [Vibrio sp. MED222] gi|218676075|ref|YP_002394894.1| Peptidyl-prolyl cis-trans isomerase C [Vibrio splendidus LGP32] gi|85837384|gb|EAQ55496.1| peptidyl-prolyl cis-trans isomerase [Vibrio sp. MED222] gi|218324343|emb|CAV25695.1| Peptidyl-prolyl cis-trans isomerase C [Vibrio splendidus LGP32] Length = 92 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 24/75 (32%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 ++ +D + K +K ++ G + + PQF + + Sbjct: 15 KELAEDIMTQLKKGAKFQTLAKKHSTCPSGKKGGDLGEFKKGQMVPQFDKICFSGETLVP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G + + Sbjct: 75 HLVKTKFGWHVVKVL 89 >gi|119386937|ref|YP_917992.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paracoccus denitrificans PD1222] gi|119377532|gb|ABL72296.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paracoccus denitrificans PD1222] Length = 267 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 16/127 (12%), Positives = 40/127 (31%), Gaps = 2/127 (1%) Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + E R + ++++ + G L D P+F + Sbjct: 130 DTSARTEARARAEAVLAELRAEPRRFAELAARYSACSSKTAGGMLGQLTSGDTVPEFDAV 189 Query: 250 LKKSQNNTTNPYVTQKGVEYIAIC--DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 L + T+ G+ I + + ++ ++ L + + +Y+ Sbjct: 190 LATMEEGALALAETRYGLHVIRLDARARGEVLPFESVLPQLRQAHDKAAWLRASRDYLDG 249 Query: 308 LRSNAII 314 L + A I Sbjct: 250 LVAGAEI 256 >gi|304410941|ref|ZP_07392558.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS183] gi|307304888|ref|ZP_07584638.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica BA175] gi|304350838|gb|EFM15239.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS183] gi|306912290|gb|EFN42714.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica BA175] Length = 92 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 25/75 (33%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + ++F+S G + + PQF + + Sbjct: 15 KEQAEDIVKQLNNGANFSVLAKRFSSCPSAKKGGDLGEFKKGQMVPQFDKVAFSGELLVP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G + + Sbjct: 75 HIVKTKFGWHVVKVL 89 >gi|73662267|ref|YP_301048.1| peptidyl-prolyl cis trans isomerase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494782|dbj|BAE18103.1| peptidyl-prolyl cis trans isomerase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 330 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 88/309 (28%), Gaps = 30/309 (9%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 K + + + + + I ++ G+V + + + ++I Sbjct: 4 FKKVLLPVTASALLLGACGNSATDSKEDTIISSKAGDV----KVEDVMNKMGDEQIANTS 59 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 I + +L+ + K ++ ++ + + G + S ++ Sbjct: 60 FSIMLNKLLADKYK--------DDVNTKDIDKEVEKEQKQYGGKDQFESMLKQQKMS--- 108 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 Q K K + EI LI+ L Sbjct: 109 --IGDYKEQKKLQAYQKELLNDKVSMSDKEIK-----ENTKKGSHILIKVKENKDDKEGL 161 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-L 250 ++ K K +E K +K + K G Y+++ + +F+ Sbjct: 162 SDKEAKAKAEKIQKEVEKHPDKFGEIAKKESMDKASAKKDGSLGYVVKGQMEDKFEKALF 221 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE---KHEAEYVKK 307 K + ++ T G I K L AQ TKI+ K + K+ Sbjct: 222 KLKEGKVSDVVKTDYGYHIIKAD---KENDFDKEKGKLKAQLIQTKIQKDPKLLTDAYKE 278 Query: 308 LRSNAIIHY 316 L + Y Sbjct: 279 LLDEYKVDY 287 >gi|289809592|ref|ZP_06540221.1| peptidyl-prolyl cis-trans isomerase C [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 72 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 19/65 (29%), Gaps = 1/65 (1%) Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIA 271 +K + G + + P F + + T P TQ G I Sbjct: 8 GDFEKLAKKHSICPSGKKGGHLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFGYHIIK 67 Query: 272 ICDKR 276 + ++ Sbjct: 68 VLYRK 72 >gi|304413823|ref|ZP_07395240.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Candidatus Regiella insecticola LSR1] gi|304283543|gb|EFL91938.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Candidatus Regiella insecticola LSR1] Length = 623 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 33/362 (9%), Positives = 90/362 (24%), Gaps = 86/362 (23%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQKING----------------ELEKIAVQEL 80 ++ +NGE I+ + + + + +L + +++L Sbjct: 35 GGANDYAAKVNGEKISQAKLEQAFQSERARMQQQLGEQFSTLASNESYMSKLRQQTLEQL 94 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN-------- 132 I L Q +K G+T V Q + D + +L+ Sbjct: 95 INNVLLNQYTQKLGLTVSDEQVKESIRQIPYFQTDNKFDNTKYLNLINSMGYKPDQFAQL 154 Query: 133 ----------------------HFKQYLAIQSIWPDVVK------NDFMLKYGNLEMEIP 164 + A + V+ N E+ Sbjct: 155 QLQQLILQQLLQAVGSSEFILPMEMKKTAELVLQQRDVRLATIDVNALQAHQKVTNTELK 214 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR------------- 211 + K + I+ + ++Q + V ++ ++ + + Sbjct: 215 NYYHQNKKDFIAPAEIKISYIFMDMAEIQKKITVSEKEIESYYQQHKNNYIQPERKHFSV 274 Query: 212 ------------------LPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK 252 ++ + I + G +L S + + Sbjct: 275 IQLKTEKEAQAILAELKTGADFATLAKQKSVDIISRKNGGTLGWLEASMTLDELKQANLT 334 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + ++ + G + + D + ++ L + K +++ + Sbjct: 335 EKGQLSDVIKSSVGYLIVRLNDIKPEQSRAFKEVRTELLKKVQQEKTLDAYYALQQQVST 394 Query: 311 NA 312 A Sbjct: 395 AA 396 >gi|195611718|gb|ACG27689.1| isomerase [Zea mays] Length = 306 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 10/98 (10%), Positives = 28/98 (28%), Gaps = 1/98 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 + + + + + G ++ + P+F+ + N T+ Sbjct: 120 KNIIAEGADLSDLAVEHSLCPSKENGGMLGWVRRGQMVPEFEEAAFSAPLNKVVRCKTKF 179 Query: 266 GVEYIAICDKRDLGGEIALK-AYLSAQNTPTKIEKHEA 302 G + + +RD + L A+ + Sbjct: 180 GWHLVQVLAERDQCVLQDIDPEQLHAKLQDPSFLEEAQ 217 >gi|167628081|ref|YP_001678581.1| parvulin-like peptidyl-prolyl isomerase domain-containing protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167598082|gb|ABZ88080.1| parvulin-like peptidyl-prolyl isomerase domain protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 92 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 9/71 (12%), Positives = 21/71 (29%), Gaps = 1/71 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQ 264 ++ +K + G + + P+F + + + P TQ Sbjct: 21 KDISEGKITFEEAAKKHSLCPSGARGGDLGTFSQGQMVPEFDKVVFNDELHKVHGPVQTQ 80 Query: 265 KGVEYIAICDK 275 G + I + Sbjct: 81 FGYHLLEITSR 91 >gi|120609364|ref|YP_969042.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli AAC00-1] gi|120587828|gb|ABM31268.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli AAC00-1] Length = 303 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 16/180 (8%), Positives = 51/180 (28%), Gaps = 6/180 (3%) Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF--SIPDNKLQNQG 196 A Q+I + + + + +R VL+ + + + + Sbjct: 108 ATQAIEALLEQALAVPDPSEDACRRHYEAHTARYRDGERVHLRHVLYAVTPGVDVQRLRE 167 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQ 254 + + + ++++ G +L D P+F + + Sbjct: 168 RAEAELLQLRCAHDGGEAFARAARQWSNCPTGAEGGDLGWLARGDCAPEFAREVFGAQEV 227 Query: 255 NNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 ++ G+ + + + G ++ ++ +Y++ L A Sbjct: 228 GVLPRLVHSRFGLHVVEVVARDAGRQRGYGEVREAVALALRQQSWVNALRQYLQVLAGEA 287 >gi|1574034|gb|AAC22665.1| peptidyl-prolyl cis-trans isomerse, putative [Haemophilus influenzae Rd KW20] Length = 594 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 37/352 (10%), Positives = 90/352 (25%), Gaps = 83/352 (23%) Query: 44 TTINGEVITDGDISKRIAL---LKLQKING-------------ELEKIAVQELIVETLKK 87 +NGEVI+ D R ++ Q+ L + V +I + L + Sbjct: 16 AKVNGEVISQQDFLNRYNQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLR 75 Query: 88 QEIEKSGITFDSNTVNYFF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 Q +++ + + + L + + + + L Sbjct: 76 QYVKELKLGVSDEMIKRAIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPL 135 Query: 145 PDVVK---------------------------------NDFMLKYGNLEMEIPANKQKMK 171 + D M K + EI + + Sbjct: 136 EQIQNGVANSEFIVPAQVKNSAEVFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQ 195 Query: 172 NITVREYLIRTVL----------------------------FSIPDNKLQNQGFVQKRIK 203 V+ ++ + + Q ++ K Sbjct: 196 KSFVQPEQVKVQYIDLSADNISRNLQVTDVEIAQYYQDNKAQFMTQHLAHIQFANEQDAK 255 Query: 204 DAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPY 261 A E + + + + KI + G ++ E++L F++ + P Sbjct: 256 VAYEELQKGANFADVAKAKSLDKISGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPI 315 Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + +++ +KA ++ + +E K+ A Sbjct: 316 NVDGNYHIVLVQERK-AQSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 366 >gi|164686191|ref|ZP_02210221.1| hypothetical protein CLOBAR_02629 [Clostridium bartlettii DSM 16795] gi|164601793|gb|EDQ95258.1| hypothetical protein CLOBAR_02629 [Clostridium bartlettii DSM 16795] Length = 198 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 21/191 (10%), Positives = 57/191 (29%), Gaps = 8/191 (4%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + K+ + + Q I +++ ++ +Y N+ + N + ++ + Sbjct: 1 MKKEYFEKFNLTEEKLKQRIKKELMGAKYLEEYSNVSEDEARNYFEKNKNDYKQIRASHI 60 Query: 184 LFSIPDNKLQN-----QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 L S D+ + + +K ++ + L ++++ G Y Sbjct: 61 LISNYDSNNKEVSDDKKEENKKTAEEVLKLALDGEDFATLAKEYSDDSSASKGGDLGYFT 120 Query: 239 ESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 + ++ F + T G I ++D + + TK Sbjct: 121 QDEMVSAFSKAAFSLKTGEIYNKVVETSSGYHIIKKTGEKDQDFDDVKDDLIK-TLESTK 179 Query: 297 IEKHEAEYVKK 307 + K Sbjct: 180 QSTLMQDLYTK 190 >gi|150011009|gb|ABR57161.1| foldase protein precursor [Staphylococcus xylosus] Length = 329 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 90/309 (29%), Gaps = 30/309 (9%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + + + + + I ++ G+V + + + ++I Sbjct: 4 LKKVILPVTASALLLGACGNSATDSKEDTIISSKAGDV----KVEDVMNKIGDEQIANSS 59 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 I + +L+ + K ++ ++ + + G + S ++ Sbjct: 60 FSILLNKLLADKYK--------DEVNTKDIDKEVEKEQKQYGGKDQFESMLKQQKMSLG- 110 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 Q K K + EI LI+ L Sbjct: 111 ----DYKEQKKLQAYQKELLNDKVDISDKEIK-----KDTKKGSHILIKVKENKDDKEGL 161 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-L 250 ++ K K ++ K +K + K G Y+++ + +F+ Sbjct: 162 SDKDAKAKAEKIQKQVEKDPDKFGEIAKKESMDKSSGKKDGSLGYVIKGQMEDKFEKALF 221 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH---EAEYVKK 307 K + N ++ T G I K L +Q +K++K + K+ Sbjct: 222 KLKEGNISDVVKTDYGYHIIKAD---KQDDFDKEKGKLKSQLIQSKVQKEPKLLTDAYKE 278 Query: 308 LRSNAIIHY 316 L + Y Sbjct: 279 LLDEYKVDY 287 >gi|319639214|ref|ZP_07993965.1| hypothetical protein HMPREF0604_01589 [Neisseria mucosa C102] gi|317399398|gb|EFV80068.1| hypothetical protein HMPREF0604_01589 [Neisseria mucosa C102] Length = 290 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 27/304 (8%), Positives = 72/304 (23%), Gaps = 20/304 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + TYF + + + + T+NG+ I I ++A ++ N + Sbjct: 1 MKKTYFASALMLALTSGTLFAQT-----LVTVNGQAIDSSVIDDQVASVRASNPNIQDTP 55 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 Q L + + + + + D + + Sbjct: 56 ELRQMLTERQVISTVVTQEAKKLKLDQSAE----FKAALEQARADAAKQGADKKPTFKTE 111 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + + + A + + + + ++ Q Sbjct: 112 WAAFENDLLGQAFAAHIIRQFPVQEKDVKAAYNDFSNFYKGTQEVQLGEIVTDSNSNAQK 171 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 K + D + V + + P ++ + + Sbjct: 172 AIADLDAKKSFVSVLNQYSIDEAAKKAGGIPKAYVPLKDL----QESAPPLYEAVKDLKK 227 Query: 255 NNTTN-PYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 T P + D+R+ + A K + + ++ + Sbjct: 228 GAHTKTPLQNGNLYAVFYVNDRRNVTVPSYEASKNEIGSDLQGARVNAAIQSLL----KK 283 Query: 312 AIIH 315 A I Sbjct: 284 ASIK 287 >gi|282875776|ref|ZP_06284643.1| PPIC-type PPIASE domain protein [Staphylococcus epidermidis SK135] gi|281294801|gb|EFA87328.1| PPIC-type PPIASE domain protein [Staphylococcus epidermidis SK135] gi|329724902|gb|EGG61405.1| PPIC-type PPIASE domain protein [Staphylococcus epidermidis VCU144] Length = 325 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 94/309 (30%), Gaps = 27/309 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +KL+ V + + + + S A S+ + +I+ ++A + + ++ Sbjct: 1 MKLMNKIIVPVTASALLLGACGSNATESK-----DNTLISSKAGDVKVADVMKKMGKEQI 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + ++ + L +K D+ ++ + + G + S + Sbjct: 56 ANTSFSIVLNKVL----ADKYKDKVDTKDIDKDIKKEEKQYGGKDQFESMLKQQ-----G 106 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 Q K + K + EI + LI+ S L Sbjct: 107 MSLDDYKEQKKLSAYQKQLLLDKVNVSDKEIK-----ENSKKASHILIKVKSKSSDKEGL 161 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-L 250 ++ +K K +E K +K + G Y+++ + F+ Sbjct: 162 SDKKAKEKAEKIQKEVEKNPNKFGEIAKKESMDSSSAKKDGSLGYVIKGQMVDSFEKALF 221 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH---EAEYVKK 307 K + + T G I + K+ + + K++K + K+ Sbjct: 222 KLKEGEVSKVVKTDYGYHIIKAD---KETDFNSEKSNIKQKLIEEKVQKKPKLLTDAYKE 278 Query: 308 LRSNAIIHY 316 L + Y Sbjct: 279 LLKEYKVDY 287 >gi|213018605|ref|ZP_03334413.1| hypothetical protein C1A_378 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995556|gb|EEB56196.1| hypothetical protein C1A_378 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 365 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 85/245 (34%), Gaps = 28/245 (11%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQK-----INGELEKIAVQELIVETLKKQEIE 91 A I +NGE I++ DI +RI + E++ +++LI E + E + Sbjct: 8 ATEIEIVADVNGEPISNLDIERRINFINSLLGTQKINQKEVKSQILRQLIDEIIIVSEAQ 67 Query: 92 KSGITFDSNTVNYFFVQHARN-TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 K I + +N L A++ ++ K I N K+ + Q +W +++ Sbjct: 68 KMNIELSNEELNNAVTLFLTQSLKLKADEVDQYVKKHNIDLNTLKKQIKCQLLWNKIIEV 127 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + E+ +++ + ++ + + ++ Sbjct: 128 GVVPLINISDQEVDDARKQKEKSDYLITFQEFIIPDQKIAEDLVKKLRTSNNPESSIKMS 187 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 + + ++L+ GK + +LE ++ P +G I Sbjct: 188 KATVNLSQLK-----------GKLKDVLEG-----------LEISDVAGPVSLSEGYSVI 225 Query: 271 AICDK 275 + DK Sbjct: 226 KVIDK 230 >gi|125605671|gb|EAZ44707.1| hypothetical protein OsJ_29333 [Oryza sativa Japonica Group] Length = 162 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 7/60 (11%), Positives = 23/60 (38%), Gaps = 1/60 (1%) Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277 ++++ G + + FQ++ + T+ P+ + G +I +++ Sbjct: 103 AQEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTPVGATSAPFKSTHGYHFILCEGRKN 162 >gi|260774240|ref|ZP_05883155.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio metschnikovii CIP 69.14] gi|260611201|gb|EEX36405.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio metschnikovii CIP 69.14] Length = 92 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 23/77 (29%), Gaps = 4/77 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ + + + K +K++ G + + P F Q Sbjct: 15 KEQADELLQQLKKGAKFQTLAKKYSLCPSGKRGGDLGEFRQGQMVPAFDKA--CFQGEIL 72 Query: 259 NP--YVTQKGVEYIAIC 273 P T+ G I + Sbjct: 73 TPQLVKTKFGWHVIKVL 89 >gi|226329062|ref|ZP_03804580.1| hypothetical protein PROPEN_02965 [Proteus penneri ATCC 35198] gi|225202248|gb|EEG84602.1| hypothetical protein PROPEN_02965 [Proteus penneri ATCC 35198] Length = 276 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 21/238 (8%), Positives = 69/238 (28%), Gaps = 19/238 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + ++ ++ + +++ F + + Y + + +NG I+ + + Sbjct: 1 MMDNIRSTANNPFIKILLAVIILSFVLTGVGGYLFSSGVND-AAEVNGYKISRSQLEQAY 59 Query: 61 ALLKLQKINGE----------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + Q + + A+ LI + L Q +K GI+ + Sbjct: 60 QQRRAQLQQDMGENFAALASSEEGQKLIRQQALDLLINQALLDQFAQKLGISAGDQQIRD 119 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 D ++D + + + I +++ + + Sbjct: 120 AIFALPYFQTNGKFDNKKYVDLLKGNNIDADAF--AEGIRQNLINQQLKFSIQGTDFALD 177 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + ++ + ++ +R I + ++ E++ + Sbjct: 178 SEVKEFAGLMLQSRNVRLASLDIQPFLEKETASDEEVKAFYEQNNQMFIAPEQFKISY 235 >gi|254367995|ref|ZP_04984015.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. holarctica 257] gi|134253805|gb|EBA52899.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp. holarctica 257] Length = 92 Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 21/75 (28%), Gaps = 1/75 (1%) Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNP 260 + ++ K + G + + P+F + + + P Sbjct: 17 QQIKKDITEGKITFEEAARKHSLCPSGARGGDLGTFSQGQMVPEFDRVVFNDELHKVHGP 76 Query: 261 YVTQKGVEYIAICDK 275 TQ G + I + Sbjct: 77 VQTQFGYHLLEITSR 91 >gi|296232841|ref|XP_002761761.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1-like isoform 2 [Callithrix jacchus] Length = 174 Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 57 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 116 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 117 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 >gi|194213203|ref|XP_001493704.2| PREDICTED: similar to protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 [Equus caballus] Length = 236 Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 130 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 189 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 190 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 232 >gi|149242227|pdb|2ITK|A Chain A, Human Pin1 Bound To D-Peptide gi|151567939|pdb|2Q5A|A Chain A, Human Pin1 Bound To L-Peptide gi|281500875|pdb|3KAB|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1 Inhibitors gi|281500880|pdb|3KAG|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1 Inhibitors gi|281500881|pdb|3KAH|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1 Inhibitors gi|281500882|pdb|3KAI|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1 Inhibitors gi|281500890|pdb|3KCE|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1 Inhibitors gi|310689927|pdb|3ODK|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors By Structure-Guided Fragment Evolution gi|317455036|pdb|2XP3|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors By Structure-Guided Fragment Evolution gi|317455037|pdb|2XP4|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors By Structure-Guided Fragment Evolution gi|317455038|pdb|2XP5|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors By Structure-Guided Fragment Evolution gi|317455040|pdb|2XP7|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors By Structure-Guided Fragment Evolution gi|317455041|pdb|2XP8|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors By Structure-Guided Fragment Evolution gi|317455042|pdb|2XP9|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors By Structure-Guided Fragment Evolution gi|317455043|pdb|2XPA|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors By Structure-Guided Fragment Evolution gi|317455044|pdb|2XPB|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors By Structure-Guided Fragment Evolution Length = 167 Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 61 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 120 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 121 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 163 >gi|118089325|ref|XP_420136.2| PREDICTED: similar to Protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Gallus gallus] Length = 125 Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 23/83 (27%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 R +A E + +++ G ++ + FQ Sbjct: 44 RAMEAMEKLKAGVRFSEVASQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSSMDK 102 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 103 PVYTDPPVKTKFGYHIIMVEGRK 125 >gi|114675259|ref|XP_001161914.1| PREDICTED: similar to Chain B, Structural Basis For The Phosphoserine-Proline Recognition By Group Iv Ww Domains isoform 1 [Pan troglodytes] gi|119604464|gb|EAW84058.1| protein (peptidylprolyl cis/trans isomerase) NIMA-interacting 1, isoform CRA_b [Homo sapiens] Length = 174 Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 57 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 116 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 117 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 >gi|10120798|pdb|1F8A|B Chain B, Structural Basis For The Phosphoserine-Proline Recognition By Group Iv Ww Domains Length = 167 Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 61 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 120 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 121 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 163 >gi|281500876|pdb|3KAC|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1 Inhibitors gi|281500877|pdb|3KAC|B Chain B, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1 Inhibitors Length = 123 Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 17 CSHLLVKHSQSRRPSSWRQEQITRTQEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 76 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 77 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 119 >gi|253700225|ref|YP_003021414.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21] gi|251775075|gb|ACT17656.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21] Length = 93 Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 20/80 (25%), Gaps = 1/80 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 ++ + + + + G+ + +F + + Sbjct: 12 ATEQECVALKTKIEAGADFGDCARENSLCPSGNQGGRLGEFRPGQMVREFDEVVFSGEVG 71 Query: 256 NTTNPYVTQKGVEYIAICDK 275 P TQ G I I + Sbjct: 72 KVLGPVKTQFGYHLIEIMSR 91 >gi|146416499|ref|XP_001484219.1| hypothetical protein PGUG_03600 [Meyerozyma guilliermondii ATCC 6260] Length = 175 Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 14/162 (8%), Positives = 38/162 (23%), Gaps = 5/162 (3%) Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 T + + + + + F + +I + + Sbjct: 15 SRTHNKEYFLNQATRELSWEPPFGTDKSKLDAYISQYKERGFKP-VVPSDGKIRTSHFLV 73 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 K+ R I + + +K ++ K E + Sbjct: 74 KHKDSRRPRSWKSPDGISLTRDEAIAIAKK---YRQQIVNGDKKLSELAEHESDCSSHSQ 130 Query: 231 IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIA 271 G + + + P F+ ++ + G+ I Sbjct: 131 GGDLGFFGKGQMQPSFEEAAFGLHVGEISDLVESDSGIHIIQ 172 >gi|61228635|sp|P0A3Y9|NIFM_KLEPN RecName: Full=Protein nifM gi|61228636|sp|P0A3Z0|NIFM_KLEOX RecName: Full=Protein nifM gi|43835|emb|CAA31679.1| unnamed protein product [Klebsiella pneumoniae] gi|43886|emb|CAA29313.1| nifM (AA 1-266) [Klebsiella pneumoniae] gi|149250|gb|AAA25105.1| nifM [Klebsiella pneumoniae] gi|225920|prf||1403297C nifM gene Length = 266 Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 13/166 (7%), Positives = 48/166 (28%), Gaps = 3/166 (1%) Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 ++ D + ++ R + + Q+ + Sbjct: 92 ELAFADIARQAPQPDLSTVQAWYLRHQTQFMRPEQRLTRHLLLTVDNDREAVHQRILGLY 151 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 + ++ + + G+ ++ L+PQ + L ++N + P ++ Sbjct: 152 RQINASRDAFAPLAQRHSHCPSALEEGRLGWISRGLLYPQLETALFSLAENALSLPIASE 211 Query: 265 KGVEYIAICDKRDLGGEIALK--AYLSAQNTPTKIEKHEAEYVKKL 308 G + R + ++H+ ++++++ Sbjct: 212 LGWHLLWCEAIRPAAPMEPQQALESARDYLWQQSQQRHQRQWLEQM 257 >gi|242023877|ref|XP_002432357.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting, putative [Pediculus humanus corporis] gi|212517780|gb|EEB19619.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting, putative [Pediculus humanus corporis] Length = 160 Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 11/104 (10%), Positives = 25/104 (24%), Gaps = 1/104 (0%) Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 Q + E R + ++ E+ ++++ Sbjct: 53 QCSHLLVKHENSRRPSSWREEKITRSKSEALELLKSYREQIVSGAASFAELAQQYSDCSS 112 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 G + + F+ + + P T GV I Sbjct: 113 AKRGGDLGPFGKGAMQKPFEQVAFALKVGELSEPVDTDSGVHII 156 >gi|169335547|ref|ZP_02862740.1| hypothetical protein ANASTE_01962 [Anaerofustis stercorihominis DSM 17244] gi|169258285|gb|EDS72251.1| hypothetical protein ANASTE_01962 [Anaerofustis stercorihominis DSM 17244] Length = 504 Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 19/261 (7%), Positives = 68/261 (26%), Gaps = 12/261 (4%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 + ++ K Q++ + ++ K+ K ++ + Sbjct: 218 SSESEQKTDEQKQQELKESTVAMVKEKAAFYAAGKEAKTKIDTKKVNSKKAENESLSSMF 277 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + +++A ++ + ++ + + K Sbjct: 278 GSDTLTSVYNAYGLTKKQYDEAGKWIATADLYKEALEEKVTYDKPTEKDAEKEFNKNTKA 337 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + +L S + ++ D ++ + K+ E Sbjct: 338 YDKSTVSAKHILTSDKSLAKEIYEQATQKGADFDQIMSKYQKNSAVQEAS---------- 387 Query: 233 KAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSA 290 + F + + + P T+ G I + DK + K + + Sbjct: 388 DLGAFTYPSMVEDFSKAAFDAEKGSVVGPVKTEYGYHVIYVYDKNTVEPKFEDSKDTILS 447 Query: 291 QNTPTKIEKHEAEYVKKLRSN 311 + + + + ++ Sbjct: 448 KLDSQNKLEAVNKLDEDIKDK 468 >gi|109131190|ref|XP_001092957.1| PREDICTED: hypothetical protein LOC699273 isoform 2 [Macaca mulatta] Length = 164 Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E + +++ G ++ + FQ Sbjct: 83 KIMEAMEKLKSGMRFNEVASQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDK 141 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 142 PVFTDPPVKTKFGYHIIMVEGRK 164 >gi|61358821|gb|AAX41625.1| protein NIMA-interacting 1 [synthetic construct] Length = 163 Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 57 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 116 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 117 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 >gi|22597180|gb|AAN03477.1| prolyl isomerase Ess1 [Cryptococcus neoformans var. neoformans] Length = 178 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 9/92 (9%), Positives = 22/92 (23%), Gaps = 1/92 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 R V +I ++ Q + + + G + Sbjct: 83 WRNVRITITSDEAQAIIEQHIAYLQSLPPADLPKEFAKIASTESDCSSARKGGDLGWFGR 142 Query: 240 SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270 + F++ + + T G+ I Sbjct: 143 GQMQKPFEDATFNTPVGQLSGIVKTDSGIHVI 174 >gi|256599529|pdb|2ZQV|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl Cis-Trans Isomerase Length = 163 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 57 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 116 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 117 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 >gi|145347174|ref|XP_001418050.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578278|gb|ABO96343.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 106 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 11/96 (11%), Positives = 27/96 (28%), Gaps = 1/96 (1%) Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + ++ + + + D K E+ ++ G+ + Sbjct: 10 HVLVKDRARAEALKAEIEADVAGGAPLRAKFARVAEQHSTCPSAKKGGELGAFKPGQMVK 69 Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 +F + P TQ G I + D+ + Sbjct: 70 EFDAVVFSGEIGAVLGPVDTQFGSHLILVTDREEAK 105 >gi|281421755|ref|ZP_06252754.1| chaperone SurA [Prevotella copri DSM 18205] gi|281404250|gb|EFB34930.1| chaperone SurA [Prevotella copri DSM 18205] Length = 328 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 19/154 (12%), Positives = 54/154 (35%), Gaps = 5/154 (3%) Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + ++ ++ +L + Q V++RI ++ + + Sbjct: 89 KRYDDVEPCELMPDKGSVHVAHILLRLGQKASYREQEVVERRIDSIYQALCKGADFADLA 148 Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277 +K + V+ G + + F+ + + + P++++ G + + DK D Sbjct: 149 KKCSDDKGSAVNGGTLAWFTKGQTVQAFEKVAFSLRKGEISRPFMSEFGYHIVKLLDKHD 208 Query: 278 LGGEIALKAYLSAQNTP---TKIEKHEAEYVKKL 308 G + A +N + E+ E + ++ Sbjct: 209 DGNQKKYVADAKVENWRGTYQQQEEVENLLLNEI 242 >gi|309806668|ref|ZP_07700664.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LactinV 03V1-b] gi|312870840|ref|ZP_07730945.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LEAF 3008A-a] gi|308166973|gb|EFO69156.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LactinV 03V1-b] gi|311093530|gb|EFQ51869.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LEAF 3008A-a] Length = 297 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 33/294 (11%), Positives = 78/294 (26%), Gaps = 41/294 (13%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 F K L T ++ F V + + S+ G IT D ++ Sbjct: 3 FKKSLKTLLLIAAFSGVALTATGC----SKTVANYKGGKITQEDFYNKVK-------KSP 51 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + + +I+ +Q+ NT + + + + + + Sbjct: 52 AGQAILANMIINRTLQQQYGSQVSKKKVNTAYD----------NARKQYGARFEMVLQQN 101 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + +++ + + + ++ +L Sbjct: 102 GMTPEAYKESIQTNLLLQAALKDIKPITKAQEKKAW----KEYQPKVRVQHIL------- 150 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD---LHPQFQ 247 + K E + + +K+++ + GK + SD + Sbjct: 151 ----VEKEDTAKKVIEELGKGASFKDLAKKYSTDTGTSKNAGKIEPFDSSDTTLDADFKE 206 Query: 248 NLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 K T P TQ G I + G + K+ + A+ + Sbjct: 207 AAFKLKTGEYTKKPVKTQFGYHIIKMIKHPSKGSFQSHKSEIIARIYQKMAQDQ 260 >gi|17537235|ref|NP_496824.1| hypothetical protein Y48C3A.16 [Caenorhabditis elegans] gi|5832912|emb|CAB55116.1| C. elegans protein Y48C3A.16, confirmed by transcript evidence [Caenorhabditis elegans] Length = 126 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q + +A E K +++ S G ++ + FQ+ N+ Sbjct: 41 EKQGKALEAIEKLKSGMKFNEVAAQYSED-KARSGGDLGWMTRGSMVGPFQDAAFALSNS 99 Query: 257 -------TTNPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 100 SCDKPIYTDPPVKTKFGYHVIMVEGKK 126 >gi|254284437|ref|ZP_04959405.1| PPIC-type PPIASE domain protein [gamma proteobacterium NOR51-B] gi|219680640|gb|EED36989.1| PPIC-type PPIASE domain protein [gamma proteobacterium NOR51-B] Length = 294 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 22/284 (7%), Positives = 73/284 (25%), Gaps = 31/284 (10%) Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETL 85 ++ I++ + A + G + + +I L L + V+ Sbjct: 8 FLLLIMAMSASADEAAPVFNAGGVTVKESEI-----RYLLGNTAEALRERIVES------ 56 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + + R ++ K + + Sbjct: 57 ----------PEERQAFIEKLLAQKRLAEMADNVVGEVGSKDYWELQYDLIRVRQAFTIA 106 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + + + E ++ + + + +L ++ + ++KD Sbjct: 107 KFKEGLTVPDMSVIAREEYMARKNDIAVVPEKRKVAHILL--TCEPGCDREAKKAQLKDF 164 Query: 206 EESRLRLPKDCNKLEKFASK-IHDVSIGKAQY---LLESDLHPQFQNLLK--KSQNNTTN 259 S K + ++++ + G+ + ++ F+ ++ + + Sbjct: 165 SASIAEGAKFADLAKQYSEDFASARNGGRLGTAIAKDDGNIAFAFRKASFALENPGDLSP 224 Query: 260 PYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHE 301 P T G I + + L+ + + Sbjct: 225 PVETLFGYHLIVLEEIEPSYTVPFERLRDQIVQLLEREWTNEQV 268 >gi|242001848|ref|XP_002435567.1| rotamase, putative [Ixodes scapularis] gi|215498903|gb|EEC08397.1| rotamase, putative [Ixodes scapularis] Length = 132 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 26/87 (29%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q ++ +A E K ++ G ++ + FQ+ + Sbjct: 47 EKQSKVLEALEKIKGGMKFNEAAATYSED-KARQGGDLGWMTRGSMVGPFQDAAFALPIS 105 Query: 257 TT-------NPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 106 TLANPVYTDPPVKTKFGYHIIMVEGKK 132 >gi|256599528|pdb|2ZQU|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl Cis-Trans Isomerase Length = 163 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 57 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 116 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 117 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 >gi|317009325|gb|ADU79905.1| hypothetical protein HPIN_03345 [Helicobacter pylori India7] Length = 411 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 80/272 (29%), Gaps = 31/272 (11%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 +NG IT I + Q+ + + A LI E +K QEIE+ I D + ++ Sbjct: 163 VNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDDKLDQE 216 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 A+ G+ + F L +G ++ L ++++N + E Sbjct: 217 MAMMAQQQGMDLDHFKQMLMAEGHYKL-YRDQLKEHLEMQELLRNILLTNVDTSS-ETKM 274 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + K+ ++ + + Sbjct: 275 REYYNKHKEQFSIPTEIETVRYTSTNQEDLERAMSNPNLEVPGVSKANEKIE-------- 326 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY---IAICDKRDLGGEI 282 +++ Q + Q + T G I ++ Sbjct: 327 ------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQFITFYIKEKKGKNEVSFS 374 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K +++ + +K E+ +KLR + I Sbjct: 375 QAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 406 >gi|114051057|ref|NP_001040140.1| peptidyl-prolyl cis-trans isomerase [Bombyx mori] gi|87248189|gb|ABD36147.1| peptidyl-prolyl cis-trans isomerase [Bombyx mori] Length = 135 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 26/87 (29%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK----- 251 Q + +A E K + ++ G ++ + FQ+ Sbjct: 50 EKQSKCLEALEKLKAGQKFPDVAAAYSED-KARQGGDLGWMTRGSMVGPFQDAAFALPIS 108 Query: 252 --KSQNNTTNPYVTQKGVEYIAICDKR 276 + T P T+ G I + K+ Sbjct: 109 SVTNPVYTNPPVKTKLGYHIIMVEGKK 135 >gi|125981737|ref|XP_001354872.1| GA14299 [Drosophila pseudoobscura pseudoobscura] gi|195167040|ref|XP_002024342.1| GL14862 [Drosophila persimilis] gi|54643184|gb|EAL31928.1| GA14299 [Drosophila pseudoobscura pseudoobscura] gi|194107715|gb|EDW29758.1| GL14862 [Drosophila persimilis] gi|225581071|gb|ACN94647.1| GA14299 [Drosophila miranda] Length = 163 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 12/122 (9%), Positives = 29/122 (23%), Gaps = 1/122 (0%) Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + K G+ + PA Q + + + R + + + Sbjct: 39 EIAKKSGSNAADGPAEVQCLHLLVKHKGSRRPSSWREQHITRTKEEAQLLLEVYRNKIVQ 98 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269 + ++ G + P F+ + + T G+ Sbjct: 99 QETTFEELARSYSDCSSAKRGGDLGKFGRGQMQPPFEKAAFALNVGQLSGIVDTDSGLHI 158 Query: 270 IA 271 I Sbjct: 159 IQ 160 >gi|332253263|ref|XP_003275765.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1-like [Nomascus leucogenys] Length = 163 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 57 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 116 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 117 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 >gi|225436662|ref|XP_002276538.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296083867|emb|CBI24255.3| unnamed protein product [Vitis vinifera] Length = 296 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 8/73 (10%), Positives = 26/73 (35%) Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273 + +++ G ++ + + P+F+ K+ N T+ G + + Sbjct: 118 DLSDLAVEYSICPSKEEGGMLGWVRKGQMVPEFEEAAFKAPLNKVVRCKTKFGWHLLQVI 177 Query: 274 DKRDLGGEIALKA 286 +R+ ++ Sbjct: 178 SEREESLLQDIQP 190 >gi|77736211|ref|NP_001029804.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Bos taurus] gi|75060706|sp|Q5BIN5|PIN1_BOVIN RecName: Full=Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1; AltName: Full=Peptidyl-prolyl cis-trans isomerase Pin1; Short=PPIase Pin1; AltName: Full=Rotamase Pin1 gi|60650278|gb|AAX31371.1| protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 [Bos taurus] gi|86827588|gb|AAI12584.1| Peptidylprolyl cis/trans isomerase, NIMA-interacting 1 [Bos taurus] gi|296485898|gb|DAA28013.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Bos taurus] Length = 163 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 57 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 116 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 117 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 >gi|300985812|ref|ZP_07177604.1| PPIC-type PPIASE domain protein [Escherichia coli MS 45-1] gi|300407963|gb|EFJ91501.1| PPIC-type PPIASE domain protein [Escherichia coli MS 45-1] Length = 93 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 20/78 (25%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E +K + G + + P F + + Sbjct: 13 KEEKLALDLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 T TQ G I + Sbjct: 73 EPTGSLHTQFGYHIIKVL 90 >gi|256599538|pdb|2ZR5|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl Cis-Trans Isomerase Length = 163 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 8/91 (8%), Positives = 24/91 (26%), Gaps = 1/91 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + ++ ++ + + +F+ + G Sbjct: 69 RPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRG 128 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + F++ + P T G+ I Sbjct: 129 QMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 >gi|147815086|emb|CAN74567.1| hypothetical protein VITISV_015712 [Vitis vinifera] Length = 241 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 7/73 (9%), Positives = 25/73 (34%) Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273 + +++ G ++ + + P+F+ + N T+ G + + Sbjct: 118 DLSDLAVEYSICPSKEEGGMLGWVRKGQMVPEFEEAAFXAPLNKVVRCKTKFGWHLLQVI 177 Query: 274 DKRDLGGEIALKA 286 +R+ ++ Sbjct: 178 SEREESLLQDIQP 190 >gi|256599539|pdb|2ZR6|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl Cis-Trans Isomerase Length = 163 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 57 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 116 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 117 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 >gi|150025240|ref|YP_001296066.1| peptidyl-prolyl cis-trans isomerase precursor [Flavobacterium psychrophilum JIP02/86] gi|149771781|emb|CAL43255.1| Probable peptidyl-prolyl cis-trans isomerase precursor [Flavobacterium psychrophilum JIP02/86] Length = 658 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 15/124 (12%), Positives = 34/124 (27%), Gaps = 5/124 (4%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF---QNLLK 251 + I+D + + +F+ G L + Sbjct: 253 EKAKATIQDIYTKLKQGENFESLASQFSQDKNSAPKGGLLPRFASGQLSSEEFENAAFAL 312 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT-PTKIEKHEAEYVKKLRS 310 N + P+ +Q G + + +K+ + ++ L + + KLR Sbjct: 313 TKPNEYSAPFESQFGWHIVKLVEKQPIKKLNEMEKELDEKIRKDDRSRLITNSLTNKLRK 372 Query: 311 NAII 314 I Sbjct: 373 KYTI 376 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/240 (10%), Positives = 62/240 (25%), Gaps = 12/240 (5%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I + + + + V + + ++K + Sbjct: 31 IDDKPYYTDEFSRVYNKNIDLVKDESQKDLNKYMELFVGYKLKINKANKIGLQNNEKYIN 90 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + + ++ ++ ++ + + Sbjct: 91 ELKSYRTQLSK--NYTSDTKVTKALIEEGYNRSLKEIRASHILITVDENAVPADTLKAYN 148 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT 258 + D + L K + F+ + G Y + F+ + + + Sbjct: 149 QAIDIRKKALVGEKFEDLAVTFSQDPSSKENKGDLGYFSAFRMIYPFETVAYNTKKGQIS 208 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYL--------SAQNTPTKIEKHEAEYVKKLRS 310 P T+ G I I D R+ GEI + + S T K + + KL+ Sbjct: 209 MPVRTKFGYHLIYITDSRENRGEITVAHIMILKSPKAESEITTTEKAKATIQDIYTKLKQ 268 >gi|119503317|ref|ZP_01625401.1| peptidyl-prolyl cis-trans isomerase D [marine gamma proteobacterium HTCC2080] gi|119460963|gb|EAW42054.1| peptidyl-prolyl cis-trans isomerase D [marine gamma proteobacterium HTCC2080] Length = 624 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 19/166 (11%), Positives = 54/166 (32%), Gaps = 6/166 (3%) Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 ++DF+ + ++ + + + + LI +L ++ +R+ DA Sbjct: 237 RDDFLAPVDQVALQEQFDSIQDEYTVAEQTLIAHILLIQ--GDDESVEAYTRRVDDAASR 294 Query: 209 RLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKG 266 + + + + G+ + + ++ + + + T G Sbjct: 295 IAADEDFADLAAELSDDVGSAALGGELGFTDGTVFPEAMESAVNSLAVGEVSAGVKTDAG 354 Query: 267 VEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 +I I ++ + LK L + ++ V +LR Sbjct: 355 THFIRILERVAGETPDYEQLKNELEKSMQEAEADQTLLVTVDELRE 400 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 45/154 (29%), Gaps = 14/154 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + +++ F + + + +NG IT ++ I Sbjct: 1 MMQSIRAGTQNTGFKILIFLIILSFAGFGLEQVIFGSSGTS-VAEVNGTEITPQELQVAI 59 Query: 61 ALLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 K Q + + A++ELI TL Q ++ + S + Sbjct: 60 EGQKRQLMQIFGDNIDPEMLDDDRIRPRALEELIERTLLLQAATENAMVASSRAIGEIVG 119 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 A D + +++ Q Sbjct: 120 SIDVFKVDGAFDADQYKVVLANAGYTPERFRREQ 153 >gi|319401108|gb|EFV89327.1| PPIC-type PPIASE domain protein [Staphylococcus epidermidis FRI909] Length = 326 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 94/309 (30%), Gaps = 27/309 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +KL+ V + + + + S A S+ + +I+ ++A + + ++ Sbjct: 1 MKLMNKIIVPVTASALLLGACGSNATESK-----DNTLISSKAGDVKVADVMKKMGKEQI 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + ++ + L +K D+ ++ + + G + S + Sbjct: 56 ANTSFSIVLNKIL----ADKYKDKVDTKDIDKDIKKEEKQYGGKDQFESMLKQQ-----G 106 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 Q K + K + EI + LI+ S L Sbjct: 107 MSLDDYKEQKKLSAYQKQLLLDKVNVSDKEIK-----ENSKKASHILIKVKSKSSDKEGL 161 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-L 250 ++ +K K +E K +K + G Y+++ + F+ Sbjct: 162 SDKKAKEKAEKIQKEVEKNPNKFREIAKKESMDSSSAKKDGSLGYVIKGQMVDSFEKALF 221 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH---EAEYVKK 307 K + + T G I + K+ + + K++K + K+ Sbjct: 222 KLKEGEVSKVVKTDYGYHIIKAD---KETDFNSEKSNIKQKLIEEKVQKKPKLLTDAYKE 278 Query: 308 LRSNAIIHY 316 L + Y Sbjct: 279 LLKEYKVDY 287 >gi|291407685|ref|XP_002720151.1| PREDICTED: protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)-like [Oryctolagus cuniculus] Length = 131 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E K +++ G ++ + FQ Sbjct: 50 KIMEAMEKLKSGMKFSEVAAQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDK 108 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 109 PVFTDPPVKTKFGYHIIMVEGRK 131 >gi|123476934|ref|XP_001321637.1| PPIC-type PPIASE domain containing protein [Trichomonas vaginalis G3] gi|121904467|gb|EAY09414.1| PPIC-type PPIASE domain containing protein [Trichomonas vaginalis G3] Length = 154 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 12/133 (9%), Positives = 32/133 (24%), Gaps = 11/133 (8%) Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ----------GFV 198 + + N I T + VL + + Sbjct: 18 QVYYYNSVTNESTWIRPVPFPGDKNTAEWPPMVYVLHILIKHNQSEHPNPALKRTREEAQ 77 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNT 257 + + K + + + G ++ + P+F+ + Sbjct: 78 NIINEIHQILLTDNKKFESIAKDRSDCESAKFNGVLGWIARKKMPPEFEKVAWGLGIGQI 137 Query: 258 TNPYVTQKGVEYI 270 + P+ T +G + Sbjct: 138 SKPFETVEGFHIV 150 >gi|30584149|gb|AAP36323.1| Homo sapiens protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [synthetic construct] Length = 132 Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E + +++ G ++ + FQ Sbjct: 50 KIMEAMEKLKSGMRFNEVAAQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDK 108 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 109 PVFTDPPVKTKFGYHIIMVEGRK 131 >gi|24373397|ref|NP_717440.1| peptidyl-prolyl cis-trans isomerase C [Shewanella oneidensis MR-1] gi|24347669|gb|AAN54884.1|AE015627_2 peptidyl-prolyl cis-trans isomerase C [Shewanella oneidensis MR-1] Length = 92 Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 24/78 (30%), Gaps = 1/78 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 + + + ++ L +S G+ + +F ++ + N Sbjct: 14 EDQCQALKQQILDGADFAQIARAHSSCPSGAQGGELGSFGPGMMVREFDEVVFSAPLNVV 73 Query: 259 -NPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 74 QGPVKTQFGYHLLEVTSR 91 >gi|301058980|ref|ZP_07199949.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300446976|gb|EFK10772.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 824 Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 15/159 (9%), Positives = 41/159 (25%), Gaps = 4/159 (2%) Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + I+ N + E+ + + + ++++ Sbjct: 658 QERLWADIERRLQSYRSKRAFCSPRNPKTEVESTHLSKLKTEEKNRHLWHGSGKKSESRV 717 Query: 193 QNQGFVQKRIKDAEESRLRLPK---DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + K A+E L + +++ G Y+ D+ + + Sbjct: 718 RISIISVKEQPIAQEILRELKAGGNFSELVRRYSIGPGAEHGGDIGYIAPGDMVEDLRAV 777 Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 + T G I D+R + + Sbjct: 778 AMNLKVGQYSGTVETGNGYFIIMKTDERSSPQTLPEETQ 816 >gi|114564788|ref|YP_752302.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella frigidimarina NCIMB 400] gi|114336081|gb|ABI73463.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella frigidimarina NCIMB 400] Length = 92 Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 20/72 (27%), Gaps = 4/72 (5%) Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--Y 261 D + K +K +S S G + + P F + P Sbjct: 20 DIIKQLNNGAKFDVLAKKHSSCPSAKSGGNLGEFKKGQMVPPFDKV--CFNGELITPHLV 77 Query: 262 VTQKGVEYIAIC 273 T+ G + + Sbjct: 78 KTKFGWHVVKVL 89 >gi|299822144|ref|ZP_07054030.1| peptidyl-prolyl cis-trans isomerase [Listeria grayi DSM 20601] gi|299815673|gb|EFI82911.1| peptidyl-prolyl cis-trans isomerase [Listeria grayi DSM 20601] Length = 287 Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 20/256 (7%), Positives = 66/256 (25%), Gaps = 20/256 (7%) Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + L + ++ + + + + + + Sbjct: 29 KSDQGDVTKDELYDALKDKDGEQVLQLLTFNKILDDKYKVSDKEVDKKYNAAKAQYGDQF 88 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 N ++ + + + + ++ + + +++ Sbjct: 89 ASALQQANLTEKMYKLSLKNELLRQKATKAYIKVTDKKLQDYYKTWQPKITVSHIL---- 144 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLH 243 +K E+ K + +K+++ GK + Sbjct: 145 -----------VADKKTADKVEQELKDGKKFADLAKKYSTDTASKTKGGKLDAFGTGQMD 193 Query: 244 PQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--K 299 P F+ K + + + P +Q G I + + KA + +++ + Sbjct: 194 PAFEKAAYALKEKGDISKPVKSQFGYHVIQLDEPAKKATFEKDKAQVKKDYIDSQMNNAE 253 Query: 300 HEAEYVKKLRSNAIIH 315 +KK +A + Sbjct: 254 VVQAALKKEFKDANVK 269 >gi|225575736|ref|ZP_03784346.1| hypothetical protein RUMHYD_03829 [Blautia hydrogenotrophica DSM 10507] gi|225037049|gb|EEG47295.1| hypothetical protein RUMHYD_03829 [Blautia hydrogenotrophica DSM 10507] Length = 419 Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 34/335 (10%), Positives = 86/335 (25%), Gaps = 41/335 (12%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------- 69 L + ++ + T++ E I+ G +S + Q Sbjct: 44 IIVAALTGAIALSGLAGCGQLDGGKTVATVDKEEISMGVLSFMTRYQQAQTAQMYMSMLG 103 Query: 70 --------------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 L A+++L L K ++ +T Sbjct: 104 SDPSSMWDQVEDEKKGTTYGDSLRDDALEQLEEMCLLKIHADEYEVTVTKEEQEKIQRAA 163 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM-------- 161 + ++E+ S L F + + +K D + + E Sbjct: 164 KQFMEDNSEEVKSELVVSQKDVERFLELTTYYQKMQEPIKADADMNVTDEEAAQTTVTYT 223 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 ++ + +E + + + + D + + +D + L + Sbjct: 224 KVDPPDTEATTDEEKEDSGQEEKDAKTKAQEILDQVLATEDADMDAIAKSVDEDLSALSE 283 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLG 279 S +L + +K Q+ ++ + + D Sbjct: 284 SFSTNEAEEEEDETDTSTGNLPDAVKEAVKGLQDGEVVSSLIQDGDSYYVVRLDSAFDQE 343 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + + ++ + V++ R A I Sbjct: 344 ATENQKDSI----ISERKQELYDDTVEEWRDKADI 374 >gi|5453898|ref|NP_006212.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Homo sapiens] gi|114675261|ref|XP_001161990.1| PREDICTED: hypothetical protein LOC745021 isoform 2 [Pan troglodytes] gi|296232839|ref|XP_002761760.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1-like isoform 1 [Callithrix jacchus] gi|297703517|ref|XP_002828684.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1-like [Pongo abelii] gi|3024406|sp|Q13526|PIN1_HUMAN RecName: Full=Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1; AltName: Full=Peptidyl-prolyl cis-trans isomerase Pin1; Short=PPIase Pin1; AltName: Full=Rotamase Pin1 gi|3891861|pdb|1PIN|A Chain A, Pin1 Peptidyl-Prolyl Cis-Trans Isomerase From Homo Sapiens gi|34810641|pdb|1NMV|A Chain A, Solution Structure Of Human Pin1 gi|1332710|gb|AAC50492.1| Pin1 [Homo sapiens] gi|12804093|gb|AAH02899.1| Peptidylprolyl cis/trans isomerase, NIMA-interacting 1 [Homo sapiens] gi|47115245|emb|CAG28582.1| UBL5 [Homo sapiens] gi|54695532|gb|AAV38138.1| protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 [Homo sapiens] gi|61358816|gb|AAX41624.1| protein NIMA-interacting 1 [synthetic construct] gi|119604463|gb|EAW84057.1| protein (peptidylprolyl cis/trans isomerase) NIMA-interacting 1, isoform CRA_a [Homo sapiens] gi|123990187|gb|ABM83904.1| protein (peptidylprolyl cis/trans isomerase) NIMA-interacting 1 [synthetic construct] gi|123999297|gb|ABM87225.1| protein (peptidylprolyl cis/trans isomerase) NIMA-interacting 1 [synthetic construct] gi|158255584|dbj|BAF83763.1| unnamed protein product [Homo sapiens] gi|168279071|dbj|BAG11415.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [synthetic construct] gi|1589005|prf||2209428A peptidyl-Pro isomerase Length = 163 Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 57 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 116 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 117 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 >gi|325922613|ref|ZP_08184364.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas gardneri ATCC 19865] gi|325546908|gb|EGD18011.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas gardneri ATCC 19865] Length = 292 Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 18/191 (9%), Positives = 48/191 (25%), Gaps = 12/191 (6%) Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 Q + A +I V+ ++ A + L + Sbjct: 91 QDDPVVAARIRQATDAILAKAVQARTRENAHIDAAQVQAQFNAHPHDYDEVRLSHVFVAL 150 Query: 187 IPDNKLQ-----NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLES 240 P + + R + + ++ + G+ + Sbjct: 151 QPQGDARRGTPLSDAQALARAQQLKRQLDSGTPFEEVAKRESDDGSTAAEGGELSSIFLR 210 Query: 241 DLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 ++ F ++ + P +G I + D R + + Q ++ Sbjct: 211 NVADVFAAPVQALGVGEVSAPVRGPEGYHLIRV-DARVPATLETARGQIEVQLR----DQ 265 Query: 300 HEAEYVKKLRS 310 +++LR Sbjct: 266 AATAALERLRQ 276 >gi|153004697|ref|YP_001379022.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. Fw109-5] gi|152028270|gb|ABS26038.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. Fw109-5] Length = 584 Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 36/270 (13%), Positives = 75/270 (27%), Gaps = 44/270 (16%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 T+ EVIT D+ + A+ + G K +L+ + + I + + Sbjct: 72 VATVADEVITVDDLRELAAITHQDRAEGMTGKADFTKLVERLVAVRTIVAEARAIGLDDL 131 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 A N + I D+V+ E Sbjct: 132 EEVKKPIADN---------------------------KERIRFDLVRKHASKDVTVDPAE 164 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + + K + + +K Sbjct: 165 VKRLYDEARRE---------------WRIRSVFFGQEAEAKKFTAALAAGGEFDALAKKA 209 Query: 223 ASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 A S +Q++ S++ + + K + T P G + + +KR + + Sbjct: 210 AEDKVARSGEGSQWIRVSEIQVSVAKEVEKLAPGKATAPLKAGPGWTVVRLDEKRSVE-D 268 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 AL+A + + + K Y KL+ Sbjct: 269 EALRAKIESTVRGEAVAKALQAYYAKLKKQ 298 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 33/327 (10%), Positives = 91/327 (27%), Gaps = 46/327 (14%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTING-EVITDGDISKRI 60 + L + + T + + P +++ R+ + G + +T G++++ + Sbjct: 288 LQAYYAKLKKQLVRIDTKLLRAVSFDKPKGGFEALRKDRRVVARVEGAKPVTLGEVAESL 347 Query: 61 AL--------LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 A + Q + ++ A+ L+ + L E E+ + Sbjct: 348 ARPLFHGVAPAQEQGKLDKQKQDALDALVSKRLVTIEAERLRLDDTPEAKRRA------- 400 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 ++ + + + E E A +K K+ Sbjct: 401 -----------------------AEFETNLLFTTFIDRVVIPEVKVTEAEDRAAYEKRKD 437 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 R + D K + + + E+ ++ Sbjct: 438 EFKYPAFYRLEGLAFQDAKNAQKALKSLQGGTDFKWLRSNSDGLVPEEEQVFRLDATQ-- 495 Query: 233 KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSA 290 + + +F+ L +Q+ ++ + + ++ + Sbjct: 496 ---TISARAMPEEFRKALAGAQDGDVRLVASKDQHYVVRVAQFTPESVRPFEEVRPEIHK 552 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHYY 317 T I + +V+KLR ++ Y Sbjct: 553 DVFGTAIARALDGWVEKLRDAHEVNVY 579 >gi|297710312|ref|XP_002831846.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like isoform 1 [Pongo abelii] gi|332263759|ref|XP_003280920.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like isoform 1 [Nomascus leucogenys] gi|20139299|sp|Q9Y237|PIN4_HUMAN RecName: Full=Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4; AltName: Full=Parvulin-14; Short=Par14; Short=hPar14; AltName: Full=Parvulin-17; Short=Par17; Short=hPar17; AltName: Full=Peptidyl-prolyl cis-trans isomerase Pin4; Short=PPIase Pin4; AltName: Full=Peptidyl-prolyl cis/trans isomerase EPVH; Short=hEPVH; AltName: Full=Rotamase Pin4 gi|4689436|gb|AAD27893.1|AF143096_1 peptidyl-prolyl cis-trans isomerase EPVH [Homo sapiens] gi|5420453|dbj|BAA82320.1| parvulin [Homo sapiens] gi|57163115|emb|CAI39856.1| protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Homo sapiens] Length = 131 Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E + +++ G ++ + FQ Sbjct: 50 KIMEAMEKLKSGMRFNEVAAQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDK 108 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 109 PVFTDPPVKTKFGYHIIMVEGRK 131 >gi|15597192|ref|NP_250686.1| peptidyl-prolyl cis-trans isomerase C1 [Pseudomonas aeruginosa PAO1] gi|107101424|ref|ZP_01365342.1| hypothetical protein PaerPA_01002464 [Pseudomonas aeruginosa PACS2] gi|116049947|ref|YP_791243.1| peptidyl-prolyl cis-trans isomerase C1 [Pseudomonas aeruginosa UCBPP-PA14] gi|218892046|ref|YP_002440913.1| peptidyl-prolyl cis-trans isomerase C1 [Pseudomonas aeruginosa LESB58] gi|254235079|ref|ZP_04928402.1| peptidyl-prolyl cis-trans isomerase C1 [Pseudomonas aeruginosa C3719] gi|254240433|ref|ZP_04933755.1| peptidyl-prolyl cis-trans isomerase C1 [Pseudomonas aeruginosa 2192] gi|296389594|ref|ZP_06879069.1| peptidyl-prolyl cis-trans isomerase C1 [Pseudomonas aeruginosa PAb1] gi|313111192|ref|ZP_07797014.1| peptidyl-prolyl cis-trans isomerase C1 [Pseudomonas aeruginosa 39016] gi|9947998|gb|AAG05384.1|AE004626_3 peptidyl-prolyl cis-trans isomerase C1 [Pseudomonas aeruginosa PAO1] gi|115585168|gb|ABJ11183.1| peptidyl-prolyl cis-trans isomerase C1 [Pseudomonas aeruginosa UCBPP-PA14] gi|126167010|gb|EAZ52521.1| peptidyl-prolyl cis-trans isomerase C1 [Pseudomonas aeruginosa C3719] gi|126193811|gb|EAZ57874.1| peptidyl-prolyl cis-trans isomerase C1 [Pseudomonas aeruginosa 2192] gi|218772272|emb|CAW28054.1| peptidyl-prolyl cis-trans isomerase C1 [Pseudomonas aeruginosa LESB58] gi|310883516|gb|EFQ42110.1| peptidyl-prolyl cis-trans isomerase C1 [Pseudomonas aeruginosa 39016] Length = 92 Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 6/77 (7%), Positives = 20/77 (25%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 + ++ + +K ++ G + + N + + Sbjct: 12 KTEAEAAQLKQRLAKGEDFATLAKKHSTCPSGKRGGDLGEVRPGQMVRSIDNAIFRKPVG 71 Query: 256 NTTNPYVTQKGVEYIAI 272 P +Q G + + Sbjct: 72 VLQGPLKSQFGYHLLEV 88 >gi|327292088|ref|XP_003230752.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like, partial [Anolis carolinensis] Length = 116 Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 24/87 (27%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------L 249 Q R +A E + +++ G ++ + FQ Sbjct: 31 EKQSRALEALEKLKAGMRFSEVASQYSED-KARQGGDLGWMARGSMVGPFQEAAFALPVS 89 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 90 SMDKPVYTDPPVKTKFGYHIIMVEGRK 116 >gi|170084513|ref|XP_001873480.1| predicted protein [Laccaria bicolor S238N-H82] gi|164651032|gb|EDR15272.1| predicted protein [Laccaria bicolor S238N-H82] Length = 163 Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 8/91 (8%), Positives = 21/91 (23%), Gaps = 1/91 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + + + K K + G + Sbjct: 69 RPSSWKEENITRTKEEATEILRGHEAKINGSTDKFTELASKHSDCSSHTHGGDLGWFGRG 128 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + F++ ++ T GV + Sbjct: 129 QMQKPFEDAAYGLKVGEISDVISTDSGVHLV 159 >gi|114052054|ref|NP_001040206.1| rotamase Pin1 [Bombyx mori] gi|87248389|gb|ABD36247.1| rotamase Pin1 [Bombyx mori] Length = 169 Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 9/91 (9%), Positives = 23/91 (25%), Gaps = 1/91 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + + + R K ++ G + Sbjct: 75 RPSSWREEHITRTKEEALDILQEYRRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKG 134 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + F+++ + P T G+ I Sbjct: 135 QMQKPFEDVAFSLKIGQLSQPVHTDSGIHII 165 >gi|268532952|ref|XP_002631604.1| Hypothetical protein CBG20785 [Caenorhabditis briggsae] gi|187023057|emb|CAP37736.1| hypothetical protein CBG_20785 [Caenorhabditis briggsae AF16] Length = 120 Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q + +A E K +++ S G ++ + FQ+ N+ Sbjct: 35 EKQGKALEAIEKLKSGMKFNEVAAQYSED-KARSGGDLGWMTRGSMVGPFQDAAFALSNS 93 Query: 257 -------TTNPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 94 SCDKPIYTDPPVKTKFGYHVIMVEGKK 120 >gi|256599537|pdb|2ZR4|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl Cis-Trans Isomerase Length = 163 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 57 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 116 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 117 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 >gi|110591318|pdb|2F21|A Chain A, Human Pin1 Fip Mutant Length = 162 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 56 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 115 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 116 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 158 >gi|321477932|gb|EFX88890.1| hypothetical protein DAPPUDRAFT_191361 [Daphnia pulex] Length = 158 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 11/106 (10%), Positives = 25/106 (23%), Gaps = 1/106 (0%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 Q + R + + + + + + E+ K++ Sbjct: 49 KVQCSHLLVKHRDSRRPSSWRQDNITISKEEAMDLLVGYQEQIINGEASFAELASKYSDC 108 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 G + F++ + P T GV I Sbjct: 109 SSAKKGGDLGSFGRGAMQKPFEDAAFSLKVGGMSEPVWTDSGVHII 154 >gi|259501419|ref|ZP_05744321.1| peptidylprolyl isomerase PrsA1 [Lactobacillus iners DSM 13335] gi|302190860|ref|ZP_07267114.1| peptidylprolyl isomerase [Lactobacillus iners AB-1] gi|309805385|ref|ZP_07699434.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LactinV 09V1-c] gi|312875036|ref|ZP_07735054.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LEAF 2053A-b] gi|315653171|ref|ZP_07906096.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus iners ATCC 55195] gi|325911618|ref|ZP_08174026.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners UPII 143-D] gi|259167168|gb|EEW51663.1| peptidylprolyl isomerase PrsA1 [Lactobacillus iners DSM 13335] gi|308165312|gb|EFO67546.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LactinV 09V1-c] gi|311089431|gb|EFQ47857.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LEAF 2053A-b] gi|315489536|gb|EFU79173.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus iners ATCC 55195] gi|325476604|gb|EGC79762.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners UPII 143-D] Length = 297 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 33/294 (11%), Positives = 78/294 (26%), Gaps = 41/294 (13%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 F K L T ++ F V + + S+ G IT D ++ Sbjct: 3 FKKSLKTLLLIAAFSGVALTATGC----SKTVANYKGGKITQEDFYNKVK-------KSP 51 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + + +I+ +Q+ NT + + + + + + Sbjct: 52 AGQAILANMIINKTLQQQYGSQVSKKKVNTAYD----------NARKQYGARFEMVLQQN 101 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + +++ + + + ++ +L Sbjct: 102 GMTPEAYKESIQTNLLLQAALKDIKPITKAQEKKAW----KEYQPKVRVQHIL------- 150 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD---LHPQFQ 247 + K E + + +K+++ + GK + SD + Sbjct: 151 ----VEKEDTAKKVIEELGKGASFKDLAKKYSTDTGTSKNAGKIEPFDSSDTTLDADFKE 206 Query: 248 NLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 K T P TQ G I + G + K+ + A+ + Sbjct: 207 AAFKLKTGEYTKKPVKTQFGYHIIKMIKHPSKGSFQSHKSEIIARIYQKMAQDQ 260 >gi|301780252|ref|XP_002925543.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like [Ailuropoda melanoleuca] Length = 131 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-------KS 253 +I +A E + +++ G ++ + FQ Sbjct: 50 KIMEAMEKLKSGMRFSEVATQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGLDK 108 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 109 PVFTDPPVKTKFGYHIIMVEGKK 131 >gi|315924902|ref|ZP_07921119.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315621801|gb|EFV01765.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 509 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 31/295 (10%), Positives = 76/295 (25%), Gaps = 23/295 (7%) Query: 40 SRIRTTINGEVITDGDISKRI-------------ALLKLQKINGELEKIAVQELIVETLK 86 + T++ + +T G+ A + + + + + Sbjct: 190 DKSVGTVDKKKVTHGEYYYYYVGKVLSTYASTGSAPATDRATQKRINQSVFKTIGTYRGM 249 Query: 87 KQEIEKSGITFDSNTV--NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 Q + I S+ V + + + + + Sbjct: 250 IQYCKDHHIKISSDAVAAQQKLLNMTLKMYFPKDSTLDSYLQNYGMTAAIFRKYQKEEAK 309 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 + ++ + Q +K + L + K+I Sbjct: 310 GRAAQAAIRSAL---AKDVKVSNQDVKEYYESHESTYNPKTVSACHILTKDPVLAKKIAK 366 Query: 205 AEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPY 261 + + K+++K + + + P F + S+N P Sbjct: 367 EAKGIKTKAAFKKLMRKYSTKTNKKVLESMDLGAFKSARMVPAFSKAAFNASKNTAVGPV 426 Query: 262 VTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHEAEYVKKLRS-NAII 314 T G I + DK KA ++ + +K + +K L+ A + Sbjct: 427 KTTNGYHVIFVYDKTQKKDSWKNHKAAITQSIQQNESKKAYQKQIKDLQDVKADV 481 >gi|308480673|ref|XP_003102543.1| hypothetical protein CRE_04023 [Caenorhabditis remanei] gi|308261275|gb|EFP05228.1| hypothetical protein CRE_04023 [Caenorhabditis remanei] Length = 119 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q + +A E K +++ S G ++ + FQ+ N+ Sbjct: 34 EKQGKALEAIEKLKAGMKFNEVASQYSED-KARSGGDLGWMTRGSMVGPFQDAAFALSNS 92 Query: 257 -------TTNPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 93 SCDKPIYTDPPVKTKFGYHVIMVEGKK 119 >gi|42523892|ref|NP_969272.1| hypothetical protein Bd2456 [Bdellovibrio bacteriovorus HD100] gi|39576099|emb|CAE80265.1| unnamed protein product [Bdellovibrio bacteriovorus HD100] Length = 345 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 93/336 (27%), Gaps = 27/336 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ ++ F II V +N +I+ D + Sbjct: 5 MADKMKRGINAKSVTAMVIFGAIIMVFVFFGMPGQMGAGVGSVARVNNTLISLADFQQEE 64 Query: 61 ALLKLQKIN------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF-- 106 ++ N L + A++ L+ L Q +KSGI V F Sbjct: 65 NRIQQYYQNLFGNQMDFGSQRQLLRQQALENLVRMELVSQAAQKSGILATDAEVRDFIVK 124 Query: 107 -VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + + G+ +DF +Q + + I + F L +E+ Sbjct: 125 DIPFFQQNGMFQKDFYMRYIEQTRTTPANFEDKVRKDISNVRTRALFELATQPTAVELKK 184 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + ++ + S K + IK +E+ ++ + + K Sbjct: 185 ---IQDLRAAKINVLFVKIDSEAATKALTKEKADAAIKALDEALVKGDEAAVNAQLKELK 241 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN-------PYVTQKGVEYIAICDKRDL 278 G L ++ ++ + + + + + Sbjct: 242 ATWEETG-LVELGSETFPKITSSVATEAVFELSKTEPLLKRLVRDGNSKYVLKLKESKVE 300 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + L+ + + + ++ RS + + Sbjct: 301 EVK-TLEPMSAEMMQKRRGDGMFEAWINMFRSKSHV 335 >gi|221128893|ref|XP_002155754.1| PREDICTED: similar to Y48C3A.16 [Hydra magnipapillata] Length = 141 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q + +A + + +++ S G +++ + FQ+ Q + Sbjct: 56 EKQGKCLEAMALLKAGKRFSDVATQYSED-KARSGGDLGWMVRGSMVGPFQDAAFALQPS 114 Query: 257 TT-------NPYVTQKGVEYIAICDKR 276 T P T G I I K+ Sbjct: 115 TVDNPIYTDPPVKTNFGYHIIMIEGKK 141 >gi|261378345|ref|ZP_05982918.1| conserved hypothetical protein [Neisseria cinerea ATCC 14685] gi|269145451|gb|EEZ71869.1| conserved hypothetical protein [Neisseria cinerea ATCC 14685] Length = 288 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 85/305 (27%), Gaps = 25/305 (8%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71 + + + + S + T+NG+ I I ++A + + E Sbjct: 1 MKAKILTSVAMLACSGSLFAQT-----LATVNGQKIDSSVIDAQVAAFRAENSRAEDSPR 55 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L + ++ +V T+ QE+++ + + + HA + SF + Sbjct: 56 LRQALLKNEVVNTVVAQEVKRLKLDQSAEFKDTLAKLHAEAKKSGDDKKPSFKTVWSAVE 115 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + E + A + ++ Sbjct: 116 YE---------LNGRAYALHIAKTQPVSEQDAKAAYDNISGFYKGTQEVQLGEVLTDKED 166 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + + K ++ L+ ++ ++ + V + E D P +Q + Sbjct: 167 NAKKAVADLKAKKGFDAVLKQYSLNDRAKQTGAPDEYVPLKNL----EQDALPLYQAVKD 222 Query: 252 KSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + T P + D+R++ L Q + V L + Sbjct: 223 LKKGEFTAVPLKNGDFYGVYYVNDRRNVKV--PSFDELKEQIAGDLQAERIDRAVGALLN 280 Query: 311 NAIIH 315 A I Sbjct: 281 KADIK 285 >gi|110590724|pdb|1ZCN|A Chain A, Human Pin1 Ng Mutant Length = 161 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 55 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 114 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 115 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 157 >gi|309807374|ref|ZP_07701339.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LactinV 01V1-a] gi|309810061|ref|ZP_07703907.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners SPIN 2503V10-D] gi|312872215|ref|ZP_07732288.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LEAF 2062A-h1] gi|312873587|ref|ZP_07733634.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LEAF 2052A-d] gi|308169383|gb|EFO71436.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LactinV 01V1-a] gi|308169560|gb|EFO71607.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners SPIN 2503V10-D] gi|311090840|gb|EFQ49237.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LEAF 2052A-d] gi|311092299|gb|EFQ50670.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LEAF 2062A-h1] Length = 297 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 32/294 (10%), Positives = 77/294 (26%), Gaps = 41/294 (13%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 F K L T ++ F V + + S+ G IT D ++ Sbjct: 3 FKKSLKTLLLIAAFSGVALTATGC----SKTVANYKGGKITQEDFYNKVK-------KSP 51 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + + +I+ +Q+ NT + + + + + + Sbjct: 52 AGQAILANMIINRTLQQQYGSQVSKKKVNTAYD----------NARKQYGARFEMVLQQN 101 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + +++ + + + ++ +L Sbjct: 102 GMTPEAYKESIQTNLLLQAALKDIKPITKAQEKKAW----KEYQPKVRVQHIL------- 150 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD---LHPQFQ 247 + K E + + +K+++ + GK + SD + Sbjct: 151 ----VEKEDTAKKVIEELGKGASFKDLAKKYSTDTGTSKNAGKIEPFDSSDTTLDADFKE 206 Query: 248 NLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 K T P TQ G I + G + K+ + + + Sbjct: 207 AAFKLKTGEYTKKPVKTQFGYHIIKMIKHPSKGSFQSHKSEIITRIYQKMAQDQ 260 >gi|168011406|ref|XP_001758394.1| predicted protein [Physcomitrella patens subsp. patens] gi|162690429|gb|EDQ76796.1| predicted protein [Physcomitrella patens subsp. patens] Length = 119 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 7/76 (9%), Positives = 19/76 (25%), Gaps = 1/76 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 V K ++ + + + + G + + F+ + Sbjct: 40 DAVAKLMQFKSDIESGRATLADLATQNSDCSSAKRGGDLGWFGRGQMQEPFERATFNLNV 99 Query: 255 NNTTNPYVTQKGVEYI 270 ++ T G I Sbjct: 100 GELSDIIDTDSGSHII 115 >gi|66817294|ref|XP_642500.1| hypothetical protein DDB_G0277775 [Dictyostelium discoideum AX4] gi|60470582|gb|EAL68561.1| hypothetical protein DDB_G0277775 [Dictyostelium discoideum AX4] Length = 124 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 1/81 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 + ++ +A + + + VS G Y+ D+ +F + Sbjct: 44 EKEAKLMEAVNLIKSGKTFNSVAQSHSEDKARVSSGLLGYIGRGDMVQEFTDRAFNQPIG 103 Query: 256 NTTNPYVTQKGVEYIAICDKR 276 + P+ TQ G I + DK+ Sbjct: 104 VVSEPFRTQFGYHIILVEDKK 124 >gi|259090316|pdb|3IK8|A Chain A, Structure-Based Design Of Novel Pin1 Inhibitors (I) gi|259090317|pdb|3IK8|B Chain B, Structure-Based Design Of Novel Pin1 Inhibitors (I) gi|259090318|pdb|3IKD|A Chain A, Structure-Based Design Of Novel Pin1 Inhibitors (I) gi|259090319|pdb|3IKD|B Chain B, Structure-Based Design Of Novel Pin1 Inhibitors (I) gi|259090320|pdb|3IKG|A Chain A, Structure-Based Design Of Novel Pin1 Inhibitors (I) gi|259090321|pdb|3IKG|B Chain B, Structure-Based Design Of Novel Pin1 Inhibitors (I) gi|293651898|pdb|3JYJ|A Chain A, Structure-Based Design Of Novel Pin1 Inhibitors (Ii) gi|293651899|pdb|3JYJ|B Chain B, Structure-Based Design Of Novel Pin1 Inhibitors (Ii) gi|294979472|pdb|3I6C|A Chain A, Structure-Based Design Of Novel Pin1 Inhibitors (Ii) gi|294979473|pdb|3I6C|B Chain B, Structure-Based Design Of Novel Pin1 Inhibitors (Ii) Length = 123 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 17 CSHLLVKHSQSRRPSSWRQEQITRTQEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 76 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 77 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 119 >gi|56754325|gb|AAW25350.1| SJCHGC06702 protein [Schistosoma japonicum] Length = 153 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 11/107 (10%), Positives = 23/107 (21%), Gaps = 1/107 (0%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + R + P+ + K ++ + Sbjct: 44 KVRCAHLLVKHNQSRRPSSWKQPNITRSKDEALTLIKKYKKQIETGECTFEELARTESDC 103 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 S G + + F+ K P T G+ I Sbjct: 104 SSAHSGGDLDFFSRGQMQKPFEEAAFKLKIGEMCGPVYTDSGIHLIK 150 >gi|256599526|pdb|2ZQS|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl Cis-Trans Isomerase Length = 163 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 57 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDASSA 116 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 117 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 >gi|125972872|ref|YP_001036782.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum ATCC 27405] gi|256005741|ref|ZP_05430696.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum DSM 2360] gi|281417071|ref|ZP_06248091.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum JW20] gi|125713097|gb|ABN51589.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum ATCC 27405] gi|255990314|gb|EEU00441.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum DSM 2360] gi|281408473|gb|EFB38731.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum JW20] gi|316940891|gb|ADU74925.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum DSM 1313] Length = 463 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 36/333 (10%), Positives = 93/333 (27%), Gaps = 23/333 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI----RTTINGE----VIT 52 M K T++ + +L ++ + S ++ S+ ING I Sbjct: 1 MVHKKKTAVITGVAVLVGIVIIALAVGYNYYSKRNKPQESKEFGFQALKINGTYVSTDIM 60 Query: 53 DGDISKRIALLK-----LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + +K K L+ + E + + ++I L + + +++ ++ Sbjct: 61 KEERNKFFEKYKRNADVLRMNDHERNDMLLDQVIERLLLEDYVNNKSGVTATDSEVEDYI 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + + + K + + + K L + Sbjct: 121 NRFIKPRYGDSLGTFMSSQGYTNEEEMKAGIKEYILKHKALYKAAKEKNVTLTEQELDEG 180 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI- 226 + I ++ IR + ++ + + +K + ++++ Sbjct: 181 YEKHKIQNKKVDIRHI---FISSQERGKEEAKKLADEIYNRLKNNEDFETLAKQYSDDEK 237 Query: 227 HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 S G L F N P +G E + + + + Sbjct: 238 TKESGGVITELRAGFNEAVFDNAVFTAEAGQLLEPIEVARGYEIVYVD---KVTDFYRTR 294 Query: 286 AYLSAQNTPTKIEK--HEAEYVKKLRSNAIIHY 316 + T K + E+ ++ + N I Sbjct: 295 DEYAELLTVDKFMQSDAYKEWFEEYKKNYDIEI 327 >gi|224824985|ref|ZP_03698091.1| putative peptidyl-prolyl cis-trans isomerase [Lutiella nitroferrum 2002] gi|224602656|gb|EEG08833.1| putative peptidyl-prolyl cis-trans isomerase [Lutiella nitroferrum 2002] Length = 277 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 50/150 (33%), Gaps = 7/150 (4%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 + F+ + + + F + SY A+ + I D+ + L+ Q + Sbjct: 8 NKFVIKVILGAIALTFVGFGVGSYT-TAVDEPYLAKVGNVKIHKQDLDRA---LEGQPAD 63 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDK 126 + ++ LI + L + +G+T + N SAE + FL Sbjct: 64 AATRQAVLENLIRQQLLLADAHAAGLTVSDAQLRKAIASIPALQENGAFSAERYKQFLAG 123 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 + F++ + + + + + Sbjct: 124 RYQSSVAFEELVKRDILLQGQLTSLLGSQI 153 >gi|312884158|ref|ZP_07743870.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368206|gb|EFP95746.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Vibrio caribbenthicus ATCC BAA-2122] Length = 92 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 7/75 (9%), Positives = 24/75 (32%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + + K ++ ++ G + QF + + Sbjct: 15 KEQAEDIIKQLKKGAKFQTLAKRHSTCPSGKRGGDLGEFKRGQMVAQFDKVCFSGETLVP 74 Query: 259 NPYVTQKGVEYIAIC 273 + T+ G + + Sbjct: 75 HLVKTKFGWHVVKVL 89 >gi|197302599|ref|ZP_03167654.1| hypothetical protein RUMLAC_01328 [Ruminococcus lactaris ATCC 29176] gi|197298497|gb|EDY33042.1| hypothetical protein RUMLAC_01328 [Ruminococcus lactaris ATCC 29176] Length = 368 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 28/326 (8%), Positives = 82/326 (25%), Gaps = 34/326 (10%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + F K + + + + + T+ E IT G ++ A L+ + Sbjct: 1 MVRFGKKVAVLTLAGAIAAMSV-TGCGSIKEDATVATVGEEKITLG-VANFYARLQQGQY 58 Query: 69 N--------------------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 + + ++ L L Q + ++ + Sbjct: 59 ETYYAGMMGTTGEAMWSQDASDGKDYEEQTKDNIMESLENLYLLSQHASEYNVSLSDDEK 118 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN-DFMLKYGNLEM 161 + + + + + L IQ+ +K+ + + + Sbjct: 119 KAIKDAAEQFGKDNTDQVKDVVSGSTDTIEKLLELLTIQNKMDTAIKDTETVTADDITDD 178 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 E + + ++ D++ + + D+ + + Sbjct: 179 EAAQKSMQYVLFSYTTKDDSGNSTTLSDDEKETLKTTAQNFVDSVKGGADFGTAATEAGV 238 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 A S + ++ + T T G+ + D Sbjct: 239 EAQTATFDS-----ESTSPNSDLIAAADALVNEGDVTEVIETDNGLYVAKLTSLLDREAT 293 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKK 307 + KA + + K ++ + + Sbjct: 294 DSKKASIVTERKQEKYDEVLKGWKED 319 >gi|75075274|sp|Q4R383|PIN1_MACFA RecName: Full=Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1; AltName: Full=Peptidyl-prolyl cis-trans isomerase Pin1; Short=PPIase Pin1 gi|67972184|dbj|BAE02434.1| unnamed protein product [Macaca fascicularis] Length = 163 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 57 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 116 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 117 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 >gi|119774399|ref|YP_927139.1| peptidyl-prolyl cis-trans isomerase C [Shewanella amazonensis SB2B] gi|119766899|gb|ABL99469.1| peptidyl-prolyl cis-trans isomerase C [Shewanella amazonensis SB2B] Length = 92 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 7/78 (8%), Positives = 26/78 (33%), Gaps = 1/78 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 Q++ + ++ + + ++ G+ + +F ++ + + Sbjct: 14 QEQCEVLKKLIEGGADFADIAREHSACPSGSQGGELGSFGPGMMVREFDEVVFSAPLHVV 73 Query: 259 -NPYVTQKGVEYIAICDK 275 P TQ G + + + Sbjct: 74 QGPVKTQFGYHLLEVTSR 91 >gi|260813904|ref|XP_002601656.1| hypothetical protein BRAFLDRAFT_114914 [Branchiostoma floridae] gi|229286955|gb|EEN57668.1| hypothetical protein BRAFLDRAFT_114914 [Branchiostoma floridae] Length = 151 Score = 56.2 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 8/91 (8%), Positives = 19/91 (20%), Gaps = 1/91 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + ++ + + G + Sbjct: 57 RPSSWKQDKITRTQEEALELLNDFRQRIVSGEVTLAVLAATESDCSSARKGGDLGFFGPG 116 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + F+ K + P T G+ I Sbjct: 117 QMQKPFEEATFKLKVGELSEPVFTDSGIHII 147 >gi|254503805|ref|ZP_05115956.1| hypothetical protein SADFL11_3844 [Labrenzia alexandrii DFL-11] gi|222439876|gb|EEE46555.1| hypothetical protein SADFL11_3844 [Labrenzia alexandrii DFL-11] Length = 635 Score = 56.2 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 12/207 (5%), Positives = 50/207 (24%), Gaps = 18/207 (8%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + +I L ++ F I + + + + + ++ + + Sbjct: 1 MRKGAGTWIAKLFIALLIFSFAIWGVTDFLQGYGQNT-VAKVGEKEVSLLEFDRMYRQDL 59 Query: 65 LQKINGELE-------------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 + + A+ LI + ++ + + + Sbjct: 60 NRLGQQFGRPLTPQEGASLGIPQQALARLIGQAAMSNAAQELKVGISDDRLGAIIQSDPA 119 Query: 112 NTG----LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 G L+ ++ + ++ V++ + Sbjct: 120 FQGASGRYDRSRLQQVLNANDYREDEYVVLRRQEAERGQVIEGLIGGMSAPQAYLAAFDA 179 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQN 194 + + +V I ++ ++ Sbjct: 180 FQNETRSVEYVAIAAEQIGDIEDPAED 206 >gi|152984891|ref|YP_001348658.1| peptidyl-prolyl cis-trans isomerase C1 [Pseudomonas aeruginosa PA7] gi|150960049|gb|ABR82074.1| peptidyl-prolyl cis-trans isomerase C1 [Pseudomonas aeruginosa PA7] Length = 92 Score = 56.2 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 7/77 (9%), Positives = 19/77 (24%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 + ++ R K ++ G + + N + + Sbjct: 12 KTAAEAEQLKQRLARGEDFATLARKHSTCPSGKRGGDLGEVRPGQMVRPIDNAIFRKPVG 71 Query: 256 NTTNPYVTQKGVEYIAI 272 P +Q G + + Sbjct: 72 VLQGPLKSQFGYHLLEV 88 >gi|115725323|ref|XP_790053.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115958685|ref|XP_001194858.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 113 Score = 56.2 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 29/87 (33%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + +A E + + EK++ G ++ + FQ+ Q + Sbjct: 28 EKHSKAMEALEKIKAGERFNSVAEKYSED-KARQGGDLGWMTRGSMVGPFQDAAFALQPS 86 Query: 257 TT-------NPYVTQKGVEYIAICDKR 276 +T P T+ G I I K+ Sbjct: 87 STDKPIYTDPPVKTKHGYHIIMIEGKK 113 >gi|321253954|ref|XP_003192910.1| transcriptional elongation regulator [Cryptococcus gattii WM276] gi|317459379|gb|ADV21123.1| transcriptional elongation regulator, putative [Cryptococcus gattii WM276] Length = 178 Score = 56.2 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 9/92 (9%), Positives = 22/92 (23%), Gaps = 1/92 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 R +IP ++ Q + + + G + Sbjct: 83 WRNDKITIPPDEAQAIIEKHIAYLQSLPPADVPKEFARIASTESDCSSAKKGGDLGWFGR 142 Query: 240 SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270 + F++ + + T G+ I Sbjct: 143 GQMQKPFEDATFNTPVGQLSGIVKTDSGIHVI 174 >gi|296116178|ref|ZP_06834796.1| peptidyl-prolyl cis-trans isomerase D [Gluconacetobacter hansenii ATCC 23769] gi|295977284|gb|EFG84044.1| peptidyl-prolyl cis-trans isomerase D [Gluconacetobacter hansenii ATCC 23769] Length = 639 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 32/390 (8%), Positives = 90/390 (23%), Gaps = 85/390 (21%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR--IRTTINGEVITDGDISKRIALL 63 + ++ + + F + + R + + + I + + Sbjct: 3 RIFVDSWVGRVIVGLFFLTFVGWGVGDVLMNIGTERADVVARVGPDPILVPAYEQALRTE 62 Query: 64 KLQKING---------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV- 107 Q ++ + +Q LI++ G+ + V Sbjct: 63 MPQIAQQMHLDDPSQIPAATREQIAQQVLQRLILQDEVALAARNHGLLVPDSAVRAEIFA 122 Query: 108 ---QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV--------------KN 150 +N F++ L G+ + + + + ++ + Sbjct: 123 IPAFQDKNGKFDRTTFNNRLRSSGMTEARLIELVRAEQASKALMEPIRNGAGAPDLLTRR 182 Query: 151 DFMLKYGNLEMEI--------------------PANKQKMKNITVREYLIRTVLFSIPDN 190 F L+ +++I R V+ S Sbjct: 183 IFDLEAQTRKVDIVRVPFAAQTPAAPSDAQARRFHTNHPWLFEAPEYRHARIVVLSPETV 242 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD---------VSIG--------- 232 E+ R + + + ++ G Sbjct: 243 ARSMTIPDADLHHMYEQQAQRFNTPETRSVQVITAPNEARARELLTTWQGGASWDAMQKS 302 Query: 233 --------KAQYLLESDLH--PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GG 280 + + S + + + + + P T G + Sbjct: 303 AGKDSASVEMDDIRISSIPSQELGRQIFNAPSDTVSPPIHTDGGWAIFRVLHVTPAHISD 362 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + + L AQ +++ + V+KL+ Sbjct: 363 FESARPALQAQALAERVQAQIGDRVQKLQD 392 >gi|228965301|ref|ZP_04126394.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar sotto str. T04001] gi|228794386|gb|EEM41899.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar sotto str. T04001] Length = 94 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 4/78 (5%) Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 + + K ++P T G I + DK++L +K + +++ Sbjct: 1 MKEFEEAAYKLDAGQVSDPVKTTYGYHIIKVTDKKELKPFDEVKDKIRKDLEQQRLQDTT 60 Query: 302 AEY----VKKLRSNAIIH 315 ++ V L ++A I Sbjct: 61 GKWKQQVVNDLLNDADIK 78 >gi|311248730|ref|XP_003123277.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1-like [Sus scrofa] Length = 163 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 57 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCNSA 116 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 117 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 >gi|332016995|gb|EGI57794.1| Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Acromyrmex echinatior] Length = 127 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 27/87 (31%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q +I +A E K ++ S G ++ + FQ+ + Sbjct: 42 EKQSKILEALEKLKAGQKFNEIAATYSED-KARSGGDLGWMTRGSMVGPFQDAAFALPVS 100 Query: 257 -------TTNPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 101 SLGSPVYTDPPVKTKFGYHIIMVEGKK 127 >gi|307208736|gb|EFN86013.1| Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Harpegnathos saltator] Length = 126 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 27/87 (31%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q +I +A E K ++ S G ++ + FQ+ + Sbjct: 41 EKQSKILEALEKLKAGQKFNEVAATYSED-KARSGGDLGWMTRGSMVGPFQDAAFALPIS 99 Query: 257 -------TTNPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 100 SLASPVYTDPPVKTKFGYHIIMVESKK 126 >gi|322788443|gb|EFZ14112.1| hypothetical protein SINV_03411 [Solenopsis invicta] Length = 129 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 27/87 (31%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q +I +A E K ++ S G ++ + FQ+ + Sbjct: 44 EKQSKILEALEKLKAGQKFNEVAATYSED-KARSGGDLGWMTRGSMVGPFQDAAFALPIS 102 Query: 257 -------TTNPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 103 SLASPVYTDPPVKTKFGYHIIMVEGKK 129 >gi|45361247|ref|NP_989201.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Xenopus (Silurana) tropicalis] gi|82202394|sp|Q6P4K8|PIN4_XENTR RecName: Full=Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4; AltName: Full=Parvulin-14; Short=Par14; AltName: Full=Peptidyl-prolyl cis-trans isomerase Pin4; Short=PPIase Pin4; AltName: Full=Rotamase Pin4 gi|38648988|gb|AAH63359.1| protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Xenopus (Silurana) tropicalis] Length = 127 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 25/83 (30%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 ++ +A E + +++ G ++ + FQ+ Sbjct: 46 KVMEAMEKLKSGVRFSEVATQYSED-KARQGGDLGWMTRGSMVGPFQDAAFALPVSTMDK 104 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 105 PVYTDPPVKTKFGYHIIMVEGRK 127 >gi|312113659|ref|YP_004011255.1| hypothetical protein Rvan_0880 [Rhodomicrobium vannielii ATCC 17100] gi|311218788|gb|ADP70156.1| hypothetical protein Rvan_0880 [Rhodomicrobium vannielii ATCC 17100] Length = 365 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 89/268 (33%), Gaps = 10/268 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA-- 110 + + L + G K ++ LI + LK Q ++ IT V Q A Sbjct: 99 KKQLVEEAKGRVLSEGGGTSRKQVIETLIEDKLKLQAAKRLEITVSDKEVEEVLAQRAGG 158 Query: 111 -RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 +F + GI + + Q W DV++ + + + Sbjct: 159 GDGKKPQLNEFYQQFEADGISRKTVQNIIRAQLAWRDVIRRQYGPRIAAMLA----ALPT 214 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + V ++ V +R+ +AE R + + ++ A + D Sbjct: 215 DDQKPADGDIQFDVRVLRLAVAGSDERAVSQRMMEAENLRSKFTSCADLPKR-AKLVADA 273 Query: 230 SIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 S+ + + Q L+ K S+ T P + VE AIC K + Sbjct: 274 SVKAVDKAKLASFNKDAQPLILKASEGQMTPPILVSGAVEAYAICKKGVVLKRNPAAEQ- 332 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++ Y+++L+ +A I Y Sbjct: 333 KPDARAQEYDRFSRRYLQELKKSASIDY 360 >gi|225025209|ref|ZP_03714401.1| hypothetical protein EIKCOROL_02106 [Eikenella corrodens ATCC 23834] gi|224941967|gb|EEG23176.1| hypothetical protein EIKCOROL_02106 [Eikenella corrodens ATCC 23834] Length = 288 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 29/278 (10%), Positives = 67/278 (24%), Gaps = 20/278 (7%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING-----ELEKIAVQELIVETLKKQEIEKSGITF 97 T+N I I +++ ++ Q EL + + L+ L QE + + Sbjct: 24 VVTVNNTRIDSSAIDQQVKIINEQSNGQVTDSPELRENIARRLVTRELMIQESRRLRLNE 83 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + + D + + + + +V + Sbjct: 84 SPE--------FKQIIERARTDARTSGEDRKPTFRQDWETFEGNVTAQALVAHILRSNPV 135 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 A ++ + + + + Q +R + + + D Sbjct: 136 TEAQVQQAYQEITNRYRGTQEVKLGEIILNNRDNAQKAVADLRRGRRFTDVARQYTIDTP 195 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKR 276 + E + + Q T P + + KR Sbjct: 196 SRANGGISPTFTPLKDL----EEGAPMVYNAVKSLGQGKFTETPVESNGIFAIFYMEAKR 251 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + A L Q + + +L A I Sbjct: 252 PVRV--PPFAQLKPQIQQDLQNLLIEQEIARLYQQANI 287 >gi|325913389|ref|ZP_08175756.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners UPII 60-B] gi|329919662|ref|ZP_08276640.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners SPIN 1401G] gi|325477315|gb|EGC80460.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners UPII 60-B] gi|328937314|gb|EGG33738.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners SPIN 1401G] Length = 297 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 32/294 (10%), Positives = 77/294 (26%), Gaps = 41/294 (13%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 F K L T ++ F V + + S+ G IT D ++ Sbjct: 3 FKKSLKTLLLIAAFSGVALTATGC----SKTVANYKGGKITQEDFYNKVK-------KSP 51 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + + +I+ +Q+ NT + + + + + + Sbjct: 52 AGQAILANMIINKTLQQQYGSQVSKKKVNTAYD----------NARKQYGARFEMVLQQN 101 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + +++ + + + ++ +L Sbjct: 102 GMTPEAYKESIQTNLLLQAALKDIKPITKAQEKKAW----KEYQPKVRVQHIL------- 150 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD---LHPQFQ 247 + K E + + +K+++ + GK + SD + Sbjct: 151 ----VEKEDTAKKVIEELGKGASFKDLAKKYSTDTGTSKNAGKIEPFDSSDTTLDADFKE 206 Query: 248 NLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 K T P TQ G I + G + K+ + + + Sbjct: 207 AAFKLKTGEYTKKPVKTQFGYHIIKMIKHPSKGSFQSHKSEIITRIYQKMAQDQ 260 >gi|284040908|ref|YP_003390838.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirosoma linguale DSM 74] gi|283820201|gb|ADB42039.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirosoma linguale DSM 74] Length = 133 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 2/75 (2%) Query: 208 SRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQK 265 +++ + GK + P+F Q + + S++ + P+ T+ Sbjct: 48 KLKAGYAFDKLALEYSQDYGSFTAGGKLGWQKPDIFVPEFNQVISQMSKDQFSKPFKTEF 107 Query: 266 GVEYIAICDKRDLGG 280 G + + DK+ Sbjct: 108 GYHIVQLLDKKPGEV 122 >gi|331701588|ref|YP_004398547.1| Foldase protein prsA [Lactobacillus buchneri NRRL B-30929] gi|329128931|gb|AEB73484.1| Foldase protein prsA [Lactobacillus buchneri NRRL B-30929] Length = 298 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 36/282 (12%), Positives = 80/282 (28%), Gaps = 37/282 (13%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 +I ++S+ A S+ T NG IT+ + K +Q++I+ Sbjct: 9 LIVLAGIMMSFTLAACGSKTVATTNGGKITES-------AYYSSLKSTSSGKQVLQQMIL 61 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + +++ K + VN F ++ + G S + L Sbjct: 62 NKVLEKQYGK---DVKDSQVNSEFAKYKKQYGSSFNSVL-------QQNGMTASQLKDSI 111 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 ++K + ++ + + Q + Sbjct: 112 RSNLLLKQAVKDNVKITDAQLETQFKSYQPK---------------VTVNQILVSKKSTA 156 Query: 203 KDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYL--LESDLHPQFQNLLKK-SQNNTT 258 + + +K+++ G+ + L F+ K T Sbjct: 157 EKVISELKDGKSFSSLAKKYSTDTATKNKGGRIAAFDNTNTSLDANFKKAAFKLKNGEYT 216 Query: 259 N-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 P TQ G + I + + G ++ L Q +K+ Sbjct: 217 KTPVKTQYGYQVIQMVNHPSKGTWKQHESELKDQIVTSKMSD 258 >gi|170725314|ref|YP_001759340.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella woodyi ATCC 51908] gi|169810661|gb|ACA85245.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella woodyi ATCC 51908] Length = 92 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 9/77 (11%), Positives = 23/77 (29%), Gaps = 4/77 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 ++ ++ + + K +K ++ G + + P F + Sbjct: 15 KELAEEIIQKLNKGAKFDQLAKKHSTCPSGKKGGSLGEFKKGQMVPAFDKV--CFTGELI 72 Query: 259 NP--YVTQKGVEYIAIC 273 P T+ G I + Sbjct: 73 TPHLVKTKFGWHVIKVL 89 >gi|221133455|ref|ZP_03559760.1| peptidyl-prolyl cis-trans isomerase C [Glaciecola sp. HTCC2999] Length = 92 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 22/76 (28%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN- 255 +K+ D + ++ ++ G + QF +++ K Sbjct: 12 KTEKQALDILAQIKQGKDFGKLAKQHSTCPSRKRGGDLGEFKRGQMVKQFDDVVFKKPIL 71 Query: 256 NTTNPYVTQKGVEYIA 271 P T+ G I Sbjct: 72 TVHGPVKTKFGYHLIK 87 >gi|255514246|gb|EET90507.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 91 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 24/70 (34%), Gaps = 1/70 (1%) Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPY 261 ++ + + E+++ G + + + +F++ K + T+ Sbjct: 19 QEVLDKLAKGESFAKLAEEYSIDGSRKRGGDLGFFGKGVMVREFEDAAFKLEKGQTSGIV 78 Query: 262 VTQKGVEYIA 271 TQ G I Sbjct: 79 KTQFGYHIIK 88 >gi|288958078|ref|YP_003448419.1| peptidyl-prolyl cis-trans isomerase D [Azospirillum sp. B510] gi|288910386|dbj|BAI71875.1| peptidyl-prolyl cis-trans isomerase D [Azospirillum sp. B510] Length = 626 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 30/378 (7%), Positives = 79/378 (20%), Gaps = 78/378 (20%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI----TDGDI 56 M + ++ + +++ F I I + + I D + Sbjct: 1 MLQFIRNFAGSWVVKILFVLLILSFGIWGIGDVFRSSTP-TTVAEVGKVEIGQQALDQEF 59 Query: 57 SKRIALLKL---------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 +++ L+ Q L + ++Q LI TL GI V Sbjct: 60 RRQMERLRPMLGGNLTTDQAKRFGLLEQSLQSLIQRTLFDLAATDMGIAVGPEVVRLRIA 119 Query: 108 QHARNTGLSAEDFSSFLD---KQGIGDNHFKQYLAIQSIWPDVV---------------- 148 + + + + + +V Sbjct: 120 DEPAFRNQQGKFDPNIFRSVLRNNQLTEDGYVAMIQRETARQLVAGAVSAGLAPPQPLVQ 179 Query: 149 -------KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP------------- 188 + I + Y V F+ P Sbjct: 180 DLYRFRGEKRVAEVVTLPNASIGDVGAPDDAAIKQAYEDHQVRFTAPEYRALTVARLSPD 239 Query: 189 ---DNKLQNQGFVQKRIKDA----------------EESRLRLPKDCNKLEKFASKIHDV 229 + + ++K ++ + + + + Sbjct: 240 ALAKDIKIDDAQLRKAYEERANEFGAPEKRTVQMVVVDDEAKAKRIAEAAKAKGLAEAAK 299 Query: 230 SIG----KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 G + ++DL ++ + G +A+ + Sbjct: 300 ETGVEPVSLDNIGKADLPEIGDAAFALEPGKPSDAIKSALGWHVMAVTGVTPASTKS--F 357 Query: 286 AYLSAQNTPTKIEKHEAE 303 + Q ++ + Sbjct: 358 EDVRDQLAAEMKKEQALD 375 >gi|127513936|ref|YP_001095133.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella loihica PV-4] gi|126639231|gb|ABO24874.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella loihica PV-4] Length = 92 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 9/77 (11%), Positives = 23/77 (29%), Gaps = 4/77 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 ++ ++ E + K +K ++ G + + P F + Sbjct: 15 KELAEEIIEKLNKGAKFDQLAKKHSTCPSGKKGGSLGEFKKGQMVPAFDKV--CFSGELI 72 Query: 259 NP--YVTQKGVEYIAIC 273 P T+ G + + Sbjct: 73 TPHLVKTKFGWHVVKVL 89 >gi|94969792|ref|YP_591840.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Koribacter versatilis Ellin345] gi|94551842|gb|ABF41766.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Koribacter versatilis Ellin345] Length = 654 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 24/238 (10%), Positives = 67/238 (28%), Gaps = 3/238 (1%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + + + + + + S + ++ + Sbjct: 178 VADADIDNLVRQQQTKVKFDYASLSLADIEKGINPSDAEMKAWYEAHKDQFKDSLPEKRK 237 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + ++ + +++ N K + + ++ +L +P K Sbjct: 238 IKYVSVIGSKLPGVQPSDADIQKYYNDHKTEFTIPQTATVQHILVMVPQGADAKTDAAAK 297 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTN 259 + + R + +L K S + + +L +F++ + Sbjct: 298 AKAEDYLKQARGGANFGELAKKYSDDKGTGDSTLEVTPQGNLVKEFKDASLAGKTGDILG 357 Query: 260 PYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 P TQ G I I G +K+ ++ K + LR++A + Sbjct: 358 PVKTQFGYHIIKIQKNEPAGARSLDEVKSQIAIVMGGQKAADAAQKAADNLRNSARVQ 415 Score = 44.7 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 29/233 (12%), Positives = 71/233 (30%), Gaps = 24/233 (10%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWA----------MSSRIRTTINGEVITDGDISKRIALL 63 K + +L + C++ +V+ ++GE IT D SK + Sbjct: 12 KKIVLGGLLTVICVMMVVTLIPGGGIFGFGDTTVTGDSDLAKVDGEAITAADASKAAQNM 71 Query: 64 KLQKINGE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-------HAR 111 Q+ L AV+ LI + E + G+ + + + Sbjct: 72 AQQQRYPAQFVPFLMPQAVEMLIKQKAVLDEAHRMGLNVSDEELRAVLHKGQFGEILFPK 131 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 + + + +F+ Q + +SI ++ + +I ++ + Sbjct: 132 GNYVGDDAYQNFVQSQFSMTVPQFELELKKSIEIQKLRGVVEASATVADADIDNLVRQQQ 191 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 +Y ++ + K +A + + + + K+ S Sbjct: 192 TKVKFDYASLSLADIEKGINPSDAEM--KAWYEAHKDQFKDSLPEKRKIKYVS 242 >gi|223984303|ref|ZP_03634447.1| hypothetical protein HOLDEFILI_01741 [Holdemania filiformis DSM 12042] gi|223963736|gb|EEF68104.1| hypothetical protein HOLDEFILI_01741 [Holdemania filiformis DSM 12042] Length = 365 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 29/275 (10%), Positives = 65/275 (23%), Gaps = 25/275 (9%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSY---------KSWAMSSRIRTTINGEVITDGDISKR 59 L K V ++ I + +I + IT G+ Sbjct: 2 LQTLKKYWFVCLVGVLLIGASIYFAYDQNKGKLPGKSVGGEDVVFSIGDQDITAGEFYDT 61 Query: 60 I-ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 + + + + +EK V I T + + +S + + + L+A Sbjct: 62 LFNEMGVAGVYQFMEKAVVDPSIETTEEMKTQAQSYADSITAQYQSTYGDQYKEMLLTAL 121 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + + + D Q + + Sbjct: 122 NGVGYSKLSDLTDYFIHIQKTQQM-------------IKDYINAHADEYIPAYVEAKKPR 168 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 ++ +L + D + + + E V G Y+ Sbjct: 169 IVSHILIKMDDPANPTEEETNRVNAVKDALASGRDFGEVAQELSEDSGSAVQNGSIGYMD 228 Query: 239 ESD--LHPQFQNLLKKSQNNTTNPYVTQKGVEYIA 271 + P + L ++ + T G I Sbjct: 229 ADSQLVSPFLETALAMNEGEVSEWIQTTYGWHIIK 263 >gi|145299728|ref|YP_001142569.1| peptidyl-prolyl cis-trans isomerase [Aeromonas salmonicida subsp. salmonicida A449] gi|142852500|gb|ABO90821.1| peptidyl-prolyl cis-trans isomerase [Aeromonas salmonicida subsp. salmonicida A449] Length = 92 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 26/78 (33%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 +K+ + +E + ++F++ G + D+ F + + K Sbjct: 12 KTEKQCLEIKEKLAKGADFGQMAKRFSTCASSKRSGDLGEFSKGDMVKPFDDAVFKGELL 71 Query: 256 NTTNPYVTQKGVEYIAIC 273 P T+ G I + Sbjct: 72 TVLGPVRTKFGFHLIKVL 89 >gi|82931574|ref|XP_922271.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like [Mus musculus] gi|148677150|gb|EDL09097.1| mCG140299 [Mus musculus] Length = 131 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E + +++ G ++ + FQ Sbjct: 50 KIMEAMEKLKSGMRFSEVATQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDK 108 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 109 PVFTDPPVKTKFGYHIIMVEGRK 131 >gi|113931156|ref|NP_081457.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Mus musculus] gi|82905251|ref|XP_897983.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like [Mus musculus] gi|20139149|sp|Q9CWW6|PIN4_MOUSE RecName: Full=Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4; AltName: Full=Parvulin-14; Short=Par14; AltName: Full=Peptidyl-prolyl cis-trans isomerase Pin4; Short=PPIase Pin4; AltName: Full=Rotamase Pin4 gi|12845707|dbj|BAB26863.1| unnamed protein product [Mus musculus] gi|111600200|gb|AAI19358.1| Protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Mus musculus] gi|111601005|gb|AAI19356.1| Protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Mus musculus] gi|123229763|emb|CAM24632.1| protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 4 (parvulin) [Mus musculus] gi|148682182|gb|EDL14129.1| mCG116634 [Mus musculus] gi|149042164|gb|EDL95871.1| rCG36372, isoform CRA_a [Rattus norvegicus] Length = 131 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E + +++ G ++ + FQ Sbjct: 50 KIMEAMEKLKSGMRFSEVATQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDK 108 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 109 PVFTDPPVKTKFGYHIIMVEGRK 131 >gi|314936106|ref|ZP_07843453.1| foldase protein PrsA [Staphylococcus hominis subsp. hominis C80] gi|313654725|gb|EFS18470.1| foldase protein PrsA [Staphylococcus hominis subsp. hominis C80] Length = 329 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 30/230 (13%), Positives = 73/230 (31%), Gaps = 17/230 (7%) Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 +K D+ ++ + + G + F S L +QG+ + +K+ + + ++ + Sbjct: 80 DKYKDKVDTKRIDDDIKKEEKQYG-GKDQFESMLKQQGMTLDDYKEQKRLSAYQKQLLND 138 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + ++ + + + + Q V+K +E Sbjct: 139 KIKVSDKEIKDDTKKASHILIKVKSDSDKEGLSDKKAKAKAEKIQKEVEKNPNKFDELAK 198 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEY 269 + D +K G Y+++ + +F + L K + ++ T+ G Sbjct: 199 KESMDSASAKK---------GGSLGYVIKGQMVDKFDKALFKLKEGQISDIVKTEYGYHI 249 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIE---KHEAEYVKKLRSNAIIHY 316 I K+ L + K++ K K L + Y Sbjct: 250 IKAN---KEDDFNKQKSQLKTKIIEQKVQKNPKLLTNAYKDLLKEYNVDY 296 >gi|190571205|ref|YP_001975563.1| hypothetical protein WPa_0803 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357477|emb|CAQ54911.1| hypothetical protein WP0803 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 375 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 85/245 (34%), Gaps = 28/245 (11%) Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQK-----INGELEKIAVQELIVETLKKQEIE 91 A I +NGE I++ DI +RI + E++ +++LI E + E + Sbjct: 18 ATEIEIVADVNGEPISNLDIERRINFINSLLGTQKINQKEVKSQILRQLIDEIIIVSEAQ 77 Query: 92 KSGITFDSNTVNYFFVQHARN-TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 K I + +N L A++ ++ K I N K+ + Q +W +++ Sbjct: 78 KMNIELSNEELNNAVTLFLTQSLKLKADEVDQYVKKHNIDLNTLKKQIKCQLLWNKIIEV 137 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + E+ +++ + ++ + + ++ Sbjct: 138 GVVPLINISDQEVDDARKQKEKSDYLITFQEFIIPDQKIAEDLVKKLRTSNNPESSIKMS 197 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 + + ++L+ GK + +LE ++ P +G I Sbjct: 198 KATVNLSQLK-----------GKLKDVLEG-----------LEISDVAGPVSLSEGYSVI 235 Query: 271 AICDK 275 + DK Sbjct: 236 KVIDK 240 >gi|156541530|ref|XP_001603612.1| PREDICTED: hypothetical protein [Nasonia vitripennis] Length = 130 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 26/87 (29%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q +I +A E K ++ S G ++ + FQ + Sbjct: 45 EKQSKILEAMEKLKAGQKFNEVAATYSED-KARSGGDLGWMTRGSMVGPFQEAAFALPIS 103 Query: 257 -------TTNPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 104 SLGSPVYTDPPVKTKFGYHIIMVEGKK 130 >gi|93006642|ref|YP_581079.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter cryohalolentis K5] gi|92394320|gb|ABE75595.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter cryohalolentis K5] Length = 92 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 9/77 (11%), Positives = 23/77 (29%), Gaps = 4/77 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + +K+++ G + D+ P F Sbjct: 15 KEQAEDILAKLKKGNMFDVLAKKYSTCPSAKKGGSLGEFKQGDMVPPFDK--ICFSGELL 72 Query: 259 NP--YVTQKGVEYIAIC 273 P T+ G + + Sbjct: 73 TPHLVKTKFGWHVVKVL 89 >gi|126662091|ref|ZP_01733090.1| peptidyl-prolyl cis-trans isomerase (survival protein) [Flavobacteria bacterium BAL38] gi|126625470|gb|EAZ96159.1| peptidyl-prolyl cis-trans isomerase (survival protein) [Flavobacteria bacterium BAL38] Length = 451 Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 27/243 (11%), Positives = 74/243 (30%), Gaps = 8/243 (3%) Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 K L + I + + + +N G + + K Sbjct: 71 KQLEDRLYAHHAIQDSIIVTDAEVN-SFLNEQLDAAVEQIGSIDKVVKYYNKKNVEELRS 129 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + D ++ + E+ + + + + + I N + Sbjct: 130 HFFDAVKMNKLTDQMQKKILESVEITPEEVRNFFKGIPADEIPTFGAEMEVAQIVVNPVV 189 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEK---FASKI-HDVSIGKAQYLLESDLHPQFQNL 249 + ++ I E R + + K F+ + G + ++ +F+++ Sbjct: 190 GEDEKKRVIDKLNEIRQDVINGSSFFSKAVLFSEDPGSSSNGGFYKMNRKTAFVKEFKDV 249 Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++ + P+ T+ G I + + E L+ L + + K E ++++ Sbjct: 250 AFSLAEGEISEPFETEFGYHIIKVEKIKGQEVE--LRHILISPKVSIQAMKDAKEKIEQI 307 Query: 309 RSN 311 R+ Sbjct: 308 RNK 310 >gi|66472646|ref|NP_001018389.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Danio rerio] gi|82228864|sp|Q503Y7|PIN4_DANRE RecName: Full=Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4; AltName: Full=Parvulin-14; Short=Par14; AltName: Full=Peptidyl-prolyl cis-trans isomerase Pin4; Short=PPIase Pin4; AltName: Full=Rotamase Pin4 gi|63101795|gb|AAH95126.1| Zgc:110008 [Danio rerio] gi|182889122|gb|AAI64671.1| Zgc:110008 protein [Danio rerio] Length = 128 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 + +A E + +++ G ++ + FQ+ Sbjct: 47 KCMEAMEKIKSGMRFSEVAAQYSED-KARQGGDLGWMTRGSMVGPFQDAAFALPISTMDK 105 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 106 PVYTDPPVKTKFGYHIIMVEGKK 128 >gi|327277093|ref|XP_003223300.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1-like [Anolis carolinensis] Length = 92 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 7/66 (10%), Positives = 18/66 (27%), Gaps = 1/66 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 ++ + +F+ + G + F++ + P T Sbjct: 23 QKIKSGEEDFETLASQFSDCSSAKAGGDLGTFGRGQMQKPFEDASFALRTGEMSGPVFTD 82 Query: 265 KGVEYI 270 G+ I Sbjct: 83 SGIHII 88 >gi|304361792|gb|ADM26246.1| MIP25048p [Drosophila melanogaster] Length = 303 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 13/196 (6%), Positives = 41/196 (20%), Gaps = 1/196 (0%) Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 G S + K + + + + + Sbjct: 82 FGWEERIAHSTKECYFYDTITRKVHFTLPPSHHREKDRNAWGAILGDYSDFNDQLRCRHI 141 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + R + + Q + K + + + + + G Sbjct: 142 LVKHSESDRCSSYRERMVRRTKQEALNKIMHARDLIQSGKFEFAELANMISDCCSARHGG 201 Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 L + F+ + + + T+ G + + + + Sbjct: 202 DLGPLSLTQTPFVFERNILLLKDGELSEIFQTKAGYHILLRTPINYINYSTKNRRRRLKK 261 Query: 292 NTPTKIEKHEAEYVKK 307 + ++KK Sbjct: 262 IFIANEKAKSKAHLKK 277 >gi|220904184|ref|YP_002479496.1| hypothetical protein Ddes_0911 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868483|gb|ACL48818.1| hypothetical protein Ddes_0911 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 390 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 80/288 (27%), Gaps = 31/288 (10%) Query: 40 SRIRTTINGEVITDGDIS-----KRIALLKLQKIN-GELEKI---AVQELIVETLKKQEI 90 + T+NGE I + + AL +Q+ + +++ A+ LI+ L QE+ Sbjct: 51 EGVVATVNGEPIYLRTVQALLDGRSAALDTMQRPSLENMKRQYGDALGTLIIYALVNQEL 110 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 I + V + G E+ + FL ++ + N ++ + K Sbjct: 111 RSLQIPVTESAVESAVANVRADYG-GEEELARFLAEESLDGNEWRLLMRDYLAMQSFEKR 169 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF--SIPDNKLQNQGFVQKRIKDAEES 208 + + ++ + + L EE Sbjct: 170 VLLPGIRISLDSVRGYYKRHETEFNLPETLDICLTSAVDRQAVDNFCASFASVGPVREEQ 229 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVE 268 L C + A + G L K + P Sbjct: 230 TGELLLQCVEAGA-AQLPNAWQKG----------------LEKLAPGQCLPPRQEGDRWF 272 Query: 269 YIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKLRSNAII 314 +A+ + +AY + + E A ++ S A + Sbjct: 273 GLALVRRNPAHVMSVAEAYPLIENILREREKEAAFAHWLTAALSRAQV 320 >gi|319892874|ref|YP_004149749.1| Foldase protein PrsA precursor [Staphylococcus pseudintermedius HKU10-03] gi|317162570|gb|ADV06113.1| Foldase protein PrsA precursor [Staphylococcus pseudintermedius HKU10-03] gi|323464093|gb|ADX76246.1| foldase protein PrsA [Staphylococcus pseudintermedius ED99] Length = 318 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 29/251 (11%), Positives = 64/251 (25%), Gaps = 12/251 (4%) Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 ++ K E I K + K + V+ + + + + Sbjct: 45 EDVLKEIGNEQIASQSFKVLLNKILEKKYGDKVDQKQIDKETDEEIEKYGGKKQFESLLK 104 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 Q K K + EI LI+ Sbjct: 105 QQGMTIDDYKEQRKLVSYQKELLNEKVKVSDKEIK-----ESTKKASHILIKVKQDKDDK 159 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 L ++ +K + E+ ++ + G Y+++ + F+ Sbjct: 160 EGLSDKDAKKKIDEIKEKLDKNPKDFDKIAKEESMDSTKDKNGSLGYVIKGQMVKPFEEA 219 Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK---HEAEYV 305 K + ++ T+ G I K+ L + K+++ + Sbjct: 220 LFKLKEGQISDVVKTEYGYHIIRAD---KEDDFDKEKSKLKEKIIQNKLQEDPKILTDAY 276 Query: 306 KKLRSNAIIHY 316 K L + Y Sbjct: 277 KDLLDEYNVDY 287 >gi|90408115|ref|ZP_01216285.1| peptidyl-prolyl cis-trans isomerase C [Psychromonas sp. CNPT3] gi|90310801|gb|EAS38916.1| peptidyl-prolyl cis-trans isomerase C [Psychromonas sp. CNPT3] Length = 92 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 23/70 (32%) Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263 D + + K +K++S G + + P F + +Q T T Sbjct: 20 DIMQQLKKGAKFQTLAKKYSSCPSAKKGGSLGEFKKGSMVPAFDKVCFSAQILTPQIVKT 79 Query: 264 QKGVEYIAIC 273 + G I + Sbjct: 80 KFGWHVIKVL 89 >gi|260769945|ref|ZP_05878878.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio furnissii CIP 102972] gi|260615283|gb|EEX40469.1| peptidyl-prolyl cis-trans isomerase PpiC [Vibrio furnissii CIP 102972] gi|315182059|gb|ADT88972.1| peptidyl-prolyl cis-trans isomerase C [Vibrio furnissii NCTC 11218] Length = 92 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 25/75 (33%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ D + + K +K++ G + + PQF K + T Sbjct: 15 KEQADDIMQQLKKGAKFQTLAKKYSLCPSGKKGGDLGEFRQGQMVPQFDKACFKGEILTP 74 Query: 259 NPYVTQKGVEYIAIC 273 T+ G I + Sbjct: 75 QLVKTKFGWHVIKVL 89 >gi|156370357|ref|XP_001628437.1| predicted protein [Nematostella vectensis] gi|156215413|gb|EDO36374.1| predicted protein [Nematostella vectensis] Length = 108 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 26/87 (29%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + +A E K ++ G ++ + FQ + Q + Sbjct: 23 EKHSKAMEAMEKLKAGQKFNEVATAYSED-KARQGGDLGWMTRGSMVGPFQEAAFELQTS 81 Query: 257 TTN-------PYVTQKGVEYIAICDKR 276 T + P T+ G I + K+ Sbjct: 82 TVDRPVYTDPPVKTKFGYHIIMVEGKK 108 >gi|157963035|ref|YP_001503069.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella pealeana ATCC 700345] gi|167625206|ref|YP_001675500.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella halifaxensis HAW-EB4] gi|157848035|gb|ABV88534.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella pealeana ATCC 700345] gi|167355228|gb|ABZ77841.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella halifaxensis HAW-EB4] Length = 92 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 4/72 (5%) Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--Y 261 D + + K +K ++ G + + PQF + P Sbjct: 20 DIIKQLNKGAKFDVLAKKHSTCPSGKKGGSLGEFKKGQMVPQFDKV--CFTGELITPHLV 77 Query: 262 VTQKGVEYIAIC 273 T+ G I + Sbjct: 78 KTKFGWHVIKVL 89 >gi|74007777|ref|XP_849819.1| PREDICTED: similar to Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 (Rotamase Pin4) (PPIase Pin4) [Canis familiaris] Length = 224 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E + +++ G ++ + FQ Sbjct: 143 KIMEAMEKLKSGMRFNEVATQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGPDE 201 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 202 PVFTDPPIRTEFGYHIIMVEGRK 224 >gi|317494801|ref|ZP_07953212.1| ppic-type ppiase domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917126|gb|EFV38474.1| ppic-type ppiase domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 93 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 21/78 (26%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K+ D E +K + G + + P F + + Sbjct: 13 KEEKQALDLLEQLKNGGDFEKLAKKHSICPSGRKGGHLGEFKQGAMVPAFDKVVFSCPLL 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 73 EPYGPLHTQFGYHIIKVL 90 >gi|156541340|ref|XP_001599709.1| PREDICTED: similar to ENSANGP00000014025 [Nasonia vitripennis] Length = 162 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 10/92 (10%), Positives = 21/92 (22%), Gaps = 1/92 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + ++ + E+ + K++ G Sbjct: 68 RPSSWRESTITRSKAEALELVKEYREQIVSGEASFGSLASKYSDCSSAKRNGDLGPFGRG 127 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + F+ + P T GV I Sbjct: 128 AMQKPFEEAAFALKVGQISQPIDTDSGVHIIQ 159 >gi|322828325|gb|EFZ32193.1| peptidyl-prolyl cis-trans isomerase/rotamase, putative [Trypanosoma cruzi] Length = 117 Score = 55.8 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 7/104 (6%), Positives = 26/104 (25%), Gaps = 1/104 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + + + + + A+ + + + Sbjct: 11 HLLIKFDGSRNCVSHRTGKSTADVTYDAALAELKQWAKRIADGEITFEDAARQRSDCGSY 70 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 S G + + F++ + + + T+ G+ I Sbjct: 71 NSGGDLGFFGPGVMMKPFEDAARSLNVGEVSGVVRTESGLHIIK 114 >gi|159162752|pdb|1NMW|A Chain A, Solution Structure Of The Ppiase Domain Of Human Pin1 Length = 114 Score = 55.8 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 8 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 67 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 68 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 110 >gi|116492445|ref|YP_804180.1| peptidylprolyl isomerase [Pediococcus pentosaceus ATCC 25745] gi|122266091|sp|Q03GD4|PRSA_PEDPA RecName: Full=Foldase protein prsA; Flags: Precursor gi|116102595|gb|ABJ67738.1| Parvulin-like peptidyl-prolyl isomerase [Pediococcus pentosaceus ATCC 25745] Length = 295 Score = 55.8 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 34/287 (11%), Positives = 71/287 (24%), Gaps = 43/287 (14%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + F I ++ T +G IT + + N Sbjct: 1 MKKVLIGFASIAMAFTLAACG------NKTVATTSGGKITQDEYYSSLK-------NTTS 47 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 K +QE+IV + +++ + + + S + Sbjct: 48 GKQVLQEMIVNKVLEKQYGDKVSKKTVT----------KQYNSYKDQYGSSFKSILSSNG 97 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 L Q ++K ++ + + Sbjct: 98 MTTSSLKTQIRSNLLLKEAVKANDKISNADLKKEWKSYEPK---------------VTVA 142 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYL--LESDLHPQFQNL 249 Q + +D + +++++ GK S L F+ Sbjct: 143 QILVSKKSTAEDIIKKLNDGGDFTKLAKQYSTDSSTKNKGGKIAAFDDTNSTLDSSFKKA 202 Query: 250 LKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 K TT P T+ G + I + +K G L + Sbjct: 203 AFKLDEGKYTTTPVKTEYGYQVIKMINKPSKGKMSDHTKELKERIWN 249 >gi|242051344|ref|XP_002463416.1| hypothetical protein SORBIDRAFT_02g043490 [Sorghum bicolor] gi|241926793|gb|EER99937.1| hypothetical protein SORBIDRAFT_02g043490 [Sorghum bicolor] Length = 304 Score = 55.8 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 8/82 (9%), Positives = 25/82 (30%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 + + + + + G ++ + + P+F+ + N T+ Sbjct: 118 KSIIAGGADLSDLAVEHSLCPSKENGGMLGWVRKGQMVPEFEEAAFSAPLNKVVRCKTKF 177 Query: 266 GVEYIAICDKRDLGGEIALKAY 287 G + + +RD + Sbjct: 178 GWHLLQVLAERDQCVLQDIDPE 199 >gi|323491007|ref|ZP_08096201.1| hypothetical protein GPDM_16601 [Planococcus donghaensis MPA1U2] gi|323395363|gb|EGA88215.1| hypothetical protein GPDM_16601 [Planococcus donghaensis MPA1U2] Length = 313 Score = 55.8 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 24/294 (8%), Positives = 81/294 (27%), Gaps = 34/294 (11%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 ++ +L + + +++GE IT + + + + Sbjct: 30 MVIGVLLLFNILWFIAWLIPNDTGKAEKVASVSGEAITREEWLASM--------EEQHGR 81 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A+ EL+ E + + GI ++ + + + D Sbjct: 82 EALLELVNEKVMATAAQDYGIEVSDKEIDLELALVRSSRDGTEAALYTVDDA-------- 133 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + +++ + EI A +++ + RT + + + Sbjct: 134 --RQREKIKAQLILEKVLTKDVVIEKEEIKAFYDDNESLYDVKDSYRTRIIVLNSSAEAE 191 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESD---LHPQFQNLL 250 + + + + + G Y+ + + + Sbjct: 192 ---------ETIKELEKGSSFEATARERSIDSATGNLGGDIGYISNGEPGVDANVAKAVS 242 Query: 251 KKSQNNTTNPYVTQKG-VEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHE 301 K ++P + G I++ +K ++ +++ + ++ + Sbjct: 243 KVEVGGWSSPLPLETGKTAIISVTEKVNGQTFSYEDVEGHINRELALEQLPQAV 296 >gi|330975098|gb|EGH75164.1| periplasmic folding chaperone [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 239 Score = 55.8 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 19/173 (10%), Positives = 50/173 (28%), Gaps = 19/173 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + I + + + + +NGE I+ ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIIALMAFTGIEAMFTATSNKQNAAEVNGEDISQNELSQAV 60 Query: 61 ALLK-----------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + + L + A++ LI L Q + +F ++ Sbjct: 61 DMQRRQLAQQLSQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGAADAKFSFSDAALD 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 +Q F Q+ Q + +++ Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRLQF--RQMLGQEMLIGQVRAGV 171 >gi|262274058|ref|ZP_06051870.1| peptidyl-prolyl cis-trans isomerase PpiC [Grimontia hollisae CIP 101886] gi|262221868|gb|EEY73181.1| peptidyl-prolyl cis-trans isomerase PpiC [Grimontia hollisae CIP 101886] Length = 92 Score = 55.8 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 9/66 (13%), Positives = 21/66 (31%) Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 + K +K++ G + PQF + ++ T + T+ G Sbjct: 24 QLKKGAKFQTLAKKYSLCPSGKKGGDLGEFRRGQMVPQFDKVCFNAEILTPHIVKTKFGW 83 Query: 268 EYIAIC 273 + + Sbjct: 84 HVVKVL 89 >gi|167043769|gb|ABZ08460.1| putative PPIC-type PPIASE domain protein [uncultured marine microorganism HF4000_APKG3D20] Length = 625 Score = 55.8 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 12/129 (9%), Positives = 28/129 (21%), Gaps = 4/129 (3%) Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 W V+ N+ K +E + + + + Q + + Sbjct: 497 WYYVISNEVYDKI---HLERKDFVARKIAASHVLVAFKGASRAKASITRTKQEAKARAEE 553 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYV 262 ++ K + G + F + + Sbjct: 554 LRKQIVEGGKDFAEMASKNSDGPSASEGGDLGEFDFDGMAKPFSEAAFALEVGAVSVVVE 613 Query: 263 TQKGVEYIA 271 T+ G I Sbjct: 614 TEFGFHVIK 622 >gi|71652260|ref|XP_814791.1| peptidyl-prolyl cis-trans isomerase/rotamase [Trypanosoma cruzi strain CL Brener] gi|70879793|gb|EAN92940.1| peptidyl-prolyl cis-trans isomerase/rotamase, putative [Trypanosoma cruzi] Length = 117 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 8/104 (7%), Positives = 26/104 (25%), Gaps = 1/104 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + L + + + A+ + + + Sbjct: 11 HLLIKFDGSRNCVSHRTGKSTADLTYDAALAELKQWAKRIADGEITFEDAARQRSDCGSY 70 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 S G + + F++ + + + T+ G+ I Sbjct: 71 NSGGDLGFFGPGVMMKPFEDAARSLNVGEVSGVVRTESGLHIIK 114 >gi|315644393|ref|ZP_07897533.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus vortex V453] gi|315280270|gb|EFU43562.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus vortex V453] Length = 311 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 30/302 (9%), Positives = 80/302 (26%), Gaps = 32/302 (10%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 ++ I + S S +I IT+ + + + + ++ Sbjct: 26 VLFSGIFSQEASPSLKDGSLAVASIQDRAITEDEWVDELK--------KRYGREMLMTML 77 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 E + GI + V+ +R+ G FL + + L ++ Sbjct: 78 NRQAVALEAKAKGIDITTAEVDAEIDVMSRSYG----SKERFLSEMENQLGITEAELRME 133 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + + +++ +I A + + + + + + NQ Sbjct: 134 TTYRMLLEKIATSDVYIEPQQIDAYLELYPDQFRPKKQLNLSMIEVASEDEANQAM---- 189 Query: 202 IKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDL---HPQFQNLLKKSQNNT 257 + + + + G+ + E D L+ + Sbjct: 190 -----DRLENGEDFAALASEISLDEYTREEGGQIGLIEEDDPFLPPALLDAALELEPGDI 244 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE---AEYVKKLRSN--A 312 P + + D + + + + + +E ++LR A Sbjct: 245 AGPISLTDTYAIVYLHDI--IEPKAPSEDKIREAVRKQLALEQSISLSELERQLREKYEA 302 Query: 313 II 314 I Sbjct: 303 RI 304 >gi|261330093|emb|CBH13077.1| PPIase, putative [Trypanosoma brucei gambiense DAL972] Length = 115 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 7/77 (9%), Positives = 24/77 (31%), Gaps = 1/77 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 +++ K ++ + + S G + ++ F++ ++ Sbjct: 36 DAIKELQKWSQRIASGEVSFEEAASQRSDCGSYASGGDLGFFSSGEMMKPFEDAVRALKI 95 Query: 255 NNTTNPYVTQKGVEYIA 271 + + T G+ I Sbjct: 96 GDISPIVQTDSGLHIIK 112 >gi|251811182|ref|ZP_04825655.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus epidermidis BCM-HMP0060] gi|251805310|gb|EES57967.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus epidermidis BCM-HMP0060] Length = 322 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 33/249 (13%), Positives = 69/249 (27%), Gaps = 18/249 (7%) Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ L K +K D+ ++ + + G + S + Sbjct: 49 KEQIANTSFSIVLNKVLADKYKDKVDTKDIDKDIKKEEKQYGGKDQFESMLKQQ-----G 103 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 Q K + K + EI + LI+ S L Sbjct: 104 MSLDDYKEQKKLSAYQKQLLLDKVNVSDKEIK-----ENSKKASHILIKVKSKSSDKEGL 158 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-L 250 ++ +K K +E K +K + G Y+++ + F+ Sbjct: 159 SDKKAKEKAEKIQKEVEKNPNKFGEIAKKESMDSSSAKKDGSLGYVIKGQMVDSFEKALF 218 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH---EAEYVKK 307 K + + T G I + K+ + + K++K + K+ Sbjct: 219 KLKEGEVSKVVKTDYGYHIIKAD---KETDFNSEKSNIKQKLIEEKVQKKPKLLTDAYKE 275 Query: 308 LRSNAIIHY 316 L + Y Sbjct: 276 LLKEYKVDY 284 >gi|148225514|ref|NP_001084775.1| protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Xenopus laevis] gi|47125169|gb|AAH70686.1| MGC83096 protein [Xenopus laevis] Length = 127 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 25/83 (30%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 ++ +A E + +++ G ++ + FQ+ Sbjct: 46 KVMEAMEKLKSGVRFSEVATQYSED-KARQGGDLGWMTRGSMVGPFQDAAFALSVSTMDK 104 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 105 PVYTDPPVKTKFGYHIIMVEGRK 127 >gi|157785591|ref|NP_001099127.1| protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Bos taurus] gi|254782279|sp|A6QPY8|PIN4_BOVIN RecName: Full=Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4; AltName: Full=Parvulin-14; Short=Par14; AltName: Full=Peptidyl-prolyl cis-trans isomerase Pin4; Short=PPIase Pin4; AltName: Full=Rotamase Pin4 gi|151556240|gb|AAI49560.1| PIN4 protein [Bos taurus] gi|296470836|gb|DAA12951.1| protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Bos taurus] Length = 131 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT-- 258 +I +A E K +++ G ++ + FQ + Sbjct: 50 KILEAMEKLKSGMKFNEVAAQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPISVLDK 108 Query: 259 -----NPYVTQKGVEYIAICDKR 276 P T+ G I + ++ Sbjct: 109 PVFTDPPVKTKFGYHIIMVEGRK 131 >gi|162450295|ref|YP_001612662.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Sorangium cellulosum 'So ce 56'] gi|161160877|emb|CAN92182.1| Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Sorangium cellulosum 'So ce 56'] Length = 239 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 10/95 (10%), Positives = 31/95 (32%), Gaps = 2/95 (2%) Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQY 236 + + + P + + + +++ K + +++++ + G Sbjct: 141 VMYKGSRRAPPTVERTKDEAKARATEAMTKAKADPSKFTDVVKEYSDEPGADKRGGDLGK 200 Query: 237 LLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270 + + P+FQ K ++ T G I Sbjct: 201 FPKGAMVPEFQAGLEKIKVGQVSDLVETPFGYHVI 235 >gi|12963653|ref|NP_075860.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Mus musculus] gi|20139259|sp|Q9QUR7|PIN1_MOUSE RecName: Full=Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1; AltName: Full=Peptidyl-prolyl cis-trans isomerase Pin1; Short=PPIase Pin1 gi|6468200|dbj|BAA87037.1| PIN1 [Mus sp.] gi|6468202|dbj|BAA87038.1| PIN1 [Mus sp.] gi|12832817|dbj|BAB22270.1| unnamed protein product [Mus musculus] gi|12833994|dbj|BAB22743.1| unnamed protein product [Mus musculus] gi|26343949|dbj|BAC35631.1| unnamed protein product [Mus musculus] gi|54887364|gb|AAH38254.1| Protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 [Mus musculus] gi|74151907|dbj|BAE29739.1| unnamed protein product [Mus musculus] gi|74227721|dbj|BAE35702.1| unnamed protein product [Mus musculus] gi|148693178|gb|EDL25125.1| protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1, isoform CRA_b [Mus musculus] Length = 165 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 8/106 (7%), Positives = 26/106 (24%), Gaps = 1/106 (0%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + R + + ++ ++ + + +F+ Sbjct: 56 KVRCSHLLVKHSQSRRPSSWRQEKITRSKEEALELINGYIQKIKSGEEDFESLASQFSDC 115 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 116 SSAKARGDLGPFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 161 >gi|269986643|gb|EEZ92924.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 91 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 1/79 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 Q E + E+F+ G+ Y + +F+ ++ Sbjct: 13 KKQSLAYSILERINKGESFSKLAEEFSIDSSRRRGGELGYFGRGIMVKEFEKAAFSLNKG 72 Query: 256 NTTNPYVTQKGVEYIAICD 274 + P TQ G I D Sbjct: 73 QISQPIKTQFGYHIIKRLD 91 >gi|254255307|ref|ZP_04948623.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia dolosa AUO158] gi|124901044|gb|EAY71794.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia dolosa AUO158] Length = 292 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 24/282 (8%), Positives = 65/282 (23%), Gaps = 44/282 (15%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 A + + T+NG + ++ + + + +Q L+ L +Q E+ G+ Sbjct: 41 SADAGDVVATVNGVAVHRAELDEAM-----IGRQESMRPQVLQGLVARELLRQAAERDGL 95 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 A + + Sbjct: 96 GNTEPVRAA-------------------------------MRKARIDTENRLYIARHVST 124 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + ++ ++ + + + + + + R Sbjct: 125 EPVTDTDVRRRYDEIAGQFGPYQYQVSRMTFTDEPTARFALALLGSGESFANVAARTHAT 184 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICD 274 + + + K + P Q + + + T P + D Sbjct: 185 DVQTDWISFKTPPAEG-----RTQGLPLPLAQTIAAMNAGDITHTPVRAGDRFIVARLDD 239 Query: 275 KRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 +RD + + + A + +L A I Sbjct: 240 RRDAVVPSFAQASGAMRNALERKRADDAFAALIAQLAQKAAI 281 >gi|75773864|gb|AAI04654.1| PIN4 protein [Homo sapiens] Length = 141 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E + +++ G ++ + FQ Sbjct: 60 KIMEAMEKLKSGMRFNEVAAQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDK 118 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 119 PVFTDPPVKTKFGYHIIMVEGRK 141 >gi|311233706|gb|ADP86560.1| SurA domain protein [Desulfovibrio vulgaris RCH1] Length = 328 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 29/306 (9%), Positives = 83/306 (27%), Gaps = 28/306 (9%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE------LEK 74 VL + ++ A+ + T+NG + + E L Sbjct: 17 VLAVTLLLSAGGCADDALPPGVVATVNGHPVNMKLLQATHDAYAQSWTGAEGPSVEALRS 76 Query: 75 I---AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + +L+V+ L Q++ G + + + F + L + + Sbjct: 77 QYGAVLADLVVQELVLQKLAAVGASVTDAELGAA--EAEVRGDYPEGMFEAALVEDYLDL 134 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 +++ L + + + E+ + + + +R ++ + Sbjct: 135 EVWREMLRRRLALTKFAQVVLRSEVAISLEEVESWYRGHQGEFRLAARVRFIMVEGDTRE 194 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 A E + +S + + + +Q L Sbjct: 195 GVEAAAGAVASGAAPEEVEK-------------AFPGMSGNEL-LIRRDRIPAAWQKALA 240 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKL 308 + P + + + + AY + + K++ +V++ Sbjct: 241 ALKPGGVSPPIAFEGRWVAFRLIESLPAQDMSVVDAYPVIERRLLEEKLDAAFDVWVERN 300 Query: 309 RSNAII 314 + A + Sbjct: 301 LAGAKV 306 >gi|218885390|ref|YP_002434711.1| hypothetical protein DvMF_0286 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756344|gb|ACL07243.1| hypothetical protein DvMF_0286 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 415 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 33/287 (11%), Positives = 87/287 (30%), Gaps = 29/287 (10%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ--------KINGELEKIAVQELIVETLKKQEIE 91 + T+N + IT + + + + + +LIV+ L Q + Sbjct: 40 EGVVATVNEQPITLRTLEAVHDMSSMSWSGHAPSVEQLQAQYGAVLSDLIVQELVAQALA 99 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 + I V + A +F L ++ I + ++ L + ++ Sbjct: 100 RENIAVSDGEVAEA--EAEVRGDYPAGEFEKSLVEEYIDLDLWRSRLRARIAMQKFMRLI 157 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 E+ + L R V F + + + S Sbjct: 158 LRPTISIPLEEVETYYAAHR---QDYRLPRRVQFLVVAGPDKAAVDKARA-----LSLGG 209 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVE-Y 269 + + + + +V + L + + L + + + G + + Sbjct: 210 AKPADVEAAQPSVTVREVK------MRRDRLPALWSKELAGLAPGQASAVKQGEWGYQSF 263 Query: 270 IAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVK-KLRSNAII 314 + + + + E++ + K+++ A +++ +LR A I Sbjct: 264 LLVGEIAEKQLELSHAYPLVERVLLERKMDEAYARWMEAELR-TARI 309 >gi|71417797|ref|XP_810661.1| peptidyl-prolyl cis-trans isomerase/rotamase [Trypanosoma cruzi strain CL Brener] gi|70875226|gb|EAN88810.1| peptidyl-prolyl cis-trans isomerase/rotamase, putative [Trypanosoma cruzi] Length = 117 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 8/104 (7%), Positives = 26/104 (25%), Gaps = 1/104 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + L + + + A+ + + + Sbjct: 11 HLLIKFDGSRNCVSHRTGKSTADLTYDAALAELKQWAKRIADGDITFEDAARQRSDCGSY 70 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 S G + + F++ + + + T+ G+ I Sbjct: 71 NSGGDLGFFGPGVMMKPFEDAARSLNVGEVSGVVRTESGLHIIK 114 >gi|94500758|ref|ZP_01307287.1| peptidyl-prolyl cis-trans isomerase C [Oceanobacter sp. RED65] gi|94427080|gb|EAT12061.1| peptidyl-prolyl cis-trans isomerase C [Oceanobacter sp. RED65] Length = 92 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 9/74 (12%), Positives = 26/74 (35%), Gaps = 1/74 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN-NT 257 +K ++ ++ + +++++ G + D+ F +++ K Sbjct: 14 KKLAEELKQRLAKGEDFGKLAKQYSTCPSKKQGGNLGEFHKGDMVKAFDDVVFKRPILKV 73 Query: 258 TNPYVTQKGVEYIA 271 P T+ G I Sbjct: 74 HGPIKTRFGYHLIK 87 >gi|21233477|ref|NP_639394.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770441|ref|YP_245203.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. campestris str. 8004] gi|21115325|gb|AAM43276.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575773|gb|AAY51183.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv. campestris str. 8004] Length = 322 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 35/316 (11%), Positives = 82/316 (25%), Gaps = 41/316 (12%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITDGDISKRIA 61 V T +S ++ L L + I + S ++ S + TT+ + Sbjct: 22 VITEISCMLQSLCLSGALALGLIAGVPSAQAATADSGVSHSVTTV-------------LQ 68 Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 + K E +A+ +L + A D + Sbjct: 69 IGKQAFTAPEYRALALADL-------------PRGANPAGAADPAFVRAFADRRLLLDQA 115 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 + Q + A +I D ++ ++ A + L Sbjct: 116 RQVHLQDDPVVAVQLRQATDAILADAMQRRARTTAHIDAAQVQAQFNAHPHDYDEVRLSH 175 Query: 182 TVLFSIPDNKLQ-----NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQ 235 + P + + R + + ++ + G+ Sbjct: 176 VFVALQPQGDARRGAPLSDAQALARAQQLKRQLDSGTPFEEVAKRESDDGSTAAEGGELS 235 Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 + ++ F ++ + + P +G I + + E A Q Sbjct: 236 SIFLRNVADVFAAPVQALGVGDVSAPVRGPEGYHLIRVDARIPATLETA-----RGQIEV 290 Query: 295 TKIEKHEAEYVKKLRS 310 E+ +++LR Sbjct: 291 QLREQAATAALERLRQ 306 >gi|221116075|ref|XP_002158589.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 149 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 7/125 (5%), Positives = 25/125 (20%), Gaps = 1/125 (0%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 + + + + R + + + + Sbjct: 21 YFNTETNESQWEKPDNEEFQVRASHLLVKHKGSRRPSSWKQNVITRTEEEALDIIKNYHK 80 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + + + + G + + F+ N + P + Sbjct: 81 QITSGKTTLAALAQSESDCSSAKNGGDLGFFGPGQMQKSFEEAAFALKINEMSGPVYSDS 140 Query: 266 GVEYI 270 G+ I Sbjct: 141 GIHLI 145 >gi|58264984|ref|XP_569648.1| transcriptional elongation regulator [Cryptococcus neoformans var. neoformans JEC21] gi|134109581|ref|XP_776905.1| hypothetical protein CNBC3960 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259585|gb|EAL22258.1| hypothetical protein CNBC3960 [Cryptococcus neoformans var. neoformans B-3501A] gi|57225880|gb|AAW42341.1| transcriptional elongation regulator, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 178 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 8/92 (8%), Positives = 21/92 (22%), Gaps = 1/92 (1%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 R +I ++ Q + + + G + Sbjct: 83 WRNDKITITSDEAQAIIEQHIAYLQSLPPADLPKEFAKIASTESDCSSARKGGDLGWFGR 142 Query: 240 SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270 + F++ + + T G+ I Sbjct: 143 GQMQKPFEDATFNTPVGQLSGIVKTDSGIHVI 174 >gi|228475889|ref|ZP_04060599.1| foldase protein PrsA [Staphylococcus hominis SK119] gi|228270044|gb|EEK11514.1| foldase protein PrsA [Staphylococcus hominis SK119] Length = 319 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 30/230 (13%), Positives = 73/230 (31%), Gaps = 17/230 (7%) Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 +K D+ ++ + + G + F S L +QG+ + +K+ + + ++ + Sbjct: 70 DKYKDKVDTKRIDDDIKKEEKQYG-GKDQFESMLKQQGMTLDDYKEQKRLSAYQKQLLND 128 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + ++ + + + + Q V+K +E Sbjct: 129 KIKVSDKEIKDDTKKASHILIKVKSDSDKEGLSDKKAKAKAEKIQKEVEKNPNKFDELAK 188 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEY 269 + D +K G Y+++ + +F + L K + ++ T+ G Sbjct: 189 KESMDSASAKK---------GGSLGYVIKGQMVDKFDKALFKLKEGQISDIVKTEYGYHI 239 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIE---KHEAEYVKKLRSNAIIHY 316 I K+ L + K++ K K L + Y Sbjct: 240 IKAN---KEDDFNKQKSQLKTKIIEQKVQKNPKLLTNAYKDLLKEYNVDY 286 >gi|90577547|ref|ZP_01233358.1| peptidyl-prolyl cis-trans isomerase C [Vibrio angustum S14] gi|90440633|gb|EAS65813.1| peptidyl-prolyl cis-trans isomerase C [Vibrio angustum S14] Length = 108 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 24/91 (26%), Gaps = 16/91 (17%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF------------ 246 ++ D E + K +K ++ G + + PQF Sbjct: 15 KELADDILEHLKKGAKFQELAKKHSTCPSGKKGGDLGEFRKGAMVPQFDKAVFSGKAIST 74 Query: 247 ----QNLLKKSQNNTTNPYVTQKGVEYIAIC 273 + + P T+ G I + Sbjct: 75 SEALKKKNNNLRGLIPEPVKTKFGWHIIKVL 105 >gi|72392211|ref|XP_846906.1| peptidyl-prolyl cis-trans isomerase/rotamase [Trypanosoma brucei TREU927] gi|62175211|gb|AAX69357.1| peptidyl-prolyl cis-trans isomerase/rotamase, putative [Trypanosoma brucei] gi|70802936|gb|AAZ12840.1| peptidyl-prolyl cis-trans isomerase/rotamase, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 115 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 7/77 (9%), Positives = 24/77 (31%), Gaps = 1/77 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 +++ K ++ + + S G + ++ F++ ++ Sbjct: 36 DAIKELQKWSQRIASGEVSFEEAASQRSDCGSYASGGDLGFFSSGEMMKPFEDAVRALKI 95 Query: 255 NNTTNPYVTQKGVEYIA 271 + + T G+ I Sbjct: 96 GDISPIVQTDSGLHIIK 112 >gi|307721945|ref|YP_003893085.1| SurA domain-containing protein [Sulfurimonas autotrophica DSM 16294] gi|306980038|gb|ADN10073.1| SurA domain protein [Sulfurimonas autotrophica DSM 16294] Length = 278 Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 40/290 (13%), Positives = 84/290 (28%), Gaps = 31/290 (10%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEI 90 ++ + + + + + IT DI K + L LI + L++ EI Sbjct: 11 FAFVNADVYDGVAVVVEDKAITLLDIQKEMQAEHLDAKKAS------DILIRKKLEELEI 64 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 K I+ S V + A GL+ + +Q ++ + Q + + Sbjct: 65 AKRNISVSSAEVYDDIKKMAEANGLTISQLYDAIREQNGLNSEEFKEKIKQKLLSQKLYA 124 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + + + + + + Sbjct: 125 AIAMSSLSEPNDEEIKEYYKLHTDKFNHPESFSVIIYSAKDKSRLKEKTDNPMFYAPDIS 184 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK--GV- 267 + L + + P+ N+L+K+ + P ++ G Sbjct: 185 TQEQV---------------------LFYNKISPKLANILQKTPQDHFTPILSDGKGGFM 223 Query: 268 -EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 YI K +LK + K E ++Y +LR NA I+ Sbjct: 224 SFYIKSVAKSKETDLKSLKPQIMNAIMADKREAVLSDYFARLRDNADINI 273 >gi|329314517|gb|AEB88930.1| Foldase protein prsA [Staphylococcus aureus subsp. aureus T0131] Length = 320 Score = 55.8 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 81/309 (26%), Gaps = 27/309 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K++ V + + + + + A S+ +I+ K + + Sbjct: 1 MKMINKLIVPVTASALLLGACGASATDSK-----ENTLISS----KAGDVTVADTMKKIG 51 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + E L K +K + ++ + + G + + + Sbjct: 52 KDQITNASFTEMLNKILADKYKNKVNDKKIDEQIEKMQKQYGGKDKFEKALQQQ-----G 106 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K K + EI + LI+ L Sbjct: 107 LTADKYKENLRTAAYHKELLSDKIKISDSEIK-----EDSKKASHILIKVKSKKSDKEGL 161 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-L 250 ++ QK + +E K +K + G+ Y+L+ F+ Sbjct: 162 DDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKALF 221 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE---KHEAEYVKK 307 K + + G I + K L + K++ K + K Sbjct: 222 KLKDGEVSEVVKSSFGYHIIKAD---KPTDFNSEKQSLKEKLVDQKVQKNPKLLTDAYKD 278 Query: 308 LRSNAIIHY 316 L + + Sbjct: 279 LLKEYDVDF 287 >gi|332882479|ref|ZP_08450097.1| PPIC-type PPIASE domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679539|gb|EGJ52518.1| PPIC-type PPIASE domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 705 Score = 55.8 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 20/239 (8%), Positives = 53/239 (22%), Gaps = 2/239 (0%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLK-KQEIEKSGITFDSNTVNYFFVQHAR 111 + + I + + + + A +E I + L+ + D+ Sbjct: 230 KQEAYRNIQYIVVNEKPSAADTQAEKEAINKLLQPEIVFNNQTHANDTIAGFAQTKNVKE 289 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 ++ L V L I + Sbjct: 290 FVDRHSDTPYDTLFVSKEDLRSAYADTLFALPVGKVFGPYEEDGNLKLSRMIAKDPNGAV 349 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-VS 230 + + + P+ + K E++ + + + Sbjct: 350 KASHILIAYKGSQAATPNTTRTKEEAKAKAESLLAEAKAAGADFAALASENSDEPGANYR 409 Query: 231 IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 G + + F+ + + T T G + + DK + + Sbjct: 410 GGDLGFFKRGAMVKPFEQFVFANPVGTIGIVETDFGYHVVKVTDKAPTVQLATITRKVE 468 >gi|292486653|ref|YP_003529523.1| peptidyl-prolyl cis-trans isomerase C [Erwinia amylovora CFBP1430] gi|292897890|ref|YP_003537259.1| peptidyl-prolyl cis-trans isomerase C [Erwinia amylovora ATCC 49946] gi|291197738|emb|CBJ44833.1| peptidyl-prolyl cis-trans isomerase C [Erwinia amylovora ATCC 49946] gi|291552070|emb|CBA19107.1| peptidyl-prolyl cis-trans isomerase C [Erwinia amylovora CFBP1430] gi|312170719|emb|CBX78981.1| peptidyl-prolyl cis-trans isomerase C [Erwinia amylovora ATCC BAA-2158] Length = 93 Score = 55.8 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 22/78 (28%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E + +K ++ G + + P F + + Sbjct: 13 KEEKLALDLLEQLRQGADFEKLAKKHSTCPSGKKGGHLGEFKQGAMVPAFDKVVFSCPLI 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 73 EPQGPLHTQFGYHIIKVL 90 >gi|313219707|emb|CBY30627.1| unnamed protein product [Oikopleura dioica] Length = 158 Score = 55.8 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 7/87 (8%), Positives = 21/87 (24%), Gaps = 1/87 (1%) Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + + + +++ K + + + + G + Sbjct: 68 WRNDNITISKEEALEQLNKYMVQIESGERSFADLASEVSDCSSAKRGGDLGPFGRGQMQR 127 Query: 245 QFQNLLKK-SQNNTTNPYVTQKGVEYI 270 F+ + T GV I Sbjct: 128 PFEEATFALKVGEMSGVVDTDSGVHII 154 >gi|157376732|ref|YP_001475332.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sediminis HAW-EB3] gi|157319106|gb|ABV38204.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sediminis HAW-EB3] Length = 92 Score = 55.8 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 23/77 (29%), Gaps = 4/77 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 ++ +D + + K +K ++ G + + P F + Sbjct: 15 KELAEDIIKQLNKGAKFDVLAKKHSTCPSGKKGGSLGEFKKGQMVPPFDKV--CFTGELI 72 Query: 259 NP--YVTQKGVEYIAIC 273 P T+ G I I Sbjct: 73 TPHLVKTKFGWHVIKIL 89 >gi|168041763|ref|XP_001773360.1| predicted protein [Physcomitrella patens subsp. patens] gi|162675402|gb|EDQ61898.1| predicted protein [Physcomitrella patens subsp. patens] Length = 237 Score = 55.8 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 13/129 (10%), Positives = 36/129 (27%), Gaps = 10/129 (7%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 +Q + + + + + G ++ P+F+ K+ Sbjct: 41 DQLQLLLDIQRQVMQDGVDLSDLAAEHSICASKDVGGMLGWISLGRTVPEFEEAAFKAPL 100 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRS--- 310 N T+ G + + +R+ L+ + + + + +R Sbjct: 101 NKLVRVKTKHGWHLLQVLSEREASF---LRDIDVQELSTNMEDPEFLQNAQLLDVREPDE 157 Query: 311 --NAIIHYY 317 A I + Sbjct: 158 IATASIEGF 166 >gi|330448427|ref|ZP_08312075.1| PPIC-type PPIASE domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492618|dbj|GAA06572.1| PPIC-type PPIASE domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 108 Score = 55.5 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 25/91 (27%), Gaps = 16/91 (17%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF------------ 246 ++ D E + K + +K ++ G + + PQF Sbjct: 15 KELADDILEQLKKGAKFQDLAKKHSTCPSGKKGGDLGEFRKGAMVPQFDKAVFSGNAIST 74 Query: 247 ----QNLLKKSQNNTTNPYVTQKGVEYIAIC 273 + + P T+ G I + Sbjct: 75 SQALKMKNNNLRGLIPEPVKTKFGWHVIKVL 105 >gi|300714778|ref|YP_003739581.1| peptidyl-prolyl cis-trans isomerase C [Erwinia billingiae Eb661] gi|299060614|emb|CAX57721.1| Peptidyl-prolyl cis-trans isomerase C [Erwinia billingiae Eb661] Length = 93 Score = 55.5 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 22/78 (28%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K +D + +K ++ G + + P F + + Sbjct: 13 KEEKLAQDILAELEKGADFEKLAKKHSTCPSGKKGGHLGEFKQGAMVPAFDKVVFSCPLI 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 73 VPYGPLHTQFGYHIIKVL 90 >gi|310766107|gb|ADP11057.1| Peptidyl-prolyl cis-trans isomerase C [Erwinia sp. Ejp617] Length = 93 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 22/78 (28%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E + +K ++ G + + P F + + Sbjct: 13 KEEKLAFDLLEQLKQGADFEKLAKKHSTCPSGKKGGHLGEFKQGAMVPAFDKVVFSCPLI 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 73 EPQGPLHTQFGYHIIKVL 90 >gi|46580311|ref|YP_011119.1| hypothetical protein DVU1902 [Desulfovibrio vulgaris str. Hildenborough] gi|46449728|gb|AAS96378.1| conserved hypothetical protein [Desulfovibrio vulgaris str. Hildenborough] Length = 312 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 28/306 (9%), Positives = 83/306 (27%), Gaps = 28/306 (9%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE------LEK 74 +L + ++ A+ + T+NG + + E L Sbjct: 1 MLAVTLLLSAGGCADDALPPGVVATVNGHPVNMKLLQATHDAYAQSWTGAEGPSVEALRS 60 Query: 75 I---AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + +L+V+ L Q++ G + + + F + L + + Sbjct: 61 QYGAVLADLVVQELVLQKLAAVGASVTDAELGAA--EAEVRGDYPEGMFEAALVEDYLDL 118 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 +++ L + + + E+ + + + +R ++ + Sbjct: 119 EVWREMLRRRLALTKFAQVVLRSEVAISLEEVESWYRGHQGEFRLAARVRFIMVEGDTRE 178 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 A E + +S + + + +Q L Sbjct: 179 GVEAAAGAVASGAAPEEVEK-------------AFPGMSGNEL-LIRRDRIPAAWQKALA 224 Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKL 308 + P + + + + AY + + K++ +V++ Sbjct: 225 ALKPGGVSPPIAFEGRWVAFRLIESLPAQDMSVVDAYPVIERRLLEEKLDAAFDVWVERN 284 Query: 309 RSNAII 314 + A + Sbjct: 285 LAGAKV 290 >gi|291535575|emb|CBL08687.1| hypothetical protein ROI_15630 [Roseburia intestinalis M50/1] Length = 347 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 26/326 (7%), Positives = 75/326 (23%), Gaps = 47/326 (14%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI----- 68 T +L + +++ + T+NGE + G + + Sbjct: 3 SRKITALLLSSAMALSVLTGCGGVNKDKTVATLNGEPVKLGVANFAARFGQAGADDFYTA 62 Query: 69 ------------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 + + L + + +++ ++ + A Sbjct: 63 YFGKNVWTSDLYGNGTTGQDNFKDSVMDSLEDMYVLQLHMDEYNVSITDDEKAAITAAAA 122 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + +++D + L + IQS + + E + A Sbjct: 123 QFMEDNSKDAINALGATQEIVEEYLTLETIQSKMKAAIVAGADTNVTDEEAKTGAYSYVG 182 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 + T ++ ++ V ++ EE ++ ++ Sbjct: 183 ISKTT--------------HQDESGNTVDYTDEEKEELAAKVADFAKAAKEDGLDAAAED 228 Query: 231 IGK---AQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 G + D L + T+ + D + Sbjct: 229 AGYTVSTGTFTQEDDSVDDNLLAALKNLKEGEVTDLIDGDSSYFVARL----DKEVDEDA 284 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRS 310 + + E + + Sbjct: 285 TEETRQSIIEQRKDDLYDETLDGWKE 310 >gi|227485002|ref|ZP_03915318.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] gi|227236999|gb|EEI87014.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] Length = 302 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 33/315 (10%), Positives = 79/315 (25%), Gaps = 43/315 (13%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL----------------- 63 + + CI + S + ++G+ I K + Sbjct: 12 LSLCTCICLLASCAKSKDEANSIAIVDGKSIAKQSFDKELEFYLAFYTKKYGDSYLESKN 71 Query: 64 -KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 K + L + +I + + ++ I D NT N + G ++ Sbjct: 72 AKGKTNKEILRDDLLDSMIKDQVMLNDLADKKIEIDDNTANKLRSDMEKELGDKNSLKAN 131 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + K + E+ + + + Sbjct: 132 IKALNMSEADFSDVIFNDSIRKMHYEYFLTHNKIKDSEILQYYKANEELHKMYKY----- 186 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + + + V+ +IK+ + R L + S + Sbjct: 187 --NVLVFDTKEACEEVKAKIKNQVDFRQALKSPVKNFDVINSDFVYID------------ 232 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 P K ++ ++ + + I + L Q ++ Sbjct: 233 DPLLVKSKLKEKDKVSDIFEDNNKFMILMIN------SYNENENELLMQTKDKYLKDAYD 286 Query: 303 EYVKKLRSNAIIHYY 317 +Y+ KL +A I + Sbjct: 287 DYLNKLVKSAKIKVF 301 >gi|74228245|dbj|BAE23993.1| unnamed protein product [Mus musculus] Length = 165 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 9/106 (8%), Positives = 27/106 (25%), Gaps = 1/106 (0%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + RT + + ++ ++ + + +F+ Sbjct: 56 KVRCSHLLVKHSQSRRTSSWRQEKITRSKEEALELINGYIQKIKSGEEDFESLASQFSDC 115 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 116 SSAKARGDLGPFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 161 >gi|150866261|ref|XP_001385798.2| Peptidyl-prolyl cis-trans isomerase [Scheffersomyces stipitis CBS 6054] gi|149387517|gb|ABN67769.2| Peptidyl-prolyl cis-trans isomerase [Scheffersomyces stipitis CBS 6054] Length = 177 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 13/124 (10%), Positives = 33/124 (26%), Gaps = 2/124 (1%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 F ++ + + + + PD ++ +K + Sbjct: 51 KHFRANGNKPVVQDDGKVRVSHLLIKNVQSRKPRSWKSPDGITLSRDEAISILKKHQARI 110 Query: 210 LRLP-KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 L K E + G + + + P+F+ + ++ T GV Sbjct: 111 LNGEIKLSELAETESDCSSHSQGGDLGFFGKGQMQPKFEEAAYGLNVGEISDIIETDSGV 170 Query: 268 EYIA 271 + Sbjct: 171 HILQ 174 >gi|222056243|ref|YP_002538605.1| hypothetical protein Geob_3161 [Geobacter sp. FRC-32] gi|221565532|gb|ACM21504.1| conserved hypothetical protein [Geobacter sp. FRC-32] Length = 580 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 23/282 (8%), Positives = 74/282 (26%), Gaps = 33/282 (11%) Query: 41 RIRTTI-NGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 R+ TI + IT D+ + + + + G + Sbjct: 321 RVIATIKGDKPITVADLGEMLK--------------------QKFFHGVKEAAKGKRINE 360 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + + + + + ++ ++ + Sbjct: 361 QKMPALYDIFYARLYPMEAKKLGLDKTESYKNR--IKDFRDSLLFGMFIQKVVASEIKVT 418 Query: 160 EMEIPANKQKMKNITVREYLIRTV-LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + EI A+ + +++ L + + ++ + + + Sbjct: 419 DEEIKAHYNAEIDEFSLPEMLKLRGLAFTRKDFAEAAMEKLQKGTEYQWLQANAEGLVPG 478 Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV-EYIAICDKRD 277 + + L + Q + ++ + T +G I + + Sbjct: 479 DTEGLMSFSQTP------VTRKSLPEKMQEAIAAAKPGEYRLFETPEGFVYVIQVQEVIP 532 Query: 278 LGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + +K ++ + K+ K ++ +KLR + Y Sbjct: 533 AKPQPLEQVKQSITKEVFNQKLNKSVEDWGQKLREAYKVQVY 574 Score = 44.3 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 33/286 (11%), Positives = 66/286 (23%), Gaps = 51/286 (17%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL-----EKIAVQELIVETLKKQE 89 S +S T+ +V+T + ++ +A L + E I + LI L QE Sbjct: 56 SPKFASVPVATVGDDVVTMEEFNQSLAALHQRAGEDESAGKKDYNIVLNRLINSKLIVQE 115 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 E G+ ++ Sbjct: 116 AENMGLADLPEVKEK-------------------------------------------LE 132 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + E K + V + ++ K + A ++ Sbjct: 133 DFPRMAIKEELKEQQIKDLKPAEADTERFYKEAVKELKVKSVRFDKEDDAKELARAVQAG 192 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 + N L + + L + + Sbjct: 193 GNFDELANSLIESGKATGVKEGEFV--KAKELLPQVAHIVSSLRVGGISPVVQVGPAYTI 250 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN-AII 314 + + D R ++ + Q K + EY L A I Sbjct: 251 LKLEDIRYPADDMEAREAAREQALALKQLQVLTEYNGMLVKKYAKI 296 >gi|326202453|ref|ZP_08192322.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium papyrosolvens DSM 2782] gi|325987571|gb|EGD48398.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium papyrosolvens DSM 2782] Length = 363 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 32/270 (11%), Positives = 83/270 (30%), Gaps = 11/270 (4%) Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 T D +++ ++ + ++QE+ ++ +K +E D + + Q + Sbjct: 76 TKFDWNQKYQGSTAKEQIKKATLDSIQEIKIQLIKAKEAGVKLEKADLDNIEKAIDQRIQ 135 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 N G S + L + + + + K + EI K Sbjct: 136 NAGGSRAEAEKQLKNDYGVSLADYKEVYKELVLSQKYMESERNKVKITDDEIKKQYDAHK 195 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGF-VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 + + ++ + +K K+ ++ L+ + ++ A K D Sbjct: 196 ADYDKVTVTHILVATQDLQTGAAFTEGKKKEAKEKADNLLKQIQQGADMQALAEKNSDDK 255 Query: 231 IGK-------AQYLLESDLHPQFQNLLKKSQN-NTTNPYVTQKGVEYIAICDKRDLGGEI 282 + + PQF++ + T T G + +KR+ Sbjct: 256 GQDGKVNNKGVYTFSKGKMVPQFEDWAFANHKAGDTGVVETSYGYHVMK-FEKREETKFD 314 Query: 283 ALKAYLSAQNTPTKIE-KHEAEYVKKLRSN 311 +K + + T+ + + + + Sbjct: 315 DVKDEIKSTILNTRFNDEFITKKLDSWKKE 344 >gi|121591689|ref|ZP_01678920.1| chaperone SurA [Vibrio cholerae 2740-80] gi|121546451|gb|EAX56679.1| chaperone SurA [Vibrio cholerae 2740-80] Length = 133 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 49/115 (42%), Gaps = 8/115 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71 +KL + ++ + ++ + +N VI D+ + +K + Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60 Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 L + +++LI++TL++QE ++ G+ D N +N + A+N + E Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQ 115 >gi|307171509|gb|EFN63350.1| Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Camponotus floridanus] Length = 125 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 27/87 (31%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q +I +A E K ++ S G ++ + FQ+ + Sbjct: 40 EKQSKILEALEKLKAGQKFNEVAATYSED-KARSGGDLGWMTRGSMVGPFQDAAFALPIS 98 Query: 257 -------TTNPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 99 NLASPIYTDPPVKTKFGYHIIMVEGKK 125 >gi|313607374|gb|EFR83765.1| foldase protein PrsA [Listeria monocytogenes FSL F2-208] Length = 257 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 20/233 (8%), Positives = 63/233 (27%), Gaps = 5/233 (2%) Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 K E+ + + + K + + + Sbjct: 1 KDELYDAMKDKYGSEFVQQLTFEKVLSDKYKVSDEDVDKKFNEYKSQYGDQFSAVLAQSG 60 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 + + F + + + + + + + + + + K+ E Sbjct: 61 LTEKSFKSQLKYN-LLVQKATEANTDTSDKVLKDYYKTWQPDITVSHILVADENKAKEVE 119 Query: 207 ESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVT 263 + K + +++++ + G+ + P F+ K++ + + P T Sbjct: 120 QKLKDGAKFADLAKEYSTDTATKENDGQLAPFGPGKMDPAFEKAAYALKNKGDISAPVKT 179 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKKLRSNAIIH 315 Q G I + K + A ++ + +K+ A + Sbjct: 180 QYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKEEFKKANVE 232 >gi|291540816|emb|CBL13927.1| hypothetical protein RO1_36800 [Roseburia intestinalis XB6B4] Length = 361 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 26/326 (7%), Positives = 75/326 (23%), Gaps = 47/326 (14%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI----- 68 T +L + +++ + T+NGE + G + + Sbjct: 17 SRKITALLLSSAMALSVLTGCGGVNKDKTVATLNGEPVKLGVANFAARFGQAGADDFYTA 76 Query: 69 ------------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 + + L + + +++ ++ + A Sbjct: 77 YFGKNVWTSDLYGNGTTGQDNFKDSVMDSLEDMYVLQLHMDEYNVSITDDEKAAITAAAA 136 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + +++D + L + IQS + + E + A Sbjct: 137 QFMEDNSKDAINALGATQEIVEEYLTLETIQSKMKAAIVAGADTNVTDEEAKTGAYSYVG 196 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 + T ++ ++ V ++ EE ++ ++ Sbjct: 197 ISKTT--------------HQDESGNTVDYTDEEKEELAAKVADFAKAAKEDGLDAAAED 242 Query: 231 IGK---AQYLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 G + D L + T+ + D + Sbjct: 243 AGYTVSTGTFTQEDDSVDDNLLAALKNLKEGEVTDLIDGDSSYFVARL----DKEVDEDA 298 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRS 310 + + E + + Sbjct: 299 TEETRQSIIEQRKDDLYDETLDGWKE 324 >gi|229044062|ref|ZP_04191750.1| Foldase protein prsA 1 [Bacillus cereus AH676] gi|228725273|gb|EEL76542.1| Foldase protein prsA 1 [Bacillus cereus AH676] Length = 94 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 28/78 (35%), Gaps = 4/78 (5%) Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 + + K ++P T G I + DK++L +K + +++ Sbjct: 1 MKEFEEAAYKLDAGQVSDPVKTTYGYHIIKVTDKKELKPFDEVKDKIRKDIEQQRLQDTT 60 Query: 302 AEY----VKKLRSNAIIH 315 ++ V L +A I Sbjct: 61 GKWKQQVVNDLLKDADIK 78 >gi|242016524|ref|XP_002428837.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting, putative [Pediculus humanus corporis] gi|212513573|gb|EEB16099.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting, putative [Pediculus humanus corporis] Length = 121 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 27/87 (31%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q + +A K ++++ + G ++ + FQ+ + Sbjct: 36 EKQGKCLEALGKLKEGMKFNEVAQQYSED-KARAGGDLGWMTRGSMVGPFQDAAFALPVS 94 Query: 257 -------TTNPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 95 SLSSPVFTDPPVKTKFGYHIIMVEGKK 121 >gi|292490958|ref|YP_003526397.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus halophilus Nc4] gi|291579553|gb|ADE14010.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus halophilus Nc4] Length = 250 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 31/265 (11%), Positives = 73/265 (27%), Gaps = 26/265 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 I+ EVIT K + L + ++E++ + LK ++ G++ ++ + Sbjct: 4 IVRIDDEVITADAFLKTLKLTGR-------FEELIEEMVRDKLKVHAAKRQGVSLTTDEI 56 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 Q R GL + + I+ ++ + + + Sbjct: 57 QERADQFRRVYGLHRAKDMNQFLDAIGVSLDDFENFIIEILYQEKIMAKV-----CSDDA 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + L VL S K + ++ Sbjct: 112 IEEYFRMHSPKFESIELGHIVLDSEG-----------KAKEIFSLLEEEPELFPELAKEH 160 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKG--VEYIAICDKRDLG 279 + G +L L ++ + + P+ + G E + K + Sbjct: 161 SIADTRDHHGMVGKVLRGSLQTDIESKVFNAPVGEPLGPFASSDGSFFEIFQVTAKHEAK 220 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEY 304 + K+ + + E+ Sbjct: 221 LDEETKSEVRRLVVDDWLSTQAQEH 245 >gi|223999243|ref|XP_002289294.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220974502|gb|EED92831.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 118 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 24/85 (28%), Gaps = 4/85 (4%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ 254 ++ +E + K N + + S GK + P F + + Sbjct: 31 DAEKRLTDMKKEIKQDYNKFKNLAKMHSKCPSGKSAGGKLGKFKPGMMVPPFDKAIFAKE 90 Query: 255 ---NNTTNPYVTQKGVEYIAICDKR 276 P T G I I ++ Sbjct: 91 SKVGEVIGPVQTNFGWHLIWIEERE 115 >gi|89072826|ref|ZP_01159383.1| peptidyl-prolyl cis-trans isomerase C [Photobacterium sp. SKA34] gi|89051348|gb|EAR56803.1| peptidyl-prolyl cis-trans isomerase C [Photobacterium sp. SKA34] Length = 108 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 24/91 (26%), Gaps = 16/91 (17%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF------------ 246 ++ D E + K +K ++ G + + PQF Sbjct: 15 KELADDILEQLKKGAKFQELAKKHSTCPSGKKGGDLGEFRKGAMVPQFDKAVFSGKAIST 74 Query: 247 ----QNLLKKSQNNTTNPYVTQKGVEYIAIC 273 + + P T+ G I + Sbjct: 75 SEALKKKNNNLRGLIPEPVKTKFGWHIIKVL 105 >gi|38679892|ref|NP_006214.2| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 isoform 1 [Homo sapiens] Length = 156 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E + +++ G ++ + FQ Sbjct: 75 KIMEAMEKLKSGMRFNEVAAQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDK 133 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 134 PVFTDPPVKTKFGYHIIMVEGRK 156 >gi|331005209|ref|ZP_08328603.1| Peptidyl-prolyl cis-trans isomerase ppiD [gamma proteobacterium IMCC1989] gi|330420991|gb|EGG95263.1| Peptidyl-prolyl cis-trans isomerase ppiD [gamma proteobacterium IMCC1989] Length = 635 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 23/235 (9%), Positives = 68/235 (28%), Gaps = 15/235 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + I +V + + + + ++G +IT+ D+ I Sbjct: 1 MLQGMRNKTKGLTAVFLIGLLTIPLALVGVENLFYGSSTVGEAAEVDGTIITERDVQLAI 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + + + + L + + L+ TL EK +TF ++ V Sbjct: 61 SRERQRLQSQFGENLPADFFTDERLRESVMSSLVQRTLMINIAEKGDMTFSDTEIDKTIV 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 D FL + + + D++ N + Sbjct: 121 DLPIFQLEGNFDQQRFLQGVRNLGHTPASFRT--LLKNDLLANQMQNAIVASDFITDKEI 178 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + +++ + V + + + ++ + ++ + ++ Sbjct: 179 DSVVSLSRQTRDFSYVTLPLGELPQEMTVSDEEISTRYDLNKNQYLSTEEVAIEY 233 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 26/260 (10%), Positives = 67/260 (25%), Gaps = 12/260 (4%) Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 A + N L ++ + S ++ T ++ +V E Sbjct: 148 ASFRTLLKNDLLANQMQNAIVASDFITDKEIDSVVSLSRQTRDFSYVTL-----PLGELP 202 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI---PANKQKMKNITVRE 177 + +V L ++E +I Q+ + V Sbjct: 203 QEMTVSDEEISTRYDLNKNQYLSTEEVAIEYIELNVASIEKDITITDEAIQQQYDSIVAS 262 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY 236 Y T + + Q++I +E +++ + G Sbjct: 263 YNATTQREAAHIMIEGDNEAAQQKIISVKEQLASGADFSALASEYSDDFGTRDNGGNLGV 322 Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNT 293 F+ L ++ + +I + ++ + K + ++ Sbjct: 323 SAGDGFPEAFEEALLSLTEGQVSEAVEIDGATHFIKLIALTEKTAPTFDSQKIKIESELK 382 Query: 294 PTKIEKHEAEYVKKLRSNAI 313 + E+ ++ L A Sbjct: 383 RAQAEEQFILDLQTLEELAY 402 >gi|300175738|emb|CBK21281.2| unnamed protein product [Blastocystis hominis] Length = 155 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 16/53 (30%), Gaps = 1/53 (1%) Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 EK + G + + F++ + +N T GV I Sbjct: 14 AEKESDCSSAKRGGDLGFFKRGQMQKPFEDCAFRLKVGEISNIIETDSGVHII 66 >gi|148657502|ref|YP_001277707.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseiflexus sp. RS-1] gi|148569612|gb|ABQ91757.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseiflexus sp. RS-1] Length = 520 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 15/215 (6%), Positives = 48/215 (22%), Gaps = 22/215 (10%) Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 E + H + + ++ + + + Sbjct: 250 YDEYVNEMRRVDPQRRIHLTLDDFRRGLSNQFLRQALTRRVQEQLVPDSTFTPSADPSAI 309 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-----S 230 I + + + + E+ L + + A + + + Sbjct: 310 ETRHILLKVTVPITATEEEREQAFAARRAEAEALLAEARAAADFGELARERSEDYNTRAA 369 Query: 231 IGKAQYLLESD--------LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 G + + S+N P T G + + +R + Sbjct: 370 GGALPSFDKDGKTPDGTQIDPALVAAIANASENEIVGPVRTSFGWHIVQLV-RRTVDSRE 428 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 A + ++++ R+ + + Sbjct: 429 TQLNRARA--------EAFERWLEEQRAAVSVQRF 455 >gi|255690565|ref|ZP_05414240.1| peptidyl-prolyl cis-trans isomerase [Bacteroides finegoldii DSM 17565] gi|260624026|gb|EEX46897.1| peptidyl-prolyl cis-trans isomerase [Bacteroides finegoldii DSM 17565] Length = 515 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 19/278 (6%), Positives = 65/278 (23%), Gaps = 38/278 (13%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94 ++A + + +NG ++ + Sbjct: 18 AFAQENPVLMRVNGREVSRSEFE------------------------------YSYHHYR 47 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 + + E + ++ I+ + +V Sbjct: 48 AGGGRDLSPKEYALLFSQAIQKVEAAKAIRLDTTAAFRKQQEENRIKLMEDCLVDKQ--- 104 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + ++ + + + +P +K D+ +R Sbjct: 105 --TVDSCVRVSYQKMALKARTGQVQVMQIFKYLPQTITSRHLEEEKARMDSIYQAIRNQP 162 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274 + D L + S+ + P+ T G+ + + D Sbjct: 163 GLDFSALVKCYSDDRQNRWIGGLQTT--VEFENIAFALSKGEISEPFFTPAGIHILKVMD 220 Query: 275 KRDLGGEIALKAYLSAQNT-PTKIEKHEAEYVKKLRSN 311 +++L + + + + + +++L+ Sbjct: 221 RKELPVYEDVVDGIVQRILHKEIRNQGIGKVIERLKRE 258 >gi|82751495|ref|YP_417236.1| peptidyl-prolyl cis-isomerase [Staphylococcus aureus RF122] gi|258423118|ref|ZP_05686012.1| peptidyl-prolyl cis-isomerase [Staphylococcus aureus A9635] gi|283770925|ref|ZP_06343817.1| foldase prsA [Staphylococcus aureus subsp. aureus H19] gi|123548081|sp|Q2YTZ6|PRSA_STAAB RecName: Full=Foldase protein prsA; Flags: Precursor gi|82657026|emb|CAI81463.1| probable peptidyl-prolyl cis-isomerase [Staphylococcus aureus RF122] gi|257846682|gb|EEV70702.1| peptidyl-prolyl cis-isomerase [Staphylococcus aureus A9635] gi|283461072|gb|EFC08162.1| foldase prsA [Staphylococcus aureus subsp. aureus H19] gi|283471112|emb|CAQ50323.1| foldase protein PrsA [Staphylococcus aureus subsp. aureus ST398] gi|298695109|gb|ADI98331.1| probable peptidyl-prolyl cis-isomerase [Staphylococcus aureus subsp. aureus ED133] Length = 320 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 86/309 (27%), Gaps = 27/309 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K++ V + + + + + A S+ +I+ +A + ++ Sbjct: 1 MKMINKLIVPVTASALLLGACGASATDSK-----ENTLISSKAGDVTVADTMKKIGKDQI 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + E++ + L +K + ++ + + G + + + Sbjct: 56 ANASFTEMLNKIL----ADKYKNKVNDKKIDEQIEKMQKQYGGKDKFEKALQQQ-----G 106 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K K + EI + LI+ L Sbjct: 107 LTADKYKENLRTAAYHKELLSDKIKISDSEIK-----EDSKKASHILIKVKSKKSDKEGL 161 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-L 250 ++ QK + +E K +K + G+ Y+L+ F+ Sbjct: 162 DDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKALF 221 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE---KHEAEYVKK 307 K ++ + G I + K L + K++ K + K Sbjct: 222 KLKDGEVSDVVKSSFGYHIIKAD---KPTDFNSEKQSLKEKLVDQKVQKNPKLLTDAYKD 278 Query: 308 LRSNAIIHY 316 L + + Sbjct: 279 LLKEYDVDF 287 >gi|269104517|ref|ZP_06157213.1| peptidyl-prolyl cis-trans isomerase PpiC [Photobacterium damselae subsp. damselae CIP 102761] gi|268161157|gb|EEZ39654.1| peptidyl-prolyl cis-trans isomerase PpiC [Photobacterium damselae subsp. damselae CIP 102761] Length = 108 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 25/91 (27%), Gaps = 16/91 (17%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF------------ 246 ++ D E + K + +K ++ G + + PQF Sbjct: 15 KELADDILEQLKKGAKFQDLAKKHSTCPSGKKGGDLGEFRKGAMVPQFDKAVFSGKAIST 74 Query: 247 ----QNLLKKSQNNTTNPYVTQKGVEYIAIC 273 + + P T+ G I + Sbjct: 75 SQALKLKNNNLRGLIPEPVKTKFGWHVIKVL 105 >gi|116788796|gb|ABK25005.1| unknown [Picea sitchensis] gi|116790870|gb|ABK25769.1| unknown [Picea sitchensis] Length = 123 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 1/112 (0%) Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 ++ A+ +K+ R V + EE K + Sbjct: 8 SQKVRASHLLIKHEGSRRPSSWQDPDGRRIKATTRDAAVAQLSALREEIVSGRAKFEDLA 67 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYI 270 +++ G + F++ ++ T+ GV I Sbjct: 68 ARYSDCKSAKKGGDLGPFGRGQMQKPFEDATYLLKVGEISDIVDTESGVHII 119 >gi|168052231|ref|XP_001778554.1| predicted protein [Physcomitrella patens subsp. patens] gi|162670008|gb|EDQ56584.1| predicted protein [Physcomitrella patens subsp. patens] Length = 119 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 7/76 (9%), Positives = 18/76 (23%), Gaps = 1/76 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 V + + + + K + G + + F+ Sbjct: 40 DAVAQLQQFKSDIESGKSTLADLASKNSDCSSAKRGGDLGWFGRGQMQEPFEKAAFALKV 99 Query: 255 NNTTNPYVTQKGVEYI 270 ++ T+ G I Sbjct: 100 GELSDIIDTESGSHII 115 >gi|241153259|ref|XP_002407024.1| peptidyl-prolyl cis-trans isomerase, putative [Ixodes scapularis] gi|215494006|gb|EEC03647.1| peptidyl-prolyl cis-trans isomerase, putative [Ixodes scapularis] Length = 176 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 10/109 (9%), Positives = 22/109 (20%), Gaps = 1/109 (0%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + R + + + E+ +F Sbjct: 64 AKGQVWCSHLLVKHRDSRRPSSWREEKITRSKEEALDIIKGYREQIASGKATFEELATQF 123 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + + G + F+ + + P T GV I Sbjct: 124 SDCSSAKNKGDLGTFGRGAMQKPFEEAAFALNVGELSEPVFTDSGVHLI 172 >gi|15924831|ref|NP_372365.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus subsp. aureus Mu50] gi|15927415|ref|NP_374948.1| hypothetical protein SA1659 [Staphylococcus aureus subsp. aureus N315] gi|21283511|ref|NP_646599.1| hypothetical protein MW1782 [Staphylococcus aureus subsp. aureus MW2] gi|49486658|ref|YP_043879.1| putative peptidyl-prolyl cis-isomerase [Staphylococcus aureus subsp. aureus MSSA476] gi|57650630|ref|YP_186723.1| protein export protein PrsA, putative [Staphylococcus aureus subsp. aureus COL] gi|87162356|ref|YP_494473.1| foldase protein PrsA precursor [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195663|ref|YP_500469.1| protein export protein PrsA [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150394374|ref|YP_001317049.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp. aureus JH1] gi|151221945|ref|YP_001332767.1| peptidyl-prolyl cis/trans-isomerase [Staphylococcus aureus subsp. aureus str. Newman] gi|156980157|ref|YP_001442416.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus subsp. aureus Mu3] gi|161510056|ref|YP_001575715.1| peptidylprolyl isomerase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142176|ref|ZP_03566669.1| peptidylprolyl isomerase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315172|ref|ZP_04838385.1| foldase protein PrsA precursor [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732497|ref|ZP_04866662.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|255006629|ref|ZP_05145230.2| foldase protein PrsA precursor [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793800|ref|ZP_05642779.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus A9781] gi|258413737|ref|ZP_05682010.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus A9763] gi|258420756|ref|ZP_05683695.1| foldase prsA [Staphylococcus aureus A9719] gi|258438417|ref|ZP_05689701.1| peptidyl-prolyl cis/trans-isomerase [Staphylococcus aureus A9299] gi|258443862|ref|ZP_05692201.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus A8115] gi|258447317|ref|ZP_05695464.1| peptidylprolyl isomerase [Staphylococcus aureus A6300] gi|258448200|ref|ZP_05696327.1| peptidyl-prolyl cis/trans-isomerase [Staphylococcus aureus A6224] gi|258452669|ref|ZP_05700668.1| foldase prsA [Staphylococcus aureus A5948] gi|258453367|ref|ZP_05701350.1| foldase prsA [Staphylococcus aureus A5937] gi|262052668|ref|ZP_06024860.1| hypothetical protein SA930_0804 [Staphylococcus aureus 930918-3] gi|269203478|ref|YP_003282747.1| protein export protein PrsA, putative [Staphylococcus aureus subsp. aureus ED98] gi|282895139|ref|ZP_06303358.1| foldase prsA [Staphylococcus aureus A8117] gi|282924172|ref|ZP_06331847.1| foldase prsA [Staphylococcus aureus A9765] gi|282928579|ref|ZP_06336178.1| foldase prsA [Staphylococcus aureus A10102] gi|284024887|ref|ZP_06379285.1| protein export protein PrsA, putative [Staphylococcus aureus subsp. aureus 132] gi|294850269|ref|ZP_06791004.1| foldase prsA [Staphylococcus aureus A9754] gi|295406147|ref|ZP_06815955.1| foldase prsA [Staphylococcus aureus A8819] gi|296276027|ref|ZP_06858534.1| protein export protein PrsA, putative [Staphylococcus aureus subsp. aureus MR1] gi|297207443|ref|ZP_06923880.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297244929|ref|ZP_06928806.1| foldase prsA [Staphylococcus aureus A8796] gi|300911528|ref|ZP_07128973.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp. aureus TCH70] gi|304380557|ref|ZP_07363232.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|46396696|sp|P60747|PRSA_STAAM RecName: Full=Foldase protein prsA; Flags: Precursor gi|46396697|sp|P60748|PRSA_STAAN RecName: Full=Foldase protein prsA; Flags: Precursor gi|46396698|sp|P60749|PRSA_STAAW RecName: Full=Foldase protein prsA; Flags: Precursor gi|56749190|sp|Q6G894|PRSA_STAAS RecName: Full=Foldase protein prsA; Flags: Precursor gi|81694206|sp|Q5HET4|PRSA_STAAC RecName: Full=Foldase protein prsA; Flags: Precursor gi|122540695|sp|Q2G2S6|PRSA_STAA8 RecName: Full=Foldase protein prsA; Flags: Precursor gi|123485269|sp|Q2FFQ5|PRSA_STAA3 RecName: Full=Foldase protein prsA; Flags: Precursor gi|189037914|sp|A7X3U8|PRSA_STAA1 RecName: Full=Foldase protein prsA; Flags: Precursor gi|189037915|sp|A6U2U4|PRSA_STAA2 RecName: Full=Foldase protein prsA; Flags: Precursor gi|189037916|sp|A6QI23|PRSA_STAAE RecName: Full=Foldase protein prsA; Flags: Precursor gi|189037917|sp|A8YY10|PRSA_STAAT RecName: Full=Foldase protein prsA; Flags: Precursor gi|13701634|dbj|BAB42927.1| prsA [Staphylococcus aureus subsp. aureus N315] gi|14247613|dbj|BAB58003.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus subsp. aureus Mu50] gi|21204952|dbj|BAB95647.1| prsA [Staphylococcus aureus subsp. aureus MW2] gi|49245101|emb|CAG43567.1| putative peptidyl-prolyl cis-isomerase [Staphylococcus aureus subsp. aureus MSSA476] gi|57284816|gb|AAW36910.1| protein export protein PrsA, putative [Staphylococcus aureus subsp. aureus COL] gi|87128330|gb|ABD22844.1| foldase protein PrsA precursor [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203221|gb|ABD31031.1| protein export protein PrsA, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|149946826|gb|ABR52762.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp. aureus JH1] gi|150374745|dbj|BAF68005.1| peptidyl-prolyl cis/trans-isomerase [Staphylococcus aureus subsp. aureus str. Newman] gi|156722292|dbj|BAF78709.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus subsp. aureus Mu3] gi|160368865|gb|ABX29836.1| peptidylprolyl isomerase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723778|gb|EES92507.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257787772|gb|EEV26112.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus A9781] gi|257839524|gb|EEV63995.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus A9763] gi|257843360|gb|EEV67770.1| foldase prsA [Staphylococcus aureus A9719] gi|257848461|gb|EEV72452.1| peptidyl-prolyl cis/trans-isomerase [Staphylococcus aureus A9299] gi|257851268|gb|EEV75211.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus A8115] gi|257853904|gb|EEV76860.1| peptidylprolyl isomerase [Staphylococcus aureus A6300] gi|257858439|gb|EEV81315.1| peptidyl-prolyl cis/trans-isomerase [Staphylococcus aureus A6224] gi|257859644|gb|EEV82493.1| foldase prsA [Staphylococcus aureus A5948] gi|257864459|gb|EEV87204.1| foldase prsA [Staphylococcus aureus A5937] gi|259159417|gb|EEW44469.1| hypothetical protein SA930_0804 [Staphylococcus aureus 930918-3] gi|262075768|gb|ACY11741.1| protein export protein PrsA, putative [Staphylococcus aureus subsp. aureus ED98] gi|269941312|emb|CBI49709.1| putative peptidyl-prolyl cis-isomerase [Staphylococcus aureus subsp. aureus TW20] gi|282589788|gb|EFB94873.1| foldase prsA [Staphylococcus aureus A10102] gi|282592967|gb|EFB97969.1| foldase prsA [Staphylococcus aureus A9765] gi|282762483|gb|EFC02624.1| foldase prsA [Staphylococcus aureus A8117] gi|285817521|gb|ADC38008.1| Foldase protein PrsA precursor [Staphylococcus aureus 04-02981] gi|294822885|gb|EFG39319.1| foldase prsA [Staphylococcus aureus A9754] gi|294969144|gb|EFG45165.1| foldase prsA [Staphylococcus aureus A8819] gi|296887906|gb|EFH26802.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178009|gb|EFH37257.1| foldase prsA [Staphylococcus aureus A8796] gi|300887160|gb|EFK82360.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp. aureus TCH70] gi|302751650|gb|ADL65827.1| peptidylprolyl isomerase, PrsA [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340886|gb|EFM06811.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312830213|emb|CBX35055.1| PPIC-type PPIASE domain protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130515|gb|EFT86501.1| peptidylprolyl isomerase [Staphylococcus aureus subsp. aureus CGS03] gi|315196811|gb|EFU27155.1| peptidylprolyl isomerase [Staphylococcus aureus subsp. aureus CGS01] gi|320141309|gb|EFW33154.1| PPIC-type PPIASE domain protein [Staphylococcus aureus subsp. aureus MRSA131] gi|320143563|gb|EFW35343.1| PPIC-type PPIASE domain protein [Staphylococcus aureus subsp. aureus MRSA177] gi|329727671|gb|EGG64127.1| putative foldase protein PrsA [Staphylococcus aureus subsp. aureus 21172] gi|329729514|gb|EGG65916.1| PPIC-type PPIASE domain protein [Staphylococcus aureus subsp. aureus 21189] gi|329732962|gb|EGG69306.1| PPIC-type PPIASE domain protein [Staphylococcus aureus subsp. aureus 21193] Length = 320 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 85/309 (27%), Gaps = 27/309 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K++ V + + + + + A S+ +I+ +A + ++ Sbjct: 1 MKMINKLIVPVTASALLLGACGASATDSK-----ENTLISSKAGDVTVADTMKKIGKDQI 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + E++ + L +K + ++ + + G + + + Sbjct: 56 ANASFTEMLNKIL----ADKYKNKVNDKKIDEQIEKMQKQYGGKDKFEKALQQQ-----G 106 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K K + EI + LI+ L Sbjct: 107 LTADKYKENLRTAAYHKELLSDKIKISDSEIK-----EDSKKASHILIKVKSKKSDKEGL 161 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-L 250 ++ QK + +E K +K + G+ Y+L+ F+ Sbjct: 162 DDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKALF 221 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE---KHEAEYVKK 307 K + + G I + K L + K++ K + K Sbjct: 222 KLKDGEVSEVVKSSFGYHIIKAD---KPTDFNSEKQSLKEKLVDQKVQKNPKLLTDAYKD 278 Query: 308 LRSNAIIHY 316 L + + Sbjct: 279 LLKEYDVDF 287 >gi|226323667|ref|ZP_03799185.1| hypothetical protein COPCOM_01442 [Coprococcus comes ATCC 27758] gi|225207851|gb|EEG90205.1| hypothetical protein COPCOM_01442 [Coprococcus comes ATCC 27758] Length = 347 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 25/311 (8%), Positives = 75/311 (24%), Gaps = 36/311 (11%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK----- 67 +K +L + CI + S + E +T D++ A + + Sbjct: 1 MKKRVVACILAVACIASLNGCGSKFNGQDTVVEVGDEKVT-ADVANFFARYQQAQFETTY 59 Query: 68 ------------------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 + + L + + + ++ + Sbjct: 60 SSYLGDDFWGKEVTDGKTYEENYKDSIMDSLEEMYILDEHKDDYKVSLSDDEEKSIEDAA 119 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + T + + + L +Q + D + E + Sbjct: 120 KKFTDSNDSAAKDAVSGDEKTVKKVLELLTLQKKMETAMTADVDTNVSDEEAAQKKLQYV 179 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + + + ++ D + V+K+ +D ++ + Sbjct: 180 LFSTKTKGSDGKS-----TDMSDDEKAEVKKKAEDFQKDAASAEDFSVFATAVGASAT-- 232 Query: 230 SIGKAQYLLESDLHPQ--FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 + ++ + + K + T+ G + D K Sbjct: 233 ---DLTFDSDTTSPNEDLIKAADKLKEGEVTDVIEADNGYYVAKVVSLLDRDATDTKKES 289 Query: 288 LSAQNTPTKIE 298 + +Q + + Sbjct: 290 IVSQRKSDQYQ 300 >gi|213405975|ref|XP_002173759.1| peptidyl-prolyl cis-trans isomerase pin1 [Schizosaccharomyces japonicus yFS275] gi|212001806|gb|EEB07466.1| peptidyl-prolyl cis-trans isomerase pin1 [Schizosaccharomyces japonicus yFS275] Length = 179 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 7/97 (7%), Positives = 24/97 (24%), Gaps = 1/97 (1%) Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 R + + + ++ R + + G Sbjct: 79 KHNQSRRPSSWKEANITRSKEEAYALAKNFLQQLRSGAVTMSELASRESDCSSAKRGGDL 138 Query: 235 QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + +++ F++ + N ++ + G I Sbjct: 139 GFFGRNEMQKPFEDAAFALNPNQFSDIVESSSGFHII 175 >gi|85702071|ref|NP_001028940.1| peptidylprolyl cis/trans isomerase, NIMA-interacting 1, pseudogene 1 [Mus musculus] gi|74208417|dbj|BAE26396.1| unnamed protein product [Mus musculus] gi|148695780|gb|EDL27727.1| mCG20568 [Mus musculus] gi|187955818|gb|AAI47364.1| Peptidylprolyl cis/trans isomerase, NIMA-interacting 1-like [Mus musculus] gi|187956101|gb|AAI47363.1| Peptidylprolyl cis/trans isomerase, NIMA-interacting 1-like [Mus musculus] Length = 159 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ + + + +F+ Sbjct: 53 CSHLLVKHSQSRRPSSWRQEKITRSKEEALELINGYIRKIKSGEEDFESLASQFSDCSSA 112 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T+ G+ I Sbjct: 113 KARGDLGAFSRGQMEKPFEDASFALRTGEMSGPVFTESGIHII 155 >gi|298368785|ref|ZP_06980103.1| peptidyl-prolyl cis-trans isomerase [Neisseria sp. oral taxon 014 str. F0314] gi|298282788|gb|EFI24275.1| peptidyl-prolyl cis-trans isomerase [Neisseria sp. oral taxon 014 str. F0314] Length = 610 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 31/262 (11%), Positives = 76/262 (29%), Gaps = 11/262 (4%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 + + ++ Q + L+ + IV ++ ++ + F + Sbjct: 131 DQFVEEIRDQFLFQNLQNLVQNGTIVSDVQAAQLVNIAQATRTVRSVTFNPEAFAGQIKV 190 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + D Q + I+ + + K + E+ + Sbjct: 191 DDAILQRYYDANKKDYIIPQAVKIELV--ALTTQALADKQTVSDAELRQ----AFDKLPP 244 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP--KDCNKLEKFASKI-HDVSIGK 233 I +LF + + + K + + ++ ++++ + G Sbjct: 245 RREIAHILFPVAQDASAEERAAAKAEAEKVLAMVKAKPSDFPALAKQYSKDPASASNGGN 304 Query: 234 AQYLLE-SDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 ++ + L +F+N + +N T G I I + +D KA L + Sbjct: 305 LGFMPKDGGLGAEFENAAFSMQKGEISNVVQTAYGYHIIKILNIQDKPVFEQEKAELEKE 364 Query: 292 NTPTKIEKHEAEYVKKLRSNAI 313 K +KL A Sbjct: 365 LKLKKAAAGFNAAKEKLGEAAF 386 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 16/146 (10%), Positives = 41/146 (28%), Gaps = 1/146 (0%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F ++ + LI V S + + I+D D++ + ++ Sbjct: 1 MFHTVEKYKGPAQILLGLIALTFVGFGVSTVANPDSDYIVKVGNQKISDHDLNLAMQNIQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + Q L+ Q ++ GI + V + + + L Sbjct: 61 AS-GGEQPRDAVFQSLLQRAYLTQGAKQMGIAVSQEQIKQIIVDDPSFHDANGKFSQALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKN 150 + + + + +N Sbjct: 120 TQYLNQRRMSEDQFVEEIRDQFLFQN 145 >gi|91218479|ref|ZP_01255419.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Psychroflexus torquis ATCC 700755] gi|91183360|gb|EAS69763.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Psychroflexus torquis ATCC 700755] Length = 704 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 29/280 (10%), Positives = 74/280 (26%), Gaps = 21/280 (7%) Query: 50 VITDGDISKRIALLKLQKINGELEK-----------IAVQELIVETLKKQEIEKSGITFD 98 +T DI I + K + +++ + K ++ + Sbjct: 210 EVTKSDIQNYINVHKERFQQDAKRNLEYVYFEETPSEEDNSFVLDEVTKLTTDEKVEQSE 269 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 + + +E + ++ DV + + Sbjct: 270 GLSNFNTTDNVQEFIAVHSETPYNDNYTFEYNMKGEFALAILELDVNDVYGPYYENESYK 329 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + + ++ T + + + R K Sbjct: 330 ISKLVERTQKADSVKTSHILVTYNGSRVDASVTRTKEEAKVLADSLTDVVRRNSDKFAEL 389 Query: 219 LEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKR 276 +F+S + G+ ++ L P+F + + + T G I + D+ Sbjct: 390 AGEFSSDRQSAENGGQLNWITYGALVPEFNDYVFDEAKVNSYGLVETDFGFHVIYLEDR- 448 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL-RSNAIIH 315 +LK L ++E + + +L RS++ Sbjct: 449 -----TSLKDALKVATVTKRVEP-SEKTLNELYRSSSKFE 482 >gi|57101996|ref|XP_542080.1| PREDICTED: similar to Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (Rotamase Pin1) (PPIase Pin1) [Canis familiaris] Length = 163 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 57 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 116 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 117 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 >gi|114205601|gb|AAI11395.1| PIN4 protein [Homo sapiens] Length = 142 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E + +++ G ++ + FQ Sbjct: 61 KIMEAMEKLKSGMRFNEVAAQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDK 119 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 120 PVFTDPPVKTKFGYHIIMVEGRK 142 >gi|126342882|ref|XP_001372681.1| PREDICTED: similar to cAMP responsive element binding protein 5 [Monodelphis domestica] Length = 183 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-------KS 253 RI +A E + +++ G ++ + FQ Sbjct: 102 RIMEAMEMLKSGVRFNEVASQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGLDK 160 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I I ++ Sbjct: 161 PVYTDPPVKTKFGYHVIMIEGRK 183 >gi|50309377|ref|XP_454696.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643831|emb|CAG99783.1| KLLA0E16567p [Kluyveromyces lactis] Length = 162 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 8/111 (7%), Positives = 34/111 (30%), Gaps = 1/111 (0%) Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 E + + ++ ++ R +N + ++ ++ + + ++ Sbjct: 49 EENPLRVRALHLLIKHKDSRRPASHRNENITITKDEAKEELETYIKRLNGGEPFESLAKE 108 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + G + ++ P F+ + ++ + G+ I Sbjct: 109 RSDCSSAKRGGDLGFFGHGEMQPSFEKAAFALKIDQVSDIVESDSGLHIIK 159 >gi|303245476|ref|ZP_07331760.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ] gi|302493325|gb|EFL53187.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ] Length = 576 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 88/324 (27%), Gaps = 32/324 (9%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + + F L V + + A + + G I D+ R L + Sbjct: 1 MRLAAPSFRGLAVCLLVFFALSALLGGCGRDTAKEPGVVAMVGGAPIRLADVEARYDLGE 60 Query: 65 LQKIN------GELEKI---AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 + L + ++IV L +QE+ + + + + + Sbjct: 61 IGLPEVDNPPVETLRAAYGKVLADMIVARLVRQELARRHESVTEAEIAAVEKRVRAD--Y 118 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + F L ++ I +++ LA + + L+ E +K + Sbjct: 119 PGDSFDRMLLEERIDLARWREMLADRLALEKFTREVLRLEVRVEVTEAADYYKKHIDAFT 178 Query: 176 REYLIR--TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 +R V +K + E R Sbjct: 179 TAPRMRLTRVQGRDGAAVKAALAAYRKSGRKLESLAGRSGITVRDAV------------- 225 Query: 234 AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALK--AYLSA 290 L E +L ++ LK + +T+ G I +R K A + A Sbjct: 226 ---LPEKNLPAPWREALKSLKEGEPTTILTEGGESLFCILQERLPAKVIDPAKAYARVEA 282 Query: 291 QNTPTKIEKHEAEYVKKLRSNAII 314 K K A ++ + I Sbjct: 283 ILAGGKTAKAFAAWLAETLRTTKI 306 >gi|300214306|gb|ADJ78722.1| Foldase protein prsA [Lactobacillus salivarius CECT 5713] Length = 296 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 36/281 (12%), Positives = 82/281 (29%), Gaps = 34/281 (12%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 + I IV A S+ T +G IT+ + + K +Q++I+ Sbjct: 6 LVAISGIVLTFGLAACSKTVATTSGGKITESEYYSSMK-------KTSSGKQVLQQMILN 58 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + ++E N + + S D ++ K + Sbjct: 59 KVLEKEYGSKVSDKKVN----------EQYNTYKKQYGSSFDSVLAQNDMTKSSFKQEIR 108 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++K + ++ A ++ + + L ++ + I Sbjct: 109 SNLLLKEAVKDNTKITDKQLKAQWKEYEPK------------VTVAHILVSKKSTAEDII 156 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYL--LESDLHPQFQNLLKKSQNN--TT 258 + + +K+++ + GK ++ L F+ + TT Sbjct: 157 NKLKEDGSYANFKKLAKKYSTDSSTKNDGGKLAAFDNTDTSLDSTFKKAAFGLKQGSFTT 216 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 P T+ G I G + L +Q +K+ Sbjct: 217 EPVKTEYGYHVIYSIKNPGKGKMSDHTSELKSQIIDSKMSD 257 >gi|188532348|ref|YP_001906145.1| Peptidyl-prolyl cis-trans isomerase C [Erwinia tasmaniensis Et1/99] gi|259906858|ref|YP_002647214.1| Peptidyl-prolyl cis-trans isomerase C [Erwinia pyrifoliae Ep1/96] gi|188027390|emb|CAO95237.1| Peptidyl-prolyl cis-trans isomerase C [Erwinia tasmaniensis Et1/99] gi|224962480|emb|CAX53935.1| Peptidyl-prolyl cis-trans isomerase C [Erwinia pyrifoliae Ep1/96] gi|283476650|emb|CAY72478.1| peptidyl-prolyl cis-trans isomerase C [Erwinia pyrifoliae DSM 12163] Length = 93 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 22/78 (28%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 +K D E + +K ++ G + + P F + + Sbjct: 13 KEEKLALDLLEQLKQGADFEKLAKKHSTCPSGKKGGHLGEFKQGAMVPAFDKVVFSCPLI 72 Query: 256 NTTNPYVTQKGVEYIAIC 273 P TQ G I + Sbjct: 73 EPQGPLHTQFGYHIIKVL 90 >gi|49484083|ref|YP_041307.1| peptidyl-prolyl cis-isomerase [Staphylococcus aureus subsp. aureus MRSA252] gi|257425953|ref|ZP_05602377.1| foldase prsA [Staphylococcus aureus subsp. aureus 55/2053] gi|257428618|ref|ZP_05605016.1| foldase prsA [Staphylococcus aureus subsp. aureus 65-1322] gi|257431255|ref|ZP_05607632.1| foldase prsA [Staphylococcus aureus subsp. aureus 68-397] gi|257433935|ref|ZP_05610293.1| foldase prsA [Staphylococcus aureus subsp. aureus E1410] gi|257436851|ref|ZP_05612895.1| peptidyl-prolyl cis-isomerase [Staphylococcus aureus subsp. aureus M876] gi|282904416|ref|ZP_06312304.1| foldase protein PrsA [Staphylococcus aureus subsp. aureus C160] gi|282906239|ref|ZP_06314094.1| foldase prsA [Staphylococcus aureus subsp. aureus Btn1260] gi|282909157|ref|ZP_06316975.1| foldase prsA [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911464|ref|ZP_06319266.1| foldase prsA [Staphylococcus aureus subsp. aureus WBG10049] gi|282914636|ref|ZP_06322422.1| foldase protein PrsA [Staphylococcus aureus subsp. aureus M899] gi|282919602|ref|ZP_06327337.1| foldase prsA [Staphylococcus aureus subsp. aureus C427] gi|282924982|ref|ZP_06332648.1| foldase prsA [Staphylococcus aureus subsp. aureus C101] gi|283958594|ref|ZP_06376045.1| foldase protein PrsA [Staphylococcus aureus subsp. aureus A017934/97] gi|293503708|ref|ZP_06667555.1| foldase prsA [Staphylococcus aureus subsp. aureus 58-424] gi|293510729|ref|ZP_06669434.1| foldase prsA [Staphylococcus aureus subsp. aureus M809] gi|293537271|ref|ZP_06671951.1| foldase protein PrsA [Staphylococcus aureus subsp. aureus M1015] gi|295428419|ref|ZP_06821048.1| foldase prsA [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590614|ref|ZP_06949252.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp. aureus MN8] gi|56749225|sp|Q6GFL5|PRSA_STAAR RecName: Full=Foldase protein prsA; Flags: Precursor gi|49242212|emb|CAG40919.1| putative peptidyl-prolyl cis-isomerase [Staphylococcus aureus subsp. aureus MRSA252] gi|257271647|gb|EEV03793.1| foldase prsA [Staphylococcus aureus subsp. aureus 55/2053] gi|257275459|gb|EEV06946.1| foldase prsA [Staphylococcus aureus subsp. aureus 65-1322] gi|257278203|gb|EEV08851.1| foldase prsA [Staphylococcus aureus subsp. aureus 68-397] gi|257282028|gb|EEV12165.1| foldase prsA [Staphylococcus aureus subsp. aureus E1410] gi|257284202|gb|EEV14325.1| peptidyl-prolyl cis-isomerase [Staphylococcus aureus subsp. aureus M876] gi|282313348|gb|EFB43744.1| foldase prsA [Staphylococcus aureus subsp. aureus C101] gi|282317412|gb|EFB47786.1| foldase prsA [Staphylococcus aureus subsp. aureus C427] gi|282321817|gb|EFB52142.1| foldase protein PrsA [Staphylococcus aureus subsp. aureus M899] gi|282325159|gb|EFB55469.1| foldase prsA [Staphylococcus aureus subsp. aureus WBG10049] gi|282327421|gb|EFB57716.1| foldase prsA [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331531|gb|EFB61045.1| foldase prsA [Staphylococcus aureus subsp. aureus Btn1260] gi|282596034|gb|EFC00998.1| foldase protein PrsA [Staphylococcus aureus subsp. aureus C160] gi|283790743|gb|EFC29560.1| foldase protein PrsA [Staphylococcus aureus subsp. aureus A017934/97] gi|290920116|gb|EFD97184.1| foldase protein PrsA [Staphylococcus aureus subsp. aureus M1015] gi|291095374|gb|EFE25639.1| foldase prsA [Staphylococcus aureus subsp. aureus 58-424] gi|291466620|gb|EFF09141.1| foldase prsA [Staphylococcus aureus subsp. aureus M809] gi|295127819|gb|EFG57456.1| foldase prsA [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575500|gb|EFH94216.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp. aureus MN8] gi|312437694|gb|ADQ76765.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp. aureus TCH60] gi|315195752|gb|EFU26139.1| putative peptidyl-prolyl cis-isomerase [Staphylococcus aureus subsp. aureus CGS00] Length = 320 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 86/309 (27%), Gaps = 27/309 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K++ V + + + + + A S+ +I+ +A + ++ Sbjct: 1 MKMINKLIVPVTASALLLGACGASATDSK-----ENTLISSKAGDVTVADTMKKIGKDQI 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + E++ + L +K + ++ + + G + + + Sbjct: 56 ANASFTEMLNKIL----ADKYKNKVNDKKIDEQIEKMQKQYGGKDKFKKALQQQ-----G 106 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K K + EI + LI+ L Sbjct: 107 LTADKYKENLRTAAYHKELLSDKIKISDSEIK-----EDSKKASHILIKVKSKKSDKEGL 161 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-L 250 ++ QK + +E K +K + G+ Y+L+ F+ Sbjct: 162 DDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKALF 221 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE---KHEAEYVKK 307 K ++ + G I + K L + K++ K + K Sbjct: 222 KLKDGEVSDVVKSSFGYHIIKAD---KPTDFNSEKQSLKEKLVDQKVQKNPKLLTDAYKD 278 Query: 308 LRSNAIIHY 316 L + + Sbjct: 279 LLKEYDVDF 287 >gi|242374090|ref|ZP_04819664.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus epidermidis M23864:W1] gi|242348215|gb|EES39817.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus epidermidis M23864:W1] Length = 331 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 93/309 (30%), Gaps = 27/309 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +KL+ V + + + + S A S+ + +I+ ++A + + ++ Sbjct: 1 MKLMNKIIVPVTASALLLGACGSNATESK-----DNTLISSKAGDVKVADVMKKIGKEQI 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + ++ + L +K ++ V+ + + G + S + Sbjct: 56 ANTSFNIVLNKILV----DKYKDKVNTKDVDEDIKKEEKQYGGKDQFESMLKQQ-----G 106 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 Q K + K + EI + LI+ S L Sbjct: 107 MSLDDYKEQKKLSAYQKQLLLDKVKVSDKEIK-----DDSKKASHILIKVKSKSSDKEGL 161 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-L 250 ++ +K K +E K +K + G Y+++ + F+ Sbjct: 162 SDKKAKEKAEKIQKEVEKNPSKFGEIAKKESMDSSSAKKDGSLGYVIKGQMVDSFEKALF 221 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH---EAEYVKK 307 K + + T G I K+ L + K++K + K Sbjct: 222 KLKEGQVSKVVKTDYGYHIIKAD---KETDFNKEKSNLKEKIIEQKVQKKPKLLTDAYKD 278 Query: 308 LRSNAIIHY 316 L + + Y Sbjct: 279 LLDDYKVDY 287 >gi|291387204|ref|XP_002710178.1| PREDICTED: protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)-like [Oryctolagus cuniculus] Length = 131 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E K +++ G ++ + FQ Sbjct: 50 KIMEAMEKLKSGMKFSEVAAQYSED-KARQGGNLGWMTRGSMVGPFQEAAFALPVSGMDK 108 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 109 PVFTDPPVKTKFGYHIIMVEGRK 131 >gi|239995521|ref|ZP_04716045.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alteromonas macleodii ATCC 27126] Length = 101 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 33/102 (32%), Gaps = 17/102 (16%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M ++ + +++ F + SY + + T+NGE I+ ++ + Sbjct: 1 MLERIREGSQGPWAMAIIALIVLSFVFAGVGSYL-TSSGTTAVATVNGEEISAQELERAY 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLK 86 + Q + + + + LI E L Sbjct: 60 QNQRAQMESQYGESIAQLFSSEQYLADFRRNVLDRLIAEKLI 101 >gi|156323209|ref|XP_001618381.1| hypothetical protein NEMVEDRAFT_v1g9343 [Nematostella vectensis] gi|156198699|gb|EDO26281.1| predicted protein [Nematostella vectensis] Length = 72 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 7/67 (10%), Positives = 18/67 (26%), Gaps = 1/67 (1%) Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 E+ + + + + + G + + F+ + P T Sbjct: 3 QEQIKSGEATLEDLAKTESDCSSAKNGGDLGFFGRGQMQKPFETATFSLRVGEMSEPVFT 62 Query: 264 QKGVEYI 270 G+ I Sbjct: 63 DSGIHLI 69 >gi|148264051|ref|YP_001230757.1| hypothetical protein Gura_1994 [Geobacter uraniireducens Rf4] gi|146397551|gb|ABQ26184.1| hypothetical protein Gura_1994 [Geobacter uraniireducens Rf4] Length = 585 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 31/291 (10%), Positives = 75/291 (25%), Gaps = 31/291 (10%) Query: 31 VSYKSWAMSSRIRTTI-NGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + R+ I + IT D++ + L + + Sbjct: 313 PGFAQLLKDRRVVVEIKGDKPITVADMA--------------------ESLSQKFFHGID 352 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 G + ++ + L + ++ ++ Sbjct: 353 EAIKGKRINEQKMSALYDIFYARLYLKEAKKLGIDKT--GHYKDRIKDFKDSLLFGMFIQ 410 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + E A K L+R + K + + K K E Sbjct: 411 KVVAPEIKVSDDETKAYYNKHIGDYSTPELLR-IKGLAFTRKEYAEAAIDKLRKGTEYQW 469 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV-E 268 L+ + ++ A + + + L + Q + Y + +G Sbjct: 470 LQANAEGQAAKESAGLLEFSPT----PVTRNGLPEKMQEATAGGKAGEYRLYESPEGFFY 525 Query: 269 YIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + I D + ++ + + K+ + E+ KLR + Y Sbjct: 526 VLLIQDVVPAKPQPLENVQKVIVKKLFNAKLNQAVEEWGVKLRDAYKVQVY 576 Score = 44.7 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 33/278 (11%), Positives = 63/278 (22%), Gaps = 51/278 (18%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKI-----AVQELIVETLKKQEIEKSGITF 97 T+ E +T +++K +A L + + + LI L QE E G Sbjct: 66 VATVGDEQVTLDELNKSLAALHERAGEDKTAGRKKYVTVLNRLINSRLIVQEAESMG--- 122 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + + D+ + L + Sbjct: 123 ----------------------LEELPEVKQKLDDFPRMALKEEL--------------- 145 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 ++ + V +Y V + + K + ++ + N Sbjct: 146 ---KDLQIKSLQPDATEVEKYYKEAVKEWKIKSVKFEKEDDAKELARTVQAGGNFDELVN 202 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 L L + + + + D R Sbjct: 203 TLIDSGKATGTKEGEYV--KARDLLPQVANVVAGMRAGSVSPVIQVGPSYAIFKLEDVRY 260 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN-AII 314 G + Q K + A Y K L A I Sbjct: 261 PAGNAEAQDAAREQALAMKQIEALAAYNKSLTKKYAKI 298 >gi|330830348|ref|YP_004393300.1| peptidyl-prolyl cis-trans isomerase C [Aeromonas veronii B565] gi|328805484|gb|AEB50683.1| Peptidyl-prolyl cis-trans isomerase C [Aeromonas veronii B565] Length = 92 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 26/78 (33%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 +K+ + +E + ++F++ G + D+ F + + K Sbjct: 12 KTEKQCLEIKEKIEKGADFGQMAKRFSTCASAKRSGDLGEFNKGDMVKPFDDAVFKGELL 71 Query: 256 NTTNPYVTQKGVEYIAIC 273 P T+ G I + Sbjct: 72 KVLGPVRTKFGFHLIKVL 89 >gi|302333506|gb|ADL23699.1| peptidylprolyl isomerase, PrsA [Staphylococcus aureus subsp. aureus JKD6159] Length = 320 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 86/309 (27%), Gaps = 27/309 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K++ V + + + + + A S+ +I+ +A + ++ Sbjct: 1 MKMINKLIVPVTASALLLGACGASATDSK-----ENTLISSKAGDVTVADTMKKIGKDQI 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + E++ + L +K + ++ + + G + + + Sbjct: 56 ANASFTEMLNKIL----ADKYKNKVNDKKIDEQIEKMQKQYGGKDKFEKALQQQ-----G 106 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K K + EI + LI+ L Sbjct: 107 LTADKYKENLRTAAYHKELLSDKIKISDSEIK-----EDSKKASHILIKVKSKKSDKEGL 161 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-L 250 ++ QK + +E K +K + G+ Y+L+ F+ Sbjct: 162 DDKEAKQKAEEIQKEVSKNPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKALF 221 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE---KHEAEYVKK 307 K ++ + G I + K L + K++ K + K Sbjct: 222 KLKDGEVSDVVKSSFGYHIIKAD---KPTDFNSEKQSLKEKLVDQKVQKNPKLLTDAYKD 278 Query: 308 LRSNAIIHY 316 L + + Sbjct: 279 LLKEYDVDF 287 >gi|282917109|ref|ZP_06324867.1| foldase prsA [Staphylococcus aureus subsp. aureus D139] gi|282319596|gb|EFB49948.1| foldase prsA [Staphylococcus aureus subsp. aureus D139] Length = 320 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 86/309 (27%), Gaps = 27/309 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K++ V + + + + + A S+ +I+ +A + ++ Sbjct: 1 MKMINKLIVPVTASALLLGACGASATDSK-----ENTLISSKAGDVTVADTMKKIGKDQI 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + E++ + L +K + ++ + + G + + + Sbjct: 56 ANASFTEMLNKIL----ADKYKNKVNDKKIDEQIEKMQKQYGGKDKFEKALQQQ-----G 106 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K K + EI + LI+ L Sbjct: 107 LTADKYKENLRTAAYHKELLSDKIKISDSEIK-----EDSKKASHILIKVKSKKSDKEGL 161 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-L 250 ++ QK + +E K +K + G+ Y+L+ F+ Sbjct: 162 DDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKALF 221 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE---KHEAEYVKK 307 K ++ + G I + K L + K++ K + K Sbjct: 222 KLKDGEVSDVVKSSFGYHIIKAD---KPTDFNSQKQSLKEKLVDQKVQKNPKLLTDAYKD 278 Query: 308 LRSNAIIHY 316 L + + Sbjct: 279 LLKEYDVDF 287 >gi|91794656|ref|YP_564307.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella denitrificans OS217] gi|91716658|gb|ABE56584.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella denitrificans OS217] Length = 92 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 10/70 (14%), Positives = 22/70 (31%) Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263 D + K +K ++ + G + + PQF + + + T Sbjct: 20 DIIKQLQNGAKFDVLAKKHSTCPSAKNGGNLGEFKKGQMVPQFDKVCFSGELIIPHLVKT 79 Query: 264 QKGVEYIAIC 273 + G I + Sbjct: 80 KFGWHVIKVL 89 >gi|315282338|ref|ZP_07870768.1| foldase protein PrsA [Listeria marthii FSL S4-120] gi|313614019|gb|EFR87733.1| foldase protein PrsA [Listeria marthii FSL S4-120] Length = 203 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 40/122 (32%), Gaps = 4/122 (3%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--KSQN 255 + K+ + K + +++++ + G ++ F+ K+ + Sbjct: 58 EATAKEIQTKLKNGEKFADLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALKNTD 117 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-AQNTPTKIEKHEAEYVKKLRSNAII 314 + + + G I + K + G KA + A ++ +KK A I Sbjct: 118 DVSGIVKSTYGYHLIQLVKKTEKGTYEKEKANVKAAYIDSQLTSENMTAALKKELKAANI 177 Query: 315 HY 316 Sbjct: 178 DI 179 >gi|219118821|ref|XP_002180177.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217408434|gb|EEC48368.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 92 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 22/76 (28%), Gaps = 4/76 (5%) Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ---NLLKKSQNNTTNP 260 + L ++F++ G + +F + P Sbjct: 15 EKIRGELAKDSFAKVAQQFSTCPSASQGGSLGSFYPGTMVKEFDAVIFDPETKLGEVVGP 74 Query: 261 YVTQKGVEYIAICDKR 276 TQ G +I + DKR Sbjct: 75 VQTQFGNHFI-VVDKR 89 >gi|157817696|ref|NP_001100171.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Rattus norvegicus] gi|149020551|gb|EDL78356.1| protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 (predicted), isoform CRA_a [Rattus norvegicus] gi|165970767|gb|AAI58868.1| Peptidylprolyl cis/trans isomerase, NIMA-interacting 1 [Rattus norvegicus] Length = 165 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 25/103 (24%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 59 CSHLLVKHSQSRRPSSWRQEKITRSKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 118 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G + F++ + P T G+ I Sbjct: 119 KARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 161 >gi|223043514|ref|ZP_03613559.1| foldase protein PrsA [Staphylococcus capitis SK14] gi|222443002|gb|EEE49102.1| foldase protein PrsA [Staphylococcus capitis SK14] Length = 333 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 97/308 (31%), Gaps = 25/308 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +KL+ V + + + + S A S+ + +I+ ++A + + N ++ Sbjct: 1 MKLMNKIIVPVTASALLLGACGSNATESK-----DNTLISSKAGDVKVADVMKKIGNEQI 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + ++ + L +K D+ V+ + + G + S + D+ Sbjct: 56 ANTSFNIVLNKIL----ADKYKDKVDTKDVDEDIKKEEKQYGGKDQFESMLKQQGMSLDD 111 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + +Q ++ + G + A+ +K + + Sbjct: 112 YKEQKKLSAYQKQLLLDKVKVSDKGIKDNSKKASHILIKVKSKSSDKEGLSDKKAKEKAE 171 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LK 251 + Q V+K E + D + +K G Y+++ + F+ K Sbjct: 172 KIQKEVEKNPSKFGEIAKKESMDSSSAKKD---------GSLGYVIKGQMVDSFEKALFK 222 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH---EAEYVKKL 308 + + T G I K+ L + K++K + K L Sbjct: 223 LKEGQVSKVVKTDYGYHIIKAD---KENDFNKEKSNLKEKIIEQKVQKKPKLLTDAYKDL 279 Query: 309 RSNAIIHY 316 + + Y Sbjct: 280 LDDYKVDY 287 >gi|146282555|ref|YP_001172708.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas stutzeri A1501] gi|145570760|gb|ABP79866.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas stutzeri A1501] Length = 92 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 6/77 (7%), Positives = 19/77 (24%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 + ++ K+++ G + + ++ K Sbjct: 12 KTEAEAAQLKKRLANGEAFDVLARKYSTCPSGKKGGDLGEVRPGQMVRSIDQVIFKKPLR 71 Query: 256 NTTNPYVTQKGVEYIAI 272 P +Q G + + Sbjct: 72 EVHGPVKSQFGYHLVQV 88 >gi|67484012|ref|XP_657226.1| peptidyl-prolyl cis-trans isomerase [Entamoeba histolytica HM-1:IMSS] gi|56474474|gb|EAL51841.1| peptidyl-prolyl cis-trans isomerase, putative [Entamoeba histolytica HM-1:IMSS] Length = 120 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 Q +I +A +++ G +++ + FQ++ + Sbjct: 41 EKQSKILEALAKLEEGKPFSQVATEYSED-KANQGGSLGWVIRGQMCGAFQDVAFNAPVG 99 Query: 256 NTTNPYVTQKGVEYIAICDKR 276 T P+ T G + + +++ Sbjct: 100 KYTQPFKTPFGYHIVLVEERK 120 >gi|167523994|ref|XP_001746333.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775095|gb|EDQ88720.1| predicted protein [Monosiga brevicollis MX1] Length = 140 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 31/111 (27%), Gaps = 8/111 (7%) Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 + +R +L +Q ++ K + ++ S+ S G Sbjct: 30 SGTAVEVRHILCEKHGKCMQALEKLRAAYKPEDGKPQSGLGVWTQVAMEFSEDKARSGGN 89 Query: 234 AQYLLESDLHPQFQNLLKKSQ-----NNTT---NPYVTQKGVEYIAICDKR 276 ++ + FQ+ P T+ G I + ++ Sbjct: 90 LGWMTRGGMVGPFQDTAFSMPITKPSGPVIFTDPPVKTKFGYHIIMVTGRK 140 >gi|255730987|ref|XP_002550418.1| peptidyl-prolyl cis-trans isomerase 1 [Candida tropicalis MYA-3404] gi|240132375|gb|EER31933.1| peptidyl-prolyl cis-trans isomerase 1 [Candida tropicalis MYA-3404] Length = 177 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 9/77 (11%), Positives = 22/77 (28%), Gaps = 1/77 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254 +Q+ K + + K + + G + + + P F+ Sbjct: 98 EAIQQTKKHLAKIKNGEVKLGDLAVTESDCSSHERGGDLGFFSKGQMQPPFEEAAFNLHV 157 Query: 255 NNTTNPYVTQKGVEYIA 271 +N T G+ + Sbjct: 158 GEVSNIVETNSGIHILQ 174 >gi|167383933|ref|XP_001736743.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting [Entamoeba dispar SAW760] gi|165900781|gb|EDR27021.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting, putative [Entamoeba dispar SAW760] Length = 120 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 Q +I +A +++ G +++ + FQ++ + Sbjct: 41 EKQSKILEALAKLEEGKPFSQVATEYSED-KANQGGSLGWVIRGQMCGAFQDVAFNAPVG 99 Query: 256 NTTNPYVTQKGVEYIAICDKR 276 T P+ T G + + +++ Sbjct: 100 KYTQPFKTPFGYHIVLVEERK 120 >gi|45945695|gb|AAH05234.2| PIN4 protein [Homo sapiens] gi|47683021|gb|AAH70288.1| PIN4 protein [Homo sapiens] Length = 140 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E + +++ G ++ + FQ Sbjct: 59 KIMEAMEKLKSGMRFNEVAAQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDK 117 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 118 PVFTDPPVKTKFGYHIIMVEGRK 140 >gi|330684763|gb|EGG96458.1| PPIC-type PPIASE domain protein [Staphylococcus epidermidis VCU121] Length = 330 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 86/313 (27%), Gaps = 31/313 (9%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + F K++ + ++ I + + + + +I Sbjct: 1 MKAFNKIMIPVTASALLLGACGSDATDSKENTLISSKAGDVK-----VEDVMKKIGKDQI 55 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + IA+ +++ + K D+ ++ + + G + S + Sbjct: 56 ASKSFSIALDKILADKYK--------DKVDTKDIDKDIKKEEKQYGGKEQFESVLKQQ-- 105 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 Q K K + EI LI+ Sbjct: 106 ---GMSMDDYKDQKRLSAYQKELLNDKIKVSDKEIK-----DNTKKASHILIKVKSKDSD 157 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQF- 246 L ++ QK + +E K +K + K G Y+ + + F Sbjct: 158 KEGLSDKKAKQKAEEIQKEVSKDPSKFGEIAKKESMDKSSAKKDGSLGYVTKGQMMESFD 217 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE---KHEAE 303 + L K + + T G I + K+ L ++ KI+ K + Sbjct: 218 KALFKLKEGEVSKVVKTDYGYHIIKAD---KETDFNSEKSNLKSKILEQKIQKDPKLLTD 274 Query: 304 YVKKLRSNAIIHY 316 K++ + Y Sbjct: 275 AYKEILDEYKVDY 287 >gi|309789583|ref|ZP_07684164.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oscillochloris trichoides DG6] gi|308228319|gb|EFO81966.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oscillochloris trichoides DG6] Length = 317 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 24/294 (8%), Positives = 74/294 (25%), Gaps = 40/294 (13%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIAL-----LKLQKINGELEKIAVQELIVETL 85 + + ++ + + T D ++R+ + +G+ + Sbjct: 30 GAALQVSATNPQILRVGPDTYTLNDFTQRMQADIGPAIANMIQSGQTREQI-------ET 82 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + + FD+ +Q+AR+ G+ + + + Sbjct: 83 LANDQKVRAGIFDAMVQELLLMQYARSHGIGVDPAQVDANFFSMTRPFDPSDPFASPSAD 142 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 +++ L L A+ + + + A Sbjct: 143 RLMQAQQQLTLEVLARNTRADMFHARMLQ---------------------LASEAEADQA 181 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQ 264 + ++ + + G + +L P+ + NT Sbjct: 182 LADLQAGADFASLAKERSKDLETAPKGGDLGWEPIGNLPPELDSAGFAQALNTPIKIQVG 241 Query: 265 KGVEYIAICDKRDLGGEIALKA-----YLSAQNTPTKI-EKHEAEYVKKLRSNA 312 + + +++ +A L + + + +LR+ A Sbjct: 242 ESWYVFEVLERQAGPNLEDKRAFEDFTQLQQSMGAQQFYTETFIPWYDQLRAAA 295 >gi|323339608|ref|ZP_08079882.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus ruminis ATCC 25644] gi|323093003|gb|EFZ35601.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus ruminis ATCC 25644] Length = 304 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 35/300 (11%), Positives = 83/300 (27%), Gaps = 37/300 (12%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +FV ++ + A S+ T +G +T+ + + K Sbjct: 7 MKKWFVAAASVLMTL---SLAACGSKTVATTSGGKVTESEYYSSLK-------KTSSGKQ 56 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 +QE+I+ + +E + + + ++ + +++ Sbjct: 57 VLQEMILNKILDKEYGDKVTDKKVDAEYNKYKKQYGSSFSTVLAQNNYTKS--------- 107 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 ++ + + + A ++ + + + + Sbjct: 108 -SFKKNIRSSLLLHEALVANTKITDKMLEAQWKEYEPKIT-----------VAHILVAKK 155 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL--LESDLHPQFQNLLKKS 253 + I + ++ EK + GK ++ L F+ K Sbjct: 156 SDAEAIINELKKDGSYKNFAKLAKEKSTDTGTKSNGGKLSAFDNTDTSLDSTFKKAAFKL 215 Query: 254 QNNT--TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + T T P T G I G K L Q K Y++K+ S Sbjct: 216 KQGTFTTEPVKTSYGYHIIYSVKNPGKGKMSDHKKELKDQIINAKASDSS--YMQKILSK 273 >gi|71066028|ref|YP_264755.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter arcticus 273-4] gi|71039013|gb|AAZ19321.1| possible PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter arcticus 273-4] Length = 624 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 22/267 (8%), Positives = 72/267 (26%), Gaps = 19/267 (7%) Query: 58 KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 ++ + K Q ++++ +L + ++ + Sbjct: 138 RQRNMTKNQLFAEFRNQLSLDQLNASIVGTAAYPMKAVSQLIDLQLESRNIWLHRFNW-- 195 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML------KYGNLEMEIPANKQKMK 171 +D+ S + + +V ++ + + E + + Sbjct: 196 QDYVSQVKLNKSDIQAYYDANKDTLKSAAMVDLAYLQLSPQTIQVNEVTKEDLQQQYEAY 255 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 ++ R + + + R + + + + + Sbjct: 256 KQSLAVVDERKISQILLTGSDA-----KARADKVKARLAKGEVFTKLAKTESDDPSGEAG 310 Query: 232 GKAQYLLE----SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD--KRDLGGEIALK 285 G +D + L S + + P T G + + + + +++ Sbjct: 311 GDIGRFNPSVFGNDAAAVEKALEGLSVGDVSVPVKTSFGYQIFTVTEDSGSKIPSLESMR 370 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNA 312 L+A+ K ++ A+ V + A Sbjct: 371 DDLTAKAKEYKRQEVYADKVTAINDLA 397 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 27/229 (11%), Positives = 62/229 (27%), Gaps = 11/229 (4%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 K+ L + + L ++ + SY + + I + + Sbjct: 1 MDKLRDFLKSWPGRILLILCLSPLALLGVESYFGGNVDPNQIAQVGEASIGLSEYQTAVN 60 Query: 62 LLK----------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 + L + ++ LI TL +Q+ K G+T +T+N Q Sbjct: 61 NRRTELLDQVDDASLLNEDVLHEQVLKGLIDRTLLEQQAGKLGMTVSDDTINRLLRQEEI 120 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY-GNLEMEIPANKQKM 170 G E + N K L + + ++ Sbjct: 121 FKGEDGEFSNDQFASFLRQRNMTKNQLFAEFRNQLSLDQLNASIVGTAAYPMKAVSQLID 180 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + R + + ++++ + DA + L+ + Sbjct: 181 LQLESRNIWLHRFNWQDYVSQVKLNKSDIQAYYDANKDTLKSAAMVDLA 229 >gi|45185568|ref|NP_983284.1| ACL120Wp [Ashbya gossypii ATCC 10895] gi|44981286|gb|AAS51108.1| ACL120Wp [Ashbya gossypii ATCC 10895] Length = 163 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 7/87 (8%), Positives = 24/87 (27%), Gaps = 1/87 (1%) Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 ++ ++ ++ E + + + + G ++ P Sbjct: 74 HRNEHITLDKAAAVAELEQYAERYRQGERFEELARERSDCSSYKRGGDLGTFGRGEMQPS 133 Query: 246 FQNLLKKSQ-NNTTNPYVTQKGVEYIA 271 F+ + ++ + GV I Sbjct: 134 FEKVAFALPVGGVSDVVESDSGVHLIK 160 >gi|329923364|ref|ZP_08278848.1| conserved domain protein [Paenibacillus sp. HGF5] gi|328941456|gb|EGG37748.1| conserved domain protein [Paenibacillus sp. HGF5] Length = 363 Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 35/349 (10%), Positives = 100/349 (28%), Gaps = 36/349 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K F SL +++ ++ ++ T++G I + + I Sbjct: 4 MVHK-FCSLKWLFIAGFFILIVVTILLIAKPAFTQTHHEDAYIATVDGVEIHVSEFQRAI 62 Query: 61 ALLKL--------------------------QKINGELEKIAVQELIVET--LKKQEIEK 92 + + ++K A+++ I + + + Sbjct: 63 DANRAGIIKYFHEKYDAAPSAAFWTTPYGGNEIPLELIKKKALEDSINQKIRQILAKEQG 122 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI---WPDVVK 149 F + + ++ + + +Y+ ++ +++ Sbjct: 123 VLPDISYAGFMQNFNLENQRRQQAIKNHQVIFGPAQYTEEAYYEYVLANTVLSVKNHLME 182 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 +D+ L ANK+++ + + + L + N+ + + + E +R Sbjct: 183 HDWKPSEQQLITFYEANKRRLYHAPATVKVRQLSLSFLDANRNVDTLLKTQEKRKIETAR 242 Query: 210 LRLPKDCNKLEKFASKIHDV----SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 ++ + + D + + P Q + Sbjct: 243 EKISSGVSFEQAVKDIKQDDRVTEQVYNLDSYRHNVRSPVAQASADLLPGEVSEIIEENG 302 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + +K LG + + Q I+ EYV++ ++A + Sbjct: 303 SFYLMLCMEKDQLGSKYLGFDGIREQVLKDYIDNQYEEYVRQRLTDAKV 351 >gi|251795790|ref|YP_003010521.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. JDR-2] gi|247543416|gb|ACT00435.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp. JDR-2] Length = 343 Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 29/327 (8%), Positives = 78/327 (23%), Gaps = 31/327 (9%) Query: 18 TYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLK------------ 64 + V + S S T+ G+ I+ + + K Sbjct: 8 VLLLASAGLAVAWPQPTGGSPSGSEAIATVGGQPISLDEFRLYMDKAKGEVTNYFSVTYG 67 Query: 65 -------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 ++ L+K A+++ + + ++G+ ++ F Sbjct: 68 AEDRKDYWTSAFGGERPIDRLKKQAMKDAVEGKTLQLLAVENGLAES-SSFADFTRNWND 126 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 N A+D G+G+ Q+ + + + + + + Sbjct: 127 NNQSRAKDLKQGKAIYGLGEYDLSQFYFYSISNLKLDLAEKLGERELKVTDQELLDRYQS 186 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 + T + K+I +A++ +K+ + Sbjct: 187 HAEFAGQTQLTYKELSIPFGDGEREQAYKQITEAQQELKAGLSFEEAAKKYTENGLRDNT 246 Query: 232 GKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 Q + + G I + ++ + Sbjct: 247 VIIGGQDSPLQADAVLKQAAARLEIGEYSPVLDCGSGFSIIRLVNR--TDNFSVPLDSVK 304 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 AQ ++ Y+ + Sbjct: 305 AQLQEEVLQLKFQAYLADQVKKRNVQI 331 >gi|221103350|ref|XP_002155257.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 149 Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 7/125 (5%), Positives = 25/125 (20%), Gaps = 1/125 (0%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 + + + + R + + + + Sbjct: 21 YFNTETNESQWEKPDNEEFQVRASHLLVKHKGSRRPSSWKQNVITRTEEEALDIIKNYHK 80 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + + + + G + + F+ N + P + Sbjct: 81 QITSGKTTLAALAQSESDCNSGKNGGDLGFFGPGQMQKSFEEAAFALKINEMSGPVYSDS 140 Query: 266 GVEYI 270 G+ I Sbjct: 141 GIHLI 145 >gi|255935639|ref|XP_002558846.1| Pc13g04100 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583466|emb|CAP91479.1| Pc13g04100 [Penicillium chrysogenum Wisconsin 54-1255] Length = 174 Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 12/164 (7%), Positives = 34/164 (20%), Gaps = 1/164 (0%) Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 S F + + +N + E + Sbjct: 10 WEVRHSNSKNLPYYFNPSTKESRWEPPAETDTDKLKVYMAQNHTPAARPDPSGEGEGKIR 69 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + D + ++ + + + + Sbjct: 70 CSHLLVKHRDSRRPSSWREADITRTKEEAIEILKGHEQRIQSGETTLGDLAVAESDCSSA 129 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ +F++ ++ T GV I Sbjct: 130 RKKGDLGFFGRGEMQKEFEDAAFGLQPGQVSSVIETASGVHLIE 173 >gi|227510549|ref|ZP_03940598.1| peptidylprolyl isomerase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190201|gb|EEI70268.1| peptidylprolyl isomerase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 293 Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 35/280 (12%), Positives = 80/280 (28%), Gaps = 37/280 (13%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 +I ++S+ A S+ T NG IT+ K +Q++I+ Sbjct: 5 LIVLAGVLMSFTLAACGSKSVATTNGGKITES-------AYYSSLKGTSSGKQVLQQMIL 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + +++ K + VN F ++ + G S + L Sbjct: 58 NKVLEKQYGKK---VKDSAVNKDFNKYKKQYGSSFNAVL-------QQNGMTASQLKDSI 107 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 +++ + ++ A + + +L S ++ Sbjct: 108 RSNLLLQQAVRDNTKFTDAQLKA----QFKSYQPKVTVNQILVSKKSTAETVIKQLKA-- 161 Query: 203 KDAEESRLRLPKDCNKLEKFASK-IHDVSIGKA---QYLLESDLHPQFQNLLKKSQNNTT 258 + +K+++ G+ S + K + T Sbjct: 162 ---------GKSFSSLAKKYSTDTATKNKGGRISAFDNTNTSLDSNFKKAAFKLKNGDYT 212 Query: 259 N-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 P TQ G + I + + G ++ L Q ++ Sbjct: 213 KTPVKTQYGYQVIQMVNHPAKGTYKDHESELKTQLVDKRL 252 >gi|150020160|ref|YP_001305514.1| hypothetical protein Tmel_0255 [Thermosipho melanesiensis BI429] gi|149792681|gb|ABR30129.1| hypothetical protein Tmel_0255 [Thermosipho melanesiensis BI429] Length = 328 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 32/319 (10%), Positives = 73/319 (22%), Gaps = 35/319 (10%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITD----------------GDISKRIALLKLQKING- 70 + + S+ ++ +N EVIT I + + G Sbjct: 12 ISVFSFSEQLPATSTVAIVNEEVITLETLNSVADVQKLMVSISQIDQTFFNILSNTEEGI 71 Query: 71 ----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 ++ +++L+ + L Q EK V + N + Sbjct: 72 KVILRYKRAILEQLVDKYLIVQFAEKYNARPSDEEVKQLVDEQLSNYLRDQGIDE---ET 128 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + + L NL + + + Y ++ Sbjct: 129 FNFYLEYANMGSLEDFKKRMYLNTLVNLSIENLYKAVTKDATITVSEARDYYEKNIDKYA 188 Query: 187 IPDNKLQNQGFV--QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 P + +D + ++ + L L Sbjct: 189 TPTQYDLYLLKLSSDSVARDVKNRISGGESFEKVAKELGIDKYFYEGLSEGEELSQKL-- 246 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDK---RDLGGEIALKAYLSAQNTPTKI---E 298 + + + P + G I R E + + K Sbjct: 247 -WMYIKNAPEGAILGPIDDKNGFYLFKILKIIPMRSKPFEEVKHDIIEEMLSSKKSTIWS 305 Query: 299 KHEAEYVKKLRSNAIIHYY 317 + + KK + + + Y Sbjct: 306 EFIDKEFKKFKEESDVKIY 324 >gi|114571246|ref|YP_757926.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Maricaulis maris MCS10] gi|114341708|gb|ABI66988.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Maricaulis maris MCS10] Length = 277 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 16/186 (8%), Positives = 56/186 (30%), Gaps = 10/186 (5%) Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR------EYLIRTVLFSIPDNKL 192 ++ +++ ++ E + + ++ N + +L + + Sbjct: 78 RPEAPDDSLIRVMLDVEVKTPEPDEASCRRYYDNNREKLRAPDLYEPAHILLQADRRDAP 137 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 + + + E + + + G+ ++ P F+ +L + Sbjct: 138 AFERALAEARTLLETLSEKPDLFARMARDRSDCVSATEGGRLGQVMRGQTTPAFEAVLAQ 197 Query: 253 SQNNTT--NPYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 Q P T GV I + + ++ + + + +++V + Sbjct: 198 MQAGAIHPEPVETPYGVHIIRLDHAVRGNIPEFAQARPLVEEFLRDASWRRAVSQFVSLV 257 Query: 309 RSNAII 314 +A + Sbjct: 258 IGDAEV 263 >gi|118590091|ref|ZP_01547494.1| hypothetical protein SIAM614_11273 [Stappia aggregata IAM 12614] gi|118437063|gb|EAV43701.1| hypothetical protein SIAM614_11273 [Stappia aggregata IAM 12614] Length = 132 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 2/118 (1%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIEKSGITFDS 99 I+ +N ITD DIS+R L+ + + +K A +EL+ + +K E E+ GI Sbjct: 14 IKIIVNDVPITDYDISQRARLITMTQRKSASIAKKQAEEELVDDQVKLAEAERVGIDVSK 73 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + V+ F ARN +S S L G+ + K+ L Q W V+++ F + Sbjct: 74 SEVDNAFNNIARNVKMSPAQLSKALRSGGVQPDTLKERLKAQLAWNQVLRSRFSGRIE 131 >gi|62739712|gb|AAH93700.1| Protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Homo sapiens] gi|85567709|gb|AAI12282.1| Protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Homo sapiens] gi|313883986|gb|ADR83479.1| protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [synthetic construct] Length = 156 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E + +++ G ++ + FQ Sbjct: 75 KIMEAMEKLKSGMRFNEVAAQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDK 133 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 134 PVFTDPPVKTKFGYHIIMVEGRK 156 >gi|301166294|emb|CBW25869.1| peptidyl-prolyl cis-trans isomerase [Bacteriovorax marinus SJ] Length = 90 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 6/66 (9%), Positives = 14/66 (21%), Gaps = 1/66 (1%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + +++ G + + F+ + TQ Sbjct: 22 KKIEEGKTFEELARDYSNCPSGKDGGSLGSFGKGMMVKPFEQAAFALKVGEVSGAVRTQF 81 Query: 266 GVEYIA 271 G I Sbjct: 82 GYHLIK 87 >gi|329957339|ref|ZP_08297859.1| hypothetical protein HMPREF9445_02737 [Bacteroides clarus YIT 12056] gi|328523052|gb|EGF50155.1| hypothetical protein HMPREF9445_02737 [Bacteroides clarus YIT 12056] Length = 510 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 25/294 (8%), Positives = 79/294 (26%), Gaps = 48/294 (16%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL-QKINGELEKIAVQELIVE 83 + +S+ ++ + I G+ + + K + + + Sbjct: 1 MMVFLGLSWSVFSQQDPVLMRIGGKDVLRSEFEYNYNRDKASLAPKDAAPEKYAERFVNF 60 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 LK + D ++ Sbjct: 61 KLKVAA-----------------------------------AEAAGLDTALAFRERVEGY 85 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++K+ + + + + + +P N Sbjct: 86 RSRLIKSYLTDTVVTEKAARRLYDKMKSGHRAGQVRVSHIFKYLPQNVSGAALRDAVARM 145 Query: 204 DAEESRLRLPKDCNKL----EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT 258 D+ L+ D E+F+ + + + +F++++ S + Sbjct: 146 DSIYEYLQRNPDSEAFDSCVERFSDEKQAFRVSWL------QMPVEFEDVVFGLSAGEMS 199 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSN 311 P+ T +G+ + + ++ ++ ++K L + + ++ V+KL+ Sbjct: 200 QPFFTPQGIHIVKVLERLEMPSFESVKEELMARRAHRHGVDSGAEAQVEKLKKE 253 >gi|297670993|ref|XP_002813636.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like [Pongo abelii] Length = 157 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E + +++ G ++ + FQ Sbjct: 76 KIMEAMEKLKSGMRFNEVAAQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDK 134 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 135 PVFTDPPVKTKFGYHIIMVEGRK 157 >gi|226953081|ref|ZP_03823545.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase) [Acinetobacter sp. ATCC 27244] gi|226836173|gb|EEH68556.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase) [Acinetobacter sp. ATCC 27244] Length = 623 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 26/234 (11%), Positives = 66/234 (28%), Gaps = 6/234 (2%) Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 L+ ++ +Q + + + + S ++ + + +K Sbjct: 167 NALVSKSDLQQLANLQTEQRTLHLASIKLDDYKKGVTASTQEITDYYNKHKNEFKQVASV 226 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 + + L + +++ K + ++ +L ++ Sbjct: 227 DVDYVVLSPALLEQANLAVTDADLQQAYAAFVEKQQQSVKREVKHIL---VTTDERDDAA 283 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ--YLLESDLHPQFQNLLKKSQN 255 QK I D +++ + G Y + + Sbjct: 284 AQKLINDVYAKIQSGMTFAQAASQYSEDPSSKNQGGLVSAYAPGAFSADFDNAVNTLKNG 343 Query: 256 NTTNPYVTQKGVEYIAI-CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + P TQ G I + ++ + KA L+A+ TK ++ V L Sbjct: 344 QVSKPVKTQYGYHIIEVQVPTVNIPSFESEKARLTAEVEKTKAANLFSDTVNNL 397 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 34/320 (10%), Positives = 92/320 (28%), Gaps = 23/320 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 T + ++ + L +V I Y S + + ++NG+ I++ ++ I Sbjct: 1 MESFRTVIKGWLGKVLLVLFLTPLALVGIEGYFSGGNKADVAKSVNGQDISNKELESAIK 60 Query: 62 LLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQ 108 K Q +++ A+ L+ +L Q+ EK GI+ + Sbjct: 61 NYKDQYLALVQGDESLLNLSAIQERAMDALVARSLLSQQAEKLGISLSDAQLEQMLAQQP 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + G ++ + N Q ++ + + + ++ Sbjct: 121 SFQQNGQFSQQLYENYLRSVGLTNQALISSLRQDHALKMISSSLIDNALVSKSDLQQLAN 180 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 L + + + ++ + + + Sbjct: 181 LQTEQRTLHL-ASIKLDDYKKGVTASTQEITDYYNKHKNEFKQVASVDVDYVVLSPALLE 239 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + + ++DL + ++K Q + + D+RD L + Sbjct: 240 QANLA---VTDADLQQAYAAFVEKQQQSVKREVK-----HILVTTDERDDAAAQKLINDV 291 Query: 289 SAQNTPTK-IEKHEAEYVKK 307 A+ + ++Y + Sbjct: 292 YAKIQSGMTFAQAASQYSED 311 >gi|314934005|ref|ZP_07841370.1| foldase protein PrsA [Staphylococcus caprae C87] gi|313654155|gb|EFS17912.1| foldase protein PrsA [Staphylococcus caprae C87] Length = 333 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 96/308 (31%), Gaps = 25/308 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +KL+ V + + + + S A S+ + +I+ ++A + + N ++ Sbjct: 1 MKLMNKIIVPVTASALLLGACGSNATESK-----DNTLISSKAGDVKVADVMKKIGNEQI 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + ++ + L +K D+ V+ + + G + S + D+ Sbjct: 56 ANTSFNIVLNKIL----ADKYKDKVDTKDVDEDIKKEEKQYGGKDQFESILKQQGMSLDD 111 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + +Q ++ + + A+ +K + + Sbjct: 112 YKEQKKLSAYQKQLLLDKVKVSDKNIKDNSKKASHILIKVKSKSSDKEGLSDKKAKEKAE 171 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LK 251 + Q V+K E + D + +K G Y+++ + F+ K Sbjct: 172 KIQKEVEKNPSKFGEIAKKESMDSSSAKKD---------GSLGYVIKGQMVDSFEKALFK 222 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH---EAEYVKKL 308 + + T G I K+ L + K++K + K L Sbjct: 223 LKEGQVSKVVKTDYGYHIIKAD---KENDFNKEKSNLKEKIIEQKVQKKPKLLTDAYKDL 279 Query: 309 RSNAIIHY 316 + + Y Sbjct: 280 LDDYKVDY 287 >gi|321479467|gb|EFX90423.1| hypothetical protein DAPPUDRAFT_299806 [Daphnia pulex] Length = 130 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 27/87 (31%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK---- 252 Q +I +A E K ++ S G +++ + FQ Sbjct: 45 EKQSKILEALEKLKAGMKFNEVAATYSED-KARSGGDLGWMVRGSMVGPFQEAAFALPIS 103 Query: 253 ---SQNNTTNPYVTQKGVEYIAICDKR 276 + T P T+ G I + K+ Sbjct: 104 SLGNPVYTDPPVKTKFGYHIIMVEGKK 130 >gi|294650670|ref|ZP_06728024.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter haemolyticus ATCC 19194] gi|292823461|gb|EFF82310.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter haemolyticus ATCC 19194] Length = 623 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 26/234 (11%), Positives = 66/234 (28%), Gaps = 6/234 (2%) Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 L+ ++ +Q + + + + S ++ + + +K Sbjct: 167 NALVSKSDLQQLANLQTEQRTLHLASIKLDDYKKGVTASTQEITDYYNKHKNEFKQVASV 226 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 + + L + +++ K + ++ +L ++ Sbjct: 227 DVDYVVLSPALLEQANLAVTDADLQQAYAAFVEKQQQSVKREVKHIL---VTTDERDDAA 283 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ--YLLESDLHPQFQNLLKKSQN 255 QK I D +++ + G Y + + Sbjct: 284 AQKLINDVYAKIQSGMTFAQAASQYSEDPSSKNQGGLVSAYAPGAFSADFDNAVNTLKNG 343 Query: 256 NTTNPYVTQKGVEYIAI-CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + P TQ G I + ++ + KA L+A+ TK ++ V L Sbjct: 344 QVSKPVKTQYGYHIIEVQVPTVNIPSFESEKARLTAEVEKTKAANLFSDTVNNL 397 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 35/320 (10%), Positives = 92/320 (28%), Gaps = 23/320 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 T + ++ + L +V I Y S + + ++NG+ I++ ++ I Sbjct: 1 MESFRTVIKGWLGKVLLVLFLTPLALVGIEGYFSGGNKADVAKSVNGQDISNKELESAIK 60 Query: 62 LLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQ 108 K Q +++ A+ L+ +L Q+ EK GI+ + Sbjct: 61 NYKDQYLALVQGDESLLNLSAIQERAMDALVARSLLSQQAEKLGISLSDAQLEQMLAQQP 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + G ++ + N Q ++ + M + ++ Sbjct: 121 SFQQNGQFSQQLYENYLRSVGLTNQALISSLRQDHALKMISSSLMDNALVSKSDLQQLAN 180 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 L + + + ++ + + + Sbjct: 181 LQTEQRTLHL-ASIKLDDYKKGVTASTQEITDYYNKHKNEFKQVASVDVDYVVLSPALLE 239 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + + ++DL + ++K Q + + D+RD L + Sbjct: 240 QANLA---VTDADLQQAYAAFVEKQQQSVKREVK-----HILVTTDERDDAAAQKLINDV 291 Query: 289 SAQNTPTK-IEKHEAEYVKK 307 A+ + ++Y + Sbjct: 292 YAKIQSGMTFAQAASQYSED 311 >gi|90022282|ref|YP_528109.1| cell wall hydrolase/autolysin [Saccharophagus degradans 2-40] gi|89951882|gb|ABD81897.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Saccharophagus degradans 2-40] Length = 92 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 19/76 (25%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN- 255 + + ++ +K + G + F N++ K Sbjct: 12 KTKSEAEKLKQQLANGADFGTLAKKHSLCASAKQGGDLGEFNPGQMVKAFDNVVFKKPIL 71 Query: 256 NTTNPYVTQKGVEYIA 271 P TQ G I Sbjct: 72 TVHGPIKTQFGFHLIE 87 >gi|282851249|ref|ZP_06260614.1| PPIC-type PPIASE domain protein [Lactobacillus gasseri 224-1] gi|282557217|gb|EFB62814.1| PPIC-type PPIASE domain protein [Lactobacillus gasseri 224-1] Length = 303 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 34/298 (11%), Positives = 72/298 (24%), Gaps = 33/298 (11%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + I + + T G IT+ ++ + + + + Sbjct: 13 AATVLAFAGIALSATACSGGKAVVTYKGGKITESQYYNKMK-------ESQAGQSTLASM 65 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 IV + + K + + F S L++ G+ + FK L Sbjct: 66 IVSDALESQYGKEVTQKQVDKEYN------KYKKQYGSQFDSVLEQNGMTASTFKDNLKT 119 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + + K + + + + + Q Sbjct: 120 NLLTEAAL--KHIKKITPAQEKKAWKNYQPEVT--------VQHILVSKKSTAEDIIKQL 169 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 + + + + A K+ S L F+ K T Sbjct: 170 KDGGDFKKLAKKYSTDTATKNDAGKLPAFDSTD------STLDSSFKTAAFKLKTGEITT 223 Query: 260 -PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314 P TQ G I + G K + Q + E + + A + Sbjct: 224 TPVKTQYGYHVIKMIKHPAKGTLKEHKKQIDNQIYQSMSEDQSVMRSVIATVLKRADV 281 >gi|291231994|ref|XP_002735945.1| PREDICTED: protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1-like [Saccoglossus kowalevskii] Length = 152 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 7/97 (7%), Positives = 19/97 (19%), Gaps = 1/97 (1%) Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 R + + + ++ + + G Sbjct: 52 KHRESRRPASWKEDNITRTKEEALEILKEHRRRIVSGEISFAELASTESDCSSAKRGGDL 111 Query: 235 QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + F++ + P T G+ I Sbjct: 112 GPFGRGQMQKPFEDATFALKVGELSEPVFTDSGIHII 148 >gi|184157984|ref|YP_001846323.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii ACICU] gi|332874443|ref|ZP_08442346.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6014059] gi|183209578|gb|ACC56976.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase) [Acinetobacter baumannii ACICU] gi|323517928|gb|ADX92309.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase) [Acinetobacter baumannii TCDC-AB0715] gi|332737287|gb|EGJ68211.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6014059] Length = 621 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 46/396 (11%), Positives = 90/396 (22%), Gaps = 89/396 (22%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 T + ++ + L +V I Y + + + T+NG+ I+ D+ Sbjct: 1 MESFRTVIKGWLGKVLLVLFLTPLALVGIEGYFNRGNKADVAKTVNGQDISKKDLETLTQ 60 Query: 62 LLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQ 108 K Q ++ A+ L+ L Q+ EK GI+ + + Sbjct: 61 RYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSNAQIEQMLAQQP 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK------------- 155 + G ++ + + Q ++ + F Sbjct: 121 SLQENGQFSQKLYENYLRSIGMTSEGLIASLRQDHALKMLTSTFADYSLVSKVDLMQIAN 180 Query: 156 ---------------------YGNLEMEIPANKQKMKNITVRE----------------- 177 + E K +N + Sbjct: 181 LQTEQRTLHLASIKLDPYKAGLTASDQEATDYYNKHQNEFKQPASVDVDYVVLSPSLMAK 240 Query: 178 --YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG--- 232 L ++ Q KRI D + + G Sbjct: 241 PAPATDAELKQAYAKFVETQQKDAKRIVKHILITTDARDDAAAQKLAKDVYAKIQGGLSF 300 Query: 233 ---------KAQYLLESDLHPQFQNLLKK----------SQNNTTNPYVTQKGVEYIAIC 273 + L + + + P TQ G I Sbjct: 301 AQAAAQFSEDPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQISQPVKTQYGYHIIEAE 360 Query: 274 -DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + A K L A+ K+ ++ V L Sbjct: 361 TQANQIPSFEAEKPRLIAEVEKNKVASVYSDTVNSL 396 >gi|300361160|ref|ZP_07057337.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus gasseri JV-V03] gi|300353779|gb|EFJ69650.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus gasseri JV-V03] Length = 298 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 34/298 (11%), Positives = 72/298 (24%), Gaps = 33/298 (11%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + I + + T G IT+ ++ + + + + Sbjct: 8 AATVLAFAGIALSATACSGGKAVVTYKGGKITESQYYNKMK-------ESQAGQSTLASM 60 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 IV + + K + + F S L++ G+ + FK L Sbjct: 61 IVSDALESQYGKDVTQKQVDKEYN------KYKKQYGSQFDSVLEQNGMTASTFKDNLKT 114 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + + K + + + + + Q Sbjct: 115 NLLTEAAL--KHIKKITPAQEKKAWKNYQPEVT--------VQHILVSKKSTAEDIIKQL 164 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 + + + + A K+ S L F+ K T Sbjct: 165 KDGGDFKKLAKKYSTDTATKNDAGKLPAFDSTD------STLDSSFKTAAFKLKTGEITT 218 Query: 260 -PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314 P TQ G I + G K + Q + E + + A + Sbjct: 219 TPVKTQYGYHVIKMIKHPAKGTLKEHKKQIDNQIYQSMSEDQSVMRSVIATVLKRADV 276 >gi|42519550|ref|NP_965480.1| peptidylprolyl isomerase [Lactobacillus johnsonii NCC 533] gi|46396699|sp|P60750|PRSA1_LACJO RecName: Full=Foldase protein prsA 1; Flags: Precursor gi|41583839|gb|AAS09446.1| protease maturation protein precursor [Lactobacillus johnsonii NCC 533] gi|329667789|gb|AEB93737.1| protease maturation protein precursor [Lactobacillus johnsonii DPC 6026] Length = 298 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 75/301 (24%), Gaps = 39/301 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + I + + T G IT+ ++ + + + + Sbjct: 8 AATVLAFAGIALSATACSGGKAVVTYKGGKITESQYYDKMK-------ESQAGQSTLASM 60 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 IV + + K + + F S L++ G+ + FK L Sbjct: 61 IVSDALESQYGKDVTQKQVDKEYN------KYKKQYGSQFDSVLEQNGMTASTFKDNLKT 114 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + + K + + E ++ +L + Sbjct: 115 NLLTEAAL--KHIKKITPAQEKKAWK------NYQPEVTVQHIL-----------VSKKS 155 Query: 201 RIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESD---LHPQFQNLLKKSQNN 256 +D + +K+++ GK +D K Sbjct: 156 TAEDVIKQLQDGGDFKKLAKKYSTDTATKNDAGKLPAFDSTDSTLDSSFKTAAFKLKTGE 215 Query: 257 TTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH--EAEYVKKLRSNAI 313 T P TQ G I + G K + Q + E + + A Sbjct: 216 ITTTPVKTQYGYHVIKMIKHPAKGTFKEHKKQIDNQIYQSMSEDQNVMRSVIATVLKRAD 275 Query: 314 I 314 + Sbjct: 276 V 276 >gi|209520345|ref|ZP_03269110.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. H160] gi|209499219|gb|EDZ99309.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. H160] Length = 250 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 31/270 (11%), Positives = 68/270 (25%), Gaps = 26/270 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 I+ EV+ D+ + I LLKL + LI + ++ + + Sbjct: 4 IVRIDEEVV---DVDEFIRLLKLTGQ--------FESLIEQIVRDKLTVHAAKKQGLAVT 52 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 Q A + + H I + + + + + Sbjct: 53 ADEIQQRADQFRRVRGLHRAADMNHYLDALHVSLDEFEVFITDGLYQEKMLDEV-GNDAA 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + VL + K + + Sbjct: 112 IHDYFALNSPKFDAIEVSHIVLDNEG-----------KAKEMISYLHDDPDSFAEMAREH 160 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKG--VEYIAICDKRDLG 279 + S G +L L P + + + + P+ + E A+ K Sbjct: 161 SIADTRESGGVIGKVLRGSLKPDIEAKIFNAAVGDLLGPFPSVDRSCFEIFAVTAKYPAT 220 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + + + + E+V + R Sbjct: 221 LDADVATEIRRLLRESWLIARAQEHVIEAR 250 >gi|297181721|gb|ADI17902.1| parvulin-like peptidyl-prolyl isomerase [uncultured Desulfobacterales bacterium HF0200_07G10] Length = 299 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 1/103 (0%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQ 264 ++ + F++ + G ++ E +L Q + + N P +Q Sbjct: 21 KKQLDSGISFEEVVTNFSTCPSKENAGDLGWMPEGNLQSIMGQEVSESDIGNVIGPVHSQ 80 Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 G + I + E A LS ++ K+ Sbjct: 81 YGYHILKISEIEVEKIEGPFNAELSMESANQIFPDVHNILFKE 123 >gi|163748477|ref|ZP_02155731.1| parvulin-like peptidyl-prolyl isomerase [Shewanella benthica KT99] gi|294142261|ref|YP_003558239.1| peptidyl-prolyl cis-trans isomerase C [Shewanella violacea DSS12] gi|161332055|gb|EDQ02732.1| parvulin-like peptidyl-prolyl isomerase [Shewanella benthica KT99] gi|293328730|dbj|BAJ03461.1| peptidyl-prolyl cis-trans isomerase C [Shewanella violacea DSS12] Length = 92 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 4/77 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +++ +D + + K +K +S G + + PQF + Sbjct: 15 KEQAEDIIKQLKKGVKFDVLAKKHSSCPSGKKGGSLGEFKKGQMVPQFDKV--CFTGELI 72 Query: 259 NP--YVTQKGVEYIAIC 273 P T+ G I + Sbjct: 73 TPHLVKTKFGWHVIKVL 89 >gi|90021692|ref|YP_527519.1| hypothetical protein Sde_2047 [Saccharophagus degradans 2-40] gi|89951292|gb|ABD81307.1| hypothetical protein Sde_2047 [Saccharophagus degradans 2-40] Length = 289 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 29/318 (9%), Positives = 80/318 (25%), Gaps = 49/318 (15%) Query: 14 KLLTTYFVLIIFCIVPIV-------SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66 K +++ + ++ S A SS + T+NG IT ++ I Sbjct: 5 KSISSIALAVLLVASGCSDKEPEEVVTSSSADSSEVVATVNGAPITSHELELAIERTLGA 64 Query: 67 KIN----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 EL K + L+ Q + + Sbjct: 65 NAELFMTDELAKKLLDSLVASKAIAQ-----------------------------KSEAL 95 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + + + + + ++ + + N + + Sbjct: 96 LSADDLVLLDLKTKAYREELLVKAYLEQKVTPQ-PVTAEMVKKYYLDNPNKFGGGSIKQF 154 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + ++ + K + ++ + + DL Sbjct: 155 EYIQVQIQAKEDAASLLKVFNEITANKNWAQAVNTIKSTNGAWVVAHKSASL---NPKDL 211 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKG--VEYIAICDKRD--LGGEIALKAYLSAQNTPTKIE 298 ++++ K+ P G + + D++ L + + P +++ Sbjct: 212 QEPLKSIVAKTGAGAVAPVDV-NGLVYTLVKVLDEKPLALKPLAEVSGEIRKSLAPLQLK 270 Query: 299 KHEAEYVKKLRSNAIIHY 316 + E A++ Y Sbjct: 271 QAVREISDSALKEAVVVY 288 >gi|253735279|ref|ZP_04869444.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus subsp. aureus TCH130] gi|253726686|gb|EES95415.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus subsp. aureus TCH130] Length = 320 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 85/309 (27%), Gaps = 27/309 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K++ V + + + + + A S+ +I+ +A + ++ Sbjct: 1 MKMINKLIVPVTASALLLGACGASATDSK-----ENTLISSKAGDVTVADTMKKIGKDQI 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + E++ + L +K + ++ + + G + + + Sbjct: 56 ANASFTEMLNKIL----ADKYKNKVNDKKIDEQIEKMQKQYGGKDKFEKALQQQ-----G 106 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K K + EI + LI+ L Sbjct: 107 LTADKYKENLRTAAYHKELLSDKIKISDSEIK-----EDSKKASHILIKVKSKKSDKEGL 161 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-L 250 ++ QK + +E K +K + G+ Y+L+ F+ Sbjct: 162 DDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKALF 221 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE---KHEAEYVKK 307 K + + G I + K L + K++ K + K Sbjct: 222 KLKDGEVSEVVKSSFGYHVIKAD---KPTDFNSEKQSLKEKLVDQKVQKNPKLLTDAYKD 278 Query: 308 LRSNAIIHY 316 L + + Sbjct: 279 LLKEYDVDF 287 >gi|303257435|ref|ZP_07343448.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderiales bacterium 1_1_47] gi|302859792|gb|EFL82870.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderiales bacterium 1_1_47] Length = 259 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 26/238 (10%), Positives = 63/238 (26%), Gaps = 17/238 (7%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + + ++ D L E Q Sbjct: 23 VADQQELMKVLADRGVKDQKQQLEAARSILAQEKLIEEAAKKANIAQDPAVKALIAERQT 82 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + ++V+ + ++ K E +R +L ++ Sbjct: 83 EIYSAELVRKNAAAHPLTDADLKKTYEEVKKQYDPNEIKVRHIL-----------VKTEQ 131 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY--LLESDLHPQFQNLLKKSQNNT 257 KD +S ++ + G+ + + + + + ++ Sbjct: 132 EAKDIIKSLNAGGDFATIAKEKSLDQGTAAQGGEIPFTNIRRIAIPGFAETAMALNKGAL 191 Query: 258 TN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P+ + G I + DKR++ L Q ++ +Y+ L NA I Sbjct: 192 LPVPFHSALGYHVIQLQDKREVPL--PSFDALKPQIQNLAAQRQAQQYMADLMKNAKI 247 >gi|169845229|ref|XP_001829334.1| hypothetical protein CC1G_00513 [Coprinopsis cinerea okayama7#130] gi|116509399|gb|EAU92294.1| hypothetical protein CC1G_00513 [Coprinopsis cinerea okayama7#130] Length = 174 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 8/91 (8%), Positives = 22/91 (24%), Gaps = 1/91 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + ++ + K + + G + Sbjct: 80 RPSSWKEENITRTKEEAIEILKGYEAQIGGDPAKFAELAQAHSDCSSHSHGGDLGWFGRG 139 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + F++ ++ T GV I Sbjct: 140 QMQKPFEDATFALEVGKMSDVISTDSGVHLI 170 >gi|302842666|ref|XP_002952876.1| hypothetical protein VOLCADRAFT_82005 [Volvox carteri f. nagariensis] gi|300261916|gb|EFJ46126.1| hypothetical protein VOLCADRAFT_82005 [Volvox carteri f. nagariensis] Length = 253 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 9/91 (9%), Positives = 21/91 (23%), Gaps = 1/91 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + P + + + + + + G Sbjct: 159 RPSSWKEPVVTRTREEALAMIQRFHKMLVSGEADFATLASQESHCSSAKRGGDLGEFGRG 218 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 D+ F++ + P + GV I Sbjct: 219 DMQKPFEDATYALKVGELSGPVFSDSGVHLI 249 >gi|116630072|ref|YP_815244.1| peptidylprolyl isomerase [Lactobacillus gasseri ATCC 33323] gi|238854106|ref|ZP_04644453.1| foldase protein PrsA 1 [Lactobacillus gasseri 202-4] gi|311110302|ref|ZP_07711699.1| foldase protein PrsA 1 [Lactobacillus gasseri MV-22] gi|116095654|gb|ABJ60806.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus gasseri ATCC 33323] gi|238833182|gb|EEQ25472.1| foldase protein PrsA 1 [Lactobacillus gasseri 202-4] gi|311065456|gb|EFQ45796.1| foldase protein PrsA 1 [Lactobacillus gasseri MV-22] Length = 298 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 34/298 (11%), Positives = 72/298 (24%), Gaps = 33/298 (11%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + I + + T G IT+ ++ + + + + Sbjct: 8 AATVLAFAGIALSATACSGGKAVVTYKGGKITESQYYNKMK-------ESQAGQSTLASM 60 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 IV + + K + + F S L++ G+ + FK L Sbjct: 61 IVSDALESQYGKEVTQKQVDKEYN------KYKKQYGSQFDSVLEQNGMTASTFKDNLKT 114 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + + K + + + + + Q Sbjct: 115 NLLTEAAL--KHIKKITPAQEKKAWKNYQPEVT--------VQHILVSKKSTAEDIIKQL 164 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 + + + + A K+ S L F+ K T Sbjct: 165 KDGGDFKKLAKKYSTDTATKNDAGKLPAFDSTD------STLDSSFKTAAFKLKTGEITT 218 Query: 260 -PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314 P TQ G I + G K + Q + E + + A + Sbjct: 219 TPVKTQYGYHVIKMIKHPAKGTLKEHKKQIDNQIYQSMSEDQSVMRSVIATVLKRADV 276 >gi|148555285|ref|YP_001262867.1| hypothetical protein Swit_2370 [Sphingomonas wittichii RW1] gi|148500475|gb|ABQ68729.1| hypothetical protein Swit_2370 [Sphingomonas wittichii RW1] Length = 286 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 27/288 (9%), Positives = 64/288 (22%), Gaps = 44/288 (15%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKINGELEKIAVQELIVETLKKQE 89 S +I +NGE I+ +++ + + +L K +Q LI L Q+ Sbjct: 19 SGCHKEPKGQILAIVNGEEISLQELNAELQGTRIPDSVDRDKLRKQVLQRLIDRKLIVQK 78 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 + G+ V +++ ++ Sbjct: 79 AREQGLDKTPEYVTQQ-------------------------------RRLEENLLVTMLG 107 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + + + R E+ Sbjct: 108 QKIASTVPMPDDRDITQYIADNPTQFASRQRLLLDQIQFAAPKDPKQLLTLRDAHTLEAL 167 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 + + L P ++ + + Sbjct: 168 ATGIQKLGLGMSRGK----------GVIDTGRLDPALVKVINQLPPGEPFVLPSNGQYVA 217 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTK-IEKHEAEYVKKLRSNAIIHY 316 I + + +A+ K + V + R++A I Y Sbjct: 218 SVIVGRDATPTPTPIARQAAAEMVRRKELVAESKAQVARARTSAEIQY 265 >gi|117619758|ref|YP_856089.1| peptidyl-prolyl cis-trans isomerase C [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561165|gb|ABK38113.1| peptidyl-prolyl cis-trans isomerase C [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 92 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 25/78 (32%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 +K + +E + ++F++ G + D+ F + + K Sbjct: 12 KTEKECLEIKEKIAKGADFGQMAKRFSTCASSKRFGDLGEFSKGDMVKAFDDAVFKGELL 71 Query: 256 NTTNPYVTQKGVEYIAIC 273 P T+ G I + Sbjct: 72 TVLGPVRTKFGFHLIKVL 89 >gi|227513558|ref|ZP_03943607.1| peptidylprolyl isomerase [Lactobacillus buchneri ATCC 11577] gi|227083431|gb|EEI18743.1| peptidylprolyl isomerase [Lactobacillus buchneri ATCC 11577] Length = 293 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 35/280 (12%), Positives = 80/280 (28%), Gaps = 37/280 (13%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 +I ++S+ A S+ T NG IT+ K +Q++I+ Sbjct: 5 LIVLAGVLMSFTLAACGSKSVATTNGGKITES-------AYYSSLKGTSSGKQVLQQMIL 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + +++ K + VN F ++ + G S + L Sbjct: 58 NKVLEKQYGKK---VKESAVNKDFNKYKKQYGSSFNAVL-------QQNGMTASQLKDSI 107 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 +++ + ++ A + + +L S ++ Sbjct: 108 RSNLLLQQAVRDNTKFTDAQLKA----QFKSYQPKVTVNQILVSKKSTAETVIKQLKA-- 161 Query: 203 KDAEESRLRLPKDCNKLEKFASK-IHDVSIGKA---QYLLESDLHPQFQNLLKKSQNNTT 258 + +K+++ G+ S + K + T Sbjct: 162 ---------GKSFSSLAKKYSTDTATKNKGGRISAFDNTNTSLDSNFKKAAFKLKNGDYT 212 Query: 259 N-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 P TQ G + I + + G ++ L Q ++ Sbjct: 213 KTPVKTQYGYQVIQMVNHPAKGTYKDHESELKTQLVDKRL 252 >gi|163815686|ref|ZP_02207058.1| hypothetical protein COPEUT_01866 [Coprococcus eutactus ATCC 27759] gi|158448991|gb|EDP25986.1| hypothetical protein COPEUT_01866 [Coprococcus eutactus ATCC 27759] Length = 335 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 26/310 (8%), Positives = 79/310 (25%), Gaps = 22/310 (7%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 +I +V + + NG+ I ++ +K + + + + Q + Sbjct: 5 CVIGMMLVGCGGNGNADTEKEVVFRYNGQDIYIDEVYVYARTVKERYESKYGKDVWGQSI 64 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + + E S + + ++ S Q F + L Sbjct: 65 VTDDGLEMNAEDSARRETISRIVKTKTLITKSDEYGISLTDSEQRMQEQDAEKFYELLTD 124 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF------SIPDNKLQN 194 + I ++ + + + + + E + Sbjct: 125 EQIAEVGLEENTVKQVLEESALADKIYTYVMKQSSTEISDEQARMSTFYDMFFECYSEDD 184 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ-----------YLLESDLH 243 G + + + + + + S +++I + ++ Sbjct: 185 FGNITLYPQSKIDVQKKKADEAYAAIVEESDNSNLNISFLGSAKSLKYAGTHTMSRDEIV 244 Query: 244 -----PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 L S + + T+ G + D K L+ + Sbjct: 245 STYGQDTLDILYSLSDGDISPVVQTEYGYHIFQMISLTDETATAENKEKLTEAADGEYYD 304 Query: 299 KHEAEYVKKL 308 ++++ +L Sbjct: 305 NLMSDWIDEL 314 >gi|227530453|ref|ZP_03960502.1| peptidylprolyl isomerase [Lactobacillus vaginalis ATCC 49540] gi|227349631|gb|EEJ39922.1| peptidylprolyl isomerase [Lactobacillus vaginalis ATCC 49540] Length = 310 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 32/279 (11%), Positives = 66/279 (23%), Gaps = 25/279 (8%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 LI + A S+ T +G IT + + K +Q++I Sbjct: 6 LIAMIACATLVLPLAACGSKAVATTSGGKITQEEYYNEMK-------TTTNGKQVLQQMI 58 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 ++ + ++E K N + S ++ L Q Sbjct: 59 LDKVLEKEYGKQVSDKQVN----------AQYNTYKNQYGSQFSAVLQQQGLTEKKLKQQ 108 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 ++ +I + +L D+ + Sbjct: 109 IRSNLCLEAAVRSYTHITNAQINKQW----KKYEPKVQTAEILVGSKDDAQSIIDQLNNS 164 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT-NP 260 + + + ++K + S + K T P Sbjct: 165 DHPYKTFKKLVKSKSTDA---STKNAGGKVAAFDNTSTSVDSAYKKAAFKLKTGEYTTEP 221 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 T G I + + G + L Q K+ Sbjct: 222 VKTDDGYVVIYMIEHPAKGKKSQHINDLKTQIVQEKMND 260 >gi|308066898|ref|YP_003868503.1| Parvulin-like peptidyl-prolyl isomerase [Paenibacillus polymyxa E681] gi|305856177|gb|ADM67965.1| Parvulin-like peptidyl-prolyl isomerase [Paenibacillus polymyxa E681] Length = 310 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 31/313 (9%), Positives = 85/313 (27%), Gaps = 35/313 (11%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSR-----IRTTINGEVITDGDISKRIALLKLQKIN 69 ++ T V + ++ + S+ + E I++ + Sbjct: 13 IILTVSVAALGGLIMLRGLSKPGDVSKDDGDHTVAEMGQEGISEEQWVAELK-------- 64 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + +++ + E ++ GI + Q ++ + ++ D+ Sbjct: 65 KRYGTDTLLQMLNRKAVQAETKRLGIKITQEDLQQVLEQDSK----GYDSDHAYFDEMQR 120 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 L ++ + ++ E EI ++ I+ + + Sbjct: 121 QFGLDPVDLRNEAEYRIGLEKIATQGIQVQEAEIDEYWEQHPEEFAVGKQIQLAALYVDN 180 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES---DLHPQF 246 + + + ++ + ++ + + G+ ++ E Sbjct: 181 AEEAEALLDRVKQGESFDVLIQEYSGKPFGKDSS--------GQLGWVDEYDPLQPEAIM 232 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE---AE 303 + + S + P G I + D R K + Q + E Sbjct: 233 KAARELSSGDVAGPISVNDGYAVIYVQDVR--LKNSPDKQQIRQQIRRSLALAQAAPLEE 290 Query: 304 YVKKLRSN--AII 314 K LR A I Sbjct: 291 VEKSLRDKYGARI 303 >gi|262341372|ref|YP_003284227.1| peptidylprolyl isomerase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272709|gb|ACY40617.1| peptidylprolyl isomerase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 410 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 32/284 (11%), Positives = 88/284 (30%), Gaps = 15/284 (5%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94 S+ I + E+I D +I + +L+ + +++L++ KK + Sbjct: 25 SFEKLEGIYAIVGNEIILDSEI----KTKNSKNCLDDLDDLLIEKLMLYHAKKDVSIQIS 80 Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 F + ++ E K+ + ++ + Sbjct: 81 NQELELKTQAFLSEMSKKYANQEEFLIQQFKKKEWIPKLTETIKNH--LYIEKFYQKITD 138 Query: 155 KYGNLEMEIPANKQKMKNITV---REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 E+ K K+ ++ I ++ +++ + K +E Sbjct: 139 NVEISPKEVKYFFTKNKSKIPFLPKKMCISYLVCIPKLSQMNRMKIIDFLKKIKKEIHSD 198 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + + + G Q + + L +F++++ S+ + P+ T G I Sbjct: 199 IDFSIQAILFSEDNYSASNGGLIQGIKINRLSKEFKHVVLSLSEKEISEPFETDSGFHII 258 Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIE-KHEAEYVKKLRSNAI 313 + + + ++ + TK E + +V ++ Sbjct: 259 KLEKNK----DEVDLRHILIKPKYTKHELRKTKSFVDSIQKRIF 298 >gi|307726909|ref|YP_003910122.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1003] gi|307587434|gb|ADN60831.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1003] Length = 250 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 32/270 (11%), Positives = 73/270 (27%), Gaps = 26/270 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 I+ EV+ D+++ I LLKL + LI + ++ + + Sbjct: 4 IVRIDDEVV---DVAEFIRLLKLTGQ--------FESLIEQIVRDKLTVHAAKKQGIVVT 52 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + A + Q + + I + + + + E Sbjct: 53 ADEIQERADQFRRVRGLHRATDMNQYLDVLNVSLDEFEAFITDGLYQEKMLDQV-GNEAA 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + VL S K + R + + Sbjct: 112 VRDYFALNSPKFDAIEVSHIVLDSEG-----------KAKEMISYLRDDPESFADMAREH 160 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKG--VEYIAICDKRDLG 279 + + G +L L P + + + + P+ + E A+ K Sbjct: 161 SIADTREAGGVIGKVLRGSLKPDIEAKIFNAAVGDLLGPFPSADRSCFEIFAVTAKYPAT 220 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + A + + + E+V + R Sbjct: 221 LDADVAAEVRRLLRESWLIARAQEHVIEAR 250 >gi|160896561|ref|YP_001562143.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Delftia acidovorans SPH-1] gi|160362145|gb|ABX33758.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Delftia acidovorans SPH-1] Length = 300 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/207 (8%), Positives = 51/207 (24%), Gaps = 7/207 (3%) Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 A L + +++ L + Sbjct: 80 RQAAQREGLLGADDAAGDDGVISERASQAIEQLLEQSLHLPEPGEDACRRHFDANPARFA 139 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR---LRLPKDCNKLEKFASKIHDVSI 231 E + + + + Q+ E R + ++++ Sbjct: 140 QGERVRLRHVLFAVTPGVDVRALTQRAEALLIELRCADDAGLRFAEAARQWSNCPSGQHG 199 Query: 232 GKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAY 287 G+ +L SD P+F + + ++ G+ + +C + + Sbjct: 200 GELGWLGRSDCAPEFARDVFASQEIGVLPRLVHSRFGLHVVEVCAREAGVLPDWQQARPA 259 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAII 314 ++ +Y++ L + + Sbjct: 260 VAQALHQQTWVSALHQYLQLLAGQSEV 286 >gi|194766868|ref|XP_001965546.1| GF22548 [Drosophila ananassae] gi|190619537|gb|EDV35061.1| GF22548 [Drosophila ananassae] Length = 173 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 9/142 (6%), Positives = 27/142 (19%), Gaps = 1/142 (0%) Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + + + G + P Q + + + R + + Sbjct: 28 HTKESQWDQPTEPAKKAGASSGGGASGGGSGGDAPDEVQCLHLLVKHKGSRRPSSWREEN 87 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQN 248 + + ++ G + P + Sbjct: 88 ITRTKEEAQLLLEVYRNKIVQGEATFDELARSYSDCSSAKRGGDLGTFGRGQMQPPFEKA 147 Query: 249 LLKKSQNNTTNPYVTQKGVEYI 270 + + T G+ I Sbjct: 148 AFGLNVGQLSGIVDTDSGLHII 169 >gi|38258251|sp|Q9LEK8|PIN1_DIGLA RecName: Full=Peptidyl-prolyl cis-trans isomerase Pin1; Short=PPIase Pin1; AltName: Full=DlPar13; AltName: Full=Rotamase Pin1 gi|8670992|emb|CAB94994.1| peptidyl-prolyl cis-trans isomerase [Digitalis lanata] Length = 118 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 11/115 (9%), Positives = 26/115 (22%), Gaps = 1/115 (0%) Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 ++ A+ +K+ R + V + +E + Sbjct: 1 MSSEKVRASHILIKHQGSRRKSSWKDPDGSLISATTRDDAVSQLQSLRQELLSDPASFSD 60 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + + G + F+ ++ T GV I Sbjct: 61 LASRHSHCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIK 115 >gi|325479322|gb|EGC82418.1| conserved domain protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 303 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 32/327 (9%), Positives = 84/327 (25%), Gaps = 43/327 (13%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--- 65 + + + I + + K + + ++G+ I+ D SK + + Sbjct: 1 MKNLRAITNKLIFYAILAFLVLTGCKRSSNKTDAVAVVDGKEISSKDYSKELKFYQSYYS 60 Query: 66 ---------------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 + L K + +I + + ++EK+ I D N V Sbjct: 61 KLYGDNYLSEKNKNGLTNDEILRKELLDSMIKDKIMLSDLEKNKIKLDDNNVIKLTDNLK 120 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 ++ ++ G+ + + + + K+ Sbjct: 121 KSMNGEDSLGANVDALNANGNLFNEIIFNDAIRKSHY-EMFVSKQSVRDSDVLDFYKKNK 179 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 K + +Y + ++ K+ + +R N ++ Sbjct: 180 KYQKMYKYNLIVFDDENEAKDIKKNITNAKKFNEYLNKSVRNYDIVNSEFAYSDD----- 234 Query: 231 IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 + +N ++ + I + L Sbjct: 235 -------------EVLKASKLTEKNRPSDVFKYNDKYIIAMIN------SYNENENELLM 275 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHYY 317 +K +Y+ KL ++ I Y Sbjct: 276 NAKSVYQKKAYEDYLNKLIKSSKIKVY 302 >gi|47211406|emb|CAF94222.1| unnamed protein product [Tetraodon nigroviridis] Length = 129 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 23/83 (27%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 + +A E + +++ G ++ + FQ Sbjct: 48 KSMEAMEKLKAGVRFSEVATQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPISSMDK 106 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 107 PVYTDPPVKTKFGYHIIMVEGKK 129 >gi|85858466|ref|YP_460668.1| peptidyl-prolyl cis-trans isomerase [Syntrophus aciditrophicus SB] gi|85721557|gb|ABC76500.1| peptidyl-prolyl cis-trans isomerase [Syntrophus aciditrophicus SB] Length = 533 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 21/195 (10%), Positives = 59/195 (30%), Gaps = 17/195 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + +++ ++++F ++ S ++G+ I ++ K Sbjct: 1 MLELMRKHAKNWLMKFLLGMIIVVFIF--YFGTRTGKEKSETVAIVDGKEIALAEVQKEY 58 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + L EL++ A+ LI + + Q+ + +T + V F + Sbjct: 59 SNLAEFYRRQYGGSLTDEMLKGLELKQNALDSLIAQAIIMQKAGELNLTATDDEVRNFIM 118 Query: 108 QH--ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + + G E + + + + + ++ + E+ Sbjct: 119 AYPAFQRDGTFNEKIYQQMLRLNRMTPEEFEASQQRMLSAAKLEQLIQEAVKVSDQEVFD 178 Query: 166 NKQKMKNITVREYLI 180 YL+ Sbjct: 179 FFSFQNEQIKISYLM 193 >gi|89885882|ref|YP_516080.1| hypothetical protein Rfer_4396 [Rhodoferax ferrireducens T118] gi|89347880|gb|ABD72082.1| hypothetical protein Rfer_4396 [Rhodoferax ferrireducens T118] Length = 274 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 21/219 (9%), Positives = 66/219 (30%), Gaps = 3/219 (1%) Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 + V + A S+++K + ++ ++ +L Sbjct: 56 VNGEPVYEIELASMLQNMPHAVAVDSYINKVLSAQAAKTESAGLEVAARRLMAEREVLSN 115 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + + + + ++ R + S+ + F+ +DA + L+L + Sbjct: 116 LYFSRIGEREVKGVSDAEIDQFYQRNLSDSMFARIGASY-FLSATDEDATQFALKLREGD 174 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 + + + + + + + + T+ G + + + Sbjct: 175 KEAAAKLKPFLNPAGKAIAFAPADFPYDMGKLIQTMKVGEVSGSLATRNGFFVVRVDEV- 233 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + G+ + Q + + E +++LR A I Sbjct: 234 -VPGKRPAIKEIKEQLRSALVNQRVGEKLQQLRKGAKIE 271 >gi|256599527|pdb|2ZQT|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl Cis-Trans Isomerase Length = 163 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 8/103 (7%), Positives = 24/103 (23%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + ++ ++ + + +F+ Sbjct: 57 CSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSA 116 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + G F++ + P T G+ I Sbjct: 117 KARGDLGAFSRGQAQKPFEDASFALRTGEMSGPVFTDSGIHII 159 >gi|171463604|ref|YP_001797717.1| hypothetical protein Pnec_0905 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193142|gb|ACB44103.1| conserved hypothetical protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 482 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 23/256 (8%), Positives = 70/256 (27%), Gaps = 27/256 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M V ++ + ++ F + SY S+ +NG+ IT ++ Sbjct: 1 MFDTVR-KHQRILQFVLMLLIVPSFAFFGVSSYSSFLDKETDLVKVNGKSITAQEVDMAA 59 Query: 61 ALLKLQ-------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----- 108 + + + + + EL+ + + + + + Sbjct: 60 KRQAERVGGNVQIAQSLQFRQAILNELLQQRILGFAVSDLRLQVGKEALVKSLQNIPQIR 119 Query: 109 --HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------NDFML 154 + ++ F L G+ + F A +V ++ + Sbjct: 120 ALYKQDGSFDDARFKQLLASNGLNEGQFYAGQAFDLKISQLVNSVARTEIGSPKLSEIVS 179 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 +E ++ K+ + + L + + + + + + Sbjct: 180 TLYEMERQVQIMPFDAKDYLSKVNPSQEELQAFYAANSKLFESPEYVDVEYIVLKADSKE 239 Query: 215 DCNKLEKFASKIHDVS 230 D + A + ++ Sbjct: 240 DAKVFSEKADQFTKIT 255 >gi|326431789|gb|EGD77359.1| parvulin-type peptidyl-prolyl cis-trans isomerase [Salpingoeca sp. ATCC 50818] Length = 149 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 35/111 (31%), Gaps = 11/111 (9%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR--LPKDCNKLEKFASKIHDVSIGK 233 +R +L +Q +++ K A+ + + +F+ S G Sbjct: 40 TNVEVRHILCEKHSKAMQALEQLRQAYKPADGGKPQTGYSTWIKVASEFSED-KAKSGGN 98 Query: 234 AQYLLESDLHPQFQNLLK-----KSQNNTT---NPYVTQKGVEYIAICDKR 276 ++ + FQ+ K P T+ G I + +K+ Sbjct: 99 LGWMARGSMVGPFQDAAFALEVSKPNGPVIFTDPPVKTKFGYHIIMVTNKK 149 >gi|193084249|gb|ACF09911.1| peptidyl-prolyl cis-trans isomerase ppiD [uncultured marine group III euryarchaeote KM3-28-E8] Length = 631 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/249 (6%), Positives = 57/249 (22%), Gaps = 15/249 (6%) Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + + L E + + ++++ +++ + + E Sbjct: 153 SRLRQELSRAQVLGSLTSEVPVSEVLTNRLYSWNAEKRVAAYIKIQHDAIANIEKPDDAA 212 Query: 125 DKQGIGDNH--FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 ++ N F + + + D + +I + + Sbjct: 213 LQEYYKGNESLFTAPEYRSATYVHLTGKDVESDIDVSDADIQKLYDQNIDAFKVPERRTV 272 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + K L + ++ + + L Sbjct: 273 QQMIF------STEEEAKTGAAHLAEGKTFAAVAKDLLRQDEDATNI----LGDVTKIHL 322 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEK 299 + + S T P G + + + + ++ + AQ + + Sbjct: 323 PDTLAEAVFNLSDGQVTPPLEGPFGWYVMRVTAIKAPKTQQLLEVRIDIRAQLVQERSGE 382 Query: 300 HEAEYVKKL 308 + L Sbjct: 383 ALYKLSNDL 391 >gi|90961451|ref|YP_535367.1| peptidylprolyl isomerase [Lactobacillus salivarius UCC118] gi|227890540|ref|ZP_04008345.1| peptidylprolyl isomerase [Lactobacillus salivarius ATCC 11741] gi|122449241|sp|Q1WUQ1|PRSA_LACS1 RecName: Full=Foldase protein prsA; Flags: Precursor gi|90820645|gb|ABD99284.1| Peptidyl-prolyl cis-trans isomerase [Lactobacillus salivarius UCC118] gi|227867478|gb|EEJ74899.1| peptidylprolyl isomerase [Lactobacillus salivarius ATCC 11741] Length = 296 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 36/281 (12%), Positives = 81/281 (28%), Gaps = 34/281 (12%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 + I IV A S+ T +G IT+ + + K +Q++I+ Sbjct: 6 LVAISGIVLTFGLAACSKTVATTSGGKITESEYYSSMK-------KTSSGKQVLQQMILN 58 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + ++E N + + S D ++ K + Sbjct: 59 KVLEKEYGSKVSDKKVN----------EQYNTYKKQYGSSFDSVLAQNDMTKSSFKQEIR 108 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++K ++ A ++ + + L ++ + I Sbjct: 109 SNLLLKEAVKDNTKITNKQLKAQWKEYEPK------------VTVAHILVSKKSTAEDII 156 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYL--LESDLHPQFQNLLKKSQNN--TT 258 + + +K+++ + GK ++ L F+ + TT Sbjct: 157 NKLKEDGSYANFKKLAKKYSTDSSTKNDGGKLAAFDNTDTSLDSTFKKAAFGLKQGSFTT 216 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 P T+ G I G + L +Q +K+ Sbjct: 217 EPVKTEYGYHVIYSIKNPGKGKMSDHTSELKSQIIDSKMSD 257 >gi|13786637|pdb|1EQ3|A Chain A, Nmr Structure Of Human Parvulin Hpar14 Length = 96 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E + +++ G ++ + FQ Sbjct: 15 KIMEAMEKLKSGMRFNEVAAQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDK 73 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 74 PVFTDPPVKTKFGYHIIMVEGRK 96 >gi|313637843|gb|EFS03178.1| foldase protein PrsA 1 [Listeria seeligeri FSL S4-171] Length = 160 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 15/122 (12%), Positives = 37/122 (30%), Gaps = 4/122 (3%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK--KSQN 255 + K+ + K + +++++ + G ++ F+ + + Sbjct: 15 EATAKEVQTKLKNGEKFTDLAKEYSTDTATSTNGGLLDPFGTGEMDEAFEKAAYALEKTD 74 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKKLRSNAII 314 + + T G I + K D KA + ++ +KK A I Sbjct: 75 DVSGIVKTSYGYHLIQLVKKIDKTTYAKDKAKVKEAYIQSQLTSENMTAALKKELKAANI 134 Query: 315 HY 316 Sbjct: 135 DI 136 >gi|295132519|ref|YP_003583195.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zunongwangia profunda SM-A87] gi|294980534|gb|ADF50999.1| PpiC-type secreted peptidyl-prolyl cis-trans isomerase [Zunongwangia profunda SM-A87] Length = 702 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 26/112 (23%), Gaps = 10/112 (8%) Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQNLLKK 252 Q A + K +F+ + G Y + P F + + Sbjct: 368 ESAAKQLADSLAGVIKADKSKMAALATEFSDDPSAAQNSGDLGYFRPGMMVPTFDDFVLN 427 Query: 253 SQNNTTNPYVTQKGVEYIAIC---DKRDLGGEIALKAYL------SAQNTPT 295 + T T G I I D+ + + + Sbjct: 428 NNEGTVGVVETDFGYHVIYIEEQTDREKAVKIATVAREIDATEGTRNKLFNE 479 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 52/154 (33%), Gaps = 6/154 (3%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 +K+ S F+ +L L F + ++ ++ T+NGE I+ + ++++ Sbjct: 4 LNKIRQR-SVFL-ILIIALALFSFVLADVIRSGGFSGKDNSIATVNGEEISREEFARQVE 61 Query: 62 LLKLQKINGELEKIAVQELIV----ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 + AV + + + ++++EK GI + V Sbjct: 62 AYQQNMRGNISTTQAVNRVWDQELNQIIVEEQVEKLGIRAEQAQVRQMMRAQMSQNPQFT 121 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 + F + + + + Q + + Sbjct: 122 NEAGMFDENRVKEYVASLKQTSPQMYQQWLSYEE 155 Score = 42.7 bits (98), Expect = 0.079, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 36/120 (30%), Gaps = 1/120 (0%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 + I + S + + K + V++ + Sbjct: 577 KQKKAEIIKEKISGTTVDQVAENQNKIVQTANAVNLSSPTLAGAGSEPEVVGAVYALGVG 636 Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T+ P V KGV + + K + + K + + + + + + L++ A I Sbjct: 637 ETSKPIVGDKGVYVVELVSKSEAPELDSYKPFAQQETSSRRQMANSRA-FEALKAKAEIE 695 >gi|331000016|ref|ZP_08323712.1| PPIC-type PPIASE domain protein [Parasutterella excrementihominis YIT 11859] gi|329573164|gb|EGG54781.1| PPIC-type PPIASE domain protein [Parasutterella excrementihominis YIT 11859] Length = 268 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 26/238 (10%), Positives = 63/238 (26%), Gaps = 17/238 (7%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + + ++ D L E Q Sbjct: 32 VADQQELMKVLADRGVKDQKQQLEAARSILAQEKLIEEAAKKANIAQDPAVKALIAERQT 91 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + ++V+ + ++ K E +R +L ++ Sbjct: 92 EIYSAELVRKNAAAHPLTDADLKKTYEEVKKQYDPNEIKVRHIL-----------VKTEQ 140 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQY--LLESDLHPQFQNLLKKSQNNT 257 KD +S ++ + G+ + + + + + ++ Sbjct: 141 EAKDIIKSLNAGGDFATIAKEKSLDQGTAAQGGEIPFTNIRRIAIPGFAETAMALNKGAL 200 Query: 258 TN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P+ + G I + DKR++ L Q ++ +Y+ L NA I Sbjct: 201 LPVPFHSALGYHVIQLQDKREVPL--PSFDALKPQIQNLAAQRQAQQYMADLMKNAKI 256 >gi|38258219|sp|Q94G00|PIN1_MALDO RecName: Full=Peptidyl-prolyl cis-trans isomerase Pin1; Short=PPIase Pin1; AltName: Full=MdPin1; AltName: Full=Rotamase Pin1 gi|15077233|gb|AAK83088.1|AF290200_1 Pin1-type peptidyl-prolyl cis/trans isomerase [Malus x domestica] Length = 121 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 8/76 (10%), Positives = 20/76 (26%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 V + ++ K + +++ G + + F+ Sbjct: 43 AVSQLKALRDDILSGKAKFDDLAARYSDCSSAKRGGDLGPFGRNQMQKPFEEATFALKVG 102 Query: 256 NTTNPYVTQKGVEYIA 271 ++ T GV I Sbjct: 103 EMSDIVDTDSGVHIIK 118 >gi|300775367|ref|ZP_07085229.1| possible peptidyl-prolyl cis-trans isomerase [Chryseobacterium gleum ATCC 35910] gi|300506107|gb|EFK37243.1| possible peptidyl-prolyl cis-trans isomerase [Chryseobacterium gleum ATCC 35910] Length = 717 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 36/280 (12%), Positives = 75/280 (26%), Gaps = 20/280 (7%) Query: 51 ITDGDISKRIALLKLQKINGELEKI------AVQELIVETLKKQEIEKSGITFDSNTVNY 104 +T D++ I + I + + +EI K + Sbjct: 215 VTTQDLADYIKKHPVMFKAEPSRNIGIVFFPSKPSAADDAAALKEITKLYSGGTDASGGT 274 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 Q+ +N + S + I V F E ++ Sbjct: 275 ENFQNTKNDSMFVTANSDAPFNPQYLNPAQLPPTIKDQITSAAVGQTFGP---YKEQDVY 331 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQN-----QGFVQKRIKDAEESRLRLPKDCNKL 219 + + L R +L + + + +K P + Sbjct: 332 VVSKLVGKRPSDSTLSRHILIAFKGSPAGEGVTRTKEQAKKLADSIGAIVKATPAKFTEF 391 Query: 220 EKFASKI-HDVSIGKAQYLLESD-LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 K +S G + P+F L + T TQ G I I DK+ Sbjct: 392 LKLSSDPNSAAQGGSLGWTTPETPFVPEFLAYLANNPKGATGVVETQFGYHIINIEDKKS 451 Query: 278 LGGEIALKAYLSAQ----NTPTKIEKHEAEYVKKLRSNAI 313 + + A T + +K +++++++ + Sbjct: 452 GSMGYKVANLVKAIKPSDATEAETDKKSRKFIQQVQGKSF 491 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 55/151 (36%), Gaps = 7/151 (4%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ- 66 ++ + L+ F + P K + + + +NGE IT + + ++ +L+ Q Sbjct: 8 RSKPWLLMGVIALALLAFLVNPDSIDKVFGKNPDVLGKVNGEKITREEFNDQLFVLQQQA 67 Query: 67 ----KINGELEKIAVQELIVETLKKQEIEK--SGITFDSNTVNYFFVQHARNTGLSAEDF 120 + LE+ A Q L+ L KQ+ EK +T D + Q ++ Sbjct: 68 EQQGRPKNGLEEQAWQLLVQSKLIKQQFEKLGFEMTDDYFWNQIQYDQMFAQNQQFFDEK 127 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 +F ++ + Q Q + Sbjct: 128 GNFKTQELKKEIETLQNTNPQGYAQWLKTRK 158 >gi|171059049|ref|YP_001791398.1| peptidyl-prolyl cis-trans isomerase [Leptothrix cholodnii SP-6] gi|170776494|gb|ACB34633.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Leptothrix cholodnii SP-6] Length = 299 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 32/293 (10%), Positives = 75/293 (25%), Gaps = 42/293 (14%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE--KIAVQELIVET 84 ++ ++++ +N E I+ I+ + K K ++ LI + Sbjct: 27 MLVACGGGDKKGATQVAAKVNKEEISVHQINFVLQRQPGLKPEQAPAATKAVLEGLIDQE 86 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 L QE ++ I D V + + + Sbjct: 87 LAIQEAQEQKIDRDPKVVMAI------------------------------EAAKREILA 116 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 + EI A + + + + FSI + Sbjct: 117 RAYADKLADTVSKPTDDEIAAYYKDKPALFAQRRVYTLHEFSIEAAGDAAKNVTALVQAA 176 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQ 264 L ++ + + +L + + + + Sbjct: 177 KSSDELSKQLTAASVKFASRVVTQ---------PAENLPLAMIDRIGSLAEGQSLAIPSA 227 Query: 265 KGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 G+ + + + K + + K A+ +K+LR +A I Y Sbjct: 228 NGISAVFVAAAKPQPVTAEQAKPAIEQFLLNDRKRKLVADEMKRLRGSAKISY 280 >gi|297568379|ref|YP_003689723.1| hypothetical protein DaAHT2_0398 [Desulfurivibrio alkaliphilus AHT2] gi|296924294|gb|ADH85104.1| hypothetical protein DaAHT2_0398 [Desulfurivibrio alkaliphilus AHT2] Length = 559 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 30/270 (11%), Positives = 84/270 (31%), Gaps = 17/270 (6%) Query: 57 SKRIALLKLQKINGELEKIAV-----QELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 +R+A L + + + Q L + D+ A Sbjct: 281 EQRLAELDINAPDDAFGDEVLVATSRQNLTERDFIAMVRRDMTMRPDAAHA-------AF 333 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 + +AE +D + LA + K ++ + + Sbjct: 334 DEEKAAEIKDRVVDGFIAQSLTNWESLARGYEKREPFKGEYDFHVNHRLSVTLERRLFAD 393 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 + V + ++R + + I + E ++ + ++F+ + + Sbjct: 394 QVKVDDDMVRRHYEENLAHFSRPAHVRLNIITNDEGPVNQVWAEVVAGKEFSRAVQEHFG 453 Query: 232 GKAQ--YLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKA 286 + + + L P+ + +++K + T+ P+ Q + + D+ + + Sbjct: 454 RRIPGQEVPINHLDPRVRGVVEKLAPGETSAPFDAQGSRVVVHLIDRVPENPLPFERVAG 513 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + K + Y+ +LR+ + I Sbjct: 514 NIRDRLVREKTAQLRQSYLDQLRARSRIEI 543 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 7/84 (8%), Positives = 24/84 (28%), Gaps = 3/84 (3%) Query: 236 YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQN 292 + + P + + + +P G+ + + + D ++ L Sbjct: 196 WHRPQGIAPGWAEIFNNMEKGEVADPEKHHGGLMLFHLKEVKGGDAEDFQRMRESLHRDV 255 Query: 293 TPTKIEKHEAEYVKKLRSNAIIHY 316 + + + +LR + Sbjct: 256 WKEQEAALTRQLLAELRRKYQVEI 279 >gi|298207424|ref|YP_003715603.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Croceibacter atlanticus HTCC2559] gi|83850060|gb|EAP87928.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Croceibacter atlanticus HTCC2559] Length = 700 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 31/104 (29%), Gaps = 1/104 (0%) Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 + Q A R K + ++ K+ G + + P F + + + Sbjct: 366 EEEAKQLADSLASVLRRDRNKFTDFATTYSADKVSGAKGGDLGFFTPGRMVPVFNDYVFQ 425 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 + +Q G I I ++ D + L + K Sbjct: 426 NNEGDLGVVKSQFGFHIIDIQEQTDKEKAVKLATIVREIEASEK 469 Score = 43.5 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 27/240 (11%), Positives = 68/240 (28%), Gaps = 7/240 (2%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 +K+ I ++ + V S + T+ GE I + +K++ Sbjct: 4 LNKIRERSIFLIIIIALALFSFVLADVIRNGGFSSSKGENTVATVGGENIDRTEFAKQVD 63 Query: 62 LLKLQKINGELEKIAVQEL----IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 L Q AV + + E + Q+ EK GI + + Sbjct: 64 LYSKQLGPNASTMQAVNRVYDAKVREVVLAQQFEKLGIEVSPEQLKATMALQLEGNPTFS 123 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 ++ +F +++ + + Q+ ++ + E + Sbjct: 124 DENGTFSEQKLQEYLANIKASSPQAYEQW---KNYEDQVALAAKETQYFNMIKAGVGATL 180 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 + + + D E+++ + ++ K + QY+ Sbjct: 181 LEGKQAYLLENNTVDVEYVKIPWTAVDESEAQVSKDEIKAYIKAHPDKYTVEAGRDLQYV 240 >gi|193083971|gb|ACF09646.1| peptidyl-prolyl cis-trans isomerase ppiC [uncultured marine crenarchaeote AD1000-56-E4] Length = 91 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 22/76 (28%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255 Q + E + K + ++ G Y + + +F + K Sbjct: 13 EKQSQALQLLEEIKKGKKFGAVAREVSTCPSSKKDGDLGYFTKGMMVKEFDEVAFKLQIG 72 Query: 256 NTTNPYVTQKGVEYIA 271 + P TQ G I Sbjct: 73 EVSEPVKTQFGYHLIK 88 >gi|192360509|ref|YP_001982979.1| putative peptidyl-prolyl cis-trans isomerase D [Cellvibrio japonicus Ueda107] gi|190686674|gb|ACE84352.1| putative peptidyl-prolyl cis-trans isomerase D [Cellvibrio japonicus Ueda107] Length = 284 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 28/315 (8%), Positives = 80/315 (25%), Gaps = 46/315 (14%) Query: 12 FIKLLTTYFVLIIFCIVPIVSY----KSWAMSSRIRTTINGEVITDGDISKRIALLKLQK 67 I + + L++ + + + KS +S+ + T+NGE IT + + + + Sbjct: 1 MIAMFSKKLTLLVTLFLCLPACDRADKSTEVSASVVATVNGEAITREQVDYMLERMLGAQ 60 Query: 68 I----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 EL + LI +++ S DS V Sbjct: 61 PLVPITRELRGKVLDSLIASKAMTLQVKSSMSEEDSQRVQRAVQA--------------- 105 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + + + + +EM + Sbjct: 106 --------------YEEELYVKEYLARYATPEPVTVEMVSAYYDAHPNEFGGGVLKHFQL 151 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 L + + ++ + S + + + + L Sbjct: 152 LLLRDSGDDKKRDAFLSAVESLKASTDWKARAGEWSRQLPIEYQE------GKYAPGLLD 205 Query: 244 PQFQNLLKKSQNN-TTNPYVTQKGVEYIAICDKRDLGGEIALK--AYLSAQNTPTKIEKH 300 + ++ + T++ K + + + D + + A + + ++ Sbjct: 206 ERLGKVIDQLGKQATSDLIYVDKAIYLVRVSDVVQTAPKPIAEVSADIRKKLAAQQLRAA 265 Query: 301 EAEYVKKLRSNAIIH 315 + + + Sbjct: 266 VKKATDDVVKTMDVK 280 >gi|157864608|ref|XP_001681014.1| PPIase; peptidyl-prolyl cis-trans isomerase/rotamase [Leishmania major strain Friedlin] gi|68124307|emb|CAJ07069.1| putative PPIase [Leishmania major strain Friedlin] Length = 115 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 19/77 (24%), Gaps = 1/77 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 V + K + + + G ++ F++ K Sbjct: 36 EAVTELQKWCQSINDGKVTFEEAARQRSDCSSYARGGDLGVFGPGEMMKPFEDATKSLEV 95 Query: 255 NNTTNPYVTQKGVEYIA 271 + VT GV I Sbjct: 96 GQVSGIVVTDSGVHIIK 112 >gi|163742798|ref|ZP_02150183.1| hypothetical protein RG210_15675 [Phaeobacter gallaeciensis 2.10] gi|161384053|gb|EDQ08437.1| hypothetical protein RG210_15675 [Phaeobacter gallaeciensis 2.10] Length = 613 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 34/385 (8%), Positives = 87/385 (22%), Gaps = 85/385 (22%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK- 64 LS+ + ++I V++ S + + ++ D ++ + + Sbjct: 5 MKKLSNTFVWILMGMLIIGLAGFGAVNFTGSVSS---VAVVGDQEVSVDDYARELQREQR 61 Query: 65 ------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 Q L+++ + LI QE G++ + + Sbjct: 62 ALEAQTGQRVPIAQMTALGLDRVVLGRLIAIAALDQESSDLGLSIGDQNLFDEISRIPAF 121 Query: 113 T---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML--------------- 154 G D + + + +V+ M Sbjct: 122 QDGTGAFNRDTYQYALDNIGLTEAAFEADLRRESARTLVQGAIMAGTEMPDTLRDTLTSY 181 Query: 155 --------------------KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + E E+ A + ++ + L + Sbjct: 182 VGARRSFDWLTVSEDSIALTEVEPSEDELRAFYDANIDQFTLPRTKVITYAALRPDALVD 241 Query: 195 QGFVQKRIKDA-------------EESRLRLPKDCNKLEKFASKIHDVSIG--------- 232 + + + RL A D++ Sbjct: 242 EIEIDAAALEQLFNDRSAEYQVPERRLVERLVFANRDAADSAKAQLDINGTTFDALVADR 301 Query: 233 -------KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IA 283 + DL Q++ + P + G I + + Sbjct: 302 GLSLQDVDLGDVTMGDLASAGQDVFAAQVGDVVGPLDSDLGPALFRINGRLEARVTSLED 361 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKL 308 +K L A+ + + +++ Sbjct: 362 VKDELRAELATDRARRLIETRSEEI 386 >gi|39997188|ref|NP_953139.1| hypothetical protein GSU2090 [Geobacter sulfurreducens PCA] gi|39984078|gb|AAR35466.1| hypothetical protein GSU2090 [Geobacter sulfurreducens PCA] gi|298506201|gb|ADI84924.1| conserved hypothetical protein [Geobacter sulfurreducens KN400] Length = 527 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 32/281 (11%), Positives = 80/281 (28%), Gaps = 12/281 (4%) Query: 45 TINGEVITDGDISK-------RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 + G +++ DI R E+++ ++ + E + Sbjct: 243 KVGGLEVSEADIQAWYQKNIDRYQGPAGILPLAEVKEKVREDARRFKAGQHAYELAAAAI 302 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + N AR G E+ + F +Q + L ++ + + + Sbjct: 303 NKNKATGDIGAVARALGAKTEETALFTAQQPAPALAGETELIRRAFI--LKEGELGGPVE 360 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + ++ K V + +K+ ++A+ + Sbjct: 361 TKKGIYLIKIKERKPAEVPPLAQIRAQVEEKAKTAKAVDLAKKKAEEAQAKLAKGDSTGL 420 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 L + + G + S + L + P + ++ + Sbjct: 421 TLRD-SGPFAFDAKGNIPTVGASPELMEAAFKLTTAAPAPKEPIRVGARWIAFRLKERTE 479 Query: 278 --LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 A K + + P K + +++++LRS A I Sbjct: 480 LNAANFAAQKEKIKQEILPRKQDDEYRKWIEELRSKAKIEI 520 >gi|71023841|ref|XP_762150.1| hypothetical protein UM06003.1 [Ustilago maydis 521] gi|46101742|gb|EAK86975.1| hypothetical protein UM06003.1 [Ustilago maydis 521] Length = 174 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 22/81 (27%), Gaps = 1/81 (1%) Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 Q+ K+ + + K + + + G + + F++ Sbjct: 91 KQDAIEQLKKFEQELQQDSSKDKFASLASVHSDCSSARAGGDLGFFQRGQMQKPFEDAAF 150 Query: 252 K-SQNNTTNPYVTQKGVEYIA 271 ++ T GV I Sbjct: 151 GLKPGELSSIVDTDSGVHLIY 171 >gi|281338941|gb|EFB14525.1| hypothetical protein PANDA_015066 [Ailuropoda melanoleuca] Length = 95 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-------KS 253 +I +A E + +++ G ++ + FQ Sbjct: 14 KIMEAMEKLKSGMRFSEVATQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGLDK 72 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 73 PVFTDPPVKTKFGYHIIMVEGKK 95 >gi|212636856|ref|YP_002313381.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella piezotolerans WP3] gi|212558340|gb|ACJ30794.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella piezotolerans WP3] Length = 92 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 23/77 (29%), Gaps = 4/77 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 ++ +D + + K +K +S G + + P F + Sbjct: 15 KELAEDIIKQLNKGAKFDVLAKKHSSCPSGKKGGHLGEFKKGAMVPAFDKV--CFTGELL 72 Query: 259 NP--YVTQKGVEYIAIC 273 P T+ G I + Sbjct: 73 TPHLVKTKFGWHVIKVL 89 >gi|149184601|ref|ZP_01862919.1| peptidyl-prolyl isomerase [Erythrobacter sp. SD-21] gi|148831921|gb|EDL50354.1| peptidyl-prolyl isomerase [Erythrobacter sp. SD-21] Length = 645 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 26/252 (10%), Positives = 67/252 (26%), Gaps = 23/252 (9%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR----------IRTTINGEVITDG 54 + T +F K + + F + ++ S +S+ + G I+ Sbjct: 1 MLTFFRNFFKTKIGLAIALAFLGLIGFAFASMDVSNTGAFGGVAGGDSVAVVGGSKISTA 60 Query: 55 DISKRIALLKLQKINGELE------------KIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++++ + + + ++ LI E++G +N V Sbjct: 61 ELNEAMDNALRRAREENPDVTMQTLIAEGEMDRVLEGLIDRYALMAWAEENGFRAGANLV 120 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 N Q G S ++ + ++ L Q + ++ Sbjct: 121 NSEIRQIPAARGPSGNFETAAYEAFLRNNSITDSQLRQQLRTTVYFQQAVFPALYGTQL- 179 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + Q + + E+R R + + ++ Sbjct: 180 PESIARTYARSFKERRSGGIATIPAALFAPQGDPTDAQLSEFYAENRSRFVRPERRTLRY 239 Query: 223 ASKIHDVSIGKA 234 A+ G Sbjct: 240 ATFDSSALGGSI 251 Score = 45.4 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 24/261 (9%), Positives = 58/261 (22%), Gaps = 20/261 (7%) Query: 48 GEVITDGDISKRIAL--LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 ITD + +++ Q + L + E I T + E+ Sbjct: 148 NNSITDSQLRQQLRTTVYFQQAVFPALYGTQLPESIARTYARSFKERRSGGI-------A 200 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + A + + + F + + + + +I A Sbjct: 201 TIPAALFAPQGDPTDAQLSEFYAENRSRFVRPERRTLRYATFDSSALGGSINPSDEDIAA 260 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 Q +P + + R + Sbjct: 261 YYQDNAEEYAARETRNLTQLIVPTREGAEALAARVR---------GGESFAQAASSSGLR 311 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC--DKRDLGGEIA 283 + + + + S+ T P + G + D + Sbjct: 312 TTQLDGRERSDIRSAASQAVADAYFSASEGAVTAPARSSLGWHIARVNSVDPQPARSLAE 371 Query: 284 LKAYLSAQNTPTKIEKHEAEY 304 ++ + K ++ AE Sbjct: 372 VRDSIVEVLREQKRQRGIAEL 392 >gi|255021292|ref|ZP_05293340.1| Peptidyl-prolyl cis-trans isomerase ppiD [Acidithiobacillus caldus ATCC 51756] gi|254969155|gb|EET26669.1| Peptidyl-prolyl cis-trans isomerase ppiD [Acidithiobacillus caldus ATCC 51756] Length = 516 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 20/237 (8%), Positives = 54/237 (22%), Gaps = 18/237 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYK-SWAMSSRIRTTINGEVITDGDISKR 59 M + + + + F + + Y S ++ ++G+ I+ +R Sbjct: 1 MLDAFRKLSQSWAAKIVLAVIALSFVLWGVSGYLFSNDSGEQVVAKVDGDKISAAIFQQR 60 Query: 60 I-------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 + + + LI L E K G+ + + Sbjct: 61 LHDAREHYAQVFGPEAAAQMAKDPSFAPDVLNGLIDNLLLAHEARKLGLQVPDSALAQKI 120 Query: 107 V---QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-NDFMLKYGNLEME 162 A S + L G+ F+ L + + + + E Sbjct: 121 EGISAFADKGKFSRAKYQEVLRANGLTPVKFEAMLRDSMLLEQLQAVPQILAVASRKDAE 180 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + + + ++ + ++ Sbjct: 181 SAWSWSQEYRDARVVQIPVRSFLKAATPTDAEVQSYYQQHQSDYALPAQVEVQYVTF 237 >gi|89093533|ref|ZP_01166481.1| peptidyl-prolyl cis-trans isomerase C [Oceanospirillum sp. MED92] gi|89082223|gb|EAR61447.1| peptidyl-prolyl cis-trans isomerase C [Oceanospirillum sp. MED92] Length = 93 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 8/72 (11%), Positives = 22/72 (30%), Gaps = 1/72 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQ 264 ++ +K++ G + F++++ K + P T+ Sbjct: 22 KKRLKLGNDFGKLAKKYSLCPSGKRHGDLGEFRRGQMVKPFEDVVFKKPLHEVHGPVKTR 81 Query: 265 KGVEYIAICDKR 276 G I ++ Sbjct: 82 FGWHLIETIYRK 93 >gi|88801328|ref|ZP_01116856.1| peptidylprolyl cis-trans isomerase [Polaribacter irgensii 23-P] gi|88781986|gb|EAR13163.1| peptidylprolyl cis-trans isomerase [Polaribacter irgensii 23-P] Length = 707 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 27/112 (24%) Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 ++ + Q R + G + + + P F++ Sbjct: 367 SRTKAQAEELADSILRVVKRSDSKFASLAKSLSSDTGSAAKGGDLDWFNYARMTPAFRDY 426 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 + T G I I D ++ + L Y S E Sbjct: 427 AFTNSKGAVGVVETPFGYHVIRIDDTKNTQKVLKLSTYASKIIPSEATENDF 478 Score = 40.4 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 13/125 (10%), Positives = 37/125 (29%), Gaps = 1/125 (0%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + SK+ I ++ + + + S + + +NGE I+ + ++ + Sbjct: 3 ILSKIRERSMFLIIIIGLALFAFVLDPSTLGDFFSSSKVNE-VGQVNGEAISRQEFAEAV 61 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 K + E A + L+K+ + + ++ Sbjct: 62 DQYKQNSRSEVSEMQAANAVWDNILRKKIYKNQLEDAGISVGEQDVWSEILKVPSVQDNP 121 Query: 121 SSFLD 125 + Sbjct: 122 QFQNE 126 >gi|254517142|ref|ZP_05129200.1| probable peptidyl-prolyl cis-trans isomerase transmembrane protein [gamma proteobacterium NOR5-3] gi|219674647|gb|EED31015.1| probable peptidyl-prolyl cis-trans isomerase transmembrane protein [gamma proteobacterium NOR5-3] Length = 296 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 31/301 (10%), Positives = 83/301 (27%), Gaps = 32/301 (10%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79 + ++FC + + + S I IT+ ++ + L+ + K+A + Sbjct: 2 ILAMMFCTIAQPTLGADPSSDVIVIKDGELEITEQEMQYALKLV-----PESVRKLAQDD 56 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 + + + + Sbjct: 57 ------------------PGTRYELLTEIVLPRKKAALASAFNPSQDEYWELRFAEIAAR 98 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + I ++ + + L +E + + + E +LF P + + Sbjct: 99 QKIISTKLLAEYPVPDFKALALERYTLQPEKYGLVPEERKGSHILFRSPPGLDREP-LRE 157 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQ-YLLESD--LHPQFQNLLK--KS 253 K E R +E ++ G ++ D + P F L Sbjct: 158 KATNVLAELRSGAVTFTEAVELYSEDPGTAKKGGLLDRWITYGDPSISPPFSEALFAVDQ 217 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + TQ G+ I + + + + ++ ++++ +++ S + Sbjct: 218 PGLYSEVTDTQFGLHIIRLEAIKPSRIQE--FDEVKSKVLTEIVKEYRTLAQQEINSRFL 275 Query: 314 I 314 I Sbjct: 276 I 276 >gi|162455703|ref|YP_001618070.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sorangium cellulosum 'So ce 56'] gi|161166285|emb|CAN97590.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sorangium cellulosum 'So ce 56'] Length = 175 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 9/129 (6%), Positives = 29/129 (22%), Gaps = 9/129 (6%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG-------FVQKRIKD 204 E + +++ + + + L + + + R ++ Sbjct: 44 VSAPIRAAEEDAAIERERAVIASQPKQIGARHLLVMHEGSKSKPEGLRRTRAEARARAQE 103 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYV 262 A + +++ + G + F + + Sbjct: 104 ALLKIRGGASFEEAVAEYSDEPGAAERGGDLGVFERGMMVKGFSDAAFALKIGEVSEIIE 163 Query: 263 TQKGVEYIA 271 T G I Sbjct: 164 TPFGFHIIQ 172 >gi|119774802|ref|YP_927542.1| cell wall hydrolase/autolysin [Shewanella amazonensis SB2B] gi|119767302|gb|ABL99872.1| cell wall hydrolase/autolysin [Shewanella amazonensis SB2B] Length = 92 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 7/76 (9%), Positives = 21/76 (27%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN- 255 ++ + + + ++++ G + F +++ K Sbjct: 12 KTREEAEKLKARIDKGEDFGKLAKQYSLCPSKRRSGDLGEFGPGQMVKAFDDVVFKKPIL 71 Query: 256 NTTNPYVTQKGVEYIA 271 P T+ G I Sbjct: 72 EVHGPVKTRFGFHLIQ 87 >gi|145589120|ref|YP_001155717.1| hypothetical protein Pnuc_0937 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047526|gb|ABP34153.1| hypothetical protein Pnuc_0937 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 487 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 26/256 (10%), Positives = 72/256 (28%), Gaps = 27/256 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M V ++++ F++ F + I SY + +NG+ IT ++ Sbjct: 1 MFDTVR-KHQKLLQIVLMLFIVPSFVMFGISSYSGFLDKETDLVKVNGKPITAQEVDSAA 59 Query: 61 ALLKLQ-------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 + + + + + EL+ + + + + + + Sbjct: 60 KRQAERVGGNIQIAQSLQFRQAILNELLQQRILGFAVINLRLQVGKEALIKSLQNIPQIR 119 Query: 114 GLSAED-------FSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------NDFML 154 L +D F L G+ + F A V ++ + Sbjct: 120 ALYRQDGSFDDVRFKQLLASNGLNEEQFYASQAFDLKISQFVNSVARTELPTPKLSEIVS 179 Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 E ++ + K + + L + + + + + + + Sbjct: 180 TLYETERQVQSLSFDAKEYINKVNPTQEELQAFYNANTKLFESPEYIDVEYIVLKADPKE 239 Query: 215 DCNKLEKFASKIHDVS 230 D A + +++ Sbjct: 240 DAKGFSAKADQFANMT 255 >gi|194466674|ref|ZP_03072661.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lactobacillus reuteri 100-23] gi|194453710|gb|EDX42607.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lactobacillus reuteri 100-23] Length = 311 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 32/284 (11%), Positives = 77/284 (27%), Gaps = 33/284 (11%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 LI + A ++ T NG IT+ + + K +Q++I Sbjct: 6 LIAIIAGAALMMPLAACGNKAVATTNGGKITESEYYSSMKQTSA-------GKQVLQQMI 58 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 ++ + +++ K + + + + + F YL Q Sbjct: 59 LDKVLEKQYGKEV--------------------SDKQVNAQYNTYKSEYGSDFNAYLQSQ 98 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 ++ +K +++ + ++ + Sbjct: 99 NLTEKSLKQQIRSNLLLTAA-ARHYSHITTKQINKQWTKYQPKVQTATILVGSKSDAEDI 157 Query: 202 IKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL--LESDLHPQFQNLLKKSQNN-- 256 I +S + + + + GK ++ L ++ K + Sbjct: 158 INQLNDSSNKYKTFKKLAKSKSTDSQTKNNGGKLPAFDNTDNQLDSAYKKAAFKLKTGEY 217 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 TT P T G + I + + G + L Q + Sbjct: 218 TTTPVKTDDGYQVIYMIEHPAKGKKSQHINDLKNQIVQENMNNQ 261 >gi|119592218|gb|EAW71812.1| protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Homo sapiens] Length = 80 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 22/81 (27%), Gaps = 8/81 (9%) Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKSQN 255 +A E + +++ G ++ + FQ Sbjct: 1 MEAMEKLKSGMRFNEVAAQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDKPV 59 Query: 256 NTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 60 FTDPPVKTKFGYHIIMVEGRK 80 >gi|322488477|emb|CBZ23723.1| peptidyl-prolyl cis-trans isomerase/rotamase,putative [Leishmania mexicana MHOM/GT/2001/U1103] Length = 115 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 9/77 (11%), Positives = 19/77 (24%), Gaps = 1/77 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 V + K + + + G ++ F++ K Sbjct: 36 EAVTELQKWHQSIEEGKMTFEEAARQRSDCSSYARGGDLGVFGPGEMMKSFEDATKSLEV 95 Query: 255 NNTTNPYVTQKGVEYIA 271 + VT G+ I Sbjct: 96 GQVSGIVVTDSGIHIIK 112 >gi|319779411|ref|YP_004130324.1| hypothetical protein TEQUI_1261 [Taylorella equigenitalis MCE9] gi|317109435|gb|ADU92181.1| hypothetical protein TEQUI_1261 [Taylorella equigenitalis MCE9] Length = 644 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 41/387 (10%), Positives = 91/387 (23%), Gaps = 86/387 (22%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK----RIA 61 F S ++ + ++ F Y ++S + +N E IT+ +K R+ Sbjct: 5 FRKHSKWVLFIIIILIVPSFVFFGTSKYSGMSISEKPLVKVNKEKITERQFNKSWTERLN 64 Query: 62 LLKLQKING---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 L+ Q N + + +++ + L Q K+ + V + Sbjct: 65 SLRDQLGNNFKVSEIDTPANRNLWLNKIVDDILITQTANKNKFFGSDSMVRSAIALDPKF 124 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQY----------------------------------- 137 ++ + ++Y Sbjct: 125 AVDGKFSMENYNAFLTSANITSQEYENYLRANTGINLVVEPLINSTLVPLTTLEELKKHV 184 Query: 138 -LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS---------- 186 + DF+ E E+ +K R V + Sbjct: 185 TKTREVQTKIFANEDFINAVSVDEKELEDWYKKNSEEKYRVPEYVNVEYFLLNQKAAVDL 244 Query: 187 -----------IPDNKLQNQGFVQKRIKDAEE---------SRLRLPKDCNKLEKFASKI 226 +N ++R + L NK E+F Sbjct: 245 VPQPNEDALKSYYENNKNRFSTEERRFVRHIQLDSEERAKAIYEELKTTPNKFEEFVLSD 304 Query: 227 H-----DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G+ +L +SD+ + + T P + + Sbjct: 305 SLDAGTKNNKGELGFLKKSDIPGIENTVFALDKPGITGPVKLGNSFHIFDVVQIEKAKVK 364 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKL 308 L + ++ +L Sbjct: 365 S--FEELKDTLVNEVKLQIASDKFAEL 389 >gi|227889497|ref|ZP_04007302.1| peptidylprolyl isomerase [Lactobacillus johnsonii ATCC 33200] gi|227849975|gb|EEJ60061.1| peptidylprolyl isomerase [Lactobacillus johnsonii ATCC 33200] Length = 298 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 33/301 (10%), Positives = 74/301 (24%), Gaps = 39/301 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + I + + T G IT+ ++ + + + + Sbjct: 8 AATVLAFAGIALSATACSGGKAVVTYKGGKITESQYYDKMK-------ESQAGQSTLASM 60 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 IV + + K + + F S L++ G+ + FK L Sbjct: 61 IVSDALESQYGKDVTQKQVDKEYN------KYKKQYGSQFDSVLEQNGMTASTFKDNLKT 114 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + + K + + + + + + + Sbjct: 115 NLLTEAAL--KHIKKITPAQEKKAWKSYQPEITVQHILVSK-----------------KS 155 Query: 201 RIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESD---LHPQFQNLLKKSQNN 256 +D + +K+++ GK +D K Sbjct: 156 TAEDVIKQLQDGGDFKKLAKKYSTDTATKNDAGKLPAFDSTDSTLDSSFKTAAFKLKTGE 215 Query: 257 TTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH--EAEYVKKLRSNAI 313 T P TQ G I + G K + Q + E + + A Sbjct: 216 ITTTPVKTQYGYHVIKMIKHPAKGTFKEHKKQIDNQIYQSMSEDQNVMRSVIATVLKRAD 275 Query: 314 I 314 + Sbjct: 276 V 276 >gi|196015559|ref|XP_002117636.1| hypothetical protein TRIADDRAFT_51090 [Trichoplax adhaerens] gi|190579805|gb|EDV19894.1| hypothetical protein TRIADDRAFT_51090 [Trichoplax adhaerens] Length = 130 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 11/87 (12%), Positives = 24/87 (27%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 ++ +A +++ G ++ + FQ + + Sbjct: 45 EKHSKVMEAMAKLKEGIAFNQVATQYSED-KARQGGDLGWMTRGSMVGPFQEAAFNLEPS 103 Query: 257 TT-------NPYVTQKGVEYIAICDKR 276 T P T+ G I I K+ Sbjct: 104 TVASPSYTDPPVKTKFGYHIIMIEGKK 130 >gi|71065417|ref|YP_264144.1| peptidylprolyl isomerase [Psychrobacter arcticus 273-4] gi|71038402|gb|AAZ18710.1| peptidylprolyl isomerase [Psychrobacter arcticus 273-4] Length = 92 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 7/77 (9%), Positives = 20/77 (25%), Gaps = 4/77 (5%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 ++ D + + +K ++ G + + F + Sbjct: 15 KELADDIIAKLKKGAQFDVLAKKHSTCPSGKKGGSLGEFKQGQMVQPFDKV--CFSGELF 72 Query: 259 NP--YVTQKGVEYIAIC 273 P T+ G + + Sbjct: 73 TPHLVKTKFGWHVVKVL 89 >gi|254469828|ref|ZP_05083233.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudovibrio sp. JE062] gi|211961663|gb|EEA96858.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudovibrio sp. JE062] Length = 628 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 20/193 (10%), Positives = 53/193 (27%), Gaps = 16/193 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--- 57 M + S+ + + +++ F + I + S ++ + I+ D Sbjct: 1 MLDALRNSVGSWFAKILIGLLVLSFAVWGIADVF-TGIGSTSVASVGDKEISAQDFQRAY 59 Query: 58 -KRIALLKLQKINGELEK---------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + + L + ++ + L+ E E K I + Sbjct: 60 SRELDQLSRRVGQPVTQEQAAAFGVPAQVLGRLVAEAALDNEASKLRIGVSDEAIIKTIQ 119 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI--WPDVVKNDFMLKYGNLEMEIPA 165 + G++ D + +++ Q + + + E + A Sbjct: 120 ETPAFQGVNGYDRNRLGQVLYNLGMSEDEFVMQQQLVAERQQLAEAVIGGIVVPETMLEA 179 Query: 166 NKQKMKNITVREY 178 + EY Sbjct: 180 FDKYAMEERTVEY 192 >gi|212690534|ref|ZP_03298662.1| hypothetical protein BACDOR_00016 [Bacteroides dorei DSM 17855] gi|237708010|ref|ZP_04538491.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 9_1_42FAA] gi|212666883|gb|EEB27455.1| hypothetical protein BACDOR_00016 [Bacteroides dorei DSM 17855] gi|229457996|gb|EEO63717.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 9_1_42FAA] Length = 446 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 18/199 (9%), Positives = 52/199 (26%), Gaps = 7/199 (3%) Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPD-VVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 ++ + Q W + +++ E + + + Sbjct: 61 NYKLKVHYAHDTGIDTLSAFRRQMAWYRGKLLKKYLVDAEKEEQTVRQLYLRSEQRLQTN 120 Query: 178 YLIRTVLFSIPDNKL---QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGK 233 IR S + Q++ V +++ + +++ G Sbjct: 121 DWIRIAHISKYLPQNVGRQDELRVLQQMDSVYAALQGGADFSALACRYSDDTTCKNMGGL 180 Query: 234 AQYLLES-DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292 ++ + ++ L +N + P+ + G+ I D++ + L Sbjct: 181 LPWMPVNKNMQEWIDKLASLEKNKISAPFYSPMGIHIIKWIDRKPGISFEEKREQLLNYL 240 Query: 293 TPTKIEKHEAEYVKKLRSN 311 + E R Sbjct: 241 -EKNGNRTWQELSAGQRER 258 >gi|109892824|sp|P0C1J8|PIN1_RHIOR RecName: Full=Peptidyl-prolyl cis-trans isomerase pin1; Short=PPIase pin1; AltName: Full=Parvulin pin1 Length = 150 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 9/97 (9%), Positives = 19/97 (19%), Gaps = 1/97 (1%) Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 R + + ++ + ++ G Sbjct: 50 KSRESRRPSSWREEHITRSKEEALKILTDFQHKIESGQETLSALATNYSDCTSAKRGGDL 109 Query: 235 QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 Y + F+ + P T GV I Sbjct: 110 GYFERGQMQKPFEEATFALQVGELSKPVWTDSGVHLI 146 >gi|148268312|ref|YP_001247255.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp. aureus JH9] gi|147741381|gb|ABQ49679.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp. aureus JH9] Length = 271 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 33/292 (11%), Positives = 81/292 (27%), Gaps = 24/292 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K++ V + + + + + A S+ +I+ +A + ++ Sbjct: 1 MKMINKLIVPVTASALLLGACGASATDSK-----ENTLISSKAGDVTVADTMKKIGKDQI 55 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + E++ + L +K + ++ + + G + + + Sbjct: 56 ANASFTEMLNKIL----ADKYKNKVNDKKIDEQIEKMQKQYGGKDKFEKALQQQ-----G 106 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 K K + EI + LI+ L Sbjct: 107 LTADKYKQNLRTAAYHKELLSDKIKISDSEIK-----EDSKKASHILIKVKSKKSDKEGL 161 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-L 250 ++ QK + +E K +K + G+ Y+L+ F+ Sbjct: 162 DDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKALF 221 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 K + + G I + K L + K++K + Sbjct: 222 KLKDGEVSEVVKSSFGYHIIKAD---KPTDFNSEKQSLKEKLVDQKVQKIQN 270 >gi|237725282|ref|ZP_04555763.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D4] gi|229436548|gb|EEO46625.1| peptidyl-prolyl cis-trans isomerase [Bacteroides dorei 5_1_36/D4] Length = 446 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 18/199 (9%), Positives = 52/199 (26%), Gaps = 7/199 (3%) Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPD-VVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 ++ + Q W + +++ E + + + Sbjct: 61 NYKLKVHYAHDTGIDTLSAFRRQMAWYRGKLLKKYLVDAEKEEQTVRQLYLRSEQRLQTN 120 Query: 178 YLIRTVLFSIPDNKL---QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGK 233 IR S + Q++ V +++ + +++ G Sbjct: 121 DWIRIAHISKYLPQNVGRQDELRVLQQMDSVYAALQGGADFSALACRYSDDTTCKNMGGL 180 Query: 234 AQYLLES-DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292 ++ + ++ L +N + P+ + G+ I D++ + L Sbjct: 181 LPWMPVNKNMQEWIDKLASLEKNKISAPFYSPMGIHIIKWIDRKPGISFEEKREQLLNYL 240 Query: 293 TPTKIEKHEAEYVKKLRSN 311 + E R Sbjct: 241 -EKNGNRTWQELSAGQRER 258 >gi|222151803|ref|YP_002560961.1| peptidyl-prolyl cis/trans-isomerase PrsA homolog [Macrococcus caseolyticus JCSC5402] gi|222120930|dbj|BAH18265.1| peptidyl-prolyl cis/trans-isomerase PrsA homolog [Macrococcus caseolyticus JCSC5402] Length = 303 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 94/303 (31%), Gaps = 27/303 (8%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 +++ K++ + + + + + DI K + Sbjct: 1 MTNLKKIMMPAALSVSILGLAACGNGGGETLVSSKA----GDVKQSDIMKEL-------G 49 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 N ++ K + Q + + LK++ +K + + ++ + Q Sbjct: 50 NEQIAKTSFQLIFNDVLKEKYGKKIDEDKINKETDKEI-------KKYGDEKTFEQILQQ 102 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + + K + +I N +K +I + Sbjct: 103 QSSGMTVEQYKKKRVTDEYQKQFLNDTIKISDKDIKDNAKKASHILIAVKSDSNKDGLSD 162 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 + K++K ++ ++ K ++ + G+ Y+++ F+ Sbjct: 163 KEAKAKAEEILKQVKANKDDFKKIAK-----KESDDTQSAKNNGELGYVVKGQTVEAFEK 217 Query: 249 L-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 K +N T+ G I D +D+ E K L+ K++ + YV+ Sbjct: 218 ALFKLKPGEISNIVKTEFGYHIIMAEDDKDIAKE---KDKLAQTIRQNKLQDNPKLYVQA 274 Query: 308 LRS 310 ++ Sbjct: 275 VQK 277 >gi|46125831|ref|XP_387469.1| hypothetical protein FG07293.1 [Gibberella zeae PH-1] Length = 470 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 29/85 (34%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A K +++ G + + L P+F+ + + + Sbjct: 387 EKHAKKEEALAKLNDGVKFDEVAREYSED-KARQGGSLGWKTKGSLDPKFEEVAFALETS 445 Query: 257 TT-NP----YVTQKGVEYIAICDKR 276 TT +P T G I + ++ Sbjct: 446 TTNSPKFVEVKTGFGYHIIMVEGRK 470 >gi|22218833|pdb|1J6Y|A Chain A, Solution Structure Of Pin1at From Arabidopsis Thaliana Length = 139 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 8/77 (10%), Positives = 18/77 (23%), Gaps = 1/77 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 V++ E+ + + G + F+ Sbjct: 60 AAVEQLKSIREDIVSGKANFEEVATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKV 119 Query: 255 NNTTNPYVTQKGVEYIA 271 + ++ T GV I Sbjct: 120 GDISDIVDTDSGVHIIK 136 >gi|296162711|ref|ZP_06845496.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. Ch1-1] gi|295887027|gb|EFG66860.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. Ch1-1] Length = 250 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 34/270 (12%), Positives = 72/270 (26%), Gaps = 26/270 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 I+ EV+ D+S+ I LLKL + LI + ++ + + Sbjct: 4 IVRIDDEVV---DVSEFIRLLKLTGQ--------FESLIEQIVRDKLTVHAAKKQGITVS 52 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 Q A + Q + + I + + + + E Sbjct: 53 ADEIQQRADQFRRVRGLHRATDMNQYLDALNVSLDEFEAFITDGLYQEKMLDEI-GNEAA 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + VL S K + + + Sbjct: 112 IKDYFALNSPKFDAIEVSHIVLDSEG-----------KAKEMISYLHDDPDSFADMAREH 160 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKG--VEYIAICDKRDLG 279 + + G +L L P + + + + P+ + E A+ K Sbjct: 161 SIADTREAGGVIGKVLRGSLKPDIEAKIFNAAVGDLLGPFPSADRSCFEIFAVTAKYPAT 220 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + A + + + E+V + R Sbjct: 221 LDADVAAEVRRLLRESWLIARAQEHVIEAR 250 >gi|77918484|ref|YP_356299.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Pelobacter carbinolicus DSM 2380] gi|77544567|gb|ABA88129.1| PPIase domain protein [Pelobacter carbinolicus DSM 2380] Length = 291 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 22/281 (7%), Positives = 50/281 (17%), Gaps = 34/281 (12%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 + T G +T D+ + LK ++ Sbjct: 22 SEQKKGDNVLATFEGGSLTVEDVQAHLRKLKKNSRYRNNPELL----------------- 64 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + HA N + + Sbjct: 65 --------TPEYAFDHAVNMEMVIAKGLKENLHLDPNIRAEIHGFMANLFLKVMQDRLVP 116 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 E + + I + + + Sbjct: 117 QIDKARFTEEEVKAYFDAHPESYVTPALYDVRIIKAADKAELESLVAELGGGLTFEEAVR 176 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272 G P ++ +++K + P + + Sbjct: 177 THSTDAA------TREKGGAVGRRPLKRFRPDWRGIVEKLEPGKVSEPTAIGDSWYLLKL 230 Query: 273 CDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 K + KAY+ T+ + +KL+ Sbjct: 231 EGKTEPVSHVYEDKKAYVRNDLLYTRYREAWQGTYEKLKKE 271 >gi|255082788|ref|XP_002504380.1| peptidyl-prolyl cis-trans isomerase [Micromonas sp. RCC299] gi|226519648|gb|ACO65638.1| peptidyl-prolyl cis-trans isomerase [Micromonas sp. RCC299] Length = 196 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 34/118 (28%), Gaps = 9/118 (7%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 E+ + + G ++ +F+ + T+ T Sbjct: 22 EQIAAGVATFAELAATHSKCPSGKQGGALGWISRGQTVGEFERAAFTTPVGGTSKATTSF 81 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY-VKKLRSN-----AIIHYY 317 GV I + D R I +S Q+ +E E + +R A I + Sbjct: 82 GVHLIEVLDARANAPTIV---DVSIQDLQEVLEGDLDEVNLIDVREQNEWDAARIEAF 136 >gi|198425666|ref|XP_002128194.1| PREDICTED: similar to Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 (Rotamase Pin4) (PPIase Pin4) (Parvulin 14) (hPar14) (Par14) (Peptidyl-prolyl cis/trans isomerase EPVH) [Ciona intestinalis] Length = 128 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 27/87 (31%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK---- 252 + +A E K ++++ S G +++ + FQ Sbjct: 43 EKHSKCMEAMEKIKAGMKFNEVAQQYSED-KARSGGDLGWMIRGSMVGPFQEAAFALPVS 101 Query: 253 ---SQNNTTNPYVTQKGVEYIAICDKR 276 S T P T+ G I + K+ Sbjct: 102 SLASPKYTDPPVKTKFGYHIIMVEGKK 128 >gi|163736555|ref|ZP_02143974.1| putative peptidyl-prolyl cis-trans isomerse D [Phaeobacter gallaeciensis BS107] gi|161390425|gb|EDQ14775.1| putative peptidyl-prolyl cis-trans isomerse D [Phaeobacter gallaeciensis BS107] Length = 613 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 34/385 (8%), Positives = 85/385 (22%), Gaps = 85/385 (22%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK- 64 LS+ + ++I V++ S + + ++ D ++ + + Sbjct: 5 MKKLSNTFVWILMGMLIIGLAGFGAVNFTGSVSS---VAVVGDQEVSVDDYARELQREQR 61 Query: 65 ------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 Q L+++ + LI QE G++ + + Sbjct: 62 ALEAQTGQRVPIAQMTALGLDRVVLGRLIAIAALDQESSDLGLSIGDQNLFDEISRIPAF 121 Query: 113 T---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML--------------- 154 G D + + + +V+ M Sbjct: 122 QDGTGAFNRDTYQYALDNIGLTEAAFEADLRRESARTLVQGAIMAGTEMPDTLRDTLTSY 181 Query: 155 --------------------KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 E E+ + ++ + L + Sbjct: 182 VGARRSFDWLTVSEESIALTAVEPSEDELRTFYDANIDQFTLPRTKVITYAALRPDALVD 241 Query: 195 QGFVQKRIKDA-------------EESRLRLPKDCNKLEKFASKIHDVSIG--------- 232 + + + RL A D++ Sbjct: 242 EIEIDAAALEQLFNDRSAEYQVPERRLVERLVFANRDAADSAKAQLDINGTTFDALVADR 301 Query: 233 -------KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IA 283 + DL Q++ N P + G I + + Sbjct: 302 GLSLQDVDLGDVTMGDLASAGQDVFAAQVGNVVGPLDSDLGPALFRINGRLEARVTSLED 361 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKL 308 +K L A+ + + +++ Sbjct: 362 VKDELRAELATDRARRLIETRSEEI 386 >gi|289550444|ref|YP_003471348.1| Foldase protein PrsA precursor [Staphylococcus lugdunensis HKU09-01] gi|289179976|gb|ADC87221.1| Foldase protein PrsA precursor [Staphylococcus lugdunensis HKU09-01] Length = 322 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 28/252 (11%), Positives = 63/252 (25%), Gaps = 13/252 (5%) Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 ++ K E I T + K + V+ + + Sbjct: 44 ADVMKKIGNEQIANTSFSIMLNKILEDKYKDKVDTKDIDDEIKQEQKKYGGKDQFESTLK 103 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 Q K K + ++ + LI+ Sbjct: 104 QQGMSLDDYKQQKKLAAYQKQLLADKIKVSDKDVK-----DNSKKASHILIKVKSKDSDK 158 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQN 248 L ++ +K + ++ K +K + G Y+++ + +F+ Sbjct: 159 EGLSDKKAKEKAEEIQKQVEKDPSKFGEIAKKESMDSSSAKKDGSLGYVIKGQMVDEFEK 218 Query: 249 L-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE---KHEAEY 304 + + T G I + KA + + K++ K + Sbjct: 219 ALFDLKEGKVSKVIKTDYGYHIIKAD---KESDFNSEKANIKEKMIEQKVQKNPKLLTDA 275 Query: 305 VKKLRSNAIIHY 316 K L + Y Sbjct: 276 YKDLLDQYKVDY 287 >gi|239637879|ref|ZP_04678840.1| foldase protein PrsA [Staphylococcus warneri L37603] gi|239596442|gb|EEQ78978.1| foldase protein PrsA [Staphylococcus warneri L37603] Length = 330 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 86/313 (27%), Gaps = 31/313 (9%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + F K++ + ++ I + + + + +I Sbjct: 1 MKAFNKIMIPVTASALLLGACGSDSTDSKENTLISSKAGDVK-----VEDVMKKIGKDQI 55 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + IA+ +++ + K D+ ++ + + G + S + Sbjct: 56 ASKSFSIALDKILADKYK--------DKVDTKDIDKDIKKEEKQYGGKEQFESVLKQQ-- 105 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 Q K K + EI LI+ Sbjct: 106 ---GMSMDEYKDQKRLSAYQKELLNDKIKVSDKEIK-----DNTKKASHILIKVKSKDSD 157 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQF- 246 L ++ QK + +E K +K + K G Y+ + + F Sbjct: 158 KEGLSDKKAKQKAEEIQKEVSKDPSKFGEIAKKESMDKSTAKKDGSLGYVTKGQMMESFD 217 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE---KHEAE 303 + L K + T T G I + K+ L ++ KI+ K + Sbjct: 218 KALFKLKEGEVTKVVKTDYGYHIIKAD---KETDFNSEKSNLKSKILEQKIQKDPKLLTD 274 Query: 304 YVKKLRSNAIIHY 316 K++ + Y Sbjct: 275 AYKEILDEYKVDY 287 >gi|38637935|ref|NP_942909.1| peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha H16] gi|32527273|gb|AAP86023.1| probable peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha H16] Length = 250 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 16/154 (10%), Positives = 44/154 (28%), Gaps = 5/154 (3%) Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + + + +LF + + + + R ++ Sbjct: 84 YDSRPERFRDGEWVEADHILFQVTPRVPLD-ALREIAAQTLALVRGDPSTFAEHARALSN 142 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKK--SQNNTTNPYVTQKGVEYIAICDKRDLG--G 280 V+ G+ + + P+F+ L T+ G+ + I ++ Sbjct: 143 CPSGVNGGRLGRVFRGETAPEFERALFGALQDGVLPQLVETRFGLHIVRILERYPGTRLP 202 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 A++ ++ ++ +Y L A I Sbjct: 203 FDAVRGDIARALAAAARDRAWKQYASLLIGRARI 236 >gi|226944969|ref|YP_002800042.1| peptidyl-prolyl cis-trans isomerase [Azotobacter vinelandii DJ] gi|226719896|gb|ACO79067.1| peptidyl-prolyl cis-trans isomerase [Azotobacter vinelandii DJ] Length = 92 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 5/77 (6%), Positives = 17/77 (22%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 + ++ + + G + L ++ + Sbjct: 12 ASEAEAARLKQRLAGGEDFARLARRHSLCPSGKRGGDLGEIRPGQLVRPIDQVIFRKALR 71 Query: 256 NTTNPYVTQKGVEYIAI 272 P +Q G + + Sbjct: 72 EIHGPVKSQFGYHLVQV 88 >gi|152955221|emb|CAM59671.1| parvulin-type peptidyl-prolyl cis/trans isomerase [Lotus japonicus] Length = 122 Score = 53.5 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 8/76 (10%), Positives = 17/76 (22%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 V + E+ + + + G + F+ Sbjct: 44 AVAQLSTLREDILSGKANFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVG 103 Query: 256 NTTNPYVTQKGVEYIA 271 + + T GV I Sbjct: 104 DISEIVDTDSGVHIIK 119 >gi|24654671|ref|NP_728511.1| CG32845 [Drosophila melanogaster] gi|23092688|gb|AAN11433.1| CG32845 [Drosophila melanogaster] Length = 386 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 13/196 (6%), Positives = 41/196 (20%), Gaps = 1/196 (0%) Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 G S + K + + + + + Sbjct: 75 FGWEERIAHSTKECYFYDTITRKVHFTLPPSHHREKDRNAWGAILGDYSDFNDQLRCRHI 134 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + R + + Q + K + + + + + G Sbjct: 135 LVKHSESDRCSSYRERMVRRTKQEALNKIMHARDLIQSGKFEFAELANMISDCCSARHGG 194 Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 L + F+ + + + T+ G + + + + Sbjct: 195 DLGPLSLTQTPFVFERNILLLKDGELSEIFQTKAGYHILLRTPINYINYSTKNRRRRLKK 254 Query: 292 NTPTKIEKHEAEYVKK 307 + ++KK Sbjct: 255 IFIANEKAKSKAHLKK 270 >gi|265754204|ref|ZP_06089393.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_33FAA] gi|263234913|gb|EEZ20468.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_33FAA] Length = 427 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 18/199 (9%), Positives = 52/199 (26%), Gaps = 7/199 (3%) Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPD-VVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 ++ + Q W + +++ E + + + Sbjct: 42 NYKLKVHYAHDTGIDTLSAFRRQMAWYRGKLLKKYLVDAEKEEQTVRQLYLRSEQRLQTN 101 Query: 178 YLIRTVLFSIPDNKL---QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGK 233 IR S + Q++ V +++ + +++ G Sbjct: 102 DWIRIAHISKYLPQNVGRQDELRVLQQMDSVYAALQGGADFSALACRYSDDTTCKNMGGL 161 Query: 234 AQYLLES-DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292 ++ + ++ L +N + P+ + G+ I D++ + L Sbjct: 162 LPWMPVNKNMQEWIDKLASLEKNKISAPFYSPMGIHIIKWIDRKPGISFEEKREQLLNYL 221 Query: 293 TPTKIEKHEAEYVKKLRSN 311 + E R Sbjct: 222 -EKNGNRTWQELSAGQRER 239 >gi|255711148|ref|XP_002551857.1| KLTH0B01540p [Lachancea thermotolerans] gi|238933235|emb|CAR21419.1| KLTH0B01540p [Lachancea thermotolerans] Length = 161 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 12/153 (7%), Positives = 44/153 (28%), Gaps = 7/153 (4%) Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK------NITVREYL 179 + K P+ ++ + G ++ ++ ++ Sbjct: 6 PEPWTVRFSKSKRREYFFHPETKQSQWEEPEGTDHQQLKQYLADHPLRVRCLHLLIKHKD 65 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 R ++ ++ + + ++ + + + + + G + Sbjct: 66 SRRPASHRSEHITLSKDEALQELAAYQQRLEQGERFEDLARERSDCSSFKRGGDLGFFAR 125 Query: 240 SDLHPQFQNLLKKSQNN-TTNPYVTQKGVEYIA 271 ++ P F+++ + + P T GV I Sbjct: 126 GEMQPAFESVAFALPVSAVSAPVDTDSGVHLIK 158 >gi|145640429|ref|ZP_01796013.1| thymidylate kinase [Haemophilus influenzae R3021] gi|145275015|gb|EDK14877.1| thymidylate kinase [Haemophilus influenzae 22.4-21] Length = 137 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 58/141 (41%), Gaps = 8/141 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 + + + V++ S A R+ T++G + + + + Sbjct: 1 MKKFILKSFLLATLGCVAFTSMAQAEERVVATVDGIPVLESQV-------RANMGKKGDR 53 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNA 113 Query: 134 FKQYLAIQSIWPDVVKNDFML 154 F+Q +A Q + V F Sbjct: 114 FRQQIANQMVMGLYVTKLFKK 134 >gi|260946952|ref|XP_002617773.1| hypothetical protein CLUG_01232 [Clavispora lusitaniae ATCC 42720] gi|238847645|gb|EEQ37109.1| hypothetical protein CLUG_01232 [Clavispora lusitaniae ATCC 42720] Length = 174 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 17/162 (10%), Positives = 44/162 (27%), Gaps = 2/162 (1%) Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 +S + Q ++ ++ + + + F + + Sbjct: 10 CIRVSKTHNKEYFLNQATQESSWEPPYGTDTAKLEAYLDKFRANGMKPVVAEDGKIRASH 69 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVS 230 + R + PD ++ +K ++ L K + + + S Sbjct: 70 LLIKNVTSRRPKSWKSPDPVTTSRDESIALLKGYQKRILNGEVKLADLAKTESDCSSHAS 129 Query: 231 IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + + P F+ + ++ T GV I Sbjct: 130 GGDLGFFGRGQMQPAFEEAAFALNVGEFSDIVETDSGVHLIQ 171 >gi|195391926|ref|XP_002054610.1| GJ22713 [Drosophila virilis] gi|194152696|gb|EDW68130.1| GJ22713 [Drosophila virilis] Length = 130 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 26/87 (29%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q +I +A E K ++ G + + + FQ+ + Sbjct: 45 EKQGKIMEALEKLKAGQKFPEVAAAYSED-KARQGGDLGWQIRGAMVGPFQDAAFALPIS 103 Query: 257 TT-------NPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 104 TVNSPVYTDPPIKTKFGYHIIMVEGKK 130 >gi|159475603|ref|XP_001695908.1| peptidyl-prolyl cis-trans isomerase, parvulin-type [Chlamydomonas reinhardtii] gi|158275468|gb|EDP01245.1| peptidyl-prolyl cis-trans isomerase, parvulin-type [Chlamydomonas reinhardtii] Length = 255 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 8/91 (8%), Positives = 20/91 (21%), Gaps = 1/91 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + P + + + + + G Sbjct: 161 RPSSWKEPVVTRTREEALAMIEHFHSMLVKGEVEFAALAAQESHCSSAKRGGDLGEFGRG 220 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 ++ F++ + P + GV I Sbjct: 221 EMQKPFEDATYALKVGELSGPVFSDSGVHLI 251 >gi|311744939|ref|ZP_07718724.1| putative peptidyl-prolyl cis-trans isomerase [Algoriphagus sp. PR1] gi|126577446|gb|EAZ81666.1| putative peptidyl-prolyl cis-trans isomerase [Algoriphagus sp. PR1] Length = 702 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 31/111 (27%), Gaps = 2/111 (1%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 K + +LFS + V+ + ++ ++ Sbjct: 336 YKISDQYEGAARMRASHILFSTEGMDDAAKANVRAQAEEVLADLKGGGNFALAASQYGQD 395 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICD 274 + G Y ++D F + KS+ N T+ G + + Sbjct: 396 GTSQNGGDLGYFKKADFVEPFAEAVFAAKSEGLINNLVETEYGFHIVEVTG 446 >gi|195131267|ref|XP_002010072.1| GI15719 [Drosophila mojavensis] gi|193908522|gb|EDW07389.1| GI15719 [Drosophila mojavensis] Length = 164 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 8/110 (7%), Positives = 23/110 (20%), Gaps = 1/110 (0%) Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + P Q + + + R + + + + Sbjct: 51 DAPNEVQCLHLLVKHKGSRRPSSWREENITRTKEEAQMLLEIYRNKIVNNEATFEELARS 110 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 ++ G + F+ ++ T G+ I Sbjct: 111 YSDCSSAKRGGDLGKFGRGQMQAPFEKAAFALKVGQLSDIVDTDSGLHII 160 >gi|170055273|ref|XP_001863510.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Culex quinquefasciatus] gi|167875254|gb|EDS38637.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Culex quinquefasciatus] Length = 135 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 25/87 (28%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q +I +A E ++ G + + FQ+ + + Sbjct: 50 EKQSKILEAMEKLKEGQPFNVVATAYSED-KATKGGDLGWQPRGAMVGPFQDAAFELPIS 108 Query: 257 TTN-------PYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 109 TIGTPRYTDPPIKTKFGYHIIMVEGKK 135 >gi|149042165|gb|EDL95872.1| rCG36372, isoform CRA_b [Rattus norvegicus] Length = 80 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 22/81 (27%), Gaps = 8/81 (9%) Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKSQN 255 +A E + +++ G ++ + FQ Sbjct: 1 MEAMEKLKSGMRFSEVATQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDKPV 59 Query: 256 NTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 60 FTDPPVKTKFGYHIIMVEGRK 80 >gi|224476899|ref|YP_002634505.1| putative foldase protein prsA 1 [Staphylococcus carnosus subsp. carnosus TM300] gi|222421506|emb|CAL28320.1| putative foldase protein prsA 1 [Precursor] [Staphylococcus carnosus subsp. carnosus TM300] Length = 330 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 31/243 (12%), Positives = 66/243 (27%), Gaps = 10/243 (4%) Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 ++ K + I + + + K S+ V+ + + Sbjct: 44 EDVMKKIGNDQIANSSFEILLGKLLEKKYSDKVDTKDIDQQIKDEQKQYGGKDQFESALK 103 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 Q K M K + E+ LI+ Sbjct: 104 QQGMSLNDYKEQKKLQAYQKQLLMDKVKVSDKELK-----DDTKKASHILIKVKSDDKDK 158 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQF-Q 247 L ++ +K + +E K +K + K G Y+++ + F + Sbjct: 159 EGLSDKEAKKKAEEIHKEVEKNPDKFGEIAKKESMDKASAKKDGSLGYVIKGQMVKPFDK 218 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 L K + ++ T G I + ++ L +Q K++K V Sbjct: 219 ELFKLKDSQISDVVKTDYGYHIIKAD---KPTDFSSERSKLKSQIIQNKVQKDPQILVDA 275 Query: 308 LRS 310 + Sbjct: 276 YKD 278 >gi|153814526|ref|ZP_01967194.1| hypothetical protein RUMTOR_00740 [Ruminococcus torques ATCC 27756] gi|317500569|ref|ZP_07958790.1| hypothetical protein HMPREF1026_00733 [Lachnospiraceae bacterium 8_1_57FAA] gi|331089331|ref|ZP_08338232.1| hypothetical protein HMPREF1025_01815 [Lachnospiraceae bacterium 3_1_46FAA] gi|145848020|gb|EDK24938.1| hypothetical protein RUMTOR_00740 [Ruminococcus torques ATCC 27756] gi|316898002|gb|EFV20052.1| hypothetical protein HMPREF1026_00733 [Lachnospiraceae bacterium 8_1_57FAA] gi|330405512|gb|EGG85044.1| hypothetical protein HMPREF1025_01815 [Lachnospiraceae bacterium 3_1_46FAA] Length = 356 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 30/324 (9%), Positives = 74/324 (22%), Gaps = 22/324 (6%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-- 66 + F K + + + + T+ E + G ++ +++ Q Sbjct: 1 MVRFGKKAALLAMAGVLTAASVTGCSGAIDAEATVVTVGKEKVPLGVVNFYARMMQGQYE 60 Query: 67 ---------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 + +K + + ++ E Sbjct: 61 TYYAGMMGTTAEELWTQDAGDDKTYEESVKDSVMEAVENMYLISQHSGEYEVVLTEDEKE 120 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 +AE F + + + + +++ K E ++++ + Sbjct: 121 AIQKAAEQFDKDNKDESKEAVSGYRKDIEKYLELMTIQSKMSEKMREGVNEEVSDEEAAQ 180 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 Y T K AE R + A +V Sbjct: 181 KSMEYVYFSYTSTDESGSVTELTDEEKAKAKSTAETIAERAKAGEDFAAVAAELGTEVQK 240 Query: 232 GKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 S + ++ + T + GV + + A Sbjct: 241 TAFDAKSTSPDAALIEAANALAAEGDVTGAIESDAGVYVAKLTS----LLDREATDQKKA 296 Query: 291 QNTPTKIEKHEAEYVKKLRSNAII 314 + ++ +KK R I Sbjct: 297 SIIEERKQEQYDSLLKKWRKETDI 320 >gi|332861031|ref|XP_001139476.2| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like [Pan troglodytes] Length = 94 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E + +++ G ++ + FQ Sbjct: 13 KIMEAMEKLKSGMRFNEVAAQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDK 71 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 72 PVFTDPPVKTKFGYHIIMVEGRK 94 >gi|303327131|ref|ZP_07357573.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3] gi|302863119|gb|EFL86051.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3] Length = 373 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 80/288 (27%), Gaps = 33/288 (11%) Query: 40 SRIRTTINGEVIT----DGDISKRIALLKLQK-----INGELEKIAVQELIVETLKKQEI 90 + T+NGE + + R A L + A+ LI+ L +QE+ Sbjct: 30 EGVVATVNGEPVHLRSVQSLLDSRSAALGTLQSSSLENMKLRYGEALGTLIIHALVRQEL 89 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 E I ++ Q D S FL + + + ++ + K Sbjct: 90 EHRQIPVGDAALDLAVAQV--RGDYEPGDLSRFLADESLDEADWQALMRDHLAMLTFEKR 147 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + E+ A ++ + + L + + Sbjct: 148 VLLSGIRVGLDEVRAYYREHQADFQLPETLDLCL----------------ISGEERAALD 191 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG-VEY 269 K V + + ++ P + + P Q G + Sbjct: 192 VFCAAFPAGRKTPRSDLLVQCLE---VRGDEVPPPWNKDTSVLKPGACAPARRQNGSWQT 248 Query: 270 IAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 +A+ +++ AY + K ++++ S A+I Sbjct: 249 VALVERQKAHSLDMADAYPLIEHILLEQKKNAAFEQWLEGSLSRAVIK 296 >gi|327480810|gb|AEA84120.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas stutzeri DSM 4166] Length = 98 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 6/77 (7%), Positives = 19/77 (24%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 + ++ K+++ G + + ++ K Sbjct: 18 KTEAEAAQLKKRLANGEAFDVLARKYSTCPSGKKGGDLGEVRLGQMVRSIDQVIFKKPLR 77 Query: 256 NTTNPYVTQKGVEYIAI 272 P +Q G + + Sbjct: 78 EVHGPVKSQFGYHLVQV 94 >gi|72110370|ref|XP_788025.1| PREDICTED: similar to peptidyl-prolyl cis/trans isomerase [Strongylocentrotus purpuratus] gi|115972960|ref|XP_001189684.1| PREDICTED: similar to peptidyl-prolyl cis/trans isomerase [Strongylocentrotus purpuratus] Length = 152 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 9/106 (8%), Positives = 23/106 (21%), Gaps = 1/106 (0%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + R + +Q + + + Sbjct: 43 KVRCSHLLVKHRDSRRPASWKDDRITRTKDDALQILKGHRAKIVAGDVTLGDLASTESDC 102 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 G + + + F+ K ++P T G+ I Sbjct: 103 SSAHKKGDLGFFGRNQMQKPFEEASFKLEVGQMSDPVFTDSGIHII 148 >gi|170690702|ref|ZP_02881868.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia graminis C4D1M] gi|170143951|gb|EDT12113.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia graminis C4D1M] Length = 250 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 31/270 (11%), Positives = 72/270 (26%), Gaps = 26/270 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 I+ EV+ D+ + I LLKL + LI + ++ + + Sbjct: 4 IVRIDDEVV---DVGEFIRLLKLTGQ--------FESLIEQIVRDKLTVHAAKKQGIVVT 52 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + A + Q + + I + + + + + Sbjct: 53 ADDIQERADQFRRVRGLHRATDMNQYLDVLNVSLDEFEAFITDGLYQEKMLDQV-GNDAA 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + VL S K + R + + Sbjct: 112 VKDYFALNSPKFDAIEVSHIVLDSEG-----------KAKEMISYLRDDPDSFADMAREH 160 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKG--VEYIAICDKRDLG 279 + + G +L L P + + + + P+ + E A+ K Sbjct: 161 SIADTREAGGVIGKVLRGSLKPDIEAKIFNAAVGDLLGPFPSADRSCFEIFAVTAKYPAT 220 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + A + + + E+V + R Sbjct: 221 LDADVAAEVRRLLRESWLIARAQEHVIEAR 250 >gi|145609147|ref|XP_367478.2| hypothetical protein MGG_07389 [Magnaporthe oryzae 70-15] gi|145016566|gb|EDK00996.1| hypothetical protein MGG_07389 [Magnaporthe oryzae 70-15] Length = 178 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 10/177 (5%), Positives = 29/177 (16%), Gaps = 3/177 (1%) Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 D + S F + + + Sbjct: 1 MADQHPETGLPPNWEVRLSKSKNLPYYFNTSNTTSRWEPPPGTDTDKLKQYM--GKYHSS 58 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + + + R + + + + + Sbjct: 59 ALPSDSPQAGQIRAAHLLIKHRDSRRPSSWKEENITRTKEDARRIIEAHKDRIASGEASL 118 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + G + D+ +F+ + T G+ I Sbjct: 119 AALATTESDCSSARKRGDLGFFGRGDMQKEFEEAAFALKPGEISGVVDTASGLHLIE 175 >gi|322834954|ref|YP_004214981.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rahnella sp. Y9602] gi|321170155|gb|ADW75854.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rahnella sp. Y9602] Length = 122 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 22/78 (28%), Gaps = 1/78 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 + + D E +K ++ G + + P F ++ + Sbjct: 42 KEEAQALDLLEQLKNGGDFEKLAKKHSTCPSGKKGGHLGEFKQGAMVPAFDKVVFSAPLI 101 Query: 256 NTTNPYVTQKGVEYIAIC 273 P TQ G I I Sbjct: 102 EPQGPLHTQFGYHIIKIL 119 >gi|294788519|ref|ZP_06753761.1| putative peptidyl-prolyl cis-trans isomerase [Simonsiella muelleri ATCC 29453] gi|294483396|gb|EFG31081.1| putative peptidyl-prolyl cis-trans isomerase [Simonsiella muelleri ATCC 29453] Length = 609 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 37/391 (9%), Positives = 91/391 (23%), Gaps = 85/391 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIV-SYKSWAMSSRIRTTINGEVITDGDISKR 59 M K+F S+ LI + S S+ +++ I ++IT + Sbjct: 1 MKIKMFASIEKHRTTAQVLLALIGISFIGFGASQFSFGSNNQYIVKIGDQIITRYQLDNA 60 Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR----NTGL 115 + G + ++L+ + ++ G++ + V + N Sbjct: 61 VR-----ANQGATREAVFRQLMNRAYLTEGAKQLGLSISETELKQSIVNNKNFHDANGKF 115 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-------------------------- 149 S E F L G+ + F + + + K Sbjct: 116 STELFKQILASNGLSEQQFLESERETLLLESIGKILGSNVVADSQVAQFLNSTMAMRKIR 175 Query: 150 ------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 F K + + + ++ L + V Sbjct: 176 NVGVNPQAFESKVKIDDASLKKFYDANQKSYTLPQAVQFEFVRFSPQTLAEKETVSDEEV 235 Query: 204 DAEESRLR---------------LPKDCNKLEKFAS-----------------------K 225 + ++ + +K ++ A Sbjct: 236 KQAQQDVQNSSTNKREIAHILIPFGSNKDKAKEEAQKIAKEAQANPDKFAELAKKYSQDS 295 Query: 226 IHDVSIGKAQYLLES---DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 G + ++ + G I + + Sbjct: 296 DSKDKSGIIGEFSAQGNLVNDAFKKAAFGVESGGVSDVVESNFGYHIIRAKNLGNATASD 355 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 A +A+ K ++ + ++L + A Sbjct: 356 DTAARDAAKL--KKAQQTYTKLREELSAAAF 384 >gi|205372831|ref|ZP_03225640.1| protein export protein prsA [Bacillus coahuilensis m4-4] Length = 242 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 24/274 (8%), Positives = 69/274 (25%), Gaps = 41/274 (14%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70 ++ T ++ ++ + + +IT+ D+ +L Sbjct: 4 GYMYKRTVSLGIVSLLLLSGC------NNQEVIVEAENTLITEEDLYN-----QLLNNYR 52 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + A+++L + + + S + G E++ + Sbjct: 53 PQVEQALRDLTLLHILE-----QNYDVSSEELQLELENAKEALGSQYEEYLNEYQIN--- 104 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 ++ Q + + + E ++ + Sbjct: 105 ----EEQFKEQLALQVLQRKAAISTLEATEKDLQDFYTTWTPA------------INVRH 148 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL----ESDLHPQF 246 L + K++ D +S + S G + ++ Sbjct: 149 ILVSDKETAKKVLDELQSGTAFEDLAETYSIDSLTAS--SGGNLGTISYLERDAFSTEML 206 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 Q + + N + P + G + I +K Sbjct: 207 QAMDELQVNEISQPIESPYGFHIVEITEKERKKT 240 >gi|297568735|ref|YP_003690079.1| hypothetical protein DaAHT2_0756 [Desulfurivibrio alkaliphilus AHT2] gi|296924650|gb|ADH85460.1| hypothetical protein DaAHT2_0756 [Desulfurivibrio alkaliphilus AHT2] Length = 544 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 28/261 (10%), Positives = 74/261 (28%), Gaps = 16/261 (6%) Query: 58 KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 + +A L L N E +A ++ ++ + + V L + Sbjct: 278 EELADLVLIDNNQEPITVAQFWAVLGREQEFRRRHQFAAEEFERLKQRVVNGIIAQTLIS 337 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 + + + Q+ + ++ + E EI Q+ + R Sbjct: 338 WEADARDYHRREPLAPIYQFYRQHRLIQELDARLIQPRTVVEEAEIEDYYQRHPELFTRP 397 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 + +LF+ P + + R + + + + + + Sbjct: 398 EELSFMLFTGPAELVDD-------------LRREIVGGRDFTAAISRHSPGGAPRQRLAV 444 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPT 295 E D + + + + + + + A++ + Sbjct: 445 TELD-PAVAAVAAELAPGEVSRLFPLHNHYALLRLSGRHPGRLQPLAAVREEIRQTLQEQ 503 Query: 296 KIEKHEAEYVKKLRSNAIIHY 316 K ++ AE + +LR +A I Sbjct: 504 KEQEVRAELINRLRQHAAIEI 524 >gi|32490767|ref|NP_871021.1| hypothetical protein WGLp018 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25165973|dbj|BAC24164.1| surA [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 452 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 99/304 (32%), Gaps = 7/304 (2%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-KINGELE 73 +L I FC+ V+ +I + +N +VI D+ + I+ + E Sbjct: 34 ILLFKIFFISFCLFFNVNKSYSKEIDKIISIVNKKVILKSDVERIISDKNFNFENYFNSE 93 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 +++ L++ L E+ K+ + + + + + + K+ I D Sbjct: 94 SESLKNLVLNKLIIDEVIKNKLNEYETFFSSDLLFNVNQNIFLEKYINLNKKKKEITDKS 153 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVLFSIPDNK 191 + ++ ++ K E EI +KN ++ + +L + Sbjct: 154 ILKLEPNNFLYWNIQYEKLKKKIYISEKEINYLSTILFLKNNNIKININHYILENPKIFS 213 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 +N ++ + + + + K+ V + L F+ L Sbjct: 214 KKNIIEYKQIVNNLFKLLKNDKLSEKLIFKYLKNNKIVLGNFIGWNNLIKLPKYFRIFLF 273 Query: 252 --KSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + + K + I + + ++ + + E + Y+K+ Sbjct: 274 DLQKRKKIFGLFFLNKNLHLFQIKNIKYDKKIETEIKIKHILLIPSENRDENNTYFYLKQ 333 Query: 308 LRSN 311 +++ Sbjct: 334 IKNQ 337 Score = 42.7 bits (98), Expect = 0.078, Method: Composition-based stats. Identities = 21/190 (11%), Positives = 54/190 (28%), Gaps = 3/190 (1%) Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 +Y I K F L + N + + K + + + + I Sbjct: 258 WNNLIKLPKYFRIFLFDLQKRKKIFGLFFLNKNLHLFQIKNIKYDKKIETEIKIKHILLI 317 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQ- 245 P + + + N +K++ + G+ Y + Sbjct: 318 PSENRDENNTYFYLKQIKNQISSKEISFSNAAKKYSEDLYSALQGGEIDYDYKKIFDNFT 377 Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEY 304 + K + T P + +G + + + + + K K+ + + Sbjct: 378 LNKINKIKKGEITGPIRSLQGWHLVKLMNIKIVDNTYKIYKENAYKILFEKKLSEVIYNW 437 Query: 305 VKKLRSNAII 314 ++ +N+ I Sbjct: 438 LENEYNNSYI 447 >gi|213963094|ref|ZP_03391352.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga sputigena Capno] gi|213954178|gb|EEB65502.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga sputigena Capno] Length = 705 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 29/263 (11%), Positives = 66/263 (25%), Gaps = 19/263 (7%) Query: 46 INGEVIT--DGDISKRIALLKLQKINGELEKI----------AVQELIVETLKKQEIEKS 93 I+ + IT DG+I I + Q I A + + ++ Sbjct: 206 IDDKNITVTDGEIQDYIKKHEKQFKQEAYRNIQYIVAAEKPSAKDMEAEKQSLLKLLQPE 265 Query: 94 GITFDSNTVNYFFVQHAR--NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 + N A+ N + S+ + + +++ V Sbjct: 266 VVYNSKTNSNDTLPGFAKTKNIKEFVDRNSNVPYDSTFVNKDNIRSAYADTLYALPVGKV 325 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 F + +++ K V+ I ++ AEE + Sbjct: 326 FGPYEEDGNIKLSRMVAKEPAGAVKASHILIAYQGSQAATPNTTRTKEEAKAKAEELLAK 385 Query: 212 LPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG 266 + A + S G + + + F+ + T G Sbjct: 386 AKTAGTDFAELARENSEEPGAAYSGGDLGFFGKGAMVKPFEEFAFANPVGNIGLVETDFG 445 Query: 267 VEYIAICDKRDLGGEIALKAYLS 289 + + K + + + Sbjct: 446 FHVVKVTGKAEAVNIATISRAVE 468 Score = 39.3 bits (89), Expect = 0.87, Method: Composition-based stats. Identities = 12/119 (10%), Positives = 29/119 (24%), Gaps = 1/119 (0%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + I + L + + + + + E Q Sbjct: 581 EKKAAILKEKAKGNSLQAIASANKTEVKSATGLVMKNPTIIGEGREPKVVGAAFGLKQGQ 640 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P + V I + + + + E+ +K L ++A I Sbjct: 641 ISKPIDGENAVYVIQLISETIAPAITDYRTQA-ETVENLRTERAAQNILKSLENSATIK 698 >gi|195400745|ref|XP_002058976.1| GJ15247 [Drosophila virilis] gi|194141628|gb|EDW58045.1| GJ15247 [Drosophila virilis] Length = 165 Score = 53.5 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 6/91 (6%), Positives = 17/91 (18%), Gaps = 1/91 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + + ++ G Sbjct: 71 RPSSWREENITRTKEEAQMLLEIYRNKIVNSEATFEELARSYSDCSSAKRGGDLGKFGRG 130 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + F+ ++ T G+ I Sbjct: 131 QMQAPFEKAAFALKVGQLSDIVDTDSGLHII 161 >gi|194741062|ref|XP_001953008.1| GF17558 [Drosophila ananassae] gi|194908758|ref|XP_001981834.1| GG11384 [Drosophila erecta] gi|195504429|ref|XP_002099075.1| GE23581 [Drosophila yakuba] gi|190626067|gb|EDV41591.1| GF17558 [Drosophila ananassae] gi|190656472|gb|EDV53704.1| GG11384 [Drosophila erecta] gi|194185176|gb|EDW98787.1| GE23581 [Drosophila yakuba] Length = 130 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 26/87 (29%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q +I +A E K ++ G + + + FQ+ + Sbjct: 45 EKQGKITEAMEKLKAGQKFPEVAAAYSED-KARQGGDLGWQIRGAMVGPFQDAAFALPIS 103 Query: 257 TT-------NPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 104 TVNNPVYTDPPIKTKFGYHIIMVEGKK 130 >gi|83755097|gb|ABC46409.1| prolyl cis/trans isomerase [Trypanosoma cruzi] Length = 117 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 7/104 (6%), Positives = 26/104 (25%), Gaps = 1/104 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + + + + + A+ + + + Sbjct: 11 HLLIKFDGSRNCVSHRTGKSTADVTYDAALAELKQWAKRIADGEITFEDAARQRSDCGSY 70 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 S G + + F++ + + + T+ G+ I Sbjct: 71 NSGGDLGFFGPGVMMKPFEDAARSLNVEEVSGVVRTESGLHIIK 114 >gi|290997217|ref|XP_002681178.1| rotamase domain-containing protein [Naegleria gruberi] gi|284094801|gb|EFC48434.1| rotamase domain-containing protein [Naegleria gruberi] Length = 172 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 16/155 (10%), Positives = 36/155 (23%), Gaps = 1/155 (0%) Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 E S I + + + N+ N + E + Sbjct: 14 KESSSRPGVFYYINKFTNETQWEKPTKSAKPLVNNNNTNNNNDDGEQVKVSHLLIKHNQS 73 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 +I +K ++ +D + K + G + Sbjct: 74 RNPSSWKEKNITRSKKDATEILEGLREDIFNAEDMAEKFQELASVHSDCSSAKRGGDLGF 133 Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + F++ + ++ T GV I Sbjct: 134 FGRGQMQKPFEDASFRLKIGELSDIVSTDSGVHII 168 >gi|268319932|ref|YP_003293588.1| peptidylprolyl isomerase [Lactobacillus johnsonii FI9785] gi|262398307|emb|CAX67321.1| peptidylprolyl isomerase [Lactobacillus johnsonii FI9785] Length = 298 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 75/301 (24%), Gaps = 39/301 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 + I + + T G IT+ ++ + + + + Sbjct: 8 AATVLAFAGIALSATACSGGKAVVTYKGGKITESQYYDKMK-------ESQAGQSTLASM 60 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 IV + + K + + F S L++ G+ + FK L Sbjct: 61 IVSDALESQYGKDVTQKQVDKEYN------KYKKQYGSQFDSVLEQNGMTASTFKDNLKT 114 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + + K + + E ++ +L + Sbjct: 115 NLLTEAAL--KHIKKITPAQEKKAWKSY------QPEVTVQHIL-----------VSKKS 155 Query: 201 RIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESD---LHPQFQNLLKKSQNN 256 +D + +K+++ GK +D K Sbjct: 156 TAEDVIKQLQDGGDFKKLAKKYSTDTATKNDAGKLPAFDSTDSTLDSSFKTAAFKLKTGE 215 Query: 257 TTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH--EAEYVKKLRSNAI 313 T P TQ G I + G K + Q + E + + A Sbjct: 216 ITTTPVKTQYGYHVIKMIKHPAKGTLKEHKKQIDNQIYQSMSEDQNVMRSVIATVLKRAD 275 Query: 314 I 314 + Sbjct: 276 V 276 >gi|257125090|ref|YP_003163204.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptotrichia buccalis C-1013-b] gi|257049029|gb|ACV38213.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptotrichia buccalis C-1013-b] Length = 608 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 73/261 (27%), Gaps = 12/261 (4%) Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 ++ + Q + AV E I + ++ + VN +N + Sbjct: 254 KVKAVVAQNGEYKYTNEAVNEQI-----INSVSQTQQGYSDKLVNELKTTLKKNLDKFVK 308 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 D ++ + K + + Sbjct: 309 ISEKAKAAGIKADPDLIGVDQLRDYSQKYYNYLIDSYKPDDATLQARFNAKRDSYNTQNS 368 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 + V+ + +K+ + ++ + K ++F+ + G Sbjct: 369 IGGYVIGEEYQAGESDFEGAKKQADEIMKTTTK-DNFAAKAKEFSKDPESAKNGGSLGET 427 Query: 238 -LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TP 294 S L P+F N +K + P TQ G I I K +A +++ Sbjct: 428 ADLSQLVPEFANAVKNGKAGDIVGPIKTQFGYHIIYIQSKDPKNDNVAKVSHILITPTIS 487 Query: 295 TKIEKHEAEYVKKLRSNAIIH 315 ++ + V+ L+ A I Sbjct: 488 EASKQKVIKKVQNLK--AEIE 506 Score = 38.1 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 29/241 (12%), Positives = 72/241 (29%), Gaps = 27/241 (11%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKRIALLKLQKIN--- 69 ++ + + ++ + + + + + T+NG I D + LK + Sbjct: 17 MMGIFGIGMLISGILFLKNNVFGALNHREVIATVNGIKIYRDDFERESYSLKNELNEITQ 76 Query: 70 ---------------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + + +Q +I + + + GI + VN F Sbjct: 77 QKIQQLAQVGTNSGNIKSVPDDLVNEYVLQLIINKEILLSSAKNLGIKVSGSDVNKEFEN 136 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF-MLKYGNLEMEIPANK 167 + + + L ++F +L G + FKQ + Q I + + F K E++ + Sbjct: 137 YRKQSKLGKKEFGEYLRSVGYNVSSFKQTIKDQKIIEKMREKIFSNDKITEEEIKKAYER 196 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 K + + + + ++ E +K+ Sbjct: 197 NKYTQSFANQDFDDVKDQIKETMTQDKNIMILNSYLAKAKEKTKIVFKDKNFENMYTKVK 256 Query: 228 D 228 Sbjct: 257 A 257 >gi|227524701|ref|ZP_03954750.1| peptidylprolyl isomerase [Lactobacillus hilgardii ATCC 8290] gi|227088185|gb|EEI23497.1| peptidylprolyl isomerase [Lactobacillus hilgardii ATCC 8290] Length = 293 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 35/280 (12%), Positives = 78/280 (27%), Gaps = 37/280 (13%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 +I ++S+ A S+ T NG IT+ K Q++I+ Sbjct: 5 LIVLAGVLMSFTLAACGSKSVATTNGGKITES-------AYYSSLKGTSSGKQVFQQMIL 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + +++ K + VN F ++ + G S + L Sbjct: 58 NKVLEKQYGKK---VKDSAVNKDFNKYKKQYGSSFNAVL-------QQNGMTASQLKDSI 107 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 +++ + ++ A + + +L S ++ Sbjct: 108 RSNLLLQQAVRDNTKFTDAQLKA----QFKSYQPKVTVNQILVSKKSTAETVIKQLKA-- 161 Query: 203 KDAEESRLRLPKDCNKLEKFASK-IHDVSIGKA---QYLLESDLHPQFQNLLKKSQNNTT 258 + +K+++ G+ S + K T Sbjct: 162 ---------GKSFSSLAKKYSTDTATKNKGGRISAFDNTNTSLDSNFKKAAFKLKNGEYT 212 Query: 259 N-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 P TQ G + I + + G ++ L Q ++ Sbjct: 213 KTPVKTQYGYQVIQMVNHPAKGTYKDHESELKTQLVDKRL 252 >gi|330503610|ref|YP_004380479.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas mendocina NK-01] gi|328917896|gb|AEB58727.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas mendocina NK-01] Length = 92 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 8/77 (10%), Positives = 18/77 (23%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 + ++ K ++ G + + ++ K Sbjct: 12 KTEAEAAALKKRIAAGEAFDVLARKHSTCPSGKKGGDLGEVRPGQMVRAVDQVIFKKPLR 71 Query: 256 NTTNPYVTQKGVEYIAI 272 P TQ G I + Sbjct: 72 EVHGPVKTQFGYHLIQV 88 >gi|187918726|ref|YP_001887757.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia phytofirmans PsJN] gi|187717164|gb|ACD18387.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia phytofirmans PsJN] Length = 250 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 32/270 (11%), Positives = 71/270 (26%), Gaps = 26/270 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 I+ EV+ D+++ I LLKL + LI + ++ + + Sbjct: 4 IVRIDDEVV---DVAEFIRLLKLTGQ--------FESLIEQIVRDKLTVHAAKKQGITVT 52 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 Q A + Q + + I + + + + E Sbjct: 53 ADEIQQRADQFRRVRGLHRATDMNQYLDALNVSLDEFEAFITDGLYQEKMLDEI-GNEAA 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + VL S K + + + Sbjct: 112 IKDYFALNSPKFDAIEVSHIVLDSEG-----------KAKEMISYLHDDPDSFADMAREH 160 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKG--VEYIAICDKRDLG 279 + + G +L L P + + + + P+ + E A+ K Sbjct: 161 SIADTREAGGVIGKVLRGSLKPDIEAKIFNAAVGDLLGPFPSADRSCFEIFAVTAKYPAT 220 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + + + + E+V + R Sbjct: 221 LDADVASEVRRLLREGWLISRAQEHVIEAR 250 >gi|294656749|ref|XP_459062.2| DEHA2D13464p [Debaryomyces hansenii CBS767] gi|199431711|emb|CAG87230.2| DEHA2D13464p [Debaryomyces hansenii] Length = 177 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 7/165 (4%), Positives = 30/165 (18%), Gaps = 2/165 (1%) Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 A + + + K + + Sbjct: 11 NWAIRVSRTHNKEYYLNQATKESSWEPPFGTDNDKLQKYIAKYKANGNKPVIPEDGKVRA 70 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + + + + + ++ + + Sbjct: 71 SHILVKSNQSRRPK-SWKYPDGITRTRDEAILLLKSYQDKILGGEISLQDLASTESDCSS 129 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + + + P F+ + ++ + G+ I Sbjct: 130 HAQGGDLGFFGKGQMQPSFEEAAFGLNVGEISDIIESDSGIHLIQ 174 >gi|118387307|ref|XP_001026765.1| PPIC-type PPIASE domain containing protein [Tetrahymena thermophila] gi|89308532|gb|EAS06520.1| PPIC-type PPIASE domain containing protein [Tetrahymena thermophila SB210] Length = 118 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 29/114 (25%), Gaps = 1/114 (0%) Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 I A K+ R L R + + + V + +S Sbjct: 1 MNSQTIRAAHILQKHRGSRNPLDRVRNVQVTRTLDEAKKNVAAFREQIMKSADPQKTFME 60 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 +K++ + G + F+ +N + GV I Sbjct: 61 IAQKYSECTSARNGGDLGEFGPGQMQESFEQAAYALKVGEISNLVESDSGVHII 114 >gi|46446030|ref|YP_007395.1| hypothetical protein pc0396 [Candidatus Protochlamydia amoebophila UWE25] gi|46399671|emb|CAF23120.1| hypothetical protein pc0396 [Candidatus Protochlamydia amoebophila UWE25] Length = 375 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 103/349 (29%), Gaps = 54/349 (15%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSS----------------RIRTTINGEVITDGD 55 F+ + T F+ + + + ++ RI ING+ I+ D Sbjct: 16 FLVMKKTIFIASLSFFLTFYALEAIKSDDFLSSSRTEESKIFINNRILARINGKPISAYD 75 Query: 56 ISKRIALLKLQKINGELE-------------KIAVQELIVETLKKQEIEKSGITFDSNTV 102 + K++ + ++ L K A+++LI + L + ++S + S V Sbjct: 76 LVKKMDVTFYKQFPQYLSSTEARYQYYQFSWKYALEDLINKELILADAQESKVEVTSGDV 135 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 +++ D ++ L V + + + Sbjct: 136 RQEMELMFGPNIIASLDKIGLSFEEASKIVQGDILLKRMIGAR--VNGKAIRQVTPSRVR 193 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 +R + + +I D L+ + + + + KL++ Sbjct: 194 KSYEDFIKDPANIRLTIWNYKVLTIKDRNLKKSEEIAQAAYQLLRKGFSIEEVPAKLKE- 252 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK---------------GV 267 +G+ + S + + L KS NP T Sbjct: 253 -----GKLLGRKGKVTVSKVIHNNEKELSKSYQQILNPLDTGMYSLPFENKSRVEHTTVY 307 Query: 268 EYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + +K ++ L + ++ Y+KKLR + + Sbjct: 308 RILFVQEKIPGGYPSFKEMEPVLKERLLNQVADEETDLYLKKLREHFYV 356 >gi|91779615|ref|YP_554823.1| putative peptidyl-prolyl isomerase [Burkholderia xenovorans LB400] gi|91692275|gb|ABE35473.1| putative peptidyl-prolyl isomerase [Burkholderia xenovorans LB400] Length = 250 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 33/270 (12%), Positives = 71/270 (26%), Gaps = 26/270 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 I+ EV+ D+ + I LLKL + LI + ++ + + Sbjct: 4 IVRIDDEVV---DVGEFIRLLKLTGQ--------FESLIEQIVRDKLTVHAAKKQGITVS 52 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 Q A + Q + + I + + + + E Sbjct: 53 ADEIQQRADQFRRVRGLHRATDMNQYLDALNVSLDEFEAFITDGLYQEKMLDEI-GNEAA 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + VL S K + + + Sbjct: 112 IKDYFALNSPKFDAIEVSHIVLDSEG-----------KAKEMISYLHDDPDSFADMAREH 160 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKG--VEYIAICDKRDLG 279 + + G +L L P + + + + P+ + E A+ K Sbjct: 161 SIADTREAGGVIGKVLRGSLKPDIEAKIFNAAVGDLLGPFPSADRSCFEIFAVTAKYPAT 220 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + A + + + E+V + R Sbjct: 221 LDADVAAEVRRLLRESWLIARAQEHVIEAR 250 >gi|145255175|ref|XP_001398885.1| peptidyl-prolyl cis-trans isomerase pin4 [Aspergillus niger CBS 513.88] gi|134084475|emb|CAK43229.1| unnamed protein product [Aspergillus niger] Length = 124 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 25/85 (29%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K +F+ G + L F+ + + Sbjct: 41 EKFSKKEEALEKLRNGAKFDEVAREFSED-KARQGGSLGWKTRGSLDATFEKAAYDLEPS 99 Query: 257 TTN-P----YVTQKGVEYIAICDKR 276 TT P T G I + ++ Sbjct: 100 TTGNPKYVDVKTGFGYHIIMVEGRK 124 >gi|81428241|ref|YP_395241.1| peptidylprolyl isomerase [Lactobacillus sakei subsp. sakei 23K] gi|123564491|sp|Q38XZ9|PRSA_LACSS RecName: Full=Foldase protein prsA; Flags: Precursor gi|78609883|emb|CAI54930.1| Protein maturation protease precursor (peptidylprolyl isomerase) [Lactobacillus sakei subsp. sakei 23K] Length = 303 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 79/307 (25%), Gaps = 39/307 (12%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 ++ + + ++ + S T+ G +T + K I K Sbjct: 1 MMKKWLLAAASLLMVV---TLAGCGSNTIATLKGGKVTQDEFYKEIKETSA-------GK 50 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 VQ++I++ +++ +T + + + S Sbjct: 51 QQVQQMILQKALQEQYGSKSLTKKIDKTY----------NTYKKQYGSSFTSVLAQSGLT 100 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 Q + ++ + + + L Sbjct: 101 TSSFKNQITTQMLANAALKANKKVTNADLKKQWKTYEPK------------VEVQHILVE 148 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD--LHPQFQNLLK 251 + + + + +K+++ GK +D L P F+ Sbjct: 149 KKDTAETVISELKKDNSTKNFTALAKKYSTDTGTKKDGGKLPVFDSTDTSLDPTFKTAAF 208 Query: 252 KSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKK 307 K + N TT P T G I + G K L+ Q A+ K Sbjct: 209 KLKTNEYTTTPVKTSYGYHVIRMIKNPGKGKMADHKKTLTDQVYAKWANDQTVMAKVYTK 268 Query: 308 LRSNAII 314 + A + Sbjct: 269 VLKKADV 275 >gi|323528886|ref|YP_004231038.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1001] gi|323385888|gb|ADX57978.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. CCGE1001] Length = 250 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 30/270 (11%), Positives = 71/270 (26%), Gaps = 26/270 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 I+ EV+ D+ + I LLKL + LI + ++ + + Sbjct: 4 IVRIDDEVV---DVGEFIRLLKLTGQ--------FESLIEQIVRDKLTVHAAKKQGIVVT 52 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + A + Q + + I + + + + + Sbjct: 53 ADEIQERADQFRRVRGLHRATDMNQYLDVLNVSLDEFEAFITDGLYQEKMLDEV-GNDAA 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + VL S K + + + Sbjct: 112 VRDYFALNSPKFDAIEVSHIVLDSEG-----------KAKEMISYLHDDPDSFADMAREH 160 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKG--VEYIAICDKRDLG 279 + + G +L L P + + + + P+ + E A+ K Sbjct: 161 SIADTREAGGVIGKVLRGSLKPDIEAKIFNAAVGDLLGPFPSADRSCFEIFAVTAKYPAT 220 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + A + + + E+V + R Sbjct: 221 LDADVAAEVRRLLRESWLIARAQEHVIEAR 250 >gi|325088478|gb|EGC41788.1| peptidyl-prolyl cis-trans isomerase [Ajellomyces capsulatus H88] Length = 181 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 11/168 (6%), Positives = 34/168 (20%), Gaps = 1/168 (0%) Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + ++ + + L + D G+ + Sbjct: 11 EVRHSNSKNLPYYFNPATKESRWEPPTGTDTEKLKVYMAEHHSGPADRYTSGGSGGGSVE 70 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + + R + + + ++ R + + Sbjct: 71 GKIRASHLLIKHRESRRPSSWRESEITRSKEEALEILRGHERRIRAGEATLGDIAMSESD 130 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ +F+ + T GV I Sbjct: 131 CSSARKKGDLGFFGRGEMQTEFEEAAFALQPGQVSGIVETASGVHLIE 178 >gi|330721963|gb|EGG99901.1| Peptidyl-prolyl cis-trans isomerase ppiD [gamma proteobacterium IMCC2047] Length = 154 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 19/152 (12%), Positives = 49/152 (32%), Gaps = 13/152 (8%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + I + +++ F + + + + S +NG+ I++ ++ + Sbjct: 3 IQSIKDNSQGMIAKIIVGLIVLTFALFGVDAIVGNSGGSSKAAVVNGDEISEFELLRAAD 62 Query: 62 LLKLQK-------------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 K + + + A++ELI L Q ++ I + V+ +Q Sbjct: 63 FFKRRMLQEMGANADPDLIDDQLVRARALEELIQRQLLLQAADEQAIFVANGRVDQAILQ 122 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + D + + Y A Sbjct: 123 NESFQTNGVFDRNIYEYTLRNLQMTPVDYKAH 154 >gi|240282343|gb|EER45846.1| peptidyl-prolyl cis-trans isomerase ssp-1 [Ajellomyces capsulatus H143] Length = 196 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 11/168 (6%), Positives = 34/168 (20%), Gaps = 1/168 (0%) Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + ++ + + L + D G+ + Sbjct: 26 EVRHSNSKNLPYYFNPATKESRWEPPTGTDTEKLKVYMAEHHSGPADRYTSGGSGGGSVE 85 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + + R + + + ++ R + + Sbjct: 86 GKIRASHLLIKHRESRRPSSWRESEITRSKEEALEILRGHERRIRAGEATLGDIAMSESD 145 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ +F+ + T GV I Sbjct: 146 CSSARKKGDLGFFGRGEMQTEFEEAAFALQPGQVSGIVETASGVHLIE 193 >gi|303239800|ref|ZP_07326324.1| conserved hypothetical protein [Acetivibrio cellulolyticus CD2] gi|302592737|gb|EFL62461.1| conserved hypothetical protein [Acetivibrio cellulolyticus CD2] Length = 355 Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 35/327 (10%), Positives = 86/327 (26%), Gaps = 42/327 (12%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-------- 71 F I+ ++ + + + S+ TI GE IT + + + K + Sbjct: 14 FASILVLLLAVAGWLYYVNSTNYVATIKGEKITTDEFNFFLGSTKTEMETNANVDKTSET 73 Query: 72 ------------------LEKIAVQ-------ELIVETLKKQEIEKSGITFDSNTVNYFF 106 ++ A+ + I K ++E+ + +T++ Sbjct: 74 ALNEFWNTKVEGVPARDYAKQQALDSAKEFKIQYIKAKEKGLKLEEGDLKDVKSTLDNIK 133 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + N G F IG + ++ L + V+ + + Sbjct: 134 SGMSSNYGGDKLGEEEFKKTYNIGYDRYENILKDLMLVYKYVEGELPTFSVSETEMKDYY 193 Query: 167 KQKMKNITVREYLIRTV----LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 K+ + L + + Q + + + D E Sbjct: 194 KKSASAVDTVSVRRIMFATVDLQTGKEFTEQEKKDKKAQADDVLEKIKAGGDAEKLAVDL 253 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT--TNPYVTQKGVEYIAICDKRDLGG 280 + + + ++ T+ TQ G + + D+ Sbjct: 254 SDDTTVKDNKGLFEVTSNSNTNIPGFQEWALEHKIGDTDILTTQYGYFVVKVEDR---TT 310 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKK 307 +K + K + + K+ Sbjct: 311 YDEVKDKVKEAVETQKYLERLENWKKE 337 >gi|241948727|ref|XP_002417086.1| peptidyl prolyl cis/trans isomerase, putative [Candida dubliniensis CD36] gi|223640424|emb|CAX44676.1| peptidyl prolyl cis/trans isomerase, putative [Candida dubliniensis CD36] Length = 177 Score = 53.1 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 19/77 (24%), Gaps = 1/77 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254 +Q K E K + G + + + P F+ Sbjct: 98 ESIQILKKHLERILSGEVKLSELATTESDCSSHDRGGDLGFFSKGQMQPPFEEAAFNLHV 157 Query: 255 NNTTNPYVTQKGVEYIA 271 +N T GV + Sbjct: 158 GEVSNIIETNSGVHILQ 174 >gi|147817758|emb|CAN66666.1| hypothetical protein VITISV_031726 [Vitis vinifera] Length = 143 Score = 53.1 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 10/103 (9%), Positives = 28/103 (27%), Gaps = 3/103 (2%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R +L + +Q + + + + G Sbjct: 43 TYVKARHILCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKQQNIQ--NVHSGKKGGDLG 100 Query: 236 YLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRD 277 + + FQ++ + T+ P+ + G I +++ Sbjct: 101 WFPRGKMAGPFQDVAFSTVIGATSAPFKSTHGYHIILCEGRKN 143 >gi|289672777|ref|ZP_06493667.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. syringae FF5] Length = 79 Score = 53.1 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 6/75 (8%), Positives = 20/75 (26%), Gaps = 1/75 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 + + + + +K +S G + + ++ K Sbjct: 1 AEEAEQLKLRIAKGEAFDVLAKKHSSCPSGKRGGDLGEVRPGQMVGAIDQVIFKKPLRVV 60 Query: 259 -NPYVTQKGVEYIAI 272 P ++ G + + Sbjct: 61 HGPIKSKFGYHLVQV 75 >gi|19074283|ref|NP_585789.1| PEPTIDYL PROLYL CIS TRANS ISOMERASE (NIMA-INTERACTING) [Encephalitozoon cuniculi GB-M1] gi|19068925|emb|CAD25393.1| PEPTIDYL PROLYL CIS TRANS ISOMERASE (NIMA-INTERACTING) [Encephalitozoon cuniculi GB-M1] Length = 150 Score = 53.1 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 13/139 (9%), Positives = 37/139 (26%), Gaps = 2/139 (1%) Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + I+ + F E ++ +I ++ R + D Sbjct: 10 HPEMWIKLKDKETGSPYFYNTETAERTEKRPNEGFRLYHILIKHEKSRKPVDMSIDEAFS 69 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 + + ++ + K + G ++ +++ +F+ Sbjct: 70 RIKAIHEDLRAKAGDKNFRELFKEAAIKHSQCSSAKRGGDLGFVCGNEMMKEFEKPAFSL 129 Query: 254 -QNNTTNPYVTQKGVEYIA 271 + + P T G I Sbjct: 130 GRGEMSGPVSTPSGFHIIY 148 >gi|315224705|ref|ZP_07866528.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga ochracea F0287] gi|314945333|gb|EFS97359.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga ochracea F0287] Length = 705 Score = 53.1 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 27/256 (10%), Positives = 63/256 (24%), Gaps = 17/256 (6%) Query: 50 VITDGDISKRIALLKLQKINGELEKIA------------VQELIVETLKKQEIEKSGITF 97 +TD +I I + Q I ++ LK + E + Sbjct: 212 KVTDSEIQDYIKKHEKQFKQEAYRNIQYIVVSEKPSQTDIETEKESLLKLLQPEVVFNSK 271 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + +N + S + + +++ V F Sbjct: 272 TNKNDTIAGFAKTKNIKDFVDRHSDVPYDSTFVNKDNLRSSYADTLFNLPVGKVFGPYQE 331 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + +++ K V+ I ++ AEE + Sbjct: 332 DGSLKLSRMIAKQPGGAVKASHILIAYAGSQAATPNTTRTKEEAKAKAEELLAQAKVAGA 391 Query: 218 KLEKFASKIHDVSI-----GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 + A + + G + + + F+ + T T G + + Sbjct: 392 DFAQLARENSEEPGAVYSAGDLGFFSKGAMVKPFEEFAFNNAVGTIGLVETDFGFHVVKV 451 Query: 273 CDKRDLGGEIALKAYL 288 DK + + + Sbjct: 452 TDKAEAVNIATISRKV 467 >gi|210622794|ref|ZP_03293348.1| hypothetical protein CLOHIR_01296 [Clostridium hiranonis DSM 13275] gi|210154050|gb|EEA85056.1| hypothetical protein CLOHIR_01296 [Clostridium hiranonis DSM 13275] Length = 144 Score = 53.1 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 44/126 (34%), Gaps = 5/126 (3%) Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNL 249 + + ++K ++ ++ +K++ G Y + F + + Sbjct: 22 DEKKEEIKKTAEEVQKRAASGEDFAALAKKYSDDKKTGEKGGDLGYFTKDAKDALFTREV 81 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 K + + + T G E + I D + EI + +++ ++V++L Sbjct: 82 FKLKKGDVSKLIATNNGYEIVKINDIK---SEIKELDKCKEEIKKKILDEKYIKHVEQLV 138 Query: 310 SNAIIH 315 A + Sbjct: 139 EKAEVK 144 >gi|83310913|ref|YP_421177.1| parvulin-like peptidyl-prolyl isomerase [Magnetospirillum magneticum AMB-1] gi|82945754|dbj|BAE50618.1| Parvulin-like peptidyl-prolyl isomerase [Magnetospirillum magneticum AMB-1] Length = 623 Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 15/190 (7%), Positives = 43/190 (22%), Gaps = 17/190 (8%) Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + F + +D E + ++ Sbjct: 213 LEAYYKDNVSRFMAPEFRALTVLLLRPSDVAGGIDIDEEMVRDAYRQRIEEFSTPERRAV 272 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 ++ + + + + I + ++DL Sbjct: 273 SQIVFDESSAAAKAT---------DLVTGGKDLATIAKAL-----NSEIIDLGVIEKNDL 318 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 + + K S T+ P T G + + + + AQ ++ Sbjct: 319 PEGLAEAVFKLSSGATSQPVKTALGWHVVKVSQIQPGR--TRSFDEVKAQLEQDMRKEKA 376 Query: 302 AEYVKKLRSN 311 + + +L + Sbjct: 377 TDGLSELANR 386 >gi|262370474|ref|ZP_06063800.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter johnsonii SH046] gi|262314816|gb|EEY95857.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter johnsonii SH046] Length = 621 Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 88/306 (28%), Gaps = 23/306 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + ++ L +V I Y S ++ ++NG+ I++ ++ A Sbjct: 1 MESFRKVIKGWLGKALLILFLTPLALVGIEGYFSSGSKDAVK-SVNGQDISEKELETLTA 59 Query: 62 LLKLQ-----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQ 108 K Q ++ A+ +LI TL Q+ EK GI+ + Sbjct: 60 SFKEQFLAYANGDETLLNQSFIKDKAMDQLIANTLLLQQAEKLGISLSDTQIEQMIAQQP 119 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + G +E S + + Q ++++ F+ +++I Sbjct: 120 SFQENGKFSETRYSSYLQSVGMSSDALVANLRQDHALKMMRSTFVDYALVSKLDIQQ-IA 178 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 ++ L N + ++ K ++ A Sbjct: 179 NLQTEQRTVQFANVNLDEYKKNVKVSAQEIENYYKQHPAMFKQVASVDVDYVLLAPANVP 238 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + + +++L + ++ ++N + D R + Sbjct: 239 AAASP---VTDAELQQAYTQFVEAQKDNVAPLVK-----HILITTDARTDAEAKKRAEEV 290 Query: 289 SAQNTP 294 A+ Sbjct: 291 VAKIKA 296 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 23/231 (9%), Positives = 59/231 (25%), Gaps = 4/231 (1%) Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 L+ + +Q N ++ +N +SA++ ++ + Sbjct: 168 LVSKLDIQQIANLQTEQRTVQFANVNLDEYKKNVKVSAQEIENYYKQHPAMFKQVASVDV 227 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + E++ + L++ +L + Sbjct: 228 DYVLLAPANVPAAASPVTDAELQQAYTQFVEAQKDNVAPLVKHILITTDARTDAEAKKRA 287 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT 258 + + ++ + + + G + F + + Sbjct: 288 EEVVAKIKAGTSFAAAAAQYSE--DTASKANGGALAVYNKGTFGDAFDQAVASLKSGQVS 345 Query: 259 NPYVTQKGVEYIAICD-KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 P T+ G I L KA L+A+ K ++ V L Sbjct: 346 APVKTEFGYHVIETDAPAVKLPSFENEKARLTAEVQKNKTANAFSDTVNSL 396 >gi|154274143|ref|XP_001537923.1| peptidyl-prolyl cis-trans isomerase ssp-1 [Ajellomyces capsulatus NAm1] gi|150415531|gb|EDN10884.1| peptidyl-prolyl cis-trans isomerase ssp-1 [Ajellomyces capsulatus NAm1] Length = 181 Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 11/168 (6%), Positives = 34/168 (20%), Gaps = 1/168 (0%) Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + ++ + + L + D G+ + Sbjct: 11 EVRHSNSKNLPYYFNPATKESRWEPPTGTDTEKLKVYMAEHHSGPADRYASGGSGGGSVE 70 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + + R + + + ++ R + + Sbjct: 71 GKIRASHLLIKHRESRRPSSWRESEITRSKEEALEILRGHERRIRAGEATLGDIAMSESD 130 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ +F+ + T GV I Sbjct: 131 CSSARKKGDLGFFGRGEMQTEFEGAAFALQPGQVSGIVETASGVHLIE 178 >gi|126138552|ref|XP_001385799.1| peptidylprolyl cis/trans isomerase [Scheffersomyces stipitis CBS 6054] gi|126093077|gb|ABN67770.1| peptidylprolyl cis/trans isomerase [Scheffersomyces stipitis CBS 6054] Length = 176 Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 12/123 (9%), Positives = 33/123 (26%), Gaps = 1/123 (0%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + + + R + PD + +++K + Sbjct: 51 EKYRANGHKPVIREDGKVRVSHLLIKHNQSRRPRSWKSPDGITTTRDEAIQKLKQLQAKI 110 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVE 268 L K E + + G + + + P F+ + ++ T G+ Sbjct: 111 LNGEKLSELAESESDDSSHSTGGDLGFFGKGQMQPAFEEAAFGLNVGEISDIVETDSGLH 170 Query: 269 YIA 271 + Sbjct: 171 LLE 173 >gi|255084659|ref|XP_002508904.1| predicted protein [Micromonas sp. RCC299] gi|226524181|gb|ACO70162.1| predicted protein [Micromonas sp. RCC299] Length = 116 Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 7/76 (9%), Positives = 18/76 (23%), Gaps = 1/76 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + + E+ + K + G + + F++ Sbjct: 37 AALDELEAYREQIESGAVTFADLAAKVSDCSSAKHGGDLGFFGPGKMQKAFEDGAFALQV 96 Query: 255 NNTTNPYVTQKGVEYI 270 + + GV I Sbjct: 97 GEMSGVIDSDSGVHII 112 >gi|312868729|ref|ZP_07728921.1| putative foldase protein PrsA [Lactobacillus oris PB013-T2-3] gi|311095715|gb|EFQ53967.1| putative foldase protein PrsA [Lactobacillus oris PB013-T2-3] Length = 318 Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 32/287 (11%), Positives = 81/287 (28%), Gaps = 26/287 (9%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + ++ + ++ A ++ T +G IT + + K Sbjct: 1 MKSKKLIAVIAGAALM-LPLAACGNKAVATTSGGKITQSEYYSSMKATSN-------GKQ 52 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 +Q++I++ + ++E K N + S + + Sbjct: 53 VLQQMILDKVLEKEYGKQVSDKQVN----------AQYNSYKSQYGSQFSSFLQQNGMTE 102 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + L Q +++ +I A +K + + +K Q Sbjct: 103 KSLKQQLRSNLLLEAAVRDYSHITNKQINAQWKKYQPKVQTAE-------ILVGSKNDAQ 155 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 + + +++ + +K ++K + + S + K Sbjct: 156 DIIDQLNNSSDKYKTFKKLAKSKSTDTSNKDNGGRVPAFDNTDNSLDSAYKEAAFKLKTG 215 Query: 256 NTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 T P T G + I + + G + A L Q + Sbjct: 216 EYTTTPVKTDDGYQVIYMIEHPAKGKKSQHIADLRTQIVQENMNNRT 262 >gi|294946367|ref|XP_002785041.1| peptidyl-prolyl cis-trans isomerase ESS1, putative [Perkinsus marinus ATCC 50983] gi|239898433|gb|EER16837.1| peptidyl-prolyl cis-trans isomerase ESS1, putative [Perkinsus marinus ATCC 50983] Length = 110 Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 8/85 (9%), Positives = 27/85 (31%), Gaps = 1/85 (1%) Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + + + +++ E+ + + + + G + ++ F Sbjct: 26 CHEISISHDEALKEIKDMIEKLKADRSIFSEMAKARSDCGSYKNGGDLGFFDRGEMQRPF 85 Query: 247 QNLLKK-SQNNTTNPYVTQKGVEYI 270 +++ + P T GV +I Sbjct: 86 EDVAFSLKIGELSGPVETDSGVSFI 110 >gi|325122070|gb|ADY81593.1| peptidyl-prolyl cis-trans isomerase precursor [Acinetobacter calcoaceticus PHEA-2] Length = 582 Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 82/305 (26%), Gaps = 23/305 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 T + ++ + L +V I Y + + + T+NG+ I+ D+ Sbjct: 1 MESFRTVIKGWLGKVLLILFLTPLALVGIEGYFNRGNKADVAKTVNGQEISKKDLETLTQ 60 Query: 62 LLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQ 108 K Q ++ A+ L+ L Q+ EK GI+ + Sbjct: 61 SYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDAQIEQMLAQQP 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + G ++ + + Q ++ + F ++++ Sbjct: 121 SLQENGQFSQKLYENYLRSIGMTSQGLIASLRQDHALKMLTSTFADYSLVSKVDL-MQIA 179 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 ++ +L L + + + + + + Sbjct: 180 NLQTEQRTLHLASIKLDAYKTGLTASNQEATDYYNKHQNEFKQQASVDVDYVVLSPSMMA 239 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 E++L + ++ + + + D RD L + Sbjct: 240 KPA----PATEAELQQAYAKFVETQKKDAKRTVK-----HILITTDARDDAAAQKLAKEV 290 Query: 289 SAQNT 293 A+ Sbjct: 291 YAKIQ 295 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 55/194 (28%), Gaps = 4/194 (2%) Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 D N FKQ ++ + + + E E+ T ++ Sbjct: 204 ASNQEATDYYNKHQNEFKQQASVDVDYVVLSPSMMAKPAPATEAELQQ-AYAKFVETQKK 262 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY- 236 RTV + ++ QK K+ +F+ + G Sbjct: 263 DAKRTVKHILITTDARDDAAAQKLAKEVYAKIQGGLSFAQAASQFSEDPSSKAKGGLVEA 322 Query: 237 LLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAIC-DKRDLGGEIALKAYLSAQNTP 294 F + +L + P TQ G I + A KA L+A+ Sbjct: 323 YAPGVFSDAFDKTVLSLKNGQVSQPVKTQYGYHIIEAETQANQIPSFEAEKARLTAEVEK 382 Query: 295 TKIEKHEAEYVKKL 308 K+ ++ V L Sbjct: 383 NKVATVYSDAVNSL 396 >gi|325105922|ref|YP_004275576.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pedobacter saltans DSM 12145] gi|324974770|gb|ADY53754.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pedobacter saltans DSM 12145] Length = 699 Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 14/134 (10%), Positives = 37/134 (27%), Gaps = 5/134 (3%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 + + + + + + ++F + S G Sbjct: 347 KARHILLNPATEGGMDKAKSKADSIKNLIQKGASFAELAKEFGTDGSKDSGGDLGTFARG 406 Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 + P+F++ + TQ GV I I + + + ++ E+ Sbjct: 407 SMVPKFEDAVFNGPVGQVFTLETQFGVHVIEIQKQIGSSKVVKVAVVDKQIAPSSQTEQA 466 Query: 301 EAEYVKKLRSNAII 314 + ++ A I Sbjct: 467 AYQ-----KAQAFI 475 >gi|195453617|ref|XP_002073865.1| GK12925 [Drosophila willistoni] gi|194169950|gb|EDW84851.1| GK12925 [Drosophila willistoni] Length = 129 Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 26/87 (29%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q +I +A E K ++ G + + + FQ+ + Sbjct: 44 EKQGKITEAMEKLKAGQKFPEVAAAYSED-KARQGGDLGWQIRGAMVGPFQDAAFALPIS 102 Query: 257 TT-------NPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 103 TVNNPVYTDPPIKTKFGYHIIMVEGKK 129 >gi|68491571|ref|XP_710415.1| hypothetical protein CaO19.12663 [Candida albicans SC5314] gi|68491594|ref|XP_710404.1| hypothetical protein CaO19.5196 [Candida albicans SC5314] gi|66361212|pdb|1YW5|A Chain A, Peptidyl-Prolyl Isomerase Ess1 From Candida Albicans gi|12655856|gb|AAK00626.1| peptidyl prolyl cis/trans isomerase [Candida albicans] gi|46431598|gb|EAK91142.1| hypothetical protein CaO19.5196 [Candida albicans SC5314] gi|46431610|gb|EAK91153.1| hypothetical protein CaO19.12663 [Candida albicans SC5314] gi|238879094|gb|EEQ42732.1| peptidyl-prolyl cis-trans isomerase 1 [Candida albicans WO-1] Length = 177 Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 15/155 (9%), Positives = 36/155 (23%), Gaps = 2/155 (1%) Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + Q ++ + + F + + + Sbjct: 20 HNKEYFLNQSTNESSWDPPYGTDKEVLNAYIAKFKNNGYKPLVNEDGQVRVSHLLIKNNQ 79 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDVSIGKAQYL 237 + + PD + + + +K E L K + G + Sbjct: 80 SRKPKSWKSPDGISRTRDESIQILKKHLERILSGEVKLSELANTESDCSSHDRGGDLGFF 139 Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIA 271 + + P F+ +N T GV + Sbjct: 140 SKGQMQPPFEEAAFNLHVGEVSNIIETNSGVHILQ 174 >gi|170100132|ref|XP_001881284.1| predicted protein [Laccaria bicolor S238N-H82] gi|164643963|gb|EDR08214.1| predicted protein [Laccaria bicolor S238N-H82] Length = 98 Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 8/86 (9%), Positives = 26/86 (30%), Gaps = 7/86 (8%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + +A + ++++ + G +++ + FQ++ + Sbjct: 14 EKHSKATEALQKIQEGQAFNKVAQEYSED-KAKAGGSLGWMVRGSMVGAFQDVAFALTPS 72 Query: 257 ------TTNPYVTQKGVEYIAICDKR 276 + T G I + +R Sbjct: 73 TVDKPLVSGLVKTNFGYHIIMVEGRR 98 >gi|70726122|ref|YP_253036.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus haemolyticus JCSC1435] gi|68446846|dbj|BAE04430.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus haemolyticus JCSC1435] Length = 324 Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 31/265 (11%), Positives = 70/265 (26%), Gaps = 9/265 (3%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 L K K + ++ E + + ++ + + Sbjct: 27 DSESNTLISSKAGDVKVKDVMNKIGDEQIASTSFSIALNKILADKYKDKVDTKDIDDEIK 86 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 E Q + + + + ++++ + K Sbjct: 87 KEQKQYGGKDQFESMLKQQGMSLDDYKEQKKL-AAYQKQLLADKVKVSDKELKENTKKAS 145 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQ 235 LI+ S L ++ +K K +E K +K + G Sbjct: 146 HILIKVKSSSSDKEGLSDKKAKEKAEKIQKEVEKNPDKFGEIAKKESMDSSSAKKDGSLG 205 Query: 236 YLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 Y+++ + +F+ K + ++ T G I K+ L A+ Sbjct: 206 YVVKGQMVSKFEKALFKLKEGQVSDVVKTDYGYHVIKAD---KESDFDKQKSKLKAKLIE 262 Query: 295 TKIE---KHEAEYVKKLRSNAIIHY 316 K++ K K L + Y Sbjct: 263 QKVQKDPKILTNAYKDLLKEYDVDY 287 >gi|284055341|pdb|2KGJ|A Chain A, Solution Structure Of Parvulin Domain Of Ppid From E.Coli Length = 102 Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 7/73 (9%), Positives = 26/73 (35%), Gaps = 1/73 (1%) Query: 207 ESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 + + ++ ++ I + G +L ++ + + +N K + + + Sbjct: 24 DELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSV 83 Query: 266 GVEYIAICDKRDL 278 G + + D + Sbjct: 84 GFLIVRLDDIQAA 96 >gi|3004661|gb|AAC28408.1| dodo [Drosophila melanogaster] Length = 166 Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 9/155 (5%), Positives = 31/155 (20%), Gaps = 1/155 (0%) Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + + + + Y + P + + Sbjct: 8 PDGWEKRTSRSTGMSYYLNMYTKESQWDQPTEPAKKTGGGSAGGGDAPDEVHCLHLLVKH 67 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + R + + + + + ++ G Sbjct: 68 KGSRRPSSWREANITRTKEEAQLLLEVYRNKIVQQEATFDELARSYSDCSSAKRGGDLGK 127 Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + F++ K + N + + G+ I Sbjct: 128 FGRGQMQAAFEDAAFKLNVNQLSGIVDSDSGLHII 162 >gi|260550156|ref|ZP_05824370.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. RUH2624] gi|260406911|gb|EEX00390.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. RUH2624] Length = 621 Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 34/319 (10%), Positives = 84/319 (26%), Gaps = 23/319 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 T + ++ + L +V I Y + + + T+NG+ I+ D+ Sbjct: 1 MESFRTVIKGWLGKVLLILFLTPLALVGINGYFNRGNKADVAKTVNGQDISKKDLETLTQ 60 Query: 62 LLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQ 108 K Q ++ A+ L+ L Q+ EK GI+ + Sbjct: 61 RYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDAQIEQMLAQQP 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + G ++ + + Q ++ + F ++++ Sbjct: 121 SLQENGQFSQKLYENYLRSIGMTSQALIASLRQDHALKMLTSTFSDYALVSKVDV-MQIA 179 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 ++ +L L + + + + + + Sbjct: 180 NLQTEQRTLHLASIKLDTYKTGLTASNQEATDYYNKHQNEFKQPASVDVDYVVLSPSLMA 239 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 +++L + ++ Q N + D RD L + Sbjct: 240 KPA----PATDAELKQAYAKFVETQQKNAKRVVK-----HILITTDARDDAAAQKLANEV 290 Query: 289 SAQNTPTKIEKHEAEYVKK 307 A+ A + Sbjct: 291 YAKIQGGLSFAQAAAQFSE 309 Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 39/144 (27%), Gaps = 3/144 (2%) Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI- 226 T ++ R V + ++ QK + +F+ Sbjct: 253 YAKFVETQQKNAKRVVKHILITTDARDDAAAQKLANEVYAKIQGGLSFAQAAAQFSEDPT 312 Query: 227 HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICD-KRDLGGEIAL 284 G + F + + + P TQ G I + A Sbjct: 313 SKTKGGLVEAYAPGVFSDAFDKTVSSLKNGQVSQPVKTQYGYHIIEAETPANQIPSFEAE 372 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKL 308 KA L+A+ K+ ++ V L Sbjct: 373 KARLTAEVEKNKVATVYSDTVNSL 396 >gi|163753204|ref|ZP_02160328.1| peptidyl-prolyl cis-trans isomerase [Kordia algicida OT-1] gi|161326936|gb|EDP98261.1| peptidyl-prolyl cis-trans isomerase [Kordia algicida OT-1] Length = 701 Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 12/116 (10%), Positives = 35/116 (30%), Gaps = 8/116 (6%) Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL-ESDLHPQFQNLLKK 252 + + + K + ++ + G + + L P F+ + + Sbjct: 364 KEEAKKTADSILTIVKRNKSKFADIAKEISDDTSKDKGGDLGWFTGATALTPTFKEFVFE 423 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++ + G I I D+++ + + T K + + + L Sbjct: 424 NETGDMGVVESPFGFHVIEIEDQKN-------EQKVVKLATINKQVEVTEQTLNDL 472 Score = 37.7 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 16/125 (12%), Positives = 39/125 (31%), Gaps = 4/125 (3%) Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250 + + + + K ++ L K E+ A+ + + Sbjct: 574 RNKKKAEMIKANNAGSKTLAELASAAGKAEQQATSLSMAAPIIPG---AGAEKKVVGAAF 630 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + T+ + GV I + DK + + + + K + V+ L+S Sbjct: 631 ALDKGATSGLIEGRTGVFMIQVVDKVEAPAKDTYLTEM-NTLRNQRATKATSSVVEALKS 689 Query: 311 NAIIH 315 ++ I Sbjct: 690 SSEIE 694 >gi|119480665|ref|XP_001260361.1| peptidyl-prolyl cis/trans isomerase [Neosartorya fischeri NRRL 181] gi|119408515|gb|EAW18464.1| peptidyl-prolyl cis/trans isomerase [Neosartorya fischeri NRRL 181] Length = 178 Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 10/165 (6%), Positives = 31/165 (18%), Gaps = 2/165 (1%) Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL-EMEIPANK 167 S F + + + + Sbjct: 13 WEVRHSNSKNLPYYFNPSTKESRWEPPTGTDTELLKVYMANYHSAPAVRPDGTGQGEGKI 72 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + + R + + + ++ + R + + Sbjct: 73 RCSHLLIKHRDSRRPSSWREAEITRSKEEAIEILRGHEQRIRSGGVSLGDIAVSESDCSS 132 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ +F++ + T GV I Sbjct: 133 ARKKGDLGFFGRGEMQKEFEDAAFALQPGQVSGIVETASGVHLIE 177 >gi|262376134|ref|ZP_06069364.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter lwoffii SH145] gi|262308735|gb|EEY89868.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter lwoffii SH145] Length = 621 Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 22/232 (9%), Positives = 61/232 (26%), Gaps = 6/232 (2%) Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 L+ +Q + + + + ++ ++ D +++ +K Sbjct: 168 LVSPVEMQQIADLQTEQRHIHISSINLDSYKKDVKVTDADIAAYYEKHKTLFKQPTSVDV 227 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + L + E++ + ++ +L + ++ + Sbjct: 228 DYVVLKPSDIQVQSLAVTDAELQEAYTAFVATQKQAVKPDVKHILITA---DSRSDAEAK 284 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNT 257 K + +++ G E F + Sbjct: 285 KLATEIAAKIKAGTTFAQAAAQYSEDPESKSKGGALAVYEEGVFGTAFDQTVSSLKSGQV 344 Query: 258 TNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + P T G I++ + + KA LS + K ++ V L Sbjct: 345 SAPVKTDYGYHIISVQTPDVAVPSFESQKARLSEEALAAKKSNAFSDTVNTL 396 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 35/325 (10%), Positives = 81/325 (24%), Gaps = 22/325 (6%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTT-INGEVITDGDISKRI 60 + ++ + L +V I Y S S +NG I+ ++ Sbjct: 1 MEAFRKVIKGWLGKVLLVLFLTPLALVGIEGYFSSGNSD--AAKSVNGTEISQKELESLT 58 Query: 61 ALLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 K Q +++ A+ L+ TL Q+ E+ GI+ + Q Sbjct: 59 KSFKEQYLSYANGDETLLNQSFIDQKAMDTLVARTLLLQQAEELGISLSDQQIEQMIAQQ 118 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + + + + + + K+ + + ++ P Sbjct: 119 PTFQQDGKFSNALYENYLKSIGMTNRA------LIESLRKDHALKMLSSTFLDYPLVSPV 172 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + + N + V+ D + + + Sbjct: 173 EMQQIADLQTEQRHIHISSINLDSYKKDVKVTDADIAAYYEKHKTLFKQPTSVDVDYVVL 232 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 Q + + Q + D R L ++ Sbjct: 233 KPSDIQVQSLAVTDAELQEAYTAFVATQKQAVK-PDVKHILITADSRSDAEAKKLATEIA 291 Query: 290 AQNTP-TKIEKHEAEYVKKLRSNAI 313 A+ T + A+Y + S + Sbjct: 292 AKIKAGTTFAQAAAQYSEDPESKSK 316 >gi|330808733|ref|YP_004353195.1| peptidylprolyl isomerase (peptidyl-prolyl cis-trans isomerase C) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376841|gb|AEA68191.1| peptidylprolyl isomerase (peptidyl-prolyl cis-trans isomerase C) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 91 Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 5/77 (6%), Positives = 22/77 (28%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + + ++ + +K+++ G + + ++ K Sbjct: 11 KTAEEAEQLKQRIAKGEAFDVLAKKYSTCPSGKRGGDLGEVRPGQMVGVIDAVIFKKPLR 70 Query: 257 TT-NPYVTQKGVEYIAI 272 P ++ G + + Sbjct: 71 VVHGPIKSKFGYHLVQV 87 >gi|302508515|ref|XP_003016218.1| hypothetical protein ARB_05616 [Arthroderma benhamiae CBS 112371] gi|291179787|gb|EFE35573.1| hypothetical protein ARB_05616 [Arthroderma benhamiae CBS 112371] Length = 150 Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K + +F+ G + + L F+ + + + Sbjct: 67 EKHSKKEEALEKLRAGAKFDDVAREFSED-KARQGGSLGWKVRGSLDAAFEKAAYELEPS 125 Query: 257 TTN-P----YVTQKGVEYIAICDKR 276 TT P T G I + ++ Sbjct: 126 TTGNPKYVEVKTGFGYHIIMVEGRK 150 >gi|224543042|ref|ZP_03683581.1| hypothetical protein CATMIT_02242 [Catenibacterium mitsuokai DSM 15897] gi|224524067|gb|EEF93172.1| hypothetical protein CATMIT_02242 [Catenibacterium mitsuokai DSM 15897] Length = 321 Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 21/268 (7%), Positives = 71/268 (26%), Gaps = 16/268 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + + ++ + + + + D+ + + Sbjct: 1 MKAKKIAALCLASVLLLSGCGGKTVDGKSVVASTSEGNVYADDVYDTL--ISTSSGKSAA 58 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + +LI + K + +++ + + S ++ Sbjct: 59 FQYVLDQLINKQYPITSDMKDNASDMLDSIKNSYKSKYGEDSYEKQFKSDLKSAGYTSES 118 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +K+ L + ++VK+ Y + + K T R + + S P N Sbjct: 119 EYKKKLIYSLQYAELVKHYVKTHYDTVFED------YYKVATPRMISMIKISVSDPSNPT 172 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL------HPQF 246 ++ K +++ + ++ G + + Sbjct: 173 DSEKEKLKEVQELLKDGKSFGDVAKDYSDDSTTKSAK--GSLGVVDTTSNLTNTYGSTIN 230 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICD 274 + ++ T++ G + Sbjct: 231 EAAFSLTEGQTSDVLTGNDGYYILKCTS 258 >gi|302338344|ref|YP_003803550.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta smaragdinae DSM 11293] gi|301635529|gb|ADK80956.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta smaragdinae DSM 11293] Length = 511 Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 34/339 (10%), Positives = 85/339 (25%), Gaps = 45/339 (13%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI----------TDGDISKRIAL 62 + +++ F P +S+ S + + NGE I ++KR Sbjct: 31 FSVFILVLIVVTFVGAPAISHFGSQRGSIVFGSWNGEPIEYRPDNYLSRQRDMVAKRYQA 90 Query: 63 LKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 + Q ++ A + ++ + +E +KSG+ V+ + Sbjct: 91 MFQQSQGQDNIDWQLFQVWNGAFELTVIHSAIMEEAQKSGLQVSDERVDRALTYYEGYWE 150 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 ++ + + Y I V + F + E + + Sbjct: 151 NGKFSPEAYRNTSSSEKFSVRNYYHESLIHQQWVSDVFSTHSSSAEKAFLLSLASPERNF 210 Query: 175 VREYLIRTVLFSIP----------------DNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + +++ + + ++ R Sbjct: 211 RFVNWDLNSYPAEKVAEYGRQTGDLFAEGSFSRISLKDDKKSAEAVLKQLREETSTFEEL 270 Query: 219 LEKFASKIHDVSIGKAQYLLESDL------HPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 ++ I+ G+ Y++ L + + + T G Sbjct: 271 ATAHSTDIYADKGGEMGYVMRYALQSDISNDKDLDEVFSLAPGEASGLVETPYGWAIYRS 330 Query: 273 CD-KRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 RD + + S + +Y L Sbjct: 331 NGPIRDADFTNDETIDKVRSYMLVNDRG--IVEDYFLDL 367 >gi|126662464|ref|ZP_01733463.1| peptidyl-prolyl cis-trans isomerase [Flavobacteria bacterium BAL38] gi|126625843|gb|EAZ96532.1| peptidyl-prolyl cis-trans isomerase [Flavobacteria bacterium BAL38] Length = 685 Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 28/250 (11%), Positives = 65/250 (26%), Gaps = 9/250 (3%) Query: 45 TINGEVI--TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 T+N + + +D +I + + + I + + K+ E D Sbjct: 205 TVNDDEVKVSDSEIIDFMKKSPKKYKSDNTSSIEFVLVENKPSKEDEQAMLSSIGDVKVK 264 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 V N G S + ++ V + N Sbjct: 265 FDSVV----NVGEFVNANSDIKFDSTYVTKKDLPLDYQEQLFNLPVGGVYGPYVFNGHQC 320 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL--PKDCNKLE 220 I K N + + I P + + + + ++ + Sbjct: 321 ISRMISKKANASAKASHILLAYKGAPQSSATRTKEEAQALANNLLAQAKANPENFAVLAM 380 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + + G+ + + PQF + + + + T G I + DK + Sbjct: 381 ANSDDPGSKNNGGEYDNITPGQMVPQFNDFVFNNVIGSIGVVETDYGFHVIKVMDKYNSV 440 Query: 280 GEIALKAYLS 289 + + Sbjct: 441 LMGTVAQKIQ 450 >gi|78222137|ref|YP_383884.1| hypothetical protein Gmet_0917 [Geobacter metallireducens GS-15] gi|78193392|gb|ABB31159.1| conserved hypothetical protein [Geobacter metallireducens GS-15] Length = 549 Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 38/122 (31%), Gaps = 2/122 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + K+ + +++L + + G + S + L Sbjct: 421 ELAKKKAEEAQAKLAKGDTAGLKLQETGSFAFDAKGNVPVIGTSPELMEAAFTLTDKAPA 480 Query: 257 TTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P + ++ + A K + + P K E+ +++K+LR+ A I Sbjct: 481 PQAPVKIGNRWVAFRLKERTELNAAAFPAEKEKIKQELLPKKQEEELQKWLKELRAKAKI 540 Query: 315 HY 316 Sbjct: 541 EI 542 Score = 40.8 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 20/245 (8%), Positives = 66/245 (26%), Gaps = 28/245 (11%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFC---IVPIVSYKSWAMSSRIRTTINGEVITDGDIS 57 M + + + +++ F + S ++ ++ + Sbjct: 22 MLGIMRKYKQSIVIKVVFGLIVLSFIGTIFLVWGKGDGGLTPSSYAVKVDRTKVSYEEFQ 81 Query: 58 KRIALLKLQ-------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + L+ + L+K A+ LI L ++ + G+ V Sbjct: 82 RTYYRLRDIYTQIYGPALTPEVEKQLNLKKQALDSLIDAALLRKAAKDMGVKVSEEEVQK 141 Query: 105 ---FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 +N + + + L + F+ + + ++ K + Sbjct: 142 AIAAIPAFQKNGAFDSAQYFAVLKANRLAPKEFEAGQKDELMVKKA-QDQIKAKVQVTDD 200 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 ++ R L + + +G ++ ++ + + + E+ Sbjct: 201 AARQLY--------KKRNDRLNLQFTSFSPEELKGEIKLSDQELTDFLAKNQNEFKTPEQ 252 Query: 222 FASKI 226 + Sbjct: 253 ISVSY 257 >gi|21356303|ref|NP_651364.1| CG11858 [Drosophila melanogaster] gi|7301304|gb|AAF56433.1| CG11858 [Drosophila melanogaster] gi|17946706|gb|AAL49383.1| RH66629p [Drosophila melanogaster] gi|220958600|gb|ACL91843.1| CG11858-PA [synthetic construct] Length = 130 Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 26/87 (29%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q +I +A E K ++ G + + + FQ+ + Sbjct: 45 EKQGKITEAMEKLKAGQKFPEVAAAYSED-KARQGGDLGWQIRGAMVGPFQDAAFALPIS 103 Query: 257 TT-------NPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 104 TVNNPVYTDPPIKTKFGYHIIMVEGKK 130 >gi|319761381|ref|YP_004125318.1| hypothetical protein Alide_0662 [Alicycliphilus denitrificans BC] gi|317115942|gb|ADU98430.1| hypothetical protein Alide_0662 [Alicycliphilus denitrificans BC] Length = 293 Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 30/306 (9%), Positives = 81/306 (26%), Gaps = 45/306 (14%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTI-NGEVITDGDISKRIALLKLQKINGELEKIAVQE 79 ++++ + + + + + + + NGE IT+ D + + Sbjct: 11 IVLLAGAMVLGAAFAQEAKNPVLARLGNGETITEKD---------------------LTQ 49 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 + + + + ++ + + G S + K Sbjct: 50 YVGRRIDLKAVARNASGVTTVVQEMALARALALEGQSLG----------VPPRSEKGDTR 99 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 I+ + + + E A KN L + + Sbjct: 100 FDDIYAHTIFSKISPACEAPKDEAAARDFYDKNPKAFTLPTAIRLSRVILPAAEKVDGEP 159 Query: 200 KRIKDAEESRLRLP---KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + + K + + + G +++ ++ + + L +Q + Sbjct: 160 AGTWLMNQVQAIGAGRQKFEDAAHRAEQAYKLDAQGDLGWVMLNEENLILRALGDANQGD 219 Query: 257 TTNPYVTQKGVEYIAICDKRDLGG-------EIALKAYL---SAQNTPTKIEKHEAEYVK 306 P V + +KR +A K + Q ++ +Y Sbjct: 220 IVGPVKDGDFVYLFQVAEKRPSQVVPWTEVSAVAAKRAVSYCREQARIDVQQRMFQKYGV 279 Query: 307 KLRSNA 312 +L NA Sbjct: 280 QLDENA 285 >gi|325265262|ref|ZP_08131987.1| hypothetical protein HMPREF0240_04276 [Clostridium sp. D5] gi|324029441|gb|EGB90731.1| hypothetical protein HMPREF0240_04276 [Clostridium sp. D5] Length = 354 Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 24/331 (7%), Positives = 73/331 (22%), Gaps = 35/331 (10%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + F K + +F + + + + + + I G + + + Q Sbjct: 1 MGQFRKRVMIMAAAGLFAVSSLTGCGRSMNNDAVVAEVGEDKIALGVANFYARMQQAQYE 60 Query: 69 -------------------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + ++ L L KQ + + Sbjct: 61 TYYAGMMGTTGEAMWAQEVEEDKDYEDTTKASILEALENMYLLKQHAADYKVELTDDDKK 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + + + F + IQ+ +K + + E Sbjct: 121 AINKAAETFVEDNTLEDKEVVSGYEKYVKTFLELATIQTRMNAPMKEGVDEEVSDEEAAQ 180 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + + + + + ++ K L+ + + Sbjct: 181 KSMQYVLFSYNKTDADGNSE------AMTDDEKAALKETAQKFADDLKNSDKKDLEAAAS 234 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 +V S + + T + G+ + + Sbjct: 235 EAGLEVQTATFDSESTSPTADLVKAADALEEGGVTGIVESDNGIYVAKLTS----NLDRE 290 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + ++ V++ R + I Sbjct: 291 ATDAKKESIVEERKQEQYDSLVEQWRKDTEI 321 >gi|315657935|ref|ZP_07910809.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus lugdunensis M23590] gi|315496971|gb|EFU85292.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus lugdunensis M23590] Length = 322 Score = 52.8 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 28/252 (11%), Positives = 63/252 (25%), Gaps = 13/252 (5%) Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 ++ K E I T + K + V+ + + Sbjct: 44 ADVMKKIGNEQIANTSFSIMLNKILEDKYKDKVDTKDIDDEIKQEQKKYGGKDQFESTLK 103 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 Q K K + ++ + LI+ Sbjct: 104 QQGMSLDDYKQQKKLAAYQKQLLADKIKVSDKDVK-----DNSKKASHILIKVKSKDSDK 158 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQN 248 L ++ +K + ++ K +K + G Y+++ + +F+ Sbjct: 159 EGLSDKKAKEKAEEIQKQVEKDPSKFGEIAKKESMDSSSAKKDGSLGYVIKGQIVDEFEK 218 Query: 249 L-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE---KHEAEY 304 + + T G I + KA + + K++ K + Sbjct: 219 ALFDLKEGKVSKVIKTDYGYHIIKAD---KESDFNSEKANIKEKMIEQKVQKNPKLLTDA 275 Query: 305 VKKLRSNAIIHY 316 K L + Y Sbjct: 276 YKDLLDQYKVDY 287 >gi|159468868|ref|XP_001692596.1| peptidyl-prolyl cis-trans isomerase, parvulin-type [Chlamydomonas reinhardtii] gi|158278309|gb|EDP04074.1| peptidyl-prolyl cis-trans isomerase, parvulin-type [Chlamydomonas reinhardtii] Length = 248 Score = 52.8 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 33/112 (29%), Gaps = 3/112 (2%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260 + K+ EE + ++ G+ +L PQF+ + Sbjct: 58 KAKELEEKLAGGAAFEELAREHSTCGSAKKGGELGWLSRGTFFPQFEAAAFAAPVGGITR 117 Query: 261 YVTQKGVEYIAIC-DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 T +G+ I + +K + L + + + +R + Sbjct: 118 ATTGRGLHVIKVLAEKFQATIQQMNPEELYEMIHNPALLEDVQ--LVDVRED 167 >gi|288800857|ref|ZP_06406314.1| putative PPIC-type PPIASE domain protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332318|gb|EFC70799.1| putative PPIC-type PPIASE domain protein [Prevotella sp. oral taxon 299 str. F0039] Length = 461 Score = 52.8 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 31/273 (11%), Positives = 74/273 (27%), Gaps = 35/273 (12%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + S A I I+GE I Sbjct: 1 MCSAALSAQEHNIVMMIDGEPIARS-----------------------------IFIDAY 31 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 + Y F + + L + + + + + + K + + DVV Sbjct: 32 KQNYPNGVSGKKELYHFAERYADYYLKCKVAAQQQQENAVENRNKKVVSSASILKNDVV- 90 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 I + ++ + + + K +A ++ Sbjct: 91 --VSADIEQQARNIYNKIASEVSSKGGLVKLQDIHIYLSQRASKADEKNAKDQIEAIYNK 148 Query: 210 LRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNNTTNPYVTQKG 266 ++ +D KL + + ++ + G+ +L + L S + P+++ G Sbjct: 149 VKAGEDFGKLAQLYTQNTLYRATKGELPWLAKGQTLSEFENVAFALSPGEVSKPFMSVDG 208 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 + + K D ++A + K+ K Sbjct: 209 YHLLYLQKKVDFLSYNEVRANIIDFILKEKVRK 241 >gi|328768505|gb|EGF78551.1| hypothetical protein BATDEDRAFT_30473 [Batrachochytrium dendrobatidis JAM81] Length = 127 Score = 52.8 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 26/87 (29%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-------NL 249 +I +A E + E+++ + G ++ + FQ Sbjct: 42 EKHSKIMEALELLKSGQRFDKVAEQYSED-KAKAGGSLGWMTRGSMVGVFQDAAFLLVPS 100 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKR 276 T P + G I + D++ Sbjct: 101 TPDKPIYTNPPVKSNFGYHIIMVEDRK 127 >gi|195573805|ref|XP_002104882.1| GD21195 [Drosophila simulans] gi|194200809|gb|EDX14385.1| GD21195 [Drosophila simulans] Length = 130 Score = 52.8 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 26/87 (29%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q +I +A E K ++ G + + + FQ+ + Sbjct: 45 EKQGKITEAMEKLKAGQKFPEVAAAYSED-KARQGGDLGWQIRGAMVGPFQDAAFALPIS 103 Query: 257 TT-------NPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 104 TVNNPVYTDPPIKTKFGYHIIMVEGKK 130 >gi|86143854|ref|ZP_01062222.1| peptidyl-prolyl cis-trans isomerase [Leeuwenhoekiella blandensis MED217] gi|85829561|gb|EAQ48024.1| peptidyl-prolyl cis-trans isomerase [Leeuwenhoekiella blandensis MED217] Length = 707 Score = 52.8 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 24/247 (9%), Positives = 63/247 (25%), Gaps = 11/247 (4%) Query: 44 TTINGEVITDG----------DISKRIALLKLQKING-ELEKIAVQELIVETLKKQEIEK 92 +++ E IT + ++ I +K + + E+ + L K+ E Sbjct: 211 VSVSKEEITAYIKEHSNEFQTEAARNIRYVKFNEDPTLKDEEAVKESLTQLLEKRVEYTA 270 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 + T D+ +++ + V Sbjct: 271 ATKTNDTVAGLATTTNPEDFVNEYSDERYTDAYLFKNELPSAAADELWALDEGAVYGPYK 330 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 + + + + + L L + A + Sbjct: 331 DGETFKISKVVAVTQIPDSVQSSHILLTYQGLANAGAQTRTKAEAKALADSLAGVIKAAP 390 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 K + +F++ G Y + F + + + ++ G I I Sbjct: 391 SKLADLAPEFSADGSKEKGGDLGYATKGRFVKPFNDFIFDGKTGDVGVVESRFGYHVIRI 450 Query: 273 CDKRDLG 279 D++++ Sbjct: 451 TDQKNVQ 457 Score = 40.8 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 22/263 (8%), Positives = 70/263 (26%), Gaps = 4/263 (1%) Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 + R ++ + + + A++ V + E F+ T V +N Sbjct: 439 VESRFGYHVIRITDQKNVQRAIKLATVTKAVEPSQETINNVFNETTKFQMAVTEDKNGFD 498 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + + N + L Q ++++ F + ++E + + V Sbjct: 499 DIAKEGGYNVRPVNNINALDETLPGQGSQREIIRWAFDEERKTGDVERFNVEGGYLVVQV 558 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK---FASKIHDVSIG 232 + + +L + + ++ + + + V++ Sbjct: 559 TKKTEKGLLPADEASPRVTPVLRNQKKAEQIKKNISGSDLSAIASANNTTVQTSPGVNLK 618 Query: 233 KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292 + + P +GV + + ++ + Sbjct: 619 NPTLAGSGTEPKVVGKAFGLEEGEVSEPIEGNRGVYVVKVTKITPARELDNYASFAVQKQ 678 Query: 293 TPTKIEKHEAEYVKKLRSNAIIH 315 + + ++ L+ A I Sbjct: 679 NADRATVNMRI-IQALKDAAEIE 700 >gi|217076606|ref|YP_002334322.1| basic membrane protein, putative [Thermosipho africanus TCF52B] gi|217036459|gb|ACJ74981.1| basic membrane protein, putative [Thermosipho africanus TCF52B] Length = 333 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 30/320 (9%), Positives = 83/320 (25%), Gaps = 47/320 (14%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------------------ 74 + ++ +NGE IT +++ + KL ++++ Sbjct: 17 FSEELPATSTVAVVNGEAITLEQLNRAADVQKLMIGISQVDQTFFSVLSNTEEGVKVILR 76 Query: 75 ---IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + + +L+ + L Q +K G V + + D Sbjct: 77 YKRVVLDDLVNKLLIVQFAQKYGARLSEEEVRNVVDKQISDYLDQQGIDEKTFDMYLQYA 136 Query: 132 NHFKQYLAIQSIWPDV--------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 N + ++ + + N + E+ QK + Sbjct: 137 NMGTLEDFKEKMYFETLVNLSLERLFNVVTKDATVSDEELMDYYQKHIDEYSTPTQYTLS 196 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 L + + K+ N + + +S + ++ Sbjct: 197 LIAFDNEKVANAVKTKIVSGETFDSIASEYGISQFKYENIAEDTTFPG------------ 244 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHE 301 + + Q P + + + + ++ +S K + Sbjct: 245 KLWNYIKNAPQGALLGPIDVDEKYYIFKVENVVPMQSKKFDEVREEISNMILSEKKKNMW 304 Query: 302 AEYVK----KLRSNAIIHYY 317 A ++ K ++ + + Y Sbjct: 305 ANFIDSEFSKFKNESTVEVY 324 >gi|70730940|ref|YP_260681.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas fluorescens Pf-5] gi|68345239|gb|AAY92845.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas fluorescens Pf-5] Length = 91 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 5/77 (6%), Positives = 22/77 (28%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 + + ++ + +K+++ G + + ++ K Sbjct: 11 KTAEEAEQLKQRIAKGEAFDVLAKKYSTCPSGKRGGDLGEVRPGQMVGAIDQVIFKKPLR 70 Query: 256 NTTNPYVTQKGVEYIAI 272 P ++ G + + Sbjct: 71 TVHGPIKSKFGYHLVQV 87 >gi|255627135|gb|ACU13912.1| unknown [Glycine max] Length = 126 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 12/111 (10%), Positives = 27/111 (24%), Gaps = 1/111 (0%) Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 E+ A+ +K+ R + V + ++ + + Sbjct: 13 EVRASHMLIKHEGSRRKASWKDPEGRIIKSTTRENAVSQLKALRDDIVSGKATFEDIASR 72 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 F+ G + F+ ++ T GV I Sbjct: 73 FSDCSSAKRGGDLGPFGRGQMQKPFEEATFALKIGGISDIVDTDSGVHIIK 123 >gi|168047948|ref|XP_001776430.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672156|gb|EDQ58697.1| predicted protein [Physcomitrella patens subsp. patens] Length = 111 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 9/105 (8%), Positives = 34/105 (32%), Gaps = 4/105 (3%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 +R +L + + +R ++ + +K++ G Sbjct: 8 TYVKVRHILSEKQGLMMDVYNQL-QRGWLVFGHKVPPKEFSKLAKKYSECRSAKDGGDLG 66 Query: 236 YLLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 ++ + L P + + +N + + +G + + +++ Sbjct: 67 WVARAKLGTAGPFQEVSFTTPVGSCSNVFQSSQGFHVVLVEARKN 111 >gi|242776498|ref|XP_002478848.1| peptidyl-prolyl cis/trans isomerase [Talaromyces stipitatus ATCC 10500] gi|218722467|gb|EED21885.1| peptidyl-prolyl cis/trans isomerase [Talaromyces stipitatus ATCC 10500] Length = 216 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 8/110 (7%), Positives = 28/110 (25%), Gaps = 1/110 (0%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + R + + + ++ + + + + Sbjct: 88 AEGKIRCAHLLVKHRDSRRPSSWRESNITRTKEEAIEILRGHEQRIKSGEIRLADLAVSE 147 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + G + ++ +F++ ++ TQ GV I Sbjct: 148 SDCSSARKKGDLGFFGRGEMQKEFEDAAFALQPGEISSIVETQSGVHLIE 197 >gi|150003020|ref|YP_001297764.1| peptidyl-prolyl cis-trans isomerase [Bacteroides vulgatus ATCC 8482] gi|149931444|gb|ABR38142.1| peptidyl-prolyl cis-trans isomerase [Bacteroides vulgatus ATCC 8482] Length = 446 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 13/175 (7%), Positives = 45/175 (25%), Gaps = 4/175 (2%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 D + +++ + Q + + +++ Sbjct: 68 YAHDMGIDTLSVFRRQVDWYRGKLLRTYLADAEKEEQAARRLYLQGEQRLQANDWIKIAH 127 Query: 184 LFSIPDNKLQNQGF--VQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLES 240 + Q V++++ E+ +++ G ++ + Sbjct: 128 ISKYLSQNASRQEEMRVRQQMDSVYEALREGADFATLARRYSDDEACKNVGGVLPWMPVN 187 Query: 241 -DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 ++ L +N + P+ + G+ + D+R + L Sbjct: 188 KNMQEWIDKLESLERNKISAPFYSPMGIHIVKWIDRRQGVSFEEKREQLLNYLEK 242 >gi|156741511|ref|YP_001431640.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseiflexus castenholzii DSM 13941] gi|156232839|gb|ABU57622.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseiflexus castenholzii DSM 13941] Length = 517 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 14/215 (6%), Positives = 49/215 (22%), Gaps = 22/215 (10%) Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 E + H + ++ ++ K + ++ Sbjct: 261 YDEYVNEMRRVDPQRRIHLTIDDFRRGLYAQFLRQVLTSKVQEQLVPDATFTPTTDPSSI 320 Query: 176 REYLIRTVLFSI----PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVS 230 I + + + + + + + + + + Sbjct: 321 EVRHILLKVTVPLTATEEERERAFAARRAEAEALLADARAAADFAELARERSEDFNTKET 380 Query: 231 IGKAQYLLESD--------LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 G + Q + ++N+ P T G + + +R + Sbjct: 381 GGTLPLFDKDGKTTDGRQIDPAIVQAIANAAENDIVGPVRTSFGWHIVQLV-RRTVDTRE 439 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 A + ++++ R+ I + Sbjct: 440 VQLNKARA--------EAFERWLEEQRAAINIQRF 466 >gi|320587658|gb|EFX00133.1| peptidyl-prolyl cis trans isomerase [Grosmannia clavigera kw1407] Length = 182 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 17/167 (10%), Positives = 40/167 (23%), Gaps = 2/167 (1%) Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 S F + + + + K + + + A Sbjct: 13 PNWEVRHSNSKNLPYYFNNVDKTSRWEPPNQTNTEQLKLYMAKYHSGQRLQQQQAQQQAG 72 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASK 225 K + ++ V+ R +++ + I E+ R + Sbjct: 73 KIRAAHLLVKHRDSRRPASWREAEITRSKEEARSIISGYEDRMRRGEISLGELALTESDC 132 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G Y D+ +F++ + T G+ I Sbjct: 133 SSARKSGDLGYFGRGDMQKEFEDAAFALKPGEVSGIIETASGLHLIE 179 >gi|302653909|ref|XP_003018770.1| hypothetical protein TRV_07205 [Trichophyton verrucosum HKI 0517] gi|291182444|gb|EFE38125.1| hypothetical protein TRV_07205 [Trichophyton verrucosum HKI 0517] Length = 150 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K + +F+ G + + L F+ + + + Sbjct: 67 EKHSKKEEALEKLRAGAKFDDVAREFSED-KARQGGSLGWKVRGSLDAAFEKAAYELEPS 125 Query: 257 TTN-P----YVTQKGVEYIAICDKR 276 TT P T G I + ++ Sbjct: 126 TTGNPKYVEVKTGFGYHIIMVEGRK 150 >gi|15640000|ref|NP_219453.1| basic membrane protein (tpn39b) [Treponema pallidum subsp. pallidum str. Nichols] gi|189026239|ref|YP_001934011.1| basic membrane protein [Treponema pallidum subsp. pallidum SS14] gi|231640|sp|P29725|BMP_TREPA RecName: Full=Basic membrane protein; Flags: Precursor gi|155055|gb|AAA27475.1| basic membrane protein precursor [Treponema pallidum] gi|3323343|gb|AAC65966.1| basic membrane protein (tpn39b) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018814|gb|ACD71432.1| basic membrane protein [Treponema pallidum subsp. pallidum SS14] gi|291060373|gb|ADD73108.1| basic membrane protein [Treponema pallidum subsp. pallidum str. Chicago] Length = 361 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 46/346 (13%), Positives = 97/346 (28%), Gaps = 48/346 (13%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKLQKING---ELE 73 +++ V + + + + +N E +T G I RI+ ++ + Sbjct: 4 YIVPALLCVAGMGFAHAQSALQPIAEVNLFRREPVTLGQIKARISAIEKEMGKKLSTAER 63 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT----------------GLSA 117 + + LI E L Q EK+GI VN +F + Sbjct: 64 RQFMDSLIDEKLFAQAAEKAGIQVTDAEVNQYFNGMLSQQIGRAVTEAEFANYVKEKQNI 123 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND----FMLKYGNLEMEIPANKQKMKNI 173 + G+ +K++L Q V F G + +I + + K Sbjct: 124 SLDQFMKQQNGMTMAEYKKFLKTQVSTQRYVAQKKADEFRNLKGPEDSQIRSYYELNKQA 183 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 R ++ L S+P + + + + + K S G+ Sbjct: 184 FFRPDTVKLFLISVPKGSGPAAAKAKAQEFVKKLKSSGVKATADIKSKANGAQAGYSAGE 243 Query: 234 --AQY--LLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG------ 280 + + L + ++ T + + K + Sbjct: 244 IYLGKTAVTATQLGLTMEALLEIFGMGVGAVSDVNETANDYQCFIVLKKEEAKILTLSDL 303 Query: 281 ---------EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 +K L++Q +E E +LR + + Sbjct: 304 VEPDKTVSLYEFIKNLLTSQIQQKALEDAIREVSAELRKSGTYKVF 349 >gi|328543803|ref|YP_004303912.1| PpiC-type peptidyl-prolyl cis-trans isomerase [polymorphum gilvum SL003B-26A1] gi|326413547|gb|ADZ70610.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polymorphum gilvum SL003B-26A1] Length = 630 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 16/236 (6%), Positives = 50/236 (21%), Gaps = 21/236 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + F+ + +++ F + I + + + I+ + Sbjct: 1 MLDALRKGAGTFVAKIFIALLILSFAVWGIADIFQGFGRN-VAARVGDTEISLQSFDQAY 59 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 L + + L+ E + + + Sbjct: 60 RRELSALSRQIGRPLSTTEGAQIGLPQQVLGRLVAEAALDDDARAMTLGISDAELIRVIQ 119 Query: 108 QHARNT----GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 G + L GI ++ + + + + ++ Sbjct: 120 ADPVFQRPGGGFDRARLAQLLRANGISEDDYVVERRRLAERQQIAEALSGSLISP---QV 176 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 R + + + + + D + R P+ Sbjct: 177 LLEAFNAYQNETRTVRYLLLTPAAVGSIAEPDDAALEAYFDDNRAAFRAPEYRRLA 232 >gi|322436235|ref|YP_004218447.1| hypothetical protein AciX9_2642 [Acidobacterium sp. MP5ACTX9] gi|321163962|gb|ADW69667.1| hypothetical protein AciX9_2642 [Acidobacterium sp. MP5ACTX9] Length = 257 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 12/140 (8%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGE----LEKIAVQELIVETLKKQ------- 88 ++ +NG++I + D+++ Q + + VQ LI +L Q Sbjct: 57 DQVVAVVNGDLILESDVAEERRFGAFQPFSNPEGTYSREETVQRLIDRSLILQQARLQPD 116 Query: 89 -EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + K T + N + + + + F++ QG ++ + Sbjct: 117 DAVTKEQATSELNELRGVIPACKQYRCETDAGWQKFVEAQGFTVAELTKHWQQRMQVLKF 176 Query: 148 VKNDFMLKYGNLEMEIPANK 167 ++ F + + EI Sbjct: 177 IEVRFRMGIRITQQEIKDYY 196 >gi|167950975|ref|ZP_02538049.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 93 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 3/77 (3%) Query: 241 DLHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 + P + + + P TQ G I + D RDL + ++ T ++ Sbjct: 1 MVKPFADAVQAMEKGKYSEAPVKTQFGWHVILLEDSRDLPA--PSLDAVRSELTTRLQQQ 58 Query: 300 HEAEYVKKLRSNAIIHY 316 A+Y+++LR+ +HY Sbjct: 59 VLADYIQELRAKTKLHY 75 >gi|74662494|sp|Q7RYY4|PIN4_NEUCR RecName: Full=Peptidyl-prolyl cis-trans isomerase pin-4; Short=PPIase pin-4; AltName: Full=Parvulin-14; Short=Par14 Length = 130 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 6/81 (7%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 + ++A +++ + G + + L P+F+ + ++T++ Sbjct: 51 KKEEALAKIRDGADFGAVAREYSED-KARTGGSLGWKQKGTLDPEFEKVAFALETSSTSS 109 Query: 260 P----YVTQKGVEYIAICDKR 276 P TQ G I + K+ Sbjct: 110 PKIGEVKTQFGYHIIMVEGKK 130 >gi|313227202|emb|CBY22349.1| unnamed protein product [Oikopleura dioica] Length = 158 Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 7/87 (8%), Positives = 21/87 (24%), Gaps = 1/87 (1%) Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + + + +++ K + + + + G + Sbjct: 68 WRNNNITISKEEALEQLNKYMVQIESGERSFADLASEVSDCSSAKRCGDLGPFGRGQMQR 127 Query: 245 QFQNLLKK-SQNNTTNPYVTQKGVEYI 270 F+ + T GV I Sbjct: 128 PFEEATFALKVGEMSGVVDTDSGVHII 154 >gi|124003471|ref|ZP_01688320.1| ppic-type ppiase domain protein [Microscilla marina ATCC 23134] gi|123991040|gb|EAY30492.1| ppic-type ppiase domain protein [Microscilla marina ATCC 23134] Length = 693 Score = 52.4 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 25/278 (8%), Positives = 62/278 (22%), Gaps = 21/278 (7%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 +TD ++ + + + E + L E S + Sbjct: 207 KVTDAELEAYMRDHADEYKSQETRSLEYYAL----SIDPSPEDSTKFANLIRQTAKDFAK 262 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM--LKYGNLEMEIPANK 167 A N A S D +++ + ++ Sbjct: 263 AENDSAFAVINSDDPPNMNFQDPTKLPKEIWETVPTLTKGAVVGPLNNKNTYTIYKISDT 322 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + + + + +K ++ N+ + + Sbjct: 323 KADTANYYANVSNLLIKADSTMKQSEQDSARRKAEGILKKLLDNPGDFENQANTYNTDGT 382 Query: 228 DVSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 G + F + G I + ++ Sbjct: 383 KGKGGALGWSNLKTFVKPFSEAIKGTDKIGVIPKVVKSAYGYHIIKVV--HPSTNKLYKV 440 Query: 286 AYLSAQNTPTK--IEKHEA---------EYVKKLRSNA 312 A + P K I++ + +++LR+NA Sbjct: 441 ATIKKTLLPGKSTIDEAFKTTDKLVNNSKTLEELRANA 478 >gi|225431173|ref|XP_002269631.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297735030|emb|CBI17392.3| unnamed protein product [Vitis vinifera] Length = 118 Score = 52.4 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 8/76 (10%), Positives = 18/76 (23%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 V + ++ K + + + G + F+ Sbjct: 40 AVTQIKAIRDDIISGKSKFSDVASQISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVG 99 Query: 256 NTTNPYVTQKGVEYIA 271 ++ T GV I Sbjct: 100 EISDIVETDSGVHIIM 115 >gi|160895085|ref|ZP_02075859.1| hypothetical protein CLOL250_02636 [Clostridium sp. L2-50] gi|156863516|gb|EDO56947.1| hypothetical protein CLOL250_02636 [Clostridium sp. L2-50] Length = 365 Score = 52.4 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 30/326 (9%), Positives = 89/326 (27%), Gaps = 29/326 (8%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSR------IRTTINGEVITDGDISKRIALLKL 65 ++K + +I V +++ + S+ I + I ++ Sbjct: 19 WMKRRILKAISLICACVMLLTLAACGEESQDNTGKYIVFKFGNDNIYLDEVYIYAQTTID 78 Query: 66 QKING------------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + ++E++A +E+I ++ + + + + Sbjct: 79 EYEKEYGSDIWGKTIETDGGIEMDVEEMARREVISNIVQTKALIAQADEYKISLTEEEQA 138 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 Q + + K+ + + ++ + + M + A Sbjct: 139 QAEQEAEDFYNSLTDEQLKETGMEADTPSRVLQENALAKKIYDHVMSDSSAEVSDEQARM 198 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 ++ Y + +K + QK + + +L + N F + Sbjct: 199 TTFYDMFFECYYEDDFGNIVVYSKDKIAEQKQKADEAYTSIKQQLSDNPNLNITFLGHTN 258 Query: 228 DVSIGKAQYLLESDL-----HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 ++ + + + + L + + T+ G + D Sbjct: 259 NLRYAGSHTMSKDQILESYGQEVLDTLYDMQDGDISPVIETENGYHIFQMTYLTDEKATA 318 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKL 308 KA L+ + +V K+ Sbjct: 319 TNKAELTKEANDAYFNNLLTNWVSKI 344 >gi|195354844|ref|XP_002043906.1| GM17827 [Drosophila sechellia] gi|194129144|gb|EDW51187.1| GM17827 [Drosophila sechellia] Length = 126 Score = 52.4 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 26/87 (29%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q +I +A E K ++ G + + + FQ+ + Sbjct: 41 EKQGKITEAMEKLKAGQKFPEVAAAYSED-KARQGGDLGWQIRGAMVGPFQDAAFALPIS 99 Query: 257 TT-------NPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 100 TVNNPVYTDPPIKTKFGYHIIMVEGKK 126 >gi|310824216|ref|YP_003956574.1| ppic-type peptidyl-prolyl cis-trans isomerase [Stigmatella aurantiaca DW4/3-1] gi|309397288|gb|ADO74747.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Stigmatella aurantiaca DW4/3-1] Length = 329 Score = 52.4 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 30/249 (12%), Positives = 74/249 (29%), Gaps = 16/249 (6%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + I + + + + E F +QG+ + A Sbjct: 44 VTLEQLQTYISQMNPAARTRVQSVEQRREYAEGLARFELFVREAQRQGLEKDPEVLEAAK 103 Query: 141 QSIWPDVVKNDFMLKYGN-LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 +++ ++ +F K +I A + K V R +P + + Sbjct: 104 RAMVQRLLHKEFEEKAAPVTPEDIAAYYEMNKAEFVSPARWRYSHLLVPAPQGSADRAAK 163 Query: 200 KRIKDAEESRLRLPKDCNK-------LEKFASKIHDVSIGKAQYLLESDLHPQFQNL--- 249 K++ A + R + + E + + + +L + Sbjct: 164 KKLAQALLEKARKLQPLDFDGFDALGGEASGNPDTKPASADTHLVTAEELKERLGPEVAA 223 Query: 250 ---LKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEY 304 + +T+ + KG + + D R A+ + L ++ + + + Y Sbjct: 224 AAGKLQRVGDTSAVVESPKGFHLLKLTDLRPERNQPLDAVSSMLRSRIARERRDASVSAY 283 Query: 305 VKKLRSNAI 313 KL+ A Sbjct: 284 TVKLQEQAQ 292 >gi|294775655|ref|ZP_06741163.1| PPIC-type PPIASE domain protein [Bacteroides vulgatus PC510] gi|294450499|gb|EFG18991.1| PPIC-type PPIASE domain protein [Bacteroides vulgatus PC510] Length = 441 Score = 52.4 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 13/175 (7%), Positives = 45/175 (25%), Gaps = 4/175 (2%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 D + +++ + Q + + +++ Sbjct: 63 YAHDMGIDTLSVFRRQVDWYRGKLLRTYLADAEKEEQAARRLYLQGEQRLQANDWIKIAH 122 Query: 184 LFSIPDNKLQNQGF--VQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLES 240 + Q V++++ E+ +++ G ++ + Sbjct: 123 ISKYLSQNASRQEEMRVRQQMDSVYEALREGADFATLARRYSDDEACKNVGGVLPWMPVN 182 Query: 241 -DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 ++ L +N + P+ + G+ + D+R + L Sbjct: 183 KNMQEWIDKLESLERNKISAPFYSPMGIHIVKWIDRRQGVSFEEKREQLLNYLEK 237 >gi|115371844|ref|ZP_01459157.1| peptidyl-prolyl cis-trans isomerase D [Stigmatella aurantiaca DW4/3-1] gi|115371079|gb|EAU70001.1| peptidyl-prolyl cis-trans isomerase D [Stigmatella aurantiaca DW4/3-1] Length = 334 Score = 52.4 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 30/249 (12%), Positives = 74/249 (29%), Gaps = 16/249 (6%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + I + + + + E F +QG+ + A Sbjct: 49 VTLEQLQTYISQMNPAARTRVQSVEQRREYAEGLARFELFVREAQRQGLEKDPEVLEAAK 108 Query: 141 QSIWPDVVKNDFMLKYGN-LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 +++ ++ +F K +I A + K V R +P + + Sbjct: 109 RAMVQRLLHKEFEEKAAPVTPEDIAAYYEMNKAEFVSPARWRYSHLLVPAPQGSADRAAK 168 Query: 200 KRIKDAEESRLRLPKDCNK-------LEKFASKIHDVSIGKAQYLLESDLHPQFQNL--- 249 K++ A + R + + E + + + +L + Sbjct: 169 KKLAQALLEKARKLQPLDFDGFDALGGEASGNPDTKPASADTHLVTAEELKERLGPEVAA 228 Query: 250 ---LKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEY 304 + +T+ + KG + + D R A+ + L ++ + + + Y Sbjct: 229 AAGKLQRVGDTSAVVESPKGFHLLKLTDLRPERNQPLDAVSSMLRSRIARERRDASVSAY 288 Query: 305 VKKLRSNAI 313 KL+ A Sbjct: 289 TVKLQEQAQ 297 >gi|330950422|gb|EGH50682.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae Cit 7] Length = 91 Score = 52.4 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 6/77 (7%), Positives = 20/77 (25%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + + + + +K +S G + + ++ K Sbjct: 11 KTAEEAEQLKLRIAKGGAFDVLAKKHSSCPSGKRGGDLGEVRPGQMVGAIDQVIFKKPLR 70 Query: 257 TT-NPYVTQKGVEYIAI 272 P ++ G + + Sbjct: 71 VVHGPIKSKFGYHLVQV 87 >gi|294930458|ref|XP_002779567.1| peptidyl-prolyl cis-trans isomerase ESS1, putative [Perkinsus marinus ATCC 50983] gi|239888920|gb|EER11362.1| peptidyl-prolyl cis-trans isomerase ESS1, putative [Perkinsus marinus ATCC 50983] Length = 110 Score = 52.4 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 8/85 (9%), Positives = 27/85 (31%), Gaps = 1/85 (1%) Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + + + +++ E+ + + + + G + ++ F Sbjct: 26 CHEISISHDEALKEIKDMIEKLKADKRIFSEMAKARSDCGSYKNGGDLGFFDRGEMQRPF 85 Query: 247 QNLLKK-SQNNTTNPYVTQKGVEYI 270 +++ + P T GV +I Sbjct: 86 EDVAFSLKIGELSGPVETDSGVSFI 110 >gi|162449966|ref|YP_001612333.1| peptidyl-prolyl cis-trans isomerase [Sorangium cellulosum 'So ce 56'] gi|161160548|emb|CAN91853.1| peptidyl-prolyl cis-trans isomerase [Sorangium cellulosum 'So ce 56'] Length = 302 Score = 52.4 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 26/280 (9%), Positives = 64/280 (22%), Gaps = 41/280 (14%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + IT ++ +R+A + + Q ++ N VN Sbjct: 2 ARVGDAAITASEVERRLAQVPP-------------------FQLQTFGRTPEEIRKNFVN 42 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 V R L+ + L ++ + + L + + + E+ Sbjct: 43 QVLV---RELLLAQGAAAQKLTERADVQDRVRGVLRSALLQRIQAEAAASSPVTDEEVRA 99 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + + + +L + ++K + K +K Sbjct: 100 YYEAHRDRFSSPAMVALWRILVATRGEAEAILAELKKDPSPQRFKEIAREKSLDKA---- 155 Query: 224 SKIHDVSIGKAQYLLES---------DLHPQFQNLLKKSQNN-TTNPYVTQKGVEYIAIC 273 + G ++ P G + Sbjct: 156 ---TSMRGGDLGFVASDGTTSEPGLKVDPGLLSAAAGVKDAELVPEPVPEGDGFAVLWRR 212 Query: 274 DKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 R + K E + + +LR+ Sbjct: 213 QSRKPVSRSLEQEAPSIRQILAHGKAEAQVKQLLDRLRAQ 252 >gi|149244896|ref|XP_001526991.1| peptidyl-prolyl cis-trans isomerase 1 [Lodderomyces elongisporus NRRL YB-4239] gi|146449385|gb|EDK43641.1| peptidyl-prolyl cis-trans isomerase 1 [Lodderomyces elongisporus NRRL YB-4239] Length = 176 Score = 52.4 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 7/77 (9%), Positives = 23/77 (29%), Gaps = 1/77 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254 + K + K + + + G + + ++ P F++ + Sbjct: 97 EAISIAKKHLAQILSGEAKFADVAQAESDCSSHARGGDLGFFGKREMQPAFESTVYSMHV 156 Query: 255 NNTTNPYVTQKGVEYIA 271 ++ T G+ + Sbjct: 157 GEISDVIETDSGIHLVQ 173 >gi|259503634|ref|ZP_05746536.1| foldase PrsA1 [Lactobacillus antri DSM 16041] gi|259168408|gb|EEW52903.1| foldase PrsA1 [Lactobacillus antri DSM 16041] Length = 318 Score = 52.4 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 28/293 (9%), Positives = 74/293 (25%), Gaps = 38/293 (12%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + ++ + ++ A ++ T +G IT + + K Sbjct: 1 MKSKKLIAVIAGAALM-LPLAACGNKAVATTSGGKITQSEYYSSMKATSN-------GKQ 52 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 +Q++I++ + ++E K N + S + + Sbjct: 53 VLQQMILDKVLEKEYGKQVSDKQVN----------AQYNSYKSQYGSQFSSFLQQNGMTE 102 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q +++ ++ + + ++ Sbjct: 103 KSFKQQLRSNLLLEAAV-----------RDYSHITNKRINAQWKKYQPKVQTAEILVGSK 151 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD------LHPQFQNL 249 Q I S + + ++ + + G + D + Sbjct: 152 NDAQDIIDQLNSSSDKYKTFKKLAKSKSTDSSNKNNG--GRVPAFDNTDNSLDSAYKEAA 209 Query: 250 LKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 K T P T G + I + + G + A L Q + Sbjct: 210 FKLKTGEYTTTPVKTDDGYQVIYMIEHPAKGKKSQHIADLRTQIVQENMNNRT 262 >gi|256085044|ref|XP_002578734.1| rotamase [Schistosoma mansoni] gi|238664117|emb|CAZ34972.1| rotamase, putative [Schistosoma mansoni] Length = 154 Score = 52.4 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 9/109 (8%), Positives = 24/109 (22%), Gaps = 2/109 (1%) Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFA 223 + + + R + + + ++ + + Sbjct: 43 NKVRCLHLLVKHNESRRPSSWKQQNITRSKDEALNLIKSKIKQQIESGEYTFEELARTES 102 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 S G + + F++ K P T G+ I Sbjct: 103 DCSSAHSGGDLNFFSRGQMQKPFEDAAFKLEIGEMCGPVYTDSGIHLIK 151 >gi|300770131|ref|ZP_07080010.1| peptidylprolyl cis-trans isomerase [Sphingobacterium spiritivorum ATCC 33861] gi|300762607|gb|EFK59424.1| peptidylprolyl cis-trans isomerase [Sphingobacterium spiritivorum ATCC 33861] Length = 703 Score = 52.4 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 15/127 (11%), Positives = 38/127 (29%), Gaps = 3/127 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 + + + + + + +F+ + G Sbjct: 349 KASHILLNPTAEGGVDKAKAKADSIKNLIAKGEAFGPLAIQFSQDEGSKANGGDLGTFGR 408 Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 + P+F + + + +Q GV + I + +G +KA + + + E Sbjct: 409 GRMVPEFDKAVFEGKTGDVLIVNSQFGVHIVKIE--KQIGNSKVVKAAIVDKTISSGKET 466 Query: 300 HEAEYVK 306 +A Y K Sbjct: 467 IDAAYAK 473 >gi|237756262|ref|ZP_04584821.1| hypothetical protein SULYE_0873 [Sulfurihydrogenibium yellowstonense SS-5] gi|237691581|gb|EEP60630.1| hypothetical protein SULYE_0873 [Sulfurihydrogenibium yellowstonense SS-5] Length = 460 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 19/166 (11%), Positives = 40/166 (24%), Gaps = 6/166 (3%) Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 K + + +++ V I + + +L Sbjct: 291 DKKVSFTKAQNEYYISLFNGESLKSIPYEQVKNEIKQKLERELSQKALQDMQKTTDITQL 350 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 K ++ S + + DL+ + P T+ G+ + Sbjct: 351 LKQNKTEKQTISDNTIQELVVKFGIKREDLNKL----ANLKVGEISKPISTENGILIFKL 406 Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + ++ K + K YV LR A I Sbjct: 407 TEIKEPDKSQVDETKKTILPFIKSQKFNDVYQMYVDSLRKKAKIKI 452 Score = 42.7 bits (98), Expect = 0.073, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 66/184 (35%), Gaps = 12/184 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56 M K+ S I L T F + IV I+ YK + +NG+ I + Sbjct: 1 MFDKISQSKWKNIVLFITVFAFVATSIVAIIVYKLSGEING-VAEVNGKEIPFYEFNYAY 59 Query: 57 -----SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 + ++ L + + +++K V +LI + L QE EK GIT S V ++ + Sbjct: 60 EMTARNMQMQNLDISNLKDQIKKEVVNDLIEKELLYQEAEKEGITATSEQVKNEILKISA 119 Query: 112 N--TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 G + + + + + + + +K + + EI +K Sbjct: 120 FQVNGKFDKQIYLQIINSFGLTPDAFENILKKELSVNNLKTILLSTIYVSDEEIETFTKK 179 Query: 170 MKNI 173 Sbjct: 180 QLTR 183 >gi|73984320|ref|XP_849005.1| PREDICTED: similar to Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 (Rotamase Pin4) (PPIase Pin4) (Parvulin 14) (Par14) (Peptidyl-prolyl cis/trans isomerase EPVH) (hPar14) [Canis familiaris] Length = 131 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-------NLLKKS 253 +I +A E + +++ G ++ + FQ Sbjct: 50 KIMEAMEKLKSGMRFNEVATQYSED-KARQGGDLGWMTRGSMVGPFQAAAFALPVSGPDK 108 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 109 PVFTDPPIRTEFGYRIIMVEGRK 131 >gi|58584787|ref|YP_198360.1| parvulin-like peptidyl-prolyl isomerase, PPID [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419103|gb|AAW71118.1| Parvulin-like peptidyl-prolyl isomerase, PPID [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 602 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/389 (9%), Positives = 92/389 (23%), Gaps = 81/389 (20%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI----------- 56 ++ +F +T + + + ++ S + EVIT G+ Sbjct: 2 NVKNFFTKVTAVILTCLLIFTGVGNFLSDENKKEEVARVGKEVITLGEYKLLYQSYGKQI 61 Query: 57 ------SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 +++ LK +N +E+ + LI + E + Sbjct: 62 SGSDISEEQVKRLKYDLLNALIEQKLLFNLISDLGLVVGEESIKDHIRNTKYFQNDKGKF 121 Query: 111 RNTGLSAE--------------------DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 + I+ + + Sbjct: 122 DKEKFHEALNSLHMTEGEYVAKLEKILPAIMFITSLFHDNYPVTFGEKIDEQIYKNRHQT 181 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK------- 203 + + + + + + Y F P+ + + ++ Sbjct: 182 RVVNIVKITQNAVTNVTEPDDRVLLDLYEKNKSHFYYPEYRTAQYISLGQKYFANQIQIS 241 Query: 204 ----------------------------DAEESRLRLPKDCNKLEKFASKIHDVSIGK-- 233 +AE +R +D E+ K + + Sbjct: 242 DREVDDIIKQQELKDQRDIFNLIFYTKEEAETARKEFEEDKVSFEQIVEKFGKTKLEETR 301 Query: 234 AQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSA 290 + + L + + + + G I + + E LK + Sbjct: 302 INNITKDSLPEDMREKVFALKVGEVSEVLASSFGWHIIKVDSAHQISNENLVDLKKNIKL 361 Query: 291 QNTPTKIEKHEAEYVK----KLRSNAIIH 315 T K + +++ K+ + A I Sbjct: 362 VLTNQKSFEKVNDFINQVNYKIYNGATIE 390 >gi|297263527|ref|XP_002798823.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like [Macaca mulatta] Length = 197 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 25/83 (30%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E + +++ G ++ + FQ Sbjct: 116 KIMEAVEKLKSGMRFNEVASQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDK 174 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 + T P T+ G I + ++ Sbjct: 175 RVFTDPPVKTKFGDHIIMVEGRK 197 >gi|195567999|ref|XP_002107543.1| GD17528 [Drosophila simulans] gi|194204953|gb|EDX18529.1| GD17528 [Drosophila simulans] Length = 166 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 11/155 (7%), Positives = 31/155 (20%), Gaps = 1/155 (0%) Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 E + + + Y + P Q + + Sbjct: 8 PEGWEKRTSRSTGMSYYLNMYTKESQWDQPTEPAKKAGGASAGVADAPDEVQCLHLLVKH 67 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + R + + + + + ++ G Sbjct: 68 KGSRRPSSWREANITRTKEEAQLLLEVYRNKIVNQEATFEELARSYSDCSSAKRGGDLGK 127 Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + F+ K + N + + G+ I Sbjct: 128 FGRGQMQAAFEEAAFKLNVNQLSGIVDSDSGLHII 162 >gi|77459306|ref|YP_348813.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens Pf0-1] gi|77383309|gb|ABA74822.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Pseudomonas fluorescens Pf0-1] Length = 91 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 6/77 (7%), Positives = 21/77 (27%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 + + ++ +KF++ G + + ++ K Sbjct: 11 KTAEEAEKLKQRIANGEAFDVLAKKFSTCPSGKRGGDLGEVRPGQMVGAIDAVIFKKPLR 70 Query: 256 NTTNPYVTQKGVEYIAI 272 P ++ G + + Sbjct: 71 TVHGPIKSKFGYHLVQV 87 >gi|146307053|ref|YP_001187518.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas mendocina ymp] gi|145575254|gb|ABP84786.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas mendocina ymp] Length = 92 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 8/77 (10%), Positives = 17/77 (22%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 + ++ K + G + + ++ K Sbjct: 12 KTEAEAAALKKRIAAGEAFDMLARKHSICPSGKKGGDLGEVRPGQMVRAVDQVIFKKPLR 71 Query: 256 NTTNPYVTQKGVEYIAI 272 P TQ G I + Sbjct: 72 EVHGPVKTQFGYHLIQV 88 >gi|322496765|emb|CBZ31835.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 115 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 20/77 (25%), Gaps = 1/77 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 V + K + + + G ++ F++ K Sbjct: 36 EAVTELQKWRQSIEEGRVTFEEAARQRSDCSSYARGGDLGVFGPGEMMKPFEDATKSLEV 95 Query: 255 NNTTNPYVTQKGVEYIA 271 + + VT GV I Sbjct: 96 GHVSGIVVTDSGVHIIK 112 >gi|229590093|ref|YP_002872212.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Pseudomonas fluorescens SBW25] gi|312961365|ref|ZP_07775870.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens WH6] gi|229361959|emb|CAY48859.1| peptidyl-prolyl cis-trans isomerase C (rotamase C) [Pseudomonas fluorescens SBW25] gi|311285023|gb|EFQ63599.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens WH6] Length = 91 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 5/77 (6%), Positives = 22/77 (28%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + + ++ + +K+++ G + + ++ K Sbjct: 11 KTSEEAEQLKQRIAKGEAFDVLAKKYSTCPSGKRGGDLGEVRPGQMVGAIDAVIFKKPVK 70 Query: 257 TT-NPYVTQKGVEYIAI 272 P ++ G + + Sbjct: 71 VVHGPIKSKFGYHLVQV 87 >gi|303291045|ref|XP_003064809.1| peptidyl-prolyl cis-trans isomerase [Micromonas pusilla CCMP1545] gi|226453835|gb|EEH51143.1| peptidyl-prolyl cis-trans isomerase [Micromonas pusilla CCMP1545] Length = 280 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 8/88 (9%), Positives = 24/88 (27%), Gaps = 1/88 (1%) Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK 252 + + + E +++ + G ++ F++ Sbjct: 84 DASDEAQLDELYERVVAGADDLATLAAEYSKCPSGKANGGLIGWIGRGQTVKPFEDAAFA 143 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + T GV + + D+R+ Sbjct: 144 TPIGGVTRAKTTFGVHVVQVLDQREAPA 171 >gi|319938240|ref|ZP_08012637.1| hypothetical protein HMPREF9488_03473 [Coprobacillus sp. 29_1] gi|319806533|gb|EFW03191.1| hypothetical protein HMPREF9488_03473 [Coprobacillus sp. 29_1] Length = 311 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 22/268 (8%), Positives = 71/268 (26%), Gaps = 16/268 (5%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 + + S + +I+G+ I DI + L L + +LI Sbjct: 1 MLVLSGCSSSAVKEDGKYVVASIDGKNILADDIYE--KLSSSTAGKNALFTYLLDQLIT- 57 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 S + +++ + +N ++ L+ + +S+ Sbjct: 58 ---ANFPVTSDMKDNASNIVSNIEASYKNQYSDNDEAQKQLESALSSSGYESMDAYKESL 114 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + ++F+ KY + +++ + + +++ Sbjct: 115 IQSLQYSEFIKKYVKANFDEVFEDYY----KQEAPRYISMIKVSMSDPDKPTETETEKLN 170 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL------LESDLHPQFQNLLKKSQNNT 257 + + ++ + G + +S + L + Sbjct: 171 EVKSLLKTDKGFAEIASSYSDDDSKSAKGNLGIIDSTSGLKDSYGEDVEKAALSLEKGKV 230 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALK 285 ++ G ++ + L+ Sbjct: 231 SDAIKGTNGYYFLYCTSTDKDTIKKDLE 258 >gi|227538586|ref|ZP_03968635.1| peptidylprolyl cis-trans isomerase [Sphingobacterium spiritivorum ATCC 33300] gi|227241505|gb|EEI91520.1| peptidylprolyl cis-trans isomerase [Sphingobacterium spiritivorum ATCC 33300] Length = 703 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 15/127 (11%), Positives = 38/127 (29%), Gaps = 3/127 (2%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239 + + + + + + +F+ + G Sbjct: 349 KASHILLNPTAEGGVDKAKAKADSIKNLIAKGEAFGPLAIQFSQDEGSKANGGDLGTFGR 408 Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 + P+F + + + +Q GV + I + +G +KA + + + E Sbjct: 409 GRMVPEFDKAVFEGKTGDVLIVNSQFGVHIVKIE--KQVGNSKVVKAAIVDKAISSGKET 466 Query: 300 HEAEYVK 306 +A Y K Sbjct: 467 IDAAYAK 473 >gi|170572126|ref|XP_001891992.1| Pin1-type peptidyl-prolyl cis-trans isomerase, BmPin1 [Brugia malayi] gi|158603155|gb|EDP39196.1| Pin1-type peptidyl-prolyl cis-trans isomerase, BmPin1 [Brugia malayi] Length = 186 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 12/108 (11%), Positives = 30/108 (27%), Gaps = 1/108 (0%) Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + + I +K + + K EE+ + K + ++F+ Sbjct: 76 HCAHLLVKHSGSRRPSSWRSDVITRSKEDARKILAGYRKQIEEAXDKKSKLRDLAKEFSD 135 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIA 271 G + + F++ ++ T G+ I Sbjct: 136 CSSAKRGGDLGFFKRRQMQKSFEDAAFALGVGQLSDIVDTDSGLHLIY 183 >gi|262372262|ref|ZP_06065541.1| ppic-type ppiase domain-containing protein [Acinetobacter junii SH205] gi|262312287|gb|EEY93372.1| ppic-type ppiase domain-containing protein [Acinetobacter junii SH205] Length = 623 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 94/317 (29%), Gaps = 18/317 (5%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 T + ++ + L +V I Y S + + ++NG+ I++ ++ Sbjct: 1 MESFRTLIKGWLGKVLLVLFLTPLALVGIEGYFSGGNKADVAKSVNGQDISNKELETATK 60 Query: 62 LLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 K Q +++ A+ LI +L +Q+ EK GI+ + Q Sbjct: 61 NYKDQYLSLVKGDESLLNLSLIQEKALDALIARSLLQQQAEKLGISLSDTQLEQMLAQQP 120 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + + + +A + D + + ++ Q++ Sbjct: 121 SFQENGQFSQKLYENYLRSVGMTNQGLIAS--LRQDHALKMISSTLMDYALVSKSDLQQL 178 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 N+ + + + D K Q+ + + + + N + + Sbjct: 179 ANLQTEQRTLHLASIKLDDYKKGITVSNQEIADYYNKHKNQFKQVANVDVDYVVLTPALL 238 Query: 231 IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 E++L ++ + K Q + + D RD L + A Sbjct: 239 PQANVAPSEAELQQAYKAFVDKQQKDVKREVK-----HILITTDSRDAATAQKLANDVYA 293 Query: 291 QNTPTKIEKHEAEYVKK 307 + A + Sbjct: 294 KIQSGMSFADAAAQFSE 310 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 44/159 (27%), Gaps = 4/159 (2%) Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 E E+ + + ++ R V + ++ QK D Sbjct: 240 QANVAPSEAELQQAYKAFVDKQQKDVK-REVKHILITTDSRDAATAQKLANDVYAKIQSG 298 Query: 213 PKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + +F+ G + F N + + P TQ G I Sbjct: 299 MSFADAAAQFSEDPSSKTQGGLVEAYAPGVFSTDFDNAVNSLKNGQISKPVKTQYGYHII 358 Query: 271 AICD-KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 A D+ A K L A+ TK ++ V L Sbjct: 359 AANAPAIDIPSYEAEKPRLIAEVQKTKQANLFSDTVNSL 397 >gi|160913548|ref|ZP_02076239.1| hypothetical protein EUBDOL_00024 [Eubacterium dolichum DSM 3991] gi|158434100|gb|EDP12389.1| hypothetical protein EUBDOL_00024 [Eubacterium dolichum DSM 3991] Length = 334 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 30/327 (9%), Positives = 83/327 (25%), Gaps = 29/327 (8%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIV----------SYKSWAMSSRIRTTINGEVITDGDISK 58 + + V +IF + S K+ + + I D+ K Sbjct: 2 IEMLKRQWFVVLVALIFIGFAVFCIYDSNKDRVSGKTNDGKDVVAAMKDDTYIYADDLDK 61 Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 + + +IAV + + +K+ + K+ + + G + Sbjct: 62 ILYNNYGSNLVSTKFQIAV---VSQAVKENDELKTQASNYKANFITQAESNMSMYGYTDL 118 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 +G ++ M K + ++ + ++ Sbjct: 119 KEYINAQLNPLGYDYDTLDEYAMLAVK-------MNKLTSDYVKAHLDTLFTDYYNAKQP 171 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL 237 + + + +++I+ E+ +K++ + G + Sbjct: 172 RTVSHILIKMADSQNPTEEEKEKIEKVEKELAAGKDFAEVAKKYSDDTGSKENGGYLGLM 231 Query: 238 LES-DLHPQFQNLLKK-SQNNTTNPYVTQK----GVEYIAICDK--RDLGGEIALKAYLS 289 + F+N K + G I + + L + L+ + Sbjct: 232 DKDTQYVESFKNAAFKLKSGEVSEWVKEDNSSYKGWHMIKVHETDKDKLLKDKDLEDTIV 291 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + I Y Sbjct: 292 NAILNSDTSNAYGNAIWEASKKLDIKY 318 >gi|167756723|ref|ZP_02428850.1| hypothetical protein CLORAM_02264 [Clostridium ramosum DSM 1402] gi|167702898|gb|EDS17477.1| hypothetical protein CLORAM_02264 [Clostridium ramosum DSM 1402] Length = 332 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 22/314 (7%), Positives = 85/314 (27%), Gaps = 30/314 (9%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSR--IRTTIN----GEVITDGDISKRIALLKLQKING 70 V+ F + + + ++N + I DI + + Sbjct: 7 AAALVVTSFLLTGCQNSSKTVKEDGKYVVASLNSGKKDKNIFADDIFNDV--ISTASGKS 64 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 +Q+L+ + E ++ + + ++ + + + Sbjct: 65 SYFNAVLQQLMDQKFPIDEDMETDANETVDQIQTYYENQYGDNAETQLQTALSSSGFNSL 124 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 D + + + + ++ +E ++ T +++ + Sbjct: 125 DEYRENMVRVYQRCNFLL----------AYVEKNFDEVFDDYYTQASPREASLIKVSMTD 174 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYL-LESDLHPQFQN 248 ++ + + + ++ + + + GK + S L F + Sbjct: 175 VENPTADETAKLSEVTALLSSSKSFGDIAKDYSDDTNTNKNKGKLGIVDTTSGLSQTFGS 234 Query: 249 LLKKS-----QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 ++ T+ G ++ + + ++K + + + Sbjct: 235 DVETKILALASGETSEAIKGTDGYYFVKVTS----TDKDSIKKEIKKDLSIDTPLIAYDK 290 Query: 304 YVKKL-RSNAIIHY 316 Y+ + + + Y Sbjct: 291 YMSYIVYQSYNVKY 304 >gi|301166280|emb|CBW25855.1| putative peptidyl-prolyl cis-trans isomerase [Bacteriovorax marinus SJ] Length = 100 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 6/66 (9%), Positives = 19/66 (28%), Gaps = 1/66 (1%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 E + ++ + G + + P+ + + + + P ++ Sbjct: 31 EKLQQGEDFGELAKELSECNSSQKGGDLGLFVSGQVAPEVERAIYHLKIDEISEPVESEY 90 Query: 266 GVEYIA 271 G I Sbjct: 91 GFHIIQ 96 >gi|209547141|ref|YP_002279059.1| hypothetical protein Rleg2_5108 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538385|gb|ACI58319.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 315 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 24/253 (9%), Positives = 63/253 (24%), Gaps = 17/253 (6%) Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 LI + ++ I + V V + Sbjct: 35 RLITPAPELATADREKIALTKDDVRQLAVTWLAQGRSAPTPDELRTLMDQKVTEEILFRE 94 Query: 139 AIQS---IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 A+ +++K K L ++ ++ Y R+ F++ + Sbjct: 95 AVSLGLDRDDEIIKRRLAQKMDFLAADLAKLEEPNNAQLEEWYAKRSDRFALSPHLSFRH 154 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA-------QYLLESDLHPQF-- 246 + A + K A S+ + +F Sbjct: 155 LYFSFDKHGAAAREAADAALPSVAGKPADSPEVGSVADPFMFRNFYGDATPEQMAKEFGP 214 Query: 247 ---QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHE 301 + L + P + G I + + + + + + + + Sbjct: 215 DFAKALFTLKPGSWQGPIQSGYGWHLIWVDSIEPGRVPAFEEIAPAVKSAWLDERYSEVK 274 Query: 302 AEYVKKLRSNAII 314 + +K++RS ++ Sbjct: 275 SNALKEMRSRYVV 287 >gi|312282999|dbj|BAJ34365.1| unnamed protein product [Thellungiella halophila] Length = 119 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 11/114 (9%), Positives = 28/114 (24%), Gaps = 1/114 (0%) Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 ++ A+ +K+ R + V++ E+ + Sbjct: 3 SRDQVKASHILIKHQGSRRKASWKDPEGKIIMTTTREAAVEQLKSIREDIVSGKANFEDV 62 Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + + G + F+ + ++ T GV I Sbjct: 63 ATRVSDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIK 116 >gi|195152313|ref|XP_002017081.1| GL21710 [Drosophila persimilis] gi|194112138|gb|EDW34181.1| GL21710 [Drosophila persimilis] Length = 130 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 26/87 (29%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------L 249 Q +I +A E K ++ G + + + FQ+ Sbjct: 45 EKQGKIMEAMEKLKAGQKFPEVATAYSED-KARQGGDLGWQIRGAMVGPFQDAAFALPIS 103 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKR 276 + T P T+ G I + K+ Sbjct: 104 NVNNPVYTDPPVKTKFGYHIIMVEGKK 130 >gi|153872834|ref|ZP_02001612.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Beggiatoa sp. PS] gi|152070703|gb|EDN68391.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Beggiatoa sp. PS] Length = 253 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 30/231 (12%), Positives = 69/231 (29%), Gaps = 41/231 (17%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + +F V ++ A + INGEV+T D + Q + Sbjct: 1 MFKLSIRTCLFSGVLFMTVAVHATPNEPLAIINGEVLTQQDYDDYVKARTTQTQRRATPE 60 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 I ++EL+ L KQ+ K + + + + + Sbjct: 61 ILLEELVQRELLKQDALKKKLEQHPDFIRKLTD----------------MRNSLLVAMAI 104 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 L ++ +K ++ + ++E+ +EY IR +L Sbjct: 105 HDDLEKHALDEAALKKEYDKQIAHVEV-------------PKEYQIRHIL---------- 141 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHP 244 ++ K + ++ + K G+ ++ + + P Sbjct: 142 -VETAEQAKAIIAELEQGKAFGELAKEKSIDKPSANKAGELGWITKQQIDP 191 >gi|257866945|ref|ZP_05646598.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus casseliflavus EC30] gi|257873278|ref|ZP_05652931.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus casseliflavus EC10] gi|257877021|ref|ZP_05656674.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus casseliflavus EC20] gi|257801001|gb|EEV29931.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus casseliflavus EC30] gi|257807442|gb|EEV36264.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus casseliflavus EC10] gi|257811187|gb|EEV40007.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus casseliflavus EC20] Length = 344 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 31/293 (10%), Positives = 70/293 (23%), Gaps = 37/293 (12%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L+ + + + + SS T+ G IT D + + Sbjct: 1 MKKKLLLVAVSAMSLFALAACGNSSEEIATMKGGKITVQDFYDKAKTSSEN-------QQ 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A++++I + K EK G ++ F A G S S+ + Sbjct: 54 ALRQMI---VLKVFNEKYGDDVTEEMIDEQFNNVAEQYGGSDSFESTLTAS-----GYTV 105 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + ++ + E+ + + Sbjct: 106 KSYRAELKEQLALREGLKANMDITDEEMKTAWDSFHPEVEAQIIKVAS------------ 153 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL--LKKS 253 + E + EK G ++ S P Sbjct: 154 -EDDAKDVLEEAKKDDADFGEIAKEKSTDAATKEDGGTIKFDSTSTAVPNEVKTAAFDLK 212 Query: 254 QNNTTNPYVTQKG------VEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK 299 + + + +D G ++ K L+ T + Sbjct: 213 DGEISEVISATNTSTYTTEYYIVKMVKNQDKGNDMDKYKDELTEIAQNTLLND 265 >gi|118784241|ref|XP_313593.3| AGAP004321-PA [Anopheles gambiae str. PEST] gi|116128413|gb|EAA09299.3| AGAP004321-PA [Anopheles gambiae str. PEST] Length = 167 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 8/107 (7%), Positives = 27/107 (25%), Gaps = 1/107 (0%) Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 Q + R + + + ++ ++ + ++++ Sbjct: 57 HEVQCAHLLVKHNKSRRPSSWREENITRSKEEALEILESYRKKIQSNEATLQELAQRYSD 116 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 G + F++ + ++ T GV I Sbjct: 117 CSSAKRGGDLGMFKRGMMQKPFEDAAFALKVGDMSDIVDTDSGVHLI 163 >gi|281355162|ref|ZP_06241656.1| hypothetical protein Vvad_PD3268 [Victivallis vadensis ATCC BAA-548] gi|281318042|gb|EFB02062.1| hypothetical protein Vvad_PD3268 [Victivallis vadensis ATCC BAA-548] Length = 314 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 14/312 (4%), Positives = 79/312 (25%), Gaps = 25/312 (8%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 ++ + ++++ + + + T++ I ++ L ++ ++ Sbjct: 6 IIVSACIMLVAAGAEESAAGPFDFLPEVVATVDSVPIRRDEL--AAQLTLSRQAPPNADR 63 Query: 75 IAVQEL----IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + L + E + I + + + + + Sbjct: 64 AVLARLMRQAVEERIYLDIIRQLLAEQRIVPDEASALAYLKEMNALLPRGIPGVPPAEFA 123 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + + + K + + E+ + + + + + + + Sbjct: 124 RLAAEPQFQLNAALHRYFKQCYPDWVKVDDREVENAYRLDQQRFLLPEKLELGVIEVERS 183 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK---IHDVSIGKAQYLLESDLHPQFQ 247 + + ++ + + + ++ + + + + Sbjct: 184 RDNARETIEDAR----ARLRQGENFDRVAAEVSPDGVKSSAETVMELFRISGAKIP---- 235 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYV 305 + + + + ++ YL Q K+ + + Sbjct: 236 ------VRGVSEVLESGDRFLLLMVRERIPARFVPLKDAAPYLREQLAAAKVGRALELLL 289 Query: 306 KKLRSNAIIHYY 317 ++ + I Y+ Sbjct: 290 RRELARRDIRYF 301 >gi|224097152|ref|XP_002310854.1| predicted protein [Populus trichocarpa] gi|222853757|gb|EEE91304.1| predicted protein [Populus trichocarpa] Length = 122 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 8/75 (10%), Positives = 18/75 (24%), Gaps = 1/75 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 + + E+ K + + + G + F+ Sbjct: 44 AISELKAIREDIVSGKAKFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEETTFSLKVG 103 Query: 256 NTTNPYVTQKGVEYI 270 ++ T GV I Sbjct: 104 EISDIVDTDSGVHII 118 >gi|91215920|ref|ZP_01252889.1| PPIC-type PPIASE domain protein [Psychroflexus torquis ATCC 700755] gi|91185897|gb|EAS72271.1| PPIC-type PPIASE domain protein [Psychroflexus torquis ATCC 700755] Length = 643 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 26/265 (9%), Positives = 82/265 (30%), Gaps = 12/265 (4%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I++G++++ + +++ G I+ L K E + + + + + Sbjct: 102 ISNGEVTEAM----VKEAYGRTRTEVRASHILLNLSKYEEDTAKVYNRALVLMKRAENGE 157 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 L+ ++ ++ G+ ++ + + DV + + Sbjct: 158 DFGMLAKQNSEDPSAQRNEGNLNWFNTFKMVYEFEDVAYKLDVGEISKPVRSDFGYHIIK 217 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDV 229 K + NK + ++ K + + + ++++ Sbjct: 218 KTGERASKGKLKTAHIMVVNKDSLRDPKEQIDKIYVKVK-SGDDFHDLAKQYSDDTDTAS 276 Query: 230 SIGKAQYLLESDLHP---QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286 G L+ + + ++ + T P+ T+ G + + + + +K Sbjct: 277 KGGYVAAFGIGGLNSKTYENEAFQLENIGDYTEPFQTKFGWHIVKLIEVEPIQSFQDIKE 336 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSN 311 L + K V K++ + Sbjct: 337 DLKKRL---KSSSRSKLLVSKIKED 358 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/215 (8%), Positives = 53/215 (24%), Gaps = 8/215 (3%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 N + + EL + + +S V L Sbjct: 19 NAQDSNEVLFEL-DDESYEVGPFVESFQKNSELVASTKEDLEDYLRLYINFRLKIKSAYD 77 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + Y S + + + ++ E + + + + + + Sbjct: 78 QELDTLNSYQKEFSKYYKQIADSYISNGEVTEAMVKEAYGRTRTE-----VRASHILLNL 132 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQ 247 ++ V R + ++ + + G + + +F+ Sbjct: 133 SKYEEDTAKVYNRALVLMKRAENGEDFGMLAKQNSEDPSAQRNEGNLNWFNTFKMVYEFE 192 Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 ++ K + P + G I +R G+ Sbjct: 193 DVAYKLDVGEISKPVRSDFGYHIIKKTGERASKGK 227 >gi|315635433|ref|ZP_07890699.1| conserved hypothetical protein [Arcobacter butzleri JV22] gi|315480191|gb|EFU70858.1| conserved hypothetical protein [Arcobacter butzleri JV22] Length = 274 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 88/282 (31%), Gaps = 29/282 (10%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 +M + + +N E IT DI + + +N + AV LI + L Q +++ I Sbjct: 17 ASMVNGVAILVNEEPITLYDIERTM------VVNKIPKNEAVSYLIDKILYDQLVQEYNI 70 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 T D VN + + A + G+ F + + ++ + F+ I +V+ + Sbjct: 71 TADIFEVNDYIEKLANSNGMDIYAFKAIVKQEYPDYSVFENEAKNTVIRQKLVQKLVKGQ 130 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 E + K +N+ K + S Sbjct: 131 LAIATDED---------------------MQLYYEKNRNKYLTAKTFDVTQYSSTSKEAL 169 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 + +V + E L N+ T + K I K Sbjct: 170 MEVAKNPIIIPSEVQRTSLKLNTEDIQAQLQYLLNGTKVNSFTPIFTANKQYVTFFITKK 229 Query: 276 RDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++KA + + +K+ +Y +K + A I Sbjct: 230 EGTAPLSYESVKARIFNDIMMNREQKYLKDYFEKQKLIADIK 271 >gi|195049626|ref|XP_001992755.1| GH24043 [Drosophila grimshawi] gi|193893596|gb|EDV92462.1| GH24043 [Drosophila grimshawi] Length = 165 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 7/91 (7%), Positives = 18/91 (19%), Gaps = 1/91 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + + R ++ G Sbjct: 71 RPSSWREENITRTKEEAQMLLEIYRNKIVNREATFEELARSYSDCSSAKRGGDLGKFGRG 130 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + F+ ++ T G+ I Sbjct: 131 QMQAPFEKAAFALKVGQLSDIVDTDSGLHII 161 >gi|2739197|gb|AAC49984.1| peptidyl-prolyl cis/trans isomerase [Emericella nidulans] gi|259479663|tpe|CBF70093.1| TPA: Peptidyl-prolyl cis/trans isomerase [Source:UniProtKB/TrEMBL;Acc:O42735] [Aspergillus nidulans FGSC A4] Length = 176 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 8/164 (4%), Positives = 32/164 (19%), Gaps = 1/164 (0%) Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 S F ++++ + + + Sbjct: 10 WEVRHSNSKNLPYYFNPATRESRWEPPADTDMETLKMYMATYHSGAATYHEAPSQEGKIR 69 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + + + E + + + Sbjct: 70 CSHLLVKHRDSRRPSSWREAEITRTKEEAREILRGHQERIMRGEIRLGDLAMSESDCSSA 129 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ +F+ ++ + G+ I Sbjct: 130 RKKGDLGFFGRGEMQKEFEEAAFALQPGQVSDIVESGSGLHLIE 173 >gi|255026336|ref|ZP_05298322.1| hypothetical protein LmonocytFSL_08280 [Listeria monocytogenes FSL J2-003] Length = 247 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 26/247 (10%), Positives = 72/247 (29%), Gaps = 31/247 (12%) Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 VQ+L + + + + + ++ E + + +N Sbjct: 3 NEVVQQLTFKKILEDKYTVTEKEVNAEY------------KKYEEQYGDSFESTLSSNNL 50 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 K + +V+ E ++ A + + +R +L Sbjct: 51 TKTSFKENLEYNLLVQKATEANMDVSESKLKAYYKTW----EPDITVRHIL--------- 97 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK- 251 + K+ + K + +++++ + G ++ F+ Sbjct: 98 --VDDEATAKEIQTKLKNGEKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYA 155 Query: 252 -KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-AQNTPTKIEKHEAEYVKKLR 309 +++++ + + G I + K + G KA + A ++ +KK Sbjct: 156 LENKDDVSGIVKSTYGYHLIQLVKKTEKGTYAKEKANVKAAYIKSQLTSENMTAALKKEL 215 Query: 310 SNAIIHY 316 A I Sbjct: 216 KAANIDI 222 >gi|296825238|ref|XP_002850783.1| peptidyl-prolyl cis-trans isomerase pin4 [Arthroderma otae CBS 113480] gi|238838337|gb|EEQ27999.1| peptidyl-prolyl cis-trans isomerase pin4 [Arthroderma otae CBS 113480] Length = 130 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 27/85 (31%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K +F+ G + + L F+ + + + Sbjct: 47 EKHSKKEEALEKLRSGAKFDEVAREFSED-KARQGGSLGWKVRGSLDAAFEKVAYDLEPS 105 Query: 257 TTN-P----YVTQKGVEYIAICDKR 276 TT P T G I + ++ Sbjct: 106 TTGNPKYVEVKTGFGYHIIMVEGRK 130 >gi|315928902|gb|EFV08160.1| surA N-terminal domain protein [Campylobacter jejuni subsp. jejuni 305] Length = 186 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/186 (13%), Positives = 59/186 (31%), Gaps = 7/186 (3%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 I+ S S + I ++ E IT DI + + LK+ A+ LI Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKALKID------RNKALGVLIN 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 E ++ ++++ GI + ++ + + F + L + F+ Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRTNFKKDL 117 Query: 143 IWPDVVKNDF-MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + + M K + ++ K+ I ++ + + K+ Sbjct: 118 EKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANIYLSNNPQTLENIKNTKK 177 Query: 202 IKDAEE 207 + Sbjct: 178 QSLNHK 183 >gi|88811164|ref|ZP_01126420.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrococcus mobilis Nb-231] gi|88791703|gb|EAR22814.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrococcus mobilis Nb-231] Length = 250 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 31/266 (11%), Positives = 71/266 (26%), Gaps = 27/266 (10%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 I+ E I+ + LKL L ++EL+ E L +++GI + Sbjct: 3 VAKIDEETISA---DGLVKWLKLNGTFDNL----IEELVSEKLTVHAAKRAGINITLEEI 55 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 F Q R GL + +Q + +++ + + + + Sbjct: 56 QERFDQIRRVEGLHRAKDTQEFLQQLGVSLDDFEAYISDTLYKEKMLEEVRR-----DEA 110 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + V+ K + + + Sbjct: 111 IQEYFSLNSPKFEGIEISHIVV-----------DSENKAREILSLAEEEPDMFAELAREH 159 Query: 223 A-SKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKG--VEYIAICDKRDL 278 + + G +L +L + + + S P+ T E + + Sbjct: 160 SLDDDTKHNGGLVGKVLRGELQDEIEAKVFNASAGELLGPFQTPDELFYEIFKVEARHPA 219 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEY 304 + + + +E E+ Sbjct: 220 ILDTETEKEVRRLVYRAWLEARAQEH 245 >gi|189206624|ref|XP_001939646.1| peptidyl-prolyl cis-trans isomerase ssp1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187975739|gb|EDU42365.1| peptidyl-prolyl cis-trans isomerase ssp1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 194 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 16/170 (9%), Positives = 36/170 (21%), Gaps = 3/170 (1%) Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + + + + L K + E +I Sbjct: 22 EVRRSNTKNLPYYFHAQTKDSRWEPPAGTDPERLKTYMAANHSSKGVAPAAFAPTEGKIR 81 Query: 165 --ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 K ++ + + + +IK EE Sbjct: 82 CAHLLVKHRDSRRPASWREPKITRSIEEARELIRNYHAQIKAYEEGGDNAKSLSELATTE 141 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + G + D+ +F+ + ++ T GV I Sbjct: 142 SDCSSARKGGDLGFFGRGDMQKEFEQAAFALEKGQVSDMVETASGVHLIQ 191 >gi|109148909|ref|XP_001119408.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like, partial [Macaca mulatta] Length = 138 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 25/83 (30%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E + +++ G ++ + FQ + Sbjct: 57 KIMEAVEKLKSGMRFNEVASQYSED-KARQGGDLGWMTRGSMVGPFQEAAFALPVSGMEK 115 Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276 T P T+ G I + ++ Sbjct: 116 PVFTDPPVKTKFGDHIIMVEGRK 138 >gi|294898700|ref|XP_002776345.1| peptidylprolyl isomerase, putative [Perkinsus marinus ATCC 50983] gi|239883255|gb|EER08161.1| peptidylprolyl isomerase, putative [Perkinsus marinus ATCC 50983] Length = 84 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 8/69 (11%), Positives = 18/69 (26%), Gaps = 1/69 (1%) Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPY 261 E+ + + + G Y ++ F+ + P Sbjct: 12 YMIEKLKADKSLFPEMAMARSDCGSYKNGGDLGYFDRGEMQRPFEEAAFSLEVGELSGPV 71 Query: 262 VTQKGVEYI 270 T+ GV + Sbjct: 72 ETESGVHVL 80 >gi|237734442|ref|ZP_04564923.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229382262|gb|EEO32353.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 332 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 23/314 (7%), Positives = 85/314 (27%), Gaps = 30/314 (9%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSR--IRTTIN----GEVITDGDISKRIALLKLQKING 70 V+ F + + I ++N + I DI + + Sbjct: 7 AAALVVTSFLLTGCQNSSKTVKEDGKYIVASLNSGKKDKNIFADDIFNDV--ISTASGKS 64 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 +Q+L+ + E ++ + + ++ + + + Sbjct: 65 SYFNAVLQQLMDQKFPIDEDMETDANETVDQIQTYYENQYGDNAETQLQTALSSSGFNSL 124 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 D + + + + ++ +E ++ T +++ + Sbjct: 125 DEYRENMVRVYQRCNFLL----------AYVEKNFDEVFDDYYTQASPREASLIKVSMTD 174 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYL-LESDLHPQFQN 248 ++ + + + ++ + + + GK + S L F + Sbjct: 175 VENPTADETAKLSEVTALLSSSKSFGDIAKDYSDDTNTNKNKGKLGIVDTTSGLSQTFGS 234 Query: 249 LLKKS-----QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 ++ T+ G ++ + + ++K + + + Sbjct: 235 DVETKILALASGETSEAIKGTDGYYFVKVTS----TDKDSIKKEIKKDLSIDTPLIAYDK 290 Query: 304 YVKKL-RSNAIIHY 316 Y+ + + + Y Sbjct: 291 YMSYIVYQSYNVKY 304 >gi|327353064|gb|EGE81921.1| peptidyl-prolyl cis-trans isomerase ssp-1 [Ajellomyces dermatitidis ATCC 18188] Length = 198 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 13/192 (6%), Positives = 39/192 (20%), Gaps = 1/192 (0%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I+ ++ + + ++ + + L + Sbjct: 4 IISDKSNEQCLPHLQDESGLPPGWEVRHSNSKNLPYYFNPTTKESRWEPPADTDTDKLKV 63 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 D G + + + R + + + ++ Sbjct: 64 YMAQHHSGPADRYTLGGAGGGPVEGKIRASHLLIKHRGSRRPSSWRESEITRSKEEALEI 123 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 E R + + G + ++ +F+ + Sbjct: 124 LRGHEERIRAGETTLGDIAMSESDCSSARKKGDLGFFGRGEMQAEFEEAAFALKPGQVSG 183 Query: 260 PYVTQKGVEYIA 271 T GV I Sbjct: 184 IVETASGVHLIE 195 >gi|295657789|ref|XP_002789460.1| hypothetical protein PAAG_08629 [Paracoccidioides brasiliensis Pb01] gi|226283794|gb|EEH39360.1| hypothetical protein PAAG_08629 [Paracoccidioides brasiliensis Pb01] Length = 132 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 26/85 (30%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K +F+ G + + L F+ + + Sbjct: 49 EKHSKKEEALEKLRNGAKFDEVAREFSED-KARQGGSLGWKIRGSLDASFEKAAYDLEPS 107 Query: 257 TTN-P----YVTQKGVEYIAICDKR 276 TT P T G I + ++ Sbjct: 108 TTGNPKWTEVKTGFGYHIIMVEGRK 132 >gi|149199099|ref|ZP_01876139.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase) [Lentisphaera araneosa HTCC2155] gi|149137888|gb|EDM26301.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase) [Lentisphaera araneosa HTCC2155] Length = 92 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 24/77 (31%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 ++ ++ E K+++ G L L P ++ K + N Sbjct: 12 KQKRDAEEILEKLKSGADFAKFARKYSTCNSAKRGGDLGELRPGQLVPAINQIVFKKELN 71 Query: 256 NTTNPYVTQKGVEYIAI 272 P ++ G + + Sbjct: 72 VIHGPVKSKFGFHLVEV 88 >gi|312597019|pdb|2RQS|A Chain A, 3d Structure Of Pin From The Psychrophilic Archeon Cenarcheaum Symbiosum (Cspin) Length = 97 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 19/68 (27%), Gaps = 2/68 (2%) Query: 206 EESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 +E K ++ + G Y + F++ + + P + Sbjct: 27 QERLKAGEKFGKLAKELSIDGGSAKRDGSLGYFGRGKMVKPFEDAAFRLQVGEVSEPVKS 86 Query: 264 QKGVEYIA 271 + G I Sbjct: 87 EFGYHVIK 94 >gi|320586255|gb|EFW98934.1| peptidyl-prolyl cis-trans isomerase [Grosmannia clavigera kw1407] Length = 139 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 6/87 (6%) Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 K+ + + R K + F+ G + + L P F+ + Sbjct: 54 CEKHAKKEEALAKIRSEGAKFDDVARTFSED-KARQGGTLGWKVRGSLDPAFEEVAFALP 112 Query: 255 NNTT-NPY----VTQKGVEYIAICDKR 276 +TT +P T G I + ++ Sbjct: 113 ASTTVSPVVGEAKTSFGYHIIMVEGRK 139 >gi|93140533|sp|Q4I665|PIN4_GIBZE RecName: Full=Peptidyl-prolyl cis-trans isomerase PIN4; Short=PPIase PIN4; AltName: Full=Parvulin-14; Short=Par14 Length = 133 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 29/85 (34%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A K +++ G + + L P+F+ + + + Sbjct: 50 EKHAKKEEALAKLNDGVKFDEVAREYSED-KARQGGSLGWKTKGSLDPKFEEVAFALETS 108 Query: 257 TT-NP----YVTQKGVEYIAICDKR 276 TT +P T G I + ++ Sbjct: 109 TTNSPKFVEVKTGFGYHIIMVEGRK 133 >gi|28870210|ref|NP_792829.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. tomato str. DC3000] gi|213970608|ref|ZP_03398734.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. tomato T1] gi|301386316|ref|ZP_07234734.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. tomato Max13] gi|302060898|ref|ZP_07252439.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. tomato K40] gi|302133972|ref|ZP_07259962.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28853456|gb|AAO56524.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. tomato str. DC3000] gi|213924605|gb|EEB58174.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. tomato T1] gi|330968409|gb|EGH68669.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. actinidiae str. M302091] gi|331015438|gb|EGH95494.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 91 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 6/77 (7%), Positives = 21/77 (27%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + + ++ + +K +S G + + ++ K Sbjct: 11 KTAEEAEQLKQRIAKGEAFDVLAKKHSSCPSGKRGGDLGEVRPGQMVGAIDQVIFKKPLR 70 Query: 257 TT-NPYVTQKGVEYIAI 272 P ++ G + + Sbjct: 71 VVHGPIKSKFGYHLVQV 87 >gi|15227956|ref|NP_179395.1| PIN1AT (PEPTIDYLPROLYL CIS/TRANS ISOMERASE, NIMA-INTERACTING 1); peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gi|38258260|sp|Q9SL42|PIN1_ARATH RecName: Full=Peptidyl-prolyl cis-trans isomerase Pin1; Short=PPIase Pin1; AltName: Full=PIN1At; AltName: Full=Rotamase Pin1 gi|13430812|gb|AAK26028.1|AF360318_1 putative peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gi|4406814|gb|AAD20122.1| putative peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gi|15810551|gb|AAL07163.1| putative peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gi|15982815|gb|AAL09755.1| At2g18040/T27K22.9 [Arabidopsis thaliana] gi|21537274|gb|AAM61615.1| putative peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gi|330251625|gb|AEC06719.1| Peptidyl-prolyl cis-trans isomerase Pin1 [Arabidopsis thaliana] Length = 119 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 8/77 (10%), Positives = 18/77 (23%), Gaps = 1/77 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 V++ E+ + + G + F+ Sbjct: 40 AAVEQLKSIREDIVSGKANFEEVATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKV 99 Query: 255 NNTTNPYVTQKGVEYIA 271 + ++ T GV I Sbjct: 100 GDISDIVDTDSGVHIIK 116 >gi|154250196|ref|YP_001411021.1| hypothetical protein Fnod_1521 [Fervidobacterium nodosum Rt17-B1] gi|154154132|gb|ABS61364.1| hypothetical protein Fnod_1521 [Fervidobacterium nodosum Rt17-B1] Length = 328 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 36/334 (10%), Positives = 89/334 (26%), Gaps = 44/334 (13%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + + VL+I V I +NG IT + ++ + KL Sbjct: 1 MKKVCIFLVLLISFFVF--------AQQEIVAVVNGRSITMDEWNREANVQKLLLEIQNS 52 Query: 73 EK---------------------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 + + LI + Q E + D TV + Sbjct: 53 NETFYQILMTTQEGLVLIEKYKLKVLDTLIRKIAFIQFAESLKVQPDPQTVKNDVDNEIK 112 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 + + + L+ + + Q ++ + + + + + Sbjct: 113 KMLVDLKMTETQLNDYLMQLGMGQLEDFRQKLY--LQRTYSLSLANVYTYYLKNATVSEE 170 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 I + L K + D+ + ++ K + V+ Sbjct: 171 EIKAYYEKNKAKYTVPTQYDLLIFKAKDKAMADSIRQDVAKNISVEEISKKYNLSPHVNG 230 Query: 232 ----GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALK 285 G + + ++ + + S+ + I + D + +K Sbjct: 231 LVTQGDMEKIPQN----LWVIITSVSKGTILPAQLINNEYYIIRVRDVKPGSQKSLDEVK 286 Query: 286 AYLSAQNTPTKIEK---HEAEYVKKLRSNAIIHY 316 + + TK ++ A+ + + I Sbjct: 287 EEIKKELVSTKQKEVKDKVAKDFEDFLKKSKIEI 320 >gi|146077632|ref|XP_001463318.1| PPIase [Leishmania infantum JPCM5] gi|134067402|emb|CAM65675.1| putative PPIase [Leishmania infantum JPCM5] Length = 115 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 20/77 (25%), Gaps = 1/77 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 V + K + + + G ++ F++ K Sbjct: 36 EAVTELQKWRQSIEEGRVTFEEAARQRSDCSSYARGGDLGVFGPGEMMKSFEDATKSLEV 95 Query: 255 NNTTNPYVTQKGVEYIA 271 + + VT GV I Sbjct: 96 GHVSGIVVTDSGVHIIK 112 >gi|297832446|ref|XP_002884105.1| PIN1AT [Arabidopsis lyrata subsp. lyrata] gi|297329945|gb|EFH60364.1| PIN1AT [Arabidopsis lyrata subsp. lyrata] Length = 119 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 8/77 (10%), Positives = 18/77 (23%), Gaps = 1/77 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 V++ E+ + + G + F+ Sbjct: 40 AAVEQLKSIREDIVSGKANFEEVATRVSDCSSAKRGGDLGPFGRGQMQKPFEEATYALKV 99 Query: 255 NNTTNPYVTQKGVEYIA 271 + ++ T GV I Sbjct: 100 GDISDIVDTDSGVHIIK 116 >gi|256819263|ref|YP_003140542.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga ochracea DSM 7271] gi|256580846|gb|ACU91981.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga ochracea DSM 7271] Length = 705 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 26/255 (10%), Positives = 62/255 (24%), Gaps = 17/255 (6%) Query: 51 ITDGDISKRIALLKLQKINGELEKIA------------VQELIVETLKKQEIEKSGITFD 98 +TD +I I + Q I ++ LK + E + Sbjct: 213 VTDSEIQDYIKKHEKQFKQEAYRNIQYIVVSEKPSQTDIETEKESLLKLLQPEVVFNSKT 272 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 + +N + S + + +++ V F + Sbjct: 273 NKNDTIAGFAKTKNIKDFVDRHSDVPYDSTFVNKDNLRSSYADTLFNLPVGKVFGPYEED 332 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 +++ K V+ I ++ AEE + Sbjct: 333 GSLKLSRMIAKQPGGAVKASHILIAYTGSQAATPNTTRTKEEAKAKAEELLAQAKAAGAD 392 Query: 219 LEKFASKIHDVSI-----GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273 + A + + G + + + + + T T G + + Sbjct: 393 FAQLARENSEEPGAVYSAGDLGFFSKGAMVKPLEEFAFNNAVGTIGIVETAFGFHVVKVT 452 Query: 274 DKRDLGGEIALKAYL 288 DK + + + Sbjct: 453 DKAEAVNIATISRKV 467 >gi|253700332|ref|YP_003021521.1| hypothetical protein GM21_1709 [Geobacter sp. M21] gi|251775182|gb|ACT17763.1| conserved hypothetical protein [Geobacter sp. M21] Length = 526 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 41/132 (31%), Gaps = 11/132 (8%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHP--------QF 246 V++++ + + + + K L++ A G Y + + Sbjct: 389 AQVEQKLLEVKGAEVAKKKAEEALQQLAKGGAAAKETGNFGYSPAGAIPTVGTSPELMEA 448 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEY 304 L + P + + + ++ + KA + P K + ++ Sbjct: 449 AFALTPASPVAKQPVKVGERWYAVKLKNRVEAPTTDFAKASATIKQALLPKKQQDELDKW 508 Query: 305 VKKLRSNAIIHY 316 +K LR A I Sbjct: 509 LKGLRDKAKIEI 520 Score = 45.8 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 33/259 (12%), Positives = 67/259 (25%), Gaps = 30/259 (11%) Query: 1 MTSKVF-TSLSDFIKLLTTY----FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD 55 M + S IK++ FV IF + S T++G I+ D Sbjct: 1 MLGIMRKYKQSILIKIVFVVIVLSFVGTIFLVWGRGGEGSADGPGGYAATVDGTKISMDD 60 Query: 56 ISKRIALLKLQ-------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 K + + L+K + ++ L +E +K GI + + V Sbjct: 61 FQKNYYRTRNLYEQIYGRSLTPEMEKQMGLKKTTIGSMVDNVLTLKEAKKMGIKVNKDEV 120 Query: 103 NYF---FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 N + L + F++ + +N K Sbjct: 121 AAEIAKIPSFQNNGAFDFNLYQQTLKANRVTPKEFEETQEQDILVQKA-RNKVKEKATVT 179 Query: 160 EMEIPANKQKMKNI--------TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + ++ +K + + + L N Q + + Sbjct: 180 DADVMQEFKKQNDKVNLQYVSFSPADVKGSIKLTDAELNVYLQDHQAQFKTPEQVSIAYT 239 Query: 212 LPKDCNKLEKFASKIHDVS 230 L K + + Sbjct: 240 LVSPAALAAKVSVTPEEAQ 258 Score = 41.2 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 9/66 (13%), Positives = 22/66 (33%), Gaps = 2/66 (3%) Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHE 301 Q P T KG+ + + DK+ + ++A + + K + Sbjct: 345 ELVTRAFALKQGELGGPVETAKGIYLLQVLDKKPSVVPPLAQVRAQVEQKLLEVKGAEVA 404 Query: 302 AEYVKK 307 + ++ Sbjct: 405 KKKAEE 410 >gi|253997164|ref|YP_003049228.1| EpsD family peptidyl-prolyl cis-trans isomerase [Methylotenera mobilis JLW8] gi|253983843|gb|ACT48701.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Methylotenera mobilis JLW8] Length = 338 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 74/309 (23%), Gaps = 46/309 (14%) Query: 13 IKLLTTYFVLIIFCIVPIVSY--KSWAMSSRIRTTINGEVITDGDISKRIALLK-LQKIN 69 I++ ++ + + + S A +S+ +NG+ IT ++ + + Sbjct: 20 IRMFALVVLVAMALQMTACNKKDNSAARASQTIARVNGDEITVHQVNNELQRANVKPEQQ 79 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 K VQ LI + Q + + + Sbjct: 80 EAAAKQIVQALIDRQVLVQAAIDAKMDRN------------------------------P 109 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT-VLFSIP 188 + Q + + +I K ++ + L Sbjct: 110 RVVQAIESAKAQILAQAYIDEKLSQVAKVTVADIAQYKTTHADVFADRKMYLMDELSLPL 169 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 D V + K E L + K L Sbjct: 170 DAYSAELNAVADKAKSMAEIMQWLDEHGVKYNHQQVAH-----------ASETLPSPLLA 218 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKK 307 L K + ++G I ++ + K + K + +K+ Sbjct: 219 ELSKMKLQDIIFIRARQGNVIAQILQIKNAPAADDDTKKQVEQLIIAEKRKAIIEAEMKR 278 Query: 308 LRSNAIIHY 316 L A + Y Sbjct: 279 LHEAAKVIY 287 >gi|154332458|ref|XP_001562603.1| PPIase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134059493|emb|CAM41720.1| putative peptidyl-prolyl cis-trans isomerase/rotamase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 115 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 8/77 (10%), Positives = 19/77 (24%), Gaps = 1/77 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + + + + + + V G ++ F++ K Sbjct: 36 EAAAELQQWRQSIEDGKMTFEDAARQRSDCGSYVRGGDLGVFGPGEMMKPFEDATKGLEV 95 Query: 255 NNTTNPYVTQKGVEYIA 271 + T GV I Sbjct: 96 GQMSGLVATDSGVHLIK 112 >gi|330875443|gb|EGH09592.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 91 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 6/77 (7%), Positives = 21/77 (27%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + + ++ + +K +S G + + ++ K Sbjct: 11 KTAEEAEQLKQRIAKGEAFDVLAKKHSSCPSGKRGGDLGEVRPGQMVGAMDQVIFKKPLR 70 Query: 257 TT-NPYVTQKGVEYIAI 272 P ++ G + + Sbjct: 71 VVHGPIKSKFGYHLVQV 87 >gi|323157884|gb|EFZ43987.1| chaperone surA domain protein [Escherichia coli EPECa14] Length = 64 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 25/61 (40%), Gaps = 1/61 (1%) Query: 257 TTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + P + G I + D R++ + A K K + A ++++ R++A + Sbjct: 1 MSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVK 60 Query: 316 Y 316 Sbjct: 61 I 61 >gi|146322860|ref|XP_755189.2| peptidyl-prolyl cis/trans isomerase [Aspergillus fumigatus Af293] gi|129558496|gb|EAL93151.2| peptidyl-prolyl cis/trans isomerase [Aspergillus fumigatus Af293] Length = 175 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 8/109 (7%), Positives = 25/109 (22%), Gaps = 1/109 (0%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + R + + + ++ + R + + Sbjct: 66 EGKIRCSHLLIKHRDSRRPSSWREAEITRSKEEAIEILRGHEQRIRSGEVSLGDIAVSES 125 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ +F++ + T GV I Sbjct: 126 DCSSARKKGDLGFFGRGEMQKEFEDAAFALQPGQVSGIVETASGVHLIE 174 >gi|159129278|gb|EDP54392.1| peptidyl-prolyl cis/trans isomerase [Aspergillus fumigatus A1163] Length = 192 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 8/109 (7%), Positives = 25/109 (22%), Gaps = 1/109 (0%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + R + + + ++ + R + + Sbjct: 83 EGKIRCSHLLIKHRDSRRPSSWREAEITRSKEEAIEILRGHEQRIRSGEVSLGDIAVSES 142 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ +F++ + T GV I Sbjct: 143 DCSSARKKGDLGFFGRGEMQKEFEDAAFALQPGQVSGIVETASGVHLIE 191 >gi|326493260|dbj|BAJ85091.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 124 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 6/65 (9%), Positives = 16/65 (24%), Gaps = 1/65 (1%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + + + + G + F++ ++ T+ Sbjct: 56 QILAGRASFADLAAQHSDCSSARRGGDLGTFGRRQMQKPFEDATYALKVGEISDIIDTES 115 Query: 266 GVEYI 270 GV I Sbjct: 116 GVHII 120 >gi|319941329|ref|ZP_08015660.1| hypothetical protein HMPREF9464_00879 [Sutterella wadsworthensis 3_1_45B] gi|319805250|gb|EFW02073.1| hypothetical protein HMPREF9464_00879 [Sutterella wadsworthensis 3_1_45B] Length = 268 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 28/239 (11%), Positives = 58/239 (24%), Gaps = 17/239 (7%) Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + E + + N R + + S + K+G+ + + Sbjct: 37 QQEAVATEAISNNPNPHAAIANPQIEDQVRQMVIEYKVMSQYAKKEGLDKQQAVKDDIER 96 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 ++K+ + K + + + R + I + Sbjct: 97 MTDMVLMKHAVNEYVKKNPVTEKELKDEYQKESDRWGKTEYRVRHILVKTQDEAKQI--- 153 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE----SDLHPQFQNLLKKSQNNT 257 ++ EK + G + L L K + Sbjct: 154 ---IDQINKGASFAKIAAEKSLDEESKDRGGILDWTSASVFTGQLSSAIMGLKKGEMDKV 210 Query: 258 TNPYVTQKGVEYIAICDKRDL---GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 P + G + + D R A K L K++ E V LR+ Sbjct: 211 --PVQSPAGFHVVKVEDVRPAELYPKYEARKEELRHILLQRKVQAFIHEQV--LRAEVK 265 >gi|225682401|gb|EEH20685.1| predicted protein [Paracoccidioides brasiliensis Pb03] gi|226289798|gb|EEH45282.1| predicted protein [Paracoccidioides brasiliensis Pb18] Length = 127 Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 26/85 (30%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K +F+ G + + L F+ + + Sbjct: 44 EKHSKKEEALEKLRNGAKFDEVAREFSED-KARQGGSLGWKIRGSLDASFEKAAYDLEPS 102 Query: 257 TTN-P----YVTQKGVEYIAICDKR 276 TT P T G I + ++ Sbjct: 103 TTGNPKWTEVKTGFGYHIIMVEGRK 127 >gi|218261354|ref|ZP_03476208.1| hypothetical protein PRABACTJOHN_01874 [Parabacteroides johnsonii DSM 18315] gi|218224075|gb|EEC96725.1| hypothetical protein PRABACTJOHN_01874 [Parabacteroides johnsonii DSM 18315] Length = 470 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 21/210 (10%), Positives = 52/210 (24%), Gaps = 6/210 (2%) Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 K ++ + +K ++ D + + S + + I Sbjct: 7 NQRKELFKQKEGKVIKYIAVDIRPSKEDYDKASAEIEALKSELATSEKVADLVTENSEIP 66 Query: 131 DNH-FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 F A+ VK + E + V + Sbjct: 67 YMDAFFTENALDPEMKQFVKTANVGDVYGPVFENDKYRLFKLVDKTVAPDSVKVSHIMLA 126 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD----LHPQ 245 N K + +++++ G+ + E+ ++ Sbjct: 127 NTGDEAAIKAKADSL-LNVLKKGGDFAALAKEYSADQAAEKGGELGWFTEATALRGVNDD 185 Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 F+ + + N + + G I + DK Sbjct: 186 FKKAVFSTPVNDYSIVKSLYGTHIIKVTDK 215 >gi|170059343|ref|XP_001865322.1| dodo [Culex quinquefasciatus] gi|167878150|gb|EDS41533.1| dodo [Culex quinquefasciatus] Length = 159 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 9/106 (8%), Positives = 25/106 (23%), Gaps = 1/106 (0%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 Q + R + + + ++ + +K++ Sbjct: 50 EVQCAHLLVKHRDSRRPGSWREENITRSKSEALLILEGYRKQIQSGEATLPELAQKYSDC 109 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 G + F++ + ++ T GV I Sbjct: 110 SSAKRGGDLGMFKRGMMQKPFEDAAFALKVGDMSDVVDTDSGVHLI 155 >gi|330752745|emb|CBL88208.1| peptidyl-prolyl cis-trans isomerase [uncultured Leeuwenhoekiella sp.] Length = 706 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 1/112 (0%) Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 + A + K +F++ G Y + F + + Sbjct: 370 SKTEAKKLADSLASVIKGSASKLAELAPQFSADGSKEKGGDLGYATKGRYVKPFNDFIFN 429 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAE 303 +Q G I I D+++ I L + + I + Sbjct: 430 GSTGEVGVVESQYGYHVIRIDDQKNKQRAIKLATVAKEIEPSQETINEVFNA 481 Score = 43.9 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 26/246 (10%), Positives = 62/246 (25%), Gaps = 17/246 (6%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----IS 57 +K+ I ++ + V S S RI ++N E I + + Sbjct: 4 LNKIRQRSVFLIAIIALALFAFVLADVLKNGGFSTEKSQRILGSVNDEDIEQQEFAGLVD 63 Query: 58 KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 + A + A ++ + L ++ + GIT + + +N + +N Sbjct: 64 SQTARYGAGITTTQAVNAAWEQEVRRILLDEQYDDLGITVEQDRINDLLKEALQNDPNFQ 123 Query: 118 EDFSSFLD-------------KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 D + + + + E Sbjct: 124 NDGVFSEQKLREYVATLKSTNPTMYAQWVDYEKQLANNEQQQIYFSLVKAGLNTSFKEGQ 183 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + N+ EY+ D ++ + I+ + + F+ Sbjct: 184 MAYELENNLRDLEYVQIPYASISDDKVSVSKEDISNYIEKHKADFKSEASRNLRYVMFSE 243 Query: 225 KIHDVS 230 Sbjct: 244 SASATD 249 Score = 43.1 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 19/263 (7%), Positives = 72/263 (27%), Gaps = 4/263 (1%) Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 + + ++ + + ++ A++ V + E F++ T V +N+ Sbjct: 438 VESQYGYHVIRIDDQKNKQRAIKLATVAKEIEPSQETINEVFNATTKFQMAVSEDKNSFE 497 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 ++ + + L Q ++++ F +++ + + Sbjct: 498 KVAKSENYTVRPVNSIKALDETLPGQGSQREIIRWAFNEDTKTGDVQRFNVDGGYLVVQL 557 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA- 234 + ++ + ++ + + ++ + + Sbjct: 558 TSKTEKGLMPVDQASPRVTPIIRNEKKAELIKKQISGKDLNAIASANNVSVQTANGVNLK 617 Query: 235 --QYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292 + +NP KGV + + + ++ +N Sbjct: 618 NPTLAGAGTEPKVMGVAFGLDKGAVSNPIAGDKGVYVVKVTNVTPARKLDNYASFAMQKN 677 Query: 293 TPTKIEKHEAEYVKKLRSNAIIH 315 + + ++ L+ A I Sbjct: 678 NADRANVNVV-LLQALKDAADIE 699 >gi|325117413|emb|CBZ52965.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Neospora caninum Liverpool] Length = 224 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 5/60 (8%), Positives = 15/60 (25%), Gaps = 1/60 (1%) Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 +++ G + + F++ ++ T G+ I Sbjct: 54 ENFAQLANQYSDCGSFQKGGDLGFFTRGMMQKPFEDASFALQVGEISDIVDTDSGLHLIY 113 >gi|71734207|ref|YP_274523.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. phaseolicola 1448A] gi|257484583|ref|ZP_05638624.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. tabaci ATCC 11528] gi|298486848|ref|ZP_07004904.1| Peptidyl-prolyl cis-trans isomerase ppiC [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|302189916|ref|ZP_07266589.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. syringae 642] gi|71554760|gb|AAZ33971.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. phaseolicola 1448A] gi|298158715|gb|EFH99779.1| Peptidyl-prolyl cis-trans isomerase ppiC [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320324315|gb|EFW80394.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. glycinea str. B076] gi|320328562|gb|EFW84564.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. glycinea str. race 4] gi|330885577|gb|EGH19726.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. glycinea str. race 4] gi|330890135|gb|EGH22796.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. mori str. 301020] gi|330901181|gb|EGH32600.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. japonica str. M301072PT] gi|330944620|gb|EGH46570.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. pisi str. 1704B] gi|330980410|gb|EGH78513.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. aptata str. DSM 50252] gi|330988820|gb|EGH86923.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008130|gb|EGH88187.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 91 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 6/77 (7%), Positives = 20/77 (25%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + + + + +K +S G + + ++ K Sbjct: 11 KTAEEAEQLKLRIAKGEAFDVLAKKHSSCPSGKRGGDLGEVRPGQMVGAIDQVIFKKPLR 70 Query: 257 TT-NPYVTQKGVEYIAI 272 P ++ G + + Sbjct: 71 VVHGPIKSKFGYHLVQV 87 >gi|331249905|ref|XP_003337566.1| ESS1 protein [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309316556|gb|EFP93147.1| ESS1 protein [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 170 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 10/166 (6%), Positives = 34/166 (20%), Gaps = 4/166 (2%) Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 A+ + + ++ + E Sbjct: 1 MAQAHDWEYFYSNQLKKSCWDRPTEITPEEVEKLPGAHLLHGAVTSQGLGGATEKVRASH 60 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQ---KRIKDAEESRLRLPKDCNKLEKFASK 225 + +I K + ++ ++ + + + + Sbjct: 61 LLVKHAQSRRPASWKEANITRTKEEAIEILKGYQSKLSEIGDKAELAEQFAELASAHSDC 120 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYI 270 + G + F++ + + T+ GV I Sbjct: 121 SSHANGGDLGLFGRGQMQKPFEDATYALGIHELSPIVDTESGVHLI 166 >gi|261190124|ref|XP_002621472.1| peptidyl-prolyl cis-trans isomerase ssp-1 [Ajellomyces dermatitidis SLH14081] gi|239591300|gb|EEQ73881.1| peptidyl-prolyl cis-trans isomerase ssp-1 [Ajellomyces dermatitidis SLH14081] gi|239606360|gb|EEQ83347.1| peptidyl-prolyl cis-trans isomerase [Ajellomyces dermatitidis ER-3] Length = 181 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 12/168 (7%), Positives = 34/168 (20%), Gaps = 1/168 (0%) Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + ++ + + L + D G + Sbjct: 11 EVRHSNSKNLPYYFNPTTKESRWEPPADTDTDKLKVYMAQHHSGPADRYTLGGAGGGPVE 70 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + + R + + + ++ E R + + Sbjct: 71 GKIRASHLLIKHRGSRRPSSWRESEITRSKEEALEILRGHEERIRAGETTLGDIAMSESD 130 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ +F+ + T GV I Sbjct: 131 CSSARKKGDLGFFGRGEMQAEFEEAAFALKPGQVSGIVETASGVHLIE 178 >gi|157736302|ref|YP_001488985.1| hypothetical protein Abu_0031 [Arcobacter butzleri RM4018] gi|157698156|gb|ABV66316.1| conserved hypothetical protein [Arcobacter butzleri RM4018] Length = 274 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 88/282 (31%), Gaps = 29/282 (10%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 +M + + +N E IT DI + + +N + AV LI + L Q +++ I Sbjct: 17 ASMVNGVAILVNEEPITLYDIERTM------VVNKIPKNEAVSYLIDKILYDQLVQEYNI 70 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 T D VN + + A + G+ F + + ++ + F+ I +V+ + Sbjct: 71 TADIFEVNDYIEKLANSNGMDIYAFKAIIKQEYPDYSVFENEAKNTVIRQKLVQKLVKGQ 130 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 E + K +N+ K + S Sbjct: 131 LAIATDED---------------------MQLYYEKNRNKYLTAKTFDVTQYSSTSKEAL 169 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 + +V + E L N+ T + K I K Sbjct: 170 MEVAKNPIIIPSEVQRTSLKLNTEDIQAQLQYLLNGTKVNSFTPIFTANKQYVTFFITKK 229 Query: 276 RDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++KA + + +K+ +Y +K + A I Sbjct: 230 EGTAPLSYESVKARIFNDIMMNREQKYLKDYFEKQKLIADIK 271 >gi|254883668|ref|ZP_05256378.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 4_3_47FAA] gi|319642194|ref|ZP_07996854.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_40A] gi|254836461|gb|EET16770.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 4_3_47FAA] gi|317386180|gb|EFV67099.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_40A] Length = 446 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 13/175 (7%), Positives = 45/175 (25%), Gaps = 4/175 (2%) Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 D + +++ + Q + + +++ Sbjct: 68 YAHDMGIDTLSVFRRQVDWYRGKLLRTYLADAEKEEQAARRLYLQGEQRLQANDWIKIAH 127 Query: 184 LFSIPDNKLQNQGF--VQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLES 240 + Q V++++ E+ +++ G ++ + Sbjct: 128 ISKYLSQNASRQEEMRVRQQMDSVYEALWEGADFATLARRYSDDEACKNVGGVLPWMPVN 187 Query: 241 -DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 ++ L +N + P+ + G+ + D+R + L Sbjct: 188 KNMQEWIDKLESLERNKISAPFYSPMGIHIVKWIDRRQGVSFEEKREQLLNYLEK 242 >gi|330958452|gb|EGH58712.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. maculicola str. ES4326] Length = 91 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 6/77 (7%), Positives = 21/77 (27%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + + ++ + +K +S G + + ++ K Sbjct: 11 KTAEEAEQLKQRIAKGEAFDVLAKKHSSCPSGKRGGDLGEVRPGQMVGAIDQIIFKKPLR 70 Query: 257 TT-NPYVTQKGVEYIAI 272 P ++ G + + Sbjct: 71 VVHGPVKSKFGYHLVQV 87 >gi|325568277|ref|ZP_08144644.1| peptidyl-prolyl cis-trans isomerase [Enterococcus casseliflavus ATCC 12755] gi|325158046|gb|EGC70199.1| peptidyl-prolyl cis-trans isomerase [Enterococcus casseliflavus ATCC 12755] Length = 344 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 31/293 (10%), Positives = 70/293 (23%), Gaps = 37/293 (12%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L+ + + + + SS T+ G IT D + + Sbjct: 1 MKKKLILVAVSAMSLFALAACGNSSEEIATMKGGKITVQDFYDKAK-------TSTENQQ 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A++E+I + K EK G ++ F A G S S+ + Sbjct: 54 ALREMI---VLKVFNEKYGDDVTEEMIDEQFNNVAEQYGGSDSFESTLTAS-----GYTV 105 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + ++ + ++ + + Sbjct: 106 KSYRAELKQQLALREGLKANMDITDEDMKTAWDSFHPEVEAQIIKVAS------------ 153 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL--LKKS 253 + E + EK G ++ S P Sbjct: 154 -EDDAKDVLEEAKKDDADFGEIAKEKSTDAATKEDGGTIKFDSTSSAVPSEVKTAAFDLK 212 Query: 254 QNNTTNPYVTQKG------VEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK 299 + + + +D G ++ K L+ T + Sbjct: 213 DGEISEVISATNTSTYTTEYYIVKMVKNQDKGNDMDKYKDELTEIAQNTLLND 265 >gi|156845787|ref|XP_001645783.1| hypothetical protein Kpol_1010p41 [Vanderwaltozyma polyspora DSM 70294] gi|156116451|gb|EDO17925.1| hypothetical protein Kpol_1010p41 [Vanderwaltozyma polyspora DSM 70294] Length = 164 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 12/104 (11%), Positives = 32/104 (30%), Gaps = 1/104 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + + R D + + +++ E+ + ++ + Sbjct: 58 CLHLLIKHKESRRPASHRSEDITISKEEAIEELKGYQEKLKNDPTLFEELAKERSDCSSF 117 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G Y + ++ P F+ K N ++ + GV I Sbjct: 118 KRGGDLGYFGKGEMQPSFEKAAFKLKINEISDIVESDSGVHLIK 161 >gi|258574209|ref|XP_002541286.1| peptidyl-prolyl cis-trans isomerase ssp-1 [Uncinocarpus reesii 1704] gi|237901552|gb|EEP75953.1| peptidyl-prolyl cis-trans isomerase ssp-1 [Uncinocarpus reesii 1704] Length = 440 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 8/115 (6%), Positives = 25/115 (21%), Gaps = 1/115 (0%) Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + + + R + + + ++ + + Sbjct: 13 PSASQKEGQIRASHLLIKHRDSRRPTSWREANITRTKEEAIEILNGHLKRIMAGEATLGD 72 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + G + + +F++ + TQ GV I Sbjct: 73 IATTESDCSSARKKGDLGFFTHGVMQKEFEDASFALKPGQISGIVETQSGVHLIE 127 >gi|212532779|ref|XP_002146546.1| peptidyl-prolyl cis/trans isomerase [Penicillium marneffei ATCC 18224] gi|210071910|gb|EEA25999.1| peptidyl-prolyl cis/trans isomerase [Penicillium marneffei ATCC 18224] Length = 191 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 8/110 (7%), Positives = 26/110 (23%), Gaps = 1/110 (0%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + R + + ++ + + + + Sbjct: 63 AEGKIRCAHLLVKHRDSRRPSSWRESTITRTKEEAIEILRGHEQRIKSGEVRLADLAVSE 122 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + G + ++ +F+ ++ TQ GV I Sbjct: 123 SDCSSARKKGDLGFFGHGEMQKEFEEAAFALQPGEVSSIVETQSGVHLIE 172 >gi|195999062|ref|XP_002109399.1| hypothetical protein TRIADDRAFT_21648 [Trichoplax adhaerens] gi|190587523|gb|EDV27565.1| hypothetical protein TRIADDRAFT_21648 [Trichoplax adhaerens] Length = 153 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 7/108 (6%), Positives = 24/108 (22%), Gaps = 1/108 (0%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + R + + ++ + ++ + + Sbjct: 42 EDKVRASHLLVKHNESRRPSSWRQNEITRSKDDALKLIQEYRKKIVGGEITLGQLALEMS 101 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 G + + F++ + P T G+ I Sbjct: 102 DCSSARKEGDLGFFGRGQMQKPFEDATYALQIGELSEPVFTDSGIHII 149 >gi|289620047|emb|CBI53491.1| unnamed protein product [Sordaria macrospora] Length = 130 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 27/81 (33%), Gaps = 6/81 (7%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260 + ++A +++ + G + + L P+F+ + + +TT Sbjct: 51 KKEEALAKIRDGADFGAVAREYSED-KARTGGSLGWKQKGTLDPEFERVAFALETSTTGK 109 Query: 261 -----YVTQKGVEYIAICDKR 276 T G I + K+ Sbjct: 110 PQIGEAKTPFGYHIIMVEGKK 130 >gi|120437303|ref|YP_862989.1| PpiC-type secreted peptidyl-prolyl cis-trans isomerase [Gramella forsetii KT0803] gi|117579453|emb|CAL67922.1| PpiC-type secreted peptidyl-prolyl cis-trans isomerase [Gramella forsetii KT0803] Length = 706 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 28/278 (10%), Positives = 59/278 (21%), Gaps = 20/278 (7%) Query: 50 VITDGDISKRIALLKLQKINGELEK----------------IAVQELIVETLKKQEIEKS 93 +T DI + + A + L ++ E + Sbjct: 212 EVTKSDIKSYLDNHSSRFETEASRSLQYVIFEESASGDDKTEAKETLNSLRNQRVEYNAA 271 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 D+ +A G +++ K + + Sbjct: 272 VGANDTLAGFDNTDDYATFVGNNSDLPFENRFKFRNDFSGNNAEAIFSLNEGETYGPYEE 331 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 Y L I + + A + Sbjct: 332 NGYWKLSKVIQTKNIPDSVKASHILVTYQGSQLGAGVSRSKEEAQVLADSIAGVVKGDNA 391 Query: 214 KDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 K +F+ + G Y + + P F N + + T G I+I Sbjct: 392 KFAELASEFSADGSNKEQGGDLGYFVPGTMIPAFDNYVFDNSTGDVGVVETPLGYHVISI 451 Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 D+ + + + EK ++ Sbjct: 452 DDQTEAARAVKVATIAKEI---QASEKTMNNLFNEVTK 486 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 24/201 (11%), Positives = 49/201 (24%), Gaps = 7/201 (3%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 +K+ I ++ + V + S T+NG I + ++ + Sbjct: 4 LNKIRQRSVFLIIIIALALFSFVLADVIRNGGMASQSSQNTIATVNGNEIGREEFAREVE 63 Query: 62 LLKLQKINGELEKIAVQELIVET----LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 + N AV + + + ++E+EK GI V N Sbjct: 64 AFERNMGNNMSTTQAVNRIWEQKLRQVILEEEVEKLGIRAGEAQVTQLVRTQMANNPNFT 123 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 + F + + + + Q+ F + Sbjct: 124 NEAGMFDENRLREYVANLKETSPQAYEQW---QQFTSNLAETAKMNSYYNMVGAGVGATL 180 Query: 178 YLIRTVLFSIPDNKLQNQGFV 198 DN V Sbjct: 181 IEGEQAYRLQNDNINMKFVQV 201 Score = 39.3 bits (89), Expect = 0.85, Method: Composition-based stats. Identities = 14/176 (7%), Positives = 45/176 (25%), Gaps = 4/176 (2%) Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 V++ F + ++ + + ++ + +++ Sbjct: 525 AQRRVIQWAFEDEAKVGDVRRFETNNGYVVAQLTSKRDKGLMSVEEASGEVTPILRKEKK 584 Query: 203 KDAEESRLRLPKDCNKLEKF---ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 + RL+ V++ + + ++ Sbjct: 585 AKLIKDRLKGSSLQEIANNQGVSVQNADAVNLSSPTLAGAGEEPEVVGAVFSLEPGKVSS 644 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 P +KGV + K + + K + ++ + + L+ A I Sbjct: 645 PIAGEKGVYVAELVSKFEAPTMDSYKGFAQQESAARRAQATMRI-FDALKKKAEIE 699 >gi|312217546|emb|CBX97494.1| hypothetical protein [Leptosphaeria maculans] Length = 258 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 12/172 (6%), Positives = 32/172 (18%), Gaps = 5/172 (2%) Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + S+ + + L K + + +I Sbjct: 13 EVRRSNTKNLPYYFQASTKDSRWEPPAGTDPEKLKQYMAIHHSSKGVAPAAFQPTKDKIR 72 Query: 165 ANK----QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + +L Q + + Sbjct: 73 CAHLLVKHADSRRPASWREPKITRTKAEAIELIEGYQRQIQAYEQGTDDPNAKSLSELAT 132 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + G + D+ +F+ + + + T G+ I Sbjct: 133 TESDCSSARKGGDLGFFGRGDMQREFEEAAFRLEKGQVSEIVDTASGIHLIQ 184 >gi|255534296|ref|YP_003094667.1| Peptidyl-prolyl cis-trans isomerase [Flavobacteriaceae bacterium 3519-10] gi|255340492|gb|ACU06605.1| Peptidyl-prolyl cis-trans isomerase [Flavobacteriaceae bacterium 3519-10] Length = 716 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 31/266 (11%), Positives = 73/266 (27%), Gaps = 12/266 (4%) Query: 47 NGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 N +T D++ I + I + Q+ + + Sbjct: 212 NPVKVTTQDLADYIKKHPILFKRDASRNIGL-VYFPAAASPQDEAVTQAEINKLFAQGTE 270 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS---IWPDVVKNDFMLKYGNLEMEI 163 + + + + S F+ + + + A Q I V +G + + Sbjct: 271 MSGGKENFQNTTNDSMFVSLNSDLPFNPQYFSAEQLPVSIKDKVAAASVGTTFGPYKEQN 330 Query: 164 PANKQKMKNITVREYLIRTVLFSIPD------NKLQNQGFVQKRIKDAEESRLRLPKDCN 217 K+ + + + + N+ +++ +K P+ Sbjct: 331 FYVVSKLLDKKPSDSTLSRHILVSYKGNQAGGNETRSKEEAKKLADSIGAVLKSAPQKFT 390 Query: 218 KLEKFASKI-HDVSIGKAQYLLESD-LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 + K+++ G + + PQ+ + L + T T G I I DK Sbjct: 391 EFLKYSADPGSAGQGGSVGWTTPATPFVPQYLSFLANNGKGATGVVETDYGYHIINIEDK 450 Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHE 301 + + + K E Sbjct: 451 KTGAMTYKVANLVKTIKASDKTENEV 476 Score = 38.9 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 27/199 (13%), Positives = 68/199 (34%), Gaps = 9/199 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + ++ + ++ + F + P + + + +NGE IT + ++ Sbjct: 3 ILGQIRNRPWLLMGIIAVAMLA--FVVNPDSLEQLFGAKPGVYGKVNGEEITKEEYDDQL 60 Query: 61 ALLKLQKINGE-----LEKIAVQELIVETLKKQEIEKSGITF--DSNTVNYFFVQHARNT 113 +L+ Q L++ A Q ++ L KQ+ +K G+T D F Sbjct: 61 FMLQQQAQQQGQPATGLDEQAWQMMVQSKLIKQQFDKMGLTLTEDMFWNQLQFDPMFAQN 120 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 + + +F ++ Q ++ + ++ ++Y + ++ AN Sbjct: 121 QENFDAKGNFKGQEIKKQIAELQTSGNVEMYNNWLRTRRTIEYRMMARQVFANVSTGITA 180 Query: 174 TVREYLIRTVLFSIPDNKL 192 + +E N Sbjct: 181 SKKEAEEMMKQRDQVANID 199 >gi|34556675|ref|NP_906490.1| hypothetical protein WS0233 [Wolinella succinogenes DSM 1740] gi|34482389|emb|CAE09390.1| conserved hypothetical protein [Wolinella succinogenes] Length = 485 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 40/368 (10%), Positives = 94/368 (25%), Gaps = 74/368 (20%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------- 63 I + + + V +Y + S + IT ++ + A L Sbjct: 14 ITIWISVIAFVGAGFVGWGAYSFSSSS-SWVAKVGETKITQTELEQEYARLYEFYNKIVG 72 Query: 64 ----KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT---GLS 116 K Q +EK A+ LI +TL + G+ V V+ Sbjct: 73 GSLDKEQAKALGIEKQALDSLISKTLMLNFAKDVGLRVSDEEVAKAVVKMEAFHVEGKFD 132 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV---------------------VKNDFML- 154 + + L++ F++ L + + +++ + Sbjct: 133 DKTYRKVLEENHYKPAAFERALHDSLLLEKLGVILTPSVTELEKESLGAAFYIQDKLSIK 192 Query: 155 -------KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 K + E+ + + +++ + + + + ++++ K D+ + Sbjct: 193 TLSSTSLKPVVSDEEVKSFWGENQDVYMTDRVYDIIYSLSKNDEISASDEELKIHYDSFK 252 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGK--------------------------AQYLLESD 241 + + A + E+ Sbjct: 253 NNYLGLDGRPLEFELARTRVEKDYKDAQAEKNALKTYIEFKKSPTPEGTRYSLAESDETL 312 Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTPTKIEK 299 L + T P + +G I + ++ A K K Sbjct: 313 GDELLYRLSEAKVGETLKPVPSPEGYLTIKLMGIKESEPMKFEAAKELARNDLLAQKKRD 372 Query: 300 HEAEYVKK 307 E KK Sbjct: 373 LLEEMAKK 380 >gi|195062884|ref|XP_001996270.1| GH22285 [Drosophila grimshawi] gi|193899765|gb|EDV98631.1| GH22285 [Drosophila grimshawi] Length = 130 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 26/87 (29%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------L 249 Q +I +A + K ++ G + + + FQ+ Sbjct: 45 EKQGKIMEAMDKLKAGQKFPEVATAYSED-KARQGGDLGWQIRGAMVGPFQDAAFALPIS 103 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKR 276 + T P T+ G I + K+ Sbjct: 104 NVNNPIYTDPPIKTKFGYHIIMVEGKK 130 >gi|313241741|emb|CBY33960.1| unnamed protein product [Oikopleura dioica] Length = 142 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 26/87 (29%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q ++ +A ++ S G +LL + FQ + + Sbjct: 57 EKQSKVLEAMGKLKEGQAFNTVATNYSED-KARSGGSLGWLLRGTMVGPFQEAAFQLPIS 115 Query: 257 TT-------NPYVTQKGVEYIAICDKR 276 T P T+ G I I K+ Sbjct: 116 TCSNPSYTDPPVKTKFGYHIIMIEGKK 142 >gi|210620774|ref|ZP_03292241.1| hypothetical protein CLOHIR_00184 [Clostridium hiranonis DSM 13275] gi|210155168|gb|EEA86174.1| hypothetical protein CLOHIR_00184 [Clostridium hiranonis DSM 13275] Length = 339 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 37/328 (11%), Positives = 88/328 (26%), Gaps = 23/328 (7%) Query: 2 TSKVFTSLSDFIKLLT-----------TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEV 50 +F+ + +I L F+ +++ + + S I I+GE Sbjct: 3 NKNIFSKIKKYISKLLDSTLLIVIALLLIFLTMLYVYIRPIDSNIKNDSKEIVAYIDGEK 62 Query: 51 ITDGDISKRIALLKLQKINGELEKI----AVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 + ++ KR N +E + +ELI + + + + + + Sbjct: 63 LRFNEVEKRAEETFYIDKNNTIENLGSDTYKKELIKYVVYEDILYRKAKEENIHVTKQEI 122 Query: 107 VQHA-RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 F+ + K L K + E A Sbjct: 123 EDTYCSVEKFITSKFNLDDAEFKNKYADDKNKLVKSMRKSIKAYKYLDEKTRVSDSEARA 182 Query: 166 NKQKMKNITVREYLIRTVLFSIPDN----KLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 K+ + ++ + + + R + K + ++ Sbjct: 183 YYDAHKDKFREGVYRDIFISTVDSSGKKLSKEEIDNAENRANEIYRKLEEGCKFEDLEDE 242 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLG 279 ++ I G L S + +N + + P + G I + Sbjct: 243 YSEDIEGTIPGGLGDLEMSFTDQKLRNKISTLKVGECIEKPLRSAYGYHIIKRVGTEE-E 301 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKK 307 +K + + + K K +K+ Sbjct: 302 PFDKVKEEIKSMLSYKKQIKLIESLMKE 329 >gi|159042823|ref|YP_001531617.1| hypothetical protein Dshi_0267 [Dinoroseobacter shibae DFL 12] gi|157910583|gb|ABV92016.1| hypothetical protein Dshi_0267 [Dinoroseobacter shibae DFL 12] Length = 449 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 29/294 (9%), Positives = 71/294 (24%), Gaps = 59/294 (20%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 ++ V + A+S + T+N IT+G + L I EL + L Sbjct: 12 IIAPLLCWLAVLAAAPALSRDVLATVNRVEITEGHFEMFLRGLPRDYIRAELRPALLAHL 71 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I + + A + ++ Sbjct: 72 IDQQVL-----------------------AERMAPRFDPDGYYIRL------------RQ 96 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + + F + + + + + + TV + Q Sbjct: 97 AKVAEAYLGARFDAISVSEDDLVDMYLKTYGRLA---WFDLTVATLPKRDAAQAFAQRVA 153 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTN 259 K E+ + + E +L +L + ++ Sbjct: 154 LGKSFAEAAREAGAEASLFEA-------------DWLRRKELDPAILRAAAVLHSGGVSD 200 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 P ++ G + ++ L+ + ++ LR+ + Sbjct: 201 PVRSRSGWHVVRADMIWHAPPFFGVRDELTKL-------ARFEQVLEALRTQSD 247 >gi|58337850|ref|YP_194435.1| peptidylprolyl isomerase [Lactobacillus acidophilus NCFM] gi|58255167|gb|AAV43404.1| PrtM precursor [Lactobacillus acidophilus NCFM] Length = 300 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/290 (8%), Positives = 72/290 (24%), Gaps = 39/290 (13%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91 + S + S+ + G IT + + K + +I+ +Q+ Sbjct: 22 AACSNSGSNSTVASYKGGKITQQQYYDEMK-------KSQAGKSTLANMIINRALEQQYG 74 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 K + + + + + S + + + Sbjct: 75 KYVSSKKVD----------KQYNNYKKQYGSQFSAVLQQNGMTASSFKENLKTNLLSEQA 124 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + + ++ +L + +D + Sbjct: 125 LKHIKKITKKQEQQAW----KSYQPKVTVQHIL-----------VAKKSTAQDIIKQLKD 169 Query: 212 LPKDCNKLEKFA-SKIHDVSIGKAQYL--LESDLHPQFQNLLKK-SQNNT-TNPYVTQKG 266 + +K++ GK ++ L F+ K + P +Q G Sbjct: 170 GKSFSSLAKKYSLDTATKNKAGKLPSFDSTDNTLDSAFKTAAFKLKTGEVTSTPVKSQSG 229 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314 I + + G K + + + + + + + A + Sbjct: 230 YHVIKMINHPAKGKFADHKKAIDDEIYASMAQDQSTMKDVIATVLKRADV 279 >gi|322419880|ref|YP_004199103.1| hypothetical protein GM18_2369 [Geobacter sp. M18] gi|320126267|gb|ADW13827.1| hypothetical protein GM18_2369 [Geobacter sp. M18] Length = 525 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 38/130 (29%), Gaps = 10/130 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP--------QFQN 248 V+ + + + + L K L++ A G Y + + Sbjct: 389 AVEAKAVEVKAADLAKKKAEEALQQLAKGAAAKETGSFGYAATGAVPTIGTSPELMEAAF 448 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEYVK 306 L P+ + + + + K + A P K ++ ++VK Sbjct: 449 ALNAPNEAAKQPFKVGDRWYAVKLKSRTEAPLTDLAKDSGTIKAALLPKKQQEALDKWVK 508 Query: 307 KLRSNAIIHY 316 LR A I Sbjct: 509 GLRDKAKIDI 518 Score = 38.5 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 30/237 (12%), Positives = 62/237 (26%), Gaps = 26/237 (10%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-------------ALLK 64 F+ IF + S T+NG I+ + K +L Sbjct: 23 LSFIGTIFLVWGKGGSDGQGGKSY-AATVNGTKISLDEFQKSYYRTRGLYEQIYGRSLTP 81 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFS 121 + ++K+ + L+ L E +K G+ V +N + Sbjct: 82 EMEKQMGIKKLTINSLVDNVLIHAEAKKMGLKASKEEVAAEIAKIPAFQKNGAFDFGIYQ 141 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI-------- 173 L I F++ + + +N + E+ A +K K+ Sbjct: 142 QTLKANRITPKDFEESQEQEMLLQKA-RNKVKDAAAVTDAEVKAAFKKQKDKIDLAYVSF 200 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 + + L + + + L K + +V Sbjct: 201 SPADVKGSIKLTDQELTSYLQDHQNEFKTPEQVSVAYALVSPAQFAAKVSVTPEEVQ 257 Score = 38.1 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 81/280 (28%), Gaps = 28/280 (10%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 IT D + L + K A + + K +K D V++ Sbjct: 149 ITPKDFEESQEQEMLLQKARNKVKDA--AAVTDAEVKAAFKKQKDKIDLAYVSFSPADVK 206 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + L+ ++ +S+L +Q ++ F K E+ QK Sbjct: 207 GSIKLTDQELTSYLQDHQNEFKTPEQVSVAYALVSP---AQFAAKVSVTPEEVQTYYQKN 263 Query: 171 KNITVRE--YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + L + Q Q ++ + A ++ + + AS Sbjct: 264 IDRYQGKGGILPFAEVKEQASADAQKQKGAKEAYEKAADAVNKFRASADIDAAAASLGSK 323 Query: 229 VSIGKA--------QYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 V + E+++ L Q P T KG+ + + DK+ Sbjct: 324 VEKTPLFSSKAPAAGLVGENEVV---ARALALKQGELGGPVETAKGIYLVKVLDKKPAAV 380 Query: 281 EIALKAYLSAQNTPTKIE--------KHEAEYVKKLRSNA 312 + + +E K E +++L A Sbjct: 381 --PPLSQIRGAVEAKAVEVKAADLAKKKAEEALQQLAKGA 418 >gi|237800449|ref|ZP_04588910.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023308|gb|EGI03365.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. oryzae str. 1_6] Length = 91 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 6/77 (7%), Positives = 21/77 (27%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + + ++ + +K +S G + + ++ K Sbjct: 11 KNAEEAEQLKQRIAKGEAFDVLAKKHSSCPSGKRGGDLGEVRPGQMVGAIDQVIFKKPLR 70 Query: 257 TT-NPYVTQKGVEYIAI 272 P ++ G + + Sbjct: 71 VVHGPVKSKFGYHLVQV 87 >gi|237831619|ref|XP_002365107.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, putative [Toxoplasma gondii ME49] gi|211962771|gb|EEA97966.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, putative [Toxoplasma gondii ME49] gi|221487040|gb|EEE25286.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting, putative [Toxoplasma gondii GT1] gi|221506728|gb|EEE32345.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting, putative [Toxoplasma gondii VEG] Length = 116 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 7/66 (10%), Positives = 19/66 (28%), Gaps = 1/66 (1%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 +S +R +++ G + + F++ ++ T Sbjct: 48 KSSVRQENFAQLANQYSDCGSFQKGGDLGFFTRGMMQKPFEDASFALQVGEISDIIDTDS 107 Query: 266 GVEYIA 271 G+ I Sbjct: 108 GLHLIY 113 >gi|332829600|gb|EGK02246.1| hypothetical protein HMPREF9455_01516 [Dysgonomonas gadei ATCC BAA-286] Length = 671 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 24/255 (9%), Positives = 61/255 (23%), Gaps = 35/255 (13%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 + TI+G + ++ + V I L Sbjct: 20 AQQDDTVVFTIDGVPVYKSEVEYAYKKGNANAETKQDFGDFVNSYINFKL---------- 69 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 N + + ++ +A Q + +++++ K Sbjct: 70 ----------------NVTEAKAQQLDTTASYQRQLSSYRSQMAQQYMNNTDYEDEYIEK 113 Query: 156 YGNLEME-IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 E + N L L ++ E S LR Sbjct: 114 IYKRMKENVEINHVMFPFDNKEIVLPADTLRMYKKAMEARAKILKGGFTGTELSTLRSGA 173 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAIC 273 + G ++ + ++ + N + P +G + + Sbjct: 174 MFYPRAES-------RNGYIGWVSPFMFAAKVEDAIYSLPLNEVSMPIRAARGYHIVQVL 226 Query: 274 DKRDLGGEIALKAYL 288 ++R G + ++ + Sbjct: 227 NRRPAMGAVEIEQVV 241 Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 24/70 (34%), Gaps = 1/70 (1%) Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-NTPTKIEKH 300 + + + + P ++ G I + K ++ L + K+++ Sbjct: 305 MDFTMAAFSLEKAGDISKPVMSNYGYHIIRLLRKIPTESLDVMRNQLRERILRSDKVQEL 364 Query: 301 EAEYVKKLRS 310 E + L+S Sbjct: 365 SDEKRRSLKS 374 >gi|66046138|ref|YP_235979.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. syringae B728a] gi|63256845|gb|AAY37941.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. syringae B728a] gi|330970013|gb|EGH70079.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. aceris str. M302273PT] Length = 91 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 6/77 (7%), Positives = 20/77 (25%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + + + + +K +S G + + ++ K Sbjct: 11 KTAEEAEQLKLRIAKGEAFDVLAKKHSSCPSGKRGGDLGEVRPGQMVGAIDQVIFKKPLR 70 Query: 257 TT-NPYVTQKGVEYIAI 272 P ++ G + + Sbjct: 71 IVHGPIKSKFGYHLVQV 87 >gi|227904499|ref|ZP_04022304.1| peptidylprolyl isomerase [Lactobacillus acidophilus ATCC 4796] gi|227867754|gb|EEJ75175.1| peptidylprolyl isomerase [Lactobacillus acidophilus ATCC 4796] Length = 306 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 27/316 (8%), Positives = 80/316 (25%), Gaps = 41/316 (12%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 F + ++K + + + + S + S+ + G IT + Sbjct: 4 FNYMKSYMKKVAAVVAVAGVALST--AACSNSGSNSTVASYKGGKITQQQYYDEMK---- 57 Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 + K + +I+ +Q+ K + + + + + S Sbjct: 58 ---KSQAGKSTLANMIINRALEQQYGKYVSSKKVD----------KQYNNYKKQYGSQFS 104 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + + + + + + ++ +L Sbjct: 105 AVLQQNGMTASSFKENLKTNLLSEQALKHIKKITKKQEQQAW----KSYQPKVTVQHIL- 159 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL--LESDL 242 + +D + + +K++ GK ++ L Sbjct: 160 ----------VAKKSTAQDIIKQLKDGKSFSSLAKKYSLDTATKNKAGKLPSFDSTDNTL 209 Query: 243 HPQFQNLLKK-SQNNT-TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 F+ K + P +Q G I + + G K + + + + Sbjct: 210 DSAFKTAAFKLKTGEVTSTPVKSQSGYHVIKMINHPAKGKFADHKKAIDDEIYASMAQDQ 269 Query: 301 E--AEYVKKLRSNAII 314 + + + A + Sbjct: 270 STMKDVIATVLKRADV 285 >gi|330937806|ref|XP_003305631.1| hypothetical protein PTT_18538 [Pyrenophora teres f. teres 0-1] gi|311317253|gb|EFQ86277.1| hypothetical protein PTT_18538 [Pyrenophora teres f. teres 0-1] Length = 191 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 8/105 (7%), Positives = 23/105 (21%), Gaps = 1/105 (0%) Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + + ++ Q + + + Sbjct: 84 HRDSRRPASWREPKITRSLQEAREMIEGYHAQIKAYEDGTGEANAKSLSELATTESDCSS 143 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + + D+ +F+ + ++ T GV I Sbjct: 144 ARKGGDLGFFGKGDMQKEFEQAAFALEKGQVSDMVETASGVHLIQ 188 >gi|226500554|ref|NP_001150505.1| peptidyl-prolyl cis-trans isomerase 1 [Zea mays] gi|195639680|gb|ACG39308.1| peptidyl-prolyl cis-trans isomerase 1 [Zea mays] Length = 124 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 6/76 (7%), Positives = 17/76 (22%), Gaps = 1/76 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + + + + + + G + F++ Sbjct: 45 DAAARLLDLRNQILSGQANFADLAARHSDCSSARRGGDLGTFGRRQMQKPFEDATYALKV 104 Query: 255 NNTTNPYVTQKGVEYI 270 ++ T GV I Sbjct: 105 GELSDIVDTDSGVHII 120 >gi|195448338|ref|XP_002071614.1| GK10078 [Drosophila willistoni] gi|194167699|gb|EDW82600.1| GK10078 [Drosophila willistoni] Length = 167 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 7/91 (7%), Positives = 18/91 (19%), Gaps = 1/91 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + + ++ G Sbjct: 73 RPSSWREENITRTKEEAQMLLEVYRNKIINEEATFDELARSYSDCSSAKRGGDLGKFGRG 132 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 D+ F+ + + T G+ I Sbjct: 133 DMQAAFEKAAFALNVGQMSGIVDTDSGLHII 163 >gi|164659402|ref|XP_001730825.1| hypothetical protein MGL_1824 [Malassezia globosa CBS 7966] gi|159104723|gb|EDP43611.1| hypothetical protein MGL_1824 [Malassezia globosa CBS 7966] Length = 172 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 21/80 (26%), Gaps = 1/80 (1%) Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + + S+ + +++ S G + F++ Sbjct: 89 KDEAITQLREFQQQLGSQPNVQTFSQLAGQYSDCSSARSGGDLGSFSRGQMQRPFEDAAF 148 Query: 252 K-SQNNTTNPYVTQKGVEYI 270 S ++ T GV I Sbjct: 149 GLSVGEMSDIVETDSGVHLI 168 >gi|113868643|ref|YP_727132.1| parvulin-like peptidyl-prolyl isomerase [Ralstonia eutropha H16] gi|113527419|emb|CAJ93764.1| Parvulin-like peptidyl-prolyl isomerase [Ralstonia eutropha H16] Length = 250 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 23/270 (8%), Positives = 67/270 (24%), Gaps = 26/270 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 I+ EV+ + + + L + V++++ + L ++ G+ Sbjct: 4 IVRIDDEVLGFEEFVRLLKLTGQ-------FEGLVEQMVRDKLTVHAAKRQGVVVTPE-- 54 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + A + + + + + + M + E Sbjct: 55 --EIQERADQFRRVQGLHRAADMNHYLDALNISLDEFEAFVTDSLYQERMMEQV-CSEAA 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + A + V+ S K + + + Sbjct: 112 VQAYFALNSPRFDSIEVSHIVVDSEG-----------KAKELISYLQDDPDAFAEMAREH 160 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKG--VEYIAICDKRDLG 279 + G+ +L L + + + P+ + E + +K Sbjct: 161 SIADTRERGGEIGKVLRGSLKTDIEAKVFNAEPGDLLGPFPSADRSFFEVFLVREKHPAT 220 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + + + E+V + R Sbjct: 221 LDSEVAVEVRRLLREDWLMARAQEHVIEAR 250 >gi|118589929|ref|ZP_01547333.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Stappia aggregata IAM 12614] gi|118437426|gb|EAV44063.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Stappia aggregata IAM 12614] Length = 630 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 8/128 (6%), Positives = 30/128 (23%), Gaps = 14/128 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + ++ L +++ F + I + + + + ++ D + Sbjct: 1 MLDALRKGAGTWVAKLFIALLIMSFAVWGISGFLTGVGQNT-AAKVGDTEVSLFDFDRAY 59 Query: 61 ALLKLQKINGELE-------------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + + + +L+ E + + + Sbjct: 60 RQDLGRLAQQFGRQLTPAEGAALGVPQQTLGKLVAEAAMNNTAQNMKLGVSDERLATIIQ 119 Query: 108 QHARNTGL 115 G Sbjct: 120 SDPAFQGP 127 >gi|67539950|ref|XP_663749.1| hypothetical protein AN6145.2 [Aspergillus nidulans FGSC A4] gi|40738741|gb|EAA57931.1| hypothetical protein AN6145.2 [Aspergillus nidulans FGSC A4] Length = 210 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 8/164 (4%), Positives = 32/164 (19%), Gaps = 1/164 (0%) Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 S F ++++ + + + Sbjct: 15 WEVRHSNSKNLPYYFNPATRESRWEPPADTDMETLKMYMATYHSGAATYHEAPSQEGKIR 74 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + + + E + + + Sbjct: 75 CSHLLVKHRDSRRPSSWREAEITRTKEEAREILRGHQERIMRGEIRLGDLAMSESDCSSA 134 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ +F+ ++ + G+ I Sbjct: 135 RKKGDLGFFGRGEMQKEFEEAAFALQPGQVSDIVESGSGLHLIE 178 >gi|303316792|ref|XP_003068398.1| Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, putative [Coccidioides posadasii C735 delta SOWgp] gi|240108079|gb|EER26253.1| Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, putative [Coccidioides posadasii C735 delta SOWgp] Length = 126 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 25/85 (29%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A K +F+ G + + L F+ + + Sbjct: 43 EKHSKKEEALAKLRAGAKFDEVAREFSED-KARQGGSLGWKIRGSLDAAFEKAAYDLEPS 101 Query: 257 TTN-P----YVTQKGVEYIAICDKR 276 TT P T G I + ++ Sbjct: 102 TTASPKYAEVKTGFGYHIIMVEGRK 126 >gi|145355107|ref|XP_001421810.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582049|gb|ABP00104.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 95 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 7/78 (8%), Positives = 20/78 (25%), Gaps = 1/78 (1%) Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK- 252 + + + ++ + + +K + G + F++ Sbjct: 14 KEAAIDELLRYRDAVANGEATFADVAKKVSDCSSAKRGGDLGEFGPGQMQRAFEDATYAL 73 Query: 253 SQNNTTNPYVTQKGVEYI 270 + T GV I Sbjct: 74 KIGEMSEAVETDSGVHVI 91 >gi|312079986|ref|XP_003142408.1| Pin1-type peptidyl-prolyl cis-trans isomerase [Loa loa] gi|307762427|gb|EFO21661.1| Pin1-type peptidyl-prolyl cis-trans isomerase [Loa loa] Length = 186 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 12/108 (11%), Positives = 28/108 (25%), Gaps = 1/108 (0%) Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + I +K + + K EE+ + K ++F+ Sbjct: 76 HCAHLLVKHNGSRRPSSWRSDVITRSKEDARKILIGYRKQIEEASDKKSKLRELAKEFSD 135 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIA 271 G + + F++ ++ T G+ I Sbjct: 136 CSSAKRGGDLGFFKRRQMQKSFEDAAFALGVGQLSDVVDTDSGLHLIY 183 >gi|213024001|ref|ZP_03338448.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 215 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/168 (11%), Positives = 50/168 (29%), Gaps = 20/168 (11%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S+ +NG+ I+ Sbjct: 1 MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYL-IGGSNNYAAKVNGQEISRAQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQ 119 Query: 105 FFVQHARNT---GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 +++ +++ G+ + + Q L Q ++ Sbjct: 120 AIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYTQALRNQLTTQQLIN 167 >gi|158423833|ref|YP_001525125.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Azorhizobium caulinodans ORS 571] gi|158330722|dbj|BAF88207.1| PPIC-type PPIASE domain protein [Azorhizobium caulinodans ORS 571] Length = 638 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 34/388 (8%), Positives = 90/388 (23%), Gaps = 86/388 (22%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI- 60 + S I + + + F + I S S+ I G I+ ++ Sbjct: 11 LQNLRKGASGLIAKVFLLVLTVSFVLWGI-SGVFTNYSTGTVAEIGGTQISTDAYRQQYL 69 Query: 61 ------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 A+ Q ++ + ++I E + K G+ + Sbjct: 70 DQIQRIGRQAGRAITPDQARAFGFDRQVLNQMITEATLDEAARKLGLGMSDALIADSIRD 129 Query: 109 HARNTG-----LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND------------ 151 + F L G+ + F + + ++++ Sbjct: 130 NPALRPPGATAFDPAYFQQLLQANGLTEQRFLASERKRVLRQQLIESLGGARAPEVLKTA 189 Query: 152 --------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTV-------- 183 + ++ A K + + Sbjct: 190 VHSFENEERAVSYLDVTSSSVPAPAAPTDEQLKAYYDGHKVVFRAPEYRKLTLLVLTPAT 249 Query: 184 ----LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG------- 232 + + R E+ ++ ++ + A + + G Sbjct: 250 LAPWIQISDADAKAAYDRNAARFGTPEQRDVQQIVFPSEADAKA-ALDKIKGGTSFADIA 308 Query: 233 ----------KAQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + +S + + T++P + G + + Sbjct: 309 KARGLSDKDTNLGLVAKSAIIDPKVADAAFALPADGTSDPVQGRFGYALVHVTTIVPATV 368 Query: 281 EIALKAYLSAQNTPTK-IEKHEAEYVKK 307 + A + A +E+ E + K Sbjct: 369 K--PFAEVEAGLRRDLALERARRELLDK 394 >gi|154503863|ref|ZP_02040923.1| hypothetical protein RUMGNA_01689 [Ruminococcus gnavus ATCC 29149] gi|153795462|gb|EDN77882.1| hypothetical protein RUMGNA_01689 [Ruminococcus gnavus ATCC 29149] Length = 350 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 30/332 (9%), Positives = 80/332 (24%), Gaps = 34/332 (10%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + K V I V I + + T+ E ++ G + + + Q Sbjct: 1 MVGLKKRGVITAVAGILAAVTITGCSAAPDNDATVVTVGTEKVSYGVANFYARMQQAQYE 60 Query: 69 -------------------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 ++ ++ L L KQ + + Sbjct: 61 SFYAGLMGMSADTMWSQEVEEGKTYEENMKDSILESLENMYLVKQHASEYKVELTDEEKK 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + + + + + IQ +K + + Sbjct: 121 KIDKAAEEFVEDNTLEDKEVVSGYKKYVKEYLELATIQQKMDAPMKEGVDENVSDEDAAQ 180 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + T ++ ++V D++ + + + D + + Sbjct: 181 KKIEYVQFSYTKKDDSGQSVQM--TDDEKKAEKEKAQTFLDTVSADPDKDMNAAAASAEK 238 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 ++ L L ++ + T+ T G+ + K + Sbjct: 239 EVQTATFDSESSTLNADLLK---AADALENVGDVTSLIETDDGIYVAKLTSK----LDRE 291 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + +K + V+ R I Sbjct: 292 ATDQKKKEIVEERKQKQYEDQVETWRKETDIK 323 >gi|94500922|ref|ZP_01307447.1| Parvulin-like peptidyl-prolyl isomerase [Oceanobacter sp. RED65] gi|94426862|gb|EAT11845.1| Parvulin-like peptidyl-prolyl isomerase [Oceanobacter sp. RED65] Length = 89 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 8/71 (11%), Positives = 23/71 (32%), Gaps = 1/71 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQ 264 ++ ++ ++ GK + E D + + L+ + P T Sbjct: 18 IKNLEEGADFAQLAQEHSACPSAKDGGKLGNMSEQDFPAEIKEALESAPLGTVVGPIETH 77 Query: 265 KGVEYIAICDK 275 G+ + ++ Sbjct: 78 HGIHILRKDNR 88 >gi|257456351|ref|ZP_05621548.1| basic membrane protein [Treponema vincentii ATCC 35580] gi|257446437|gb|EEV21483.1| basic membrane protein [Treponema vincentii ATCC 35580] Length = 360 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 102/344 (29%), Gaps = 49/344 (14%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K ++ + + + + + ++ T IT G + R++ L+ + Sbjct: 1 MKKNVITLLIALSLSIGAFAQTNLQPIAEVKLT-GRAPITLGQLKTRVSALEKEIGRKMT 59 Query: 73 ---EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT---------------- 113 + + LI E L Q EK GI + VN +F ++ + Sbjct: 60 FAERQQTLDGLINERLIVQAAEKDGIKIMDSEVNNYFNEYVSSQLGQQISEADFAKLIKE 119 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPANKQK 169 + + G+ FK +L Q V + + + +I + + Sbjct: 120 KTNMSLDEYMKAQNGMTLAEFKSFLRTQLTAQAYVMQKKQKELQSIPSPTDEQIRSYYEV 179 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 K V+ ++ L P + + ++ + K K Sbjct: 180 NKQSFVQPDTVQLFLVVAPKGDKPSAAEKTIKDIQ-KKLTANPKDTADIRTKSQEKNSTY 238 Query: 230 SIGKAQYLLESDLH--------PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG-- 279 G+ ++ ++ L + + + T + + +K+D Sbjct: 239 QAGEI-FVSKTSLAAEQLGIPMDELLKIFNMKVGEVSPITETAVNYQCFVVIEKKDAKIL 297 Query: 280 ---------GEIALKAYLSAQNTPTKIEKHEAEYV----KKLRS 310 G ++L Y+ + + + + +LR Sbjct: 298 GLSDVVEPGGNVSLYEYIKKMVIMQRQNEALNDALVSVTNELRK 341 >gi|219118791|ref|XP_002180162.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217408419|gb|EEC48353.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 163 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 11/103 (10%), Positives = 30/103 (29%), Gaps = 1/103 (0%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + + + S + + QG ++ ++A + ++ + Sbjct: 57 HKDSKRPSSWRVPKITISREQAREELQGLLEILQEEAHDMGSLKATFEELAKEESDCSSA 116 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 G + P+F++ + T GV I Sbjct: 117 KRGGDLGVFGRGKMRPEFEHAAFALDVGQLSGLIDTSSGVHII 159 >gi|328865110|gb|EGG13496.1| hypothetical protein DFA_11257 [Dictyostelium fasciculatum] Length = 374 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 10/91 (10%), Positives = 20/91 (21%), Gaps = 1/91 (1%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + + + K + K K++ G + Sbjct: 281 RSWRQENEITRTKEEAMVKLQGYRDMITSGSHKFDELAHKYSDCSSAKRGGDLGFFTRGQ 340 Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + F++ T T GV I Sbjct: 341 MQKAFEDASFALQVGEMTEIVSTDSGVHIIE 371 >gi|323438380|gb|EGA96144.1| peptidyl-prolyl cis-isomerase [Staphylococcus aureus O11] gi|323441708|gb|EGA99353.1| peptidyl-prolyl cis-isomerase [Staphylococcus aureus O46] Length = 213 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/181 (12%), Positives = 55/181 (30%), Gaps = 8/181 (4%) Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 ++ + + + +++I ++ K + LI+ L ++ QK Sbjct: 3 DKYKENLRTAAYHKELLSDKIKISDSEIKEDSKKASHILIKVKSKKSDKEGLDDKEAKQK 62 Query: 201 RIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT 258 + +E K +K + G+ Y+L+ F+ K + Sbjct: 63 AEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVS 122 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE---KHEAEYVKKLRSNAIIH 315 + + G I + K L + K++ K + K L + Sbjct: 123 DVVKSSFGYHIIKAD---KPTDFNSEKQSLKEKLVDQKVQKNPKLLTDAYKDLLKEYDVD 179 Query: 316 Y 316 + Sbjct: 180 F 180 >gi|299470724|emb|CBN79770.1| peptidyl-prolyl cis-trans isomerase C [Ectocarpus siliculosus] Length = 184 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 38/126 (30%), Gaps = 2/126 (1%) Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 + R + + + K + EE L K EK ++ G+ Sbjct: 55 EKMSDPRYARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRL 114 Query: 235 QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICD-KRDLGGEIALKAYLSAQN 292 + L + P+F ++ P TQ G I + + L + + Sbjct: 115 KLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVESCNKPQNTWKMLFDDIVDKV 174 Query: 293 TPTKIE 298 + + E Sbjct: 175 SGKEEE 180 >gi|326403424|ref|YP_004283505.1| hypothetical protein ACMV_12760 [Acidiphilium multivorum AIU301] gi|325050285|dbj|BAJ80623.1| hypothetical protein ACMV_12760 [Acidiphilium multivorum AIU301] Length = 628 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 16/155 (10%), Positives = 37/155 (23%), Gaps = 12/155 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M S + L ++I ++ +F + S +S T+ G+ I ++ Sbjct: 1 MLSMIRQLLDNWIVRAFFVVLIGVFVFWGVSSVVMGIGASDAIATVGGQPIKIEAVNAAY 60 Query: 61 ALLKLQKINGE------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 A+ I + E + G+ + Sbjct: 61 QRTLNAYATQNSGREPSKGERRLFADQALGTAIDRAAMELEARRMGVVAPPAAIRQQVFA 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 G + + + N + Sbjct: 121 IPAFHGPDGKFDKATFNAVLANHNLTPAAFMAEIA 155 >gi|148260238|ref|YP_001234365.1| hypothetical protein Acry_1235 [Acidiphilium cryptum JF-5] gi|146401919|gb|ABQ30446.1| hypothetical protein Acry_1235 [Acidiphilium cryptum JF-5] Length = 628 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 16/155 (10%), Positives = 37/155 (23%), Gaps = 12/155 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M S + L ++I ++ +F + S +S T+ G+ I ++ Sbjct: 1 MLSMIRQLLDNWIVRAFFVVLIGVFVFWGVSSVVMGIGASDAIATVGGQPIKIEAVNAAY 60 Query: 61 ALLKLQKINGE------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 A+ I + E + G+ + Sbjct: 61 QRTLNAYATQNSGREPSKGERRLFADQALGTAIDRAAMELEARRMGVVAPPAAIRQQVFA 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 G + + + N + Sbjct: 121 IPAFHGPDGKFDKATFNAVLANHNLTPAAFMAEIA 155 >gi|260891097|ref|ZP_05902360.1| putative chaperone SurA [Leptotrichia hofstadii F0254] gi|260859124|gb|EEX73624.1| putative chaperone SurA [Leptotrichia hofstadii F0254] Length = 608 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 50/176 (28%), Gaps = 6/176 (3%) Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + N + Y E + A K+ I + K+ Sbjct: 334 YSQKYYNYLIDTYKPDEAALQAKFNAKKDSYNIPNSIGGYVIGEEYQAGDGDFEAAKKQA 393 Query: 204 DAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYL-LESDLHPQFQNLLKK-SQNNTTNP 260 K ++F+ + G S L P+F N +K + P Sbjct: 394 QDIMKTTNKDNFAAKAKEFSKDPGSANNGGSLGETADLSQLVPEFANAVKSGKAGDIVGP 453 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIH 315 TQ G I I K +A +++ ++ + V+ L+ A I Sbjct: 454 IKTQFGYHIIYIQSKDANNENVAKVSHILITPTISEASKQKIIKKVQDLK--AEIE 507 Score = 45.4 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 31/251 (12%), Positives = 76/251 (30%), Gaps = 25/251 (9%) Query: 3 SKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL 62 K +S + + +LI + + + T+NG I D + Sbjct: 8 KKAIQIVSAVMIGIFGIAMLITGILFLKNNVFGAMNHREVIATVNGAKIYRDDFDRESYG 67 Query: 63 LKLQK------------------------INGELEKIAVQELIVETLKKQEIEKSGITFD 98 LK Q + + + +Q +I + + GI Sbjct: 68 LKAQLSEINQQKIQQLSQVGVSAENIKNIPDNIINEYVLQLMINKEVLLSSAHNLGIKVS 127 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF-MLKYG 157 +N F + + + ++ ++F+ L +G FK+ + + I + + F K Sbjct: 128 GAEINKEFNNYQKQSQMNRKEFADHLRNRGYNITSFKKAIKDEKIIEKMREKIFSNDKVT 187 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + E++ + K + + + + K + + ++ Sbjct: 188 DEEIKKAYERNKYTQAFLNQDFEDVKEQIRENMTQDKNIMILKSYIAKAKEKTKIVFKNK 247 Query: 218 KLEKFASKIHD 228 EK + + Sbjct: 248 DFEKIYASMTA 258 >gi|327184064|gb|AEA32511.1| peptidylprolyl isomerase [Lactobacillus amylovorus GRL 1118] Length = 301 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 24/313 (7%), Positives = 75/313 (23%), Gaps = 41/313 (13%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + ++K + + + + S S+ + G IT + Sbjct: 1 MKSYMKKIAAVVAVAGVALST--AACSNGGSNSTVASYKGGKITQQQYYDEMK------- 51 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + K + +I+ +Q+ K + + + + + + + Sbjct: 52 KSQAGKSTLANMIINRALEQQYGKYVSSKKVDKQYNNYKKQYGSQFSAVLQQNGMTASSF 111 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + + ++ +L Sbjct: 112 KENLKTNLLSEQALKHIKKISKKQEQQVWKS--------------YQPKVTVQHIL---- 153 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL--LESDLHPQ 245 + + + + +K++ GK ++ L Sbjct: 154 -------VAKKSTAQSIIKQLKDGKSFKSLAKKYSLDTATKNKAGKLPAFDSTDNTLDSS 206 Query: 246 FQNLLKK-SQNNT-TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-- 301 F+ K + P +Q G I + G K + + + + Sbjct: 207 FKTAAFKLKTGEVTSTPVKSQSGYHVIKMISHPAKGKFADHKKTIDDEIYASMAQDQATM 266 Query: 302 AEYVKKLRSNAII 314 + + + A + Sbjct: 267 KDVISTVLKRADV 279 >gi|310639535|ref|YP_003944293.1| ppic-type peptidyl-prolyl cis-trans isomerase [Paenibacillus polymyxa SC2] gi|309244485|gb|ADO54052.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus polymyxa SC2] Length = 316 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 35/310 (11%), Positives = 85/310 (27%), Gaps = 27/310 (8%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSR-----IRTTINGEVITDGDISKRIALLKLQKIN 69 ++ T V + ++ + S+ + E I++ + Sbjct: 13 IILTVSVAALGGLIMLRGLLKPGDVSKDDGDHTVAEMGQEGISEEQWVAELKKRYGTNT- 71 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + +++ + E ++ GI + Q ++ + ++ ++ Sbjct: 72 -------LLQMLNRKAVQAEAKRLGIKITQEDLQQVLEQDSK----GYDSEHAYFEEMQR 120 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 L ++ + ++ E EI ++ + L +I Sbjct: 121 QFGLNPVDLRNEAEYRIGLEKIATQGIQVEETEIDEYWEQHPEEFA--VGKQIKLAAIYV 178 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 K + + R+K E + L + +G + Sbjct: 179 AKAEEAETLLDRVKQGESFDMLLREHSVSGNPLGEDHSG-QLGWLDEYDPFQPEAVMKAA 237 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT--KIEKHEAEYVKK 307 + S + P G I + D R K + Q + + + V+K Sbjct: 238 RELSSGDVAGPISVNDGYAVIYVQDVR--LKNSPDKQQIRQQIRRSLALAQAAPLDEVEK 295 Query: 308 -LRSN--AII 314 LR A I Sbjct: 296 SLRDKYGARI 305 >gi|289626311|ref|ZP_06459265.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650291|ref|ZP_06481634.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. aesculi str. 2250] gi|330866996|gb|EGH01705.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 91 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 6/77 (7%), Positives = 20/77 (25%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 + + + + +K +S G + + ++ K Sbjct: 11 KTAEEAEQLKLRIAKGEAFDVLAKKHSSCPSGKRGGDLGEVRPGQMVGAIDQVIFKKPLR 70 Query: 256 NTTNPYVTQKGVEYIAI 272 P ++ G + + Sbjct: 71 MVHGPIKSKFGYHLVQV 87 >gi|125776498|ref|XP_001359294.1| GA11241 [Drosophila pseudoobscura pseudoobscura] gi|54639037|gb|EAL28439.1| GA11241 [Drosophila pseudoobscura pseudoobscura] Length = 130 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 26/87 (29%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------L 249 Q +I +A E K ++ G + + + FQ+ Sbjct: 45 EKQGKIMEAMEKLKAGQKFPEVATAYSED-KARQGGDLGWQIRGAMVGPFQDAAFALPIS 103 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKR 276 + T P T+ G I + K+ Sbjct: 104 NVNNPVYTDPPVKTKFGYHIIMVEGKK 130 >gi|328771505|gb|EGF81545.1| hypothetical protein BATDEDRAFT_10474 [Batrachochytrium dendrobatidis JAM81] Length = 160 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 9/91 (9%), Positives = 21/91 (23%), Gaps = 1/91 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + +Q + + + G Sbjct: 66 RPSSWKEANISRSKEEAMQIIQNFRAKIESGEVDLSTLAKTESDCSSASRGGDLGKFGYG 125 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + F+ +NP V+ G+ I Sbjct: 126 QMQASFEQAAFALKVGELSNPVVSDSGIHLI 156 >gi|299742349|ref|XP_001832406.2| peptidyl-prolyl cis-trans isomerase pin4 [Coprinopsis cinerea okayama7#130] gi|298405143|gb|EAU89440.2| peptidyl-prolyl cis-trans isomerase pin4 [Coprinopsis cinerea okayama7#130] Length = 139 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 9/86 (10%), Positives = 26/86 (30%), Gaps = 7/86 (8%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + +A + ++++ + G +++ + FQ+ + Sbjct: 55 EKHSKASEALQKIQEGQAFNKVAQEYSED-KAKAGGSLGWMVRGSMVGAFQDAAFALTPS 113 Query: 257 T------TNPYVTQKGVEYIAICDKR 276 T + T G I + +R Sbjct: 114 TVDKPITSGLVKTNFGYHIIMVEGRR 139 >gi|326470862|gb|EGD94871.1| peptidyl-prolyl cis-trans isomerase [Trichophyton tonsurans CBS 112818] gi|326478426|gb|EGE02436.1| peptidyl-prolyl cis-trans isomerase pin4 [Trichophyton equinum CBS 127.97] Length = 132 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 27/85 (31%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K +F+ G + + L F+ + + + Sbjct: 49 EKHSKKEEALEKLRAGAKFDEVAREFSED-KARQGGSLGWKVRGSLDAAFEKAAYELEPS 107 Query: 257 TTN-P----YVTQKGVEYIAICDKR 276 TT P T G I + ++ Sbjct: 108 TTGNPKYVEVKTGFGYHIIMVEGRK 132 >gi|315055243|ref|XP_003176996.1| peptidyl-prolyl cis-trans isomerase pin4 [Arthroderma gypseum CBS 118893] gi|311338842|gb|EFQ98044.1| peptidyl-prolyl cis-trans isomerase pin4 [Arthroderma gypseum CBS 118893] Length = 130 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 27/85 (31%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K +F+ G + + L F+ + + + Sbjct: 47 EKHSKKEEALEKLRAGAKFDEVAREFSED-KARQGGSLGWKVRGSLDAAFEKAAYELEPS 105 Query: 257 TTN-P----YVTQKGVEYIAICDKR 276 TT P T G I + ++ Sbjct: 106 TTGNPKYVEVKTGFGYHIIMVEGRK 130 >gi|153807136|ref|ZP_01959804.1| hypothetical protein BACCAC_01413 [Bacteroides caccae ATCC 43185] gi|149130256|gb|EDM21466.1| hypothetical protein BACCAC_01413 [Bacteroides caccae ATCC 43185] Length = 330 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/188 (11%), Positives = 44/188 (23%), Gaps = 6/188 (3%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL--LKLQKINGELEKIAVQE 79 L+ I S I +NGE I ++S + L E++ + Sbjct: 6 LLFLITFFISCNISNVNKDEIVAEVNGEKIYLSELSSQSKQEIFDLLNTAYEIKNRVLTN 65 Query: 80 LIVETLKKQEIEKSGI----TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 LI + L + + + D + A + SF K + Sbjct: 66 LIKQKLLENTAKNKNMSLEEFLDFLVQQKLLLDQDSIKKYYAINTESFYAKNSLIPLKKG 125 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 S + +L + + + + + Sbjct: 126 TIEEELSFQQRLRNRIVQALVDSLYQKADIKRYIYPPKQPECVVRDLCVHYRGNLDSSTS 185 Query: 196 GFVQKRIK 203 V Sbjct: 186 FIVASDYN 193 >gi|242077546|ref|XP_002448709.1| hypothetical protein SORBIDRAFT_06g031895 [Sorghum bicolor] gi|241939892|gb|EES13037.1| hypothetical protein SORBIDRAFT_06g031895 [Sorghum bicolor] Length = 209 Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 11/116 (9%), Positives = 29/116 (25%), Gaps = 1/116 (0%) Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + E ++ A+ +K+ R + + ++ K Sbjct: 91 SSAEEKVRASHILIKHEGSRRKASWRDPEGVAISATTRDDAADLVRALRDQIVSGDRKFE 150 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + + + G + F+ ++ T+ GV I Sbjct: 151 DIAAENSVCSSAKRGGDLGSFGRGKMQKAFEKAAFALKVGEISDVVDTESGVHIIK 206 >gi|312119670|ref|XP_003151720.1| hypothetical protein LOAG_16184 [Loa loa] gi|307753115|gb|EFO12349.1| hypothetical protein LOAG_16184 [Loa loa] Length = 55 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 19/55 (34%), Gaps = 7/55 (12%) Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTT-------NPYVTQKGVEYIAICDKR 276 ++ G ++ + FQ+ +T P TQ G I + K+ Sbjct: 1 MTGGDLGWMTRGSMVGTFQDAAFALPISTVDKPVYTDPPIRTQFGYHIIMVEAKK 55 >gi|238024473|ref|YP_002908705.1| hypothetical protein bglu_2g10690 [Burkholderia glumae BGR1] gi|237879138|gb|ACR31470.1| Hypothetical protein bglu_2g10690 [Burkholderia glumae BGR1] Length = 278 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 44/162 (27%), Gaps = 9/162 (5%) Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK-------R 201 K+ FM + E EI A K K+ L ++ D +K + Sbjct: 111 KDYFMRQITPSEAEISAYYNKHKSDYNLYSLSHILVKFEKDPSNLPAEQAKKIEAQAFNK 170 Query: 202 IKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTN 259 + E + + + G+ + L P F+ + Q + T Sbjct: 171 AQAIEARLKAGADFHELAAQLSDDANSRIDGGRVPETMARFLAPAFKPEILAAKQGDITP 230 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 P + G I + ++ EK Sbjct: 231 PLKSSFGYHIIMVEGVVPSDMARNRADVINDIREGKLAEKQI 272 >gi|282891870|ref|ZP_06300349.1| hypothetical protein pah_c200o014 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498130|gb|EFB40470.1| hypothetical protein pah_c200o014 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 354 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 37/330 (11%), Positives = 104/330 (31%), Gaps = 36/330 (10%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWA----------MSSRIRTTINGEVITDGDISKRIALL 63 K + + V I + +++R+ T NG++IT D+ K++ ++ Sbjct: 5 KKVLHFLVAFAALSSTIPLAAEPSLFRSQPEKIHVNNRVLATTNGKIITVMDVMKKMDIV 64 Query: 64 KLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 + +Q+LI + L + E+ + + V + Sbjct: 65 FYRNFPEYASSVPARLQFYQTNWSDVLQDLIDKELVMADAEEMKLPLTNGDVRQEMEEIF 124 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + D + + + + V + ++ +Q Sbjct: 125 GPDIIHNLDRAGLTYDEAWNSIKGDIIIRRMLYYR--VNTKAQAQATPQAIQTA-YEQYA 181 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK-FASKIHDV 229 K + ++ + + + + +++ +++ + L+K I V Sbjct: 182 KENVRPKEWTYYMISVRDEQDEKGAKIANQIYQQLQKTPVKIETLQDNLKKWLGDNIAQV 241 Query: 230 SIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPY--VTQKG----VEYIAICDKRD--LGG 280 ++ +E+++ + + + S N + P ++ + Sbjct: 242 NVSTKFSHMENEVSDENKQILATLSPGNYSKPIAQKSRATKSTVYRLFYLDSMNPGGAPP 301 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 +K + + T I K A Y+++LR+ Sbjct: 302 FDEVKDEIKSYLTDEAISKETASYLERLRA 331 >gi|240849525|ref|NP_001155773.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Acyrthosiphon pisum] gi|239789189|dbj|BAH71234.1| ACYPI008778 [Acyrthosiphon pisum] Length = 126 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 27/87 (31%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK---- 252 Q ++ +A E K ++ G +++ + FQ+ Sbjct: 41 EKQSKVLEAMEKLKAGVKFNEVATLYSED-KARQGGDLGWMIRGSMVGPFQDAAFALSVS 99 Query: 253 ---SQNNTTNPYVTQKGVEYIAICDKR 276 S T P T+ G I I K+ Sbjct: 100 SLASPVYTDPPVKTKFGYHIIMIEGKK 126 >gi|163788664|ref|ZP_02183109.1| possible peptidyl-prolyl cis-trans isomerase [Flavobacteriales bacterium ALC-1] gi|159875901|gb|EDP69960.1| possible peptidyl-prolyl cis-trans isomerase [Flavobacteriales bacterium ALC-1] Length = 647 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 27/276 (9%), Positives = 60/276 (21%), Gaps = 19/276 (6%) Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 + K N E L+ E + + + + A Sbjct: 92 LRYKKQLTKNYLSENKVTDVLVKEAYDRSNQDINASHILVRLAETETDTLKAYNEVLALR 151 Query: 120 FSSFLDKQGIGDNHFKQ---YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + + + K + + + + Sbjct: 152 ERAISEGFDKVKTEVHNGKTIFLEDLGYFSAFKMVYDFETAAYNTPVDEISMPFRTQFGY 211 Query: 177 EYLIRTVLFSIPDNKLQNQGFV-----------QKRIKDAEESRLRLPKDCNKLEKFASK 225 + V ++RI D + + ++F+ Sbjct: 212 HVVWVKEKRQSRGTVTAAHIMVALKQKDSLLDPEQRINDIYKKLNQGENFDALAKQFSDD 271 Query: 226 -IHDVSIGKAQYLLESDLHPQF---QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 GK L + Q K+ + + P+ T G + + + Sbjct: 272 KSSSNKGGKLSPFKSGQLSSEEFESQAFGLKADGDVSKPFKTAYGWHIVKRIKLKPIQDF 331 Query: 282 IALKAYLSAQNTPTKIEKHEA-EYVKKLRSNAIIHY 316 LK L + K V +L+ + Y Sbjct: 332 KDLKPSLEVKVKRDSRSKLINAAMVSELKKRYNMSY 367 >gi|313222184|emb|CBY39168.1| unnamed protein product [Oikopleura dioica] Length = 132 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 26/87 (29%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q ++ +A ++ S G ++L + FQ + + Sbjct: 47 EKQSKVLEAMGKLKEGQAFNTVATNYSED-KARSGGSLGWMLRGTMVGPFQEAAFQLPIS 105 Query: 257 TT-------NPYVTQKGVEYIAICDKR 276 T P T+ G I I K+ Sbjct: 106 TCSNPSYTDPPVKTKFGYHIIMIEGKK 132 >gi|320581233|gb|EFW95454.1| Peptidylprolyl-cis/trans-isomerase (PPIase) [Pichia angusta DL-1] Length = 469 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 8/92 (8%), Positives = 22/92 (23%), Gaps = 1/92 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + V+ + + + G Y Sbjct: 375 RPSSWKEQNITRTKEEAVELIKGYKAQIESGEASFEEIASEHSDCSSHSKNGDLGYFGPG 434 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 ++ P F+ ++ + G+ I Sbjct: 435 EMQPSFEKAAFGLQVGELSDVVESDSGIHLIE 466 >gi|148544489|ref|YP_001271859.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lactobacillus reuteri DSM 20016] gi|184153854|ref|YP_001842195.1| peptidylprolyl isomerase [Lactobacillus reuteri JCM 1112] gi|227363083|ref|ZP_03847219.1| peptidylprolyl isomerase [Lactobacillus reuteri MM2-3] gi|325682810|ref|ZP_08162326.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus reuteri MM4-1A] gi|148531523|gb|ABQ83522.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lactobacillus reuteri DSM 20016] gi|183225198|dbj|BAG25715.1| peptidylprolyl isomerase [Lactobacillus reuteri JCM 1112] gi|227071904|gb|EEI10191.1| peptidylprolyl isomerase [Lactobacillus reuteri MM2-3] gi|324977160|gb|EGC14111.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus reuteri MM4-1A] Length = 312 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 31/290 (10%), Positives = 82/290 (28%), Gaps = 34/290 (11%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + ++ I V ++ A ++ T +G IT+ + + K Sbjct: 1 MKSKKLIAIIAGVALM-MPLAACGNKAVATTSGGKITESEYYSSMKQTSA-------GKQ 52 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 +Q++I++ + +++ K + + + + + F Sbjct: 53 VLQQMILDKVLEKQYGKEV--------------------SDKQVNAQYNTYKNEYGSDFN 92 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 YL Q++ +K +++ + ++ Sbjct: 93 AYLQSQNLTEKSLKQQIRSNLLLTAA-ARHYSHITTKQINKQWTKYQPKVQTATILVGSK 151 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL--LESDLHPQFQNLLKK 252 + I +S + + + + GK ++ L ++ K Sbjct: 152 SDAEDIINQLNDSSNKYKTFKKLAKSKSTDSQTKNNGGKLPAFDNTDNQLDSAYKKAAFK 211 Query: 253 SQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 + TT P T G + I + + G + L Q + Sbjct: 212 LKTGEYTTTPVKTDDGYQVIYMIEHPAKGKKSQHINDLKNQIVQENMNNQ 261 >gi|297696521|ref|XP_002825436.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like [Pongo abelii] Length = 127 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 21/78 (26%), Gaps = 8/78 (10%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-------LLKKS 253 +I +A E + +++ G ++ + FQ Sbjct: 50 KIMEAMEKLKSGMRFNEVATQYSE-YKARQGGDLGWMTRGSMVGPFQEAAFTLPISGMDK 108 Query: 254 QNNTTNPYVTQKGVEYIA 271 T P T+ G I Sbjct: 109 PVFTDPPVKTKFGYHIIM 126 >gi|119503111|ref|ZP_01625196.1| PpiC-type peptidyl-prolyl cis-trans isomerase [marine gamma proteobacterium HTCC2080] gi|119461457|gb|EAW42547.1| PpiC-type peptidyl-prolyl cis-trans isomerase [marine gamma proteobacterium HTCC2080] Length = 297 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 16/197 (8%), Positives = 45/197 (22%), Gaps = 9/197 (4%) Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + A + + + L +E + +L Sbjct: 90 YHQFLFKQLETARELDKQLFQNELVLPDFEVLALERYKISKNDIAPVPEIREASHILRLC 149 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKA--QYLLESDLHP 244 DN + ++ + + N +F+ G+ +++ Sbjct: 150 TDNCDEASEAIETLQSL-KNRLEQGESFANLAIEFSQDPGSKTRGGRLSQGIERDAENVD 208 Query: 245 QF---QNLLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 Q ++ ++ G + + ++ L A+ + Sbjct: 209 QVVRDALFAIPEVGGFSDIVRSRFGFHILKLESITASRTRSFEEVRPALVAEIEKRFRQD 268 Query: 300 HEAEYVKKLRSNAIIHY 316 E + L I Sbjct: 269 AYRERLLSLAPEETIEI 285 >gi|255579823|ref|XP_002530749.1| 50S ribosomal protein L20, putative [Ricinus communis] gi|223529713|gb|EEF31655.1| 50S ribosomal protein L20, putative [Ricinus communis] Length = 224 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 19/76 (25%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 V + E+ K + +F+ G + F++ Sbjct: 146 AVSQLKAFREDIVSGKAKFEDIASRFSDCSSAKRGGDLGPFSRGQMQKPFEDATYALKVG 205 Query: 256 NTTNPYVTQKGVEYIA 271 + T GV I Sbjct: 206 EISEIVDTDSGVHIIM 221 >gi|119192926|ref|XP_001247069.1| hypothetical protein CIMG_00840 [Coccidioides immitis RS] gi|303312467|ref|XP_003066245.1| peptidyl-prolyl cis-trans isomerase ssp-1, putative [Coccidioides posadasii C735 delta SOWgp] gi|240105907|gb|EER24100.1| peptidyl-prolyl cis-trans isomerase ssp-1, putative [Coccidioides posadasii C735 delta SOWgp] gi|320033674|gb|EFW15621.1| peptidyl-prolyl cis-trans isomerase [Coccidioides posadasii str. Silveira] Length = 177 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 9/111 (8%), Positives = 25/111 (22%), Gaps = 1/111 (0%) Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + + + R + + + ++ + N Sbjct: 64 QKEGQIRASHLLIKHRDSRRPTSWREANITRSKEEAIEILNGHLQRIMSGEATLGNIAMT 123 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + G + + +F++ + TQ GV I Sbjct: 124 ESDCSSARKKGDLGFFGRGVMQKEFEDASFALKPGQISGIVETQSGVHLIE 174 >gi|194897597|ref|XP_001978686.1| GG19723 [Drosophila erecta] gi|190650335|gb|EDV47613.1| GG19723 [Drosophila erecta] Length = 169 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 12/165 (7%), Positives = 35/165 (21%), Gaps = 1/165 (0%) Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + + E +S N + + K + + P Sbjct: 1 MPDSEQLPEGWEKRTSRSTGMSYYLNVYTKESQWDQPTEPAKKTGGAGGASSGSGDAPDE 60 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 Q + + + R + + + + + ++ Sbjct: 61 VQCLHLLVKHKGSRRPSSWREANITRTKEEAQMLLEVYRNKIVQQEATFDELARSYSDCS 120 Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 G + F+ K + + + G+ I Sbjct: 121 SSKRGGDLGKFGRGQMQAAFEEAAFKLNVGQLSGIVDSDSGLHII 165 >gi|295108815|emb|CBL22768.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Ruminococcus obeum A2-162] Length = 510 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 31/340 (9%), Positives = 88/340 (25%), Gaps = 46/340 (13%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKRIALLKLQKI-- 68 + T L +++ + T++G I G +S + + Q Sbjct: 4 MTKKTAVVALAGVMAAGMLTGCGEKALDGTKTVATVDGTEIPLGMLSLSVREGQAQAEAM 63 Query: 69 -----------------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 + + A++++ + + K++ + + Sbjct: 64 YKSFMGGSDYSIWGTEAEKGKTYGEQAVEQALKDIELMCILKEKAADYDVEITEDDEKAI 123 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 A + ED L + + +S D + D + E + + Sbjct: 124 ADAAAAFMSANTEDTLKTLAVTEDQVKTYLELETYKSRMHDPIIADVDKNVSDEEAQQSS 183 Query: 166 NKQK--------MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 I ++ + +L + + + + K + D+ Sbjct: 184 FNYVSISTSDLSDDEIKQKKEDAQKILDGLNADPDGDFSEIAKSVDDSYTVLSGSFDTNE 243 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDK 275 + S D + + + +L+ ++ P T + + Sbjct: 244 DAAEEDSDDEDET-----TASSGNYPDEVMKVLRTLKDGEVGPDVIETDSSYYVVRLDKV 298 Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 D K + + + +++ + A I Sbjct: 299 NDEDATATKKESIISTRENELYTETTDKWMDE----ADIK 334 >gi|258576633|ref|XP_002542498.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Uncinocarpus reesii 1704] gi|237902764|gb|EEP77165.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Uncinocarpus reesii 1704] Length = 124 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 29/85 (34%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A K +++ G + + L+ +F+ + + + + Sbjct: 41 EKHSKKEEALGKLRDGAKFDEVAREYSED-KARQGGSLGWKVRGSLNGEFEKVAYELEPS 99 Query: 257 TTN-P----YVTQKGVEYIAICDKR 276 TT P T G I + ++ Sbjct: 100 TTANPKYAEVKTGFGYHIIMVEGRK 124 >gi|225375823|ref|ZP_03753044.1| hypothetical protein ROSEINA2194_01455 [Roseburia inulinivorans DSM 16841] gi|225212258|gb|EEG94612.1| hypothetical protein ROSEINA2194_01455 [Roseburia inulinivorans DSM 16841] Length = 367 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 25/313 (7%), Positives = 72/313 (23%), Gaps = 22/313 (7%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 T ++ ++ + T++G+ I G ++ A L+ + + Sbjct: 6 FTTLLVSSVLAASMLVGCGGINKNETVATLDGQEIKLG-VANFAARLQQAEADDFYRAYF 64 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS------AEDFSSFLDKQGIG 130 ++ L T +S + +N ++ + + Sbjct: 65 GDDVWSSDLYNNGTTMEDNTKNSVIEMIENLYILQNHMADYDVTLTDDETAKIAETAAQF 124 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME----IPANKQKMKNITVREYLIRTVLFS 186 + + +++ I + + V S Sbjct: 125 MADNDDKAVNALGATEDIVKEYLTLVTVQSKMRAAIIADADTNVSDADANTSAYSYVNVS 184 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA---QYLLES--D 241 K + + + E + K + G Sbjct: 185 KTSYKDADGNTQEYTDDEKAELADTVQKFHDAAADTTLDTAADEYGYTVSTGTFSSDNTT 244 Query: 242 LHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 L + KS+ ++ T + + + D + + + Sbjct: 245 LDEEVLNALEGLKSEGELSDVVETDNYYYVLRLDEITDADATEEHRQEI----ISQRQSD 300 Query: 300 HEAEYVKKLRSNA 312 E ++ + A Sbjct: 301 LYNEVLQGWKDEA 313 >gi|331006788|ref|ZP_08330054.1| peptidyl-prolyl cis-trans isomerase C [gamma proteobacterium IMCC1989] gi|330419406|gb|EGG93806.1| peptidyl-prolyl cis-trans isomerase C [gamma proteobacterium IMCC1989] Length = 91 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 8/77 (10%), Positives = 24/77 (31%), Gaps = 1/77 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255 ++ + ++ + +K ++ G + + L + ++ K Sbjct: 11 KNKEAAEKLKQRLSKGEAFDVLAKKHSTCNSAKKGGDLGEIRKGQLVKSVEQVIFKKPLK 70 Query: 256 NTTNPYVTQKGVEYIAI 272 P +Q G I + Sbjct: 71 QVHGPVKSQFGFHLIEV 87 >gi|17647355|ref|NP_523428.1| dodo [Drosophila melanogaster] gi|12644017|sp|P54353|DOD_DROME RecName: Full=Protein dodo gi|1147599|gb|AAC46958.1| dodo [Drosophila melanogaster] gi|7295516|gb|AAF50829.1| dodo [Drosophila melanogaster] gi|255760114|gb|ACU32641.1| SD16185p [Drosophila melanogaster] Length = 166 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 7/106 (6%), Positives = 24/106 (22%), Gaps = 1/106 (0%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + + R + + + + + ++ Sbjct: 57 EVHCLHLLVKHKGSRRPSSWREANITRTKEEAQLLLEVYRNKIVQQEATFDELARSYSDC 116 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 G + F++ K + N + + G+ I Sbjct: 117 SSAKRGGDLGKFGRGQMQAAFEDAAFKLNVNQLSGIVDSDSGLHII 162 >gi|119713671|gb|ABL97722.1| hypothetical protein MBMO_EB0-39H12.0098 [uncultured marine bacterium EB0_39H12] Length = 269 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 27/238 (11%), Positives = 62/238 (26%), Gaps = 11/238 (4%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I E+ I R E+ + D + Sbjct: 32 IFESEINSLIGTWVTQVGREPTLQEIDGIIRQL--LDEEILYREAMKLGLDKNDIIIKRR 89 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + ++ + + E + + V + L + ++ ++ + Sbjct: 90 LAQKIGFLRQEADSSLPSEEQVSDFYSKNIDKYFVAKRLTFSHVYFSTNDNGKTLAEEAL 149 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260 + + S + + F+SK + S +N+ + P Sbjct: 150 ILIKSGASESDFGEPFLLGKNFSSKS-------ISEIERSFGKQFSENIQNIIPKEWSGP 202 Query: 261 YVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ G I + D +K + K EY+K+LR+ I Sbjct: 203 LDSEYGSHLIYVNSISDSFTPSLEEIKDIVINDVILEKQNNSVNEYLKELRNKYQIEI 260 >gi|156306337|ref|XP_001617585.1| hypothetical protein NEMVEDRAFT_v1g225960 [Nematostella vectensis] gi|156194689|gb|EDO25485.1| predicted protein [Nematostella vectensis] Length = 367 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 11/120 (9%), Positives = 28/120 (23%), Gaps = 11/120 (9%) Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK 252 +++ + + G+ + + P F + + Sbjct: 144 KDEAKALANSLLAQAKSNPEGFSALAMANSDDPGSKNNGGEYDNITPGQMVPTFNDFVFN 203 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + T G I + K + K+E + +L A Sbjct: 204 NPVGSIGVVETDYGFHVIKVSGK---------YDAIRLATIAKKVEP-SNATIDELYRKA 253 >gi|254411803|ref|ZP_05025579.1| PPIC-type PPIASE domain protein [Microcoleus chthonoplastes PCC 7420] gi|196181525|gb|EDX76513.1| PPIC-type PPIASE domain protein [Microcoleus chthonoplastes PCC 7420] Length = 205 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 34/107 (31%), Gaps = 3/107 (2%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL-LKKSQ 254 + + + R++ C ++ + G ++L P+ +S+ Sbjct: 94 ERVEAERIIQLIRVQPASFCALALDYSQGKQSKENGGFLGIHFLAELQPEIAQAVTNRSE 153 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 +P TQ G + + +K ++ + T +E Sbjct: 154 GEVIDPIQTQLGYHILKL-EKWLPIEFREVREQILEYLFQTWLENKS 199 >gi|302675721|ref|XP_003027544.1| hypothetical protein SCHCODRAFT_86066 [Schizophyllum commune H4-8] gi|300101231|gb|EFI92641.1| hypothetical protein SCHCODRAFT_86066 [Schizophyllum commune H4-8] Length = 137 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 9/86 (10%), Positives = 25/86 (29%), Gaps = 7/86 (8%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + +A + ++++ + G +++ + FQ + Sbjct: 53 EKHSKATEALQKIQEGVAFNKVAQEYSED-KAKAGGSLGWMVRGSMVGPFQEAAFALTPS 111 Query: 257 T------TNPYVTQKGVEYIAICDKR 276 T + T G I + +R Sbjct: 112 TVDKPITSGLVKTNFGYHIIMVEGRR 137 >gi|254495144|ref|ZP_05108068.1| peptidylprolyl isomerase [Polaribacter sp. MED152] gi|85819494|gb|EAQ40651.1| peptidylprolyl isomerase [Polaribacter sp. MED152] Length = 695 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 39/115 (33%), Gaps = 1/115 (0%) Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK 252 + Q + R K + ++F+S V G+ + + + P F++ + Sbjct: 359 EEEAKQLADSLLAVVKRRKSKFADLAKEFSSDQASAVKGGEYDWYNYNRMTPAFRDFTFE 418 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + T G I I D+++ I + + + E ++ Sbjct: 419 GKKGDMDVVKTPFGFHVIKIDDQKNKQKVIKMATFSKDIVPSEETENAVFRQAEE 473 Score = 39.7 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 19/169 (11%), Positives = 48/169 (28%), Gaps = 1/169 (0%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 SK+ I ++ + + + + + + ++GE I+ + + + Sbjct: 4 LSKIRERSMFLIIIIGLALFAFVLDPSTLGDFFNSSKVNE-VGEVDGEAISRQEFANELE 62 Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 K Q E A + + ++K+ + N + Sbjct: 63 SYKQQTGGRASEMQAAKTVWDNIVRKKIYKNQLNEAGITIGEADVWNEVVNAPFVQNNPQ 122 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + +N FKQ+LA + + + + N Sbjct: 123 YQNEVGLFDENKFKQFLADTKENNEQLWAQWSSYMNQVRDNAETNTFNN 171 >gi|325266271|ref|ZP_08132950.1| peptidyl-prolyl cis-trans isomerase [Kingella denitrificans ATCC 33394] gi|324982233|gb|EGC17866.1| peptidyl-prolyl cis-trans isomerase [Kingella denitrificans ATCC 33394] Length = 292 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 22/292 (7%), Positives = 64/292 (21%), Gaps = 11/292 (3%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET 84 S + ++ T+NG I ++ R ++ Q + +++ I Sbjct: 6 MAAALAGVLLSAQLMAQTVVTVNGTKIDSDELDARAKFVQQQSQGQVKDSPELRQFIANE 65 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 + + + + + + + Q + Sbjct: 66 VVVETVVVQEAR---RLKLDQSADYKTAEADARRQARDRGLDKQPDFQANWKRFLNQVLM 122 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 ++ E + + + + + Q K Sbjct: 123 DVYAQHIVQQNPVTDEQLQERYNAIKTRYDNTDEVQIGEIITDKAEQAQAAIRELAAKKS 182 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT--NPYV 262 + + D ++ +++ + F + T Sbjct: 183 FADVARKYSIDPEVKAGQSAISDFMALVDL----KEARPKIFAAVQNLKAGEFTRQALNE 238 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + +R + E + ++ V L A I Sbjct: 239 DNKAFVVFYMSTRRKIAVE--PFEKVREGLLNNMRQERVQAAVGALMQKANI 288 >gi|121698307|ref|XP_001267778.1| peptidyl-prolyl cis/trans isomerase [Aspergillus clavatus NRRL 1] gi|119395920|gb|EAW06352.1| peptidyl-prolyl cis/trans isomerase [Aspergillus clavatus NRRL 1] Length = 188 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 7/109 (6%), Positives = 25/109 (22%), Gaps = 1/109 (0%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + R + + + ++ + + + + Sbjct: 77 DGKIRCSHLLVKHRDSRRPSSWREAEITRSKEEAIEILRGHEQRIQSGEVSLGDIAVSES 136 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ +F++ + T GV I Sbjct: 137 DCSSARKKGDLGFFGRGEMQKEFEDAAFALQPGQVSGIVETASGVHLIE 185 >gi|320038240|gb|EFW20176.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 124 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 25/85 (29%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A K +F+ G + + L F+ + + Sbjct: 41 EKHSKKEEALAKLRAGAKFDEVAREFSED-KARQGGSLGWKIRGSLDAAFEKAAYDLEPS 99 Query: 257 TTN-P----YVTQKGVEYIAICDKR 276 TT P T G I + ++ Sbjct: 100 TTASPKYAEVKTGFGYHIIMVEGRK 124 >gi|326204847|ref|ZP_08194701.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium papyrosolvens DSM 2782] gi|325985059|gb|EGD45901.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium papyrosolvens DSM 2782] Length = 348 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 27/331 (8%), Positives = 91/331 (27%), Gaps = 40/331 (12%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRI--------RTTINGEVITDGDISKRIA---- 61 + + V + + ++ + ++ + + I+ D + + Sbjct: 3 RKFVSALVAVALVLTAMIPAGNTFAAATTKTATPETYVAKVGTDNISKEDYNIFLKDAIS 62 Query: 62 ---------------LLKLQKINGELEKIAVQELIVETLKK---QEIEKSGITFDSNTVN 103 + K + +K+A+ ++ ++ + + + +++ N Sbjct: 63 MIQSYFNSYNVDWNANINNMKASDYAKKLALDNVVDFKIQLSKAKAAKTALTKKETDDFN 122 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + + + + + + + + Y + E+ Sbjct: 123 TNMNSYLNSLAATTAEQEKIIKNETGFTLSQFKSFYNNVSIVRKFSSQTQSSYKTTDTEL 182 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 K+ + + + S +N + K AE++ ++ + Sbjct: 183 KKFYDSNKDKFYKVIVGHILFLSNDENNQSTPQKDAEAKKKAEDTLKKVNEPNCDFAALV 242 Query: 224 SKIHDV-----SIGKAQYLLESDLHPQFQNLLKKSQNNT--TNPYVTQKGVEYIAICDKR 276 ++ + GK + P+F+N S T T G + + Sbjct: 243 KELSEDPGSVEKGGKYTVMKNHQYVPEFENWAVDSSRKVGDTGIVKTSYGYHVMKLM--- 299 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + LK + + + + + K Sbjct: 300 KVYSFTQLKDDIKSGYISKRYDDDLNAWRKD 330 >gi|296812781|ref|XP_002846728.1| peptidyl-prolyl cis-trans isomerase ssp-1 [Arthroderma otae CBS 113480] gi|238841984|gb|EEQ31646.1| peptidyl-prolyl cis-trans isomerase ssp-1 [Arthroderma otae CBS 113480] Length = 218 Score = 50.4 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 7/110 (6%), Positives = 23/110 (20%), Gaps = 1/110 (0%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + R + + ++ + + Sbjct: 58 AEGKIRASHLLIKHRESRRPSSWRESEITRSKSEAIEILRGHQKRIEAGEASLGDIATSE 117 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + G + ++ +F+ ++ T GV I Sbjct: 118 SDCSSARKRGDLGFFGRGEMQAEFEQAAFALKVGQVSDIVETASGVHLIE 167 >gi|195952796|ref|YP_002121086.1| SurA domain [Hydrogenobaculum sp. Y04AAS1] gi|195932408|gb|ACG57108.1| SurA domain [Hydrogenobaculum sp. Y04AAS1] Length = 316 Score = 50.4 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 89/284 (31%), Gaps = 25/284 (8%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 + +R+ +INGE I + D+ + + K+A++ LI L Q + ++ Sbjct: 56 TPGVLVNRVVASINGEPILESDLKIAMVYFGTKDA-----KLALKRLIDIYLIYQYLSEN 110 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + + ++ A L+ E L KQGI F+ +L + + Sbjct: 111 HMATPESFLDQTIKDLASQNNLTVEQLYEELKKQGISPKEFRDFLRKEILATAGFGEYLR 170 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 +I K K + + ++ +KL + Sbjct: 171 KAVKITPSDIELLKLKYGKPKIERDIELLIVPKKDKDKL-------------SKLLNGTT 217 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273 K ++ + + DL + K+ + + + Sbjct: 218 SLKTIASKLNLTPQELE------VAKGDLKKNLDEQVWKASKGDIVFAEGKNNIYIAKVK 271 Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + + I L + K++K E + KL+ + I + Sbjct: 272 NIKLVYQNIDLDKL-KKKLLEEKMKKKYDEILHKLKKESYIKVF 314 >gi|311032420|ref|ZP_07710510.1| molecular chaperone lipoprotein [Bacillus sp. m3-13] Length = 97 Score = 50.4 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 2/77 (2%) Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 L + N + P + G I + DK+D +KA L + +K+ + Sbjct: 1 MLPEFEEAAYSLEVNEISEPVESMYGFHIIKVTDKKDKEPFEDMKAELKEEVLLSKVNEE 60 Query: 301 E--AEYVKKLRSNAIIH 315 V+K NA I Sbjct: 61 ASVDTAVQKELDNANIK 77 >gi|227543912|ref|ZP_03973961.1| peptidylprolyl isomerase [Lactobacillus reuteri CF48-3A] gi|300909659|ref|ZP_07127120.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus reuteri SD2112] gi|227186113|gb|EEI66184.1| peptidylprolyl isomerase [Lactobacillus reuteri CF48-3A] gi|300893524|gb|EFK86883.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus reuteri SD2112] Length = 312 Score = 50.4 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 31/284 (10%), Positives = 77/284 (27%), Gaps = 33/284 (11%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 LI + A ++ T +G IT+ + + K +Q++I Sbjct: 6 LIAIIAGAALMMPLAACGNKAVATTSGGKITESEYYSSMKQTSA-------GKQVLQQMI 58 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 ++ + +++ K + + + + + F YL Q Sbjct: 59 LDKVLEKQYGKEV--------------------SDKQVNAQYNTYKNEYGSDFNAYLQSQ 98 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 ++ +K +++ + ++ + Sbjct: 99 NLTEKSLKQQIRSNLLLTAA-ARHYSHITNKQINKQWTKYQPKVQTATILVGSKSDAEDI 157 Query: 202 IKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL--LESDLHPQFQNLLKKSQNN-- 256 I +S + + + + GK ++ L ++ K + Sbjct: 158 INQLNDSSNKYKTFKKLAKSKSTDSQTKNNGGKLPAFDNTDNQLDSAYKKAAFKLKTGEY 217 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 TT P T G + I + + G + L Q + Sbjct: 218 TTTPVKTDDGYQVIYMIEHPAKGKKSQHINDLKNQIVQENMNNQ 261 >gi|23010100|ref|ZP_00050908.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Magnetospirillum magnetotacticum MS-1] Length = 287 Score = 50.4 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 48/166 (28%), Gaps = 18/166 (10%) Query: 1 MTSKVFTSLSDFI-KLLTTYFVLIIFCIVPIVSYKSW--AMSSRIRTTINGEVITDGDIS 57 M + + ++ K++ T + V I + + SS T+ I+ ++ Sbjct: 1 MLQSIRNASQHWLGKVVLTVIFTFLIAGVAIFGVEEFFRGGSSSTVATVGKTPISAEEVR 60 Query: 58 KRIALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + LE+ + +LI E Q+ G+ V Sbjct: 61 TAYQNQLQRYQAQLKRTLTPDQARSLGLERQVLSQLITEAALDQKTTDLGLAVSDAAVLR 120 Query: 105 FFV--QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 +N + + + Q G N +S+ + Sbjct: 121 AIQDEPSFKNANGTFDRVLFYQTLQRAGLNEAMFVREQRSVIARLQ 166 >gi|51849615|dbj|BAD42337.1| trypsin [Nannochloris bacillaris] Length = 299 Score = 50.4 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 9/135 (6%), Positives = 35/135 (25%), Gaps = 6/135 (4%) Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + + + + + +R +P + Sbjct: 50 ILKQHLPMKRSFTSTISASSSSSPSPTSGISSDDPNRQVRVSHILLPPGSESTIEDFKS- 108 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY 261 + ++ ++ G ++ + +F+ + ++ + Sbjct: 109 -----QILNGTATLETLAKEHSTCPSASRGGDIGWIQKGRTVREFEIAAYSTPKDSFSTC 163 Query: 262 VTQKGVEYIAICDKR 276 T+ GV I + ++R Sbjct: 164 TTKFGVHLIQVKEER 178 >gi|121702709|ref|XP_001269619.1| peptidyl-prolyl cis-trans isomerase [Aspergillus clavatus NRRL 1] gi|119397762|gb|EAW08193.1| peptidyl-prolyl cis-trans isomerase [Aspergillus clavatus NRRL 1] Length = 126 Score = 50.4 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 27/85 (31%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K +F+ G + + L+ F+ + + Sbjct: 43 EKFSKKEEALEKLRNGAKFDEVAREFSED-KARQGGSLGWKVRGSLNGDFEKAAYDLEPS 101 Query: 257 TTN-P----YVTQKGVEYIAICDKR 276 TT P T G I + ++ Sbjct: 102 TTASPKYVEVKTGFGYHIIMVEGRK 126 >gi|157124569|ref|XP_001654110.1| rotamase [Aedes aegypti] gi|108873956|gb|EAT38181.1| rotamase [Aedes aegypti] Length = 159 Score = 50.4 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 8/113 (7%), Positives = 26/113 (23%), Gaps = 1/113 (0%) Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + A Q + + R + + + ++ + Sbjct: 43 SPEQDTAEVQCAHLLVKHKGSRRPSSWREDNITRSKSEALGILEGYRKQIQSGEVTLPEL 102 Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 ++++ G + F+ ++ T G+ I Sbjct: 103 AQQYSDCSSAKRGGDLGMFKRGMMQKPFEEAAFALKVGEMSDIVDTDSGLHLI 155 >gi|149370006|ref|ZP_01889857.1| peptidyl-prolyl cis-trans isomerase [unidentified eubacterium SCB49] gi|149356497|gb|EDM45053.1| peptidyl-prolyl cis-trans isomerase [unidentified eubacterium SCB49] Length = 701 Score = 50.4 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 33/351 (9%), Positives = 84/351 (23%), Gaps = 61/351 (17%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + SK+ I ++ + V S + TIN ++ D ++ Sbjct: 3 ILSKIRQKTVFLIVIIAMALFAFVLADVLKNGGGSSNKAQTRVATINDTELSQADFMAQV 62 Query: 61 ALLKLQKINGELE----KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 + Q + + L ++E EK GI + + ++ + L Sbjct: 63 QSTQQQMGPTATTASAVNVVWDREVKRVLLQEEFEKLGIRIEKDQLDAALAEGLAGNQLF 122 Query: 117 AEDFSSFLDKQGIGDN----------HFKQYLAIQSIWPDVVKNDFMLKYGN------LE 160 + F + + + + V++ ++M E Sbjct: 123 TNELGLFDRNRMNEYISDMKLNNPAAYQQWLTYENGVIQSVLELNYMNMIKGGLKSTLAE 182 Query: 161 MEIPANKQKMKNITVREYLIRTVLF------------SIPDNKLQNQGFVQKRIKDAEES 208 E K ++ T + S ++ + + + + Sbjct: 183 GEQQYRYDNDKINFQYVHVPYTSINDTEVAVSEDEIKSYVNDHAADFEVEAQTDIEYVKF 242 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQ----------------------------YLLES 240 + ++ + K + Y + Sbjct: 243 DEIASDEDIAAQEASLKEFLTAGKDNGADRVAFKDAENPEVYVNDYSDFTYVDRWYFSKD 302 Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 P PY + +KR L + +++ + Sbjct: 303 IPAPLTAADSDLEVGEVVGPYKNVTNFNLTRVLEKRQL-ADSVQTSHIQVK 352 Score = 42.7 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 7/89 (7%), Positives = 25/89 (28%), Gaps = 2/89 (2%) Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLES-DLHPQFQNLLK 251 + ++ + + + + G+ YL + L + Sbjct: 367 KEEAKKRADSIFNVVKRSPSTFAEVASATTDDVRNKANGGELGYLNPNVQLPETISEFVL 426 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 ++ T+ G + + D +++ Sbjct: 427 QADKGDMKLVETEFGYHVLHVTDVKNIQP 455 >gi|118576368|ref|YP_876111.1| parvulin-like peptidyl-prolyl isomerase [Cenarchaeum symbiosum A] gi|3599386|gb|AAC62692.1| peptidyl-prolyl cis/trans isomerase [Cenarchaeum symbiosum] gi|118194889|gb|ABK77807.1| parvulin-like peptidyl-prolyl isomerase [Cenarchaeum symbiosum A] Length = 92 Score = 50.4 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 19/68 (27%), Gaps = 2/68 (2%) Query: 206 EESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 +E K ++ + G Y + F++ + + P + Sbjct: 22 QERLKAGEKFGKLAKELSIDGGSAKRDGSLGYFGRGKMVKPFEDAAFRLQVGEVSEPVKS 81 Query: 264 QKGVEYIA 271 + G I Sbjct: 82 EFGYHVIK 89 >gi|42521883|ref|NP_967263.1| peptidyl-prolyl cis-trans isomerase C [Bdellovibrio bacteriovorus HD100] gi|39574413|emb|CAE77917.1| peptidyl-prolyl cis-trans isomerase C [Bdellovibrio bacteriovorus HD100] Length = 90 Score = 50.4 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 9/66 (13%), Positives = 18/66 (27%), Gaps = 2/66 (3%) Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN--PYVTQK 265 + ++++ G E + F+ + N T P T+ Sbjct: 22 ALKSGKTFEELAQRYSQCPSARVGGDLGVFAEGRMDEVFEEAAFALKVNETTLHPVRTRF 81 Query: 266 GVEYIA 271 G I Sbjct: 82 GYHIIR 87 >gi|331246221|ref|XP_003335744.1| hypothetical protein PGTG_16979 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309314734|gb|EFP91325.1| hypothetical protein PGTG_16979 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 124 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 24/80 (30%), Gaps = 8/80 (10%) Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN------T 257 +A + + + G ++ + FQ + Q + Sbjct: 46 EAIARLKSGVSFDKVASELSED-KARNGGSLGWMTRGSMVGPFQEAAFQLQTSSVGSPIF 104 Query: 258 TNP-YVTQKGVEYIAICDKR 276 T+P T G I + +++ Sbjct: 105 TDPAIKTNFGYHVIMVEERK 124 >gi|68160702|gb|AAY86797.1| lr0370 [Lactobacillus reuteri] Length = 312 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 31/284 (10%), Positives = 76/284 (26%), Gaps = 33/284 (11%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 LI + A ++ T +G IT+ + + K +Q++I Sbjct: 6 LIAIIAGAALMMPLAACGNKAVATTSGGKITESEYYSSMKQTSA-------GKQVLQQMI 58 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 ++ + +++ K + + + + F YL Q Sbjct: 59 LDKVLEKQYGKEV--------------------SDKQVNAQYNTYKNEYGADFNAYLQSQ 98 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 ++ +K +++ + ++ + Sbjct: 99 NLTEKSLKQQIRSNLLLTAA-ARHYSHITNKQINKQWTKYQPKVQTATILVGSKSDAEDI 157 Query: 202 IKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL--LESDLHPQFQNLLKKSQNN-- 256 I +S + + + + GK ++ L ++ K + Sbjct: 158 INQLNDSSNKYKTFKKLAKSKSTDSQTKNNGGKLPAFDNTDNQLDSAYKKAAFKLKTGEY 217 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 TT P T G + I + + G + L Q + Sbjct: 218 TTTPVKTDDGYQVIYMIEHPAKGKKSQHINDLKNQIVQENMNNQ 261 >gi|303242616|ref|ZP_07329091.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acetivibrio cellulolyticus CD2] gi|302589824|gb|EFL59597.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acetivibrio cellulolyticus CD2] Length = 471 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 36/287 (12%), Positives = 81/287 (28%), Gaps = 17/287 (5%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLK----------KQEIEK 92 + GE + + + L+ A QE I + + I K Sbjct: 56 VLKVGGEFVDKKLFQDEKSQIYLKVDKQADLMQASQEEIDDRILSAVIDDAVVNNFLINK 115 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 SG ++ + + ++ + EDF FL + +A + V D Sbjct: 116 SGKQVTEAEIDEYIKVYIKSKYDNDEDFKVFLTTSDYESEDELRDVAKLFLLKLKVMPDI 175 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 +YG + N++ ++ N+ ++ + + Sbjct: 176 AAEYGITVTDKELNEEYESFKAANTEYTFRHIYIS--NEKKSDQEALNLANNIYKQLSEG 233 Query: 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 +K++ + G +Y+ S ++ + + P + G Sbjct: 234 ADFKELAKKYSDDQDTKNNGGLNEYVPFSSINEELKAAYSNAKVGELIAPVKMKSGYNIA 293 Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIE-KHEAEYVKKLRSNAIIHY 316 I +I E E+++K++S I Sbjct: 294 LIEHIGKFYPDIESYK--KNMLLSKFNESDKYKEWLEKIKSQETIEI 338 >gi|164425050|ref|XP_957324.2| hypothetical protein NCU06433 [Neurospora crassa OR74A] gi|157070769|gb|EAA28088.2| predicted protein [Neurospora crassa OR74A] Length = 131 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 28/79 (35%), Gaps = 6/79 (7%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 + ++A +++ + G + + L P+F+ + ++T++ Sbjct: 51 KKEEALAKIRDGADFGAVAREYSED-KARTGGSLGWKQKGTLDPEFEKVAFALETSSTSS 109 Query: 260 P----YVTQKGVEYIAICD 274 P TQ G I + Sbjct: 110 PKIGEVKTQFGYHIIMVEG 128 >gi|154491017|ref|ZP_02030958.1| hypothetical protein PARMER_00934 [Parabacteroides merdae ATCC 43184] gi|154088765|gb|EDN87809.1| hypothetical protein PARMER_00934 [Parabacteroides merdae ATCC 43184] Length = 712 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 24/241 (9%), Positives = 59/241 (24%), Gaps = 16/241 (6%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 ++ DI K K ++ + +K ++ D + + Sbjct: 239 VSKSDIEKLYNQ----------RKELFKQKEGKVIKYIAVDIRPSKEDYDKASAEIESLK 288 Query: 111 RNTGLSAEDFSSFLDKQGIGDNH-FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 S + + I F A+ VK + E + Sbjct: 289 SELATSEKVADLVTENSEIPYMDAFFTENALDPEMKQFVKTANVGDVYGPVFENDKYRLF 348 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 V + N K + +++++ Sbjct: 349 KLVDKTVAPDSVKVSHIMLANTGDEAAIKAKADSL-LNVLKKGGDFVALAKEYSADQAAE 407 Query: 230 SIGKAQYLLESD----LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 G+ + E+ ++ F+ + + N + + G I + DK + + Sbjct: 408 KGGELGWFTEATALRGVNDDFKKAVFSTPVNDYSIVKSLYGTHIIKVTDKTTNVDKYKVA 467 Query: 286 A 286 Sbjct: 468 D 468 >gi|326436433|gb|EGD82003.1| peptidylprolyl cis/trans isomerase [Salpingoeca sp. ATCC 50818] Length = 168 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 16/147 (10%), Positives = 36/147 (24%), Gaps = 7/147 (4%) Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV------LF 185 + VK F +K E P +Q+ K +T L + + Sbjct: 19 PTLPPNWVERMSRSRGVKYYFNVKTKESRWERPEPEQEKKTVTASHILCKHRDSRRPSSW 78 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 + + + K ++ + + G + Sbjct: 79 REQNITRTKEEAIDIIKKHRQDIVDGKVTFEDVARTESDCSSAKRGGDLGPFTHDKMQKP 138 Query: 246 FQNLLKK-SQNNTTNPYVTQKGVEYIA 271 F + ++ ++ GV I Sbjct: 139 FADAAFALEVGELSDVVISDSGVHIIK 165 >gi|317033797|ref|XP_001395465.2| peptidyl-prolyl cis-trans isomerase ssp-1 [Aspergillus niger CBS 513.88] Length = 189 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 7/109 (6%), Positives = 24/109 (22%), Gaps = 1/109 (0%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + R + + + ++ + + Sbjct: 78 EGKIRCSHLLVKHRESRRPSSWREAEITRSKEEAIEILRGHEARINAGEASLGDIAVSES 137 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + +++ +F++ + T GV I Sbjct: 138 DCSSARKRGDLGFFGRNEMQKEFEDAAFALQPGQVSGIVETASGVHLIE 186 >gi|134080181|emb|CAK46161.1| unnamed protein product [Aspergillus niger] Length = 177 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 7/109 (6%), Positives = 24/109 (22%), Gaps = 1/109 (0%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + R + + + ++ + + Sbjct: 66 EGKIRCSHLLVKHRESRRPSSWREAEITRSKEEAIEILRGHEARINAGEASLGDIAVSES 125 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + +++ +F++ + T GV I Sbjct: 126 DCSSARKRGDLGFFGRNEMQKEFEDAAFALQPGQVSGIVETASGVHLIE 174 >gi|325123356|gb|ADY82879.1| peptidyl-prolyl cis-trans isomerase precursor [Acinetobacter calcoaceticus PHEA-2] Length = 97 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 6/78 (7%), Positives = 24/78 (30%), Gaps = 1/78 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 + ++ + +++++ G+ + + L P ++ + Sbjct: 12 KDKDLAEQLKKKLQSGAADFAKLAKQYSTCNSAKRGGELGEVKKGQLVPVIDKVVFTAAE 71 Query: 256 NT-TNPYVTQKGVEYIAI 272 P +Q G + + Sbjct: 72 RVLQGPIKSQFGYHLLEV 89 >gi|310801080|gb|EFQ35973.1| ppic-type ppiase domain-containing protein [Glomerella graminicola M1.001] Length = 181 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 10/92 (10%), Positives = 25/92 (27%), Gaps = 1/92 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + D + ++ E+ + + G Y + Sbjct: 84 RPSSWREADITRSKEEALEIIKAHEEKIKSGQTTLGELALTESDCSSARKRGDLGYFGKG 143 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 D+ +F++ + + T G+ I Sbjct: 144 DMQKEFEDAAFGLNPGEISTIVETASGLHLIE 175 >gi|195490069|ref|XP_002092987.1| GE21032 [Drosophila yakuba] gi|194179088|gb|EDW92699.1| GE21032 [Drosophila yakuba] Length = 370 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 17/151 (11%), Positives = 42/151 (27%), Gaps = 9/151 (5%) Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + + R + P K Q + K ++ + + + + Sbjct: 122 FRCSHILVKHVESDRCSSYRQPVVKRTRQEALNKILQASYLVESGESEFASLARTMSDCC 181 Query: 227 HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 G L + F+ + + + ++ + T G + + + K Sbjct: 182 SARHGGDLGPLRLAQTSFSFEENILRLNTPEVSDIFQTNAGYHILW---RTPVDYRKRHK 238 Query: 286 AYLSAQNTPTKIEK-----HEAEYVKKLRSN 311 L TK +K + +Y+ L Sbjct: 239 RGLKQLINATKRKKSKTHLVKNKYLSSLLRK 269 >gi|104782217|ref|YP_608715.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas entomophila L48] gi|95111204|emb|CAK15924.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase) [Pseudomonas entomophila L48] Length = 91 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 7/76 (9%), Positives = 19/76 (25%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++ +KF++ G + L ++ K Sbjct: 11 KTADEAEKLKQRIANGEAFDVLAKKFSTCPSGKRGGDLGEVRPGQLVGAIDQVIFKKPLR 70 Query: 257 TT-NPYVTQKGVEYIA 271 P ++ G + Sbjct: 71 VVHGPIKSKFGYHLVQ 86 >gi|315038920|ref|YP_004032488.1| peptidylprolyl isomerase [Lactobacillus amylovorus GRL 1112] gi|325957341|ref|YP_004292753.1| peptidylprolyl isomerase [Lactobacillus acidophilus 30SC] gi|312277053|gb|ADQ59693.1| peptidylprolyl isomerase [Lactobacillus amylovorus GRL 1112] gi|325333906|gb|ADZ07814.1| peptidylprolyl isomerase [Lactobacillus acidophilus 30SC] Length = 301 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 24/313 (7%), Positives = 81/313 (25%), Gaps = 41/313 (13%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + ++K + + + + S S+ + G IT + Sbjct: 1 MKSYMKKIAAVVAVAGVALST--AACSNGGSNSTVASYKGGKITQQQYYDEMK------- 51 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + K + +I+ +Q+ K + + + + + + + Sbjct: 52 KSQAGKSTLANMIINRALEQQYGKYVSSKKVDKQYNNYKKQYGSQFSAVLQQNGMTASSF 111 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 +++ +++ + + + + ++ +L Sbjct: 112 -----------KENLKTNLLSEQALKHIKKISKKQEQQAW---KSYQPKVTVQHIL---- 153 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL--LESDLHPQ 245 + + + + +K++ GK ++ L Sbjct: 154 -------VAKKSTAQSIIKQLKDGKSFKSLAKKYSLDTATKNKAGKLPAFDSTDNTLDSS 206 Query: 246 FQNLLKK-SQNNT-TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-- 301 F+ K + P +Q G I + G K + + + + Sbjct: 207 FKTAAFKLKTGEVTSTPVKSQSGYHVIKMISHPAKGKFADHKKAIDDEIYASMAQDQATM 266 Query: 302 AEYVKKLRSNAII 314 + + + A + Sbjct: 267 KDVISTVLKRADV 279 >gi|156048410|ref|XP_001590172.1| hypothetical protein SS1G_08936 [Sclerotinia sclerotiorum 1980] gi|154693333|gb|EDN93071.1| hypothetical protein SS1G_08936 [Sclerotinia sclerotiorum 1980 UF-70] Length = 179 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 16/167 (9%), Positives = 45/167 (26%), Gaps = 4/167 (2%) Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL---EMEIPA 165 T S F + Q I + + + +N + + G+ + E Sbjct: 10 WEVRTSKSKNIPYYFNEAQTISSWEPPANTDTEKLKAYMAENYSVSEIGDSANGQDENHG 69 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + + R + + + + ++ R + + + Sbjct: 70 KIRASHLLVKHKGSRRPSSWREAEITRTKEEAMSIILQHEAHIRSGSTSLGDLAVRESDC 129 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 +G + D+ +F+ ++ T G+ I Sbjct: 130 SSARKMGDLGFFGRGDMQKEFEEAAFALKPGEVSHVVETASGLHLIE 176 >gi|312131757|ref|YP_003999097.1| ppic-type peptidyl-prolyl cis-trans isomerase [Leadbetterella byssophila DSM 17132] gi|311908303|gb|ADQ18744.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leadbetterella byssophila DSM 17132] Length = 709 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 13/136 (9%), Positives = 36/136 (26%), Gaps = 12/136 (8%) Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ-YLLESDLHPQFQN 248 + + +K+ + +F S G + + + F++ Sbjct: 362 MTQEQRDEAKKKALEILAQAKSGMDFAFLARQFGSDGTAQQGGDLGSFKNDGTMVKAFED 421 Query: 249 LLKKSQNNTTNP--YVTQKGVEYIAICDKRD----LGGEIALKAYLSAQNTPTKIEKHEA 302 + P T G + + + + I + ++ + + +K Sbjct: 422 AIFSFSGTGVLPNLVTTDFGYHIVKVTEPKSNLKYKLATITKELHVGDEGSNLVFQKASE 481 Query: 303 EY-----VKKLRSNAI 313 +K L A Sbjct: 482 LMNSAKSIKDLEEAAK 497 Score = 43.9 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 25/257 (9%), Positives = 67/257 (26%), Gaps = 16/257 (6%) Query: 4 KVFTSLSDFIKLLTTYFVLIIFC--IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 K+ + ++ +L I V +S ING I + + Sbjct: 6 KIREKSGVAVVVIAIALILFIVGGDFVAGSKGGGLFGNSNAVGEINGTTIDFQQFANLVE 65 Query: 62 LLKLQ-----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 ++Q + ++ + ++LI E + + E GIT + Sbjct: 66 GQRMQYEASVGRSANEQEQAQIREQVWEKLIFEHVYSEAFEDLGITVSDEELREMVQGPK 125 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFK---QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + FS + ++ ++F + ++ Sbjct: 126 NIHPFVKQQFSDQNGNFDATTHANFIAAYANNSMPAEQRIMWDNFKRELRDVRKREKYAN 185 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + + + + ++ + +V ++ + + K + Sbjct: 186 LLNSSSYITKAEAKAEYYNTTNKASGKYLYVPFYSVADSTVKVSDGEIKSYFSKHKDDFN 245 Query: 228 DVSIGKAQYLLESDLHP 244 Y+ S L Sbjct: 246 AYDSRSLVYVTFSLLPT 262 >gi|331086144|ref|ZP_08335226.1| hypothetical protein HMPREF0987_01529 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406303|gb|EGG85817.1| hypothetical protein HMPREF0987_01529 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 353 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 24/308 (7%), Positives = 78/308 (25%), Gaps = 38/308 (12%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI----------------------N 69 + S + TI GE +T G + + + Sbjct: 22 AGCGSVKDSDVVVTIGGEKVTVGVANFFARYQQAEYETYYSGVMGEDMWSTEISKGKSYE 81 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 ++ ++ L + + + + + + + Sbjct: 82 ETVKNQILETLENMYVLEDHMGDYKVEITEEEKKKISEAAKAFDEANGLEEKEAVSGTTE 141 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + IQ + D + + E + + ++T + T Sbjct: 142 NVERMLTLVTIQEKMQKAMVADVDTEVSDEEAAQKSMQYVNLSLTKTKEDGSTEQM---- 197 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + +K+ + +++ ++ ++ + + E+ + Sbjct: 198 -TEEEKAEAKKKAEAFQKAVKEGADFARTAKE-----KELEVKTMTFDEETTTPDEGLMT 251 Query: 250 LKKS--QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + T G + + D A K ++ + EK + ++ Sbjct: 252 KANKLGEGEVSEVIETDSGYYVLKVTSLLDREATDAEKESIA----EERKEKQYKDLCEE 307 Query: 308 LRSNAIIH 315 + + I Sbjct: 308 WKKDVKIE 315 >gi|195482278|ref|XP_002101983.1| GE17920 [Drosophila yakuba] gi|194189507|gb|EDX03091.1| GE17920 [Drosophila yakuba] Length = 169 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 12/165 (7%), Positives = 34/165 (20%), Gaps = 1/165 (0%) Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + + E +S N + + K + P Sbjct: 1 MPDSEQLPEGWEKRTSRSTGMSYYLNVYTKESQWDQPTEPAKKTGGAGGASAGSGDAPDE 60 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 Q + + + R + + + + + ++ Sbjct: 61 VQCLHLLVKHKGSRRPSSWREANITRTKEEAQLLLEVYRNKIVQQEATFDELARAYSDCS 120 Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 G + F++ K + + G+ I Sbjct: 121 SAKRGGDLGRFGRGQMQAAFEDAAFKLNVGQLSGIVDGDSGLHII 165 >gi|332295221|ref|YP_004437144.1| hypothetical protein Thena_0367 [Thermodesulfobium narugense DSM 14796] gi|332178324|gb|AEE14013.1| hypothetical protein Thena_0367 [Thermodesulfobium narugense DSM 14796] Length = 178 Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 2/124 (1%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAV 77 VL+ F +V +V K ++ T+NG IT + L K N +L+K + Sbjct: 4 IVLLCFVLVFVVMVKPSFADDKVLATVNGTSITQSQVDAIYNNLPPNVDKTNPDLKKEIL 63 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 LI + E +K G+ D + + D + Sbjct: 64 NRLIENLVLLDEAKKEGLENDPKVIEAINNAKNEILINYLLQKHFAGQNFDVTDADVTNF 123 Query: 138 LAIQ 141 Sbjct: 124 YNQN 127 >gi|325281113|ref|YP_004253655.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Odoribacter splanchnicus DSM 20712] gi|324312922|gb|ADY33475.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Odoribacter splanchnicus DSM 20712] Length = 708 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 24/255 (9%), Positives = 65/255 (25%), Gaps = 11/255 (4%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 +++G+I + + E KI + ++ V+ Sbjct: 228 VSNGEIKEYYNKHQKSFEQPESRKIV-------YVNFDIEPSGEDFSETEGAVNDLVKEF 280 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + E + DK+ + + +A S+ + N+ +E A K Sbjct: 281 EESADPLEFVNLSSDKKADRNYFKQDEIANDSMAQFLFNNE--KAVFGPYLENNAYKISR 338 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDV 229 + + Q+ + + + + V Sbjct: 339 VASVKMLPDSVRARHILIAPQNQDYAQAKNIADSLAGLLRKGADFEELAKTNSVDQNSAV 398 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK-RDLGGEIALKAYL 288 + G + + F + ++ N +TQ G + + D + + Sbjct: 399 NGGDLGWFTSRTMVQPFSDSAFFAKKNDIKVVLTQYGAHVLQVTDMAKPVKKIQIATVEK 458 Query: 289 SAQNTPTKIEKHEAE 303 + + + Sbjct: 459 EVSPSAKTTNQIYND 473 >gi|27597140|dbj|BAC55134.1| EpsD [Methylobacillus sp. 12S] Length = 234 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 20/267 (7%), Positives = 69/267 (25%), Gaps = 47/267 (17%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKIN 69 F+K FV ++ + + + S ++ ++G+ I+ +++ + + Sbjct: 3 FMK--KAVFVAMVVALAACGKSEEKSSSGQVAAIVDGKEISVLQLNQAMKNMPNVTADNA 60 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + K + L+ + + + + + + ++ Sbjct: 61 DAVRKQLLDRLVDQQVVLNKALEEKVERSAEVISSI------------------------ 96 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV--REYLIRTVLFSI 187 + + I + N + ++ A + + Y ++ + Sbjct: 97 ------EAAKREIITRAYLTNMVSSRIKPSPQQVKAYFDGHPELFSARKVYNLQDIALPP 150 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + +R K +E L K + + Sbjct: 151 GTAIPDELKALVERSKGLQEVAEWLKSQNVKFGASSYS-----------RPAEQVPTDAL 199 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICD 274 +LK ++ + + Sbjct: 200 AVLKDQKDGAVLIVPMDGNPHIVKLIG 226 >gi|326469572|gb|EGD93581.1| peptidyl-prolyl cis-trans isomerase [Trichophyton tonsurans CBS 112818] gi|326478902|gb|EGE02912.1| peptidyl-prolyl cis-trans isomerase ssp-1 [Trichophyton equinum CBS 127.97] Length = 178 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 7/109 (6%), Positives = 24/109 (22%), Gaps = 1/109 (0%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + R + + ++ + + + + Sbjct: 67 EGKIRASHLLIKHRESRRPSSWRESEITRSKDEAIEILRNHKQRIQSGEASLGDIATSES 126 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ +F+ ++ T GV I Sbjct: 127 DCSSARKRGDLGFFGRGEMQAEFEQAAFALKVGEVSDIVETASGVHLIE 175 >gi|323453848|gb|EGB09719.1| hypothetical protein AURANDRAFT_16091 [Aureococcus anophagefferens] Length = 116 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 7/63 (11%), Positives = 14/63 (22%), Gaps = 1/63 (1%) Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVE 268 R + + G + + P F+ + + GV Sbjct: 52 RREDLFKELAKAQSDCGSAKKGGDLGFFRRGKMSPPFEVAAFNLDVGELSKTVASSSGVH 111 Query: 269 YIA 271 I Sbjct: 112 LIY 114 >gi|169632503|ref|YP_001706239.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase) [Acinetobacter baumannii SDF] gi|169794825|ref|YP_001712618.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase) [Acinetobacter baumannii AYE] gi|184159400|ref|YP_001847739.1| parvulin-like peptidyl-prolyl isomerase [Acinetobacter baumannii ACICU] gi|213157847|ref|YP_002320645.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB0057] gi|215482372|ref|YP_002324554.1| Peptidyl-prolyl cis-trans isomerase C [Acinetobacter baumannii AB307-0294] gi|239501754|ref|ZP_04661064.1| peptidyl-prolyl cis-trans isomerase precursor [Acinetobacter baumannii AB900] gi|260557192|ref|ZP_05829408.1| peptidyl-prolyl cis-trans isomerase C [Acinetobacter baumannii ATCC 19606] gi|301345444|ref|ZP_07226185.1| peptidyl-prolyl cis-trans isomerase precursor [Acinetobacter baumannii AB056] gi|301510337|ref|ZP_07235574.1| peptidyl-prolyl cis-trans isomerase precursor [Acinetobacter baumannii AB058] gi|301595025|ref|ZP_07240033.1| peptidyl-prolyl cis-trans isomerase precursor [Acinetobacter baumannii AB059] gi|332852279|ref|ZP_08434084.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii 6013150] gi|332870502|ref|ZP_08439266.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii 6013113] gi|332876240|ref|ZP_08444015.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii 6014059] gi|169147752|emb|CAM85615.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase) [Acinetobacter baumannii AYE] gi|169151295|emb|CAO99993.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase) [Acinetobacter baumannii] gi|183210994|gb|ACC58392.1| Parvulin-like peptidyl-prolyl isomerase [Acinetobacter baumannii ACICU] gi|193078274|gb|ABO13238.2| peptidyl-prolyl cis-trans isomerase precursor [Acinetobacter baumannii ATCC 17978] gi|213057007|gb|ACJ41909.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB0057] gi|213985865|gb|ACJ56164.1| Peptidyl-prolyl cis-trans isomerase C [Acinetobacter baumannii AB307-0294] gi|260409298|gb|EEX02600.1| peptidyl-prolyl cis-trans isomerase C [Acinetobacter baumannii ATCC 19606] gi|322509312|gb|ADX04766.1| ppiC [Acinetobacter baumannii 1656-2] gi|323519339|gb|ADX93720.1| peptidyl-prolyl cis-trans isomerase precursor [Acinetobacter baumannii TCDC-AB0715] gi|332729409|gb|EGJ60749.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii 6013150] gi|332732239|gb|EGJ63507.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii 6013113] gi|332735512|gb|EGJ66564.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii 6014059] Length = 96 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 6/68 (8%), Positives = 22/68 (32%), Gaps = 1/68 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT-TNPYVTQ 264 ++ +++++ G+ + + L P ++ + P +Q Sbjct: 21 KKKLQSGADFAKLAKQYSTCNSAKRGGELGEVKKGQLVPVIDKVVFTAAERVLQGPIKSQ 80 Query: 265 KGVEYIAI 272 G + + Sbjct: 81 FGYHLLEV 88 >gi|295660186|ref|XP_002790650.1| peptidyl-prolyl cis-trans isomerase ssp1 [Paracoccidioides brasiliensis Pb01] gi|34979129|gb|AAQ83700.1| peptidyl-prolyl cis/trans isomerase [Paracoccidioides brasiliensis] gi|226281525|gb|EEH37091.1| peptidyl-prolyl cis-trans isomerase ssp1 [Paracoccidioides brasiliensis Pb01] Length = 190 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 9/110 (8%), Positives = 26/110 (23%), Gaps = 1/110 (0%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + R + + + ++ + E R + Sbjct: 78 ADGKIRASHLLIKHQGSRRPSSWREAEITRSKEEALEILRRHEESIRSGEKTLGDIAMSE 137 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + G + ++ +F+ + T GV I Sbjct: 138 SDCSSARKRGDLGFFGRGEMQAEFEEAAFALEPGQVSGIVETASGVHLIE 187 >gi|78063929|ref|YP_373837.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. 383] gi|77971814|gb|ABB13193.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. 383] Length = 236 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 32/276 (11%), Positives = 72/276 (26%), Gaps = 55/276 (19%) Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 D+ + Q + ++ + +LI L +Q EK+ Sbjct: 1 MQADVDTLLRA-SGQPDSPQIRQAIKNQLITRVLVQQAAEKANYADKPEVKAAV------ 53 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 Q + ++++ + E + + Sbjct: 54 ------------------------QQAKANAEVQLYLRDNVKPEPVTEEQVKARYDELVA 89 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 + EY R ++ P ++ +++ + Sbjct: 90 TLGKNEYKPRLIIVQDPVTAATVLSELKA-----------GKSFEGLARQYSMAPSRDTG 138 Query: 232 GKAQYL---------LESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRD--L 278 G+ ++ S L L+K + T++ + + KR + Sbjct: 139 GELPWVSFHTPVTEGKTSGLPLPIAQALEKLKVGAATSDSIPVDGVRAIVKLDAKRPTQV 198 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 G K L Q +EK A+ + L +A I Sbjct: 199 PGFATAKPGLQQQLQAAAVEKASAQMIGNLLKDAKI 234 >gi|324526000|gb|ADY48617.1| Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Ascaris suum] Length = 148 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 9/67 (13%), Positives = 19/67 (28%), Gaps = 1/67 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 EE+ K ++F+ G + F++ ++ T Sbjct: 79 EEATDMKAKFKELAKEFSDCSSAKRGGDLGMFKRRQMQKPFEDAAFALKVGELSDIVETD 138 Query: 265 KGVEYIA 271 G+ I Sbjct: 139 SGLHLIY 145 >gi|325277728|ref|ZP_08143294.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas sp. TJI-51] gi|324097138|gb|EGB95418.1| peptidyl-prolyl cis-trans isomerase C [Pseudomonas sp. TJI-51] Length = 91 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 6/76 (7%), Positives = 19/76 (25%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++ +KF++ G + + ++ K Sbjct: 11 KTADEAEKLKQRIANGEAFDVLAKKFSTCPSGKRGGDLGEVRPGQMVGAIDQVIFKKPLR 70 Query: 257 TT-NPYVTQKGVEYIA 271 P ++ G + Sbjct: 71 VVHGPIKSKFGYHLVQ 86 >gi|242207385|ref|XP_002469546.1| predicted protein [Postia placenta Mad-698-R] gi|220731350|gb|EED85195.1| predicted protein [Postia placenta Mad-698-R] Length = 143 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 12/119 (10%), Positives = 34/119 (28%), Gaps = 2/119 (1%) Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + E+ + + ++ V+ R N +++ + ++ E P Sbjct: 21 DSVWDPPTELTQEQVRASHLLVKHRGSRRPSSWKEQNITRSKEEAIEILRGYEAEIDGSP 80 Query: 214 KDC-NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + + + G + F++ + ++ T GV I Sbjct: 81 ERFGELARQHSDCSSHAKDGDLGSFGPGQMQKPFEDATYALNVGQISDIVDTDSGVHLI 139 >gi|260548864|ref|ZP_05823086.1| peptidyl-prolyl cis-trans isomerase C [Acinetobacter sp. RUH2624] gi|293611035|ref|ZP_06693334.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|260408032|gb|EEX01503.1| peptidyl-prolyl cis-trans isomerase C [Acinetobacter sp. RUH2624] gi|292826687|gb|EFF85053.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 96 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 6/68 (8%), Positives = 22/68 (32%), Gaps = 1/68 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT-TNPYVTQ 264 ++ +++++ G+ + + L P ++ + P +Q Sbjct: 21 KKKLQSGADFAKLAKQYSTCNSAKRGGELGEVKKGQLVPVIDKVVFTAAERVLQGPIKSQ 80 Query: 265 KGVEYIAI 272 G + + Sbjct: 81 FGYHLLEV 88 >gi|27379919|ref|NP_771448.1| peptidyl-prolyl cis-trans isomerse [Bradyrhizobium japonicum USDA 110] gi|27353072|dbj|BAC50073.1| blr4808 [Bradyrhizobium japonicum USDA 110] Length = 632 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 36/393 (9%), Positives = 91/393 (23%), Gaps = 84/393 (21%) Query: 1 MTSKVFTSLSDFI-KLLTTYFVLIIFCIVPIVSYKSW--AMSSRIRTTINGEVITDGDIS 57 M + + S+++ K + + ++ I I I+ + Sbjct: 1 MLRGMRKASSNWLGKTIMAVVMGVLIISFGIWGIADIFRGFGQSTVAKIGRTEISLNEFR 60 Query: 58 K----RIALLKLQKING---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + R+ + Q L++ +Q+ I E +E + G+ + + Sbjct: 61 QIYTDRLQQISRQFGRPLTPDQARAFGLDRQVLQQTIAEAALDEEARRLGLGQSDDQIRQ 120 Query: 105 FFVQHARNTG----LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV------------- 147 + G A F + + G + + S+ + Sbjct: 121 VIMNDPNFKGVGGSFDANRFQAVIRNFGYTEQRYVSEQRKVSLRRQLTGTIGAGLEPPKA 180 Query: 148 --------------------------------------VKNDFMLKYGNLEMEIPANKQK 169 D +++ E A Sbjct: 181 MIDVLTRFQNEQRAIEFARLDAAQAGTIDAPSPEALAAYFEDHKVQFRAPEYRKIAFVVI 240 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + + ++ +++ ++ + + + E+ A + Sbjct: 241 SPEEIGKWSEVSDEDAKKLFDQRKDRLGTPEKRQIHQIVFPNAAEAQTARERLAGGMSFE 300 Query: 230 SIG----------KAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 +G + +S L P + P + G + + Sbjct: 301 DLGKERGLSASDVDLGLVTKSSLDPAVGDAAFALPAGEISQPIQGRLGTAIVKVDKIEPG 360 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 A A L + V LR Sbjct: 361 V--EANYASLVGDIKREIATERARVKVADLRDK 391 >gi|262278967|ref|ZP_06056752.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter calcoaceticus RUH2202] gi|262259318|gb|EEY78051.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter calcoaceticus RUH2202] Length = 621 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 55/194 (28%), Gaps = 4/194 (2%) Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 D N FKQ ++ + V + E E+ T ++ Sbjct: 204 ASNQEATDYYNKHQNEFKQQASVDVDYVVVSPSLMAKPAPATEAELQQ-AYSKFVETQKK 262 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY- 236 RTV + ++ QK K+ +F+ + G Sbjct: 263 DAKRTVKHILITTDARDDAAAQKLAKEVYAKIQGGLTFAQAASQFSEDPSSKAKGGLVEA 322 Query: 237 LLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAIC-DKRDLGGEIALKAYLSAQNTP 294 F + ++ + P TQ G I + A KA L+A+ Sbjct: 323 YAPGVFSDAFDKTVVSLKNGQISQPVKTQYGYHIIEAETQANQIPSFEAEKARLTAEVEK 382 Query: 295 TKIEKHEAEYVKKL 308 K+ ++ V L Sbjct: 383 NKVATVYSDTVNSL 396 Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 23/305 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 T + ++ + L +V I Y + + + T+NG+ I+ D+ Sbjct: 1 MESFRTVIKGWLGKVLLILFLTPLALVGIEGYFNRGNKADVAKTVNGQEISKKDLETLTQ 60 Query: 62 LLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQ 108 K Q ++ A+ L+ L Q+ EK GI+ + Sbjct: 61 SYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDTQIEQMLAQQP 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + G ++ + + Q ++ + F ++++ Sbjct: 121 SLQENGQFSQKLYENYLRSIGMTSQGLISSLRQDHALKMLTSTFSDYSLVSKVDLMQIAN 180 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + NQ K E + + D + + S + Sbjct: 181 LQTEQRTLHLASIKLDGYKTGLTASNQEATDYYNKHQNEFKQQASVDVDYVVVSPSLMAK 240 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + E++L + ++ + + + D RD L + Sbjct: 241 PAP-----ATEAELQQAYSKFVETQKKDAKRTVK-----HILITTDARDDAAAQKLAKEV 290 Query: 289 SAQNT 293 A+ Sbjct: 291 YAKIQ 295 >gi|169796089|ref|YP_001713882.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase) [Acinetobacter baumannii AYE] gi|213157178|ref|YP_002319223.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB0057] gi|215483544|ref|YP_002325763.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii AB307-0294] gi|301347497|ref|ZP_07228238.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii AB056] gi|301511279|ref|ZP_07236516.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii AB058] gi|169149016|emb|CAM86893.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase) [Acinetobacter baumannii AYE] gi|213056338|gb|ACJ41240.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB0057] gi|213987782|gb|ACJ58081.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii AB307-0294] Length = 621 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 57/233 (24%), Gaps = 7/233 (3%) Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 L+ + Q + + + S ++ + + +K Sbjct: 168 SLVSKVDLMQIANLQTEQRTLHLASIKLDPYKAGLTASNQEATDYYNKHQNEFKQPASVD 227 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + + A + + + R V + ++ Sbjct: 228 VDYVVLSPSLMAKPAPATDAELKQAYAKFVETQQKDAK----RIVKHILITTDARDDAAA 283 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 QK KD +F+ G + F + +L Sbjct: 284 QKLAKDVYAKIQGGLSFAQAAAQFSEDPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQ 343 Query: 257 TTNPYVTQKGVEYIAIC-DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + P TQ G I + A K L A+ K+ ++ V L Sbjct: 344 ISQPVKTQYGYHIIEAETQANQIPSFEAEKPRLIAEVEKNKVASVYSDTVNSL 396 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 33/319 (10%), Positives = 83/319 (26%), Gaps = 23/319 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 T + ++ + L +V I Y + + + T+NG+ I+ D+ Sbjct: 1 MESFRTVIKGWLGKVLLVLFLTPLALVGIEGYFNRGNKADVAKTVNGQDISKKDLETLTQ 60 Query: 62 LLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQ 108 K Q ++ A+ L+ L Q+ EK GI+ + Sbjct: 61 RYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDAQIEQMLAQQP 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + G ++ + + Q ++ + F ++++ Sbjct: 121 SLQENGQFSQKLYENYLRSIGMTSEGLIASLRQDHALKMLTSTFADYSLVSKVDL-MQIA 179 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 ++ +L L + + + + + Sbjct: 180 NLQTEQRTLHLASIKLDPYKAGLTASNQEATDYYNKHQNEFKQPASVDVDYVVLSPSLMA 239 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 +++L + ++ Q + + D RD L + Sbjct: 240 KPA----PATDAELKQAYAKFVETQQKDAKRIVK-----HILITTDARDDAAAQKLAKDV 290 Query: 289 SAQNTPTKIEKHEAEYVKK 307 A+ A + Sbjct: 291 YAKIQGGLSFAQAAAQFSE 309 >gi|145484021|ref|XP_001428033.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124395116|emb|CAK60635.1| unnamed protein product [Paramecium tetraurelia] Length = 115 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 7/79 (8%), Positives = 20/79 (25%), Gaps = 1/79 (1%) Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 + + + + L ++ + G + QF+++ Sbjct: 33 SDADAEKGIREIRAQVENNLNLFAKIAQERSECSSCQKGGDLGDFTRGQMQKQFEDVAFA 92 Query: 253 -SQNNTTNPYVTQKGVEYI 270 + P + G I Sbjct: 93 LKVGELSQPVKSDSGWHII 111 >gi|82701375|ref|YP_410941.1| hypothetical protein Nmul_A0241 [Nitrosospira multiformis ATCC 25196] gi|82409440|gb|ABB73549.1| hypothetical protein Nmul_A0241 [Nitrosospira multiformis ATCC 25196] Length = 330 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 19/292 (6%), Positives = 62/292 (21%), Gaps = 53/292 (18%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-----LEKIAVQELIVETLKKQE 89 S +S++ +N I+ ++ +A N + + + L+ + L Sbjct: 36 SSQPASQVAAKVNSGEISVHQLNYVLARATRNSANSPENASRIRREVLDRLVDQEL---- 91 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 + E + + + + ++ Sbjct: 92 --------------------------AVEQAINKKLDRSPEVLMALDNARREILARAYLE 125 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK----RIKDA 205 E + + + +P + + + + Sbjct: 126 QITAATPKPTVEEAKTYYSEHPQLFAERRIYNIQEIVLPSSAGVADELREMLDSGKPMED 185 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 L+ + + + + + Sbjct: 186 IAKWLKGKDIKFAAGSA-------------TRSAEQIPLEILPKIHPLKPGQGLLIQGPQ 232 Query: 266 GVEYIAICDKRDLGGEIALK-AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + I + A + + + +K L++ A I Y Sbjct: 233 SITLMRIAAAQTAPITEAAALPRIQQFLGNQRAAEAARGEIKALKAKANITY 284 >gi|303289267|ref|XP_003063921.1| predicted protein [Micromonas pusilla CCMP1545] gi|226454237|gb|EEH51543.1| predicted protein [Micromonas pusilla CCMP1545] Length = 115 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 6/76 (7%), Positives = 18/76 (23%), Gaps = 1/76 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 + + + E + K + G + + F++ Sbjct: 36 AAMDELMAYKAEIDAGNVTFADLAAKVSDCSSAKHGGDLGFFGPGKMQKAFEDGAFALEV 95 Query: 255 NNTTNPYVTQKGVEYI 270 + + G+ I Sbjct: 96 GAMSGVVDSDSGLHII 111 >gi|301594637|ref|ZP_07239645.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii AB059] Length = 606 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 57/233 (24%), Gaps = 7/233 (3%) Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 L+ + Q + + + S ++ + + +K Sbjct: 153 SLVSKVDLMQIANLQTEQRTLHLASIKLDPYKAGLTASNQEATDYYNKHQNEFKQPASVD 212 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + + A + + + R V + ++ Sbjct: 213 VDYVVLSPSLMAKPAPATDAELKQAYAKFVETQQKDAK----RIVKHILITTDARDDAAA 268 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 QK KD +F+ G + F + +L Sbjct: 269 QKLAKDVYAKIQGGLSFAQAAAQFSEDPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQ 328 Query: 257 TTNPYVTQKGVEYIAIC-DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + P TQ G I + A K L A+ K+ ++ V L Sbjct: 329 ISQPVKTQYGYHIIEAETQANQIPSFEAEKPRLIAEVEKNKVASVYSDTVNSL 381 Score = 40.8 bits (93), Expect = 0.28, Method: Composition-based stats. Identities = 32/304 (10%), Positives = 78/304 (25%), Gaps = 23/304 (7%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------- 67 L +V I Y + + + T+NG+ I+ D+ K Q Sbjct: 1 LLVLFLTPLALVGIEGYFNRGNKADVAKTVNGQDISKKDLETLTQRYKEQYLAAVKGDES 60 Query: 68 --INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQHARNTGLSAEDFSSF 123 ++ A+ L+ L Q+ EK GI+ + + G ++ Sbjct: 61 LLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDAQIEQMLAQQPSLQENGQFSQKLYEN 120 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + + Q ++ + F ++++ ++ +L Sbjct: 121 YLRSIGMTSEGLIASLRQDHALKMLTSTFADYSLVSKVDL-MQIANLQTEQRTLHLASIK 179 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 L + + + + + +++L Sbjct: 180 LDPYKAGLTASNQEATDYYNKHQNEFKQPASVDVDYVVLSPSLMAKPA----PATDAELK 235 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 + ++ Q + + D RD L + A+ A Sbjct: 236 QAYAKFVETQQKDAKRIVK-----HILITTDARDDAAAQKLAKDVYAKIQGGLSFAQAAA 290 Query: 304 YVKK 307 + Sbjct: 291 QFSE 294 >gi|322698790|gb|EFY90557.1| peptidyl-prolyl cis/trans isomerase [Metarhizium acridum CQMa 102] Length = 198 Score = 49.7 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 8/92 (8%), Positives = 22/92 (23%), Gaps = 1/92 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + ++ + + + + G Y Sbjct: 101 RPSSWRESEITRSKDEAMEIIKAHEAKIKSGAISLGDLAPTESDCSSARKRGDLGYFGRG 160 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 D+ +F++ + T G+ I Sbjct: 161 DMQKEFEDAAFALKPGEMSGVVETASGLHLIE 192 >gi|220928200|ref|YP_002505109.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium cellulolyticum H10] gi|219998528|gb|ACL75129.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium cellulolyticum H10] Length = 347 Score = 49.7 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 33/330 (10%), Positives = 100/330 (30%), Gaps = 39/330 (11%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRI-------RTTINGEVITDGDISKRIALLKLQ 66 + + + + I+ + ++ + + I+ + + + Sbjct: 3 RKFVNALITVAMVLTSIIPASNTFAATAKTATPETHVAKVGTDKISKEEYNFFLRDAISM 62 Query: 67 KIN-------------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-- 105 + +KIA+ ++ ++ + + + IT N ++ F Sbjct: 63 IQSYFNSYNVDWNAKINDMKASEYAKKIALDNIVDFKIQLSKAKDAKITLTKNEMDEFNG 122 Query: 106 -FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + + + +D + + + + ++ K+ + E+ Sbjct: 123 NMNSYLNSLASTTKDQENIIKNETGFTLAQFKSFYNNVYIVRKFASETQKKFNCTDTELK 182 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 KN+ + + + + +N + K AEE+ L++ + Sbjct: 183 KYYNSNKNLFYKVVVGHILFLTTDENNQSTPKKEAEAKKKAEETLLKINSPNSDFAALVK 242 Query: 225 KIHDV-----SIGKAQYLLESDLHPQFQNLLKKSQNNT--TNPYVTQKGVEYIAICDKRD 277 ++ + + GK + + P+FQN T T G + + Sbjct: 243 ELSEDPGSKETGGKYTVMNNNQFVPEFQNWAVNPSRKVGDTGIIKTSYGFHVMKLM---K 299 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + LK+ + + K + + + + K Sbjct: 300 IYSFNQLKSDIKSSYIIKKYDDNLSAWRKD 329 >gi|294810228|ref|ZP_06768893.1| hypothetical protein CW3_4061 [Bacteroides xylanisolvens SD CC 1b] gi|294442585|gb|EFG11387.1| hypothetical protein CW3_4061 [Bacteroides xylanisolvens SD CC 1b] Length = 327 Score = 49.7 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 21/206 (10%), Positives = 60/206 (29%), Gaps = 5/206 (2%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL--LKLQKINGELEKIAVQE 79 +F + I + + +NGE I +++ + + E++ + Sbjct: 3 FFLFSFLFIACNTPVINKNDVVAEVNGEQILLSELASQSKQEIFDILNTAYEIKSRVLAG 62 Query: 80 LIVETLKKQEIEKSGITFD---SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 LI + L + +K ++ + V + + +G K Sbjct: 63 LIKQKLLEDAAKKENMSLEEFIDWFVQQKICVGQDSLKKRYGFNTQSFYVKGELIPLVKG 122 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 L + + +++ + + + K+ + E ++R + N Sbjct: 123 SLEEKLSYQQKLRSRIVQALVDSLYQKADIKRFLYPPKQPECVVRDLCVYYRGNLDSPVS 182 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKF 222 F+ + E + + Sbjct: 183 FIVASDYNCERCVQFEKTLSKLYDNY 208 >gi|322508302|gb|ADX03756.1| ppiD [Acinetobacter baumannii 1656-2] Length = 601 Score = 49.7 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 57/233 (24%), Gaps = 7/233 (3%) Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 L+ + Q + + + S ++ + + +K Sbjct: 148 SLVSKVDLMQIANLQTEQRTLHLASIKLDPYKAGLTASDQEATDYYNKHQNEFKQPASVD 207 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + + A + + + R V + ++ Sbjct: 208 VDYVVLSPSLMAKPAPATDAELKQAYAKFVETQQKDAK----RIVKHILITTDARDDAAA 263 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 QK KD +F+ G + F + +L Sbjct: 264 QKLAKDVYAKIQGGLSFAQAAAQFSEDPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQ 323 Query: 257 TTNPYVTQKGVEYIAIC-DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + P TQ G I + A K L A+ K+ ++ V L Sbjct: 324 ISQPVKTQYGYHIIEAETQANQIPSFEAEKPRLIAEVEKNKVASVYSDTVNSL 376 Score = 36.6 bits (82), Expect = 5.1, Method: Composition-based stats. Identities = 31/296 (10%), Positives = 78/296 (26%), Gaps = 23/296 (7%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK-----------INGELE 73 +V I Y + + + T+NG+ I+ D+ K Q ++ Sbjct: 4 LALVGIEGYFNRGNKADVAKTVNGQDISKKDLETLTQRYKEQYLAAVKGDESLLNLPVIQ 63 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQHARNTGLSAEDFSSFLDKQGIGD 131 A+ L+ L Q+ EK GI+ + + + G ++ + Sbjct: 64 AKALDILVSRNLLIQQAEKLGISLSNAQIEQMLAQQPSLQENGQFSQKLYENYLRSIGMT 123 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + Q ++ + F ++++ ++ +L L Sbjct: 124 SEGLIASLRQDHALKMLTSTFADYSLVSKVDL-MQIANLQTEQRTLHLASIKLDPYKAGL 182 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + + + + + +++L + ++ Sbjct: 183 TASDQEATDYYNKHQNEFKQPASVDVDYVVLSPSLMAKPA----PATDAELKQAYAKFVE 238 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 Q + + D RD L + A+ A + Sbjct: 239 TQQKDAKRIVK-----HILITTDARDDAAAQKLAKDVYAKIQGGLSFAQAAAQFSE 289 >gi|225872276|ref|YP_002753731.1| hypothetical protein ACP_0603 [Acidobacterium capsulatum ATCC 51196] gi|225791583|gb|ACO31673.1| hypothetical protein ACP_0603 [Acidobacterium capsulatum ATCC 51196] Length = 245 Score = 49.7 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 54/151 (35%), Gaps = 13/151 (8%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKR-----IALLKLQKINGELEKIA----VQEL 80 + S + R+ +NG+V+ D+ + + L+ +++ A ++ L Sbjct: 25 AAASGSPVVLDRVIAIVNGQVLLQSDVDEERRLSALEPLRNSAGPESIDQAARHLILRTL 84 Query: 81 IVETLKKQEIEKSGITF----DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 ++E +K+Q+ + + + A + S E ++ FL K G+ + + Sbjct: 85 VLEQMKEQDQPTTVSQKWTQRGLTELRGTMTRCAPYSCTSQEGWALFLKKHGLTEGEAEA 144 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + + + F +I Sbjct: 145 RWSQRMAIERFIDLRFRAGIHITREQIDTYY 175 >gi|303243162|ref|ZP_07329598.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acetivibrio cellulolyticus CD2] gi|302589297|gb|EFL59109.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acetivibrio cellulolyticus CD2] Length = 461 Score = 49.7 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 32/258 (12%), Positives = 70/258 (27%), Gaps = 11/258 (4%) Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITF--DSNTVNYFFVQHARNTGLSAEDFSS 122 LQK + E + + +LI + + D Y A S E + Sbjct: 83 LQKTDEERNDMFLDQLIEKVVMDDYFANKSNVKVSDEEVNAYVAKYVAPRYSGSEEQTTY 142 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 F + K + + V L + + + ++ +R Sbjct: 143 FQSMGFANEEDMKNTIKDYLLKQQVYYAAATKAGLTLTDKERKDAYEEHKSYNKKVDLRN 202 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESD 241 +L N + + Q+ ++++ + G+ + +L + Sbjct: 203 ILV--AINDKRTKEQAQELANTVYTKLKNGESFEALAKQYSDDSESKENGGQKKNVLPGN 260 Query: 242 LHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI--E 298 + N K P KG E + I + + S K Sbjct: 261 NETDYDNAVFKAEAGQLLEPIYLAKGYEIVKIE---KVTDFYHPEEEYSQTVLVEKFLNS 317 Query: 299 KHEAEYVKKLRSNAIIHY 316 E+ + ++ + I Sbjct: 318 DKYKEWFESIKKDYQIEI 335 >gi|302916033|ref|XP_003051827.1| hypothetical protein NECHADRAFT_79295 [Nectria haematococca mpVI 77-13-4] gi|256732766|gb|EEU46114.1| hypothetical protein NECHADRAFT_79295 [Nectria haematococca mpVI 77-13-4] Length = 132 Score = 49.7 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 27/85 (31%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A K +F+ G + + L P+F+ + + Sbjct: 49 EKHAKKEEALAKLNEGVKFDEVAREFSED-KARQGGSLGWKTKGSLDPKFEEAAFVLETS 107 Query: 257 TTNP-----YVTQKGVEYIAICDKR 276 TT T+ G I + ++ Sbjct: 108 TTASPKFVEVKTEFGYHIIMVEGRK 132 >gi|242212427|ref|XP_002472047.1| predicted protein [Postia placenta Mad-698-R] gi|220728870|gb|EED82755.1| predicted protein [Postia placenta Mad-698-R] Length = 149 Score = 49.7 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 8/91 (8%), Positives = 22/91 (24%), Gaps = 1/91 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + ++ E + + + G Sbjct: 57 RPSSWKEQNITRSKEEAIEILRGYEAEIDGSPERFGELARQHSDCSSHAKDGDLGSFGPG 116 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + F++ + ++ T GV I Sbjct: 117 QMQKPFEDATYALNVGQISDIVDTDSGVHLI 147 >gi|169621117|ref|XP_001803969.1| hypothetical protein SNOG_13763 [Phaeosphaeria nodorum SN15] gi|160704180|gb|EAT78787.2| hypothetical protein SNOG_13763 [Phaeosphaeria nodorum SN15] Length = 395 Score = 49.7 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 15/174 (8%), Positives = 35/174 (20%), Gaps = 7/174 (4%) Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + + + + L K + +I Sbjct: 221 EVRRSNTKNLPYYFHPETKDSRWEPPAGTDPEKLKEFMAANHSSKGVAPANFTQTGDKIR 280 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD------AEESRLRLPKDCNK 218 A +K+ R + + + + AE + Sbjct: 281 AAHLLVKHRDSRRPASWREPKITRSKSEAEELIKKYQSQILAFEAPAEHNDPNPKSLSEL 340 Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + G + D+ +F+N + T G+ I Sbjct: 341 ATTESDCSSARKGGDLGFFGHGDMQKEFENAAFDLKPGGVSEIVDTASGLHLIQ 394 >gi|114778306|ref|ZP_01453165.1| peptidyl-prolyl cis-trans isomerase C1 [Mariprofundus ferrooxydans PV-1] gi|114551408|gb|EAU53964.1| peptidyl-prolyl cis-trans isomerase C1 [Mariprofundus ferrooxydans PV-1] Length = 99 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 8/62 (12%), Positives = 17/62 (27%), Gaps = 1/62 (1%) Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270 K++ G + L +N++ K P +Q G + Sbjct: 34 GADFAALARKYSLCPSKKRGGDLGEIYPGQLVRPIENVIFKQPLLKLHGPVKSQFGYHLV 93 Query: 271 AI 272 + Sbjct: 94 IV 95 >gi|56752198|ref|YP_172899.1| hypothetical protein syc2189_d [Synechococcus elongatus PCC 6301] gi|81300715|ref|YP_400923.1| hypothetical protein Synpcc7942_1906 [Synechococcus elongatus PCC 7942] gi|56687157|dbj|BAD80379.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81169596|gb|ABB57936.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 246 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 20/264 (7%), Positives = 68/264 (25%), Gaps = 32/264 (12%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 + + + D++ + + + EL+ + GI + + Sbjct: 14 VGDREVQESDLAALLQ-----------KHQLLPELVKR--MRFAQVIEGIEVQPDVLEQE 60 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + G++ + L +Q I + + + + +F + N ++ + Sbjct: 61 CQAWCKQNGIAPQQLPQLLAQQQISLEQWMSSVENRLRLRLFQEREFSHRAENRFLKRKS 120 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + +R + ++ + +F+ Sbjct: 121 QLDLVTYSLLRHSDGHLIQELY------------------QQLLHGEATFEDLATQFSQG 162 Query: 226 IHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 + GK + S + L P + I + + + + Sbjct: 163 HEAKTAGKLGPVPLSQPHPALAEVLRTAQPGQILPPRNLESYWLIIRLDQLQPVAFNETI 222 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKL 308 + + + + + + L Sbjct: 223 RRQMLQELFDEWLGAEVQQTLNTL 246 >gi|195346154|ref|XP_002039632.1| GM23077 [Drosophila sechellia] gi|194134858|gb|EDW56374.1| GM23077 [Drosophila sechellia] Length = 166 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 7/91 (7%), Positives = 20/91 (21%), Gaps = 1/91 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + + + ++ G Sbjct: 72 RPSSWREANITRTKEEAQLLLEVYRNKIVNQEATFEELARSYSDCSSAKRGGDLGKFGRG 131 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + F+ K + N + + G+ I Sbjct: 132 QMQAAFEEAAFKLNVNQLSGIVDSDSGLHII 162 >gi|293608199|ref|ZP_06690502.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828772|gb|EFF87134.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 621 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 56/194 (28%), Gaps = 4/194 (2%) Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 D N FKQ ++ + + + E E+ T ++ Sbjct: 204 ASNQEATDYYNKHQNEFKQQASVDVDYVVLSPSMMTKPAPATEAELQQ-AYAKFVETQKK 262 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 RTV + ++ QK K+ +F+ + G Sbjct: 263 DAKRTVKHILITTDARDDAAAQKLAKEVYAKIQGGLSFAQAASQFSEDPSSKAKGGLVEA 322 Query: 238 LESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC-DKRDLGGEIALKAYLSAQNTP 294 S + + +L + P TQ G I + A KA L+A+ Sbjct: 323 YASGVFSDAFDKTVLSLKNGQVSQPVKTQYGYHIIEAETQANQIPSFEAEKARLTAEVEK 382 Query: 295 TKIEKHEAEYVKKL 308 K+ ++ V L Sbjct: 383 NKVATVYSDAVNSL 396 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 82/305 (26%), Gaps = 23/305 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 T + ++ + L +V I Y + + + T+NG+ I+ D+ Sbjct: 1 MESFRTVIKGWLGKVLLILFLTPLALVGIEGYFNRGNKADVAKTVNGQEISKKDLETLTQ 60 Query: 62 LLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQ 108 K Q ++ A+ L+ L Q+ EK GI+ + Sbjct: 61 SYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDAQIEQMLAQQP 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + G ++ + + Q ++ + F ++++ Sbjct: 121 SLQENGQFSQKLYENYLRSIGMTSQGLIASLRQDHALKMLTSTFADYSLVSKVDL-MQIA 179 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 ++ +L L + + + + + + Sbjct: 180 NLQTEQRTLHLASIKLDAYKTGLTASNQEATDYYNKHQNEFKQQASVDVDYVVLSPSMMT 239 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 E++L + ++ + + + D RD L + Sbjct: 240 KPA----PATEAELQQAYAKFVETQKKDAKRTVK-----HILITTDARDDAAAQKLAKEV 290 Query: 289 SAQNT 293 A+ Sbjct: 291 YAKIQ 295 >gi|325662341|ref|ZP_08150950.1| hypothetical protein HMPREF0490_01689 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471343|gb|EGC74566.1| hypothetical protein HMPREF0490_01689 [Lachnospiraceae bacterium 4_1_37FAA] Length = 353 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 28/306 (9%), Positives = 76/306 (24%), Gaps = 34/306 (11%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI----------------------N 69 + S + TI GE +T G + + + Sbjct: 22 AGCGSVKDSDVVVTIGGEKVTVGVANFFARYQQAEYETYYSGVMGEDMWSTEISKGKSYE 81 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 ++ ++ L + + + + + + + Sbjct: 82 ETVKNQILETLENMYVLEDHMGDYKVEITEEEKKKISEAAKAFDEANGLEEKEAVSGTTE 141 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + IQ + D + + E + + ++T + T Sbjct: 142 NVERMLTLVTIQEKMQKAMVADVDTEVSDEEAAQKSMQYVNLSLTKTKEDGSTEQM---- 197 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + K AE + + ++ + + K +V + Sbjct: 198 ----TEEEKAEAKKKAEAFQKAVKEEADFAKTAKEKELEVKTMTFDEETTTPDEGLMTKA 253 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 K + + T G + + D A K ++ + EK + ++ + Sbjct: 254 NKLGEGEVSEVIETDSGYYVLKVTSLLDREATDAEKESIA----EERKEKQYKDLCEEWK 309 Query: 310 SNAIIH 315 + I Sbjct: 310 KDVKIE 315 >gi|332851740|ref|ZP_08433665.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6013150] gi|332865885|ref|ZP_08436665.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6013113] gi|332729747|gb|EGJ61082.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6013150] gi|332734935|gb|EGJ66021.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6013113] Length = 621 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 57/233 (24%), Gaps = 7/233 (3%) Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 L+ + Q + + + S ++ + + +K Sbjct: 168 SLVSKVDLMQIANLQTEQRTLHLASIKLDPYKTGLTASNQEATDYYNKHQNEFKQPASVD 227 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + + A + + + R V + ++ Sbjct: 228 VDYVVLSPSLMAKPAPATDAELKQAYAKFVETQQKDAK----RIVKHILITTDARDDAAA 283 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 QK KD +F+ G + F + +L Sbjct: 284 QKLAKDVYAKIQGGLSFAQAAAQFSEDPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQ 343 Query: 257 TTNPYVTQKGVEYIAIC-DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + P TQ G I + A K L A+ K+ ++ V L Sbjct: 344 ISQPVKTQYGYHIIEAETQANQIPSFEAEKPRLIAEVEKNKVASVYSDTVNSL 396 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 33/319 (10%), Positives = 83/319 (26%), Gaps = 23/319 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 T + ++ + L +V I Y + + + T+NG+ I+ D+ Sbjct: 1 MESFRTVIKGWLGKVLLVLFLTPLALVGIEGYFNRGNKADVAKTVNGQDISKKDLETLTQ 60 Query: 62 LLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQ 108 K Q ++ A+ L+ L Q+ EK GI+ + Sbjct: 61 RYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDAQIEQMLAQQP 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + G ++ + + Q ++ + F ++++ Sbjct: 121 SLQENGQFSQKLYENYLRSIGMTSEGLIASLRQDHALKMLTSTFADYSLVSKVDL-MQIA 179 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 ++ +L L + + + + + Sbjct: 180 NLQTEQRTLHLASIKLDPYKTGLTASNQEATDYYNKHQNEFKQPASVDVDYVVLSPSLMA 239 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 +++L + ++ Q + + D RD L + Sbjct: 240 KPA----PATDAELKQAYAKFVETQQKDAKRIVK-----HILITTDARDDAAAQKLAKDV 290 Query: 289 SAQNTPTKIEKHEAEYVKK 307 A+ A + Sbjct: 291 YAKIQGGLSFAQAAAQFSE 309 >gi|157110825|ref|XP_001651262.1| peptidyl-prolyl cis/trans isomerase, putative [Aedes aegypti] gi|108883863|gb|EAT48088.1| peptidyl-prolyl cis/trans isomerase, putative [Aedes aegypti] Length = 135 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 25/87 (28%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q +I +A E ++ G + + + FQ+ + Sbjct: 50 EKQGKILEALEKLKEGQSFNVVATNYSED-KARQGGDLGWQIRGAMVGPFQDAAFALPIS 108 Query: 257 TT-------NPYVTQKGVEYIAICDKR 276 T P T+ G I + K+ Sbjct: 109 TINAPKYTDPPIKTKFGYHIIMVEGKK 135 >gi|296283875|ref|ZP_06861873.1| peptidyl-prolyl isomerase [Citromicrobium bathyomarinum JL354] Length = 646 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 32/376 (8%), Positives = 77/376 (20%), Gaps = 84/376 (22%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRI--RTTINGEVITDGDISKRIALLKLQKINGELE- 73 + I F + + S+ S + E +T ++ + Q E Sbjct: 21 FLVLIAIAFAAGDVGNSGSFGGLSGTNSVAVVGDEDVTTAELRQSADNAFRQVQQDEPTL 80 Query: 74 -----------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 + L+ + + G+ N +N + G + Sbjct: 81 SMAEFVEDGGLMQVLDTLLDRVAVSEFGKMLGVRAGENLINSEIRMISAFRGPDGSFSTE 140 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKN-------------------------------- 150 Q + + + Sbjct: 141 AYRAALQQQGLTDQIVRDDLSDGLIAQQVLVPAVFGAKFPDSIVARYATQLREKREGSIA 200 Query: 151 -----DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN----QGFVQKR 201 F K + ++ + +R + ++L + K+ Sbjct: 201 LVPAELFAPKDDPTDKQLQTFYNANRTDFMRPERRQVRYALFGADQLADSVEPTAAEIKK 260 Query: 202 IKDAEESRLRLPKDCNKL--------------EKFASKIHDVSIGK--------AQYLLE 239 D R +D E+ A I + + Sbjct: 261 RYDDNADLYRASEDRTFTQLIVPTRQAAESFRERVADGASLTQIAEEAGLETQQIGPIKR 320 Query: 240 SDLHPQF-----QNLLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQN 292 D Q + + + + G + I D + + ++ Sbjct: 321 EDYAQQANAAVAEAVFSADRGEIAPIARSPLGYHVVRIDDVKTIPARTLAQARDEIADAL 380 Query: 293 TPTKIEKHEAEYVKKL 308 K + E + Sbjct: 381 RADKQRRALTELASDI 396 >gi|255942625|ref|XP_002562081.1| Pc18g02370 [Penicillium chrysogenum Wisconsin 54-1255] gi|211586814|emb|CAP94461.1| Pc18g02370 [Penicillium chrysogenum Wisconsin 54-1255] Length = 129 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K +F+ G + + L P F+N+ + + + Sbjct: 46 EKHAKKEEALEKLRNGTKFDEVAREFSED-KARQGGSLGWKTKGGLDPAFENVAFELETS 104 Query: 257 TTNP-----YVTQKGVEYIAICDKR 276 TT T G I + ++ Sbjct: 105 TTGNPKYAEVKTAFGYHIIMVEGRK 129 >gi|260555138|ref|ZP_05827359.1| ppic-type ppiase domain-containing protein [Acinetobacter baumannii ATCC 19606] gi|260411680|gb|EEX04977.1| ppic-type ppiase domain-containing protein [Acinetobacter baumannii ATCC 19606] Length = 621 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 58/233 (24%), Gaps = 7/233 (3%) Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 L+ + Q + + + S ++ + + +K Sbjct: 168 SLVSKVDLMQIANLQTEQRTLHLASIKLDPYKAGLTASNQEATDYYNKHQNEFKQPASVD 227 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + + A + + + R V + ++ Sbjct: 228 VDYVVLSPSLMAKPAPATDAELKQAYAKFVETQQKDAK----RIVKHILITTDARDDAAA 283 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 QK KD +F+ G + F + +L Sbjct: 284 QKLAKDVYAKIQGGLSFAQAAAQFSEDPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQ 343 Query: 257 TTNPYVTQKGVEYIAIC-DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + P TQ G I + A K+ L A+ K+ ++ V L Sbjct: 344 ISQPVKTQYGYHIIEAETQANQIPSFEAEKSRLIAEVEKNKVASVYSDTVNSL 396 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 33/319 (10%), Positives = 83/319 (26%), Gaps = 23/319 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 T + ++ + L +V I Y + + + T+NG+ I+ D+ Sbjct: 1 MESFRTVIKGWLGKVLLVLFLTPLALVGIEGYFNRGNKADVAKTVNGQDISKKDLETLTQ 60 Query: 62 LLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQ 108 K Q ++ A+ L+ L Q+ EK GI+ + Sbjct: 61 RYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDAQIEQMLAQQP 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + G ++ + + Q ++ + F ++++ Sbjct: 121 SLQENGQFSQKLYENYLRSIGMTSEGLIASLRQDHALKMLTSTFADYSLVSKVDL-MQIA 179 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 ++ +L L + + + + + Sbjct: 180 NLQTEQRTLHLASIKLDPYKAGLTASNQEATDYYNKHQNEFKQPASVDVDYVVLSPSLMA 239 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 +++L + ++ Q + + D RD L + Sbjct: 240 KPA----PATDAELKQAYAKFVETQQKDAKRIVK-----HILITTDARDDAAAQKLAKDV 290 Query: 289 SAQNTPTKIEKHEAEYVKK 307 A+ A + Sbjct: 291 YAKIQGGLSFAQAAAQFSE 309 >gi|258545268|ref|ZP_05705502.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] gi|258519481|gb|EEV88340.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] Length = 610 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 44/121 (36%), Gaps = 5/121 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + ++ I L I + + + ++ T+NG+ + ++ Sbjct: 25 MLEDIREKKTNRITYLLVIIAGIGMLFIGVPYFNHGGETN--IATVNGQEVPLRAYQEQY 82 Query: 61 ALLKLQKI---NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 ++ Q+ +L++ AV+ L+ TL +Q+ S + + + N Sbjct: 83 RDIQQQQPDLSETDLKQRAVRSLVERTLFQQQALNSRYRLPDSALYRIIKEQFGNDENYQ 142 Query: 118 E 118 + Sbjct: 143 Q 143 >gi|261197425|ref|XP_002625115.1| peptidyl-prolyl cis-trans isomerase pin4 [Ajellomyces dermatitidis SLH14081] gi|239595745|gb|EEQ78326.1| peptidyl-prolyl cis-trans isomerase pin4 [Ajellomyces dermatitidis SLH14081] gi|239606739|gb|EEQ83726.1| peptidyl-prolyl cis-trans isomerase pin4 [Ajellomyces dermatitidis ER-3] gi|327354945|gb|EGE83802.1| peptidyl-prolyl cis-trans isomerase pin4 [Ajellomyces dermatitidis ATCC 18188] Length = 131 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K + +F+ G + + LH F+ + + + + Sbjct: 48 EKHSKKEEAAEKLRNGAKFDDVAREFSED-KARQGGSLGWKVRGSLHGDFEKVAYELETS 106 Query: 257 TTN-P----YVTQKGVEYIAICDKR 276 TT P T G I + ++ Sbjct: 107 TTANPKWAEVKTGFGYHIIMVEGRK 131 >gi|255038469|ref|YP_003089090.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dyadobacter fermentans DSM 18053] gi|254951225|gb|ACT95925.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dyadobacter fermentans DSM 18053] Length = 705 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 17/245 (6%), Positives = 53/245 (21%), Gaps = 11/245 (4%) Query: 45 TINGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 ++ + +TD + + ++ K + + I + K N + Sbjct: 218 VVDTTIKVTDAQLEEYLSAHKKEYKGTDTRS------IEYVTFPVQPAKDDSAALYNEIK 271 Query: 104 YFFVQHA-RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 A + + ++ + +++ V + Sbjct: 272 ELARGLATAQSDSAFAAMNTDIPTPINQSYATMSDQLKEAVKTFVPGGVYGPYREGNTYY 331 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + ++ + + K + + + Sbjct: 332 IYKYGGTRSDSVSSAKASHILIRAENQSDSAKTAARVKAEGILAQIKAGANFEALAATSS 391 Query: 223 ASKIHDVSIGKAQYL-LESDLHPQFQNLLKKS--QNNTTNPYVTQKGVEYIAICDKRDLG 279 A G Y + F+ + + +Q G I + + Sbjct: 392 ADPGSAQRGGDLGYFQNNGAMVKPFEEAVFSASAPGLIPRLVESQFGFHIIKVTAPKSNT 451 Query: 280 GEIAL 284 Sbjct: 452 LYRIA 456 >gi|299770348|ref|YP_003732374.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase) [Acinetobacter sp. DR1] gi|298700436|gb|ADI91001.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase) [Acinetobacter sp. DR1] Length = 621 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 55/194 (28%), Gaps = 4/194 (2%) Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 D N FKQ ++ + V + E E+ T ++ Sbjct: 204 ASNQEATDYYNKHQNEFKQQSSVDVDYVVVSPSLMAKPAPATEAELQQ-AYSKFVETQKK 262 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY- 236 RTV + ++ QK K+ +F+ + G Sbjct: 263 DAKRTVKHILITTDARDDAAAQKLAKEVYAKIQGGLTFAQAASQFSEDPSSKAKGGLVEA 322 Query: 237 LLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAIC-DKRDLGGEIALKAYLSAQNTP 294 F + ++ + P TQ G I + A KA L+A+ Sbjct: 323 YAPGVFSDAFDKTVVSLKNGQISQPVKTQYGYHIIEAETQASQIPSFEAEKARLTAEVEK 382 Query: 295 TKIEKHEAEYVKKL 308 K+ ++ V L Sbjct: 383 NKVATVYSDTVNSL 396 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 23/305 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 T + ++ + L +V I Y + + + T+NG+ I+ D+ Sbjct: 1 MESFRTVIKGWLGKVLLILFLTPLALVGIEGYFNRGNKADVAKTVNGQEISKKDLETLTQ 60 Query: 62 LLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQ 108 K Q ++ A+ L+ L Q+ EK GI+ + Sbjct: 61 SYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDTQIEQMLAQQP 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + G ++ + + Q ++ + F ++++ Sbjct: 121 SLQENGQFSQKLYENYLRSIGMTSQGLIASLRQDHALKMLTSTFSDYSLVSKVDLMQIAN 180 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + NQ K E + + D + + S + Sbjct: 181 LQTEQRTLHLASIKLDGYKTGLTASNQEATDYYNKHQNEFKQQSSVDVDYVVVSPSLMAK 240 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + E++L + ++ + + + D RD L + Sbjct: 241 PAP-----ATEAELQQAYSKFVETQKKDAKRTVK-----HILITTDARDDAAAQKLAKEV 290 Query: 289 SAQNT 293 A+ Sbjct: 291 YAKIQ 295 >gi|308804293|ref|XP_003079459.1| peptidyl-prolyl cis-trans isomerase C (ISS) [Ostreococcus tauri] gi|116057914|emb|CAL54117.1| peptidyl-prolyl cis-trans isomerase C (ISS) [Ostreococcus tauri] Length = 181 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 21/64 (32%), Gaps = 1/64 (1%) Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 EK ++ G+ + +F +++ N P TQ G I Sbjct: 113 ATFARVAEKESTCPSSKKGGELGSFRRGQMVREFDDVVFTGDLNTVLGPVDTQFGSHLIL 172 Query: 272 ICDK 275 I D+ Sbjct: 173 ITDR 176 >gi|327303380|ref|XP_003236382.1| peptidyl-prolyl cis-trans isomerase [Trichophyton rubrum CBS 118892] gi|326461724|gb|EGD87177.1| peptidyl-prolyl cis-trans isomerase [Trichophyton rubrum CBS 118892] Length = 178 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 7/109 (6%), Positives = 24/109 (22%), Gaps = 1/109 (0%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + R + + ++ + + + + Sbjct: 67 EGKIRASHLLIKHRDSRRPSSWRESEITRSKDEAIEILRNHKQRIQSGEASLGDIATSES 126 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ +F+ ++ T GV I Sbjct: 127 DCSSARKRGDLGFFGRGEMQAEFEQAAFALKVGEVSDIVETASGVHLIE 175 >gi|166031177|ref|ZP_02234006.1| hypothetical protein DORFOR_00863 [Dorea formicigenerans ATCC 27755] gi|166029024|gb|EDR47781.1| hypothetical protein DORFOR_00863 [Dorea formicigenerans ATCC 27755] Length = 353 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 29/307 (9%), Positives = 79/307 (25%), Gaps = 36/307 (11%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKL-----------------------QKI 68 + T++ I D D++ A + Sbjct: 20 TGCGSLKGDETVATVDDTKI-DADLANFFARYTQATYETYYSAYLGEDMWNSDASDGETY 78 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 ++ ++ L L ++ +E ++ + ++ D + + Sbjct: 79 EESVKSSVLKSLEDMILLEKHMEDYDVSITDEDKAMIKETTQQFLNDNSLDDKNLVSGNE 138 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 N +A+Q ++ + + E + + Y + + Sbjct: 139 KTVNRALTLMAVQQKMRTAIQAGADTEVSDEEAAQKSMDYVFIS-----YQTKDDSGNSK 193 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 D + ++ + + E+ + + ++ S + Sbjct: 194 DVSDDEKAQLKSQAEAIASGLKEGGDLNALAEEQGATVQTLT---FDKDTTSPDEDLIKA 250 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + +T+ T+KG + + +Q + K + VKK Sbjct: 251 ADALGEGESTDVIETEKGCYVAKVTS----LLDRTATDSKKSQIVQERQTKLYDDTVKKW 306 Query: 309 RSNAIIH 315 R A I Sbjct: 307 RKKADIK 313 >gi|242075004|ref|XP_002447438.1| hypothetical protein SORBIDRAFT_06g001060 [Sorghum bicolor] gi|241938621|gb|EES11766.1| hypothetical protein SORBIDRAFT_06g001060 [Sorghum bicolor] Length = 124 Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 6/66 (9%), Positives = 14/66 (21%), Gaps = 1/66 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 + + + + G + F++ + T Sbjct: 55 NQILSGQANFADLAARHSDCSSARRGGDLGTFGRKQMQKPFEDATYALKVGELSEIVDTD 114 Query: 265 KGVEYI 270 GV I Sbjct: 115 SGVHVI 120 >gi|254426795|ref|ZP_05040502.1| hypothetical protein ADG881_25 [Alcanivorax sp. DG881] gi|196192964|gb|EDX87923.1| hypothetical protein ADG881_25 [Alcanivorax sp. DG881] Length = 455 Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 22/280 (7%), Positives = 67/280 (23%), Gaps = 34/280 (12%) Query: 52 TDGDISKRIA-LLKLQKINGE---LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 T D+ +R LK+Q N + + Q+L +E + + SG++ Sbjct: 184 TLWDLYRRQNIQLKVQMHNLNTGFIREAIKQQLTMEYVFYWFDQHSGLSA---------- 233 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 A D + L + + ++ + Sbjct: 234 ------RAIAAVDDCIDDAMSRDELLHDLGLMHDIHDDNPQLRALAAEVSQDQIAAYYQQ 287 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK----FA 223 + + V + + + + K + + ++ Sbjct: 288 HQDEFTRVERVHAYHLRVNSQAEADRIYAELLDVQKAQKAQKADSGDPAIAFADAVARYS 347 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQN--LLKKSQNNTTNPYVTQKG-----VEYIAICDKR 276 G ++ + + + P+ + E + + K Sbjct: 348 VADDREQGGALGWIDRDSREDHWTQALAFVQPVQRVSPPFRSPATDSAPYWELLWVDQKE 407 Query: 277 ---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 +++ + ++++ + A Sbjct: 408 MGYQSVDSESVRYRAAQAIAREQMQQRFQTLLADATEAAT 447 >gi|262281146|ref|ZP_06058928.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter calcoaceticus RUH2202] gi|262257377|gb|EEY76113.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter calcoaceticus RUH2202] Length = 96 Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 6/68 (8%), Positives = 22/68 (32%), Gaps = 1/68 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT-TNPYVTQ 264 ++ +++++ G+ + + L P ++ + P +Q Sbjct: 21 KKKLQSGADFAKLAKQYSTCNSAKRGGELGEVKKGQLVPVIDKVVFTAAERVLQGPIKSQ 80 Query: 265 KGVEYIAI 272 G + + Sbjct: 81 FGYHLLEV 88 >gi|294888970|ref|XP_002772646.1| peptidyl-prolyl cis-trans isomerase pin1, putative [Perkinsus marinus ATCC 50983] gi|239877056|gb|EER04462.1| peptidyl-prolyl cis-trans isomerase pin1, putative [Perkinsus marinus ATCC 50983] Length = 129 Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 23/82 (28%), Gaps = 1/82 (1%) Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 D + + +++ E+ + + + G Y ++ F Sbjct: 26 CHDISISHDEALKEIKDMIEKLKADKSLFPEMAMARSDCGSYKNGGDLGYFDRGEMQRPF 85 Query: 247 QNLLKK-SQNNTTNPYVTQKGV 267 + + P T+ GV Sbjct: 86 EEAAFNLEVGELSGPVETESGV 107 >gi|225710940|gb|ACO11316.1| Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Caligus rogercresseyi] Length = 151 Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 9/91 (9%), Positives = 22/91 (24%), Gaps = 1/91 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + + AE+ + + ++ G Sbjct: 57 RPSSWREENITRSKEEALSILNGYAEKIKSGAETLESLASTYSDCSSAKRGGDLGPFGRK 116 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + F++ + T GV I Sbjct: 117 QMQKPFEDAAFALKVGEMSEAISTDSGVHLI 147 >gi|227892857|ref|ZP_04010662.1| peptidylprolyl isomerase [Lactobacillus ultunensis DSM 16047] gi|227865359|gb|EEJ72780.1| peptidylprolyl isomerase [Lactobacillus ultunensis DSM 16047] Length = 308 Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 33/290 (11%), Positives = 81/290 (27%), Gaps = 39/290 (13%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91 + S + S+ + G IT + + K + +I+ +Q+ Sbjct: 29 AACSNSGSNSTVASYKGGKITQQQYYDEMK-------KSQAGKSTLANMIINRALEQQYG 81 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 K + + FS+ L + G+ + FK+ L + + Sbjct: 82 KYVSSKKVDKQYN------NYKKQYGSQFSAVLQQNGMTASSFKENLKTNLLSEQAL--K 133 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + K + E + ++ +L + + + Sbjct: 134 HIKKVTKSQEEKAWKSY------QPKVTVQHIL-----------VAKKSTAETIIKQLKD 176 Query: 212 LPKDCNKLEKFA-SKIHDVSIGKAQYL--LESDLHPQFQNLLKKSQNN--TTNPYVTQKG 266 + +K++ GK ++ L F+ K T+ P +Q G Sbjct: 177 GKSFSSLAKKYSLDTATKNKAGKLPAFDSTDNTLDSAFKTAAFKLTTGEVTSTPVKSQSG 236 Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314 I + + G K + + + + + + + A + Sbjct: 237 YHVIKMINHPAKGKFADHKKAIDDEIYASMAQDQATMKDVISTVLKRADV 286 >gi|284040856|ref|YP_003390786.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirosoma linguale DSM 74] gi|283820149|gb|ADB41987.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirosoma linguale DSM 74] Length = 706 Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 22/237 (9%), Positives = 52/237 (21%), Gaps = 11/237 (4%) Query: 45 TINGE--VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 TIN +TD + ++ K + + I K + + Sbjct: 217 TINDTTVKVTDSQLEDYLSKHKDEYPGSDSRS------IQYVTFSVAPSKEDSSALYTQI 270 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 T S + + + + +++ P + Sbjct: 271 KSLARGLGAATNDSTFAQQNSDVRVPLYLTAGEMPEQLRAAIPTFAPGGIYGPFREGNTY 330 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 K T +L + ++R + + + Sbjct: 331 FIYKYGGTKRDTNFTARASHILIQTKGLADSAKADARRRAEGILKQIQGGASFEALAQTN 390 Query: 223 ASKIHDVSIGKAQYLL-ESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKR 276 + G Y + F+ + S T+ G I + + Sbjct: 391 SDDGSRSVGGDLGYFKNNGQMVKPFETAVFGATSAGLIPRLVETEFGYHIINVTQPK 447 >gi|302509338|ref|XP_003016629.1| hypothetical protein ARB_04920 [Arthroderma benhamiae CBS 112371] gi|291180199|gb|EFE35984.1| hypothetical protein ARB_04920 [Arthroderma benhamiae CBS 112371] Length = 193 Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 7/109 (6%), Positives = 23/109 (21%), Gaps = 1/109 (0%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + R + + ++ + + + Sbjct: 67 EGKIRASHLLIKHRESRRPSSWRESEITRSKDDAIEILRGHKQRIEAGEASLGDIATSES 126 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ +F+ ++ T GV I Sbjct: 127 DCSSARKRGDLGFFGRGEMQAEFEQAAFALKVGEVSDIVETASGVHLIE 175 >gi|238503942|ref|XP_002383203.1| peptidyl-prolyl cis-trans isomerase [Aspergillus flavus NRRL3357] gi|317138383|ref|XP_003189039.1| peptidyl-prolyl cis-trans isomerase pin4 [Aspergillus oryzae RIB40] gi|220690674|gb|EED47023.1| peptidyl-prolyl cis-trans isomerase [Aspergillus flavus NRRL3357] Length = 122 Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K + +F+ G + + L F+ + + + Sbjct: 39 EKHSKKEEALEKLRNGSKFDDVAREFSED-KARQGGSLGWKVRGSLDGTFEKAAYELEPS 97 Query: 257 TTN-P----YVTQKGVEYIAICDKR 276 TT P T G I + ++ Sbjct: 98 TTANPKYVEVKTGFGYHIIMVEGRK 122 >gi|170721894|ref|YP_001749582.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida W619] gi|169759897|gb|ACA73213.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida W619] Length = 91 Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 6/76 (7%), Positives = 18/76 (23%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++ +K ++ G + L ++ K Sbjct: 11 KTADEAEKLKQRIANGEAFDVLAKKLSTCPSGKRGGDLGEVRPGQLVGAIDQVIFKKPLR 70 Query: 257 TT-NPYVTQKGVEYIA 271 P ++ G + Sbjct: 71 VVHGPIKSKFGYHLVQ 86 >gi|169633493|ref|YP_001707229.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase) [Acinetobacter baumannii SDF] gi|169152285|emb|CAP01195.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase) [Acinetobacter baumannii] Length = 621 Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 58/233 (24%), Gaps = 7/233 (3%) Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 L+ + Q + + + S ++ + + +K Sbjct: 168 SLVSKVDLMQIANLQTEQRTLHLASIKLDPYKTGLTASNQEATDYYNKHQNEFKQPASVD 227 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + + A + + + R V + ++ Sbjct: 228 VDYVVLSPSLMAKPAPATDAELKQAYAKFVETQQKDAK----RIVKHILITTDARDDAAA 283 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 QK KD +F+ G + F + +L Sbjct: 284 QKLAKDVYAKIQGGLSFAQAAAQFSEDPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQ 343 Query: 257 TTNPYVTQKGVEYIAIC-DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + P TQ G I + A K+ L A+ K+ ++ V L Sbjct: 344 ISQPVKTQYGYHIIEAETQANQIPSFEAEKSRLIAEVEKNKVASVYSDTVNSL 396 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 33/319 (10%), Positives = 83/319 (26%), Gaps = 23/319 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 T + ++ + L +V I Y + + + T+NG+ I+ D+ Sbjct: 1 MESFRTVIKGWLGKVLLVLFLTPLALVGIEGYFNRGNKADVAKTVNGQDISKKDLETLTQ 60 Query: 62 LLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQ 108 K Q ++ A+ L+ L Q+ EK GI+ + Sbjct: 61 RYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDAQIEQMLAQQP 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + G ++ + + Q ++ + F ++++ Sbjct: 121 SLQENGQFSQKLYENYLRSIGMTSEGLIASLRQDHALKMLTSTFADYSLVSKVDL-MQIA 179 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 ++ +L L + + + + + Sbjct: 180 NLQTEQRTLHLASIKLDPYKTGLTASNQEATDYYNKHQNEFKQPASVDVDYVVLSPSLMA 239 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 +++L + ++ Q + + D RD L + Sbjct: 240 KPA----PATDAELKQAYAKFVETQQKDAKRIVK-----HILITTDARDDAAAQKLAKDV 290 Query: 289 SAQNTPTKIEKHEAEYVKK 307 A+ A + Sbjct: 291 YAKIQGGLSFAQAAAQFSE 309 >gi|254230430|ref|ZP_04923809.1| peptidyl-prolyl cis-trans isomerase D [Vibrio sp. Ex25] gi|151937031|gb|EDN55910.1| peptidyl-prolyl cis-trans isomerase D [Vibrio sp. Ex25] Length = 273 Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 24/229 (10%), Positives = 59/229 (25%), Gaps = 21/229 (9%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING---- 70 + +++ F + SY ++ + I G+ + + Sbjct: 6 KIILGLIILSFVFAGVGSYIVSGNNNS-AAKVGNTEIPRGEFEMAYQNERNRMQAQLGDY 64 Query: 71 ------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTGL 115 K + +I + L Q+ E G+ V Q N Sbjct: 65 FSQMLADPAYVESFRKSVLDRMINDVLLDQQAEALGLRISDTQVRSMILDMPQFQSNGQF 124 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK-YGNLEMEIPANKQKMKNIT 174 E + + L + G + F +Y+ + + ++ + E++ Sbjct: 125 DQEIYQASLRRAGFSPDSFAEYMRRELVREQLLNALQNSEFILPGEVQAEGKLFTQTRDI 184 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + + K D ++ +L A Sbjct: 185 RTIKIDLAEFAKNIELTDEEIQQYYKANPDNFTRPEQVKVAYIELSAEA 233 >gi|88608000|ref|YP_506608.1| hypothetical protein NSE_0732 [Neorickettsia sennetsu str. Miyayama] gi|88600169|gb|ABD45637.1| hypothetical protein NSE_0732 [Neorickettsia sennetsu str. Miyayama] Length = 307 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 20/166 (12%), Positives = 56/166 (33%), Gaps = 12/166 (7%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL-EKIA 76 + V+ + ++ +S S+++ + + +I++ D+ + + +L Sbjct: 1 MFRVICVVFLLSFLSLPSYSIEVKTAAMVGDVIISNQDVRNYQNFVVMLGEKSDLSYSAV 60 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 ++++I + Q ++ G+ F + + F + Sbjct: 61 LEQMIDLEVCYQYAKRVGLPFSDQKYDAALKHLRALGINHGAHMALFEE----------- 109 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 YL Q +VV + + + A K+++ L R Sbjct: 110 YLKKQVFLSEVVDQIIRPRVRIDDSDFDAIKRELLKKKNTFKLKRI 155 >gi|227818745|ref|YP_002822716.1| hypothetical protein NGR_b05010 [Sinorhizobium fredii NGR234] gi|36958998|gb|AAQ87423.1| Hypothetical protein RNGR00297 [Sinorhizobium fredii NGR234] gi|227337744|gb|ACP21963.1| conserved hypothetical protein [Sinorhizobium fredii NGR234] Length = 291 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 17/167 (10%), Positives = 43/167 (25%), Gaps = 16/167 (9%) Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI------KDAEESR 209 E ++ ++ +E + ++ + +R+ D Sbjct: 112 AEPKEDDLRQFYDAHPDMFRQEARVSFDHVFFSGSRRPDAAAEARRVLAASGGPDQTAII 171 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 + + A K D + + ++ P + G Sbjct: 172 DQGDQWLAAAGLKAGKESD--------IAAQFGPAFARAVVALPTGEWMGPIESAYGQHL 223 Query: 270 IAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + + +KA + AQ + +E Y +L I Sbjct: 224 VRVYEVVPAAGRPFAEVKAEVLAQWRDEQRRNYERRYFAELLKKYEI 270 >gi|328793049|ref|XP_001120560.2| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like, partial [Apis mellifera] Length = 127 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 8/87 (9%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 Q +I +A E K ++ S G ++++ + FQ + Sbjct: 42 EKQSKILEALEKLKAGGKFNEVAAIYSED-KARSGGDLGWMIKGSMVGPFQEAAFALPIS 100 Query: 257 TT-------NPYVTQKGVEYIAICDKR 276 + P T+ G I + K+ Sbjct: 101 SINSPIYTDPPIKTKFGYHIIMVESKK 127 >gi|326798824|ref|YP_004316643.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingobacterium sp. 21] gi|326549588|gb|ADZ77973.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingobacterium sp. 21] Length = 701 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 45/141 (31%), Gaps = 4/141 (2%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + K + R +L + ++ + L+ +F Sbjct: 335 ESAKILDVRNSPDSVTARHILLNPATEGGVDKAMAKADSIK--NLILKGGNFAALAVEFG 392 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 + + G+ + P F+N + ++ TQ GV I + ++ + Sbjct: 393 TDGTKDNGGELGTFARGSMIPAFENAVFDAKPGDVFVLNTQYGVHIIKVDAQKGMS--KV 450 Query: 284 LKAYLSAQNTPTKIEKHEAEY 304 +KA + ++ + E A Y Sbjct: 451 VKAAIIDKSVSSSNETLRAAY 471 >gi|50546849|ref|XP_500894.1| YALI0B14663p [Yarrowia lipolytica] gi|49646760|emb|CAG83145.1| YALI0B14663p [Yarrowia lipolytica] Length = 185 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 6/92 (6%), Positives = 23/92 (25%), Gaps = 1/92 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + + + + + + G + + Sbjct: 91 RPSSWKDANIERTKEEARAILEGHQAKIKAGETTIGDLAVSESDCSSARKRGDLGFFGKG 150 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 ++ +F+ ++ T G+ I Sbjct: 151 EMQAEFEQASFALENGQVSDIVETASGLHLIE 182 >gi|308496066|ref|XP_003110221.1| hypothetical protein CRE_06423 [Caenorhabditis remanei] gi|308245058|gb|EFO89010.1| hypothetical protein CRE_06423 [Caenorhabditis remanei] Length = 162 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 10/116 (8%), Positives = 29/116 (25%), Gaps = 1/116 (0%) Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 +++ + I +K ++ ++ ++ K Sbjct: 44 KGSDLKSVQCLHLLVKHEGSRNPSSWRSDHITRSKEDAINILKNYERELRDASNIEGKFR 103 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + ++F+ G + F++ + T GV I Sbjct: 104 DLAKQFSDCSSAKRGGDLGPFERRQMQKPFEDASFALEVGEMSPIVDTSSGVHLIY 159 >gi|116308872|emb|CAH66008.1| H0613H07.6 [Oryza sativa Indica Group] gi|116317920|emb|CAH65943.1| H0716A07.1 [Oryza sativa Indica Group] Length = 123 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 6/65 (9%), Positives = 15/65 (23%), Gaps = 1/65 (1%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + + + + G + F++ ++ T Sbjct: 55 QILSGRANFADLAARHSDCSSARRGGDLGTFGRRQMQKPFEDATFALKVGEMSDTVDTDS 114 Query: 266 GVEYI 270 GV I Sbjct: 115 GVHII 119 >gi|38344861|emb|CAE01287.2| OSJNBa0020P07.4 [Oryza sativa Japonica Group] gi|125589154|gb|EAZ29504.1| hypothetical protein OsJ_13578 [Oryza sativa Japonica Group] Length = 123 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 6/65 (9%), Positives = 15/65 (23%), Gaps = 1/65 (1%) Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265 + + + + G + F++ ++ T Sbjct: 55 QILSGRANFADLAARHSDCSSARRGGDLGTFGRRQMQKPFEDATFALKVGEMSDTVDTDS 114 Query: 266 GVEYI 270 GV I Sbjct: 115 GVHII 119 >gi|145520387|ref|XP_001446049.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124413526|emb|CAK78652.1| unnamed protein product [Paramecium tetraurelia] Length = 119 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 10/98 (10%), Positives = 25/98 (25%), Gaps = 1/98 (1%) Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 R R + + + +++ E + K + + G Sbjct: 18 QSRNPYDRVRDKQVTRSDADAEKGIREIRAQVENNLNLFAKIAQERSEKRQCSSCQKGGD 77 Query: 234 AQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + QF+++ + P + G I Sbjct: 78 LGDFTRGQMQKQFEDVAFALKVGELSQPVKSDSGWHII 115 >gi|189426095|ref|YP_001953272.1| hypothetical protein Glov_3046 [Geobacter lovleyi SZ] gi|189422354|gb|ACD96752.1| conserved hypothetical protein [Geobacter lovleyi SZ] Length = 531 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 39/137 (28%), Gaps = 2/137 (1%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 V ++ + + K E + + S G + S Sbjct: 386 QVRTTVEQQLRALKAAELAKQKAVEAQKQLAGNGAGLKLQATPAFGYNSKGDLPGIGNSK 445 Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299 + L + + P + + + + K + Q P K E+ Sbjct: 446 PLMEKVFELTTAGATPSEPMLVGNRWYAVRLKQRNAAPQADFAPRKDEVKRQLLPAKQEE 505 Query: 300 HEAEYVKKLRSNAIIHY 316 ++K+LRS A I Y Sbjct: 506 ALRAWLKELRSKAKIVY 522 Score = 45.1 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 22/199 (11%), Positives = 53/199 (26%), Gaps = 23/199 (11%) Query: 1 MTSKVFTS-----LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD 55 M + + ++ F+ IF + + S+ ++ I+ Sbjct: 1 MLDVIRKKKESVVIKAVFVIIVLSFIGTIFLVWGKGD-EGMGRSAGYAAKVDRTTISLEA 59 Query: 56 ISKRIA-------------LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 + L + A+ LI TL + + G++ + Sbjct: 60 YQNAYQNMAETYRQIFGANFTPELEKQLNLRQQAIDRLIDSTLIIKAAKSQGVSVSKEEI 119 Query: 103 NYFFVQH---ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + +N + L I + F++ + + + M K Sbjct: 120 SAAIAGMSAFQQNGSFDFGLYQQMLKANRITPDAFEESKKRELLIEKT-RKAVMDKVVIS 178 Query: 160 EMEIPANKQKMKNITVREY 178 + E K ++ Y Sbjct: 179 DDEALKQFHKEQDKLELSY 197 >gi|313608785|gb|EFR84595.1| foldase protein PrsA [Listeria monocytogenes FSL F2-208] Length = 126 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 3/96 (3%) Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G ++ F+ +++++ + + G I + K + G Sbjct: 5 DTATSTNGGLLDPFGPGEMDETFEKAAYALENKDDVSGIVKSTYGYHLIQLVKKTEKGTY 64 Query: 282 IALKAYLS-AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 KA + A ++ +KK A I Sbjct: 65 AKEKANVKAAYIESQLTTENMTAALKKELKAANIDI 100 >gi|307319050|ref|ZP_07598480.1| conserved hypothetical protein [Sinorhizobium meliloti AK83] gi|306895157|gb|EFN25913.1| conserved hypothetical protein [Sinorhizobium meliloti AK83] Length = 289 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 16/201 (7%), Positives = 45/201 (22%), Gaps = 6/201 (2%) Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 E + K+ D + + D E E+ + ++ Sbjct: 73 NERLMAREAKEMGLDQDDTVIRRRLAQKLRFIVEDTAQLAEPTEAELRQLYEANRSRFET 132 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + + K + + ++L + + Sbjct: 133 PGRLSFKQIYFDPEHRADAAAEAKTVLTELNALGESEPASDRLLLGNRFDDASELAISGM 192 Query: 237 LLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTP 294 F P + G+ + + + +K + A+ Sbjct: 193 FGADFAREVFAV----EPGQWRGPVKSGYGLHLVFVMQRTATTPKPFETVKGDVLAEWRR 248 Query: 295 TKIEKHEAEYVKKLRSNAIIH 315 K + +++ LR + Sbjct: 249 LKQTELSRDFLAALRKKYGVE 269 >gi|156083549|ref|XP_001609258.1| peptidyl-prolyl cis-trans isomerase [Babesia bovis T2Bo] gi|154796509|gb|EDO05690.1| peptidyl-prolyl cis-trans isomerase, putative [Babesia bovis] Length = 187 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 12/121 (9%), Positives = 31/121 (25%), Gaps = 1/121 (0%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 F + + + +K+ R + R + +K + V+ + R Sbjct: 64 FEMAMDHGPSTVRCAHILLKHTGSRNPINRNTNQRVTRSKEEAISMVRDYRNTIMSAPER 123 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + + G + + F N ++ + G+ I Sbjct: 124 DREFRRIATSISECSSASKGGDLGFFSREQMQASFSNAAFNLQVGEISDLVDSDSGIHII 183 Query: 271 A 271 Sbjct: 184 Y 184 >gi|239501895|ref|ZP_04661205.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii AB900] Length = 621 Score = 49.3 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 57/233 (24%), Gaps = 7/233 (3%) Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 L+ + Q + + + S ++ + + +K Sbjct: 168 SLVSKVDLMQIANLQTEQRTLHLASIKLDPYKAGLTASNQEATDYYNKHQNEFKQPASVD 227 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + + A + + + R V + ++ Sbjct: 228 VDYVVLSPSLMAKPAPATDAELKQAYAKFVETQQKDAK----RIVKHILITTDARDDAAA 283 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 QK KD +F+ G + F + +L Sbjct: 284 QKLAKDVYAKIQGGLSFAQAAAQFSEDPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQ 343 Query: 257 TTNPYVTQKGVEYIAIC-DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + P TQ G I + A K L A+ K+ ++ V L Sbjct: 344 ISQPVKTQYGYHIIEAETQANQIPSFEAEKPLLIAEVEKNKVASVYSDTVNSL 396 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 33/319 (10%), Positives = 83/319 (26%), Gaps = 23/319 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 T + ++ + L +V I Y + + + T+NG+ I+ D+ Sbjct: 1 MESFRTVIKGWLGKVLLVLFLTPLALVGIEGYFNRGNKADVAKTVNGQDISKKDLETLTQ 60 Query: 62 LLKLQK-----------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQ 108 K Q ++ A+ L+ L Q+ EK GI+ + Sbjct: 61 RYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDAQIEQMLAQQP 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + G ++ + + Q ++ + F ++++ Sbjct: 121 SLQENGQFSQKLYENYLRSIGMTSEGLIASLRQDHALKMLTSTFADYSLVSKVDL-MQIA 179 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 ++ +L L + + + + + Sbjct: 180 NLQTEQRTLHLASIKLDPYKAGLTASNQEATDYYNKHQNEFKQPASVDVDYVVLSPSLMA 239 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 +++L + ++ Q + + D RD L + Sbjct: 240 KPA----PATDAELKQAYAKFVETQQKDAKRIVK-----HILITTDARDDAAAQKLAKDV 290 Query: 289 SAQNTPTKIEKHEAEYVKK 307 A+ A + Sbjct: 291 YAKIQGGLSFAQAAAQFSE 309 >gi|222629721|gb|EEE61853.1| hypothetical protein OsJ_16521 [Oryza sativa Japonica Group] Length = 200 Score = 49.3 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 8/76 (10%), Positives = 17/76 (22%), Gaps = 1/76 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 E+ K + + + G + F+ + Sbjct: 121 DAADLARALREKIVAGERKFEDVATEESDCNSAKRGGDLGPFERGKMQKAFEKAVLALKV 180 Query: 255 NNTTNPYVTQKGVEYI 270 ++ T GV I Sbjct: 181 GEISDVVDTDSGVHII 196 >gi|218195767|gb|EEC78194.1| hypothetical protein OsI_17801 [Oryza sativa Indica Group] Length = 106 Score = 49.3 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 8/76 (10%), Positives = 17/76 (22%), Gaps = 1/76 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 E+ K + + + G + F+ + Sbjct: 27 DAADLARALREKIVAGERKFEDVATEESDCNSAKRGGDLGPFERGKMQKAFEKAVLALKV 86 Query: 255 NNTTNPYVTQKGVEYI 270 ++ T GV I Sbjct: 87 GEISDVVDTDSGVHII 102 >gi|217976694|ref|YP_002360841.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylocella silvestris BL2] gi|217502070|gb|ACK49479.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylocella silvestris BL2] Length = 636 Score = 49.3 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 23/202 (11%), Positives = 60/202 (29%), Gaps = 18/202 (8%) Query: 1 MTSKVFTSLSDFIKL----LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT---- 52 M + + +I + F+++ F + I +++ + E IT Sbjct: 1 MLDAMRAATKGWIGRTVMGIVLGFIILSFAVWGIGDIFRGFGANK-LAEVGNEQITTEAF 59 Query: 53 ----DGDISKRIALLKLQKINGE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 ++ + + N E L++ + L+ E + QE G+ + Sbjct: 60 RFAYQTELQRAQRQARRAITNDEAKRFGLDRQVLSRLVSEAVLDQETHALGLAMSDAEIA 119 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 G S + + ++ + ++ + + + L++ Sbjct: 120 RTIAADPSFKGASGQFDRARFEELLRDNGLTEKAFVREQRGVYLRQELIDSMTNGLQLPK 179 Query: 164 PANKQKMKNITVREYLIRTVLF 185 + + T L VL Sbjct: 180 AMLELIHRYQTETRTLDYFVLP 201 Score = 43.9 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 20/249 (8%), Positives = 60/249 (24%), Gaps = 20/249 (8%) Query: 72 LEKIAVQELIV--ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 L + + + + K ++ T++YF + A ++ Sbjct: 163 LRQELIDSMTNGLQLPKAMLELIHRYQTETRTLDYFVLPAAAAGTIALPSDDELGKYFED 222 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + + + + + ++K R + Sbjct: 223 RKLGYSAPEYRTLVTLTLTPESIAKPDAVSDADALRRYDEIKGEKYGAPEKRQIDQLFFS 282 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + +K L + + A + + + L + Sbjct: 283 DPAAAAAAREK-----------LDAGASFEDIVAQQGSTMKDVSLGLVTRGQLIDKAVAD 331 Query: 250 LKKSQNN--TTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIE---KHEA 302 + + + P TQ G I + +K + + T+ Sbjct: 332 VAFALPESAVSAPVKTQFGSVLIRVAAIEPSSAKPFEDVKEEIKREIATTRARGEIARLH 391 Query: 303 EYVKKLRSN 311 + ++ R++ Sbjct: 392 DAIEDQRAS 400 >gi|50285435|ref|XP_445146.1| hypothetical protein [Candida glabrata CBS 138] gi|49524449|emb|CAG58046.1| unnamed protein product [Candida glabrata] Length = 173 Score = 48.9 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 11/124 (8%), Positives = 34/124 (27%), Gaps = 2/124 (1%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 F+ + + + +K+ R + + + + + E+ Sbjct: 47 EQFISYLKDHPLRVRCLHILIKHKDSRRPASHRQEKITITKEEAIKELKEIQARLEEDQE 106 Query: 210 LRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267 + ++ + G Y ++ P F+ + ++ + GV Sbjct: 107 QKKKHSFEAIAKERSDCSSFKRGGDLGYFGRGEMQPSFEKAAFALKIDEVSDIVESDSGV 166 Query: 268 EYIA 271 I Sbjct: 167 HLIK 170 >gi|167033795|ref|YP_001669026.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida GB-1] gi|166860283|gb|ABY98690.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida GB-1] Length = 91 Score = 48.9 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 6/76 (7%), Positives = 18/76 (23%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++ +KF+ G + + ++ K Sbjct: 11 KTADEAEKLKQRIANGEAFDVLAKKFSLCPSGKRGGDLGEVRPGQMVGAIDQVIFKKPLR 70 Query: 257 TT-NPYVTQKGVEYIA 271 P ++ G + Sbjct: 71 VVHGPIKSKFGYHLVQ 86 >gi|75910422|ref|YP_324718.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anabaena variabilis ATCC 29413] gi|75704147|gb|ABA23823.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anabaena variabilis ATCC 29413] Length = 252 Score = 48.9 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 28/264 (10%), Positives = 70/264 (26%), Gaps = 28/264 (10%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 I+ I+ I + + L+ G+ +++ ++E + + + + Sbjct: 9 IDDRPIS---IEQTVKYLQSSGKLGQFISDVLRQYVIEQEIQ---GRDDVEINPALTEQT 62 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + L+ D F K L+ + Sbjct: 63 VIDFRLKNQLADPQAFQDWLTNNGTDYARFHASIT-----------FNFKLEKLKTLVTE 111 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 K I + +L R V+ I + + +Q +I + ++++ Sbjct: 112 AKLPEYFIEQKIFLDRVVISRIVVDSRELAEELQLQIAE-------GGSFEQLAKEYSVL 164 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 + G + + + + + + P + + Sbjct: 165 DDRLVNGMMGPISRGTMPDKLRAAIDVATPGQLVGPIEIDGRYGLFRVEQFLPASLDDI- 223 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKL 308 L EK AE ++KL Sbjct: 224 --QLKQALQNELFEKWLAEKIQKL 245 >gi|170585658|ref|XP_001897599.1| parvulin-type peptidyl-prolyl cis-trans isomerase, Bm parvulin [Brugia malayi] gi|158594906|gb|EDP33483.1| parvulin-type peptidyl-prolyl cis-trans isomerase, Bm parvulin [Brugia malayi] Length = 95 Score = 48.9 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 7/52 (13%) Query: 232 GKAQYLLESDLHPQFQNLLKKSQNNTT-------NPYVTQKGVEYIAICDKR 276 G ++ + FQ+ N+T P TQ G I + K+ Sbjct: 44 GDLGWMTRGSMVGTFQDAAFALPNSTVDRPVYTDPPVRTQFGYHIIMVEAKK 95 >gi|126642856|ref|YP_001085840.1| peptidyl-prolyl cis-trans isomerase precursor [Acinetobacter baumannii ATCC 17978] Length = 101 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 6/68 (8%), Positives = 22/68 (32%), Gaps = 1/68 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT-TNPYVTQ 264 ++ +++++ G+ + + L P ++ + P +Q Sbjct: 26 KKKLQSGADFAKLAKQYSTCNSAKRGGELGEVKKGQLVPVIDKVVFTAAERVLQGPIKSQ 85 Query: 265 KGVEYIAI 272 G + + Sbjct: 86 FGYHLLEV 93 >gi|189461626|ref|ZP_03010411.1| hypothetical protein BACCOP_02285 [Bacteroides coprocola DSM 17136] gi|189431656|gb|EDV00641.1| hypothetical protein BACCOP_02285 [Bacteroides coprocola DSM 17136] Length = 453 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 32/300 (10%), Positives = 78/300 (26%), Gaps = 43/300 (14%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 ++ L+ I + A S I I G+ + + K E Sbjct: 1 MIKLIRQLLWLSWPFIPCFSFAAERSDILLRIGGQTVAKQEFEFYCKHSLAGKCQTESVN 60 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A + + LK ++ +SG + Sbjct: 61 EAFDDFLFRKLKAADMRQSGCDT------------------------------LPAFRQY 90 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + + + + ++ + + + + I + + + + Sbjct: 91 CKVMRGELLKNVLLDKEQEERI----CRDLYRQTVERLSKSGWVKIEQITILLSQHAPKA 146 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 + D+ ++L+ D + + + L L S+ Sbjct: 147 DERAARNRMDSIYAKLKSGADFTSFSCQPEGGTWIPVVEL-------LQEFADRLASLSK 199 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRSNA 312 N + P+ + GV I + D + + YL A + + + + R A Sbjct: 200 NEFSEPFFSPLGVHIIRLTDTKPCISYEEARPYLLAYMERLGADHPALKHDLFTQWREGA 259 >gi|171189871|gb|ACB42272.1| putative peptidylprolyl isomerase [Francisella tularensis subsp. holarctica] Length = 47 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 16/46 (34%), Gaps = 1/46 (2%) Query: 231 IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 G + + P+F + + + P TQ G + I + Sbjct: 1 GGDLGTFSQGQMVPEFDRVVFNVELHKVHGPVQTQFGYHLLEITSR 46 >gi|322705885|gb|EFY97468.1| peptidyl-prolyl cis/trans isomerase [Metarhizium anisopliae ARSEF 23] Length = 228 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 8/92 (8%), Positives = 22/92 (23%), Gaps = 1/92 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + ++ + + + + G Y Sbjct: 134 RPSSWRESEITRSKDDAMEIIKAHEAKIKSGAISLGDLAPTESDCSSARKRGDLGYFGRG 193 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 D+ +F++ + T G+ I Sbjct: 194 DMQKEFEDAAFALKPGEMSGVVETASGLHLIE 225 >gi|218533006|ref|YP_002423822.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium chloromethanicum CM4] gi|218525309|gb|ACK85894.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium chloromethanicum CM4] Length = 634 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 50/166 (30%), Gaps = 18/166 (10%) Query: 1 MTSKVFTSLSDFI-KLLTTYFVLIIFCIVPIVSYKSW--AMSSRIRTTINGEVITDGDIS 57 M + ++ ++ K++ + + V I + + SS T+ I+ ++ Sbjct: 1 MLQSIRSASQHWLGKVVLSVIFTFLIAGVAIFGVEEFFRGGSSTAVATVGKTPISAEEVR 60 Query: 58 KRIALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + LE+ + +LI E Q+ G+ TV Sbjct: 61 TAYQNQLQRYQAQLKRTLTPDQARAMGLERQVLAQLITEAALDQKTTDLGLAVSDATVLR 120 Query: 105 FFV--QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 +N S + F Q G N +S+ + Sbjct: 121 AIQDEPSFKNANGSFDRALFFQTLQRAGLNEAMFVREQRSVIARLQ 166 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 7/89 (7%), Positives = 26/89 (29%), Gaps = 8/89 (8%) Query: 233 KAQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYL 288 + +++L Q + P + G + + + +K + Sbjct: 315 DLGTMTKAELFDPAVGNAAFALEQGKVSEPVKGRFGTVLLRVTAIEPGTVKPFDEVKDEI 374 Query: 289 SAQNTPTKIE----KHEAEYVKKLRSNAI 313 + ++ + ++ R++A Sbjct: 375 RKEIALKRVRDGGFDKVQDAIEDARASAK 403 >gi|163854063|ref|YP_001642106.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium extorquens PA1] gi|163665668|gb|ABY33035.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium extorquens PA1] Length = 634 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 50/166 (30%), Gaps = 18/166 (10%) Query: 1 MTSKVFTSLSDFI-KLLTTYFVLIIFCIVPIVSYKSW--AMSSRIRTTINGEVITDGDIS 57 M + ++ ++ K++ + + V I + + SS T+ I+ ++ Sbjct: 1 MLQSIRSASQHWLGKVVLSVIFTFLIAGVAIFGVEEFFRGGSSTAVATVGKTPISAEEVR 60 Query: 58 KRIALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + LE+ + +LI E Q+ G+ TV Sbjct: 61 TAYQNQLQRYQAQLKRTLTPDQARAMGLERQVLAQLITEAALDQKTTDLGLAVSDATVLR 120 Query: 105 FFV--QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 +N S + F Q G N +S+ + Sbjct: 121 AIQDEPSFKNANGSFDRALFFQTLQRAGLNEAMFVREQRSVIARLQ 166 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 7/89 (7%), Positives = 26/89 (29%), Gaps = 8/89 (8%) Query: 233 KAQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYL 288 + +++L Q + P + G + + + +K + Sbjct: 315 DLGTMTKAELFDPAVGNAAFALEQGKVSEPVKGRFGTVLLRVTAIEPGTVKPFDEVKDEI 374 Query: 289 SAQNTPTKIE----KHEAEYVKKLRSNAI 313 + ++ + ++ R++A Sbjct: 375 RKEIALKRVRDGGFDKVQDAIEDARASAK 403 >gi|213581234|ref|ZP_03363060.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 203 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 71/196 (36%), Gaps = 8/196 (4%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ + Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ A +++ + I + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDASTELNLSHILIALPEN 186 Query: 193 QNQGFVQKRIKDAEES 208 V + AE Sbjct: 187 PTSEQVNDAQRQAESI 202 >gi|330721567|gb|EGG99598.1| Peptidyl-prolyl cis-trans isomerase ppiC [gamma proteobacterium IMCC2047] Length = 92 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 8/76 (10%), Positives = 19/76 (25%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN- 255 ++ + ++ +K + G + N++ K Sbjct: 12 KTKEEAEAIKKKLAGGADFATLAKKHSLCNSAKRGGDLGEFGPGKMIKAVDNVVFKKPVL 71 Query: 256 NTTNPYVTQKGVEYIA 271 P T+ G I Sbjct: 72 KVHGPIKTKFGYHLIE 87 >gi|119496701|ref|XP_001265124.1| peptidyl-prolyl cis-trans isomerase [Neosartorya fischeri NRRL 181] gi|119413286|gb|EAW23227.1| peptidyl-prolyl cis-trans isomerase [Neosartorya fischeri NRRL 181] Length = 129 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 28/85 (32%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K + +++ G + + L+ F+ + + + Sbjct: 46 EKFSKKEEAVEKLRNGAKFDDVAREYSED-KARQGGSLGWKVRGSLNADFEKAAYELEPS 104 Query: 257 TTNP-----YVTQKGVEYIAICDKR 276 TT T G I + ++ Sbjct: 105 TTANPKYVEVKTGFGYHIIMVEGRK 129 >gi|70990890|ref|XP_750294.1| peptidyl-prolyl cis-trans isomerase [Aspergillus fumigatus Af293] gi|74669729|sp|Q4WJM6|PIN4_ASPFU RecName: Full=Peptidyl-prolyl cis-trans isomerase pin4; Short=PPIase pin4; AltName: Full=Parvulin-14; Short=Par14 gi|66847926|gb|EAL88256.1| peptidyl-prolyl cis-trans isomerase [Aspergillus fumigatus Af293] gi|159130767|gb|EDP55880.1| peptidyl-prolyl cis-trans isomerase [Aspergillus fumigatus A1163] Length = 129 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 28/85 (32%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K + +++ G + + L+ F+ + + + Sbjct: 46 EKFSKKEEALEKLRNGAKFDDVAREYSED-KARQGGSLGWKVRGSLNADFEKAAYELEPS 104 Query: 257 TTNP-----YVTQKGVEYIAICDKR 276 TT T G I + ++ Sbjct: 105 TTANPKYVEVKTGFGYHIIMVEGRK 129 >gi|46124309|ref|XP_386708.1| hypothetical protein FG06532.1 [Gibberella zeae PH-1] Length = 177 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 9/92 (9%), Positives = 24/92 (26%), Gaps = 1/92 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + + + ++ + + G Y Sbjct: 83 RPSSWREAEITRTKEEAFEIIKEHEQKIKSGSVSLGELALTESDCSSARKRGDLGYFGRG 142 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 D+ +F++ S + T G+ I Sbjct: 143 DMQKEFEDASFGLSPGQMSEIVETASGLHLIE 174 >gi|164425892|ref|XP_963036.2| peptidyl-prolyl cis-trans isomerase ssp-1 [Neurospora crassa OR74A] gi|189046952|sp|O60045|SSP1_NEUCR RecName: Full=Peptidyl-prolyl cis-trans isomerase ssp-1; Short=PPIase ssp-1 gi|157071110|gb|EAA33800.2| peptidyl-prolyl cis-trans isomerase ssp-1 [Neurospora crassa OR74A] Length = 182 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 11/170 (6%), Positives = 33/170 (19%), Gaps = 1/170 (0%) Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + + F+S ++ + + + Sbjct: 10 PEDWEVRHSQSKNLPYYFNSATKTSRWEPPSGTDVDKLKIYMAKYHSPTSQQQQQQQQQQ 69 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + R + + Q + + + Sbjct: 70 PQGKIRCAHLLVKHNQSRRPSSWRESEITRTKQEALTTLQGFEQRIKSGSISLGELALTE 129 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + G Y D+ +F++ + T G+ I Sbjct: 130 SDCSSARKRGDLGYFGRGDMQKEFEDAAFALKPGEISGIVDTASGLHLIE 179 >gi|327307516|ref|XP_003238449.1| peptidyl-prolyl cis-trans isomerase [Trichophyton rubrum CBS 118892] gi|326458705|gb|EGD84158.1| peptidyl-prolyl cis-trans isomerase [Trichophyton rubrum CBS 118892] Length = 132 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 26/85 (30%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K +F+ G + + L F+ + + + Sbjct: 49 EKHSKKEEALEKLRAGVKFDEVAREFSED-KARQGGSLGWKVRGSLDAAFEKAAYELEPS 107 Query: 257 TTNP-----YVTQKGVEYIAICDKR 276 TT T G I + ++ Sbjct: 108 TTGSPKYVEVKTGFGYHIIMVEGRK 132 >gi|317157350|ref|XP_001826421.2| peptidyl-prolyl cis-trans isomerase ssp-1 [Aspergillus oryzae RIB40] Length = 177 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 7/109 (6%), Positives = 24/109 (22%), Gaps = 1/109 (0%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + + R + + + ++ + + Sbjct: 66 EGKIRCSHLLVKHKDSRRPSSWKESEITRSKEEAIEILRGHETRINSGEVSLGDLAMSES 125 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ +F++ + T GV I Sbjct: 126 DCSSARKKGDLGFFGRGEMQKEFEDAAFALQPGQVSGIVDTASGVHLIE 174 >gi|294507825|ref|YP_003571883.1| conserved hypothetical protein, secreted [Salinibacter ruber M8] gi|294344153|emb|CBH24931.1| conserved hypothetical protein, secreted [Salinibacter ruber M8] Length = 289 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 29/290 (10%), Positives = 73/290 (25%), Gaps = 33/290 (11%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 + ++ A + +T D+ + +A + + + E K A+ + + TL Sbjct: 21 AGLAGCQTEAPPDSYVARVGTHYLTGADLDRMLAGMGPVRDSTEARKQAIDQWVTRTLLY 80 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 +E E+ ++ + Q + + Y + Sbjct: 81 REAERLNLSSNDEVQQRLRRQRRAVLVSALRTRLEEEADVRPTPEKVRTYFERHKEQLRL 140 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + ++ R L + P + Sbjct: 141 REPYVRVQ------------YLAAPDRPTAQTARQALRTPPAPPDTTWARLVAEY----- 183 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 D + + + + S L + L + TT Sbjct: 184 -----ATDTTRARRLSRRFVPQS------RLGQQVPALADRLADLQEGETTPVVQASGRY 232 Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE----YVKKLRSNAI 313 + + D+R G ++ + + + V++LR+ A Sbjct: 233 HVLRL-DRRLPEGTPPELDWVEPKIRRRLRIRARKQIHATEVQRLRNRAQ 281 >gi|83775165|dbj|BAE65288.1| unnamed protein product [Aspergillus oryzae] Length = 262 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 7/109 (6%), Positives = 24/109 (22%), Gaps = 1/109 (0%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + + R + + + ++ + + Sbjct: 151 EGKIRCSHLLVKHKDSRRPSSWKESEITRSKEEAIEILRGHETRINSGEVSLGDLAMSES 210 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ +F++ + T GV I Sbjct: 211 DCSSARKKGDLGFFGRGEMQKEFEDAAFALQPGQVSGIVDTASGVHLIE 259 >gi|310791533|gb|EFQ27060.1| ppic-type ppiase domain-containing protein [Glomerella graminicola M1.001] Length = 146 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 6/81 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A K +F+ G + + L P+F+++ + Sbjct: 50 EKHAKKEEALAKLRDGTKFDEVAREFSED-KARQGGSLGWKTKGSLDPKFEDVAFALSTS 108 Query: 257 TTN-PY----VTQKGVEYIAI 272 TT P T+ G I + Sbjct: 109 TTASPVYGEAKTEFGYHIIMV 129 >gi|126658177|ref|ZP_01729328.1| hypothetical protein CY0110_11602 [Cyanothece sp. CCY0110] gi|126620548|gb|EAZ91266.1| hypothetical protein CY0110_11602 [Cyanothece sp. CCY0110] Length = 257 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 27/252 (10%), Positives = 73/252 (28%), Gaps = 21/252 (8%) Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 T D+ + I LK E+ + +Q+ I+E ++ + Sbjct: 6 TLIDVEEVIDYLKKNLKFKEICQQILQQRIIEQA---SQQRDLTITEEEIQAEADNIRRE 62 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 A D ++L+ + I + ++ + + + +N F + + N ++ Sbjct: 63 KRLEKAVDTLAWLNGELITPDDWEAGIQDTLLRKKLAQNLFDKEVEKTFQQSWFNFDQVL 122 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 + + L + + F Q + + RL Sbjct: 123 LYQIIVPYEKLALEIFYQIEEEEMSFYQAAHLYDIDEKRRL-----------------QC 165 Query: 232 GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290 G + ++ P+ ++ + P+ T++G I + + + Sbjct: 166 GYEGKVYRFNMKPELSPVIFAANPGEVIPPFKTEQGYHIIMVERFIKAQLTEEIYEQIIN 225 Query: 291 QNTPTKIEKHEA 302 + + Sbjct: 226 KMFDQWLSSELN 237 >gi|161528450|ref|YP_001582276.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosopumilus maritimus SCM1] gi|160339751|gb|ABX12838.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosopumilus maritimus SCM1] Length = 92 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 9/67 (13%), Positives = 19/67 (28%), Gaps = 2/67 (2%) Query: 207 ESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 E K ++ + G Y + + F++ K + P ++ Sbjct: 23 EKLKSGEKFGKLAKELSIDSGSAKKNGNLGYFTKGMMVKPFEDAAFKLQVGEVSEPIKSE 82 Query: 265 KGVEYIA 271 G I Sbjct: 83 FGYHIIK 89 >gi|17229105|ref|NP_485653.1| hypothetical protein alr1613 [Nostoc sp. PCC 7120] gi|17135433|dbj|BAB77979.1| alr1613 [Nostoc sp. PCC 7120] Length = 252 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 28/264 (10%), Positives = 70/264 (26%), Gaps = 28/264 (10%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 I+ I+ I + + L+ G+ +++ ++E + + + + Sbjct: 9 IDDRPIS---IEQTVKYLQSSGKLGQFISDVLRQYVIEQEIQ---GRDDVEINPALTEQT 62 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + L+ D F K L+ + Sbjct: 63 VIDFRLKNQLADPQAFQDWLTNNGTDYARFHASIT-----------FNFKLEKLKTLVTE 111 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 K I + +L R V+ I + + +Q +I + ++++ Sbjct: 112 AKLPEYFIEQKIFLDRVVISRIVVDSRELAEELQLQIAE-------GGSFEQLAKEYSIL 164 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 + G + + + + + + P + + Sbjct: 165 DDRLVNGMMGPISRGTMPDKLRAAIDVATPGQLVGPIEIDGRYGLFRVEQFLPASLDDI- 223 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKL 308 L EK AE ++KL Sbjct: 224 --QLKQALQNELFEKWLAEKIQKL 245 >gi|161507900|ref|YP_001577864.1| peptidylprolyl isomerase [Lactobacillus helveticus DPC 4571] gi|160348889|gb|ABX27563.1| PrtM precursor protein [Lactobacillus helveticus DPC 4571] Length = 300 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 28/285 (9%), Positives = 73/285 (25%), Gaps = 33/285 (11%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91 + S + ++ + G IT + + K A+ +I+ +Q+ Sbjct: 22 AACSNSGNNATVASYKGGKITQQQYYDEMK-------KSQAGKSALANMIINRALEQQYG 74 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 K + + + + + + + Q++ +++ Sbjct: 75 KYVSSKKVDKKYSNYKKQYGSQFSAVLQQNGMTASTF-----------KQNLKTNLLSEA 123 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + + K V + Q + + +S + Sbjct: 124 ALKHINKISKKQEQQAWKNYQPKVT-----VQHILVAKKSTAESIIKQLKDGKSFKSLAK 178 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEY 269 + A K+ + L F+ K T P +Q G Sbjct: 179 KYSLDTATKNKAGKLPAFDSTD------NTLDSAFKTAAFKLKTGEVTESPVKSQSGYHV 232 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNA 312 I + G K + + + + + + + NA Sbjct: 233 IKMISHPAKGKFADHKKAIDDEIYASMAQDQAVMKDVIATVLKNA 277 >gi|112148583|gb|ABI13576.1| protease maturation protein precursor [Lactobacillus helveticus CNRZ32] gi|328464668|gb|EGF36014.1| peptidylprolyl isomerase [Lactobacillus helveticus MTCC 5463] Length = 300 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 28/285 (9%), Positives = 73/285 (25%), Gaps = 33/285 (11%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91 + S + ++ + G IT + + K A+ +I+ +Q+ Sbjct: 22 AACSNSGNNATVASYKGGKITQQQYYDEMK-------KSQAGKSALANMIINRALEQQYG 74 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 K + + + + + + + Q++ +++ Sbjct: 75 KYVSSKKVDKKYSNYKKQYGSQFSAVLQQNGMTASTF-----------KQNLKTNLLSEA 123 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + + K V + Q + + +S + Sbjct: 124 ALKHINKISKKQEQQAWKNYQPKVT-----VQHILVAKKSTAESIIKQLKDGKSFKSLAK 178 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEY 269 + A K+ + L F+ K T P +Q G Sbjct: 179 KYSLDTATKNKAGKLPAFDSTD------NTLDSAFKTAAFKLKTGEVTESPVKSQSGYHV 232 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNA 312 I + G K + + + + + + + NA Sbjct: 233 IKMISHPAKGKFADHKKAIDDEIYASMAQDQAVMKDVIATVLKNA 277 >gi|119597662|gb|EAW77256.1| hCG1789710 [Homo sapiens] Length = 131 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 26/83 (31%), Gaps = 8/83 (9%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT--- 257 +I +A E + +++ G ++ + FQ + Sbjct: 50 KIMEAMEKLKSGMRFNEVATQYSED-KARQGGVLGWMTRGSMVGPFQEAAFALPISVMDK 108 Query: 258 ---TNP-YVTQKGVEYIAICDKR 276 T+P T+ G I + ++ Sbjct: 109 PVFTDPAVKTKFGYHIIMVEGRK 131 >gi|194290267|ref|YP_002006174.1| peptidylprolyl isomerase [Cupriavidus taiwanensis LMG 19424] gi|193224102|emb|CAQ70111.1| putative Peptidylprolyl isomerase [Cupriavidus taiwanensis LMG 19424] Length = 250 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 27/270 (10%), Positives = 68/270 (25%), Gaps = 26/270 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 I+ EV+ + + + LLKL L V++++ + L ++ G+ Sbjct: 4 IVRIDDEVLG---VEEFVRLLKLTGQFEGL----VEQIVRDKLTVHAAKRQGMVVTPE-- 54 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + A + + + I + + M + E Sbjct: 55 --EIQERADQFRRVQGLHRAADMNHYLDALNVSLDEFEAFITDSLYQERMMAQV-CSEAA 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + V+ S K + + + Sbjct: 112 VQEYFALNSPRFDSIEVSHIVVDSEG-----------KARELISYLQDDPEAFAEMAREH 160 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKG--VEYIAICDKRDLG 279 + G+ +L L + + + + P+ E + K Sbjct: 161 SIADTRERGGEIGKVLRGSLKTEIEAKVFNAEPGDLLGPFPAADRSFFEVFLVRAKHPAT 220 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + + + E+V + R Sbjct: 221 LDSEVAVEVRRLLREDWLMARAQEHVIEAR 250 >gi|182678431|ref|YP_001832577.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Beijerinckia indica subsp. indica ATCC 9039] gi|182634314|gb|ACB95088.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Beijerinckia indica subsp. indica ATCC 9039] Length = 640 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/192 (8%), Positives = 49/192 (25%), Gaps = 21/192 (10%) Query: 1 MTSKVFTSLSDFIKL----LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI 56 M + + +I L +++ F I + ++ + IT Sbjct: 1 MLEAMRVATRGWIGRSLMTLVMGLIILSFIIWGVGDMFRNLGANT-LAKVGDTEITTQAY 59 Query: 57 SKRIALLKLQKINGE-------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + + + + L++ + LI E QE +K G+ + + Sbjct: 60 REAYSTILQRLQRQARRAITHEEARMLGLDRQILARLIGEATLNQEADKLGLALADSEIA 119 Query: 104 YFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + G L + + + ++ + + + Sbjct: 120 RIIAKDELFKGANGAFDRQRFEALLRDNGMTEKTFVREQHELLLRHMITDAVVTGLSVPK 179 Query: 161 MEIPANKQKMKN 172 + + Sbjct: 180 IMLEMIHAFQTE 191 >gi|28378171|ref|NP_785063.1| peptidylprolyl isomerase [Lactobacillus plantarum WCFS1] gi|254556379|ref|YP_003062796.1| peptidylprolyl isomerase [Lactobacillus plantarum JDM1] gi|300767131|ref|ZP_07077043.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180351|ref|YP_003924479.1| peptidylprolyl isomerase [Lactobacillus plantarum subsp. plantarum ST-III] gi|46396873|sp|Q88X05|PRSA1_LACPL RecName: Full=Foldase protein prsA 1; Flags: Precursor gi|28271006|emb|CAD63911.1| peptidylprolyl isomerase [Lactobacillus plantarum WCFS1] gi|254045306|gb|ACT62099.1| peptidylprolyl isomerase [Lactobacillus plantarum JDM1] gi|300494950|gb|EFK30106.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045842|gb|ADN98385.1| peptidylprolyl isomerase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 298 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 29/285 (10%), Positives = 66/285 (23%), Gaps = 40/285 (14%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K ++ + + +G IT+ + Sbjct: 1 MKKWLIALAGVLLTFTLAGCGS------KTVASTSGGKITESQYYSSMK-------GTSS 47 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 K +Q++I+ + +++ T + + S + Sbjct: 48 GKQVLQQMILNKVLEKDYGSKVSTKQVT----------KQYNTYKSQYGSSFSTVLSQNG 97 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + Q ++K K + + + + + L Sbjct: 98 LTTKTFKEQLRSNLLLKEAVKDKVKITDKALKKQWKSYEPK------------VTVQHIL 145 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKA---QYLLESDLHPQFQN 248 + ++ DA + +K+++ + GK S Sbjct: 146 VAKSATADKVLDALKKDSSQANFTKLAKKYSTDTTTKNDGGKLSAFDNTNTSYSSKFLTA 205 Query: 249 LLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292 K T T G E I + G A L Q Sbjct: 206 AFKLKNGEYTTSAVKTSNGYEIIRMIKNPGKGKMSDHTADLKKQI 250 >gi|85704061|ref|ZP_01035164.1| hypothetical protein ROS217_13721 [Roseovarius sp. 217] gi|85671381|gb|EAQ26239.1| hypothetical protein ROS217_13721 [Roseovarius sp. 217] Length = 288 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 19/249 (7%), Positives = 50/249 (20%), Gaps = 2/249 (0%) Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 +V+ I+ + E + E Sbjct: 24 DEEAPGTASVENQILIEAAEVERMAAAWEQRWQRPPSEAELSGLIGEAVREQVLYREALT 83 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 D + + D + + A + + + + Sbjct: 84 LGLDRDDVVVRRHLRQKYEFLTQDLAYDTDPDDATLRAYFEAQGDRYAQSARVSFHQVLF 143 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247 + Q + A+ P L S D++ + Sbjct: 144 SPTRRGAQAEIDAVQTLADLKWATEPGTAETLGDVTSLPSDLAGLDLHAIEAMFGPDFVA 203 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYV 305 L P V+ G+ + I ++ ++ + + Sbjct: 204 ALQTVEPGRWAGPIVSDYGLHLVWITERAPGRRLAFEEVRQRVRDDWIYEQRVAANEAVY 263 Query: 306 KKLRSNAII 314 ++L + Sbjct: 264 RRLLERYEV 272 >gi|26989789|ref|NP_745214.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida KT2440] gi|24984686|gb|AAN68678.1|AE016497_3 peptidyl-prolyl cis-trans isomerase C [Pseudomonas putida KT2440] Length = 91 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 6/76 (7%), Positives = 18/76 (23%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++ +KF+ G + + ++ K Sbjct: 11 KTADEAEKLKQRIANGEAFDVLAKKFSLCPSGKRGGDLGEIRPGQMVGAIDQVIFKKPLR 70 Query: 257 TT-NPYVTQKGVEYIA 271 P ++ G + Sbjct: 71 VVHGPIKSKFGYHLVQ 86 >gi|213611260|ref|ZP_03370086.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 200 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 71/194 (36%), Gaps = 8/194 (4%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ + Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 ++ + + I +V N+ + L E+ A +++ + I + Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDASTELNLSHILIALPEN 186 Query: 193 QNQGFVQKRIKDAE 206 V + AE Sbjct: 187 PTSEQVNDAQRQAE 200 >gi|1688322|gb|AAB36960.1| PinA [Dictyostelium discoideum] Length = 243 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 8/88 (9%), Positives = 18/88 (20%), Gaps = 1/88 (1%) Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + + K + + K + G + Sbjct: 153 WRESKITRTKERAIAKLNEYRATIISGSATFEDLAHKNSDCSSAKRGGYLDPFKRGQMQR 212 Query: 245 QFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 F++ + T GV I Sbjct: 213 PFEDCAFSLKVGEVSGIVDTDSGVHIIE 240 >gi|66827051|ref|XP_646880.1| hypothetical protein DDB_G0268618 [Dictyostelium discoideum AX4] gi|60474962|gb|EAL72898.1| hypothetical protein DDB_G0268618 [Dictyostelium discoideum AX4] Length = 268 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 8/88 (9%), Positives = 18/88 (20%), Gaps = 1/88 (1%) Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + + K + + K + G + Sbjct: 178 WRESKITRTKERAIAKLNEYRATIISGSATFEDLAHKNSDCSSAKRGGYLDPFKRGQMQR 237 Query: 245 QFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 F++ + T GV I Sbjct: 238 PFEDCAFSLKVGEVSGIVDTDSGVHIIE 265 >gi|326385672|ref|ZP_08207302.1| hypothetical protein Y88_2730 [Novosphingobium nitrogenifigens DSM 19370] gi|326209830|gb|EGD60617.1| hypothetical protein Y88_2730 [Novosphingobium nitrogenifigens DSM 19370] Length = 286 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/182 (9%), Positives = 38/182 (20%), Gaps = 23/182 (12%) Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 Q + + + E E+ A E I + Sbjct: 100 RQRLIERMRMDMAPEPAEPSEDELMAFYATHAQSYSLEPSISFDHVYFLHAPADPAAVLA 159 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-----Q 254 + + S + F Q Sbjct: 160 RL----------------NAGEKVEGDDFWMGRDLPRYGRSMISAMFGLPFLDKLETLPQ 203 Query: 255 NNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 P + KG ++ + D+R ++ + ++ + +LRS Sbjct: 204 GRWVGPVASIKGTHFVRVNDRRPAIPRPYPEVRDLVLHDWKTAHADQALQSQLTRLRSRY 263 Query: 313 II 314 + Sbjct: 264 RV 265 >gi|224025971|ref|ZP_03644337.1| hypothetical protein BACCOPRO_02722 [Bacteroides coprophilus DSM 18228] gi|224019207|gb|EEF77205.1| hypothetical protein BACCOPRO_02722 [Bacteroides coprophilus DSM 18228] Length = 459 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/257 (10%), Positives = 71/257 (27%), Gaps = 35/257 (13%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 S A + ++ I+G+ +TD ++ + ++ L + Sbjct: 19 PSLAETGKVLMRIDGKEVTDTELEAYYSRSPVRSRETPQR------YFNHFLFFKLKVAD 72 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 ++ +T+ F Q+ +G + + H Q + + V+ +F+ Sbjct: 73 ALSMGWDTLPEFKQQYHVLSGEMLKPVLVKRQEMKAFFQHQYQEEKSRLLTNTWVRTEFL 132 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 L + Q + A + Sbjct: 133 T-----------------------------LPLSQHPAKAEEDQAQSLMDSAYVALQNGM 163 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273 ++ S+ + G L + + L + + P+ + G+ + + Sbjct: 164 TFSELTSRYVSQKPQLKSGTMWMPLVGLVPELAERLQNLDEGVVSRPFYSPVGMHIVRLL 223 Query: 274 DKRDLGGEIALKAYLSA 290 D++D L A Sbjct: 224 DRKDGRDFRDTYPMLQA 240 >gi|227499518|ref|ZP_03929625.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] gi|227218397|gb|EEI83648.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] Length = 308 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/300 (9%), Positives = 81/300 (27%), Gaps = 8/300 (2%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAV 77 + ++ S +++ + + ++N + I+ SK + + + + + Sbjct: 16 LVLAIFSIILLTSCSKTNFSNEN-VIASVNNKTISKDLYSKELKFYQ-SYYSKVYGENFL 73 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 E E+ + + +N ++ S+ L K + + Sbjct: 74 NEKNDRGKTNDEVLREDLVDSMIKDQVMLNDLEKNKIKLDDNKSNELKKLISDKLNGEDS 133 Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 L V +N F N + + +K +++ + + + Sbjct: 134 LKANIKALGVNENTFNDIIYNDSIRKAHYELFLKINKIKDSDVLEFYKKNKYIQKLYKYN 193 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257 + E ++ K + D K+++ Sbjct: 194 ALVFEDEQEAKLIKDSIKDANDFKSYINKSVRNFSVINSDFVYDKDELLSLSKLKNKDKV 253 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 ++ + + I + L + +E Y+ KL + I + Sbjct: 254 SDIIKYKNKYYILMIN------SFNENENELLLRAKDIYLENSYETYLDKLVKESNIKLF 307 >gi|88707182|ref|ZP_01104874.1| PpiC-type peptidyl-prolyl cis-trans isomerase domain protein [Congregibacter litoralis KT71] gi|88698587|gb|EAQ95714.1| PpiC-type peptidyl-prolyl cis-trans isomerase domain protein [Congregibacter litoralis KT71] Length = 295 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 24/308 (7%), Positives = 64/308 (20%), Gaps = 37/308 (12%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K + ++ V ++ G VIT + + + Sbjct: 1 MMKRVLIAISALLSVAVFAADDAGVLIADS------GVVITTEEFEAIYDTMPPSL-KAK 53 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + + L + + D + D Sbjct: 54 MRDDVAERLEIINSLLVA----------------------RKLAAEADKITPSDDDYWTL 91 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + ++ +V + L E ++ +L P Sbjct: 92 HAALVGAKYEYMFKRLVSEVSEPDFEPLARERYVTQKDKYAFVPEVRASSHILLISPPGI 151 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + K ++ R + E G + + Sbjct: 152 DRT-EVRAKAQGLLDQLRAGADFEAMVAEYSDDAGTRARKGSLGKYIRFGDPGITPPYSE 210 Query: 252 -----KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 ++ + +Q GV I + ++ + + Sbjct: 211 ALFEIENVGEYSEVTDSQFGVHIIRLDAVQESAYAE--FDKVRDVIITEIKREFAGLARD 268 Query: 307 KLRSNAII 314 ++R I Sbjct: 269 EVRGRFSI 276 >gi|299768860|ref|YP_003730886.1| peptidyl-prolyl cis-trans isomerase precursor [Acinetobacter sp. DR1] gi|298698948|gb|ADI89513.1| peptidyl-prolyl cis-trans isomerase precursor [Acinetobacter sp. DR1] Length = 96 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 6/68 (8%), Positives = 22/68 (32%), Gaps = 1/68 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT-TNPYVTQ 264 ++ +++++ G+ + + L P ++ + P +Q Sbjct: 21 KKKLQNGADFAKIAKQYSTCNSAKRGGELGEVKKGQLVPVIDKVVFTAAERVLQGPIKSQ 80 Query: 265 KGVEYIAI 272 G + + Sbjct: 81 FGYHLLEV 88 >gi|62184931|ref|YP_219716.1| hypothetical protein CAB299 [Chlamydophila abortus S26/3] gi|62147998|emb|CAH63749.1| putative exported protein [Chlamydophila abortus S26/3] Length = 361 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 86/304 (28%), Gaps = 38/304 (12%) Query: 34 KSWAMSSRIRTTINGE-VITDGDISKRIALLKLQKINGELEKI-------------AVQE 79 A+ R+ I+ + V+T D+ +++ LL LE ++ Sbjct: 47 AGIAIHDRVLFKIDDDTVVTTLDVIQKLNLLFASSYPQLLESYPARSQYYTAMWPVVLES 106 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 +I E L + + I D TVN D S F + + + Sbjct: 107 VIDEFLMVADAKAKKIQVDPTTVNQEIEAMFGR------DLSFFYVHFDMTPEDIFKVVH 160 Query: 140 IQSIWPDVVKNDFMLKY--GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 I V+ K +I + ++ + L + + +I Sbjct: 161 RTLIAQRVMGMMVRSKVMLKVTPGKIREHYNQLAEEAAKTTLWKYRVVTIKAATESLSSQ 220 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKI----------HDVSIGKAQYLLESDLHPQFQ 247 + RI K+ + +D + A + S ++ Sbjct: 221 IADRICARLNETQSWNKERLSALALSQGGQFVCSEEFIRNDKELSDAHKMELSSVNYPLA 280 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + + + + + ++ + E E++Y KK Sbjct: 281 ICSQPKAH------KSGHKLYVLLEKSTLPMQPLEEIETQIKQTLFMHYAETIESQYKKK 334 Query: 308 LRSN 311 LR+ Sbjct: 335 LRAR 338 >gi|148555266|ref|YP_001262848.1| hypothetical protein Swit_2351 [Sphingomonas wittichii RW1] gi|148500456|gb|ABQ68710.1| hypothetical protein Swit_2351 [Sphingomonas wittichii RW1] Length = 676 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 52/170 (30%), Gaps = 14/170 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR--IRTTINGEVITDGDISK 58 M S +LS +I L VL+ F I + S S +S I+G ++ D+ + Sbjct: 32 MISFFRRALSSWIILGILALVLVAFIITGVESPGSIGGTSNGATVAKIDGGKVSTNDLLR 91 Query: 59 RI--ALLKLQKINGELE----------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 R+ L++ EL+ + LI ++ G ++ Sbjct: 92 RVQNQFDALRRERPELDHKSFLAAGGFEGVTNGLIDARAIDAWGKEQGFAIGKRLIDAQI 151 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 G++ + + + ++ L + Sbjct: 152 AGMDAFRGITGAFDETVMRNRLAQARISERELRADIAGELMRNQILTPAV 201 >gi|307109392|gb|EFN57630.1| hypothetical protein CHLNCDRAFT_50865 [Chlorella variabilis] Length = 118 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 7/98 (7%), Positives = 22/98 (22%), Gaps = 1/98 (1%) Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 + ++ + V++ + + + S G Sbjct: 17 KNSRRPSSWKEPVVTRSEEEALAMVKRFREQIAAAPDLAAAFAALATTESHCGSARSGGD 76 Query: 234 AQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + + F++ + P + G I Sbjct: 77 LGWFGRGQMQKAFEDAAFALQVGELSQPMFSDSGCHII 114 >gi|303389522|ref|XP_003072993.1| peptidyl-prolyl cis-trans isomerase [Encephalitozoon intestinalis ATCC 50506] gi|303302137|gb|ADM11633.1| peptidyl-prolyl cis-trans isomerase [Encephalitozoon intestinalis ATCC 50506] Length = 138 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 11/121 (9%), Positives = 34/121 (28%), Gaps = 1/121 (0%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + P+ ++ +I ++ R + + + + +K Sbjct: 16 YNTETAEKTQRKPSEGFRLYHILIKHEKSRKPVDVSVEEAFLKIKEIYEELKAKVNDSDF 75 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 K + G ++ +++ +F+ + + P T G I Sbjct: 76 KEIFKEYAYKHSQCSSSKRGGDLGFVCGNEMMKEFERPAFSLRRGEISAPVSTPSGFHII 135 Query: 271 A 271 Sbjct: 136 Y 136 >gi|262283150|ref|ZP_06060917.1| foldase prsA [Streptococcus sp. 2_1_36FAA] gi|262261402|gb|EEY80101.1| foldase prsA [Streptococcus sp. 2_1_36FAA] Length = 309 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 27/314 (8%), Positives = 78/314 (24%), Gaps = 40/314 (12%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + + + + + + S + T+ G+ IT + ++ + Sbjct: 1 MKKKIVAGAVTLLSVAVLAACGKTSGSDKDIITMKGDTITVSEFYDKVK-------SNPS 53 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + L ++ + +++ K + + + + + Sbjct: 54 AQQVLLNLTIKEVFEKQYGKKVTDKEVEEAYEKSSKAYGDNFARVLAQAGLTED------ 107 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 Q +V+ E E+ K + + ++ ++K Sbjct: 108 ----AYREQIRTNKLVEYAVK---KAAEKELTDENYKAAYESYTPEVTAQIIKVDSEDKA 160 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQF--QNL 249 + K + + G+ ++ + P + Sbjct: 161 KEVLAAAKA---------EGADFAQLAKDNSTDGDTKDKGGEIKFDSAATNVPDAVKKAA 211 Query: 250 LKKSQNNTTNPY-----VTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE-- 301 N ++ Q + + K + + K L K Sbjct: 212 FGLEANAVSDLVTVRSNQGQASYYIVKLVSKTEKSSKWEDYKDKLKQVILTAKQNNTSFI 271 Query: 302 AEYVKKLRSNAIIH 315 V K +A I Sbjct: 272 QSVVAKELKDANIK 285 >gi|46201422|ref|ZP_00055089.2| COG0760: Parvulin-like peptidyl-prolyl isomerase [Magnetospirillum magnetotacticum MS-1] Length = 623 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/190 (7%), Positives = 40/190 (21%), Gaps = 17/190 (8%) Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + F + D E + Q+ Sbjct: 213 LDAYYKDNLSRFMAPEYRALTVLLLRPADVANAIDIDEEMVRETYQQRIEEFSTPERRTV 272 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 ++ + + + + I + + ++DL Sbjct: 273 SQIVFDESSAAAKAT---------DMVTGGKDLAAVAKALNTDII-----ELGIVEKNDL 318 Query: 243 HPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 + K + T P T G + + + + Q ++ Sbjct: 319 PEGLAEAVFKLRAGATGQPVKTALGWHVVKVTQVQPGR--TRSFDEVKVQLEQDMRKEKA 376 Query: 302 AEYVKKLRSN 311 + + +L + Sbjct: 377 TDGLSELANR 386 >gi|330889993|gb|EGH22654.1| periplasmic folding chaperone [Pseudomonas syringae pv. mori str. 301020] Length = 208 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 19/173 (10%), Positives = 48/173 (27%), Gaps = 19/173 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + +I ++ + I + + + + +NGE I+ ++S+ + Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIIALMAFTGIEALFTATSNKQNAAEVNGEDISQNELSQAV 60 Query: 61 ALL-----------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + L + A + LI L Q + +F ++ Sbjct: 61 DMQRRQLAQQLAQQLGKDFDPAMLDEKLLRESAPKGLIDRKLLLQGATDAKFSFSDAALD 120 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 +Q F Q+ Q + +++ Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRLQF--RQMLGQEMLIGQVRAGV 171 >gi|329904824|ref|ZP_08273941.1| hypothetical protein IMCC9480_2247 [Oxalobacteraceae bacterium IMCC9480] gi|327547816|gb|EGF32582.1| hypothetical protein IMCC9480_2247 [Oxalobacteraceae bacterium IMCC9480] Length = 129 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 1/81 (1%) Query: 237 LLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPT 295 +DL P L+ + + + D +D A + Sbjct: 3 RTTADLPPPLVTKLQGMKKGQLFVIKENDRSLLVGLNDVKDSPVNAEAAAPQIEQFLRNQ 62 Query: 296 KIEKHEAEYVKKLRSNAIIHY 316 K ++ + + +LRS A + Y Sbjct: 63 KSQETAKDELARLRSIAKLEY 83 >gi|73540631|ref|YP_295151.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha JMP134] gi|72118044|gb|AAZ60307.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha JMP134] Length = 250 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 20/270 (7%), Positives = 59/270 (21%), Gaps = 26/270 (9%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 I+ EV+ + + + + L+ + ++ + + + Sbjct: 4 IVRIDDEVLGVEEFIRLLKFTGQ-----------FEGLVEQMVRDKLTVHAAKRAGMSLA 52 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + A + + I + + M + + Sbjct: 53 QEEIQERADQFRRVQGLHRAADMNHYLDALGVSLDEFEVFITDSLYQERMMEQV-CNDAA 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + Q + V+ S K + + + Sbjct: 112 VHEYFQLNSPRFDSIEVSHIVVDSEG-----------KAKELISYLQDDPDSFAEMAREH 160 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKG--VEYIAICDKRDLG 279 + G +L L + + + P+ E + K Sbjct: 161 SIADTRERGGDIGKVLRGSLKTDIEAKVFNAEAGDLLGPFPAADRSFFEVFLVRAKHPAT 220 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + + + E+V + R Sbjct: 221 LDSDVAVEVRRLLREEWLMARAQEHVIEAR 250 >gi|329113481|ref|ZP_08242262.1| Peptidyl-prolyl cis-trans isomerase D [Acetobacter pomorum DM001] gi|326697306|gb|EGE48966.1| Peptidyl-prolyl cis-trans isomerase D [Acetobacter pomorum DM001] Length = 639 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 34/395 (8%), Positives = 91/395 (23%), Gaps = 85/395 (21%) Query: 1 MTSKVF-TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISK 58 M S + + ++ +T + + F I + + + + ++ D++ Sbjct: 1 MISYLRRVFVESWLGRVTAIVIFLAFVGWGIGDVMGYMGEETDVVAKVGQQQVSSDDLAT 60 Query: 59 RIAL---------------LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + + ++ + LI + +K + + V Sbjct: 61 ALQSELPTIARQMGVSDPSHIPLAMQRQVAYQILHRLIGQAELLNTAQKLKVAVPDSAVR 120 Query: 104 YFF----VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK---------- 149 N F+ L +G+ + F + +++ Sbjct: 121 DEVFSLPYFKGANGQFDRASFNQKLHDRGLTEQRFLDMVRNDLTTRTILQPLAQAGSVSD 180 Query: 150 ---NDF-------------------MLKYGNLEMEIPANKQKMKNITVREYLIRT----- 182 F + + R +R Sbjct: 181 TMLQRFLTYGAKTRVVDFVSIPFAAQPTPKTPDDAVLQRYYNNHPWMFRTPELRHAKIVV 240 Query: 183 --------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 + + + + R E ++L ++ + A G Sbjct: 241 LSPQTVADSITMDEADIKRIYDEQKSRYNVPETRDIQLITLQDQAQATAIANAWKVGGNW 300 Query: 235 QYLLES-------DLH----------PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 Q + S ++ Q + + ++P T+ G + Sbjct: 301 QAIQNSAKDAAAVEMPNARPSTIPSTTLRQAVFHAPEGQVSDPLKTEGGWAVFRVTKITA 360 Query: 278 --LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 K + +Q E +KL+ Sbjct: 361 PHTTPYEDAKKDILSQYRAAVAPSVAGERKRKLQD 395 >gi|320540196|ref|ZP_08039851.1| putative peptidyl-prolyl cis-trans isomerase C (rotamase C) [Serratia symbiotica str. Tucson] gi|320029862|gb|EFW11886.1| putative peptidyl-prolyl cis-trans isomerase C (rotamase C) [Serratia symbiotica str. Tucson] Length = 131 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 10/78 (12%), Positives = 18/78 (23%), Gaps = 5/78 (6%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 +K R K++ G ++ + F + Sbjct: 39 EKLTNVLLVELKRGVSFDTLARKYSGCPSKRHGGSLGEFIKGSMVAAFDKAVFSIP--LL 96 Query: 259 NP---YVTQKGVEYIAIC 273 P TQ G I + Sbjct: 97 KPHGSVKTQFGYHIIKVL 114 >gi|3127915|emb|CAA06818.1| peptidylprolyl isomerase [Neurospora crassa] Length = 182 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 11/170 (6%), Positives = 34/170 (20%), Gaps = 1/170 (0%) Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + + F+S ++ + + + Sbjct: 10 PEDWEVRHSQSKNLPYYFNSATKTSRWEPPSGTDVDKLKIYMAKYHSPTSQQQQQQQQQQ 69 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + R + + Q + + + Sbjct: 70 PQGKIRCAHLLVKHNQSRRPSSWRESEITRTKQEALTTLQGFEQRIKSGSISLGELALTE 129 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + G Y D+ +F++ ++ T G+ I Sbjct: 130 SDCSSARKRGDLGYFGRGDMQKEFEDAAFALKPGEISDIVDTASGLHLIE 179 >gi|213402891|ref|XP_002172218.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Schizosaccharomyces japonicus yFS275] gi|212000265|gb|EEB05925.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Schizosaccharomyces japonicus yFS275] Length = 101 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 +I A+E + ++F+ G ++ + FQ+ K + + Sbjct: 18 EKHSKIMQAQEKLNAGERFDKVAQQFSED-KAKRGGNLGWMTRGSMVGPFQDAAFKLEPS 76 Query: 257 -----TTNPYVTQKGVEYIAICDKR 276 T T G I I K+ Sbjct: 77 KVDKPITTMVKTNFGYHIIMIEGKK 101 >gi|195583230|ref|XP_002081426.1| GD25716 [Drosophila simulans] gi|194193435|gb|EDX07011.1| GD25716 [Drosophila simulans] Length = 374 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/150 (9%), Positives = 37/150 (24%), Gaps = 8/150 (5%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + Q + + + + + + + Sbjct: 135 CRHILVKHNESDRCSSHRERVVRRTRQEALNMIMHARDLIQSGKCEFAELAKMISDCCSA 194 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 G L + F+ + + + + T G + R + Sbjct: 195 RHGGDLGPLSLTQTSFVFERNILLLNDGELSEIFQTNAGYHILL----RTPINFDNYRTQ 250 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 +S T I +A+ L+ + Y+ Sbjct: 251 MSRSLTKIVIANEKAKSKAHLKKS---KYF 277 >gi|268563356|ref|XP_002646914.1| Hypothetical protein CBG19616 [Caenorhabditis briggsae] gi|187024119|emb|CAP36829.1| hypothetical protein CBG_19616 [Caenorhabditis briggsae AF16] Length = 161 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 12/116 (10%), Positives = 29/116 (25%), Gaps = 1/116 (0%) Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 E+ + I +K ++ K+ +++ K Sbjct: 43 KGSELTQVQCLHLLVKHEGSRNPSSWRSDRITRSKEDAINILRNYEKELKDASDVQGKFR 102 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 ++F+ G + F++ ++ T GV I Sbjct: 103 ELAKQFSDCSSAKRGGDLGPFKRRQMQKPFEDASFALEVGEMSDIVDTDSGVHLIY 158 >gi|197118887|ref|YP_002139314.1| hypothetical protein Gbem_2510 [Geobacter bemidjiensis Bem] gi|197088247|gb|ACH39518.1| conserved hypothetical protein [Geobacter bemidjiensis Bem] Length = 526 Score = 48.1 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 42/132 (31%), Gaps = 11/132 (8%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHP--------QF 246 V++++ + + + + K L++ + G Y + + Sbjct: 389 AQVERKLLEVKGAEVAKKKAEEALQQLSKAGAATKETGNFGYSPAGAIPTVGTSPELMEA 448 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEY 304 L + P + + + ++ + KA + P K ++ ++ Sbjct: 449 AFALTPANPVAKQPVKVGERWYAVKLKNRVEAPTTDFAKASATIKQTLLPKKQQEELDKW 508 Query: 305 VKKLRSNAIIHY 316 +K LR A I Sbjct: 509 LKGLRDKAKIDI 520 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 35/258 (13%), Positives = 68/258 (26%), Gaps = 28/258 (10%) Query: 1 MTSKVF-TSLSDFIKLLTTY----FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD 55 M + S IK++ F+ IF + KS + ++G I+ D Sbjct: 1 MLGIMRKYKQSILIKIVFVVIVLSFIGTIFLVWGRGGDKSANGPAGYAAMVDGTKISMDD 60 Query: 56 ISKRIALLKLQ-------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 K + + L+K + +I L +E +K GI D + V Sbjct: 61 FQKNYYRTRNLYEQIYGRSLTPEMEKQMGLKKATISSMIDNVLTLKEAKKMGIKVDKDEV 120 Query: 103 NYFF--VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + +N G K + Q + +N K + Sbjct: 121 AAEIAKIPSFQNNGAFDFTLYQNTLKANRVTPKEFEETQEQDLLVQKARNKVKEKATVTD 180 Query: 161 MEIPANKQKMKNI--------TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 ++ +K + + + L N Q + + L Sbjct: 181 ADLMQEFKKQNDKVNLQYVSFSPADVKGSIKLTDAELNVYLQDHQAQFKTPEQVSIAYTL 240 Query: 213 PKDCNKLEKFASKIHDVS 230 K + + Sbjct: 241 VSPAALAAKVSVTPEEAQ 258 Score = 40.0 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 2/66 (3%) Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHE 301 QN P T KG+ + + DK+ + ++A + + K + Sbjct: 345 ELVARAFALKQNELGGPVETAKGIYLLKVLDKKPSVVPPLAQVRAQVERKLLEVKGAEVA 404 Query: 302 AEYVKK 307 + ++ Sbjct: 405 KKKAEE 410 >gi|195336282|ref|XP_002034770.1| GM14286 [Drosophila sechellia] gi|194127863|gb|EDW49906.1| GM14286 [Drosophila sechellia] Length = 374 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 14/153 (9%), Positives = 40/153 (26%), Gaps = 8/153 (5%) Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + R + + Q + K + + + + + + Sbjct: 135 CRHILVKHNESDRCSSYRERVVRRTRQEALNKIMHARDLIQSGKCEFAELAKMISDCCSA 194 Query: 229 VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA-----ICDKRDLGGEI 282 G L + F+ + + + + T G + + R Sbjct: 195 RHGGDLGPLSLTQTSFVFERNILLLNDGELSEIFQTNAGYHILLRTPINFDNYRTKMSRS 254 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKL--RSNAI 313 K ++ + +K +++Y L + A Sbjct: 255 LTKIVIANEKAKSKAHLKKSKYFYNLTKKQKAF 287 >gi|284050762|ref|ZP_06380972.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Arthrospira platensis str. Paraca] Length = 274 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/254 (8%), Positives = 60/254 (23%), Gaps = 7/254 (2%) Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 L + + ++Q L ++ + + + N + Sbjct: 25 FLTINDNDSITLSQSLQYLQNSGKLQEFLANILRQYVIDKELQSRDDTNSNAAAIEQAVI 84 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 +F ++ + D Q + + F + N +K + R Sbjct: 85 NFRLERNLSDPQAFQTWLDE---NRLTYKSFHDQVSNGFKRETLKLAVVKENLEEYFQER 141 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + + +++ G + ++ Sbjct: 142 KPFLDSVVMSRIVVDDYEMAQSLKSKIDSGEGSFEALAREYSVTTERRVNGMMGAVSKAT 201 Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 L + ++ P+ + I + ++ E + Q ++ Sbjct: 202 LPDTLKPTIEGAKVGQIIGPFEVEGRWCLFRIEEFIEVTLET---KGIKKQLQDELFDRW 258 Query: 301 EAEYVKKLRSNAII 314 E +K L I Sbjct: 259 MNEQLKTLTVKMQI 272 >gi|302417108|ref|XP_003006385.1| peptidyl-prolyl cis-trans isomerase ssp-1 [Verticillium albo-atrum VaMs.102] gi|261353987|gb|EEY16415.1| peptidyl-prolyl cis-trans isomerase ssp-1 [Verticillium albo-atrum VaMs.102] Length = 177 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 9/92 (9%), Positives = 21/92 (22%), Gaps = 1/92 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + E+ + + + G Y + Sbjct: 83 RPSSWRQEKIDRTKEDAYSIIRGYEEKIKSGQSSLGDLAVTESDCSSARKRGDLGYFGQG 142 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 D+ +F+ + T G+ I Sbjct: 143 DMQREFEEAAFALKVGEVSGIIETASGLHLIE 174 >gi|223996533|ref|XP_002287940.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220977056|gb|EED95383.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 225 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 6/83 (7%), Positives = 22/83 (26%), Gaps = 4/83 (4%) Query: 212 LPKDCNKLEKFASKIH-DVSIGKAQYLLESDL---HPQFQNLLKKSQNNTTNPYVTQKGV 267 + C +K++ ++ G L + + + P + G Sbjct: 80 VDAFCIAAKKYSQDKDVAINGGLLGTLAPQGYCRAKELDKACYEVPLGEVSGPIESDYGY 139 Query: 268 EYIAICDKRDLGGEIALKAYLSA 290 + + ++ + + Sbjct: 140 HLLLVTERTNCPKLDGGYTEIRR 162 >gi|254483636|ref|ZP_05096858.1| PPIC-type PPIASE domain protein [marine gamma proteobacterium HTCC2148] gi|214036098|gb|EEB76783.1| PPIC-type PPIASE domain protein [marine gamma proteobacterium HTCC2148] Length = 284 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/196 (10%), Positives = 60/196 (30%), Gaps = 10/196 (5%) Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + ++ ++ + +L E K + + + +LF++ Sbjct: 74 WQYQLGLEAYQRDFVFRQYRESLQTPDFSDLAQERYKLKYEKIAAIPEKRVSSHILFAVK 133 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246 + + + + + + +++ + V +++ +L Sbjct: 134 LGSSGKREEITPKAQGVLDQLRAGADFSKMVAEYSDEPGAVEKDGKFDKWVAYGELGVSP 193 Query: 247 QNLL----KKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKH 300 + S ++ TQ G+ I + ++ +KA + + I Sbjct: 194 RYTNGLFSIASVGEYSDLVSTQFGIHIIRLDGIQEKSYKPYEEVKADIIKELEAEYISLS 253 Query: 301 EAEYVK--KLRSNAII 314 EYV + NA+I Sbjct: 254 MKEYVGGFNITENAVI 269 >gi|325954706|ref|YP_004238366.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Weeksella virosa DSM 16922] gi|323437324|gb|ADX67788.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Weeksella virosa DSM 16922] Length = 720 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 11/113 (9%), Positives = 37/113 (32%), Gaps = 2/113 (1%) Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYL-LESDLHPQFQNLL 250 + + E++ + EK++ G ++ ++ L P +++ + Sbjct: 379 SKEEAKKLAETYLAEAKANPSQFGALAEKYSDDKGSATQKGSIGWVGQQNALTPVYRSFI 438 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 T + ++ G I + + ++ G + + +K + Sbjct: 439 FSKPVGTIDLVESEFGYHIIRVDEAKNKTGYQFAHLVKKIEPSKETSDKAFND 491 Score = 38.1 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 25/246 (10%), Positives = 65/246 (26%), Gaps = 26/246 (10%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKS-----WAMSSRIRTTINGEVITDGDISKRI----AL 62 ++ ++ L+ F + S S +A + T+NGE I G+ I + Sbjct: 12 WVIMIVIGVALVAFITGDLFSENSAIRKVFAGDPSVVGTVNGEKIGIGEYQNAINLTTNM 71 Query: 63 LKLQKI---NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 L+ Q + + L+ + +Q + G+ F Q+ Sbjct: 72 LQAQGQNVTPNQAAQQTWASLVSSKIVQQIADNIGLKVSDEEFWDFVAQNFGMGSGDEAK 131 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSI------WPDVVKNDFMLKYGNL--------EMEIPA 165 + +Q N + ++ + +++ Sbjct: 132 NNIAQLEQAASANPEMMQQYQGWLSTANAIRSQLMLQKYSSYVKATTLVTSKEADIQQTY 191 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 N + + ++ K+ E + + A+ Sbjct: 192 NAEMATIDYAKVDYGTLEKKLNVKVSDEDIKAYVKKHPKQFEVQPMVKLAYTFFPAKATA 251 Query: 226 IHDVSI 231 + ++ Sbjct: 252 ADEQAV 257 >gi|220930452|ref|YP_002507361.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium cellulolyticum H10] gi|220000780|gb|ACL77381.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium cellulolyticum H10] Length = 363 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/300 (9%), Positives = 77/300 (25%), Gaps = 35/300 (11%) Query: 36 WAMSSRIRTTINGEVITDGD------------ISKRI----------ALLKLQKINGELE 73 ++MSS + IT + + + +++ Sbjct: 35 FSMSSGDVGKVGELSITKQEYLVLSKFNMNSFLQNAQSADPAKFDWNQKYQGSTAKEQIK 94 Query: 74 KIAVQELIVETLKKQEIEKSGITF---DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 K + + ++ + +++GI D + + Q +N G S L + Sbjct: 95 KATLDSIQEIKIQLIKAKEAGIKLEKTDLDNIEAAINQRIQNAGGSRSQADKQLKQDYGV 154 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + + + + K + E+ K + + ++ + Sbjct: 155 SLADYKEVYKELVLSQKYIESERNKVKVPDEEVKKQYDDHKADYDKVTVTHILIATQDLQ 214 Query: 191 KLQNQGF-----VQKRIKDAEESRLRLPKDCNKLEKFASKIHD----VSIGKAQYLLESD 241 + + ++ + EK + + G ++ Sbjct: 215 TGAAFTEGKKKEAKDKAENLLKQIQEGADMQALAEKNSDDKDQNGAVNNKGVYTFVKGQM 274 Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 + + T T G + +KR+ +K + + K E Sbjct: 275 VPQFEDWAFANRKAGDTGIVETSYGYHVMR-FEKREETKYDDVKDQIKSTILNKKFEDEF 333 >gi|260103202|ref|ZP_05753439.1| peptidylprolyl isomerase [Lactobacillus helveticus DSM 20075] gi|260082993|gb|EEW67113.1| peptidylprolyl isomerase [Lactobacillus helveticus DSM 20075] Length = 306 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/285 (9%), Positives = 73/285 (25%), Gaps = 33/285 (11%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91 + S + ++ + G IT + + K A+ +I+ +Q+ Sbjct: 28 AACSNSGNNATVASYKGGKITQQQYYDEMK-------KSQAGKSALANMIINRALEQQYG 80 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 K + + + + + + + Q++ +++ Sbjct: 81 KYVSSKKVDKKYSNYKKQYGSQFSAVLQQNGMTASTF-----------KQNLKTNLLSEA 129 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + + K V + Q + + +S + Sbjct: 130 ALKHINKISKKQEQQAWKNYQPKVT-----VQHILVAKKSTAESIIKQLKDGKSFKSLAK 184 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEY 269 + A K+ + L F+ K T P +Q G Sbjct: 185 KYSLDTATKNKAGKLPAFDSTD------NTLDSAFKTAAFKLKTGEVTESPVKSQSGYHV 238 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNA 312 I + G K + + + + + + + NA Sbjct: 239 IKMISHPAKGKFADHKKAIDDEIYASMAQDQAVMKDVIATVLKNA 283 >gi|302893486|ref|XP_003045624.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256726550|gb|EEU39911.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 177 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 10/98 (10%), Positives = 25/98 (25%), Gaps = 2/98 (2%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD-CNKLEKFASKIHDVSIGKA 234 + R +++ + I+ E+ + G Sbjct: 77 KHRDSRRPSSWREAEITRSKEDAYQIIQAHEDKIKSGSITLGELALTESDCSSARKRGDL 136 Query: 235 QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 Y + D+ +F++ + T G+ I Sbjct: 137 GYFGKGDMQKEFEDAAFGLQPGQMSGIVETASGLHLIE 174 >gi|157151667|ref|YP_001450850.1| foldase protein PrsA [Streptococcus gordonii str. Challis substr. CH1] gi|189037918|sp|A8AYJ0|PRSA_STRGC RecName: Full=Foldase protein prsA; Flags: Precursor gi|157076461|gb|ABV11144.1| proteinase maturation protein, putative [Streptococcus gordonii str. Challis substr. CH1] Length = 309 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 27/314 (8%), Positives = 77/314 (24%), Gaps = 40/314 (12%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + + + + + + S + T+ G+ IT + ++ + Sbjct: 1 MKKKIVAGAVTLLSVAVLAACGKTSGSDKDIITMKGDTITVSEFYDKVK-------SNPS 53 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + L ++ + +++ K + + + + + Sbjct: 54 AQQVLLNLTIKEVFEKQYGKKVTDKEVEEAYEKSSKAYGDNFARVLAQAGLTED------ 107 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 Q +V+ E E+ K + ++ ++K Sbjct: 108 ----AYREQIRTNKLVEYAVK---KAAEKELTDENYKAAYEAYTPEVTAQIIKVDSEDKA 160 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQF--QNL 249 + K + + G+ ++ + P + Sbjct: 161 KEVLAAAKA---------EGADFAQLAKDNSTDGDTKDKGGEIKFDSAATNVPDAVKKAA 211 Query: 250 LKKSQNNTTNPY-----VTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE-- 301 N ++ Q + + K + + K L K Sbjct: 212 FGLEANAVSDLVTVRSNQGQASYYIVKLVSKTEKSSKWEDYKDKLKQVILTAKQNNTSFI 271 Query: 302 AEYVKKLRSNAIIH 315 V K +A I Sbjct: 272 QSVVAKELKDANIK 285 >gi|332885978|gb|EGK06222.1| hypothetical protein HMPREF9456_00096 [Dysgonomonas mossii DSM 22836] Length = 673 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/276 (9%), Positives = 71/276 (25%), Gaps = 47/276 (17%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 ++ + Y + I+G+ + ++ K + + +GE Sbjct: 6 LVFFLITLHATFYLHAQQVDPVAIQIDGKPVFKSELEKAYRESNVSRSDGE--------- 56 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 +E + + A+ + + + Q Sbjct: 57 -------KESLPDFVQSYIDFRLNIAEAKAQRIDTTGNYIRDLSAARVGMSRKYMQDTIC 109 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 ++ + + N + + K+ Sbjct: 110 ENDYLLKIYNRMQQNVEI-----------------------NHVLVPFEEKIIYPADTVV 146 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIH-------DVSIGKAQYLLESDLHPQFQNLLKKS 253 + A + + RL K+ E ++ + + G ++ + + + + Sbjct: 147 LYQKAIDLQGRLSKNGFAAEGYSKVLSSSTVLDYNRQNGYIGWVAPFMFNAKVEQAIYSL 206 Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 N + P G I + +KR G + ++ L Sbjct: 207 HVNEVSMPIRCSDGYHIIQVLNKRPAVGSVDIEQVL 242 Score = 43.1 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 5/75 (6%) Query: 239 ESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 ES L P F K + + + P ++ G I + K + +K+ L A+ Sbjct: 301 ESRLSPTFIEAAFNLKKEGDVSEPVQSEYGFHIIRLLKKIPVPSYADMKSALKARILE-- 358 Query: 297 IEKHEAEYVKKLRSN 311 E + R Sbjct: 359 -SDKSEEMTIEKRKR 372 >gi|212527902|ref|XP_002144108.1| peptidyl-prolyl cis-trans isomerase [Penicillium marneffei ATCC 18224] gi|210073506|gb|EEA27593.1| peptidyl-prolyl cis-trans isomerase [Penicillium marneffei ATCC 18224] Length = 129 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K + +F+ G + + LH F+ + + + + Sbjct: 46 EKHSKKEEALEKLRNGAKFDDVAREFSED-KARQGGSLGWKVRGSLHGDFEKVAYELEPS 104 Query: 257 TTNP-----YVTQKGVEYIAICDKR 276 TT T G I + ++ Sbjct: 105 TTASPKYAEVKTGFGYHIIMVEGRK 129 >gi|86159490|ref|YP_466275.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-C] gi|85776001|gb|ABC82838.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-C] Length = 587 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 27/289 (9%), Positives = 64/289 (22%), Gaps = 28/289 (9%) Query: 31 VSYKSWAMSSRIRTTINGE-VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + R I GE IT D++ + + E Sbjct: 319 PGFAVLVKDKRPIARIAGEAPITVSDLANAVG--------------------EKFFHGVE 358 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 + D + Q ++ V+ Sbjct: 359 KPQQEKRVDKLKRPRLDGLIYKRVFTKEARVRKL--DQSEEYLRAVADQENSLVFGTFVQ 416 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + ++ A ++ L R + PD K + + + Sbjct: 417 RVLVPDVSIKDADLRAYYDGHRDEFTAAPLYRLDQLAFPDMKGAQRAAERLARGTDFKWL 476 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 + + A + L DL + P +G Sbjct: 477 KANAEGQLAPAQRALDFEGQLLSAKG--LPEDLAGALASAQVGDYRMHQGPR--GQGYVV 532 Query: 270 IAICDKRD-LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + + + + + + + ++ KLR+ I + Sbjct: 533 LVVSRTDPQVQPYEEARKDIQKKLFGQALNRAVTDWAAKLRAAHDIETF 581 Score = 45.8 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 27/278 (9%), Positives = 66/278 (23%), Gaps = 53/278 (19%) Query: 43 RTTINGEVITDGDISKRIALL----KLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98 I+ +V+ D+ + +A K+ +Q +I L E + G+ Sbjct: 74 IARIDDQVVPLADLQEALASTHGERSAGAATAPDFKVVLQRIIDSRLLIMEAREMGLDEL 133 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158 + + ++ Sbjct: 134 PELKEQL-------------------------------AVFKDVTLRETLQQQVTKDVKP 162 Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 +E+ ++ ++ + + Sbjct: 163 DALEVERVYKESVRR---------------WKVRSLLFQKEEDAAAVKPALAGGKSFVEL 207 Query: 219 LEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 ++ ++ G+ + L L L + T P Q G + + D Sbjct: 208 AKQLVAEKKADGSGEPEVLPPDQILPAVAAALQPLHKGEVTAPLKLQNGFAILYVEDL-V 266 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKL-RSNAII 314 + A +A A + + + + K+L R I Sbjct: 267 YPDDPAKRAEAEAASIDRQGGQILIAFRKELDRKYVKI 304 >gi|148547870|ref|YP_001267972.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida F1] gi|148511928|gb|ABQ78788.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida F1] Length = 91 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 26/86 (30%), Gaps = 4/86 (4%) Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNK---LEKFASKIHDVSIGKAQYLLESDLHPQF 246 K Q + + K +AE+ R R+ +K + G + + Sbjct: 1 MKAQARHILVKTADEAEKLRQRIANGEAFDVLAKKCSLCPSGKRGGDLGEIRPGQMVGAI 60 Query: 247 QNLLKKSQNNTT-NPYVTQKGVEYIA 271 ++ K P ++ G + Sbjct: 61 DQVIFKKPLRVVHGPIKSKFGYHLVQ 86 >gi|242785190|ref|XP_002480544.1| peptidyl-prolyl cis-trans isomerase [Talaromyces stipitatus ATCC 10500] gi|218720691|gb|EED20110.1| peptidyl-prolyl cis-trans isomerase [Talaromyces stipitatus ATCC 10500] Length = 127 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 29/85 (34%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K + +++ G + + LH F+ + + + + Sbjct: 44 EKHSKKEEALEKLRNGAKFDDVAREYSED-KARQGGSLGWKVRGSLHGDFEKVAYELEPS 102 Query: 257 TTNP-----YVTQKGVEYIAICDKR 276 TT T G I + ++ Sbjct: 103 TTANPKYAEVKTGFGYHIIMVEGRK 127 >gi|197123566|ref|YP_002135517.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. K] gi|196173415|gb|ACG74388.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp. K] Length = 590 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 30/286 (10%), Positives = 68/286 (23%), Gaps = 53/286 (18%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALL----KLQKINGELEKIAVQELIVETLKKQEI 90 S + I+ +V+ ++ + +A K K +Q LI L E Sbjct: 69 SPLFTQTPVARIDDQVVRLAELQEALATTHDERKAGAATAPDFKAVLQRLIDSRLLIMEA 128 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 + G+ V ++ Sbjct: 129 REMGLDEAPEVKEQLTVF-------------------------------KDVTLRQTLQQ 157 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 +E+ ++ ++ + + Sbjct: 158 QVTQDVKPDALEVERVYKESVRR---------------WKVRSLLFQKEEDAAAVKPALA 202 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 ++ ++ G+ + L L L + + T P QKG Sbjct: 203 GGKGFVELAKQLVAEKKAEGSGEPEVLPPDQTLPVVTTALQRLQKGQATPPLKLQKGFAI 262 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL-RSNAII 314 + + D + A +A + + + + K+L R I Sbjct: 263 LYVEDI-VYPDDPAKRAEAEKASVDRQSGQVLTAFRKELDRKYVKI 307 Score = 45.1 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 31/291 (10%), Positives = 68/291 (23%), Gaps = 32/291 (10%) Query: 31 VSYKSWAMSSRIRTTINGE-VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + R I GE IT D++ + + E Sbjct: 322 PGFAVLVKDKRPIVRIAGEAPITVADLANAVG--------------------EKFFHGVE 361 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 + D + Q + ++ V+ Sbjct: 362 KPQQEKRVDKLKRPRLDGLIYKRVFTKEARVRKL--DQSEEYLRAVEEYENSLVFGTFVQ 419 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + ++ A ++ L R + PD K + + + Sbjct: 420 RVLVPDVSLKDDDLRAYYDGHRDEFTAAPLYRLDQLAFPDMKGAQRATERLARGTDFKWL 479 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV-E 268 + + A G+ L L L +Q + +G Sbjct: 480 KANAEGQLPPAQRALDFE----GQL--LSAKGLPEDLAGALASAQVGDYRLHQGPRGQGY 533 Query: 269 YIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + + D + K + + + + ++ KLR I Y Sbjct: 534 VVQVVSRTDPQVQPFEEAKPDIQKKLFGQALNRAVTDWAAKLRDAHRIETY 584 >gi|227822015|ref|YP_002825986.1| peptidyl-prolyl cis-trans isomerse D [Sinorhizobium fredii NGR234] gi|227341015|gb|ACP25233.1| peptidyl-prolyl cis-trans isomerse D [Sinorhizobium fredii NGR234] Length = 630 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 34/396 (8%), Positives = 86/396 (21%), Gaps = 86/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----I 56 M + + I +++ F + + S + T+ ++ D Sbjct: 1 MLDSLRNAAQTRIVKGLLAILILSFMVWGGQTLMVTGTSDAVV-TVGDVKVSTSDYRLAY 59 Query: 57 SKRIALLKLQKINGELEKI------------------AVQELIVETLKKQEIEKSGITFD 98 ++++LL Q + A+ +L + ++ Sbjct: 60 ERQLSLLSRQLGTPLTRQQARAFGVEAQVYSQLVAGAALDQLAEDMNLGLSEDRLARLIG 119 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS---------------- 142 + + S+ ++ L +Q N + + Q Sbjct: 120 EDPAFHGANGQFDRMTFSSVLRNAGLTEQDYIKNRSQVAVRSQIVDALSDGFAAPAILVD 179 Query: 143 -----------IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR---------- 181 I ++ N + ++ A + R R Sbjct: 180 AVGKYRHETRTIDYLLLSNANIDAVKAPGDDVLAPWFESHKANYRAPEYRKFSYIKLEPE 239 Query: 182 ----------TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 L + + + ++ R + R D + A D + Sbjct: 240 DLVVNDAVTDEELRADYEKRKESFRTAATRTIEQLAFPSREAADAGAAKLSAGTSFDDLV 299 Query: 232 GKAQY---------LLESDLHPQ---FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + + Q S T G + + + R Sbjct: 300 KAEGKSAADVLLGDFTKERMPDQKAAEAAFAVASDGGVTPVVEGAFGPVILRVTNIRQET 359 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + + + L I Sbjct: 360 V--RSFDEVKEELRKDIALSVARDQLVGLHDK--IE 391 >gi|227878123|ref|ZP_03996103.1| peptidylprolyl isomerase [Lactobacillus crispatus JV-V01] gi|256843679|ref|ZP_05549167.1| peptidylprolyl isomerase [Lactobacillus crispatus 125-2-CHN] gi|256850147|ref|ZP_05555577.1| peptidylprolyl isomerase [Lactobacillus crispatus MV-1A-US] gi|262047710|ref|ZP_06020663.1| peptidylprolyl isomerase [Lactobacillus crispatus MV-3A-US] gi|293380430|ref|ZP_06626499.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus crispatus 214-1] gi|295693412|ref|YP_003602022.1| parvulin-like peptidyl-prolyl isomerase [Lactobacillus crispatus ST1] gi|227862293|gb|EEJ69832.1| peptidylprolyl isomerase [Lactobacillus crispatus JV-V01] gi|256615099|gb|EEU20300.1| peptidylprolyl isomerase [Lactobacillus crispatus 125-2-CHN] gi|256713119|gb|EEU28110.1| peptidylprolyl isomerase [Lactobacillus crispatus MV-1A-US] gi|260571995|gb|EEX28562.1| peptidylprolyl isomerase [Lactobacillus crispatus MV-3A-US] gi|290923009|gb|EFD99942.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus crispatus 214-1] gi|295031518|emb|CBL50997.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus crispatus ST1] Length = 298 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 24/313 (7%), Positives = 69/313 (22%), Gaps = 41/313 (13%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + ++K + + + S + + G IT + Sbjct: 1 MKSYMKKIAAVVAVAGVALSTAACSNSGTKA--TVASYKGGKITQEQYYDEMK------- 51 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + K + +I+ +Q+ K + + + + S Sbjct: 52 KSQAGKSTLANMIINRALEQQYGKYVSQKKVD----------KQYNNYKKQYGSQFSAVL 101 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + + + + + ++ +L Sbjct: 102 QQNGMTASSFKQNIKTNLLSEQALKHIKKVTKKQEQQAW----KSYQPKVTVQHIL---- 153 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESD---LHP 244 + + + +K++ GK +D Sbjct: 154 -------VAKKSTAQSIIKQLKDGKSFKVLAKKYSLDTATKNKAGKLPSFDSTDTTLDSS 206 Query: 245 QFQNLLKKSQNNT-TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-- 301 K + P +Q G I + G K + Q + + Sbjct: 207 FKTAAFKLKTGEVTSTPVKSQSGYHVIKMISHPAKGKFADHKKAIDDQIYASMAQDQATM 266 Query: 302 AEYVKKLRSNAII 314 + + + A + Sbjct: 267 KDVIATVLKKADV 279 >gi|254569388|ref|XP_002491804.1| Peptidylprolyl-cis/trans-isomerase (PPIase) [Pichia pastoris GS115] gi|238031601|emb|CAY69524.1| Peptidylprolyl-cis/trans-isomerase (PPIase) [Pichia pastoris GS115] gi|328351696|emb|CCA38095.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Pichia pastoris CBS 7435] Length = 168 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 11/160 (6%), Positives = 37/160 (23%), Gaps = 5/160 (3%) Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + + + + + S +++ K + ++ Sbjct: 10 RNWTIKISKTHQSEYFYNKETQESSWEPPSGTNLEALGEYIKKRLHDPEQVR----CAHL 65 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + + + + P + ++K ++ + G Sbjct: 66 LVKHKNSRKPSSWKEPQITRTKEEAIEKLRGFQKQILDGSATLGQLAATESDCSSHARNG 125 Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 +HP F+ ++ + GV I Sbjct: 126 DLGLFGRKTMHPSFERAAFALQVGEISDIVESDSGVHLIE 165 >gi|149185664|ref|ZP_01863980.1| hypothetical protein ED21_21604 [Erythrobacter sp. SD-21] gi|148830884|gb|EDL49319.1| hypothetical protein ED21_21604 [Erythrobacter sp. SD-21] Length = 285 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 33/81 (40%), Gaps = 2/81 (2%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELE 73 + L++ + + A + ++ T++G IT G I+ + +Q + N EL Sbjct: 1 MRNVITLLLCSTLLVACEGGEAPTGQVAATVDGREITVGQINDELRASGIQADQSNEELA 60 Query: 74 KIAVQELIVETLKKQEIEKSG 94 A+ +I ++ E Sbjct: 61 NRALDAIINRSILAAEARDRE 81 >gi|222056568|ref|YP_002538930.1| hypothetical protein Geob_3486 [Geobacter sp. FRC-32] gi|221565857|gb|ACM21829.1| conserved hypothetical protein [Geobacter sp. FRC-32] Length = 526 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 26/249 (10%), Positives = 70/249 (28%), Gaps = 6/249 (2%) Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 E++ A + I + ++ E T + N A + G+ ++ F K Sbjct: 275 AEVKDRAKADAIKQKGTREAYETVADTINKNLKGGDIKAAAASLGVKVDETPLFTAKTAP 334 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + + ++ + + + + + K V + Sbjct: 335 APLADEGEVIKRAFL--LKQGELGGPIETAKGIYIIKVMEKKPAAVPPLAEIKGQLTQKV 392 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + + +K+ ++A + E A + + F Sbjct: 393 TEEKARELAKKKAEEALAQLAKGTGTVKTQETGAFAYAANGVIPRIGTSPDLMEAAFNLT 452 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKK 307 T + + + + +L K + P K ++ ++K+ Sbjct: 453 AAAPTPKNT--FKAGDRWYAVKLKQRIELNRADFQKNKEQIRQTLLPKKQQEALDNWMKE 510 Query: 308 LRSNAIIHY 316 L++ A I Sbjct: 511 LKAKAKIQI 519 Score = 45.1 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 20/191 (10%), Positives = 57/191 (29%), Gaps = 19/191 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFC--IVPIVSYKSWAMSSRIRTTINGEVITDGDISK 58 M + + + +++ F I + +NG I+ D K Sbjct: 1 MLGIMRKYKQSVLIKIVFCIIVLSFVGTIFLVWGRGDETTGGDFAAKVNGTKISMDDYLK 60 Query: 59 RIALLKLQKI-------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 +K + K+A+ LI L +E ++ GI + + + Sbjct: 61 NYDRMKSLYQQIYGQAMTPDLEKQLGIRKMAINSLIDNALIVKEAKRMGIAVNKDEIANE 120 Query: 106 F---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 ++ + + ++ L + +F++ + + + + + + Sbjct: 121 IAKVPAFQKDGVFNFDQYTQMLKAYRMTPANFEEGQEQEMLVKKA-REKVKERATVSDQD 179 Query: 163 IPANKQKMKNI 173 + K + Sbjct: 180 LQQAFNKQNDK 190 >gi|326503622|dbj|BAJ86317.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 221 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 6/76 (7%), Positives = 18/76 (23%), Gaps = 1/76 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 ++ + + G + + F+ + Sbjct: 142 DAADLARALRDQIAAGELQFDAAARDNSDCNSAKRGGDLGPFEKGKMQKPFEKAVIALKV 201 Query: 255 NNTTNPYVTQKGVEYI 270 + ++ T+ GV I Sbjct: 202 GDMSDVVDTESGVHII 217 >gi|281208876|gb|EFA83051.1| hypothetical protein PPL_03839 [Polysphondylium pallidum PN500] Length = 254 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 7/88 (7%), Positives = 27/88 (30%), Gaps = 1/88 (1%) Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + + + +++ + + + + ++F+ G + Sbjct: 164 WRQDNITITKEEAIKQLQEYRNQIQTGQNSFESLAKQFSDCSSAKHGGMLDAFTRGQMQK 223 Query: 245 QFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 F+++ ++ T GV I Sbjct: 224 PFEDMSFSLQVGQLSDIVSTDSGVHIIE 251 >gi|71031999|ref|XP_765641.1| peptidyl-prolyl cis-trans isomerase [Theileria parva strain Muguga] gi|68352598|gb|EAN33358.1| peptidyl-prolyl cis-trans isomerase, putative [Theileria parva] Length = 116 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 6/60 (10%), Positives = 15/60 (25%), Gaps = 1/60 (1%) Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIA 271 + + G + + + F + N ++ T G+ I Sbjct: 54 QEFRRLATAKSECSSARKGGDLGFFDRNTMQKPFTEASFNLKVNEISDLVETDSGIHLIY 113 >gi|84999748|ref|XP_954595.1| peptidylprolyl isomerase [Theileria annulata] gi|65305593|emb|CAI73918.1| peptidylprolyl isomerase, putative [Theileria annulata] Length = 142 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 13/139 (9%), Positives = 38/139 (27%), Gaps = 1/139 (0%) Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + ++ + ++ +K+ R + R ++ K + Sbjct: 1 MIRNFLNFLWNNTSLRFLIINTIIFAMDKVRCAHLLLKHTGSRNPVNRNTGMAVTRTKEE 60 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252 ++ ++ +S + + G + + + F + K Sbjct: 61 AVSEMKGYLEMLRKSDNLDQEFRRLATAKSECSSARKGGDLGFFDRNTMQKPFTEASFKL 120 Query: 253 SQNNTTNPYVTQKGVEYIA 271 N ++ T GV I Sbjct: 121 EVNEISDLVETDSGVHLIY 139 >gi|154298944|ref|XP_001549893.1| hypothetical protein BC1G_11719 [Botryotinia fuckeliana B05.10] gi|150857624|gb|EDN32816.1| hypothetical protein BC1G_11719 [Botryotinia fuckeliana B05.10] Length = 124 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 28/81 (34%), Gaps = 6/81 (7%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260 ++ +A + + + + + G + DL +F+ + + + +TT Sbjct: 45 KMTEALQKLEAGASFDSVAREMSED-KARAGGALGWKGRGDLDAEFEKVAFEMEASTTAK 103 Query: 261 -----YVTQKGVEYIAICDKR 276 T G + + ++ Sbjct: 104 PKYREVKTGFGYHILMVEGRK 124 >gi|313498907|gb|ADR60273.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida BIRD-1] Length = 91 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 5/76 (6%), Positives = 17/76 (22%), Gaps = 1/76 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++ +K + G + + ++ K Sbjct: 11 KTADEAEKLKQRIANGEAFDVLAKKCSLCPSGKRGGDLGEIRPGQMVGAIDQVIFKKPLR 70 Query: 257 TT-NPYVTQKGVEYIA 271 P ++ G + Sbjct: 71 VVHGPIKSKFGYHLVQ 86 >gi|223998206|ref|XP_002288776.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220975884|gb|EED94212.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 55 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 16/55 (29%), Gaps = 1/55 (1%) Query: 222 FASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 + + G + F Q ++ P TQ G I I ++ Sbjct: 1 HSGCPSAKNGGSLGEFGPGMMVKNFDQVCFNEAVGVVHGPISTQFGEHLILITER 55 >gi|257069381|ref|YP_003155636.1| SurA-like protein [Brachybacterium faecium DSM 4810] gi|256560199|gb|ACU86046.1| SurA-like protein [Brachybacterium faecium DSM 4810] Length = 269 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 65/176 (36%), Gaps = 12/176 (6%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQK-----------INGELEKIAVQELIVETLKKQE 89 + T+NGE I+ + ++ Q L++ ++L+ L Q Sbjct: 75 DVVATVNGEDISKDEFTQIYESQFQQMAMQQQSTGEEVDQAALKQQVAEQLVDNHLLLQG 134 Query: 90 IEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 ++GI ++ + A+ G SA++ S L++QG+ + ++ A Q + + Sbjct: 135 ASEAGIEPTDEDIDATLEEIAQQNGLGSADEVVSTLEQQGMSEEDVREDAASQHMLTAYI 194 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 + + ++ + E Q ++ + V Q V ++ + Sbjct: 195 EQEADIEEPSEEELQAQYDQLVEQQSQAGGESSEVPPFEDVQDQLAQQTVAQQQNE 250 >gi|154496043|ref|ZP_02034739.1| hypothetical protein BACCAP_00327 [Bacteroides capillosus ATCC 29799] gi|150274598|gb|EDN01662.1| hypothetical protein BACCAP_00327 [Bacteroides capillosus ATCC 29799] Length = 426 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 26/254 (10%), Positives = 69/254 (27%), Gaps = 22/254 (8%) Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A ++I + E + + ++ +G + + D Sbjct: 134 AAFNQVIRN--QCAERNITLTDEEKAELDQQLADAVETSGGQDAFELALKEVNRTEDGLR 191 Query: 135 KQYLAIQSIWPDVVKNDFMLK--YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 Y A ++ + F K E+ + V+ L +TV S Sbjct: 192 SMYEASNFLYASLQNQLFPAKDAASLTAEELAQWAADNGKMQVKHILFKTVDDSGNALSD 251 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEK----------FASKIHDVSIGKAQYLLESDL 242 + + +++ +D N ++ ++ G E ++ Sbjct: 252 EEKEAAKQKAEDTLAQLQASDDMENLFDQLMNELSEDGRYSDGTLGAPDGYL--FGEGEM 309 Query: 243 HPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 +F++ K ++ + T G + L + + A + Sbjct: 310 VQEFEDAAKALGEHELSGIVETSYGYHILL-----RLPVDTEMAREAWASEQEANLSTQM 364 Query: 302 AEYVKKLRSNAIIH 315 + + A++ Sbjct: 365 NDQMTTWMDEAVVE 378 >gi|220918358|ref|YP_002493662.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-1] gi|219956212|gb|ACL66596.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter dehalogenans 2CP-1] Length = 587 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 29/286 (10%), Positives = 63/286 (22%), Gaps = 53/286 (18%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALL----KLQKINGELEKIAVQELIVETLKKQEI 90 S + I+ +V+ ++ + +A K K +Q LI L E Sbjct: 66 SPLFAQTPVARIDDQVVRLAELQEALAATHDERKAGAATSPDFKAVLQRLIDSRLLIMEA 125 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 + G+ + + ++ Sbjct: 126 REMGLDELPELKEQL-------------------------------AVFKDVTLRETLQQ 154 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 +E+ L + Sbjct: 155 QLTKDVKPDALEVER-----VYKESVRRWKVRSLLFRQEEDAAAVKPA----------LA 199 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 ++ ++ G+ + L L L + T P Q G Sbjct: 200 GGKGFAELAKQLIAEKKAEGTGEPEVLPPDQTLPAVAAALKPLQKGEATTPLKLQNGFAV 259 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL-RSNAII 314 + + D + A +A + + + + K+L R I Sbjct: 260 LYVEDI-VYPSDPAKRAEAEKASVDRQSGQLLTAFRKELDRKYVKI 304 Score = 43.5 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 28/291 (9%), Positives = 69/291 (23%), Gaps = 32/291 (10%) Query: 31 VSYKSWAMSSRIRTTINGE-VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + R I GE IT GD++ + + E Sbjct: 319 PGFAVLVKDKRPIVRIAGEAPITVGDLANAVG--------------------EKFFHGVE 358 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 + D + Q + ++ V+ Sbjct: 359 KPQQEKRVDKLKRPRLDGLIYKRVFTKEARVRKL--DQSEEYLRAVEDQENSMVFGTFVQ 416 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + ++ A ++ L R + D K + + + Sbjct: 417 RVLVPDVSLKDEDLRAYYDGHRDEFTSAPLYRLEQVAFADMKGAQRAAERLARGTDFKWL 476 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV-E 268 + + A G+ L L L +Q + +G Sbjct: 477 KANAEGQLPPAQRALDFE----GQL--LSAKGLPEDLAGALGSAQVGDYRLHQGPRGQGY 530 Query: 269 YIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + + + + + + + + + ++ KLR+ I + Sbjct: 531 VVLVVSRTEPQVQPYAEARPDIQKKLFGQALNRAVTDWAAKLRAAHEIETF 581 >gi|94497171|ref|ZP_01303743.1| hypothetical protein SKA58_13253 [Sphingomonas sp. SKA58] gi|94423276|gb|EAT08305.1| hypothetical protein SKA58_13253 [Sphingomonas sp. SKA58] Length = 650 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 31/399 (7%), Positives = 81/399 (20%), Gaps = 96/399 (24%) Query: 9 LSDFIKLLTTYF-VLIIFCIVPIVSYK-------------SWAMSSRIRTTINGEVITDG 54 LS F +++ + F + F + +++ + G +T Sbjct: 2 LSVFRRIIHSKFGAIFAFLFLGVIAAAFILGDVTSGQFGGASLSGGGTAAKAKGYKLTVA 61 Query: 55 DISKRIALLKLQKINGELE------------KIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++ R+ + E +L+ + + GI V Sbjct: 62 ELQDRVQRVFENARRSSPELQIGEFFAQGGGAQVFDQLVQSLTLRAYADDQGIHISKRLV 121 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND----------- 151 + Q + + + +Q L + + Sbjct: 122 DAQIAQIPAFQDAAGNFSNDNFRALLARERLSEQALRDDISREILQRQLLAPIGIGARPS 181 Query: 152 --------------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRT--- 182 F+ + ++ +K + R Sbjct: 182 ENLVLPYASLLLEARQGQVAAIPAVAFLDDKDPTDAQLADFYKKNSDRFTIPEQRRIRYA 241 Query: 183 ----------------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK- 225 + + + N + R + + A K Sbjct: 242 VVDAERFAQASMPSDAEISAYYNQNKANYAASENRSVEQLVLPTEAGAKAIAAQVKAGKS 301 Query: 226 -IHDVSIGKA----------QYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274 L + + Q P G + + Sbjct: 302 LPQAAQGAGLSVSTLDAQSRGQLTSATSKAVADAVFAARQGELIGPVRGPLGWLLLRVTA 361 Query: 275 K--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + A++ + K ++ ++ KL Sbjct: 362 VQDKPARPLAAVRDEIVKTLRVQKEKQLLGDFTAKLEDQ 400 >gi|261749602|ref|YP_003257288.1| peptidylprolyl cis-trans isomerase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497695|gb|ACX84145.1| peptidylprolyl cis-trans isomerase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 710 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 32/261 (12%), Positives = 64/261 (24%), Gaps = 4/261 (1%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 I +I I K L ++ + + E ++ Sbjct: 221 IGKNEIENFIKKHKFLYKRENLRSLSFAICRSKPSLEDEKNMKNKMEKLFHKFKSTNKNY 280 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 +E Q +Q+ + + +I K Sbjct: 281 MFVLTKSEKPFDSNFYLKNHLPPILQNFVVQNNKIGSMFGPIKEDNTYVMAKIIGKKMIS 340 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--HD 228 ++ LI NK + + K + + K + K + + Sbjct: 341 DSVLSSHILISHKEAIRSSNKRTKKEAEEIANKVYKILQKDPSKFEELVRKKSDDLINAK 400 Query: 229 VSIGKAQYLLESDLHPQ--FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286 + G +L ++ + F +++ TQ G I I DK Sbjct: 401 KNQGSLGWLKYNEQNSIGKFNIFDSENKKRMIGLTETQFGYHIIRIDDKSVPKPAYQFAV 460 Query: 287 YLSAQNTPTKIEKHEAEYVKK 307 + K E V+K Sbjct: 461 IVKTLIPSKKTEDRLYSRVRK 481 >gi|163743877|ref|ZP_02151248.1| PPIC-type PPIASE domain protein [Phaeobacter gallaeciensis 2.10] gi|161382818|gb|EDQ07216.1| PPIC-type PPIASE domain protein [Phaeobacter gallaeciensis 2.10] Length = 78 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 3/66 (4%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKIAV 77 + + + +S + ++ + T+NGE IT G + A L Q L + Sbjct: 11 LALTVALTLPISAAAEPHANTVVATVNGEEITIGHMIIARATLPQQYQQLPDDVLYDAIL 70 Query: 78 QELIVE 83 +LI + Sbjct: 71 DQLIQQ 76 >gi|256003621|ref|ZP_05428610.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum DSM 2360] gi|281416651|ref|ZP_06247671.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum JW20] gi|255992412|gb|EEU02505.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum DSM 2360] gi|281408053|gb|EFB38311.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum JW20] gi|316939760|gb|ADU73794.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum DSM 1313] Length = 368 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 41/359 (11%), Positives = 97/359 (27%), Gaps = 46/359 (12%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI------RTTINGEVITDG 54 M + S +K+ V I + +++ + I +NGE + Sbjct: 2 MENNAGISKKPVVKVHVILLVAGILVLSAVLAILVAYQAGLIYGDFSELARVNGEPVYVK 61 Query: 55 DISK-------------------------RIALLKLQKINGELEKIAVQELIVETLKKQE 89 + R + K A+ +++ +++ Sbjct: 62 EYKMKLLSNTTEVINYFSQSYAVETKENFRTDSYSGEAPVEMARKKALDDIVEVKVQQIL 121 Query: 90 IEKSGITFDSNTVN--YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 ++ GI ++ R + + G+ + Y + + Sbjct: 122 AKEKGIIESTDYREFLKELENENRQRKDALKSNKVVYGPDNYGEIEYFNYSFDNMV-SKL 180 Query: 148 VKNDFMLKYGNLEMEIPANKQ---KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 + + E ++ + + + I+ + D K ++ + + Sbjct: 181 KEKLKENELSIPEEKLESMYNLLKDTRFKLPDDIKIQVISIGFTDEKGIINDDLKSKARV 240 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIG-KAQYLLESDL------HPQFQNLLKKSQNNT 257 E + + E+ A + S + + E + LK Sbjct: 241 KIEEAKKRIDNGEPFEEVALDYNPKSGVLEYVFTKEKQMAKDISHPELLDEALKLKPGQV 300 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + I +C ++ G + K Q IEK EY+ KL A + Sbjct: 301 SEIIERSTDFVLI-LCKEKKSTGYLPYKD-ARKQLLDELIEKDYQEYIDKLVEQADVKI 357 >gi|327403972|ref|YP_004344810.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fluviicola taffensis DSM 16823] gi|327319480|gb|AEA43972.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fluviicola taffensis DSM 16823] Length = 737 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 23/275 (8%), Positives = 63/275 (22%), Gaps = 14/275 (5%) Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 ++ + I D ++ ++ + I + + + Sbjct: 228 VKVSDKEI--RDYYEKNKEKPKYQVMAGRDVKFFDIAIEPSKSDIDTFNLEMKKIKTAFA 285 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML----KYGNL 159 S Q +P + F + Sbjct: 286 ASTNDSLFILQNSELPRMYASGNQLTFRPEGDAKARQGMTYPVAMDTVFKTATVGQIVGP 345 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + + L + + K++ D+ + + Sbjct: 346 YDDKGKTRIAKVLGFNSTVLKARHILINAPEGDAKKVASAKKLADSLVKLVNNANFAEFV 405 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 K++ G + ++ ++ F + T TQ G + + D++ Sbjct: 406 TKYSEDQGSKEKGGVYEDFMDYEMVEPFSKFAMEKPIGTIGVVKTQFGFHIMEVMDRK-A 464 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 G + + A + P + L+ A Sbjct: 465 GSKFPVLAVVEKTMLP------SEDTKADLKDKAY 493 >gi|170743494|ref|YP_001772149.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium sp. 4-46] gi|168197768|gb|ACA19715.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium sp. 4-46] Length = 632 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 6/88 (6%), Positives = 22/88 (25%), Gaps = 7/88 (7%) Query: 233 KAQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYL 288 ++L Q + P + G + + + + + Sbjct: 315 DLGTFTRAELFDPAVADAAFALPQGTVSEPVKGRFGTVLLRVTAIEPGSIKPFEEVADQI 374 Query: 289 SAQNTPTKIE---KHEAEYVKKLRSNAI 313 + + + + ++ R+ A Sbjct: 375 RTEIARERARDGLEKVHDAIEDQRAGAK 402 >gi|149925857|ref|ZP_01914121.1| hypothetical protein LMED105_06517 [Limnobacter sp. MED105] gi|149825974|gb|EDM85182.1| hypothetical protein LMED105_06517 [Limnobacter sp. MED105] Length = 284 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 26/286 (9%), Positives = 67/286 (23%), Gaps = 56/286 (19%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + S S R +ING IT+ ++ + +G I + I Sbjct: 53 FAAGDSSGKSDREVASINGMKITEMEL-------GVMLQSGVDRAIVIDRYIN------- 98 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 E ++ + + ++ + V Sbjct: 99 --------------KVVAAERGREMYVEEAKAALRAAEREVLSTLYTTKRMEELRKAV-- 142 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + ++ A + + S +Q ++ + + Sbjct: 143 ---------SDDDVKAYYDANVLDQNFQQWKVSYYLSNDQKDVQQTLEKLRKGEKDALDQ 193 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269 L+ + A + + + K + + + G+ Sbjct: 194 LKPLVEQGDGYAVAQALPYNLG---------------RVVSKMKKGEFSEVLRLRNGLLV 238 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + I D + L L + +++ R A + Sbjct: 239 LKIEDSKQLK--KPTVEELKQDIVQALALEKFNAELEQARRQAKVE 282 >gi|255318653|ref|ZP_05359884.1| peptidyl-prolyl cis-trans isomerase C [Acinetobacter radioresistens SK82] gi|262379122|ref|ZP_06072278.1| peptidyl-prolyl cis-trans isomerase C [Acinetobacter radioresistens SH164] gi|255304335|gb|EET83521.1| peptidyl-prolyl cis-trans isomerase C [Acinetobacter radioresistens SK82] gi|262298579|gb|EEY86492.1| peptidyl-prolyl cis-trans isomerase C [Acinetobacter radioresistens SH164] Length = 94 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 21/68 (30%), Gaps = 1/68 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT-NPYVTQ 264 ++ +++++ G+ + + L P L+ P +Q Sbjct: 21 KKKLQSGADFNKLAQQYSTCNSARRGGELGEVKKGQLVPVIDKLVFSGAERVIHGPVKSQ 80 Query: 265 KGVEYIAI 272 G + I Sbjct: 81 FGFHLLEI 88 >gi|86131509|ref|ZP_01050107.1| peptidylprolyl isomerase [Dokdonia donghaensis MED134] gi|85817954|gb|EAQ39122.1| peptidylprolyl isomerase [Dokdonia donghaensis MED134] Length = 713 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/271 (8%), Positives = 64/271 (23%), Gaps = 24/271 (8%) Query: 50 VITDGDISKRIALLKLQKINGELE-----KIAVQ-ELIVETLKKQEIEKSGITFDSNTVN 103 ++ +I + + K + E K + L E K E+ K + + Sbjct: 212 PVSKDEIQEYVNDHKDEFQTEETRSIRFVKFVEEASLEDENALKAELSKLRNEYTARNGA 271 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV---------------- 147 + + E +D + + Sbjct: 272 TGVTETFAGFDKTEEIEDFLIDNSDVPFVDRWFFKKDLPSTNADTLFALGKGGVYGPYKD 331 Query: 148 -VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 + +M + + + Sbjct: 332 GRYMNLSRVVDVRKMPDSVKTSHILIDFQGAVTNTARGPIPSSATRSKEDAKKLADSLLS 391 Query: 207 ESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 + K + ++F++ + + G Y + +++ + + T T Sbjct: 392 VLKRNKNKFEDLAKEFSTDKSNSDNGGDLDYQNPNLFAAGYRDFIVDNNEGTIGIAETNF 451 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 G I I D++++ I + + K Sbjct: 452 GYHVINIVDQKNVQDVIKVATVVKEILPSDK 482 Score = 38.5 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 21/77 (27%), Gaps = 1/77 (1%) Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 + + ++P +GV I + + G A+ Q Sbjct: 631 AGNEPKVVGAAFGLKEGEVSSPIEGSRGVYVIEVVKVSEAPGLENYAAFAGQQ-AQKSRA 689 Query: 299 KHEAEYVKKLRSNAIIH 315 + + L+ A I Sbjct: 690 AVSTKVLNALKEAADIE 706 >gi|329942658|ref|ZP_08291437.1| hypothetical protein G5Q_0326 [Chlamydophila psittaci Cal10] gi|332287253|ref|YP_004422154.1| putative exported protein [Chlamydophila psittaci 6BC] gi|313847839|emb|CBY16833.1| putative exported protein [Chlamydophila psittaci RD1] gi|325507071|gb|ADZ18709.1| putative exported protein [Chlamydophila psittaci 6BC] gi|328814918|gb|EGF84907.1| hypothetical protein G5Q_0326 [Chlamydophila psittaci Cal10] gi|328914499|gb|AEB55332.1| conserved hypothetical protein [Chlamydophila psittaci 6BC] Length = 361 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 87/304 (28%), Gaps = 38/304 (12%) Query: 34 KSWAMSSRIRTTINGE-VITDGDISKRIALLKLQKINGELEKI-------------AVQE 79 A+ R+ I+ + V+T D+ +++ LL +E ++ Sbjct: 47 AGIAIHDRVLFKIDDDTVVTTLDVIQKLNLLFASSYPQLMESYPARSQYYTAMWPVVLES 106 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 +I E L + + I D TVN D S F + + + + Sbjct: 107 VIDEFLMVADAKAKKIQVDPTTVNQEVEAMFGR------DLSFFYVHFDMTPDDVFKVVH 160 Query: 140 IQSIWPDVVKNDFMLKY--GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 + V+ K +I + ++ + L + + +I Sbjct: 161 RTLVAQRVMGMMVRSKVMLKITPGKIREHYNQLAEEAAKTTLWKYRVVTIKAATESLSSQ 220 Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKI----------HDVSIGKAQYLLESDLHPQFQ 247 + +I K+ + +D + A + S ++ Sbjct: 221 IADKICARLNETQSWNKERLSALALSQGGQFVCSEEFIRNDKELSDAHKMELSSVNYPLA 280 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + + + + + ++ + E E++Y KK Sbjct: 281 MCSQPKAH------KSGHKLYVLLEKSTMPMQPLEEIETQIKQTLFMNYAESIESQYKKK 334 Query: 308 LRSN 311 LR+ Sbjct: 335 LRAR 338 >gi|83815274|ref|YP_445915.1| hypothetical protein SRU_1798 [Salinibacter ruber DSM 13855] gi|83756668|gb|ABC44781.1| hypothetical protein SRU_1798 [Salinibacter ruber DSM 13855] Length = 304 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 30/290 (10%), Positives = 72/290 (24%), Gaps = 33/290 (11%) Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87 + ++ A + +T D+ + +A + + + E K AV + + TL Sbjct: 36 AGLAGCQTEAPPDSYVARVGTHYLTGADLDRMLAGMGPVRDSTEARKQAVDQWVTRTLLY 95 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 +E E+ ++ + Q + + Y + Sbjct: 96 REAERLNLSSNDEVQQRLRRQRRAVLVSALRTRLEEEADVRPTPEKVRTYFERHKEQLRL 155 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + ++ R L + P Sbjct: 156 REPYVRVQ------------YLAAPDRPTAQTARQALRTPPAPPDTTWA----------R 193 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 D + + + + S L + L + TT Sbjct: 194 LVTEYATDTTRARRLSRRFVPQS------RLGQQVPALADRLADLQEGETTPVVQASGRY 247 Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE----YVKKLRSNAI 313 + + D+R G ++ + + + V++LR+ A Sbjct: 248 HVLRL-DRRLSEGTPPELDWVEPKIRRRLRIRARKQIHATEVQRLRNRAQ 296 >gi|300707607|ref|XP_002996004.1| hypothetical protein NCER_100963 [Nosema ceranae BRL01] gi|239605260|gb|EEQ82333.1| hypothetical protein NCER_100963 [Nosema ceranae BRL01] Length = 138 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 12/136 (8%), Positives = 38/136 (27%), Gaps = 7/136 (5%) Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 +W + + + Y + + + +++ + S N + Sbjct: 1 MWHRLKEPETNKIYFYNDETKEKTYIRPNDGFRLYHILIKHINSRNPNDRSEVEALNLIN 60 Query: 203 KDAEESRLRL------PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQN 255 K + + + K + G ++ +++++ +F+ + Sbjct: 61 KLYLDLQQNINIENFREYFKAKAMVVSECKSKSKGGDLGFVCKNEMYKEFEKAAFMLKRG 120 Query: 256 NTTNPYVTQKGVEYIA 271 P T G I Sbjct: 121 RLVGPVKTPSGFHIIY 136 >gi|327392985|dbj|BAK10407.1| peptidyl-prolyl cis-trans isomerase D PpiD [Pantoea ananatis AJ13355] Length = 309 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 26/81 (32%), Gaps = 2/81 (2%) Query: 234 AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQ 291 +L S + +N K + + + G + D + +++ ++ + Sbjct: 1 MGWLEPSTTPDELKNAGLKEKGQLSGVIKSSVGFLIARLDDIIPEQVKPLADVRSEVADE 60 Query: 292 NTPTKIEKHEAEYVKKLRSNA 312 K + +K+ A Sbjct: 61 VKQEKAVDAFYKLQQKVSEAA 81 >gi|315050532|ref|XP_003174640.1| peptidyl-prolyl cis-trans isomerase ssp1 [Arthroderma gypseum CBS 118893] gi|311339955|gb|EFQ99157.1| peptidyl-prolyl cis-trans isomerase ssp1 [Arthroderma gypseum CBS 118893] Length = 219 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 7/109 (6%), Positives = 23/109 (21%), Gaps = 1/109 (0%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + R + + ++ + + + Sbjct: 108 EGKIRASHLLIKHNESRRPSSWRESEITRSKSEAIEILRSHKQRIEAGEASLGDIATSES 167 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + ++ +F+ ++ T GV I Sbjct: 168 DCSSARKRGDLGFFGRGEMQAEFEQAAFALKVGEVSDIVETASGVHLIE 216 >gi|262195599|ref|YP_003266808.1| hypothetical protein Hoch_2377 [Haliangium ochraceum DSM 14365] gi|262078946|gb|ACY14915.1| hypothetical protein Hoch_2377 [Haliangium ochraceum DSM 14365] Length = 339 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 25/275 (9%), Positives = 70/275 (25%), Gaps = 30/275 (10%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 + T++G + + + L L + A+ + + L +E E+ G++ Sbjct: 67 VVATVDGAPVYGDCVRTQAQALGLDRAG------ALAQCVDFELLAREAERRGLSARPEV 120 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 ED + +++ V+ Sbjct: 121 QAA---GERERVRRFIEDEFERRYPDPASAPRAELLEVYEALKGQYVRPALRHTAFLRVP 177 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 ++ + L+ + ++ + +++ K+ R Sbjct: 178 VAEDSEAGGDEDRQAKALVDEIYAAVRERDDLETAELERVGKEIAGEREVEVLRAPLA-- 235 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNL--LKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + L P++ P TQ G + I + + Sbjct: 236 ---------------YPGARLVPEYLEPALSLTEPGTVAPPARTQWGWDIILLTELEPAL 280 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + + ++++ LR A + Sbjct: 281 DRSP--DEVIDELFQLWQRRAFQQWLRALREPAAV 313 >gi|324121062|gb|AAF60409.2| Hypothetical protein Y110A2AL.13 [Caenorhabditis elegans] Length = 161 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 11/91 (12%), Positives = 26/91 (28%), Gaps = 1/91 (1%) Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 I +K ++ K+ +++ K ++F+ G Sbjct: 68 WRSDHITRSKDDAINILKNYEKELKDASNIEGKFRELAKQFSDCSSAKRGGDLGPFERRQ 127 Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + F++ ++ T GV I Sbjct: 128 MQKPFEDASFALEIGEMSDIVDTSSGVHLIY 158 >gi|39935954|ref|NP_948230.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris CGA009] gi|39649808|emb|CAE28330.1| putative peptidyl-prolyl cis-trans isomerse D [Rhodopseudomonas palustris CGA009] Length = 633 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 34/394 (8%), Positives = 93/394 (23%), Gaps = 85/394 (21%) Query: 1 MTSKVFTSLSDFI-KLLTTYFVLIIFCIVPIVSYKSW--AMSSRIRTTINGEVITDGDIS 57 M + + S++I K + T + ++ + I I+ Sbjct: 1 MLRGMRKASSNWIGKTIMTIVMGVLIVSFGVWGIADVFRGFGRSTLAKIGSTEISTEQFR 60 Query: 58 KRIA-------------LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + L Q +++ +Q+ I E ++ + G+ Sbjct: 61 QTYNDRLQQIGRQFGRPLTPDQARAIGIDRQVLQQTIAEAALDEDARRLGLGQSDADTMK 120 Query: 105 FFVQHARNTGLSAEDFSSFLDK---------QGIGDNHFKQYLAIQSIWP---------- 145 ++ G + + ++ + Q + L Q Sbjct: 121 SILEDPNFKGANGQFDANRFQQLIRQFGFTEQRYLAEQRRVALRRQIAGSLTAGLEAPKT 180 Query: 146 ------------------DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + ++ A K + + Sbjct: 181 LMQALSQFQSEERAIDYLKLTDAQAGTIAAPSPADLTAFYDSHKAQFRAPEYRKISFLVV 240 Query: 188 PDNKLQNQGFV----QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG----------- 232 + V +++ + + +L P+ L+ + + G Sbjct: 241 TPESIAKWAEVSDADAQKLFEQRKDKLSTPEKRQLLQIVFPSVEEAQAGRAKIASGTSFA 300 Query: 233 -------------KAQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + +S++ N + P Q G + + Sbjct: 301 DLAKERGVKPADLDLGLVSQSEMLDQKVAAAAFALPLNEVSQPVQGQFGTVLLEVTKIE- 359 Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 G+ A ++A ++ + V++L Sbjct: 360 -TGKQPDYASVAASLKRDLAQERARKQVQELHDK 392 >gi|209549414|ref|YP_002281331.1| peptidyl-prolyl cis-trans isomerase D signal peptide protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535170|gb|ACI55105.1| peptidyl-prolyl cis-trans isomerase D signal peptide protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 630 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 29/396 (7%), Positives = 84/396 (21%), Gaps = 86/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56 M + + ++ L ++ F I + +S T+ + + + Sbjct: 1 MFHILRRAAQTWVAKLLMLLLVASFGIWGVSRSLITGSNSTTVVTVGDQHVDVNEFHLAY 60 Query: 57 SKRIALLKLQKINGELEKIA------------------VQELIVETLKKQEIEKSGITFD 98 +++A L Q + A + +L + ++ Sbjct: 61 QRQVASLGQQFGTRLTPEQARAFGVEQQVLAQLVAGASLDQLAEDMNLGLSEDRLAQLIA 120 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS---------------- 142 + + ++ + + K + Q Sbjct: 121 DDPAFKAVNGKFDRELFISRLRNANIRQDDYIKERSKVAVRSQVVDAISNGFTAPKTLID 180 Query: 143 -----------IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 I ++ N + ++ A + R +++ Sbjct: 181 ALKLYGNESRSIDYLLLTNANIEPIKAPADDVLAAWFDGVKQRYQAPEYRKLVYLSLQPA 240 Query: 192 LQNQGFVQKRIKDAEESRLR-----------LPKDCNKLEKFASKI-HDVSIG------- 232 + E + + + A + G Sbjct: 241 DIADAATVTDDQIHEAFDKSKDTYRTPESRTIEQLTFTSKDLAVAAETALKGGTSFDQLV 300 Query: 233 ----------KAQYLLESDLHPQF---QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD-- 277 + + Q TT G + I + + Sbjct: 301 SDQGKTASDVLLGEFTKDKVPDQAVADAAFAVSKDGGTTPVVEGSFGSVILRITNIKPET 360 Query: 278 LGGEIALKAYLSAQN-TPTKIEKHEA--EYVKKLRS 310 +K + Q ++ + ++ LR+ Sbjct: 361 TKNFDEVKEDIRKQLALSNASQEVINVHDRIEDLRA 396 >gi|325521604|gb|EGD00389.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp. TJI49] Length = 207 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 27/221 (12%), Positives = 63/221 (28%), Gaps = 44/221 (19%) Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I +A L + Q + +L++ QEL+ + QE + GI ++ Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIRRGIPNRAD 84 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +A Q++ + DF+ K + Sbjct: 85 VKAQV-------------------------------AVAQQTVVLRAMIEDFLKKNQPTD 113 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E+ A + + + + + + K + + Sbjct: 114 AEVKARYDDLVKGVGGNREYHLHHILVDNEQQAKDLIAKIK---------AGAKFEDLAK 164 Query: 221 KFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259 +++ + G + P+F +K + T+ Sbjct: 165 QYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTD 205 >gi|125975643|ref|YP_001039553.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum ATCC 27405] gi|125715868|gb|ABN54360.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum ATCC 27405] Length = 382 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 41/359 (11%), Positives = 97/359 (27%), Gaps = 46/359 (12%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI------RTTINGEVITDG 54 M + S +K+ V I + +++ + I +NGE + Sbjct: 16 MENNAGISKKPVVKVHVILLVAGILVLSAVLAILVAYQAGLIYGDFSELARVNGEPVYVK 75 Query: 55 DISK-------------------------RIALLKLQKINGELEKIAVQELIVETLKKQE 89 + R + K A+ +++ +++ Sbjct: 76 EYKMKLLSNTTEVINYFSQSYAVETKENFRTDSYSGEAPVEMARKKALDDIVEVKVQQIL 135 Query: 90 IEKSGITFDSNTVN--YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 ++ GI ++ R + + G+ + Y + + Sbjct: 136 AKEKGIIESTDYREFLKELENENRQRKDALKSNKVVYGPDNYGEIEYFNYSFDNMV-SKL 194 Query: 148 VKNDFMLKYGNLEMEIPANKQ---KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 + + E ++ + + + I+ + D K ++ + + Sbjct: 195 KEKLKENELSIPEEKLESMYNLLKDTRFKLPDDIKIQVISIGFTDEKGIINDDLKSKARV 254 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIG-KAQYLLESDL------HPQFQNLLKKSQNNT 257 E + + E+ A + S + + E + LK Sbjct: 255 KIEEAKKRIDNGEPFEEVALDYNPKSGVLEYVFTKEKQMAKDISHPELLDEALKLKPGQV 314 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + I +C ++ G + K Q IEK EY+ KL A + Sbjct: 315 SEIIERSTDFVLI-LCKEKKSTGYLPYKD-ARKQLLDELIEKDYQEYIDKLVEQADVKI 371 >gi|260433616|ref|ZP_05787587.1| conserved hypothetical protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417444|gb|EEX10703.1| conserved hypothetical protein [Silicibacter lacuscaerulensis ITI-1157] Length = 613 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 30/349 (8%), Positives = 75/349 (21%), Gaps = 82/349 (23%) Query: 41 RIRTTINGEVITDG----DISKRIALLKLQKING---------ELEKIAVQELIVETLKK 87 R + EVIT ++ + I ++ Q L++ A+ L+ Sbjct: 37 RTVAQVGDEVITVDAYARELQREIRAVEAQTGQPLQMSQARDLGLDQRALSRLVALAALD 96 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS---IW 144 E+ + GI+ + ++ G Q + Sbjct: 97 NEVAQLGISVGDENLQKEILRIQAFQGADGSFDREAYRFQLEQIGMTEAEFEEDLRKETA 156 Query: 145 PDVVKNDFMLKYGN-----------------------------------LEMEIPANKQK 169 +V+ M + +I A + Sbjct: 157 RTIVQGAIMNGIEMPAVLTDTLADYVQARRSFTVATLSADALDAPVPEPTDADIQAFYEA 216 Query: 170 MKNITVREYLIRTVLFSIPDNKLQN------------QGFVQKRIKDAEESRLRLPKDCN 217 + + + LQ+ +++ + E + + Sbjct: 217 NTDRFTLPRTKKITYAVLSPAMLQDTVEVDEDALRRLYDQRKEQYQQPERRLVERLVYPS 276 Query: 218 KLEKFASKIHDVSIG-----------------KAQYLLESDLHPQFQNLLKKSQNNTTNP 260 + E +K G + DL + + P Sbjct: 277 EAEATEAKAQLEVGGVDFEQLVRARELELSDVDLGDVTRDDLGEAADAVFAAEVGDVVGP 336 Query: 261 YVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + G + + L + + + ++ Sbjct: 337 LPSAFGPALFRVNGTLAEHNVTFDEAEPELREELAAERARRVIESQAEE 385 >gi|330444318|ref|YP_004377304.1| hypothetical protein G5S_0644 [Chlamydophila pecorum E58] gi|328807428|gb|AEB41601.1| conserved hypothetical protein [Chlamydophila pecorum E58] Length = 359 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 96/297 (32%), Gaps = 24/297 (8%) Query: 34 KSWAMSSRIRTTINGE-VITDGDISKRIALL-------------KLQKINGELEKIAVQE 79 A+ R+ ++ E V+T D+ +++ +L + + + ++ Sbjct: 45 TGLAIHDRVLFKVDEENVVTTLDVIQKLNILFYTSYPHLIDSYPARSQYYSAMWPVVLES 104 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 ++ E L + ++ + D TVN + + + L Sbjct: 105 ILDEFLMYADAKEKKLDVDPTTVNQEIEKILGRDLTPFYSHFDMTPEDIVKVIERT--LT 162 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 Q + +V++ MLK +++ A + + R VL + + Sbjct: 163 AQRVMGMMVRSKAMLKVTPGKIK-EAYDKLAREAEKRFVWKYRVLTIKAATESLASSIAE 221 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL---LKKSQNN 256 K E++ + L S + +L + + + Sbjct: 222 KVSTRLNETKCWDKERLLSLVLSQGGQFTCS--DEFCRNDDELSESHKQELLEVAYPEKW 279 Query: 257 TTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 P ++ G + + DK + L+A + + ++ + E +Y +KLR+ Sbjct: 280 CGLPKASKSGYKLFVLVDKSVGSVAPLEELEAQIKQRLFASEAVELEKQYKEKLRAR 336 >gi|89898508|ref|YP_515618.1| hypothetical protein CF0701 [Chlamydophila felis Fe/C-56] gi|89331880|dbj|BAE81473.1| hypothetical protein [Chlamydophila felis Fe/C-56] Length = 360 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 92/297 (30%), Gaps = 24/297 (8%) Query: 34 KSWAMSSRIRTTIN-GEVITDGDISKRIALLKLQKINGELEKI-------------AVQE 79 A+ R+ ++ V+T D+ ++ LL ++ ++ Sbjct: 46 AGIAIHDRVLFKVDEDNVVTTLDVIHKLNLLFASSYPQLVDSYPARSQYYTAMWPVVLES 105 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 +I E L + + I DS TVN A ++ + F N + L Sbjct: 106 VIDEFLMVADAKAKKIQVDSTTVNQEIE--AMFGRDLSQFYVHFEMTPEDIFNVVNRTLI 163 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 Q + +V++ MLK ++ Q ++ V+ + + Sbjct: 164 AQRVMGMMVRSKVMLKVTPGKIR-EHYNQLAEDAAKTTVWKYRVVTIKAATESLSSQIAD 222 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT-- 257 K E++ + + L S + + +L + L Sbjct: 223 KVCARLNETQSWNKERLSALALSQGGQFVCS--EEFTRNDKELSEAHKMELSTVNYPLTI 280 Query: 258 -TNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + P + G + + DK + ++ + E E++Y KLR+ Sbjct: 281 CSQPKAHKSGYKLYVLLDKSAMTMQPLEEIETQIKQTLFMNYAETIESQYKMKLRAR 337 >gi|291546534|emb|CBL19642.1| hypothetical protein CK1_15290 [Ruminococcus sp. SR1/5] Length = 419 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 31/338 (9%), Positives = 81/338 (23%), Gaps = 38/338 (11%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + S+ K T V + + ++I T+N + I G +S + + Sbjct: 1 MRNSVK---KAAVTALVCVTAAGMMAGCGNKKLDGTKIAVTVNKQEIPFGVVSLAARMQQ 57 Query: 65 LQKINGELEKIAV----QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 Q + K+ + I T + +++ T + ++E Sbjct: 58 AQA--EAMYKMYLGGGSDMSIWSTKMDDDSDETYGENAVTTSVETVEKMCLEKEHASEYD 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 D + + + + + +E+ KMK+ + + Sbjct: 116 VEITDDEQKALEEAAKNFMAANSDETIAELAVDEDMVKTFLELETYDVKMKDAIEAKADV 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 + +++ + ++ K + + Sbjct: 176 KLDEKEYQQMSFSYASAKVSGDDLSDDDIKKNKENLQKFYDKVKEDPAADFNTLGDKISE 235 Query: 241 DLHPQFQNLLKKSQNNTT-------------------------NPYVTQKGVEYIAICDK 275 D+ + + + T + + K Sbjct: 236 DMTATTGTCPTYEEGDDSAANGTTYPDEVRTALRKLDEGALNEEIIKTDSVWYVVRLDSK 295 Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 D + K T TK + + + A Sbjct: 296 NDKTATESKKE----SLTNTKKDDFYNDTTDGWKKKAD 329 >gi|291565694|dbj|BAI87966.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 254 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 21/254 (8%), Positives = 60/254 (23%), Gaps = 7/254 (2%) Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 L + + ++Q L ++ + + + N + Sbjct: 5 FLTINDNDSITLSQSLQYLQNSGKLQEFLANILRQYVIDKELQSRDDTNSNAAAIEQAVI 64 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 +F ++ + D Q + + F + N +K + R Sbjct: 65 NFRLERNLSDPQAFQTWLDE---NRLTYKSFHDQVSNGFKRETLKLAVVKENLEEYFQER 121 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + + +++ G + ++ Sbjct: 122 KPFLDSVVMSRIVVDDYEMAQSLKSKIDSGEGSFEALAREYSVTTERRVNGMMGAVSKAT 181 Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 L + ++ P+ + I + ++ E + Q ++ Sbjct: 182 LPDTLKPTIEGAKVGQIIGPFEVEGRWCLFRIEEFIEVTLET---KGIKKQLQDELFDRW 238 Query: 301 EAEYVKKLRSNAII 314 E +K L I Sbjct: 239 MNEQLKTLTVKMQI 252 >gi|32170809|gb|AAP57685.1| GelI [Sphingomonas elodea] Length = 300 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 27/295 (9%), Positives = 83/295 (28%), Gaps = 50/295 (16%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLK 86 S + ++ T++G+ IT +++ + + + E++A+Q +I + Sbjct: 19 GCGSKEGKLDKGQVVATVDGDEITVFELNAEVQAAPVPQGTDRKLAEQLALQRIIERKIL 78 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 + + + + + A + I Sbjct: 79 SKIAREQKLDKTPSFLIQQ-------------------------------RRADELILTS 107 Query: 147 VVKNDFMLKYG-NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 ++++ + ++ + + + + P ++ +K Sbjct: 108 MLRDKIAGGISQPTDADVAQYQAAHPDRFAQRKVYSIEQIVFPPPSSSDKFKEFAPLKTL 167 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 ++ +L D + + ++ L + L P+ + TQ+ Sbjct: 168 DQLAAKLTADGVQFRRAPTQ-----------LDTAALPPEIAGKIAALPAAEMFILPTQQ 216 Query: 266 GV--EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA--IIHY 316 G+ I + L G+ + + K + + A + Y Sbjct: 217 GITANVITATTIQPLTGDQ-AREVALNALRTERFSKAADAQLNERLKKARETVKY 270 >gi|171685376|ref|XP_001907629.1| hypothetical protein [Podospora anserina S mat+] gi|170942649|emb|CAP68301.1| unnamed protein product [Podospora anserina S mat+] Length = 180 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 16/177 (9%), Positives = 42/177 (23%), Gaps = 2/177 (1%) Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156 + N H ++++ + + + K Sbjct: 1 MNGNQQETGLPPHWEVRHSNSKNLPYYFNSVDRTSRWEPPAGTDPEKLKVYMATYHSAKA 60 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD- 215 + + K + ++ V+ R +++ IK E+ Sbjct: 61 PLPTGDAQSGKIRAAHLLVKHRDSRRASSWKEAEITRSKEEAMSIIKAHEQRIKSGEITL 120 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + G Y D+ +F++ + + T G+ I Sbjct: 121 GELALSESDCSSARKRGDLGYFGRGDMQKEFEDAAFALQKGEISGVVDTASGLHLIE 177 >gi|302837668|ref|XP_002950393.1| hypothetical protein VOLCADRAFT_60391 [Volvox carteri f. nagariensis] gi|300264398|gb|EFJ48594.1| hypothetical protein VOLCADRAFT_60391 [Volvox carteri f. nagariensis] Length = 175 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 24/78 (30%) Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 + ++ G+ +L PQF+ + T +G+ I + ++R Sbjct: 1 EMARQHSTCGSAKKGGELGWLSRGTFFPQFETAAFAAPVGGLARATTGRGLHVIKVLEER 60 Query: 277 DLGGEIALKAYLSAQNTP 294 + ++ Sbjct: 61 YQSAVQQISPQDLSELLS 78 >gi|226293704|gb|EEH49124.1| peptidyl-prolyl cis-trans isomerase ssp-1 [Paracoccidioides brasiliensis Pb18] Length = 190 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 9/92 (9%), Positives = 23/92 (25%), Gaps = 1/92 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + ++ + E R + + G + Sbjct: 96 RPSSWREAEITRSKEEALEILRRHEESIRSGEKTLGDIAMSESDCSSARKRGDLGFFGRG 155 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 ++ +F+ + T GV I Sbjct: 156 EMQAEFEEAAFALEPGQLSGIVETASGVHLIE 187 >gi|115461134|ref|NP_001054167.1| Os04g0663800 [Oryza sativa Japonica Group] gi|113565738|dbj|BAF16081.1| Os04g0663800 [Oryza sativa Japonica Group] Length = 72 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 8/66 (12%), Positives = 17/66 (25%), Gaps = 1/66 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 E+ K + + + G + F+ + ++ T Sbjct: 3 EKIVAGERKFEDVATEESDCNSAKRGGDLGPFERGKMQKAFEKAVLALKVGEISDVVDTD 62 Query: 265 KGVEYI 270 GV I Sbjct: 63 SGVHII 68 >gi|313205229|ref|YP_004043886.1| hypothetical protein Palpr_2772 [Paludibacter propionicigenes WB4] gi|312444545|gb|ADQ80901.1| hypothetical protein Palpr_2772 [Paludibacter propionicigenes WB4] Length = 571 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/196 (10%), Positives = 57/196 (29%), Gaps = 8/196 (4%) Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 FK+ + + + + K E E + + Sbjct: 362 IGMLNDPEFLTFKRNRQFKIYTQHYKETNVIPKVVVTEAESRKFYNQNIDKFKTFGSCEV 421 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 +++ D++ ++ ++ + +D K K + + L Sbjct: 422 LIYKFKDSQTAGNSMPPIAVRYTQKPVPQEIQDRAKSIKIPEPTPATL-----KISDKTL 476 Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEK 299 ++ + + + P G I + K D + +K+ ++A+ + Sbjct: 477 SANIKSAIIRLMPTQVSMPIQMNNGYWVIYLKSKSDLIIIPYEEVKSEIAAKLPEILSNQ 536 Query: 300 HEAEYVKKLRSNAIIH 315 + + KL+ + I Sbjct: 537 ILEQQISKLKLSYKIK 552 Score = 38.1 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 31/302 (10%), Positives = 83/302 (27%), Gaps = 43/302 (14%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 L + F++ + + ++ + S+ I +T D Sbjct: 14 SLFHSIFLISLLGFILLIESCTGYGSNDTLLQIGDYKVTVADYE---------------- 57 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + E + D++ + N + + + D Sbjct: 58 -----------YMRNENNERYKLTDADLKKKIIDEGYINAYALENKYDTIASLKTRLDYA 106 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + Y A+Q + + E ++ +K K E+++ + Sbjct: 107 IRFYAAVQ--DGYMWNKKYKQALVVSETQLREAYEKQKLEYNIEFILFPDKGLLDKYCSS 164 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 + + ++ +SR+ + ++ + L++ Sbjct: 165 HSAGLSSSDFNSIKSRIGSKSGVYSSSTYQRYPFNLPGLD------------YDKLIQCK 212 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + P T +G + + R+ LK L +K++ E K++ Sbjct: 213 KGDVWGPVQTPEGYFIYRMVESRNTFKVPYNTLKPNLQKILEHKLAQKYDNERKKEVLQK 272 Query: 312 AI 313 A Sbjct: 273 AK 274 >gi|329893793|ref|ZP_08269881.1| hypothetical protein IMCC3088_2019 [gamma proteobacterium IMCC3088] gi|328923516|gb|EGG30830.1| hypothetical protein IMCC3088_2019 [gamma proteobacterium IMCC3088] Length = 309 Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 35/331 (10%), Positives = 80/331 (24%), Gaps = 41/331 (12%) Query: 1 MTSKVFTS-LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN------GEVITD 53 M K+ S F+ L ++ +R++ ++ G +TD Sbjct: 1 MIQKLLQSRALGFLVLGAIFYAASQVVFPEPKPTIGPLAETRVQALVDEWQALMGRKMTD 60 Query: 54 GDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 ++ LL + L A++ E+ + Sbjct: 61 SELR---GLLVAELDRDILFAKALE---------LELHVIDPVIAQRLLRNVEFLGLYAE 108 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 AE S L + + + IQ ++ + +I + Sbjct: 109 QSDAEKIQSALAMRMHLGDEVVKRRLIQLAEEWLL--LHSPPKSLSDQDIRDYYSNNQAQ 166 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 P + + + ++ + + + Sbjct: 167 FWAPERYTFSHVFFPREREADMRQLAAKLGTEIQDFDQALNY---------GAPFLPGYH 217 Query: 234 AQYLLESDLHPQFQNLL-------KKSQNNTTNPYVTQKGVEYIAICDK---RDLGGEIA 283 L QF +P + G + + + R L + A Sbjct: 218 FTRQTAEQLARQFGAGFVSNFLALPPRVGEWQSPIASTFGWHLVWLQEVETGRTLSLDEA 277 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + A + + ++ LR + I Sbjct: 278 QKD-IVATLQRERRDMALSDAKAVLRQDYEI 307 >gi|325134515|gb|EGC57160.1| hypothetical protein NMBM13399_0963 [Neisseria meningitidis M13399] Length = 512 Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 83/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I+D I+ I + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 G Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-DGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ + + + ++N + + + + + Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLV--NLVQNSVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKVSEADLQKFYNANKKDYLLPKAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + N P KA + + K + Sbjct: 238 AFEERVARLPANEAKP-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|144898531|emb|CAM75395.1| peptidyl-prolyl cis-trans isomerse D [Magnetospirillum gryphiswaldense MSR-1] Length = 645 Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 23/284 (8%), Positives = 67/284 (23%), Gaps = 12/284 (4%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISK------RIALLKLQKINGELEKIAVQELIVETL 85 + + E + + R AL + E + ++ Sbjct: 127 GLSLATSDDEVIAKVAAEPSFRNQLGQFDRDLLRQALSRAGWSEQEFMRQEKDNIL--RT 184 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + E G+T + Q + ++ Sbjct: 185 QLAESLSGGLTAPQALTEPLIRWKRETRQAETVSIKASSMPQPAAPDAATLEQYYKANAN 244 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + +F L A + + + + + + + Sbjct: 245 SFMAPEFRAITALLLRTTDAGRGLTVTDEMLTEAYKAREDEFHSPERRTVSQIVLADDAS 304 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQ 264 + + K ++ A + V++ + + + DL + + Q T P + Sbjct: 305 ADKAAEMVKAGKDIKVIAKDL-GVNVIELGLVEKGDLPDELAGPVFDVGQGALTQPVKSA 363 Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 G + + A + + + + + +L Sbjct: 364 LGWHVAKVTAI--TAEKTRSLAEVREMLAADILREKSMDRITEL 405 >gi|289677225|ref|ZP_06498115.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. syringae FF5] Length = 78 Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 7/67 (10%), Positives = 19/67 (28%), Gaps = 1/67 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257 +++ + + + +S G + +F ++ + N Sbjct: 12 EEKCNELKAQIEGGADFAEIAKANSSCPSSRQGGDLGSFGPGQMVKEFDTVVFSAPVNTV 71 Query: 258 TNPYVTQ 264 P TQ Sbjct: 72 QGPVKTQ 78 >gi|152990776|ref|YP_001356498.1| hypothetical protein NIS_1031 [Nitratiruptor sp. SB155-2] gi|151422637|dbj|BAF70141.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 490 Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 52/384 (13%), Positives = 101/384 (26%), Gaps = 77/384 (20%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI- 60 K L I + T FV F Y S + + + E IT + +R Sbjct: 5 MQKHKKYLVITIWISTIAFVGAGFVGWGAYKYGSASDA---VAEVGNEKITLKEFQQRYA 61 Query: 61 ------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 L + Q L+K+ + ELI E L + G+ V Sbjct: 62 NVYNYYNKMLQGKLDQEQAKKMGLDKMVLNELIQEALLENYAHDLGLIVTDEEVAQKIAS 121 Query: 109 HA---RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK---------- 155 +N ++ L + I F+Q + + + + + K Sbjct: 122 MKVFWQNGHFEKSLYNKLLQQNRIKPKDFEQSIRKELLLNKLHQALLYSKPLQLEFDTMA 181 Query: 156 ----------------------YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 E++ +K K + T +Y + + I K+ Sbjct: 182 SALFMGDKIEYTVLTDKDIDVTVTRTELKKYYDKHKNEYKTAPKYDLSIIEMPIKHFKVS 241 Query: 194 NQG-----------------------FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 + +K++ + + + K +F Sbjct: 242 EEELKSYYKQNRLKYKDANGKILPFDKAKKQVMHDLDIKKSKKEALKKYIQFKKGKLQAQ 301 Query: 231 IGKAQYLLESDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAY 287 + P Q + + SQN+ P + + + + K Sbjct: 302 KHLIVAQNNTSFPLPLMQKIAQASQNSVLKPILVEDRYVIVKVNKKIPPLPMPFEKAVTE 361 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSN 311 + K + E KK+ N Sbjct: 362 VKKDLLQQKRYQLLLEKAKKMVKN 385 >gi|86749913|ref|YP_486409.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris HaA2] gi|86572941|gb|ABD07498.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris HaA2] Length = 633 Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 19/167 (11%), Positives = 48/167 (28%), Gaps = 18/167 (10%) Query: 1 MTSKVFTSLSDF----IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI 56 M + + S++ I ++ +++ F + I S TI G IT Sbjct: 1 MLRGIRNASSNWVGKTIMMIVMGVLILSFAVWGIADIFRGFGRST-LATIGGTEITTEQF 59 Query: 57 SKRIA-------------LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + L Q +++ +Q++I E ++ + G+ Sbjct: 60 RQTYNDRLQQIGRQFGRPLTPDQARAFGIDRQVLQQVIAEAALDEDARRLGLGQSDEETM 119 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 + G+ + + +Q + + + Sbjct: 120 KSILNDPNFKGVGGAFDPNRFQQVIRQFGFTEQRYIAEQRKVALRRQ 166 >gi|32490901|ref|NP_871155.1| hypothetical protein WGLp152 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166107|dbj|BAC24298.1| ppiD [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 628 Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 21/204 (10%), Positives = 52/204 (25%), Gaps = 10/204 (4%) Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 N ++ + K + I + ++ K E+ K Sbjct: 202 NINSVSDSEAEAEYKLNSHKYVTPKKFNINYLKININDIKNKDKIIAKSKEVQEWYLKNI 261 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 R + ++ I + + K V+ Sbjct: 262 KKFTLPEKKRYSIIQFDSE--------KEAIFYLNKIKNEKDFFEIAKNKSKDIFSSVNN 313 Query: 232 GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLS 289 G ++ E + + + K++N + + G I + + + + Sbjct: 314 GDIGWIQEDFIIEEIKIANLKNKNEISKIIKSSSGYLIIMLTEIIPKVEQDLKYFYKEIE 373 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAI 313 K K Y++K++ A Sbjct: 374 NYIKEEKSIKIFNNYIEKIKILAK 397 >gi|316933952|ref|YP_004108934.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris DX-1] gi|315601666|gb|ADU44201.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris DX-1] Length = 633 Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 29/259 (11%), Positives = 66/259 (25%), Gaps = 17/259 (6%) Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 L Q+ +IA K ++ + + G Sbjct: 151 EQRYLAEQRRVALRRQIAGTITAGLEPPKTLLQALSQFQNEERAIDYLKLTDAQAGTIEA 210 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + L + + I VV + + K+ + + + Sbjct: 211 PSPADLAAFYDSHKAQFRAPEYRKISFLVVTPESIGKWTEVSDADARKLFDQRKDRLSTP 270 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 R +L + N + Q K + ++ K D+ + Sbjct: 271 EKRQILQIVFPNAEEAQAARAKI--------ASGTSFADLAQERGVKSADL---DLGLVS 319 Query: 239 ESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 +S++ N + P Q G + + G+ A ++A Sbjct: 320 QSEMLDPKVAAAAFALPLNEVSQPVQGQFGTVLLEVTKIEP--GKQPDYASVAANLKREL 377 Query: 297 IEKHEAEYVKKLRSNAIIH 315 ++ + V++L I Sbjct: 378 AQERARKQVQELHDK--IE 394 >gi|323466054|gb|ADX69741.1| Foldase protein prsA 1 [Lactobacillus helveticus H10] Length = 306 Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 25/287 (8%), Positives = 68/287 (23%), Gaps = 33/287 (11%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91 + S + ++ + G IT + + K A+ +I+ +Q+ Sbjct: 28 AACSNSGNNATVASYKGGKITQQQYYDEMK-------KSQAGKSALANMIINRALEQQYG 80 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 K + + + + + S + + + Sbjct: 81 KYVSSKKVD----------KQYNNYKKQYGSQFSAVLQQNGMTASTFKQNLKTNLLSEAA 130 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + + + + + Q + + +S + Sbjct: 131 LKHIKKISKKQEQQAWKNYQPKVT------VQHILVAKKSTAESIIKQLKDGKSFKSLAK 184 Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEY 269 + A K+ + L F+ K T P +Q G Sbjct: 185 KYSLDTATKNKAGKLPAFDSTD------NTLDSAFKTAAFKLKTGEVTESPAKSQSGYHV 238 Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314 I + G K + + + + + + + A + Sbjct: 239 IKMISHPAKGKFADHKKAIDDEIYASMAQDQAVMKDVIATVLKKADV 285 >gi|262369234|ref|ZP_06062562.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter johnsonii SH046] gi|262315302|gb|EEY96341.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter johnsonii SH046] Length = 94 Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 22/68 (32%), Gaps = 1/68 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT-TNPYVTQ 264 ++ +++++ G+ + + L P L+ + P +Q Sbjct: 21 KKKIHDGADFAKIAKQYSTCNSAKRGGELGEVKKGQLVPAIDKLVFSAAEKVLHGPIKSQ 80 Query: 265 KGVEYIAI 272 G + I Sbjct: 81 FGFHLLEI 88 >gi|254295064|ref|YP_003061087.1| hypothetical protein Hbal_2717 [Hirschia baltica ATCC 49814] gi|254043595|gb|ACT60390.1| hypothetical protein Hbal_2717 [Hirschia baltica ATCC 49814] Length = 263 Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 22/252 (8%), Positives = 61/252 (24%), Gaps = 26/252 (10%) Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126 +L L+ + + E+ Sbjct: 34 NEPIKLTSQVRDRLVENFEMLEGSKAQTADI-----------QKIENDFITEELLFKEAL 82 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + + EM + T + Y +R V F Sbjct: 83 DQGIHLTDSTTRSSLLQKIRYKISGVPATPTPEEMLEFYTEHLDYYTTEKFYSVRQVFFE 142 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + ++++ + E + + A + + +D+ F Sbjct: 143 DKPDDIEDKLVKLNAGESVEADTYWIGDYFPEYGLSA----------LRSIFGNDISASF 192 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEY 304 + P+ TQ+G + + ++ + ++ + TK + Y Sbjct: 193 DGF---TDGVWEGPFQTQRGWHLLRVEERFEPKILPFSEVQQQIERDYQHTKNAETLDTY 249 Query: 305 VKKLRSNAIIHY 316 +++L+ + Sbjct: 250 IQQLKEKYDVEI 261 >gi|125973074|ref|YP_001036984.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum ATCC 27405] gi|256004577|ref|ZP_05429555.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum DSM 2360] gi|281417269|ref|ZP_06248289.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum JW20] gi|125713299|gb|ABN51791.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum ATCC 27405] gi|255991449|gb|EEU01553.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum DSM 2360] gi|281408671|gb|EFB38929.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum JW20] gi|316940705|gb|ADU74739.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum DSM 1313] Length = 413 Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 26/268 (9%), Positives = 68/268 (25%), Gaps = 9/268 (3%) Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 I + I + Q + ++ + E E + + ++ T Sbjct: 139 IEEMIRNMAEQMKLSSPSEAESRDFLKEARDFINSELKAMRITMDEYIRDTAEYMIVTDF 198 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + + ++ + L IQ P+ + + + Sbjct: 199 MEDLTKDIVVTDEEIKKYYDEQLKIQQENPEEAAYAEVQLIQPASSRVKHILIALPEEEQ 258 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR---LPKDCNKLEKFASKIHD---- 228 +EY + + + ++ AEE + ++++ Sbjct: 259 QEYQNLKSEGKDEEAEAYLKEKLEAIKPKAEEVLNKAKNGEDFEALIKEYGEDPGMESEQ 318 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKA 286 G + L ++ G I + +K + K+ Sbjct: 319 YKDGYTVTKNSGFIKSFEDASLALGVGEISDLVEGPYGYHIIKVYEKTEAKPYTQEEKKS 378 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + K E +K+ S + I Sbjct: 379 EIESLLKSQKKTNFMNEKMKEWESASTI 406 >gi|269958860|ref|YP_003328649.1| putative peptidyl-prolyl cis-trans isomerase [Anaplasma centrale str. Israel] gi|269848691|gb|ACZ49335.1| putative peptidyl-prolyl cis-trans isomerase [Anaplasma centrale str. Israel] Length = 632 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 27/383 (7%), Positives = 91/383 (23%), Gaps = 85/383 (22%) Query: 10 SDFI-KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI----SKRIALLK 64 + F+ +L +F V S R + ++ + +A ++ Sbjct: 5 NVFVGAVLAAVLCAFVFVTFGSVLPFGDTASDRCVAKVGSNCLSLREYSTAYQGELAYIE 64 Query: 65 LQKING---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 ++++ + +I + + ++ + G+ S ++ Sbjct: 65 SLVHQKLSEDDIRRFGVKEMTLNRMIDDMVLEKFARELGLRVSSKSIRDLIGDMPMFQDK 124 Query: 116 SAEDFS--------------------------------SFLDKQGIGDNHFKQYLAIQSI 143 S + + G + + A + Sbjct: 125 SGKLDERRFKDLLSDAGMTEASYIGKVRGSLPAFMLSECIFPRSGAVYSQYYDGFAQDVL 184 Query: 144 WPDVVKNDFM----------LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + ++ A + + ++ Sbjct: 185 RGIMQSRIVDVVEISPSAVENTPTPTDNDLEAMYSEGTRNGELVMPEYRSAKYMIVSEDD 244 Query: 194 NQGFVQKRIKDAEESRLRLPKD---------CNKLEKFASKIHDVSIGK----------- 233 V + E + + + + GK Sbjct: 245 ALEEVTASDDEVESEIKNSELHDQRDVLNLVFSSESEADAASQALKGGKTFEAVVKDAGT 304 Query: 234 ------AQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI--AL 284 + + + L + ++ + + + + + G + I ++ + E L Sbjct: 305 TVEAITLKNVTKELLPVEVRSAVFGLNDGEVSGVFRSVVGWHIMKILNRHPISKEDLKKL 364 Query: 285 KAYLSAQNTPTKIEKHEAEYVKK 307 K ++A K + + ++K Sbjct: 365 KERVAASIKRQKARELFSAGIRK 387 >gi|225678868|gb|EEH17152.1| peptidyl-prolyl cis-trans isomerase pin1 [Paracoccidioides brasiliensis Pb03] Length = 140 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 9/92 (9%), Positives = 23/92 (25%), Gaps = 1/92 (1%) Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 R + + + ++ + E R + + G + Sbjct: 46 RPSSWREAEITRSKEEALEILRRHEESIRSGEKTLGDIAMSESDCSSARKRGDLGFFGRG 105 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 ++ +F+ + T GV I Sbjct: 106 EMQAEFEEAAFALEPGQLSGIVETASGVHLIE 137 >gi|240080666|ref|ZP_04725209.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae FA19] gi|268596788|ref|ZP_06130955.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268550576|gb|EEZ45595.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] Length = 512 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 30/309 (9%), Positives = 81/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I++ I+ + + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISEHSINNAMQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-DGGSPWRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQMIVDDPNFHDANGKFSHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + + + + ++N + + + + + Sbjct: 120 SQYLSQRHMSEDQFVEEIRDQFALQNLV--SLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKASEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + + P KA + + K + Sbjct: 238 AFEERVARLPAHEAKP-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|312867264|ref|ZP_07727474.1| putative peptidylprolyl isomerase PrsA1 [Streptococcus parasanguinis F0405] gi|311097393|gb|EFQ55627.1| putative peptidylprolyl isomerase PrsA1 [Streptococcus parasanguinis F0405] Length = 314 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 29/310 (9%), Positives = 87/310 (28%), Gaps = 36/310 (11%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + V ++ +V+ + A ++ T+ G+ I+ D I + + Sbjct: 1 MKKKLVAGAVTLLSVVTLAACANGTNKDVVTMKGDAISVSDFYDEIK-------TNQGAQ 53 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + ++ + + ++E + + A+ + F ++L +QG+ + Sbjct: 54 QVLFQMTINKVFEKEYGSKVSDKEVDKEL------AKQKKQLGKQFDAYLAQQGLTEETA 107 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 K+ + + V + + + ++ ++K + Sbjct: 108 KKQIRSNMLLEYAVNQAAKKDIKESDYKAAFESY-------TPEVTAQIIKLNSEDKAKE 160 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 K + + ++ S + K + Sbjct: 161 VLEAAKAEGADFAQIAKDNSTDTATKDKGGEVKFDSG------TAGIPSQVKEAAFKLDE 214 Query: 255 NNTTNPYVTQKG------VEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEK--HEAEYV 305 N ++ G + + K + G + + L + + + + Sbjct: 215 NGISDVITVSAGQNYSASYYIVKLNKKTEKGSDWKKYEKRLKEIIVDGRKQDTNYIRSII 274 Query: 306 KKLRSNAIIH 315 K +NA I Sbjct: 275 AKAMTNANIK 284 >gi|221215713|ref|ZP_03588674.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans CGD1] gi|221164415|gb|EED96900.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans CGD1] Length = 134 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 33/120 (27%), Gaps = 13/120 (10%) Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYL---------LESDLHPQFQNLLKKSQNNTTN 259 + +++ S G+ ++ L L+K Sbjct: 14 LKAGKSFESLARQYSIAPSRDSGGELPWVSFKTPATEGKTGGLPVAVAQALEKLPVGAVT 73 Query: 260 P--YVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + KR + +A + Q +EK A++V L NA I Sbjct: 74 VDSIPADALRVIVKLDAKRTTQVPSFNQAQATIRRQLETLALEKASAQFVGTLLKNATIQ 133 >gi|312890294|ref|ZP_07749831.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mucilaginibacter paludis DSM 18603] gi|311297064|gb|EFQ74196.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mucilaginibacter paludis DSM 18603] Length = 704 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 28/106 (26%) Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 + R +L SI + + + K V G Sbjct: 346 SPDSVKARHILISIQAEGSPEKAVAKADSLKKLIQSGKKTFAELAPLNSIDKGSAVKGGD 405 Query: 234 AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + P F++ + + +Q GV I I D++ Sbjct: 406 LGTFARGSMIPVFEDAVFNGKKGDIKIVTSQYGVHLIEILDQKGSS 451 >gi|85708717|ref|ZP_01039783.1| peptidyl-prolyl isomerase [Erythrobacter sp. NAP1] gi|85690251|gb|EAQ30254.1| peptidyl-prolyl isomerase [Erythrobacter sp. NAP1] Length = 645 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 42/158 (26%), Gaps = 12/158 (7%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----ISKRIALLK 64 L FI L + + + + GE IT + ++ + + Sbjct: 15 LPIFIGFLVLVALAFAASDISGSATFGGLTGDDKVAVVGGEPITSNEMSGAMNNALDRAR 74 Query: 65 LQKINGELEKIA--------VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 Q + ++ ++ LI Q ++ G+ N VN +Q ++ Sbjct: 75 DQNPTITMPQLVANDGLNRELELLIDRFAIGQFAQEYGLRAGENLVNSEILQIGAFRNVT 134 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 E + L + + Sbjct: 135 GEFDQATYQAALRRQGITDAILRKDIADGLLAQQLLRP 172 >gi|194098675|ref|YP_002001737.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae NCCP11945] gi|240016542|ref|ZP_04723082.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae FA6140] gi|240112969|ref|ZP_04727459.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae MS11] gi|240118019|ref|ZP_04732081.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID1] gi|240123573|ref|ZP_04736529.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID332] gi|240125755|ref|ZP_04738641.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae SK-92-679] gi|240128277|ref|ZP_04740938.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae SK-93-1035] gi|260440465|ref|ZP_05794281.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae DGI2] gi|268599050|ref|ZP_06133217.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae MS11] gi|268603732|ref|ZP_06137899.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID1] gi|268682203|ref|ZP_06149065.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID332] gi|268684354|ref|ZP_06151216.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae SK-92-679] gi|268686675|ref|ZP_06153537.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae SK-93-1035] gi|291043765|ref|ZP_06569481.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|193933965|gb|ACF29789.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae NCCP11945] gi|268583181|gb|EEZ47857.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae MS11] gi|268587863|gb|EEZ52539.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID1] gi|268622487|gb|EEZ54887.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID332] gi|268624638|gb|EEZ57038.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae SK-92-679] gi|268626959|gb|EEZ59359.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae SK-93-1035] gi|291012228|gb|EFE04217.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 512 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 30/309 (9%), Positives = 81/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I++ I+ + + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISEHSINNAMQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-DGGSPWRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQMIVDDPNFHDANGKFSHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + + + + ++N + + + + + Sbjct: 120 SQYLSQRHMSEDQFVEEIRDQFALQNLV--SLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKASEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + + P KA + + K + Sbjct: 238 AFEERVARLPAHEAKP-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|59801181|ref|YP_207893.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae FA 1090] gi|240115723|ref|ZP_04729785.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID18] gi|268601403|ref|ZP_06135570.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID18] gi|59718076|gb|AAW89481.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae FA 1090] gi|268585534|gb|EEZ50210.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID18] Length = 512 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 30/309 (9%), Positives = 81/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I++ I+ + + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISEHSINNAMQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-DGGSPWRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQMIVDDPNFHDANGKFSHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + + + + ++N + + + + + Sbjct: 120 SQYLSQRHMSEDQFVEEIRDQFALQNLV--SLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKASEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + + P KA + + K + Sbjct: 238 AFEERVARLPAHEAKP-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|293399048|ref|ZP_06643213.1| peptidyl-prolyl cis-trans isomerase D [Neisseria gonorrhoeae F62] gi|291610462|gb|EFF39572.1| peptidyl-prolyl cis-trans isomerase D [Neisseria gonorrhoeae F62] Length = 512 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 29/309 (9%), Positives = 80/309 (25%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I++ I+ + + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISEHSINNAMQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 Q L+ KQ + GI+ S + + + + L Sbjct: 61 A-DGGSPWRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQMIADDPNFHDANGKFSHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + + + + ++N + + + + + Sbjct: 120 SQYLSQRHMSEDQFVEEIRDQFALQNLV--SLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKASEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + + P KA + + K + Sbjct: 238 AFEERVARLPAHEAKP-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|302406618|ref|XP_003001145.1| peptidyl-prolyl cis-trans isomerase PIN4 [Verticillium albo-atrum VaMs.102] gi|261360403|gb|EEY22831.1| peptidyl-prolyl cis-trans isomerase PIN4 [Verticillium albo-atrum VaMs.102] Length = 131 Score = 46.6 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 6/77 (7%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN- 259 + ++A K + +F+ G + L P F+ + + ++T Sbjct: 44 KKEEALAKIRDGAKFDDVAREFSED-KARQGGSLGWKSRGSLDPAFEEVAFGLEASSTGS 102 Query: 260 P----YVTQKGVEYIAI 272 P T G I + Sbjct: 103 PKWGEAKTGFGYHIIMV 119 >gi|171910549|ref|ZP_02926019.1| hypothetical protein VspiD_05235 [Verrucomicrobium spinosum DSM 4136] Length = 297 Score = 46.6 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 25/242 (10%), Positives = 53/242 (21%), Gaps = 14/242 (5%) Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 LI K G T E+ D Sbjct: 41 LITVNAATVTRLKEGWTRQFQRAPDADDMRGMVEAHIREEVLCREALAIGLDRDDTIVRR 100 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK-----LQN 194 + + + D E I A +K + K N Sbjct: 101 RLAQKMEFLTQDIATSAPPDEASINAFFKKNAGRYAPPARVSFRHVYFSREKRGEKLDAN 160 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 ++D S + +++++ G + L ++ Sbjct: 161 AKEALAALQDGNASDEDFGDAFLQPFEYSNQSEADIAGIFGREFAAALMKSPESTWL--- 217 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 P + GV + I ++ + + E +++++ N Sbjct: 218 ----GPVASTYGVHLVRITGSHASPPTELGKVREQVLRDLVDERRRTANEEVLQQMKKNY 273 Query: 313 II 314 I Sbjct: 274 EI 275 >gi|239998983|ref|ZP_04718907.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae 35/02] gi|268594831|ref|ZP_06128998.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268548220|gb|EEZ43638.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|317164277|gb|ADV07818.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae TCDC-NG08107] Length = 512 Score = 46.6 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 30/309 (9%), Positives = 81/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I++ I+ + + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISEHSINNAMQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-DGGSPWRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQMIVDDPNFHDANGKFSHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + + + + ++N + + + + + Sbjct: 120 SQYLSQRHMSEDQFVEEIRDQFALQNLV--SLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKASEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + + P KA + + K + Sbjct: 238 AFEERVARLPAHEAKP-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|329765286|ref|ZP_08256866.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138192|gb|EGG42448.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 92 Score = 46.6 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 20/77 (25%), Gaps = 2/77 (2%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 Q E + K ++ + G Y + + F+ K Sbjct: 13 EKQSEAIAICERIKKGEKFGKLAKELSIDTGSAKKDGSLGYFTKGMMVKPFEEAAFKLQI 72 Query: 255 NNTTNPYVTQKGVEYIA 271 + P ++ G I Sbjct: 73 GEMSEPVKSEFGYHIIK 89 >gi|240014107|ref|ZP_04721020.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae DGI18] gi|240121669|ref|ZP_04734631.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID24-1] gi|254493775|ref|ZP_05106946.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae 1291] gi|226512815|gb|EEH62160.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae 1291] Length = 512 Score = 46.6 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 30/309 (9%), Positives = 81/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I++ I+ + + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISEHSINNAMQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-DGGSPWRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQMIVDDPNFHDANGKFSHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + + + + ++N + + + + + Sbjct: 120 SQYLSQRHMSEDQFVEEIRDQFALQNLV--SLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKASEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + + P KA + + K + Sbjct: 238 AFEERVARLPAHEAKP-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|325130315|gb|EGC53082.1| hypothetical protein NMBOX9930304_0938 [Neisseria meningitidis OX99.30304] Length = 512 Score = 46.6 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 32/309 (10%), Positives = 82/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I+D I+ + + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAMQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-DGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ + + + ++N + + + + + Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLV--NLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKVSEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + N P KA + + K + Sbjct: 238 AFEERVARLPTNEAKP-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|193214031|ref|YP_001995230.1| hypothetical protein Ctha_0312 [Chloroherpeton thalassium ATCC 35110] gi|193087508|gb|ACF12783.1| hypothetical protein Ctha_0312 [Chloroherpeton thalassium ATCC 35110] Length = 287 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 27/298 (9%), Positives = 79/298 (26%), Gaps = 28/298 (9%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 VL + + +VS + + + +T ++ I A+ Sbjct: 12 VLFLCVLFGMVSACESNSADSVVAKVGESNLTLSELQASIQYA---SPKDSATAAAI--Y 66 Query: 81 IVETLKKQEIEKSGITFDSNTVN-YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 I + + + + + + + F K+ F+ Sbjct: 67 IEDWKHTAALYDLACQANIESDPLAQVLLEKAKRRIFVQRFVDIEMKKAEAKGAFRVDSI 126 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 S + ++ K +F+ + +++ + + + + L + + + + Sbjct: 127 EVSAYYEMHKQEFVYREPAVKL-----IRLYASSSDSATRMARALGNRRFSFDELVSEAK 181 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 + + +D + + + + + Q L K +N + Sbjct: 182 IIAPELDTLNTHALQDSEEFVRISRLHLESDV-------------LQQLLEKMRPSNISP 228 Query: 260 PYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 + + + R A + + K E K+ R A Sbjct: 229 IVKLNDSLFVVMRLETRVETGTEKPLEAAYDEIKQRLKLKKQNAFYIELQKRARKAAQ 286 >gi|126737880|ref|ZP_01753610.1| hypothetical protein RSK20926_19602 [Roseobacter sp. SK209-2-6] gi|126721273|gb|EBA17977.1| hypothetical protein RSK20926_19602 [Roseobacter sp. SK209-2-6] Length = 613 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 31/405 (7%), Positives = 92/405 (22%), Gaps = 98/405 (24%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 LS + +++ V++ S + E ++ + + + + Sbjct: 5 MKQLSKTFVWILMGMLIVGLAGFGAVNFSGSVSS---VALVGDEEVSVEEYFRELQREQR 61 Query: 66 QKINGE-------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 L++ + LI E+ GI+ + Q Sbjct: 62 SLQQQTGQVVTLAQMTAFGLDRAVLGRLISLAALDNEVNSLGISIGDENLLDELTQIPSF 121 Query: 113 TG----LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML-------------- 154 G E + L + + F+ L ++ V Sbjct: 122 QGPSGNFDREAYRFALQNANLTEAEFEADLRKEAARTLVQGAIISNAEMPSTLADTLTKY 181 Query: 155 --------------------KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK--- 191 + + E+ + + + + + Sbjct: 182 IGARRSFSYVLLEPAQFSLIQIVPDDAELKSFYEANPEAFRLPETKQITYARLSPDMILD 241 Query: 192 ---------LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG---------- 232 + + + E + ++ + + Sbjct: 242 GIEVDAEALKALYEERKDQYQVPERRLVERLVFSDQAAADRATADLQAGTVTFEELVGNR 301 Query: 233 -------KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIA 283 + + DL + + + + ++P + G I + D A Sbjct: 302 GLDLQDIDMGDVTKEDLGAAAEGVFAAAVGSVSSPLPSDLGPAIFRINGQLDARITSFEA 361 Query: 284 LKAYLSAQNTPTKIEKHEAEY-------------VKKLRSNAIIH 315 +A L + + + + +++L+ A + Sbjct: 362 AEAELRQELAADRARRVIEQQAESIDDILAGGATLEELKDEADME 406 >gi|121634931|ref|YP_975176.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis FAM18] gi|120866637|emb|CAM10388.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis FAM18] gi|325132578|gb|EGC55271.1| hypothetical protein NMBM6190_0987 [Neisseria meningitidis M6190] gi|325138351|gb|EGC60920.1| hypothetical protein NMBES14902_1084 [Neisseria meningitidis ES14902] gi|325142491|gb|EGC64895.1| hypothetical protein NMB9615945_0995 [Neisseria meningitidis 961-5945] gi|325198371|gb|ADY93827.1| conserved hypothetical protein [Neisseria meningitidis G2136] Length = 512 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 32/309 (10%), Positives = 82/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I+D I+ + + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAMQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-DGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ + + + ++N + + + + + Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLV--NLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKVSEADLQKFYNANKKDYLLPKAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + N P KA + + K + Sbjct: 238 AFEERVARLPANEAKP-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|304322121|ref|YP_003855764.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Parvularcula bermudensis HTCC2503] gi|303301023|gb|ADM10622.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Parvularcula bermudensis HTCC2503] Length = 326 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 21/174 (12%), Positives = 51/174 (29%), Gaps = 13/174 (7%) Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + + + ++ ++ R ++R +L + + V Sbjct: 138 RRRILSSAYLDQAIKREVSETHLKAAYAAEQRAAAADRRVVMRRLLV----SSEKEALSV 193 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257 +RI+ + E +S G S L + + Sbjct: 194 ARRIQTGIPFGDMARRVSLDFETRSSA------GLLPPTRVSQLPTPIGETVAALPLGTV 247 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + P T++G + + + ++ I L + K A+ V K R+ Sbjct: 248 SAPVATEEGWYLLIVESRNEVK--IPPYEELRPRLMAELQRKTLAQTVAKARNR 299 >gi|17537729|ref|NP_494393.1| hypothetical protein Y110A2AL.13 [Caenorhabditis elegans] Length = 168 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 24/98 (24%), Gaps = 6/98 (6%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR-----LPKDCNKLEKFASKIHDVSIGKA 234 R+ + + N E L+ K ++F+ G Sbjct: 68 WRSDHITRSKDDAINILKSADLRNFHYEKELKDASNIEGKFRELAKQFSDCSSAKRGGDL 127 Query: 235 QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 + F++ ++ T GV I Sbjct: 128 GPFERRQMQKPFEDASFALEIGEMSDIVDTSSGVHLIY 165 >gi|15677110|ref|NP_274262.1| peptidyl-prolyl cis-trans isomerase-related protein [Neisseria meningitidis MC58] gi|7226478|gb|AAF41619.1| peptidyl-prolyl cis-trans isomerase-related protein [Neisseria meningitidis MC58] gi|316985097|gb|EFV64050.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis H44/76] gi|325140532|gb|EGC63053.1| hypothetical protein NMBCU385_0927 [Neisseria meningitidis CU385] gi|325200131|gb|ADY95586.1| conserved hypothetical protein [Neisseria meningitidis H44/76] Length = 512 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 83/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I+D I+ I + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 G Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-DGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ + + + ++N + + + + + Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLV--NLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKVSEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + N P KA + + K + Sbjct: 238 AFEERVARLPANEAKP-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|261392500|emb|CAX50051.1| putative peptidyl-prolyl cis-trans isomerase D (PPIase D; rotamase D) [Neisseria meningitidis 8013] Length = 512 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 32/309 (10%), Positives = 82/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I+D I+ + + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAMQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-GGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ + + + ++N + + + + + Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLV--NLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKVSEADLQKFYNANKKDYLLPKAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + N P KA + + K + Sbjct: 238 AFEERVARLPANEAKP-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|307942204|ref|ZP_07657555.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseibium sp. TrichSKD4] gi|307774490|gb|EFO33700.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseibium sp. TrichSKD4] Length = 635 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 16/221 (7%), Positives = 51/221 (23%), Gaps = 14/221 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI--------T 52 M + ++ + ++ F + + S + + I Sbjct: 1 MLDALRKGAGTWVAKIFIALLVFSFAVWGVADVFSGFGQNT-VAKVGETEIATVAFDRAY 59 Query: 53 DGDISKRIALLKLQKINGE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 D+++ L E + + + +I E + + + + + Sbjct: 60 RQDLNRFGRQLGRPLSTTEGAQFGIPQQTLGRMIAEAALNETGRELNLGISDDHLAGIIQ 119 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + L + + IQ + G++ + Sbjct: 120 NDPNFRRAGGGYDRALLAQVLRNIGMSEDEYVIQQREFAERQQIAQAVSGDMPAPTAYLE 179 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + VL + ++++ E Sbjct: 180 VLNAYENETRDISLIVLTAEQVGEIEDPDQAALEAYFEENK 220 >gi|163760078|ref|ZP_02167161.1| peptidyl-prolyl cis-trans isomerse D [Hoeflea phototrophica DFL-43] gi|162282477|gb|EDQ32765.1| peptidyl-prolyl cis-trans isomerse D [Hoeflea phototrophica DFL-43] Length = 651 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 16/174 (9%), Positives = 46/174 (26%), Gaps = 14/174 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56 M + ++ ++ F + I A S + T+ ++ + Sbjct: 23 MLDTLRKGAKSWVAQFLLVLLVASFAVWGISGSILNAGGSAVV-TVGDTEVSPNEFRLAY 81 Query: 57 SKRIALLKLQKINGELEKIAV---------QELIVETLKKQEIEKSGITFDSNTVNYFFV 107 +++A + Q ++ A +LI L ++ + + + + Sbjct: 82 DRQMAAVGQQLGTRLTQEQARAFGIENQVYSQLIAGALLDEQAREMNLGLSDSRLAALIA 141 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 Q A ++ S + ++ V + Sbjct: 142 QDAAFHDFNSRFDRSIFRRVLNSVGMSEEDYIRSRSQVAVRTQIVEAVAEGFDA 195 >gi|218768240|ref|YP_002342752.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis Z2491] gi|121052248|emb|CAM08573.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis Z2491] gi|254670088|emb|CBA04992.1| peptidyl-prolyl cis-trans isomerse D [Neisseria meningitidis alpha153] gi|325204222|gb|ADY99675.1| conserved hypothetical protein [Neisseria meningitidis M01-240355] Length = 512 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 83/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I+D I+ I + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 G Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-DGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ + + + ++N + + + + + Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLV--NLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKVSEADLQKFYNANKKDYLLPKAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + N P KA + + K + Sbjct: 238 AFEERVARLPANEAKP-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|119513160|ref|ZP_01632209.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nodularia spumigena CCY9414] gi|119462181|gb|EAW43169.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nodularia spumigena CCY9414] Length = 252 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 30/265 (11%), Positives = 69/265 (26%), Gaps = 28/265 (10%) Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 T+N + I I++ + L+ +++ ++E + + I Sbjct: 8 TVNDQPIF---INQAVKYLQASGKLAHFIGDILRQYVIEQEIQ---NRDDIQISPALTEQ 61 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + L+ +Q D F K L++ I Sbjct: 62 TIIDFRLKNQLNDPQTFQEWLQQNATDYATFYESIA-----------FSFKLEKLKVLIA 110 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 K I + +L R ++ I + + +Q ++++ Sbjct: 111 EPKISEYFIERKIFLDRVIVSRIIVDNQEIAEELQ-------TQIEEGGSFEQLAKEYSL 163 Query: 225 KIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 + G + + Q + + + P + + E Sbjct: 164 SEDRMVNGMMGPVSRGTMPDQLRAVIDIANPGKVVGPIEIEGRYGLFRVEQFLPASLEDM 223 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKL 308 L EK E ++KL Sbjct: 224 ---QLKQALQNELFEKWLVEKIQKL 245 >gi|75676027|ref|YP_318448.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter winogradskyi Nb-255] gi|74420897|gb|ABA05096.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter winogradskyi Nb-255] Length = 636 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 17/168 (10%), Positives = 47/168 (27%), Gaps = 16/168 (9%) Query: 1 MTSKVFTSLSDFI-KLLTTYFVLIIFCIVPIVSYKSW--AMSSRIRTTINGEVITDGDIS 57 M + + S+++ K L T + ++ I T+ G I+ Sbjct: 1 MLRGIRNASSNWLGKTLMTIVMGLLIVAFGIWGIADIFHGFGQSALATVGGTEISTEQFR 60 Query: 58 KRIALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + Q L++ +Q++I E ++ ++ G+ + Sbjct: 61 QIYNDRLQQIGRQFGRPLPPDQVRALGLDRQILQQVIAEAALDEDAQRKGLKVSDEEIGR 120 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 G + ++ + +Q + + + Sbjct: 121 QIKSDPNFKGANNAFDAARFAGLIRQLGYTEQRYVAEQRNMALRRQIV 168 Score = 38.5 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 20/255 (7%), Positives = 61/255 (23%), Gaps = 15/255 (5%) Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 + Q+ +I K +E + + A G Sbjct: 151 EQRYVAEQRNMALRRQIVGTMTAGVEPSKTLLEALNRFQNEQRTIDYVKLGAAQAGTIDP 210 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + L + + + V+ + + K+ + + + + + Sbjct: 211 PTADQLSGYFDAHKVQFRAPEYRKVAFVVLTPEEVAKWTAVSDDDARKIYEERKDKLSTP 270 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 R + + + Q +K + + D+ + Sbjct: 271 ERRQLRQIMFPSVTDAQAAREKI--------AGGASFDDIARERGLATSDI---DLGTIS 319 Query: 239 ESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 ++++ + + + P + GV I + R G ++ + Sbjct: 320 KAEIIDPAIANAAFSINSDEVSQPTQGRFGVALIKV--GRIEPGNQPTYESVAEKLKRDV 377 Query: 297 IEKHEAEYVKKLRSN 311 + L + Sbjct: 378 ALDRARAEINNLHNK 392 >gi|295698384|ref|YP_003603039.1| ppic-type ppiase domain protein [Candidatus Riesia pediculicola USDA] gi|291157251|gb|ADD79696.1| ppic-type ppiase domain protein [Candidatus Riesia pediculicola USDA] Length = 622 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 25/260 (9%), Positives = 72/260 (27%), Gaps = 10/260 (3%) Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 LL+ Q L + + + + + + + + F+ R Sbjct: 132 LLRNQISGKTLSQEIKKNFLTKKVMQSYFLDEFLLPSESLEYAKFMFQKRKIQTLTLPIL 191 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 + Q + + + Y + + Y L++E +K Y Sbjct: 192 QYQKLQNVSEEEMEAYY-QNYPDQFLSSRKARISYIKLDIESQYENLNLKEEEFEFYKKN 250 Query: 182 TVLFSIPDNKLQNQGFVQ--KRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238 F+ P + + K + E + +KF++ G ++ Sbjct: 251 KKFFTNPPKNYYSMIQLDSIKDAELMIEKLSQGFSFEELAKKFSTDPFSAKKNGSIGWIE 310 Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTK 296 + L + K + + + + + K+ + +K Sbjct: 311 KEFLPQVIVSANLKKIGQISKIIEFEGKYLIFRLDRSINKSYKTFLESKSEIHDILLKSK 370 Query: 297 IEKHEAE----YVKKLRSNA 312 + + +++++ N+ Sbjct: 371 SSEKFYKIREFILEEIKENS 390 >gi|262371759|ref|ZP_06065038.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter junii SH205] gi|262311784|gb|EEY92869.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter junii SH205] Length = 96 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 22/68 (32%), Gaps = 1/68 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT-TNPYVTQ 264 ++ +++++ G+ + + L P L+ + P +Q Sbjct: 21 KKRIQSGADFSKIAKQYSTCNSAKRGGELGEVKKGQLVPVIDKLVFTAAERILHGPIKSQ 80 Query: 265 KGVEYIAI 272 G + I Sbjct: 81 FGFHLVEI 88 >gi|257125063|ref|YP_003163177.1| hypothetical protein Lebu_0266 [Leptotrichia buccalis C-1013-b] gi|257049002|gb|ACV38186.1| hypothetical protein Lebu_0266 [Leptotrichia buccalis C-1013-b] Length = 298 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 79/303 (26%), Gaps = 29/303 (9%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K VL + C+ + + S ++ K Sbjct: 1 MKNKIKIGVLTVLCVFALSCKNNAGQSGKVL------------------FESPDKQIKVY 42 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 E EL EK + + +++ A Q Sbjct: 43 ENEVNNELAKSLYSSGVDEKDLTSDQIAQMKQSIIKNIALNRALAIKGKEKKLDQDKKYT 102 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 L Q + N+ K + + R+ + + Sbjct: 103 ESTDILQEQLLASLATLNEVNDKAKVTDADAKNIYDANAANFTRQEDSVRLQLIVF--NT 160 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF----QN 248 + + +K+A + K + + G+ Q + + L +F + Sbjct: 161 SDSAKANQVLKEAIANPADFTSYARKYNANIQGVTEN--GETQEIPLTQLSSRFGPLNEA 218 Query: 249 LLKKSQNNTTNPYVT-QKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305 + N VT + + + ++ + L +K + Q K + + +Y+ Sbjct: 219 IKDVKAGQIVNKVVTVGNDLYVVKVLERNGKGLIPFEKVKETIKTQLRNQKRQVEQQKYL 278 Query: 306 KKL 308 K + Sbjct: 279 KSI 281 >gi|22536972|ref|NP_687823.1| foldase protein PrsA [Streptococcus agalactiae 2603V/R] gi|46396914|sp|Q8E0C6|PRSA_STRA5 RecName: Full=Foldase protein prsA; Flags: Precursor gi|22533826|gb|AAM99695.1|AE014228_16 protease maturation protein, putative [Streptococcus agalactiae 2603V/R] Length = 309 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 78/301 (25%), Gaps = 30/301 (9%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 L + + + + + T+ G+ IT D ++ K A Q + Sbjct: 11 FLTLMSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVK----------TSKAAQQSM 60 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + L + + G V+ + + A+ G S + Sbjct: 61 LTLILSRVFDTQYGDKVSDKKVSEAYNKTAKGYGNSFSSAL-------SQAGLTPEGYKQ 113 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +V+ E + Y T + I + V K Sbjct: 114 QIRTTMLVEYAVKEAAKKELTEA------NYKEAYKNYTPETSVQVIKLDAEDKAKSVLK 167 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260 +K ++ K+ + S G L + + F+ + + Sbjct: 168 DVKADGADFAKIAKEKTTATDKKVEYKFDSAG--TTLPKEVMSAAFKLDKNGVSDVVSTV 225 Query: 261 YVTQK--GVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAIIH 315 T I + DK + + + K L K + + K A + Sbjct: 226 DSTTYKTSYYIIKVTDKTEKKSDWKSYKNRLKEVILKDKTSDRAFQNKVISKALEKANVK 285 Query: 316 Y 316 Sbjct: 286 I 286 >gi|218440506|ref|YP_002378835.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cyanothece sp. PCC 7424] gi|218173234|gb|ACK71967.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cyanothece sp. PCC 7424] Length = 248 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 25/254 (9%), Positives = 74/254 (29%), Gaps = 31/254 (12%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 + + + IT+ D+ + +L +++I + + I E E ++ Sbjct: 3 VVLQVGEQKITESDLYPLLGQYRLL--PQLVKEIIIDQAIAEIECTPEEQQMARNL---- 56 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 + +N S E ++L +QGI + + + + K + Sbjct: 57 ------FYQQNQLTSEEKIQAWLKQQGITREQLEYLSLRELKLEKFKQVTWGNKIEPYFL 110 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 +I + + ++ G Q+ ++ + +K Sbjct: 111 KIKG---------------KLDRVIYSLIRTKDTGIAQELYFRIQDQENTFEE---LAKK 152 Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 ++ + G + + HP + + P + + I + + Sbjct: 153 YSQGPEAQTGGLIGPVELNVPHPTISQMLMGSQPGQLWPPTQIGEWIIIIRLEQRISTPL 212 Query: 281 EIALKAYLSAQNTP 294 + + + + Sbjct: 213 DQQTQQRILNELFQ 226 >gi|226951693|ref|ZP_03822157.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase) [Acinetobacter sp. ATCC 27244] gi|294651378|ref|ZP_06728696.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter haemolyticus ATCC 19194] gi|226837558|gb|EEH69941.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase) [Acinetobacter sp. ATCC 27244] gi|292822733|gb|EFF81618.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter haemolyticus ATCC 19194] Length = 96 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 22/68 (32%), Gaps = 1/68 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT-TNPYVTQ 264 ++ +++++ G+ + + L P L+ + P +Q Sbjct: 21 KKRIQSGADFSKIAKQYSTCNSAKRGGELGEVKKGQLVPVIDKLVFSAAERVLHGPIKSQ 80 Query: 265 KGVEYIAI 272 G + I Sbjct: 81 FGFHLLEI 88 >gi|290580866|ref|YP_003485258.1| putative protease maturation protein precursor [Streptococcus mutans NN2025] gi|254997765|dbj|BAH88366.1| putative protease maturation protein precursor [Streptococcus mutans NN2025] Length = 333 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 33/313 (10%), Positives = 78/313 (24%), Gaps = 40/313 (12%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K T L+ + ++ S + T+ G+ IT D + + Sbjct: 1 MKKRTIATGLVTLLSIVTLAACSKTNQNSKIATMKGDTITVADFYNEVK------NSTAS 54 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + L+ + +KQ +K + N + + + + Sbjct: 55 KQAVLSLLVSKVFEKQYGDKVSDKEVTKAYNEAAKYYGDSFSSALASRGYTKE------- 107 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 Q +++ + EI K + + V+ ++K Sbjct: 108 ----DYKKQIRSEKLIEYAVKEEAK---KEITDASYKSAYKDYKPEVTAQVIQLDSEDKA 160 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 ++ K + +K E + L Sbjct: 161 KSVLEEAKADGADFAKIAKDNTKGDKTEYSFDSGS-----------TNLPSQVLSAALNL 209 Query: 253 SQNNTTNPYVTQKG------VEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEK--HEAE 303 ++ ++ + I K D + A K L K+ Sbjct: 210 DKDGVSDVIKASDSTTYKPVYYIVKITKKTDKNADWKAYKKRLKEIIVSQKLNDSNFRNA 269 Query: 304 YVKKLRSNAIIHY 316 + K A + Sbjct: 270 VIGKAFKKANVKI 282 >gi|24379121|ref|NP_721076.1| foldase protein PrsA [Streptococcus mutans UA159] gi|46396905|sp|Q8CVC6|PRSA_STRMU RecName: Full=Foldase protein prsA; Flags: Precursor gi|24377024|gb|AAN58382.1|AE014908_8 putative protease maturation protein precursor [Streptococcus mutans UA159] Length = 333 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 33/313 (10%), Positives = 78/313 (24%), Gaps = 40/313 (12%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K T L+ + ++ S + T+ G+ IT D + + Sbjct: 1 MKKRTIATGLVTLLSIVTLAACSKTNQNSKIATMKGDTITVADFYNEVK------NSTAS 54 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + L+ + +KQ +K + N + + + + Sbjct: 55 KQAVLSLLVSKVFEKQYGDKVSDKEVTKAYNEAAKYYGDSFSSALASRGYTKE------- 107 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 Q +++ + EI K + + V+ ++K Sbjct: 108 ----DYKKQIRSEKLIEYAVKEEAK---KEITDASYKSAYKDYKPEVTAQVIQLDSEDKA 160 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 ++ K + +K E + L Sbjct: 161 KSVLEEAKADGADFAKIAKDNTKGDKTEYSFDSGS-----------TNLPSQVLSAALNL 209 Query: 253 SQNNTTNPYVTQKG------VEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEK--HEAE 303 ++ ++ + I K D + A K L K+ Sbjct: 210 DKDGVSDVIKASDSTTYKPVYYIVKITKKTDKNADWKAYKKRLKEIIVSQKLNDSNFRNA 269 Query: 304 YVKKLRSNAIIHY 316 + K A + Sbjct: 270 VIGKAFKKANVKI 282 >gi|322707187|gb|EFY98766.1| Peptidyl-prolyl cis-trans isomerase PIN4 [Metarhizium anisopliae ARSEF 23] Length = 124 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 26/85 (30%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A K ++ G + + L P+F+ + + Sbjct: 41 EKHAKKEEALAKLNDGVKFDEVARNYSED-KARQGGALGWKTKGSLDPKFEEAAFALEPS 99 Query: 257 TT--NPY---VTQKGVEYIAICDKR 276 TT T+ G I + ++ Sbjct: 100 TTNNPKIAEAKTEFGYHIIMVEGRK 124 >gi|323488673|ref|ZP_08093915.1| SurA domain-containing protein [Planococcus donghaensis MPA1U2] gi|323397691|gb|EGA90495.1| SurA domain-containing protein [Planococcus donghaensis MPA1U2] Length = 253 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 58/188 (30%), Gaps = 11/188 (5%) Query: 41 RIRTTINGEVITDGDIS-----------KRIALLKLQKINGELEKIAVQELIVETLKKQE 89 + +NGE IT D + L + +L++ L+ + L QE Sbjct: 61 EVVAEVNGEEITKEDFESIYTGQFEQMAMQSQLSGQEVDQSQLKEQVADSLVAQELLVQE 120 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 EK +T N + A+ GL++ D K+ + + + Sbjct: 121 TEKQKLTASEEQTNTALEELAQQNGLTSSDELLAALKEQGISEEEVMKQIETQVKIEQLI 180 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + E+ + K F +++ Q VQK + + Sbjct: 181 AAETGEIKLTDEELQTYYDEAKAQQEEAGGEEIPAFEDVKPQIEEQLKVQKESEATQALI 240 Query: 210 LRLPKDCN 217 +L + Sbjct: 241 AKLREQAE 248 >gi|50083929|ref|YP_045439.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) [Acinetobacter sp. ADP1] gi|49529905|emb|CAG67617.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase) [Acinetobacter sp. ADP1] Length = 95 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 22/68 (32%), Gaps = 1/68 (1%) Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT-TNPYVTQ 264 ++ +++++ G+ + + L P L+ + P +Q Sbjct: 21 KKKIQDGADFTKIAKQYSTCNSAKRGGELGEVKKGQLVPVIDKLVFSAAERVLHGPIKSQ 80 Query: 265 KGVEYIAI 272 G + I Sbjct: 81 FGFHLVEI 88 >gi|116208446|ref|XP_001230032.1| hypothetical protein CHGG_03516 [Chaetomium globosum CBS 148.51] gi|88184113|gb|EAQ91581.1| hypothetical protein CHGG_03516 [Chaetomium globosum CBS 148.51] Length = 181 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 13/163 (7%), Positives = 39/163 (23%), Gaps = 5/163 (3%) Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK---YGNLEMEIPANKQKM 170 S + + ++ + + ++ + K + Sbjct: 16 RHSNSKNLPYYFNSVEKVSRWEPPAETDTEKLKLYMAEYHSNKGLAAGTGEDRQPGKIRA 75 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDV 229 ++ V+ R + + + + IK E + Sbjct: 76 AHLLVKHRDSRRPSSWRENTITRTKEDAYEIIKAHEARIKGGEVSLGQLALTESDCSSAR 135 Query: 230 SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G + D+ +F++ + + T G+ I Sbjct: 136 KQGDLGFFGRGDMQKEFEDAAFALREGEVSGIVDTASGLHLIE 178 >gi|332519007|ref|ZP_08395474.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lacinutrix algicola 5H-3-7-4] gi|332044855|gb|EGI81048.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lacinutrix algicola 5H-3-7-4] Length = 711 Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 42/149 (28%), Gaps = 3/149 (2%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 + +K+ I ++ I + + S + TING+ I+ + Sbjct: 3 ILNKIRQKTVVLILVIALALFAFILSSLFDNKDALFNKSPNVVATINGKDISR---EAFM 59 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 A ++ Q + + ++ +++ ++ + S+ F Sbjct: 60 ARVEAQNNPNATQTQIMNQVYNAEVREAVMQSQFDKLGLTVGREQMRDLLKTNLASSPQF 119 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 + + ++ + Sbjct: 120 FNADGIFDENVLNNYIANLKETSPVAYRQ 148 Score = 42.7 bits (98), Expect = 0.069, Method: Composition-based stats. Identities = 19/240 (7%), Positives = 66/240 (27%), Gaps = 11/240 (4%) Query: 52 TDGDIS--KRIALLKLQKINGELEKIAVQ----ELIVETLKKQEIEKSGITFDSNTVNYF 105 T D+ + + +K +++ ++ A+Q +LI + + + + + Sbjct: 224 TKYDVEASRNLQYVKFEEVASVEDENAIQGELIKLIQNREEYVDGKNQMVAGFAEMNVEN 283 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + + + + + ++ ++ + ++ Sbjct: 284 AEAYVNANSDAEIKYQDKFVYKSSLPRALQDSISNLNVGNVYGPYKDGQTFKITKLLEKR 343 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + + + + + K + + Sbjct: 344 QLADSIQSSHILIPFVGSQAATAETTKTKEEAKATADSIFKLVKNNKTKYAEVANEINTD 403 Query: 226 IHDVSIGKAQYLLESDLHPQ-----FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 G + + +P F N L + + + +T+ G I I DK+++ Sbjct: 404 GSKGKDGSIGWTRLTTYNPLGFDPDFANFLFFNDKGSIDVVLTKFGYHIIRIDDKKNVDT 463 >gi|188996999|ref|YP_001931250.1| hypothetical protein SYO3AOP1_1079 [Sulfurihydrogenibium sp. YO3AOP1] gi|188932066|gb|ACD66696.1| hypothetical protein SYO3AOP1_1079 [Sulfurihydrogenibium sp. YO3AOP1] Length = 460 Score = 46.6 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 103/344 (29%), Gaps = 39/344 (11%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56 M K+ S I L T F + IV I+ YK + +NG+ I + Sbjct: 1 MFDKISQSKWKNIVLFITVFAFVATSIVAIIVYKLSGEING-VAEVNGKEIPFYEFNYAY 59 Query: 57 -----SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 + ++ L + + +++K V +LI + L QE EK GIT S V ++ + Sbjct: 60 EMTARNMQMQNLDISNLKDQIKKEVVNDLIEKELLYQEAEKEGITATSEQVKNEILKISA 119 Query: 112 N--TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 G + + + + + + + +K + + EI +K Sbjct: 120 FQVNGKFDKQTYLQIINSFGLTPDAFENILRKELSVNNLKTILLSTIYVSDEEIETFTKK 179 Query: 170 ---------------------MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 E + L N + +QK D + Sbjct: 180 QLTRVSGEATIIKPNTPEITEEMIKKFYEEHKKDYLAQTGKNITVYKIDIQKLGDDKAQQ 239 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD----LHPQFQNLLKK-SQNNTTNPYVT 263 + K S +V + + L + Q + +++ + T Sbjct: 240 LAKQLFTQAKSGNLQSVPAEVEKVFEGDVFSNQEIQNLPKEIQEDVNSLNKDKKVSFTKT 299 Query: 264 QKGVEY-IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 Q + + +K + + +K + K Sbjct: 300 QNEYYISVFNGESLKSIPYEQVKNEIKQKLERELSQKALQDMQK 343 Score = 42.4 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 16/158 (10%), Positives = 37/158 (23%), Gaps = 6/158 (3%) Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 K + + +++ V I + + +L Sbjct: 291 DKKVSFTKTQNEYYISVFNGESLKSIPYEQVKNEIKQKLERELSQKALQDMQKTTDITQL 350 Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 K ++ S + + DL+ + P T+ G+ + Sbjct: 351 LKQNKTEKQTISDNTIQELVVKFGIKREDLNKL----ANLKVGEISKPISTENGILIFKL 406 Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKL 308 + ++ K + K YV L Sbjct: 407 TEIKEPDKSQVDETKRTILPFIKSQKFNDVYQMYVDSL 444 >gi|254805018|ref|YP_003083239.1| peptidyl-prolyl cis-trans isomerse D [Neisseria meningitidis alpha14] gi|254668560|emb|CBA06033.1| peptidyl-prolyl cis-trans isomerse D [Neisseria meningitidis alpha14] gi|319410487|emb|CBY90848.1| putative peptidyl-prolyl cis-trans isomerase D (PPIase D; rotamase D) [Neisseria meningitidis WUE 2594] Length = 512 Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 83/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I+D I+ I + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 G Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-DGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ + + + ++N + + + + + Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLV--NLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKVSEADLQKFYNANKKDYLLPKAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + N P KA + + K + Sbjct: 238 AFEERVARLPANEAKP-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|313668353|ref|YP_004048637.1| peptidyl-prolyl cis-trans isomerase [Neisseria lactamica ST-640] gi|313005815|emb|CBN87269.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria lactamica 020-06] Length = 512 Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 31/309 (10%), Positives = 81/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I++ ++ I + Sbjct: 1 MFHSIEKYKTPAQVLLGLIALTFVGFGVSTVSRPGADYIVRVGDEKISEQSLNAAIQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 Q L+ KQ + GI+ S + V + + L Sbjct: 61 A-DGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDAGGKFDHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ + + + ++N + + + + + Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLV--NLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKVSEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQAVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + N P KA + + K + Sbjct: 238 AFEERVARLPANEAKP-------------------SFEQEKASVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|25010882|ref|NP_735277.1| foldase protein PrsA [Streptococcus agalactiae NEM316] gi|77409622|ref|ZP_00786296.1| rotamase family protein [Streptococcus agalactiae COH1] gi|77413120|ref|ZP_00789320.1| rotamase family protein [Streptococcus agalactiae 515] gi|46396916|sp|Q8E602|PRSA_STRA3 RecName: Full=Foldase protein prsA; Flags: Precursor gi|23095261|emb|CAD46471.1| Unknown [Streptococcus agalactiae NEM316] gi|77160821|gb|EAO71932.1| rotamase family protein [Streptococcus agalactiae 515] gi|77171768|gb|EAO74963.1| rotamase family protein [Streptococcus agalactiae COH1] Length = 309 Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 78/301 (25%), Gaps = 30/301 (9%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 L + + + + + T+ G+ IT D ++ K A Q + Sbjct: 11 FLTLMSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVK----------TSKAAQQSM 60 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + L + + G V+ + + A+ G S + Sbjct: 61 LTLILSRVFDTQYGDKVSDKKVSEAYNKTAKGYGNSFSSAL-------SQAGLTPEGYKQ 113 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +V+ E + Y T + I + V K Sbjct: 114 QIRTTMLVEYAVKEAAKKELTEA------NYKEAYKNYTPETSVQVIKLDAEDKAKSVLK 167 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260 +K ++ K+ + S G L + + F+ + + Sbjct: 168 DVKADGADFAKIAKEKTTATDKKVEYKFDSAG--TSLPKEVMSAAFKLDKNGVSDVVSTV 225 Query: 261 YVTQK--GVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAIIH 315 T I + DK + + + K L K + + K A + Sbjct: 226 DSTTYKTSYYIIKVTDKTEKKSDWKSYKNRLKEVILKDKTSDRSFQNKVISKALEKANVK 285 Query: 316 Y 316 Sbjct: 286 I 286 >gi|291529969|emb|CBK95554.1| PPIC-type PPIASE domain [Eubacterium siraeum 70/3] Length = 472 Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 9/127 (7%), Positives = 41/127 (32%), Gaps = 6/127 (4%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK--AQYLLESDLHPQFQNLLK-- 251 +K +++ +++++S + + G+ + + + + Sbjct: 304 EIKEKADAALKKATAEGADFDAVVKEYSSAYSESTKGEQILVLNSKGLISDALYDAVFAL 363 Query: 252 KSQNNTTNPYVTQKGVEYIA-ICDKRDLGGE-IALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + + T G + + D + + + + + ++ + +++ R Sbjct: 364 EKPGDISGLIPTDSGYYIVKYVSDAKVTDSDLSDYRKTVRQELLTSRQSEKTNAILEEWR 423 Query: 310 SNAIIHY 316 S Y Sbjct: 424 SAVNYEY 430 >gi|322652566|gb|EFY48920.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] Length = 141 Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 16/141 (11%), Positives = 38/141 (26%), Gaps = 17/141 (12%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T+ + + + +++ F + + Y S+ +NG+ I+ Sbjct: 1 MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYL-IGGSNNYAAKVNGQEISRAQFENAF 59 Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + + L + + LI E L Q + + V Sbjct: 60 NNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQ 119 Query: 105 FFVQHARNTGLSAEDFSSFLD 125 D + + Sbjct: 120 AIFATPAFQVDGKFDNNRYNA 140 >gi|148264907|ref|YP_001231613.1| hypothetical protein Gura_2867 [Geobacter uraniireducens Rf4] gi|146398407|gb|ABQ27040.1| hypothetical protein Gura_2867 [Geobacter uraniireducens Rf4] Length = 525 Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 2/57 (3%) Query: 260 PYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 P+ + + + + K L P K ++ ++K+L+S A I Sbjct: 460 PFKVGNSWYAVKLKQRTEANTADFQKSKEQLKQALLPKKQQETLDNWLKELKSKAKI 516 Score = 42.7 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 22/179 (12%), Positives = 60/179 (33%), Gaps = 21/179 (11%) Query: 15 LLTTYFVLIIFCIVP----IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK------ 64 L+ F +I+F + + S +NG I+ + K +K Sbjct: 13 LIKIVFCVIVFSFIGTIFLVWGRGDKTDSGDFAAKVNGTKISFDEYQKNYYRMKGIYEQI 72 Query: 65 -------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG--- 114 + ++K A++ LI L +E ++ GI + + ++ + Sbjct: 73 YGRSMTPEMEKQLGIKKTALESLIDNALILKEAKRLGIDVNRDEISAEIAKMPAFQKDGV 132 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 + + ++ L I +F++ + + + + + ++ +K + Sbjct: 133 FNFDQYTQMLKANRITPQNFEESMEEDMLVKKT-REKIKERATVSDQDLLQAFKKQNDK 190 >gi|319947343|ref|ZP_08021576.1| peptidyl-prolyl cis-trans isomerase [Streptococcus australis ATCC 700641] gi|319746585|gb|EFV98845.1| peptidyl-prolyl cis-trans isomerase [Streptococcus australis ATCC 700641] Length = 313 Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 34/315 (10%), Positives = 84/315 (26%), Gaps = 42/315 (13%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + + +V + + I T+ G+ IT GD I N + Sbjct: 1 MKKKFVAGAVTLLSVVTLAACAKGGSDKDIV-TMKGDTITVGDFYDEIK-------NNQG 52 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + ++ + + ++E D E F+S+L +QG+ + Sbjct: 53 AQQYLFQMTINKVFEKEYGSKVSDKDVEKKVDE------QKKQLGEAFNSYLTQQGLTEE 106 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 KQ + + V + + + + Sbjct: 107 TNKQQIRSNLLLEYAVDQAISKELTDEAYKKAFETYTPEITANVI--------------- 151 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLK 251 +K + + ++ ++ G+ ++ + P Sbjct: 152 -KLDSEEKANEVLASVKAEGADFAQIAKENSTDASTKEKGGEIKFDSGTTTVPTRVKEAA 210 Query: 252 KS--QNNTTNPY------VTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKH-- 300 N ++ + + + K + G + + L T + Sbjct: 211 SKLDVNGISDVVIDPASQKSAGAYYIVKVTKKEEKGSDWKKYEKRLKEILTAERKNDANF 270 Query: 301 EAEYVKKLRSNAIIH 315 + K +NA I Sbjct: 271 IRSIIAKAMTNANIK 285 >gi|322698453|gb|EFY90223.1| Peptidyl-prolyl cis-trans isomerase PIN4 [Metarhizium acridum CQMa 102] Length = 124 Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 27/85 (31%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A K ++ G + + L P+F+ + + + Sbjct: 41 EKHAKKEEALAKLNDGVKFDEVARNYSED-KARQGGALGWKTKGSLDPKFEEVAFALEPS 99 Query: 257 TT--NPY---VTQKGVEYIAICDKR 276 TT T+ G I + ++ Sbjct: 100 TTNNPKIAEARTEFGYHIIMVEGRK 124 >gi|260663478|ref|ZP_05864368.1| peptidylprolyl isomerase [Lactobacillus fermentum 28-3-CHN] gi|260552019|gb|EEX25072.1| peptidylprolyl isomerase [Lactobacillus fermentum 28-3-CHN] Length = 325 Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 29/299 (9%), Positives = 77/299 (25%), Gaps = 34/299 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 + ++ A ++ T +G IT+ + + K +Q++I+ Sbjct: 2 LAIIAGLALALPLAACGNKAVATTSGGKITESEYYSSMK-------QTSNGKQVLQQMIL 54 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + +++ T + N+ + + ++ + K Q Sbjct: 55 DKVLEKQYGSKVSTSEVNSEYNAYKKEYGSSFSTVLSEEGLTAK----------SFKQQI 104 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 ++K + +K + ++ + Sbjct: 105 RSNLLLKAAVRNYSTFSSSALKKQWKKYEPKVQTAEIL----------VGSKETAQSIID 154 Query: 203 KDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYL--LESDLHPQFQNLLKK-SQNNTT 258 S +L + + ++ + G ++ L ++ T Sbjct: 155 TLNNTSGSKLKEFKKLAKSKSTDTTTKSNGGVLSAFDNTDTSLPSAYRKAAFALKTGEYT 214 Query: 259 -NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314 P T G I + G + + L Q + V K+ I Sbjct: 215 TEPVKTDNGYYVIYMIKHPAKGKYSSHISDLKDQIVTQNLNNSTFLHNVVSKVLKKGDI 273 >gi|76788083|ref|YP_329554.1| foldase protein PrsA [Streptococcus agalactiae A909] gi|123601968|sp|Q3K1P9|PRSA_STRA1 RecName: Full=Foldase protein prsA; Flags: Precursor gi|76563140|gb|ABA45724.1| foldase protein PrsA [Streptococcus agalactiae A909] gi|319744849|gb|EFV97187.1| peptidyl-prolyl cis-trans isomerase [Streptococcus agalactiae ATCC 13813] Length = 309 Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 78/301 (25%), Gaps = 30/301 (9%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 L + + + + + T+ G+ IT D ++ K A Q + Sbjct: 11 FLTLMSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVK----------TSKAAQQSM 60 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + L + + G V+ + + A+ G S + Sbjct: 61 LTLILSRVFDTQYGDKVSDKKVSEAYNKTAKGYGNSFSSAL-------SQAGLTPEGYKQ 113 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +V+ E + Y T + I + V K Sbjct: 114 QIRTTMLVEYAVKEAAKKELTEA------NYKEAYKNYTPETSVQVIKLDAEDKAKSVLK 167 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260 +K ++ K+ + S G L + + F+ + + Sbjct: 168 DVKADGADFAKIAKEKTTATDKKVEYKFDSAG--TSLPKEVMSAAFKLDKNGVSDVVSTV 225 Query: 261 YVTQK--GVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAIIH 315 T I + DK + + + K L K + + K A + Sbjct: 226 DSTTYKTSYYIIKVTDKTEKKSDWKSYKNRLKEVILKDKTSDRAFQNKVISKALEKANVK 285 Query: 316 Y 316 Sbjct: 286 I 286 >gi|254797079|ref|YP_003081917.1| hypothetical protein NRI_0706 [Neorickettsia risticii str. Illinois] gi|254590325|gb|ACT69687.1| conserved hypothetical protein [Neorickettsia risticii str. Illinois] Length = 307 Score = 46.2 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 21/166 (12%), Positives = 55/166 (33%), Gaps = 12/166 (7%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL-EKIA 76 + V+ + ++ S S+++ + + +I++ D+ L+ + +L A Sbjct: 1 MFRVICVVFLLSFFSLPSYSIEVKTAAMVGDVIISNQDVHNYQNLVVMLGEKSDLSYSAA 60 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 ++++I + Q ++ G+ F + + Sbjct: 61 LEQMIDLEVCYQYAKRVGLPFSDQKYDAALKHLQALGINRGAHVGLLEE----------- 109 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 YL Q +VV + + + A K+++ L R Sbjct: 110 YLKKQVFLSEVVDQIIRPRVRIDDSDFDAIKRELLKKKNTFKLKRI 155 >gi|134278147|ref|ZP_01764861.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei 305] gi|134249931|gb|EBA50011.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei 305] Length = 280 Score = 46.2 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 24/309 (7%), Positives = 72/309 (23%), Gaps = 59/309 (19%) Query: 23 IIFCIVPIVSYKSWAMSSR----IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78 + + +++ + A + T+N + + I L Sbjct: 11 AVSVLFGLLAATANAQQGKGGADAFATVNDVQLYRSQLEAFIKQSGLP-DTDATRAQIEN 69 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 ++I + +Q EK+ Q Sbjct: 70 DMISGEVVRQAAEKANYGDRKEVA------------------------------AIVQMA 99 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 ++ ++++ + + + EY + + Sbjct: 100 KTKAESELYLRDNVKVAPVSDSEVKARYDAMVAGAGRLEYKPQII-----------SVND 148 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL----------LESDLHPQFQN 248 + + + +++ + + G ++ + P + Sbjct: 149 DATAGKVLAALKQGHSFDDLARQYSVASNRATGGAMGWVTFKTPVQEGQTQGVPFPMAKA 208 Query: 249 LLKKSQNNTTNP-YVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYV 305 + I + D R +K+ L Q + +K V Sbjct: 209 MANLKAGEYAQTAVALGDARVIIKMSDVRPTKILSYDEIKSALRQQLEAAERQKATDTLV 268 Query: 306 KKLRSNAII 314 ++L + A + Sbjct: 269 QQLLNEATV 277 >gi|296876819|ref|ZP_06900867.1| peptidyl-prolyl cis-trans isomerase [Streptococcus parasanguinis ATCC 15912] gi|296432321|gb|EFH18120.1| peptidyl-prolyl cis-trans isomerase [Streptococcus parasanguinis ATCC 15912] Length = 314 Score = 46.2 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 31/310 (10%), Positives = 88/310 (28%), Gaps = 36/310 (11%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + V ++ +V+ + A S ++ T+ G+ IT D I + + + Sbjct: 1 MKKKLVAGAVTLLSVVTLAACANSTNKDVVTMKGDTITVSDFYDEIK-------SNQGAQ 53 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + ++ + + ++E + + A+ F ++L +QG+ + Sbjct: 54 QVLFQMTINKVFEKEYGSKISDKEVDKEL------AKQKKQLGNQFDAYLAQQGLTEETA 107 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 K+ + + V + + + ++ ++K + Sbjct: 108 KKQIRSNMLLEYAVSQAAKKDIKESDYKTAFESY-------TPEVTAQIIKLDSEDKAKE 160 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 K + + ++ S + K + Sbjct: 161 VLEAAKAEGADFAKIAKDNSTDTATKDKGGEVKFDSG------TADIPSQVKEAAFKLDE 214 Query: 255 NNTTNPYVTQKG------VEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEK--HEAEYV 305 N ++ G + + K + G + + L + + + + Sbjct: 215 NGISDVITVSAGQNYSASYYIVKLNKKTEKGSDWKKYEKRLKEIIIEGRKQDTNYIRSII 274 Query: 306 KKLRSNAIIH 315 K +NA I Sbjct: 275 AKAMTNANIK 284 >gi|262377504|ref|ZP_06070726.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter lwoffii SH145] gi|262307560|gb|EEY88701.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter lwoffii SH145] Length = 94 Score = 46.2 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 26/75 (34%), Gaps = 1/75 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT- 257 ++ + ++ L +++++ G+ + + L P L+ + Sbjct: 14 KETAEQLKKKILSGADFNKIAKQYSTCNSAKRGGELGEVKKGQLVPVIDKLVFTAAERVL 73 Query: 258 TNPYVTQKGVEYIAI 272 P +Q G + I Sbjct: 74 HGPVKSQFGFHLVEI 88 >gi|304387500|ref|ZP_07369689.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis ATCC 13091] gi|304338387|gb|EFM04508.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis ATCC 13091] Length = 512 Score = 46.2 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 31/309 (10%), Positives = 82/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I+D I+ + + Sbjct: 1 MFHSIEKYRTPAQILLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAMQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-GGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ + + + ++N + + + + + Sbjct: 120 NRYLSQRHMSEDQFVEEIHDQFALQNLV--NLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKVSEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 ++ + + N P KA + + K + Sbjct: 238 VYEERVARLPANEAKP-------------------SFEQEKAAIENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|254671966|emb|CBA04388.1| peptidyl-prolyl cis-trans isomerse D [Neisseria meningitidis alpha275] Length = 512 Score = 45.8 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 83/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I+D I+ I + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 G Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-DGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ + + + ++N + + + + + Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLV--NLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKVSEADLQKFYNANKKDYLLPKAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + N P KA + + K + Sbjct: 238 AFEERVARLPANEAKP-------------------SFEQEKAAVENELKMKKAVTDFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|227515601|ref|ZP_03945650.1| peptidylprolyl isomerase [Lactobacillus fermentum ATCC 14931] gi|227086031|gb|EEI21343.1| peptidylprolyl isomerase [Lactobacillus fermentum ATCC 14931] Length = 313 Score = 45.8 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 26/282 (9%), Positives = 73/282 (25%), Gaps = 32/282 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 + ++ A ++ T +G IT+ + + K +Q++I+ Sbjct: 2 LAIIAGLALALPLAACGNKAVATTSGGKITESEYYSSMK-------QTSNGKQVLQQMIL 54 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + +++ T + N+ + + ++ + K Q Sbjct: 55 DKVLEKQYGSKVSTSEVNSEYNAYKKEYGSSFSTVLSEEGLTAK----------SFKQQI 104 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 ++K + +K + ++ + Sbjct: 105 RSNLLLKAAVRNYSTFSSSALKKQWKKYEPKVQTAEIL----------VGSKETAQSIID 154 Query: 203 KDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYL--LESDLHPQFQNLLKK-SQNNTT 258 S +L + + ++ + G ++ L ++ T Sbjct: 155 TLNNTSGSKLKEFKKLAKSKSTDTTTKSNGGVLSAFDNTDTSLPSAYRKAAFALKTGEYT 214 Query: 259 -NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 P T G I + G + + L Q + Sbjct: 215 TEPVKTDNGYYVIYMIKHPAKGKYSSHISDLKDQIVTQNMNN 256 >gi|225180894|ref|ZP_03734342.1| SurA domain protein [Dethiobacter alkaliphilus AHT 1] gi|225168375|gb|EEG77178.1| SurA domain protein [Dethiobacter alkaliphilus AHT 1] Length = 241 Score = 45.8 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 30/234 (12%), Positives = 65/234 (27%), Gaps = 16/234 (6%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS----SRIRTTINGEVITDGDISKRI 60 + + F LL ++ + + + ++ T+NG IT D S ++ Sbjct: 3 IIKTKKVFFTLLVFSVLISLVALGGCSEQATDGNEETDGNKAIATVNGVGITYDDFSAQL 62 Query: 61 ALLKLQKING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 + LE AV+ LI E L QE E I + ++ Q Sbjct: 63 LEFEQLAQMQGMSLEDPETVTILENQAVEVLINEQLLLQEAENKDIQISQSEIDEQIDQM 122 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 F L QG+ + + V + + + Sbjct: 123 KS-GFEDDGQFEEALAAQGVEIEELADLIREDMLIQAVFAETVPNISVSEDEITDEEINE 181 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + + + + + + E + + +L + + Sbjct: 182 VYDQQQQMAEAQGMDLPPLEELEAEVVAFIIQQMQEAEEKQAIENLLAELRENS 235 >gi|257083614|ref|ZP_05577975.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis Fly1] gi|256991644|gb|EEU78946.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis Fly1] Length = 336 Score = 45.8 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 25/315 (7%), Positives = 78/315 (24%), Gaps = 41/315 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K + +L + + S + + S+ T+ G IT D +I Sbjct: 3 KRMKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTS 55 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A ++++ + +++ + + + E Sbjct: 56 QQAFSQMVIYKVFEEKYGD-------KVTDKAIQKKFDDAKKQVEAQGGKFSDALTQAGL 108 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 ++ Q + ++ + ++ + + Sbjct: 109 TEKSFKKQLKQAEAMQVGLKDHLKITDEDLKTAWASFHPEVEAQII-------------- 154 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQF--QNLL 250 Q + K ++ + + GK ++ +S P + Sbjct: 155 -QVASEDDAKAVKKEITDGGDFAKIAKDKSTDAATKKDGGKIKFDSQSTTVPAEVKEAAF 213 Query: 251 KKSQNNTTNPYVTQKG------VEYIAICDKRDLGGE-IALKAYLSAQNTPTKI--EKHE 301 K + P + + + G + + + TK+ + Sbjct: 214 KLKDGEVSEPIAATNAQTYQTTYYVVKMTKNKAKGNDMKPYEKEIKKIAEETKLADQTFV 273 Query: 302 AEYVKKLRSNAIIHY 316 ++ + A + Sbjct: 274 SKVISDELKAANVKI 288 >gi|322389168|ref|ZP_08062729.1| peptidyl-prolyl cis-trans isomerase [Streptococcus parasanguinis ATCC 903] gi|321144073|gb|EFX39490.1| peptidyl-prolyl cis-trans isomerase [Streptococcus parasanguinis ATCC 903] Length = 314 Score = 45.8 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 29/310 (9%), Positives = 84/310 (27%), Gaps = 36/310 (11%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + V ++ +V+ + A ++ T+ G+ IT D I + + Sbjct: 1 MKKKLVAGAVTLLSVVTLAACANGTNKDIVTMKGDTITVSDFYNEIK-------TNQGAQ 53 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + ++ + + ++E + + A+ F ++L +QG+ + Sbjct: 54 QVLFQMTINKVFEKEYGSKVSDKEVDKEL------AKQKKQLGNRFDAYLAQQGLTEETA 107 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 K+ + + V + + + ++ ++K + Sbjct: 108 KKQIRSNMLLEYAVNQAAKKDIKESDYKAAFESY-------TPEVTAQIIKLDSEDKAKE 160 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 K + + ++ S + K + Sbjct: 161 VLEAAKAEGADFAQIAKDNSTDTTTKDKGGEVKFDSG------TADIPSQVKEAAFKLDE 214 Query: 255 NNTTNPYVTQKG------VEYIAICDKRDLGGEIALKAYLSAQNT---PTKIEKHEAEYV 305 N ++ G + + K + G + + + + + Sbjct: 215 NGISDVITVSAGQNYSASYYIVKLNKKTEKGSDWKKYEKRLKEIIVDGRKQDTNYIRSII 274 Query: 306 KKLRSNAIIH 315 K +NA I Sbjct: 275 AKAMTNANIK 284 >gi|295425340|ref|ZP_06818043.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus amylolyticus DSM 11664] gi|295065116|gb|EFG56021.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus amylolyticus DSM 11664] Length = 302 Score = 45.8 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 22/288 (7%), Positives = 63/288 (21%), Gaps = 39/288 (13%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 SS + G IT + + + + +I+ ++ Sbjct: 23 ACSNGSSSTVASYKGGKITQQQYYDEMK-------KSQSGQSTLANMIIYRALNEQYGSK 75 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + + N + + + S + + + Sbjct: 76 VSSSEVN----------KQYNNYKKQYGSQFSAVLQQNGMTPSSFKQNLKTNLLSEAALK 125 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + + + ++ +L + + + Sbjct: 126 DIKKVTKAQEKKAW----KTYQPKVTVQHIL-----------VSKKSTAQKIIKELKAGK 170 Query: 214 KDCNKLEKFA-SKIHDVSIGKAQYLLESD---LHPQFQNLLKKSQNNT-TNPYVTQKGVE 268 + +K++ + GK +D K + P +Q G Sbjct: 171 SFASLAKKYSLDTATKNNAGKLPAFDSTDTTLDPSFKTAAFKLKTGEVTSTPVKSQSGYH 230 Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314 I + G K + + + E + + A + Sbjct: 231 VIKMIKHPSKGTFAEHKKTIDNLIYASMAQDQTTMREVIATVLKRANV 278 >gi|293385010|ref|ZP_06630844.1| foldase protein PrsA [Enterococcus faecalis R712] gi|293389280|ref|ZP_06633742.1| foldase protein PrsA [Enterococcus faecalis S613] gi|312905999|ref|ZP_07765012.1| putative foldase protein PrsA [Enterococcus faecalis DAPTO 512] gi|312909345|ref|ZP_07768201.1| putative foldase protein PrsA [Enterococcus faecalis DAPTO 516] gi|291077688|gb|EFE15052.1| foldase protein PrsA [Enterococcus faecalis R712] gi|291081444|gb|EFE18407.1| foldase protein PrsA [Enterococcus faecalis S613] gi|310627994|gb|EFQ11277.1| putative foldase protein PrsA [Enterococcus faecalis DAPTO 512] gi|311290369|gb|EFQ68925.1| putative foldase protein PrsA [Enterococcus faecalis DAPTO 516] Length = 362 Score = 45.8 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 26/315 (8%), Positives = 79/315 (25%), Gaps = 41/315 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K + +L + + S + + S+ T+ G IT D +I Sbjct: 19 KRMKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTS 71 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A ++++ + +++ + + + E Sbjct: 72 QQAFSQMVIYKVFEEKYGD-------KVTDKAIQKKFDDAKKQVEAQGGKFSDALTQAGL 124 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 ++ Q + ++ + ++ + + Sbjct: 125 TEKSFKKQLKQAEAMQVGLKDHLKITDEDLKTAWASFHPEVEAQII-------------- 170 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQF--QNLL 250 Q + K ++ + + GK ++ +S P + Sbjct: 171 -QVASEDDAKAVKKEITDGGDFAKIAKDKSTDAATKKDGGKIKFDSQSTTVPAEVKEAAF 229 Query: 251 KKSQNNTTNPYVTQKG------VEYIAICDKRDLGGE-IALKAYLSAQNTPTKI--EKHE 301 K + P + + + G + + + TK+ + + Sbjct: 230 KLKDGEVSEPIAATNAQTYQTTYYVVKMTKNKAKGNDMKPYEKEIKKIAEETKLADQTFQ 289 Query: 302 AEYVKKLRSNAIIHY 316 A+ + A + Sbjct: 290 AKVISDELKAANVKI 304 >gi|167749278|ref|ZP_02421405.1| hypothetical protein EUBSIR_00229 [Eubacterium siraeum DSM 15702] gi|167657771|gb|EDS01901.1| hypothetical protein EUBSIR_00229 [Eubacterium siraeum DSM 15702] Length = 472 Score = 45.8 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 9/127 (7%), Positives = 41/127 (32%), Gaps = 6/127 (4%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK--AQYLLESDLHPQFQNLLK-- 251 +K +++ +++++S + + G+ + + + + Sbjct: 304 EIKEKADAALKKATADGADFDAVVKEYSSAYSESTAGEQILVLNSKGLISDALYDAVFAL 363 Query: 252 KSQNNTTNPYVTQKGVEYIA-ICDKRDLGGE-IALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + + + T G + + D + + + + + ++ + +++ R Sbjct: 364 EKPGDISGLIPTDSGYYIVKYVSDAKVTDSDLSDYRKTVRQELLTSRQSEKTNAILEEWR 423 Query: 310 SNAIIHY 316 S Y Sbjct: 424 SAVNYEY 430 >gi|325144618|gb|EGC66917.1| hypothetical protein NMBM01240013_1034 [Neisseria meningitidis M01-240013] gi|325205986|gb|ADZ01439.1| conserved hypothetical protein [Neisseria meningitidis M04-240196] Length = 512 Score = 45.8 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 30/309 (9%), Positives = 82/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I++ ++ + + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISEQSLNAAVQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-DGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ + + + ++N + + + + + Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLV--NLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKVSEADLQKFYNANKKDYLLPKAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + N P KA + + K + Sbjct: 238 AFEERVARLPANEAKP-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|158339544|ref|YP_001520933.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acaryochloris marina MBIC11017] gi|158309785|gb|ABW31401.1| conserved hypothetical protein, possible PpiC-type peptidyl-prolyl cis-trans isomerase [Acaryochloris marina MBIC11017] Length = 250 Score = 45.8 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 21/229 (9%), Positives = 54/229 (23%), Gaps = 15/229 (6%) Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 ELI + Q + + ++ + + E F Sbjct: 16 ELIPLLGQYQLLPQLLKELITDQAIQEVPLSSEERVQAVEQFYHQYQIGDDTQREAWLKH 75 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 ++ + K Q N ++L F L Sbjct: 76 YCMTLQQMAAQAQRQFKLQ------KFKLQTWNNQVESDFLQHKGQFDQYVYSLIRVASA 129 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNT 257 + + + + +++ + G + + + Q L Sbjct: 130 EVAQELYFRLQGDEQAFSDLATQYSQGPEAQTGGLIGPVTATHMHPTLVQLLTNAQPGQV 189 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 P + + + + + A L A +E+ E+++ Sbjct: 190 RPPIRLGEWFVIVRL--------QTFISAQLDAPLRQQLLEQRFNEWLQ 230 >gi|319789891|ref|YP_004151524.1| hypothetical protein Theam_0916 [Thermovibrio ammonificans HB-1] gi|317114393|gb|ADU96883.1| hypothetical protein Theam_0916 [Thermovibrio ammonificans HB-1] Length = 187 Score = 45.8 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 52/179 (29%), Gaps = 7/179 (3%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ----KINGELEKIAVQ 78 + ++ +V S A S+++ +NG+ ITD D++ I L Q K N K ++ Sbjct: 4 LTVALLTLVVATSSAASAKVLAEVNGKKITDKDLNAAIDSLPPQYHTLKNNPTFRKRMLE 63 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 L+ E L QE K G+ D R K + K + Sbjct: 64 NLVKEELLYQEALKEGLENDPAFKRRLEQIKKRLLVQYLLSKHVKPPKVEVTKKEAKAFY 123 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197 + + + +E + + + Sbjct: 124 EKN---KKMFTDATGKQVPFSAVEPFIMENLKRQKEQEALNRAVENYVKNLEAHAKVKI 179 >gi|218437417|ref|YP_002375746.1| hypothetical protein PCC7424_0412 [Cyanothece sp. PCC 7424] gi|218170145|gb|ACK68878.1| conserved hypothetical protein [Cyanothece sp. PCC 7424] Length = 241 Score = 45.8 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 33/259 (12%), Positives = 82/259 (31%), Gaps = 24/259 (9%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 + IT+ +I K++ L + V++++ + + E +K GIT D + Sbjct: 2 VQTVKITEEEILKQVKLSSMMTD-------VVKDIVNRKIIEDETQKLGITVDEKELQQA 54 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + L + + + +NH + ++ + + +I Sbjct: 55 ADKLRLMYQLYKAEDTWK----WLKENHLTVDDFEEIVFNKALSSKLA--VHLFNDKIEP 108 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + + +L ++ + +E + + ++ + Sbjct: 109 YYYEHQLDYTGVIMYEVILN--------DEELALELFYALQEGEITFSEIAHQYIE--DT 158 Query: 226 IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 G + DL P+ + P VT KGV I + + + L Sbjct: 159 ELRRKGGYRGLVYRKDLKPEISATVFAAKPPQVIKPIVTSKGVHLILVEEIIQRQLDNPL 218 Query: 285 KAYLSAQNTPTKIEKHEAE 303 + ++ +EKH + Sbjct: 219 RHIIANSLFNEWLEKHTQQ 237 >gi|150388633|ref|YP_001318682.1| hypothetical protein Amet_0798 [Alkaliphilus metalliredigens QYMF] gi|149948495|gb|ABR47023.1| hypothetical protein Amet_0798 [Alkaliphilus metalliredigens QYMF] Length = 233 Score = 45.8 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 27/232 (11%), Positives = 66/232 (28%), Gaps = 17/232 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +FT S + + ++ + T+NG IT + K Sbjct: 1 MFTKKSLLF--IVVGLIALLVIGCASEGENLSQDQGEVVATVNGASITREVFENTVERTK 58 Query: 65 LQKING--------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 L ++ + A+ L+ E + QE ++ G + Sbjct: 59 LNYQQQGIEFEGEEGEAMLVQVREQALNSLLQEEVLLQEAKEKGYDVSEEAIETELESMK 118 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 E ++ L+ ++ + LA + ++N+ + E Q Sbjct: 119 GQFESEEEFEAA-LEFNQFTEDDLRNMLASEMAIEQFLQNELEEAPASDEEAQELYDQYA 177 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + +++ Q +Q ++ +E +L + + Sbjct: 178 AQMKEIAEETGETEEMPAFEEVKEQLKMQIAQENQQELMAQLIDGLMEQSEI 229 >gi|149911665|ref|ZP_01900274.1| putative peptidyl-prolyl cis-trans isomerase C [Moritella sp. PE36] gi|149805246|gb|EDM65262.1| putative peptidyl-prolyl cis-trans isomerase C [Moritella sp. PE36] Length = 93 Score = 45.8 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 8/76 (10%), Positives = 22/76 (28%), Gaps = 1/76 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQNNT 257 Q + + + + + + G + + P F + ++ T Sbjct: 15 QDKAYEILKKLEKGENFQKLAKSHSICPSGKKDGGNLGEFRKGAMVPAFDKVCFNAEILT 74 Query: 258 TNPYVTQKGVEYIAIC 273 + T+ G + I Sbjct: 75 PHLVKTKHGWHIVKIL 90 >gi|326790212|ref|YP_004308033.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium lentocellum DSM 5427] gi|326540976|gb|ADZ82835.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium lentocellum DSM 5427] Length = 337 Score = 45.8 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 30/326 (9%), Positives = 97/326 (29%), Gaps = 29/326 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI-----------TDGDISKR-- 59 +K ++ ++++ + A I T+N E + T + Sbjct: 1 MKSISRTLIMLVLASIIAFGLTGCAKE-TIVATVNSEKVSEPLYRIFLWSTQRGLESILP 59 Query: 60 ----IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 + ++ + ++ A++ + KQ+ E++GI + + A+N Sbjct: 60 DIWDVDPIEGKTPEEFAKERALKSITYYVAVKQKAEEAGINKLTKEEKSAIKESAKNYVE 119 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + ++F + + F +Y ++ + ++ L+ + +++ + + Sbjct: 120 TNKEFVTNYGIKQKDYEKFLEYGKLEEKVVSQLGGTYIPNEEELKEAMKVLEEEGEFTSS 179 Query: 176 REYLIRTVLFSIPDNKL---QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + +KR +D L K++ + Sbjct: 180 ATITHVLIKNKDEQGNTLPSDKDAEAKKRAEDVLNQALNGEDLTILARKYSEDAAVSTND 239 Query: 233 KAQYLLESDLHPQFQNLLKKSQN---NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 + ++ + ++ T G E + + + D+ +A + Sbjct: 240 GQYTFKKGEMEESLEEVVFNEAKIGAVYPKLIETSMGYEIVKVEELNDMDEVTMKEAAIR 299 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + +L + + Sbjct: 300 KI-----QQDFVNHELSELSATYKVE 320 >gi|161870081|ref|YP_001599251.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis 053442] gi|161595634|gb|ABX73294.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis 053442] Length = 512 Score = 45.8 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 30/309 (9%), Positives = 82/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I++ ++ + + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISEQSLNAAVQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-DGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ + + + ++N + + + + + Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLV--NLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKVSEADLQKFYNANKKDYLLPKAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + N P KA + + K + Sbjct: 238 AFEERVARLPANEAKP-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|325128356|gb|EGC51240.1| hypothetical protein NMXN1568_0938 [Neisseria meningitidis N1568] Length = 512 Score = 45.8 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 83/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I+D I+ I + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 G Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-DGGGLSRDAVFQSLLQRAYLKQGSKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ + + + ++N + + + + + Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLV--NLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKVSEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + N P KA + + K + Sbjct: 238 AFEERVARLPTNEAKP-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|207109059|ref|ZP_03243221.1| hypothetical protein HpylH_06914 [Helicobacter pylori HPKX_438_CA4C1] Length = 240 Score = 45.8 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 6/154 (3%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 +NG IT I + Q+ + + A LI E +K QEIE+ I D + ++ Sbjct: 70 VNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDDKLDQE 123 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 A+ G+ + F L +G + Q + + + E ++ Sbjct: 124 MAMMAQQQGMDLDHFKQMLMAEGHYKLYRDQLKEHLEMQELLRNILLTNVDTSSETKMRE 183 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 K K I TV ++ + + + Sbjct: 184 YYNKHKEQFSIPTEIETVRYTSTNQEDLERAMAD 217 >gi|209526676|ref|ZP_03275200.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Arthrospira maxima CS-328] gi|209492912|gb|EDZ93243.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Arthrospira maxima CS-328] Length = 254 Score = 45.8 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 22/254 (8%), Positives = 61/254 (24%), Gaps = 7/254 (2%) Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 L + + ++Q L + + + + + N + Sbjct: 5 FLTINDNDSLTLSQSLQYLQNSGKLQDFLANILRQYVIDKELQSRDEVNSNAAAIEQAVI 64 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 +F ++ + D Q + + F + N +K + R Sbjct: 65 NFRLERNLSDPQAFQTWLDE---NRLTYKSFHDQVSNGFKRETLKLAVVKENLEEYFQER 121 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + + +++ G + ++ Sbjct: 122 KPFLDSVVLSRIVVDDYEMAESLKSKIASGEGSFEALAREYSLTTERRVNGMMGAVSKAT 181 Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 L ++ ++ P+ + I + D+ E + Q ++ Sbjct: 182 LPDTLKSTIEGAKVGQIIGPFEVEGRWCLFRIEEFIDVTLET---KGIKKQLQDELFDRW 238 Query: 301 EAEYVKKLRSNAII 314 E +K L I Sbjct: 239 MNEQLKTLTVKMQI 252 >gi|325185890|emb|CCA20396.1| PpiCtype peptidylprolyl cistrans isomerase putative [Albugo laibachii Nc14] Length = 177 Score = 45.4 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 34/104 (32%) Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 L ++ + V ++ ES+ K + G Y+ + + Sbjct: 22 LAHARHILVETEDEVVTLYREIHESKHIELKFIRFARTHSQCSLSDRNGDIGYVKQGQMG 81 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 P+ +L + + +T + + G + I ++ D + Sbjct: 82 PELNAILFEKELHTVHKVYSPLGWHLLYIIERIDAEALREREQQ 125 >gi|309378619|emb|CBX22797.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 512 Score = 45.4 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 29/309 (9%), Positives = 81/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I++ ++ + + Sbjct: 1 MFHSIEKYKTPAQVLLGLIALTFVGFGVSTVSHPGADYIVRVGDEKISEQSLNAAVQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 Q L+ KQ + GI+ S + V + + L Sbjct: 61 A-DGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDAGGKFDHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ + + + ++N + + + + + Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLV--NLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKVSEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 ++ + + N P KA + + K + Sbjct: 238 AYEERVARLPANEAKP-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|299783438|gb|ADJ41436.1| Peptidylprolyl isomerase [Lactobacillus fermentum CECT 5716] Length = 330 Score = 45.4 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 26/282 (9%), Positives = 73/282 (25%), Gaps = 32/282 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 + ++ A ++ T +G IT+ + + K +Q++I+ Sbjct: 7 LAIIAGLALALPLAACGNKAVATTSGGKITESEYYSSMK-------QTSNGKQVLQQMIL 59 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + +++ T + N+ + + ++ + K Q Sbjct: 60 DKVLEKQYGSKVSTSEVNSEYNAYKKEYGSSFSTVLSEEGLTAK----------SFKQQI 109 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 ++K + +K + ++ + Sbjct: 110 RSNLLLKAAVRNYSTFSSSALKKQWKKYEPKVQTAEIL----------VGSKETAQSIID 159 Query: 203 KDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYL--LESDLHPQFQNLLKK-SQNNTT 258 S +L + + ++ + G ++ L ++ T Sbjct: 160 TLNNTSGSKLKEFKKLAKSKSTDTTTKSNGGVLSAFDNTDTSLPSAYRKAAFALKTGEYT 219 Query: 259 -NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 P T G I + G + + L Q + Sbjct: 220 TEPVKTDNGYYVIYMIKHPAKGKYSSHISDLKDQIVTQNLNN 261 >gi|195953257|ref|YP_002121547.1| hypothetical protein HY04AAS1_0882 [Hydrogenobaculum sp. Y04AAS1] gi|195932869|gb|ACG57569.1| conserved hypothetical protein [Hydrogenobaculum sp. Y04AAS1] Length = 436 Score = 45.4 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 35/315 (11%), Positives = 80/315 (25%), Gaps = 22/315 (6%) Query: 16 LTTYFVLIIFCIVPIVSYKSWA---MSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 + + V F + + + S NG+ I+ D +R+A+ Q++ L Sbjct: 14 ILSGIVTAAFFLWNFAAGNITSLFHSSENCIAKANGDCISIADF-RRVAMGTNQQMTPIL 72 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ + LI + L ++ +K G V Q +F + Sbjct: 73 KQEILNSLIDDDLLYEQAKKEGFLVSDKEVADIISQDPSFQVDGKFNFDRYKAVLAEAGY 132 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + Y I + + L N I + + + Sbjct: 133 TPETY--ESYIKKQLTIQKYTLFVTNASYVSDIELNAANMINNTLLSGKAYIIDPNSVNI 190 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY-LLESDLHPQFQNLLK 251 Q+ + + + + L + P F+ + Sbjct: 191 NYTPTEQEIEDYYNKHKDEFKIVNPSSIIYWETTDKNKAREIYMALKSGKIPPGFKAFDE 250 Query: 252 KSQNNTTNPYV-------------TQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTK 296 K+ + T V + ++ K + K Sbjct: 251 KTMSKTFGAVVKALNPQNPVLVGNVGNNIYIFTYQSTKNAAIMPLSQAKNQVIQDLIMEK 310 Query: 297 IEKHEAEYVKKLRSN 311 ++ K + +N Sbjct: 311 KILALKDFAKNIYNN 325 >gi|291556857|emb|CBL33974.1| PPIC-type PPIASE domain [Eubacterium siraeum V10Sc8a] Length = 472 Score = 45.4 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 22/276 (7%), Positives = 77/276 (27%), Gaps = 22/276 (7%) Query: 47 NGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 N E I + + + + + + Q+ + D + Sbjct: 171 NDEKILEKEKELFNEYIAGFGLTEDTF-----LMWQTNTAIQKKVNDYLLKDITVSDSEI 225 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + A+ D+ +K+ + +K + + EI A Sbjct: 226 DDYITKLKAEAKQAYEKSASSYATDSEYKKVWIPE--DARYIKYIAVGIASSDYAEINAA 283 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + + R + +K +++ +++++S Sbjct: 284 RNESGADDAEIDKKR---------DEKLAEIKEKADAALKKATADGADFDAVVKEYSSAY 334 Query: 227 HDVSIGK--AQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIA-ICDKRDLGGE 281 + + G+ + + + + + + + T G + + D + + Sbjct: 335 SESTAGEQILVLNSKGLISDALYDAVFALEKPGDISGLIPTDSGYYIVKYVSDAKVTDSD 394 Query: 282 IAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ + + + ++ + +++ RS Y Sbjct: 395 LSNYRKTVRQELLTSRQSEKTNAILEEWRSAVNYEY 430 >gi|254712136|ref|ZP_05173947.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella ceti M644/93/1] gi|261319794|ref|ZP_05958991.1| peptidyl-prolyl cis-trans isomerase [Brucella ceti M644/93/1] gi|261292484|gb|EEX95980.1| peptidyl-prolyl cis-trans isomerase [Brucella ceti M644/93/1] Length = 226 Score = 45.4 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 19/207 (9%), Positives = 50/207 (24%), Gaps = 34/207 (16%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++NG I + DI + L A + E L ++ Sbjct: 51 AVSVNGVTIDEADILTEAQNHPAENPGAALFSAARALAVRELLLQRAR------------ 98 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 ++ + D + ++ V++ + + E Sbjct: 99 ------------------EIGIEPEHEKDAEGRAETDEDALVRMVIEREVDV-PSASRDE 139 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220 + ++ ++ I + + R + + + Sbjct: 140 AQRYYENNRHRFTSAPILEASHILIAADPADQETRDAARQTATRLAAAVIAEPATFASVA 199 Query: 221 -KFASKIHDVSIGKAQYLLESDLHPQF 246 +++S G L P+F Sbjct: 200 LEYSSCPSGAQGGNLGQLTRGSTVPEF 226 >gi|171463490|ref|YP_001797603.1| hypothetical protein Pnec_0772 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193028|gb|ACB43989.1| hypothetical protein Pnec_0772 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 137 Score = 45.4 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 37/103 (35%), Gaps = 14/103 (13%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRI------------RTTINGEVITDGDISKRIALLK 64 F+ + + + + S++ T+NG IT G ++ + L Sbjct: 4 KQLFIFALCVLAGLAHLSVASAQSKVDSKTDPKSDYEFVATVNGSPITQGLLNLNVRALT 63 Query: 65 LQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 Q EL + ++LI + L QE K G + + + Sbjct: 64 NQGQKDTPELRQAIKEDLINKELIAQEATKLGYAKEIDFPDQI 106 >gi|194864564|ref|XP_001971001.1| GG14671 [Drosophila erecta] gi|190652784|gb|EDV50027.1| GG14671 [Drosophila erecta] Length = 381 Score = 45.4 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 13/188 (6%), Positives = 41/188 (21%), Gaps = 15/188 (7%) Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 +S + D + + + ++ + Sbjct: 77 WEERIAANTKESYFYDTISRKVYFTLPPSDHREAERDAWNGSPRCTLRCRHILVKHNESD 136 Query: 191 ----------KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 + + K ++ + + + G L + Sbjct: 137 RCSSYREPVVNRTKREALHKILQTRDLVGSGESEFAALARTISDCCSARHGGDLGPLRLT 196 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 F+ + + + + T G + + + K Q + +K Sbjct: 197 QTSFGFEENILLLNTPELSEIFQTNAGYHILW---RTPVHNRKRNKRGSLEQLINS-TKK 252 Query: 300 HEAEYVKK 307 ++KK Sbjct: 253 EPKTHLKK 260 >gi|213419168|ref|ZP_03352234.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 170 Score = 45.4 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 60/152 (39%), Gaps = 8/152 (5%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72 +L+ ++ S+ + + ++ +N V+ + D+ + +KL L Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 ++ LI++ + Q +K G+ ++ A+ ++ + S L G+ + Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYS 126 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 ++ + + I +V N+ + L E+ Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVD 158 >gi|262199092|ref|YP_003270301.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliangium ochraceum DSM 14365] gi|262082439|gb|ACY18408.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliangium ochraceum DSM 14365] Length = 650 Score = 45.4 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 13/259 (5%), Positives = 46/259 (17%), Gaps = 13/259 (5%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +R+ L + ++ + + + Sbjct: 137 DERLKAWVNGMGLSSLGQFIEEQQRELEAQNMLELIRSAAVSTPEEARARFIYENTKATL 196 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE---MEIPANKQKMKNI 173 A D V+ + + E+ + Sbjct: 197 AVVQFRPGDYIRKIVLTPADTQKYLDDNRAEVQAKYDADAALYKGRGKEVQIRQIFFARQ 256 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIG 232 + ++ V R + + + G Sbjct: 257 KPAVLRPGQEASEPAAGEEEDPALVAARQARVR--IVGGADFAAVASELSEDERTKAKGG 314 Query: 233 KAQYLLESDLH----PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + + + + + + +G I R+ + Sbjct: 315 YLGWRSQENPGLGARELADGIKELGAGEVSEVISVPRGFYVFKIEGVREGDL---SFDQV 371 Query: 289 SAQNTPTKIEKHEAEYVKK 307 + + + A+ + Sbjct: 372 ALELAEQMAVESYAKLAAQ 390 Score = 44.3 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 11/112 (9%), Positives = 33/112 (29%), Gaps = 5/112 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIV----SYKSWAMSSRIRTTINGEVITDGDI 56 M ++ + F+ + ++ F S+ S+ T++ E + + Sbjct: 1 MLEQLRQNSRSFLIWILFGIIIAAFVFTFGTQSDVSFSCTGPSADYAMTVDDEEVGIPAL 60 Query: 57 SKRIALLKLQKINGELEKI-AVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + + + A+ L+ + Q ++G + Sbjct: 61 RYGLNTIGRSGQSKAQRAQFALDGLLKREILAQASAEAGFHVSNEMAQIAIR 112 >gi|298243928|ref|ZP_06967735.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ktedonobacter racemifer DSM 44963] gi|297556982|gb|EFH90846.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ktedonobacter racemifer DSM 44963] Length = 485 Score = 45.4 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 14/246 (5%), Positives = 52/246 (21%), Gaps = 15/246 (6%) Query: 57 SKRIALLKLQKINGELEKIA---VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 + + Q L+ A +Q I + + ++ Sbjct: 174 DAQAKVKDTQTKKDTLDAQANNILQNQIPNAKQLYTQSQVANDSSDWLQQDAMIRQWEAN 233 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 + I S + + ++ + ++ Sbjct: 234 QGTNVRTQINPAPNTITQAFNAFKADTASSNGGYSQFLSSDNVSDQDIHDMITIKVRRDN 293 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIG 232 + + + + Q + A + + ++ + ++ + G Sbjct: 294 MQKYLAGQYITPAYQVQARGMTLDTQADAQKALDRLHKGDDFAKVVKDMSKDVNTNTKGG 353 Query: 233 KAQYLLESDL-----------HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 +L+ + ++ N + + I + Sbjct: 354 DFGWLVNGQYSLDYAQKVGGVVDNWLFASQRKVNELSPIISDAGAFHIVQITGIQQSRAV 413 Query: 282 IALKAY 287 + K Sbjct: 414 DSAKLQ 419 >gi|209885424|ref|YP_002289281.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oligotropha carboxidovorans OM5] gi|209873620|gb|ACI93416.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oligotropha carboxidovorans OM5] Length = 704 Score = 45.4 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 25/233 (10%), Positives = 61/233 (26%), Gaps = 19/233 (8%) Query: 1 MTSKVFTSLSD----FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD- 55 M + S+ +I L ++I F + I + T+ I+ Sbjct: 71 MLRGIRNVTSNRVGKWIMSLLFGVLIISFAVWGIADIFKGSTQ-TTLATVGNTEISMEQF 129 Query: 56 -------ISKRIALLKLQKINGE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + + ++ + L++ +Q+ I E +E + G+T + Sbjct: 130 RTAYTDKLQQISRQIRRPINANQGRAFGLDRQLLQQTIAEAALDEETRRLGLTMSDAEMI 189 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE-ME 162 G + + + + +Q + + + LE + Sbjct: 190 RTISGDPTFAGPDGKFDARRFAAAIRDNGYTEQRYVAEQRRVTLRRELVSSIVAGLEPSK 249 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 R + V D +++ R P+ Sbjct: 250 TQIEALSRFQNEQRTIDYAKIGPEQAGTIETPSQQVLDTYYDEHKAQFRAPEY 302 >gi|163781565|ref|ZP_02176565.1| hypothetical protein HG1285_01743 [Hydrogenivirga sp. 128-5-R1-1] gi|159882785|gb|EDP76289.1| hypothetical protein HG1285_01743 [Hydrogenivirga sp. 128-5-R1-1] Length = 289 Score = 45.4 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 50/128 (39%), Gaps = 5/128 (3%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 R+ +NGE I + ++ ++ ++ LI + L Q + +G+ Sbjct: 35 DRVVANVNGEPILESELKVAQMFYGVKD-----RDKLIELLIQKHLIAQFLRDNGLKVPE 89 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 V+ AR+ G S ++ L +G+ + +L ++ ++ M + Sbjct: 90 GYVDTLIEDIARSNGKSVDELYRELYSKGLSPADLRSFLEVEVASTLGLREYLMSRVEVS 149 Query: 160 EMEIPANK 167 ++EI + Sbjct: 150 DIEIEIER 157 >gi|186683556|ref|YP_001866752.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nostoc punctiforme PCC 73102] gi|186466008|gb|ACC81809.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nostoc punctiforme PCC 73102] Length = 251 Score = 45.4 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 14/164 (8%), Positives = 38/164 (23%), Gaps = 3/164 (1%) Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + D+ + + Y+ + + + Sbjct: 85 LAHQRISVEDWSEIIRISLLSQKLKEHLFGVAVDDHYINNRDSYKRVALSQILVRDLTEA 144 Query: 202 IKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQ-YLLESDLHPQFQNLLKKSQNNTTN 259 +K + R + C +++ + L L + Sbjct: 145 MKITKALRDKKDSFCALALEYSQGKQSKENGAFVGIRFLTELLPEITNAIADIDVGELVG 204 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 P TQ G + + +K ++ + +E+ A Sbjct: 205 PIQTQLGYHILRV-EKWFPSDLSEIREQILEFLFINWLEERTAS 247 >gi|332291258|ref|YP_004429867.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Krokinobacter diaphorus 4H-3-7-5] gi|332169344|gb|AEE18599.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Krokinobacter diaphorus 4H-3-7-5] Length = 713 Score = 45.4 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 13/132 (9%), Positives = 35/132 (26%), Gaps = 1/132 (0%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + + + K ++F+S Sbjct: 351 KSRHILIDFKGAVTNTQRGPVPSSATRTKEEAKNLADSLLSVIKRNSGKFEELAKEFSSD 410 Query: 226 IHD-VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 + + G Y + +++ + ++ + T G I I D+++L I + Sbjct: 411 KSNSENGGDLDYQNPNLFAEGYRDFIVDNKTGSVGIAETNFGYHVIEITDQKNLQDVIKV 470 Query: 285 KAYLSAQNTPTK 296 + K Sbjct: 471 ATVVKEIVPSDK 482 Score = 43.5 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 24/251 (9%), Positives = 64/251 (25%), Gaps = 6/251 (2%) Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE--DFSSFLDKQ 127 ++ +Q++I +EI S T S + A G E + + + Sbjct: 457 EITDQKNLQDVIKVATVVKEIVPSDKTISSIYNTTQKFELAAQDGDFQEVATENGYTVRP 516 Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187 + L + +V+ F + +++ V + Sbjct: 517 VQRIRAMDENLPGEGAQRSIVQWAFEEEVSVGDIKRFPVNNGYIVAQVTRRTPKGTERVE 576 Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA---SKIHDVSIGKAQYLLESDLHP 244 + + + +L + + +S+ + Sbjct: 577 DVSTQVTPILRNMKKAAIIKDKLSGATLAEMAQSQSQTVKTASAISMNAPTIAGAGNEPK 636 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + ++P +GV + + + A + Q ++ Sbjct: 637 VVGAAFGLKEGEISDPIEGSRGVYVVQVTKITEAPALE-NYASFATQEAQKARVAVSSKV 695 Query: 305 VKKLRSNAIIH 315 + L+ A I Sbjct: 696 LNALKEAAEIE 706 >gi|209542341|ref|YP_002274570.1| peptidyl-prolyl cis-trans isomerase D [Gluconacetobacter diazotrophicus PAl 5] gi|209530018|gb|ACI49955.1| peptidyl-prolyl cis-trans isomerase D [Gluconacetobacter diazotrophicus PAl 5] Length = 643 Score = 45.4 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 20/172 (11%), Positives = 48/172 (27%), Gaps = 18/172 (10%) Query: 1 MTSKVFTS-LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR--IRTTINGEVIT----D 53 M S + + + ++ + + + F + S S R + + + IT Sbjct: 1 MISFLRHAFVDSWLGRIIAGLLFLAFVGWGVGDVLSNIGSERADVVARVGDQTITTDSFL 60 Query: 54 GDISKRIALLKLQKINGELEKI-----------AVQELIVETLKKQEIEKSGITFDSNTV 102 + + L Q G+ +I +Q L+ ++ + G+T + + Sbjct: 61 SAVQNELQQLARQMGVGDPSQIPAAARGQAAQQVLQRLVTQSEMILAAGRLGVTVPDDVL 120 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 G + D + + L V+ Sbjct: 121 RDEVFGLQIFKGPDGRFDRALFDSRLRQIGMTEARLLDIVRTDLAVRALVEP 172 >gi|162147717|ref|YP_001602178.1| peptidyl-prolyl cis-trans isomerase D [Gluconacetobacter diazotrophicus PAl 5] gi|161786294|emb|CAP55876.1| Peptidyl-prolyl cis-trans isomerase D [Gluconacetobacter diazotrophicus PAl 5] Length = 643 Score = 45.4 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 20/172 (11%), Positives = 48/172 (27%), Gaps = 18/172 (10%) Query: 1 MTSKVFTS-LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR--IRTTINGEVIT----D 53 M S + + + ++ + + + F + S S R + + + IT Sbjct: 1 MISFLRHAFVDSWLGRIIAGLLFLAFVGWGVGDVLSNIGSERADVVARVGDQTITTDSFL 60 Query: 54 GDISKRIALLKLQKINGELEKI-----------AVQELIVETLKKQEIEKSGITFDSNTV 102 + + L Q G+ +I +Q L+ ++ + G+T + + Sbjct: 61 SAVQNELQQLARQMGVGDPSQIPAAARGQAAQQVLQRLVTQSEMILAAGRLGVTVPDDVL 120 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 G + D + + L V+ Sbjct: 121 RDEVFGLQIFKGPDGRFDRALFDSRLRQIGMTEARLLDIVRTDLAVRALVEP 172 >gi|284052749|ref|ZP_06382959.1| hypothetical protein AplaP_14868 [Arthrospira platensis str. Paraca] gi|291566013|dbj|BAI88285.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 246 Score = 45.4 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 85/266 (31%), Gaps = 34/266 (12%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 IT DI K++ L ++ +I + ++GI ++ + Sbjct: 7 ITAEDILKQVKLSIQIPD-------LIESIISRKIITDAATEAGIKVETEELQKAADTMR 59 Query: 111 R-NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 SA++ ++L+K + + ++ + I +V + F K Sbjct: 60 SLQNLHSAQETFAWLEKHHLSVDDLEEVAYMSIISQKLVAHLFADKV-------EPYFYD 112 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + + VL ++ + +E + +K + Sbjct: 113 NQLDYAGVVMYEVVL--------DDEDLAMELFYAIQEGEMSFYDVAHKYIQDVE--LRR 162 Query: 230 SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 G L DL P+ + + P VT KGV I + D ++A L Sbjct: 163 QGGYRGVLSRKDLQPEVSAAVFAATPPQLVKPIVTSKGVHLILVEDI--------IQAEL 214 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAII 314 + + +E+VKK +A I Sbjct: 215 DNKLRFQIVSDLFSEWVKKKVDSADI 240 >gi|225850233|ref|YP_002730467.1| hypothetical protein PERMA_0679 [Persephonella marina EX-H1] gi|225646664|gb|ACO04850.1| hypothetical protein PERMA_0679 [Persephonella marina EX-H1] Length = 461 Score = 45.4 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 39/352 (11%), Positives = 102/352 (28%), Gaps = 40/352 (11%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M +K+ S L T F + V IV YK + +NG I+ + ++ Sbjct: 1 MFAKIAESKWMKFVLFITTFAFVGTAFVAIVIYKFAGNITG-AAVVNGREISLQEFYYQV 59 Query: 61 ALLKLQKING---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 +++ + N E+ A++ +I L QE EK GI V + Sbjct: 60 NVIQNRLENQGVDTAPLKKEIYDQALEAVIDRELLYQEAEKEGIAATKEEVKRAILDVEA 119 Query: 112 NTGLSAEDFSSFLD--KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 ++ + + + + + + + EI + K Sbjct: 120 FKEDGRFSKDRYIALLSGMNISPQLFEEIVRKDLSAQHLFTFLDASFYLSDEEINSYVYK 179 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + ++L + + + + + + + + ++K + + Sbjct: 180 QLSKLSGDFLYIKPQPLKISEEEAKRYYEKHKSEYTGKEGKEVIIYRIDIDKNNQEKSEK 239 Query: 230 SIGKAQ--------YLLESDLHPQFQNLLKKSQNNTTNP-------------------YV 262 + D+ F++++ ++ +N Sbjct: 240 LAKDLFLRLKKGETEIKNEDIKIIFKDVIYDDTDSISNIPEELKKKLKEISPDKNIIFVK 299 Query: 263 TQKGVEYIA-ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313 T I ++ +K + ++ ++ E +K+ + Sbjct: 300 TDDAYYLSRFIRAVKEPLPYEKVKDEIYSKLKEDYEKRAVKELYEKISKESD 351 Score = 36.6 bits (82), Expect = 5.2, Method: Composition-based stats. Identities = 29/270 (10%), Positives = 76/270 (28%), Gaps = 18/270 (6%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 I++ + + K + E +++ + + +I+K+ F++ Sbjct: 197 KISEEEAKRYYEKHKSEYTGKEGKEVIIYRI--------DIDKNNQEKSEKLAKDLFLRL 248 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + + + K I D+ + + + + ++ + + Sbjct: 249 KKGETEIKNEDIKIIFKDVIYDDTDSISNIPEELKKKLKEISPDKNIIFVKTDDAYYLSR 308 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA---SKI 226 V I ++ + + S+ + ++K+ KI Sbjct: 309 FIRAVKEPLPYEKVKDEIYSKLKEDYEKRAVKELYEKISKESDKGIQSLMKKYDGKLEKI 368 Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--AL 284 D ++ + + +K + + G+ I E L Sbjct: 369 KDETVRDLI-VRYGLTPEYMKLFIKDREG----IIPLKDGILVYKIDKVTPPTDEESGEL 423 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + K Y+ KLR +A I Sbjct: 424 KKLVEPLLKNEKYNTLVQMYIDKLRKDAEI 453 >gi|226199062|ref|ZP_03794624.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei Pakistan 9] gi|225928837|gb|EEH24862.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei Pakistan 9] Length = 71 Score = 45.4 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 17/54 (31%), Gaps = 2/54 (3%) Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + P G + + DKRD+ + Q ++ +LR Sbjct: 13 GFSMPIRGSNGYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 64 >gi|160871799|ref|ZP_02061931.1| putative peptidyl prolyl cis-trans isomerase D [Rickettsiella grylli] gi|159120598|gb|EDP45936.1| putative peptidyl prolyl cis-trans isomerase D [Rickettsiella grylli] Length = 484 Score = 45.4 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 29/241 (12%), Positives = 69/241 (28%), Gaps = 20/241 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSW--AMSSRIRTTINGEVITDGDISK 58 M + +I ++IIF + I Y + + +++I I G+++ D K Sbjct: 1 MLQSIRDKSQGWITNTVIGLLIIIFALWGIHGYVVFHESGNNKIVAKIAGQLLRQSDFEK 60 Query: 59 RIALLKLQKIN-------------GELEKIAVQELIVETLKKQEIEKSGITFDS---NTV 102 Q + L++ V+E + + +S ++ Sbjct: 61 IYQRAYQQNRDYLNQSFSHDKKKVEALKEQVVREWEITQVLVYAALQSKYRISQTLIDSF 120 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 S E F S L F + + + V + L + Sbjct: 121 LLQVPAFQSAGQFSIEKFYSVLRANDYTKLEFLEEIKKMLLINQVQQG-ITQSAFVLPQD 179 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + YLI + + + ++ ++ + + + + Sbjct: 180 IRNYIEYNHQKRDFSYLIVPYSMFLNQQNIPDSRIFA-YYQENKQLFRQPEQVSIEYVQL 238 Query: 223 A 223 + Sbjct: 239 S 239 >gi|148262337|ref|YP_001229043.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter uraniireducens Rf4] gi|146395837|gb|ABQ24470.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter uraniireducens Rf4] Length = 93 Score = 45.4 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 8/82 (9%), Positives = 22/82 (26%), Gaps = 1/82 (1%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255 ++ +D ++ + +S G + +F + Sbjct: 12 ASKEVCEDLKKQIEAGADFAAVAREHSSCPSGKQGGGLGEFGPGQMVKEFDQAVFTGEVG 71 Query: 256 NTTNPYVTQKGVEYIAICDKRD 277 P TQ G + + + + Sbjct: 72 KVLGPIQTQFGYHLLEVTSRTE 93 >gi|261365094|ref|ZP_05977977.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria mucosa ATCC 25996] gi|288566520|gb|EFC88080.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria mucosa ATCC 25996] Length = 511 Score = 45.1 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 64/223 (28%), Gaps = 5/223 (2%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F ++ + LI + + S + E I+D ++ + + Sbjct: 1 MFHTVEKYKTPAQILLGLIALTFIGFGVETARNSGSDYIVKVGSEKISDHTLNNAVQAEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV----QHARNTGLSAEDF 120 G+ + L+ K+ + GI + V V H N S F Sbjct: 61 A-AGGGQSREAIFSGLVQRAYLKEGAKMMGIDVSMDQVKQAIVDDPAFHDANGKFSQALF 119 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + +L ++ + ++ F L Q +++ + K N T+R + Sbjct: 120 TQYLSQRHMSEDQFIDDLREQFALQNLINLVQNGAIISDSQAEQLIKLTQSNRTIRSFTF 179 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 R F+ + + K A Sbjct: 180 RPETFAAQVKTDDATLQRYYESHKKDYLIPQAVKLEYVALNAA 222 >gi|309390238|gb|ADO78118.1| SurA domain protein [Halanaerobium praevalens DSM 2228] Length = 241 Score = 45.1 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 81/232 (34%), Gaps = 33/232 (14%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS-----RIRTTINGEVITDGDISKRIALLKLQK 67 +K F+L+ +VP+ + S ++ +NGE IT ++++ L ++ + Sbjct: 1 MKKFLVSFLLLTVLMVPMNVFAQDVDSDSKQEPKVVAVVNGEEITAQELAQNAKLNQILR 60 Query: 68 INGELEKIA---------------------VQELIVETLKKQEIEKSGITFDSNTVNYFF 106 ++++ + LI TL KQ ++ S I ++ + Sbjct: 61 QLSQVDQQLVKLLTNSEAGNKVLADLRKAKLDSLIDNTLLKQAVKDSDINLSQEEIDEIY 120 Query: 107 VQHA----RNTGLSAEDFSSFLDKQGIGD---NHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 + + + + F S L KQG + + Q +++ + + Sbjct: 121 NKQKSSILKQNKMDEKQFLSVLKKQGFENEAAYKNEFANNPQIKINKLIEKEVVDNIEVS 180 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 E EI ++ K+ + + P + + Q + +LR Sbjct: 181 EKEIKEAYEQNKDAFAQTGQDVSYEQIKPRLEQMLKQQKQNQAIKEYLEKLR 232 >gi|315149423|gb|EFT93439.1| putative foldase protein PrsA [Enterococcus faecalis TX0012] Length = 341 Score = 45.1 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 23/292 (7%), Positives = 68/292 (23%), Gaps = 36/292 (12%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + + S + + S+ T+ G IT D +I + Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A ++++ + +++ + + + E + Sbjct: 54 AFSQMVIYKVFEEKYGD-------KVTDKAIQKKFDDAKKQVEAQGGKFSDALTQAGLTE 106 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + ++ + ++ Sbjct: 107 KSFKKQLKQTEAMQVGLKNHLKITDEDLKTAWASFHPE------------VEAQIIQVAS 154 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254 K +K K A+ GK ++ +S + + + K Sbjct: 155 EDDAKAVKKEITDGGDFTKIAKDKSTDAT--TKKDGGKIKFDSQSTIPTEVKEAAFKLKD 212 Query: 255 NNTTNPYVTQKG------VEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEK 299 + P + + + G + + + K+ Sbjct: 213 GEVSEPIAATNAQTYQTTYYVVKMTKNKAKGNDMKPYEKEIKKIAEKEKLSD 264 >gi|301091484|ref|XP_002895926.1| PpiC-type peptidyl-prolyl cis-trans isomerase, putative [Phytophthora infestans T30-4] gi|262096055|gb|EEY54107.1| PpiC-type peptidyl-prolyl cis-trans isomerase, putative [Phytophthora infestans T30-4] Length = 114 Score = 45.1 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 6/96 (6%), Positives = 24/96 (25%) Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + ++ ++ + + + E+ K ++ + Sbjct: 15 CCIASVAGQDAAPVAIQAHASHILVDTEAEADDLSVQLGEASNLFLKFAQLAKEHSKCPS 74 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263 G + P+F + + + + T Sbjct: 75 SRKGGDLGTFDRGQMVPEFDKVAFEGEIGVVHKVKT 110 >gi|325685772|gb|EGD27846.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 313 Score = 45.1 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 32/310 (10%), Positives = 78/310 (25%), Gaps = 33/310 (10%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70 +F+K ++ +S + + SS G IT + + + Sbjct: 5 NFMKKHLKKIAVLAGAAAIGLSTAACSSSSATVVNYKGGKITQDEYYEAMKDTSA----- 59 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + + LI+ K + + N + + + + +S Sbjct: 60 --GQSTLVSLIIYRTLKAQYGDKVSSKKINAEYNKYKKQYGSNFSTVLSYSGLT------ 111 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + + + T + Sbjct: 112 ----TKSFKQNLATNLYSVAALKDLKKPTTTQEKNWWKSYHTKTT------VQHIVVDKK 161 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250 + + + + + +K A K+ + L F++ + Sbjct: 162 STAETVIKKLKSGTSFATLAKKYSTDTATKKKAGKLAAFDSTD------TSLSSTFKSAV 215 Query: 251 KKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT--KIEKHEAEYVK 306 K + TT P T G E I + + G K+++ Q + + Sbjct: 216 WKLKEGEYTTTPVKTSSGYEVIKVLKTTEKGSYTKNKSFIDKQLYAKWAADSNTMTKIIS 275 Query: 307 KLRSNAIIHY 316 K+ A ++ Sbjct: 276 KVLKKANVNI 285 >gi|218247468|ref|YP_002372839.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cyanothece sp. PCC 8801] gi|257061196|ref|YP_003139084.1| hypothetical protein Cyan8802_3421 [Cyanothece sp. PCC 8802] gi|218167946|gb|ACK66683.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cyanothece sp. PCC 8801] gi|256591362|gb|ACV02249.1| hypothetical protein Cyan8802_3421 [Cyanothece sp. PCC 8802] Length = 243 Score = 45.1 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 32/256 (12%), Positives = 79/256 (30%), Gaps = 26/256 (10%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 ITD +I K++ L ++ +I + +E GI ++ + Q Sbjct: 6 AITDEEILKQVKLSGKI-------PEIIEGIINRQIITEEATNLGIKVETEELQQAADQF 58 Query: 110 A-RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 SA D +L+K + + F++ L + + + F +I A Sbjct: 59 RLSKNLHSANDTHQWLEKNQLSVDDFEEMLYCTILSGKLANHLFN-------DQIEAYFY 111 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + + +L + ++ + + + + Sbjct: 112 QNQLNYAEVVMYEVILDNEDLAMELYYAIDEEEMSFWDVAHHYIQDQEL----------R 161 Query: 229 VSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 G + + DL P+ + + P +T +GV + + + + Sbjct: 162 RKGGYLETVKRQDLKPEISAAVFAATPPELLKPIMTSQGVHLVFVEEIIQPVLNEKKRYQ 221 Query: 288 LSAQNTPTKIEKHEAE 303 + A +++ E Sbjct: 222 ILADLFSQWVKQKSEE 237 >gi|260807929|ref|XP_002598760.1| hypothetical protein BRAFLDRAFT_212895 [Branchiostoma floridae] gi|229284035|gb|EEN54772.1| hypothetical protein BRAFLDRAFT_212895 [Branchiostoma floridae] Length = 56 Score = 45.1 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 7/52 (13%) Query: 232 GKAQYLLESDLHPQFQNLLKKSQNNTT-------NPYVTQKGVEYIAICDKR 276 G ++ + FQ+ Q +TT P T+ G I I K+ Sbjct: 4 GDLGWMTRGSMVGPFQDAAFALQPSTTQKPVYTNPPIRTKHGYHVIMIEGKK 55 >gi|85374123|ref|YP_458185.1| peptidyl-prolyl isomerase [Erythrobacter litoralis HTCC2594] gi|84787206|gb|ABC63388.1| peptidyl-prolyl isomerase [Erythrobacter litoralis HTCC2594] Length = 647 Score = 45.1 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 21/259 (8%), Positives = 61/259 (23%), Gaps = 8/259 (3%) Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 R A+ + + + LI + + + I + + R ++ Sbjct: 143 RAAIARQGLTDAVVRDDLGDGLIAQQVLVPGSFGATIPDKLASRYAALFKERRRGAIALI 202 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 +SF D + Y + + E + Y Sbjct: 203 PSTSFAPDGEPTDAQVQAYYNANKGDYIRPERRVIRYATFGESAVADVGTPTAAEIANRY 262 Query: 179 LIRTVLFSIPDNKLQNQGFV--QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 ++ + + Q V Q+ + + + + + IG Sbjct: 263 EQDASRYAASEERTLTQLIVPTQQAAQTFRDRVAGGASLETVARE--AGLEAQQIGPIDR 320 Query: 237 LLESDLHPQFQNLLKK--SQNNTTNPYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQN 292 ++ + G + + D + + + + + Sbjct: 321 SEYGAQASAQVAQAVFGTARGQVAPVARSGLGWHVVRVDDVNRIEGRSLAQAREEIVSTL 380 Query: 293 TPTKIEKHEAEYVKKLRSN 311 T + + E + + Sbjct: 381 TQERRRRAFNELAESIEDR 399 >gi|23097538|ref|NP_691004.1| protein secretion protein [Oceanobacillus iheyensis HTE831] gi|22775761|dbj|BAC12039.1| protein secretion (post-translocation molecular chaperone) [Oceanobacillus iheyensis HTE831] Length = 303 Score = 45.1 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 28/283 (9%), Positives = 76/283 (26%), Gaps = 35/283 (12%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 + T+ GE I+ + + ++ QK ++++I + + E+ GI Sbjct: 45 NEAVATVAGEEISYDEWMTGLRNMQGQKH--------LKQMIDKEVVNTLAEQEGIEVSE 96 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 ++ G+ ED + +++ + ++ ++ Sbjct: 97 KIIDREVSFLYTMQGILTEDDAVEEEERWREEIKYRYQ----------LEQLLTKNIEIP 146 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 E E+ + N ++ + D + Q + Sbjct: 147 EEELRSYYDTYGNQYDFSSSVKLSHILVEDMETAEQV---------YQELEDGASFRLLA 197 Query: 220 EKFA-SKIHDVSIGKAQYLLESD---LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 +++ + G + S L + + P+ + GV + + K Sbjct: 198 REYSIDDETRQNGGYMGSIYTSSQFLLDSYETQAANMENHTYSEPFQAENGVAIMYLHRK 257 Query: 276 RDLGGEIALKAYLSAQNTPT--KIEKHEAEYVKKLRSNAIIHY 316 + E+ +L I + Sbjct: 258 LPAIKFT--YDEVQPYVHSEVAMHEEGLTLEADQLWEEVDIEW 298 >gi|307289621|ref|ZP_07569565.1| putative foldase protein PrsA [Enterococcus faecalis TX0109] gi|306499435|gb|EFM68808.1| putative foldase protein PrsA [Enterococcus faecalis TX0109] gi|315164537|gb|EFU08554.1| putative foldase protein PrsA [Enterococcus faecalis TX1302] Length = 362 Score = 45.1 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 26/315 (8%), Positives = 79/315 (25%), Gaps = 41/315 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K + +L + + S + + S+ T+ G IT D +I Sbjct: 19 KRMKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTS 71 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A ++++ + +++ + + + E Sbjct: 72 QQAFSQMVIYKVFEEKYGD-------KVTDKAIQKKFDDAKKQVEAQGGKFSDALTQAGL 124 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 ++ Q + ++ + ++ + + Sbjct: 125 TEKSFKKQLKQAEAMQVGLKDHLKITDEDLKTAWASFHPEVEAQII-------------- 170 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQF--QNLL 250 Q + K ++ + + GK ++ +S P + Sbjct: 171 -QVASEDDAKAVKKEITDGGDFAKIAKDKSTDAATKKDGGKIKFDSQSTTVPAEVKEAAF 229 Query: 251 KKSQNNTTNPYVTQKG------VEYIAICDKRDLGGE-IALKAYLSAQNTPTKI--EKHE 301 K + P + + + G + + + TK+ + + Sbjct: 230 KLKDGEVSEPIAATNAQTYQTTYYVVKMTKNKAKGNDMKPYEKEIKKIAEDTKLADQTFQ 289 Query: 302 AEYVKKLRSNAIIHY 316 A+ + A + Sbjct: 290 AKVISDELKAANVKI 304 >gi|315173979|gb|EFU17996.1| putative foldase protein PrsA [Enterococcus faecalis TX1346] Length = 362 Score = 45.1 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 26/315 (8%), Positives = 79/315 (25%), Gaps = 41/315 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K + +L + + S + + S+ T+ G IT D +I Sbjct: 19 KRMKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTS 71 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A ++++ + +++ + + + E Sbjct: 72 QQAFSQMVIYKVFEEKYGD-------KVTDKAIQKKFDDAKKQVEAQGGKFSDALTQAGL 124 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 ++ Q + ++ + ++ + + Sbjct: 125 TEKSFKKQLKQAEAMQVGLKDHLKITDEDLKTAWASFHPEVEAQII-------------- 170 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQF--QNLL 250 Q + K ++ + + GK ++ +S P + Sbjct: 171 -QVASEDDAKAVKKEITDGGDFAKIAKDKSTDAATKKDGGKIKFDSQSTTVPAEVKEAAF 229 Query: 251 KKSQNNTTNPYVTQKG------VEYIAICDKRDLGGE-IALKAYLSAQNTPTKI--EKHE 301 K + P + + + G + + + TK+ + + Sbjct: 230 KLKDGEVSEPIAATNAQTYQTTYYVVKMTKNKAKGNDMKPYEKEIKKIAEDTKLADQTFQ 289 Query: 302 AEYVKKLRSNAIIHY 316 A+ + A + Sbjct: 290 AKVISDELKAANVKI 304 >gi|116495203|ref|YP_806937.1| parvulin-like peptidyl-prolyl isomerase [Lactobacillus casei ATCC 334] gi|191638713|ref|YP_001987879.1| Protein maturation protease (Peptidylprolyl isomerase) [Lactobacillus casei BL23] gi|227534778|ref|ZP_03964827.1| peptidylprolyl isomerase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239632085|ref|ZP_04675116.1| protein maturation protease [Lactobacillus paracasei subsp. paracasei 8700:2] gi|116105353|gb|ABJ70495.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus casei ATCC 334] gi|190713015|emb|CAQ67021.1| Protein maturation protease (Peptidylprolyl isomerase) [Lactobacillus casei BL23] gi|227187534|gb|EEI67601.1| peptidylprolyl isomerase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526550|gb|EEQ65551.1| protein maturation protease [Lactobacillus paracasei subsp. paracasei 8700:2] gi|327382753|gb|AEA54229.1| Peptidyl-prolyl cis-trans isomerase [Lactobacillus casei LC2W] gi|327385940|gb|AEA57414.1| Peptidyl-prolyl cis-trans isomerase [Lactobacillus casei BD-II] Length = 300 Score = 45.1 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 32/283 (11%), Positives = 73/283 (25%), Gaps = 36/283 (12%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + + ++ V + SS + G +T + + + Sbjct: 1 MKKWILGVVGLFVAV---TLAGCSSSTVANMKGAKVTKDEYYDAMK-------KTTTGQA 50 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 ++ +IV +Q+ N+ + ++ + + + + + Sbjct: 51 TLRNMIVLKALEQQYPNKVSDKKVNSQFNTLKKQYGSSFDTTLEQNGYTESSFKDQIRTT 110 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + ++ LK E Q K V + + Sbjct: 111 ------------LYSEVALKALKKPTEKQIAAQWKKYQPKITVQHILV---------KTE 149 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL--LESDLHPQFQNLLKK- 252 ++ I D ++ + + GK ++ L F+ K Sbjct: 150 DEAKQIISDYQKDPTEKNFEALAKKNSIDTGTKDKGGKLTAFDNTDTSLDSTFKKAAFKL 209 Query: 253 -SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293 + T P TQ G I + G K L Q Sbjct: 210 TKAGDITTTPVKTQYGYHVIRVISVGKKGTMKEHKKDLENQLY 252 >gi|315641846|ref|ZP_07896850.1| peptidyl-prolyl cis-trans isomerase [Enterococcus italicus DSM 15952] gi|315482521|gb|EFU73060.1| peptidyl-prolyl cis-trans isomerase [Enterococcus italicus DSM 15952] Length = 341 Score = 45.1 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 36/300 (12%), Positives = 67/300 (22%), Gaps = 39/300 (13%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + + + + + + S T+ G IT D L + Sbjct: 1 MGVLKNMKKKLILATLGLFSVMTLAACSSSSDETIATMKGNKITVSDFYAEAKLTSANQQ 60 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + + +K G V+ + Q A+ G S E Q Sbjct: 61 LAR----------NMIIYQAFEDKYGDKVSQKQVDKQYNQTAKQYGDSFES-------QL 103 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + K ++ + + A + + + Sbjct: 104 ESAGYTKDSYKKAIKQQLAMEAGLKAHVKLTDADYKAAWESFHPEVEAQIIQVAS----- 158 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ--F 246 + + E S+ EK GK + S P Sbjct: 159 --------EDEAKEVKTEASKDGADFAKIAKEKSTDSTTKEDGGKVTFDSTSTTIPAEVQ 210 Query: 247 QNLLKKSQNNTTNPYVTQK------GVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK 299 K ++P I + G ++ K L T TKI Sbjct: 211 AAAWKLKDGEISDPIAVTNSSTYTQSYYIIKMVKTSSKGNDMNKYKKTLKTIATNTKIND 270 >gi|118581468|ref|YP_902718.1| hypothetical protein Ppro_3065 [Pelobacter propionicus DSM 2379] gi|118504178|gb|ABL00661.1| conserved hypothetical protein [Pelobacter propionicus DSM 2379] Length = 527 Score = 45.1 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 2/153 (1%) Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 K++ + + + + + V AE++ +L + S Sbjct: 368 YIVKVRQRIPSQVRPLNEIKAQVEQSFKAAKAVDLARGKAEQAARQLAAKKPLSSQSTSS 427 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIA 283 + G + + + L + T P+ I + + + Sbjct: 428 FGFSAKGDVPSIGNAPDLMEAAFRLTSASPAATAPFKVGDRWYAIRLKSRSEAPRAEFDR 487 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + P K ++ +VK+LR A I Sbjct: 488 TKTAIKQGMLPVKQQEALTTWVKQLRGKAKIEI 520 Score = 37.7 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 29/225 (12%), Positives = 65/225 (28%), Gaps = 26/225 (11%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------- 69 F+ +F + S S + + +N I+ + ++ Sbjct: 23 LSFIGTMFLVWGKGSDGSGSSMAY-AAKVNRHKISLEEFQNAYQRMRNIYQQIYGQSLTP 81 Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTGLSAEDFS 121 L+K A+ LI L +E +K GIT + V+ ++ S + + Sbjct: 82 EIEKTLGLKKAALNSLIDTALILKEAKKMGITASKDEVSGAIAAMPMFQKDGVFSFDLYQ 141 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 L I F++ + I + + + + +++ R Sbjct: 142 QLLKSNRITAKEFEEAQQRELILKKTRQAIINKVAVSDQEALDLFRKEND---------R 192 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 L + G ++ + +E + EK Sbjct: 193 IELEYLSYGPADVMGEIRPTEAELKEFLQKNQDRFRTAEKAEISY 237 >gi|261401210|ref|ZP_05987335.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria lactamica ATCC 23970] gi|269208789|gb|EEZ75244.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria lactamica ATCC 23970] Length = 512 Score = 45.1 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 29/309 (9%), Positives = 82/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + + E I++ ++ + + Sbjct: 1 MFHSIEKYKTPAQVLLGLIALTFVGFGVSTASRPGADYIVQVGDEKISEQSLNAAVQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 Q L+ KQ + GI+ S + V + + L Sbjct: 61 A-DGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDAGGKFDHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ + + + ++N + + + + + Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLV--NLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKVSEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQAVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 ++ + + N P KA + + K + Sbjct: 238 AYEERVARLPANEAKP-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|225375916|ref|ZP_03753137.1| hypothetical protein ROSEINA2194_01552 [Roseburia inulinivorans DSM 16841] gi|225212237|gb|EEG94591.1| hypothetical protein ROSEINA2194_01552 [Roseburia inulinivorans DSM 16841] Length = 333 Score = 45.1 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 29/311 (9%), Positives = 88/311 (28%), Gaps = 25/311 (8%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 ++ K ++ + C +++ N EVI ++ R + ++ + Sbjct: 1 MNSMKKNRKKMTLICLLCFSFLLTGCKIG---------NKEVIVSNTLNNR-QVFRIGNV 50 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITF------DSNTVNYFFVQHARNTGLSAEDFSS 122 + L++ A L+ + + + + Sbjct: 51 SCGLKE-AKVYLVNYQNIYGTAYGLDLWQHDFGDSSLENYVKNITMQELAQVVCLDQLAK 109 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + + + K A + + + +++ G E +I + + + Sbjct: 110 EKEMELSEEEKEKTAQAAEEYFASLTEDE-TAYMGVSESDIKEYYEHYALAQKVYHSLTK 168 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ----YLL 238 + + + + E + + E FA+ ++ + + + Sbjct: 169 AVNEEVSDDEARVMEIMQIFVSDESRANEIASRLAQGEDFATLANNYN--ELGSIQVNIS 226 Query: 239 ESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 DL + + + + + G +I +K + A KA + + Sbjct: 227 RDDLPAAVEEIAFQMENDEVSGKITVDGGFYFIKCLNKYNQELTEANKANIVDKREKEAF 286 Query: 298 EKHEAEYVKKL 308 + +V L Sbjct: 287 DDEYNGFVSSL 297 >gi|328851900|gb|EGG01050.1| hypothetical protein MELLADRAFT_111323 [Melampsora larici-populina 98AG31] Length = 188 Score = 45.1 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 9/102 (8%), Positives = 24/102 (23%), Gaps = 1/102 (0%) Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + R + + ++ + I K + + + Sbjct: 83 KHANSRRPSSWKETQITRTQSEAIEILKEHEEILRPLNGIQLNEKFQDLAKVHSDCSSYS 142 Query: 230 SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 G + + F+ + + + T GV I Sbjct: 143 HGGDLGQFKKGQMQKSFEEVSFQLQIGELSKIVTTDSGVHLI 184 >gi|119475688|ref|ZP_01616041.1| hypothetical protein GP2143_17751 [marine gamma proteobacterium HTCC2143] gi|119451891|gb|EAW33124.1| hypothetical protein GP2143_17751 [marine gamma proteobacterium HTCC2143] Length = 300 Score = 45.1 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 23/316 (7%), Positives = 72/316 (22%), Gaps = 46/316 (14%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 L F + +L + S R ++ DI++ Q Sbjct: 6 LKFFRDPFIQFLILGSLVFTVFSVFTDGDSSDR------NITVSAMDIARLHGQWSTQYA 59 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + +I + ++++ + + + Sbjct: 60 KQPTSAQ-LDSIIDQHIREEIFYREATKLRLGEEDIIIRRRMVQ---------------- 102 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + +V+ + + E+E K + + R + +S Sbjct: 103 ----------KYMFLSESLVE---ITEPSGPELEDFYAANKQRYEIPEKLSFRHIYYSHN 149 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 + + + + + F Sbjct: 150 SVSTAQDENNDAESAANNMVQSLNASQVDTSSWRKQGDAFMLQREYAAREPMQISELFGA 209 Query: 249 LLKKSQNNTT--------NPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIE 298 + + + P + G + + ++ +++ + K Sbjct: 210 VFTQGLAGISDEDIAIWVGPIRSAYGWHAVKLLSRKPPATPLLADIRSKVVVDYIADKRR 269 Query: 299 KHEAEYVKKLRSNAII 314 + A+Y + +R+ I Sbjct: 270 QTNADYYQSVRNQYQI 285 >gi|192291606|ref|YP_001992211.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris TIE-1] gi|192285355|gb|ACF01736.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris TIE-1] Length = 629 Score = 45.1 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 32/390 (8%), Positives = 88/390 (22%), Gaps = 85/390 (21%) Query: 5 VFTSLSDFI-KLLTTYFVLIIFCIVPIVSYKSW--AMSSRIRTTINGEVITDGDISKRIA 61 + + S++I K + T + ++ + I I+ + Sbjct: 1 MRKASSNWIGKTIMTIVMGVLIVSFGVWGIADVFRGFGRSTLAKIGSTEISTEQFRQTYN 60 Query: 62 -------------LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 L Q +++ +Q+ I E ++ + G+ ++ Sbjct: 61 DRLQQIGRQFGRPLTPDQARAIGIDRQVLQQTIAEAALDEDARRLGLGQSDADTMKSILE 120 Query: 109 HARNTGLSAEDFSSFLDK---------QGIGDNHFKQYLAIQSIWP-------------- 145 G + + ++ + Q + L Q Sbjct: 121 DPNFKGANGQFDANRFQQLIRQFGFTEQRYLAEQRRVALRRQIAGSLTAGLEPPKTLMQA 180 Query: 146 --------------DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + ++ A K + + Sbjct: 181 LSQFQNEERAIDYLKLTDAQAGTIAAPSPADLTAFYDSHKAQFRAPEYRKVSFLVVTPES 240 Query: 192 LQNQGFVQ------------------KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG- 232 + V ++ + + + + K AS + Sbjct: 241 IAKWAEVSDADAQKLFEQRKDKLSTPEKRQILQIVFPSVEEAQAARAKIASGTSFADLAK 300 Query: 233 ---------KAQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + +S++ N + P Q G + + G+ Sbjct: 301 ERGVKPGDLDLGLVSQSEMLDQKVAAAAFALPLNEVSQPVQGQFGTVLLEVTKIEP--GK 358 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 A ++A ++ + V++L Sbjct: 359 QPDYASVAASLKRDLAQERARKQVQELHDK 388 >gi|67527584|ref|XP_661673.1| hypothetical protein AN4069.2 [Aspergillus nidulans FGSC A4] gi|74657276|sp|Q5B5W1|PIN4_EMENI RecName: Full=Peptidyl-prolyl cis-trans isomerase pin4; Short=PPIase pin4; AltName: Full=Parvulin-14; Short=Par14 gi|40739767|gb|EAA58957.1| hypothetical protein AN4069.2 [Aspergillus nidulans FGSC A4] gi|259481343|tpe|CBF74769.1| TPA: Peptidyl-prolyl cis-trans isomerase pin4 (PPIase pin4)(EC 5.2.1.8)(Parvulin pin4) [Source:UniProtKB/Swiss-Prot;Acc:Q5B5W1] [Aspergillus nidulans FGSC A4] Length = 128 Score = 45.1 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 27/85 (31%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K +++ G + + +L F+ + + + Sbjct: 45 EKFSKKEEALEKIRNGAKFDEVAREYSED-KARQGGSLGWKSKGELELPFEEVAFSLEQS 103 Query: 257 TTNP-----YVTQKGVEYIAICDKR 276 TT T G I + ++ Sbjct: 104 TTGNPKIGEAKTGYGYHIIMVEGRK 128 >gi|213019460|ref|ZP_03335266.1| peptidyl-prolyl cis-trans isomerse D, putative [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212994882|gb|EEB55524.1| peptidyl-prolyl cis-trans isomerse D, putative [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 578 Score = 45.1 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 23/207 (11%), Positives = 60/207 (28%), Gaps = 21/207 (10%) Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 D + LD ++F + + + + F + + E+ + + + Sbjct: 177 PEPDDQALLDLYERNKSNFYYPEYRTAQYISLDQKYFEDQIRISDEEVDSIIEHQELKNQ 236 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R+ + + + EES+ + + K V+ Sbjct: 237 RDIFNVIF---------PTKEKAEIARRALEESKASFEQIIEEFNKVKLDETRVNN---- 283 Query: 236 YLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQN 292 + + L + + + + G I + + E LK + + Sbjct: 284 -ITKDFLPENMREKVFALKTGEVSEVLTSNFGWHVIKVESIHQISDEDLVDLKKDIRSVL 342 Query: 293 TPTKIEKHEAEYVK----KLRSNAIIH 315 T K + +++ K+ + A I Sbjct: 343 TNQKSFEKVNDFINQVNYKIYNGATIE 369 >gi|196232956|ref|ZP_03131805.1| SurA domain protein [Chthoniobacter flavus Ellin428] gi|196222934|gb|EDY17455.1| SurA domain protein [Chthoniobacter flavus Ellin428] Length = 229 Score = 45.1 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 55/169 (32%), Gaps = 13/169 (7%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING----------ELEKIAVQELIVETLKKQEIEK 92 T++G I ++ K A L + + ++ + E+I++ + +K Sbjct: 50 VATVDGAEIKKDELEKAFANLLAARKMSPDAIPAEQRLQGYRMVLDEIIIDKILA---KK 106 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 S T ++ + + S + ++ G + K+ L + + + Sbjct: 107 SADTKVTDEEVNAQWERIKGNFGSEAELKKQVEAAGETLDKVKKGLHDRLAEEHWIDSQV 166 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 K + E +K +R + +K V+++ Sbjct: 167 KDKVNVTDAEAEDFYKKHPEAFKTPEEVRASHILVKVDKDAKPEVVEEK 215 >gi|39997591|ref|NP_953542.1| hypothetical protein GSU2496 [Geobacter sulfurreducens PCA] gi|39984483|gb|AAR35869.1| hypothetical protein GSU2496 [Geobacter sulfurreducens PCA] Length = 571 Score = 45.1 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 29/290 (10%), Positives = 72/290 (24%), Gaps = 31/290 (10%) Query: 32 SYKSWAMSSRIRTTINGE-VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEI 90 + + R TI GE +T D+++ I + + Sbjct: 306 GFLKFLEDKRPLATIKGEKPVTVADLAEAIRM----------------------KFYHGV 343 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 + + N + T ++ + I+ V+ Sbjct: 344 DMAIDQKKVNKAKDSLLFEILATRAIEKEGRDKGFDKKKEYLDKVTDYQESVIFGHFVEK 403 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 E E+ A + K+ ++ + D + R + Sbjct: 404 VIRPDVKVTEDELKAYYEAHKSEYSYPIMVVLDGIAFNDQNAAQSAAEKLRQGMDFKWFK 463 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV-EY 269 + + + + L ++ +Q Y G Sbjct: 464 ENAEGHVDAKAAGVLQFEDVP-----VTLKTLPEGLNKVITGAQTGEYRVYSDPNGFTYV 518 Query: 270 IAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 I + + + ++A + ++ K E+ KLR + + + Sbjct: 519 ILVRNVIPEQVQSFPEVEATIRKNVQSEQLNKLVVEWADKLRKASDVKIF 568 >gi|186681350|ref|YP_001864546.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nostoc punctiforme PCC 73102] gi|186463802|gb|ACC79603.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nostoc punctiforme PCC 73102] Length = 260 Score = 45.1 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 33/273 (12%), Positives = 74/273 (27%), Gaps = 36/273 (13%) Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 TIN ++I+ I + + L+ G+ +++ ++E + + T Sbjct: 8 TINDQIIS---IEEAVKYLQASGKLGQFIGDILRQHVIEEEIR--TRDDIEIGTAITEQA 62 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 +N + F +L F + + K E +I Sbjct: 63 IIDFRLKNQLTDPQSFQEWLKTNNTDYATFHTSVTFGYKLEKL-------KAVVTEPKIQ 115 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 + K R L R V+ + ++ + + ++++ Sbjct: 116 EYFIERKIFLDRIVLSRIVVNN------------RELADELQTQIEEGGSFEQLAKEYSL 163 Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYV-----TQKG---VEYIAICDK 275 + G + + + + S P + +G + Sbjct: 164 SDDRIVNGMMGIVSRGSMPDILRAAIDVASPGQLIGPIEIVGKDSPQGEGPYGLFRVEQF 223 Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 E L EK AE ++KL Sbjct: 224 LPASLEDT---QLKQALQNELFEKWLAEKIQKL 253 >gi|222086022|ref|YP_002544554.1| peptidyl prolyl cis-trans isomerase D signal peptide protein [Agrobacterium radiobacter K84] gi|221723470|gb|ACM26626.1| peptidyl prolyl cis-trans isomerase D signal peptide protein [Agrobacterium radiobacter K84] Length = 630 Score = 44.7 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 18/166 (10%), Positives = 37/166 (22%), Gaps = 13/166 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI--------T 52 M + ++ ++ F I I S SS T+ + I Sbjct: 1 MFDVLRKLAKTWVAKGIFVLLIAAFSIWGIESRMVTGGSSNAVVTVGDQKIDTNEFRLAY 60 Query: 53 DGDISKRIALLKLQKINGELE-----KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 I L++Q + + V +L+ Q + + + Sbjct: 61 RRQIQAISQQLRMQITPEQARAFGIAQQTVAQLVAGASLDQLASDMNLGLSQDRLAQLIG 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 L+ + N + V Sbjct: 121 DDPAFKALNGTFDRQKFESLLRNSNINPDDYIKERSKVAVRSQIVE 166 >gi|330994544|ref|ZP_08318468.1| Peptidyl-prolyl cis-trans isomerase D [Gluconacetobacter sp. SXCC-1] gi|329758398|gb|EGG74918.1| Peptidyl-prolyl cis-trans isomerase D [Gluconacetobacter sp. SXCC-1] Length = 665 Score = 44.7 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 28/386 (7%), Positives = 86/386 (22%), Gaps = 86/386 (22%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR--IRTTINGEVITDGDISKRIALLKLQ-- 66 ++ + + F + + R + + I + Q Sbjct: 33 SWVGRIVAGLFFLAFIGFGVGDVLMNIGTERADVAARVGSRPILVQSYQNALQSEMPQVA 92 Query: 67 -------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113 ++ + +Q L+++ + ++ G+ + V Sbjct: 93 QSMHLSDPAQIPPATREQVARQVLQRLVLQAEIAEAADRHGLIVPDSVVRDEIFSIPAFR 152 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD------------------VVKNDF--- 152 G + + + + + + L +V+ F Sbjct: 153 GTNGQFDRALFNDRLHRTGMTEGRLIELVRQEQASRVLLEPIRDGATVPDVMVRRLFDFE 212 Query: 153 ----------------MLKYGNLEMEIPANKQKMKNITVREYLIR------------TVL 184 + ++ +L Sbjct: 213 AQTRTIDLVRVPFDSQQVTATPTPAQLARYHANHPWEFTAPEYRHARVVVLSADTIGRML 272 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG------------ 232 ++ + E +++ + A + G Sbjct: 273 DITDAELQKSYQDQAQTFSAPERRSVQIVTVPTQDRATALRARWTDAGAWAQVQKDAGRD 332 Query: 233 ----KAQYLLESDLHP-QFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDL--GGEIAL 284 + + ++D+ + + + T P ++ G + + Sbjct: 333 AAAVELPGMKQTDIPSADLGRAIFAAPVDVTQGPVKSEGGWVVFRVTTLTPAHTTPFADV 392 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRS 310 K L Q T+ + A+ V+KL+ Sbjct: 393 KQALHDQIAHTRAQALLADRVQKLQD 418 >gi|895826|emb|CAA61475.1| nifM [Pantoea agglomerans] Length = 62 Score = 44.7 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 6/58 (10%), Positives = 20/58 (34%), Gaps = 2/58 (3%) Query: 253 SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++P T+ G + R + + Q + ++ +++++L Sbjct: 2 EAGQLSSPVETELGWHLLLCEQIRLPQPLPKAEALTRVRQQLIARQQNHYQRQWLQQL 59 >gi|172065639|ref|YP_001816351.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria MC40-6] gi|171997881|gb|ACB68798.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia ambifaria MC40-6] Length = 279 Score = 44.7 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 32/278 (11%), Positives = 68/278 (24%), Gaps = 48/278 (17%) Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 + T+NG + ++ + + +Q L+ L +Q Sbjct: 34 VVATVNGVALHRVELDEAM-----TGRPESARGEVLQGLVARELLRQA------------ 76 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 A GL ++ D + Y+A V ++ +Y + Sbjct: 77 --------AERDGLGNAQPVRAAMQKAKVDTENRLYVARHLPMQPVTDDEVRQRYNEIVS 128 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLE 220 +I Y + S D + ++ + R + Sbjct: 129 QI------------GPYQYKVSQMSFADEPTARFALALLEKGESFANVATRSHASDAQTS 176 Query: 221 KFASKIHDVSIGKAQYLLESDLH-PQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRD- 277 + + L P Q L T P + ++RD Sbjct: 177 WISFRQPVKDGQTLG------LPLPLAQALATMQPGQFTNAPLHVGDRFIVARLDERRDT 230 Query: 278 -LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + A + + ++ +L A I Sbjct: 231 VIPSYTQASAAMRKAMESKRNGDAFVTFIGQLARKAEI 268 >gi|163787467|ref|ZP_02181914.1| peptidyl-prolyl cis-trans isomerase [Flavobacteriales bacterium ALC-1] gi|159877355|gb|EDP71412.1| peptidyl-prolyl cis-trans isomerase [Flavobacteriales bacterium ALC-1] Length = 718 Score = 44.7 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 21/233 (9%), Positives = 62/233 (26%), Gaps = 6/233 (2%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 +K+ I ++ + + S S + T+NG+ I D +++ Sbjct: 4 LNKIRQRSLILILVIALALFSFVIGDLFKNSDALTGESQDVIATVNGKDINRLDFQQKVK 63 Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 + + A+ + + L+K ++ + + FS Sbjct: 64 SYQERVGGRVSSTQAMNTIYNQELRKIVMKSEFEALGLSVEKDEMRDLLK------TSFS 117 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 S+ + Q L ++ + + T+ ++ Sbjct: 118 SYPEFQDENGIFDVNRLNAFIANLKDLQGANPDSAPLGNFLVNYDSWTNNEQTIAANAVQ 177 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 +++ + + + + + A + +VS Sbjct: 178 QTYYNMIKAGVSTTISEAEDEYFGDAKTVDIRYVQVPYTSIADSLVEVSKNDI 230 Score = 40.8 bits (93), Expect = 0.28, Method: Composition-based stats. Identities = 34/243 (13%), Positives = 73/243 (30%), Gaps = 16/243 (6%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 ++ DIS I + + E +I E E K E + + + Sbjct: 224 EVSKNDISAYIKNNEEKYKVDERREIVYVEFKEEASKADEDRIKADLLKLKSDRPEWNES 283 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV--------VKNDFMLKYGNLE- 160 ++NT S+ + I N +Y + +K D YG Sbjct: 284 SKNTDTIPGFDSTTNVEDFINANSDIKYNDAFLRAAQLPATAKDTLMKLDVGSYYGPYRD 343 Query: 161 -MEIPANKQKMKNITVREYLIRTVLFSIP------DNKLQNQGFVQKRIKDAEESRLRLP 213 +K +R +L + + + Sbjct: 344 GEYFKLSKIITVKQLPDSVNVRHILVPFAGASNAGPDVTKTLAEAKITADSILAKIKSGT 403 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273 K + LE + K+ + + G+ ++ + + P+F+ ++ + T G I I Sbjct: 404 KFMDLLELSSDKVSNENDGELEFAYNAGMAPEFKAFSFDNKVGDIDVVGTSFGYHIIEIL 463 Query: 274 DKR 276 +++ Sbjct: 464 EQK 466 >gi|190570945|ref|YP_001975303.1| peptidyl-prolyl cis-trans isomerse D, putative [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357217|emb|CAQ54634.1| peptidyl-prolyl cis-trans isomerse D, putative [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 599 Score = 44.7 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 23/207 (11%), Positives = 60/207 (28%), Gaps = 21/207 (10%) Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 D + LD ++F + + + + F + + E+ + + + Sbjct: 198 PEPDDQALLDLYERNKSNFYYPEYRTAQYISLDQKYFEDQIRISDEEVDSIIEHQELKNQ 257 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R+ + + + EES+ + + K V+ Sbjct: 258 RDIFNVIF---------PTKEKAEIARRALEESKASFEQIIEEFNKVKLDETRVNN---- 304 Query: 236 YLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQN 292 + + L + + + + G I + + E LK + + Sbjct: 305 -ITKDFLPENMREKVFALKTGEVSEVLTSNFGWHVIKVESIHQISDEDLVDLKKDIRSVL 363 Query: 293 TPTKIEKHEAEYVK----KLRSNAIIH 315 T K + +++ K+ + A I Sbjct: 364 TNQKSFEKVNDFINQVNYKIYNGATIE 390 >gi|159044344|ref|YP_001533138.1| putative peptidyl-prolyl cis-trans isomerase [Dinoroseobacter shibae DFL 12] gi|157912104|gb|ABV93537.1| putative peptidyl-prolyl cis-trans isomerase [Dinoroseobacter shibae DFL 12] Length = 614 Score = 44.7 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 16/162 (9%), Positives = 43/162 (26%), Gaps = 20/162 (12%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK 67 S+F + +++ I S+ ++ IT + ++ + Sbjct: 4 KTSNFFMFILLGLLIVALAGFGISSFGGSNAR---VGSVGDTDITVDEYARALQTQLRAA 60 Query: 68 INGE-------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN-- 112 L++ + +L+ E K G++ V Sbjct: 61 GQQRGRAVSMAEARELGLDRQVLAQLVNTAAIDNEAAKLGVSVGDMRVAEQIQTIPAFSG 120 Query: 113 --TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 G E + L + + F+ + ++ + Sbjct: 121 IGGGFDREAYEFTLQQNNLSPEEFEADVRNEAARNLLQAAVI 162 >gi|262340880|ref|YP_003283735.1| peptidylprolyl isomerase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272217|gb|ACY40125.1| peptidylprolyl isomerase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 697 Score = 44.7 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 31/283 (10%), Positives = 67/283 (23%), Gaps = 14/283 (4%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 I + +I I K L ++ L E Sbjct: 214 HPIKNYEIYDYIKKNKFFYKTENLRNLSFVILRSHPSLDDEKNMDNKIRKLFQELKSSDH 273 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 H+ +E Q ++ + + ++ K Sbjct: 274 HSMIVSNQSERPFDSNFYLKKNLPPILQDFVEKNNRIGSMFGPVKENNIYIMAKLTGKKM 333 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 ++ LI N+ + K + + + K + Sbjct: 334 VHNSVLFSHILISHKEAVRSSNQRSKKKAENIAKKIYNTVQKNPYQFDALVMKKSDDFIK 393 Query: 229 VSIGKAQYLLESDLH--PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286 + G ++ + + + +++ T T+ G + I D++DL Sbjct: 394 NNKGNLGWMKYEEQNNLKKLDIFSSENKKGTIAFTETKFGYHILRIEDQKDLKPVYQFSI 453 Query: 287 YLSAQNTPTKIEKHE------------AEYVKKLRSNAIIHYY 317 + K E + L +NA I Y Sbjct: 454 IIKTLVPSKKTEDLLHKNAVQFIKQNKNSNLNTLINNARIKKY 496 >gi|254417316|ref|ZP_05031059.1| hypothetical protein MC7420_8085 [Microcoleus chthonoplastes PCC 7420] gi|196175854|gb|EDX70875.1| hypothetical protein MC7420_8085 [Microcoleus chthonoplastes PCC 7420] Length = 245 Score = 44.7 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 25/265 (9%), Positives = 63/265 (23%), Gaps = 31/265 (11%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 + IT ++ +A +L L +I + + I E+ + Sbjct: 4 ILKVGDRTITAEEVIPLLAKYQLL--PQLLREIIIDQAI--ATLDCTDEEKNAACEQFYT 59 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 S + + K Q+ W +++ F+ + G L+ Sbjct: 60 KNQLTSEEERQAWRDRQDLSLEQVEELAVRGLKLEKFKQATWGHKIESYFLKRKGRLDRV 119 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + + + + + Sbjct: 120 IYSLIRT--------------------------KEAAIAQELYFRIQEGEQSFNELARDY 153 Query: 223 ASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + + G + S Q L P I + + + Sbjct: 154 SQGPEAQTGGLVGPVELSTPHPTLAQMLTVSQPGQLLPPTRLGDWFIVIRLEKFLPVQLD 213 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVK 306 A++ L + T +++ + + Sbjct: 214 DAMRQRLLDEMFTTWLKEQLRQQIS 238 >gi|297205678|ref|ZP_06923074.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus jensenii JV-V16] gi|297150256|gb|EFH30553.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus jensenii JV-V16] Length = 319 Score = 44.7 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 37/318 (11%), Positives = 83/318 (26%), Gaps = 40/318 (12%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRIALL 63 +F + FI + + V ++ + A SS + G IT + K + Sbjct: 8 MFIRMWRFISMNKYWKKAAAIVAVAGIALSATACSSSATLVSYKGGKITQDEYYKELK-- 65 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 + + K + +I+ KQ+ K + + + ++ SA + + + Sbjct: 66 -----SSQAGKSTLANMIIYRALKQQYGKKVSQKQVDKEYNAYKKQYGSSFESALEQNGY 120 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + + + K + ++ + Sbjct: 121 TTSSFKKNIETNLLTVAALKDIKKITSKQEQKAWKS--------------YQPKVTVQHI 166 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESD- 241 L + +D + +K++ GK +D Sbjct: 167 L-----------VSKKSTAEDIIKQLKSGTSFATLAKKYSTDSATKDKGGKLAAFDSTDT 215 Query: 242 --LHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 K T P TQ G E I + G K + Q + + Sbjct: 216 TLDSDFKTAAFKLKTGEYTTTPVKTQSGYEIIKMIKHPSKGKFSDHKKEIDEQIYQSMEQ 275 Query: 299 KHE--AEYVKKLRSNAII 314 ++ + + I Sbjct: 276 DTATMQSVIRTVLKKSDI 293 >gi|78043454|ref|YP_359635.1| hypothetical protein CHY_0781 [Carboxydothermus hydrogenoformans Z-2901] gi|77995569|gb|ABB14468.1| hypothetical protein CHY_0781 [Carboxydothermus hydrogenoformans Z-2901] Length = 209 Score = 44.7 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 23/187 (12%), Positives = 56/187 (29%), Gaps = 6/187 (3%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE-K 74 + ++ + ++ + INGE +T +++K I ++ Sbjct: 17 IFFALAGLLLSVKFFLNVNQKTYQPNVLVIINGEALTTSEVNKVIKNYRIAGSQAANRLD 76 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 + +LI E L QE ++ I + Q + + + + + + Sbjct: 77 QILSDLIDEKLILQEAKRRKIDATREEIEARLKQLKNHLPSLYQQIYT-----QMSEKEY 131 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 K+ L + I + + E + K + ++ + LQ Sbjct: 132 KEILKNRIIIQKLYTEVISSQKNKPTGEHEPLETSQKEKEIFAKWVKELREKADITFLQE 191 Query: 195 QGFVQKR 201 K Sbjct: 192 NIQNFKE 198 >gi|307105334|gb|EFN53584.1| hypothetical protein CHLNCDRAFT_58544 [Chlorella variabilis] Length = 271 Score = 44.7 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 22/82 (26%), Gaps = 7/82 (8%) Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + + G ++ + +F+ T+ GV + + +R Sbjct: 100 HSQCPSRSNGGSLGWIAKGQTVAEFEEAAFGCAPGALAMCETRFGVHLLTVTAERQA--- 156 Query: 282 IALKAYLSAQNTPTKIEKHEAE 303 A + + E A Sbjct: 157 ----AEVRHMSVQELAESLAAR 174 >gi|239617251|ref|YP_002940573.1| hypothetical protein Kole_0859 [Kosmotoga olearia TBF 19.5.1] gi|239506082|gb|ACR79569.1| hypothetical protein Kole_0859 [Kosmotoga olearia TBF 19.5.1] Length = 323 Score = 44.7 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 28/330 (8%), Positives = 79/330 (23%), Gaps = 40/330 (12%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 +K +L++F + + + T+NGE IT + + ++ Sbjct: 1 MKKFLVISLLVLFSAGIFATSEINPDKTTPVATVNGEPITMYEFLAEVMPNYMEIAKKVE 60 Query: 71 ---------------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 E EK + ++I L Q ++ + D + Sbjct: 61 EVDPLFSEVLTSTEAGKTLLTEYEKRVLAKMIERKLFLQLAKQLDVAIDMQALKEKIHNI 120 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 D + + V+ + + + + Sbjct: 121 IIQNLKENNISIEIADLYYTLKGYTGGLEMYEV---RVLNETAYRQTYDAIYQALTSDAT 177 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + + +Y + + + + F + + Sbjct: 178 VTEEEIVQYYKANKKIVLKIKGFDSFAPA-------YTFLNNAKASDDPVSLFDVEDREY 230 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 + + + T+ + + ++ L+ +S Sbjct: 231 TFENLIKETGISTDTAVFLFDEFKKGLYPKVISTETKHYVVYLSGEK---SLEELRDEIS 287 Query: 290 AQNTPTKIEKHEAEYVKK----LRSNAIIH 315 + K + ++++ R AII Sbjct: 288 KKLLEEKKKNIWNTFIEQYFVPFREQAIIE 317 >gi|300311306|ref|YP_003775398.1| peptidyl/prolyl cis-trans isomerase [Herbaspirillum seropedicae SmR1] gi|300074091|gb|ADJ63490.1| peptidyl/prolyl cis-trans isomerase protein [Herbaspirillum seropedicae SmR1] Length = 304 Score = 44.7 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 30/283 (10%), Positives = 75/283 (26%), Gaps = 45/283 (15%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 A S + +++G+ IT ++ + ++ N K + L+ + K + Sbjct: 35 QAASGQALASVDGKEITIHQLNAELGKGGAREAN----KQVLDGLVARQVLVNAARKEKL 90 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 D + + + V+ Sbjct: 91 DADPAVLAD------------------------------MERARDLVLAQSYVQRKLAKP 120 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + E+ + + + ++ V + + L + Sbjct: 121 TRPSQQEVSTFYDQHPD------WFAQRQQYEFAELVIDRASVNEELTKMMVGVRPLEEV 174 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 L+K + + DL P +KK + A+ D Sbjct: 175 AAWLQKQHIPFTRLQV----TKTSMDLPPPMLAGVKKMEKGQLFIVNEGDAAILAALADV 230 Query: 276 RDLGGEIALK-AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 R++ A + + + + V +L+++A I Y+ Sbjct: 231 RNVPLSRAAATQQIEQYLANQRQGEITEQAVARLKADAKIVYF 273 >gi|322699785|gb|EFY91544.1| hypothetical protein MAC_02429 [Metarhizium acridum CQMa 102] Length = 793 Score = 44.7 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 26/287 (9%), Positives = 81/287 (28%), Gaps = 23/287 (8%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQEL-----------IVETLKKQEIEKSGIT 96 E I + + Q++ + K A + + + KQ + Sbjct: 260 NEKIHQSAVEMAKKMYAGQQLGADQPKDAPGQGSGASQPNQYMNLQDAAYKQAQARIAKL 319 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---FM 153 D + F ++ N S + ++ + ++ F Sbjct: 320 HDEYHQSREFQEYYGNEKASNPKHRFSMSRKWGRRGSHSDEDLDDRQKSEKIREQMSMFS 379 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 K ++ E ++ + + + + I D E + Sbjct: 380 SKLSQVDKEKRHKDREALLAAAQRNVKAQLHGMDEKVYQETGRANPTLITDWEAKAQKAA 439 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG-VEYIAI 272 + ++ S+ G ++ + ++ ++ ++ + T++ E + + Sbjct: 440 QAQHEARTDDSEGKIDLGGGM-FMTQEQVNAIASKKIQPVLDDINDKAETERERQEVLKM 498 Query: 273 CD-------KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + +++ + +K K E+ + +K+ A Sbjct: 499 EEQARREQAEKEKARDREVKEIAKKDKEQEKQEEKAKKLQEKMEEKA 545 >gi|308272984|emb|CBX29588.1| DNA-directed RNA polymerase subunit beta' [uncultured Desulfobacterium sp.] Length = 1470 Score = 44.7 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 10/121 (8%), Positives = 28/121 (23%), Gaps = 6/121 (4%) Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + ++ K E + +++ ++ G L + Sbjct: 567 WEIIPKENIVRMSHIMVSSEEVAKSVHERIRNGEAFSQMVNQYSESLNKKLDGDIGLLRK 626 Query: 240 SDLHPQFQNL-----LKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNT 293 + F + + +Q I +KR ++ + K Sbjct: 627 EEFTRIFDIDDADLVFSVEEGEISEIIPSQDKYHIFQINEKRAEIPFDAINKVQDKKSLR 686 Query: 294 P 294 Sbjct: 687 D 687 >gi|224010677|ref|XP_002294296.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970313|gb|EED88651.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 116 Score = 44.7 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 6/73 (8%), Positives = 17/73 (23%), Gaps = 1/73 (1%) Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT 258 K + + + + + G + + F++ + Sbjct: 41 KVYEAKIKEEGVDGSFPRYAGERSDCGSFQNNGDLGFFGRGMMQKPFEDASFALQVGEMS 100 Query: 259 NPYVTQKGVEYIA 271 T G+ I Sbjct: 101 GIVSTDSGLHLIY 113 >gi|21672727|ref|NP_660794.1| peptidyl-prolyl cis-trans isomerase D [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008943|sp|Q8K987|PPID_BUCAP RecName: Full=Peptidyl-prolyl cis-trans isomerase D; Short=PPIase D; AltName: Full=Rotamase D gi|21623371|gb|AAM68005.1| peptidyl-prolyl cis-trans isomerase D [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 621 Score = 44.7 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 35/396 (8%), Positives = 98/396 (24%), Gaps = 85/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + L+ I +++ I +Y + ++R +NGE I+ + K Sbjct: 1 MIKYLKSRLNIIIVKCILGIIILSLVFGTINNYFNR-DTTRYIAKVNGEEISFITLQKMY 59 Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 + ++ E + +LI L +Q ++ N + Sbjct: 60 IDERKKQEKILGQDFEKIKKNKKFKEETYNYILSQLINNILLEQYTKRMNFNIQDNEIKK 119 Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150 N + + + ++L + + + + + ++ Sbjct: 120 IIFNIPIFQENNEFNKKKYLNYLSSKNLTHYEYVSLIRKKLNTTYLINAISETDFILDNE 179 Query: 151 ----------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + E EI + KN + + Sbjct: 180 QKKIIKLLSEKRIIKKAIIKINPIINNQKVTEKEINNYFDQHKNEFYTPEKFKISYIQLK 239 Query: 189 DNKLQNQGFVQKRIKDAEESRLR-----------------------------LPKDCNKL 219 NK + Q ++ +++ + Sbjct: 240 PNKFKIQCSNEEIKNWYKKNIDKYSNQERRQYSIIQTKTKNEALSILSELKKGEDFSKIA 299 Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278 ++ + G ++ ++ + + + + + +N I + Sbjct: 300 KEKSIDPFSSEQGGNIGWITKNFVPNEIKIANLEKIDQISNIIKFNNNFLIIKLNKILPK 359 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + +S + KKL+ I Sbjct: 360 KYKKIS--EVSDLIENEIKYQKSLNTYKKLKDKIAI 393 >gi|269302857|gb|ACZ32957.1| conserved hypothetical protein [Chlamydophila pneumoniae LPCoLN] Length = 363 Score = 44.7 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 95/302 (31%), Gaps = 34/302 (11%) Query: 34 KSWAMSSRIRTTINGE-VITDGDISKRIALL-------------KLQKINGELEKIAVQE 79 A+ RI ++ E V+T D+ ++ LL + + + ++ Sbjct: 49 SGLAIHDRILFKVDEENVVTTLDVIHKLNLLFYNSYPHLIDSFPARSQYYTAMWPVVLES 108 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 +I E L + + I D VN + ++ F N + L Sbjct: 109 VIDEFLMVADAKAKRIATDPTAVNQEIEEMFGRDLSPL--YAHFEMSPNDIFNVIDRTLT 166 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 Q + +V++ MLK +I +K++ R+ + + + +I N + Sbjct: 167 AQRVMGMMVRSKVMLKVTPG--KIREYYRKLEEEASRKVIWKYRVLTIKANTESLASQIA 224 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 +++ KD + G+ E + K + + Sbjct: 225 DKVRARLNEAKTWDKDRLTALVIS------QGGQLVCSEEFSRENSELSQSHKQELDLIG 278 Query: 260 --------PYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLR 309 P + G + + DK E +++ + + E E +Y +LR Sbjct: 279 YPKELCGLPKAHKSGYKLYMLLDKTSGSIEPLDVMESKIKQHLFALEAESVEKQYKDRLR 338 Query: 310 SN 311 Sbjct: 339 KR 340 >gi|225677192|ref|ZP_03788188.1| peptidyl-prolyl cis-trans isomerse D, putative [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590779|gb|EEH12010.1| peptidyl-prolyl cis-trans isomerse D, putative [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 120 Score = 44.7 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 34/115 (29%), Gaps = 8/115 (6%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ- 66 ++ +F +T + + + I + S + EVIT + + Q Sbjct: 2 NVKNFFTKVTVVLLACLLIFMGIGNLLSGDDEKEEVARVGKEVITSDEYKSLYQNYEKQI 61 Query: 67 -------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 + +L+ + LI + L + G+T + Sbjct: 62 SGSDASREQVKKLKYDLLNALIEQKLLFNLTSELGLTVGEESTKNHIKNTKYFQN 116 >gi|225629761|ref|ZP_03787708.1| peptidyl-prolyl cis-trans isomerse D, putative [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591385|gb|EEH12478.1| peptidyl-prolyl cis-trans isomerse D, putative [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 445 Score = 44.3 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 17/226 (7%), Positives = 67/226 (29%), Gaps = 18/226 (7%) Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 K E + A +D + + + + Sbjct: 11 EKIDEQIYKSRYQTRVVDIVKITEDAVTNIPEPDDQALLDLYERNKSHFYYPEYRTAQYI 70 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 + + F + + E+ ++ + R+ +F+ + + ++ ++ Sbjct: 71 S-LGQKYFEDQIKISDEEVDGIIEQQELKNQRD------IFNAIFSTKEEAETARRAFEE 123 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 + S ++ ++ K + +++++ + + L + + + + Sbjct: 124 GKTSFEQIVEEFGKAKLEETRVNN--------ITKDFLPEDVREKVFALKVGEVSEVLAS 175 Query: 264 QKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKK 307 G + + + E LK + + T K + +++ + Sbjct: 176 SFGWHIVKVESAHQISDEDLVDLKKDIKSVLTNQKSFERVNDFINQ 221 >gi|227517652|ref|ZP_03947701.1| peptidylprolyl isomerase [Enterococcus faecalis TX0104] gi|227074909|gb|EEI12872.1| peptidylprolyl isomerase [Enterococcus faecalis TX0104] Length = 362 Score = 44.3 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 27/315 (8%), Positives = 77/315 (24%), Gaps = 41/315 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K + +L + + S + + S+ T+ G IT D +I Sbjct: 19 KRMKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------GQSTS 71 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A ++++ + + + D + + E + Sbjct: 72 QQAFSQMVIYKVFEDKYGNKVTDKD-------VQKKFDDAKEQMEAQGAKFTDALKQYGL 124 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 ++ Q + + ++ + + Sbjct: 125 TEKDFKKQLKQTAAFQEGMKAHLKITDEDLKTAWASFHPEVEAQII-------------- 170 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQF--QNLL 250 Q + K ++ + + GK ++ +S P + Sbjct: 171 -QVASEDDAKAVKKEITDGGDFAKIAKDKSTDAATKKDGGKIKFDSQSTTVPAEVKEAAF 229 Query: 251 KKSQNNTTNPYVTQKG------VEYIAICDKRDLGGE-IALKAYLSAQNTPTKI--EKHE 301 K + P + + + G + + + TK+ + + Sbjct: 230 KLKDGEVSEPIAATNAQTYQTTYYVVKMTKNKAKGNDMKPYEKEIKKIAEETKLADQTFQ 289 Query: 302 AEYVKKLRSNAIIHY 316 A+ + A + Sbjct: 290 AKVISDELKAANVKI 304 >gi|169343343|ref|ZP_02629952.2| hypothetical protein CPC_A0044 [Clostridium perfringens C str. JGS1495] gi|169343349|ref|ZP_02864354.1| hypothetical protein CPC_A0045 [Clostridium perfringens C str. JGS1495] gi|169344564|ref|ZP_02865531.1| hypothetical protein CPC_A0048 [Clostridium perfringens C str. JGS1495] gi|169297303|gb|EDS79414.1| hypothetical protein CPC_A0048 [Clostridium perfringens C str. JGS1495] gi|169298518|gb|EDS80603.1| hypothetical protein CPC_A0045 [Clostridium perfringens C str. JGS1495] gi|169298526|gb|EDS80609.1| hypothetical protein CPC_A0044 [Clostridium perfringens C str. JGS1495] Length = 227 Score = 44.3 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 48/128 (37%), Gaps = 11/128 (8%) Query: 13 IKLLTTYFVLIIFCI-VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 +K + +F+ + + ++ + + ++ +NG IT+ DI + NG Sbjct: 1 MKKIIGFFLALTVIFQLSAINVFATESNDKVIAIVNGIEITEKDIDE----------NGI 50 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + L ET + E + + + + + +V+ +N + + + ++Q Sbjct: 51 INNSVFDTLKEETRNEDEEKITPRSKRYSVPSTLYVKKGQNALMVKKLGAPRFNQQTDTY 110 Query: 132 NHFKQYLA 139 + Sbjct: 111 FLNPKDAK 118 >gi|294827676|ref|NP_710751.2| hypothetical protein LA_0570 [Leptospira interrogans serovar Lai str. 56601] gi|293385519|gb|AAN47769.2| hypothetical protein LA_0570 [Leptospira interrogans serovar Lai str. 56601] Length = 279 Score = 44.3 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 25/290 (8%), Positives = 68/290 (23%), Gaps = 47/290 (16%) Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78 + ++ ++ + + S +NG I + + + L N E+ Sbjct: 19 ALFGFLLALIGLLFPEREILLSDTVAEVNGNYIKKDEYFRTLTALSSDSKNSITEEA--- 75 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 N + + + + L Sbjct: 76 -------------------------------RANVLERLIEEELLVQRGLELGFAREDRL 104 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 SI V+++ + + N R + + + + Sbjct: 105 IRASIVRAVIQSIISENVSEKPNVLELRSYFLLNRDKFLKTSRYQVMVYQQSDEVSATRI 164 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 K +++A + K+ D L + Sbjct: 165 SKELREAGRTMAPNVYYIPNTLLPLRKLLDYLG-----------PDVVLALGNLKSGEVS 213 Query: 259 NPYVTQKGVEYIA--ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 +P + + + + + ++K + A K ++ EY+ Sbjct: 214 DPIKSGEKFFVVKVFVLEPGSTPDFDSVKKEVEASYIQEKGDRTLREYLD 263 >gi|241761010|ref|ZP_04759099.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374629|gb|EER64090.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 642 Score = 44.3 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 14/255 (5%), Positives = 58/255 (22%), Gaps = 7/255 (2%) Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN-TGLSAEDF 120 L + +L ++++ + + + L+ Sbjct: 147 LAQQHMTADQLRSDIAEDMVRRQILIPIVAGLKTPNAMAEPFARMLIQRHEGMILAIPTT 206 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + D + + + + E+ + ++ + Sbjct: 207 VMPPSDKAPDDKAIADFYKSHIERYTLPEQRVIRYALVKPDEVKPTEVQIADYFKSHASE 266 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY--LL 238 + + Q + + + D+ +G Sbjct: 267 YA--ATEKRDLSQIILPDKAAAEALLAKIHGGLNFVAAAKTVGFSSEDIRLGALSKEQYS 324 Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI--CDKRDLGGEIALKAYLSAQNTPTK 296 E +N + G + + +++ ++ ++ Q + + Sbjct: 325 EKASPEAANAAFSLGDGAVSNVLHSPLGWHIVHVDKIERKPAATLDQMRGEITRQLSESL 384 Query: 297 IEKHEAEYVKKLRSN 311 K + +++ N Sbjct: 385 TSKAMTAKINRIQDN 399 >gi|116619875|ref|YP_822031.1| hypothetical protein Acid_0747 [Candidatus Solibacter usitatus Ellin6076] gi|116223037|gb|ABJ81746.1| hypothetical protein Acid_0747 [Candidatus Solibacter usitatus Ellin6076] Length = 214 Score = 44.3 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 63/203 (31%), Gaps = 11/203 (5%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI-----N 69 +L + + + RI ++ VIT D+ + I + Q + Sbjct: 1 MLIKALCTGLLAMAV-----RGEIIDRIAVSVGTRVITQSDLDRAIRVAAFQDGVKLDFS 55 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITF-DSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 +K Q LI + L + E+E S D ++ Q + + + L G Sbjct: 56 AARKKAVAQALIEQKLVQIELESSRYPLPDPAEISPAIEQFKKEHFKDDAAYRAALAAYG 115 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 I + F+ L Q V+ F E E+ A +K + Sbjct: 116 ITEQDFRDMLLWQRTLLLFVQMRFETGAPVTESEVQAYFEKNVRPQAEAAHPGQPVLLED 175 Query: 189 DNKLQNQGFVQKRIKDAEESRLR 211 Q +R ++ L+ Sbjct: 176 FRGQIEQAISGQRADQQVDTWLK 198 >gi|113474123|ref|YP_720184.1| hypothetical protein Tery_0223 [Trichodesmium erythraeum IMS101] gi|110165171|gb|ABG49711.1| conserved hypothetical protein [Trichodesmium erythraeum IMS101] Length = 253 Score = 44.3 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 75/255 (29%), Gaps = 24/255 (9%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 +IT DI + +KL EL++ + E + E Sbjct: 6 IITAEDI---LKHIKLSLKTSELKEEIITR---EIILNAAKEAGIKVETEELQKAADTMR 59 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 N SA+D ++L+K + + F++ + I + +V + F K + Sbjct: 60 FVNKLHSAQDTFAWLEKFCLSIDDFEEVVYISVVAQKLVAHLFADKV-------EPYFYE 112 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + + VL + + + + Sbjct: 113 NQLNYAGVVMYEVVLDDQDLGMELFYAIQEGETSFYDVAHEYIEDIEL----------RR 162 Query: 230 SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 G L DL P+ + P VT KGV I + + + L++ + Sbjct: 163 QGGYRGVLYRKDLKPEISAAVFAAKPPQMIKPIVTSKGVHLIFVEEIISAELDNKLRSQI 222 Query: 289 SAQNTPTKIEKHEAE 303 A+ ++K Sbjct: 223 FAELFDEWLKKQVES 237 >gi|254994931|ref|ZP_05277121.1| peptidyl-prolyl cis-trans isomerase D (ppiD) [Anaplasma marginale str. Mississippi] Length = 630 Score = 44.3 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 25/382 (6%), Positives = 94/382 (24%), Gaps = 84/382 (21%) Query: 10 SDFI-KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-------- 60 + F+ +L +F V S R + ++ + S Sbjct: 5 NVFVGAVLAAVLCAFVFVTFGSVLPFGGTASDRCVAKVGSSCLSLREYSMAYRGELSYIE 64 Query: 61 ----ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 L + ++++ + ++ + + ++ ++ + + ++ S Sbjct: 65 SLVHQKLSEDDMRFGVKEMTLSRMVDDMVLEKFAKELNLRVSNKSIRDLIGDMPMFQDKS 124 Query: 117 AEDFS--------------------------------SFLDKQGIGDNHFKQYLAIQSIW 144 + + G + + A + Sbjct: 125 GKLDEQRFKDLLADAGMTEASYIGKVRGSLPAFVLSECIFPRSGEVYSQYYDGFAQDVLR 184 Query: 145 PDVVKNDFM------------LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK- 191 + + ++E N+ + + ++ Sbjct: 185 GIMQSRTVDIVEISQSAVENTSTPTDSDLEAMYNEGTKNGELIMPEYRSAEYMIVSEDDA 244 Query: 192 ------LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG--------KAQY- 236 ++ + + + + R L + ++ + G Sbjct: 245 LDEVTASNDEVESEIKNSELHDQRDVLNLVFPSESEASAAYKAIKEGKAFEAVVKDLGTT 304 Query: 237 --------LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALK 285 + + L + +N + ++ + + + G + I K + + LK Sbjct: 305 VEEVTLRNVTKELLPIEVRNTVFDLNEGEVSGVFRSVVGWHVMKILSKHPISAKDLKKLK 364 Query: 286 AYLSAQNTPTKIEKHEAEYVKK 307 ++ K + + ++K Sbjct: 365 EKVAMSIKRQKARELFSASIRK 386 >gi|184155805|ref|YP_001844145.1| peptidylprolyl isomerase [Lactobacillus fermentum IFO 3956] gi|183227149|dbj|BAG27665.1| peptidylprolyl isomerase [Lactobacillus fermentum IFO 3956] Length = 330 Score = 44.3 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 27/282 (9%), Positives = 73/282 (25%), Gaps = 32/282 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 + ++ A ++ T +G IT+ + + K +Q++I+ Sbjct: 7 LAIIAGLALALPLAACGNKAVATTSGGKITESEYYSSMK-------QTSNGKQVLQQMIL 59 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + + +++ T + N+ + + ++ + K Q Sbjct: 60 DKVLEKQYGSKVSTSEVNSEYNAYKKEYGSSFSTVLSEEGLTAK----------SFKQQI 109 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 ++K + +K + ++ + Sbjct: 110 RSNLLLKAAVRNYSTFSSSALKKQWKKYEPKVQTAEIL----------VGSKETAQSIID 159 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKA---QYLLESDLHPQFQNLLKK-SQNNTT 258 S +L + + ++ S G ++ L ++ T Sbjct: 160 TLNNTSGSKLKEFKKLAKSKSTDTTTKSNGGVVSAFDNTDTSLPSAYRKAAFALKTGEYT 219 Query: 259 -NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 P T G I + G + + L Q + Sbjct: 220 TEPVKTDNGYYVIYMIKHPAKGKYSSHISDLKDQIVTQNLNN 261 >gi|298506530|gb|ADI85253.1| conserved hypothetical protein [Geobacter sulfurreducens KN400] Length = 572 Score = 44.3 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 82/294 (27%), Gaps = 39/294 (13%) Query: 32 SYKSWAMSSRIRTTINGE-VITDGDISKRIALLKLQKINGELEKI----AVQELIVETLK 86 + + R TI GE +T D+++ I + ++ +++ A L+ E L Sbjct: 307 GFLKFLEDKRPLATIKGEKPVTVADLAEAIRMKFYHGVDMAIDQKKVNKAKDSLLFEILA 366 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 + IEK G + + + A I+ Sbjct: 367 TRAIEKEGRDKGFDKKKEYLDKVA--------------------------DYQESVIFGH 400 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V+ E ++ A + K+ ++ + D + R Sbjct: 401 FVEKVIRPDVKVTEDDLKAYYEAHKSEYSYPIMVVLDGIAFNDQNAAQSAAEKLRQGMDF 460 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG 266 + + + + + L ++ +Q Y G Sbjct: 461 KWFKENAEGHVDAKAAGVIQFEDVP-----VTLKTLPEGLNKVITGAQTGEYRVYSDPNG 515 Query: 267 V-EYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 I + + + ++A + ++ K E+ KLR + + + Sbjct: 516 FTYVILVRNVIPEQVQPFPEVEAAIRKNVQSEQLNKLVVEWADKLRKASDVKIF 569 >gi|296417433|ref|XP_002838362.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634291|emb|CAZ82553.1| unnamed protein product [Tuber melanosporum] Length = 195 Score = 44.3 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 7/65 (10%), Positives = 18/65 (27%), Gaps = 1/65 (1%) Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKG 266 R R + + G + ++ +F+ + ++ T G Sbjct: 128 IRDRSTSLADLAVVESDCSSARKRGDLGFFGRGEMQKEFEEAAFALRPGDMSHAVETASG 187 Query: 267 VEYIA 271 + I Sbjct: 188 IHLIE 192 >gi|260753024|ref|YP_003225917.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552387|gb|ACV75333.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 642 Score = 44.3 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 14/255 (5%), Positives = 58/255 (22%), Gaps = 7/255 (2%) Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN-TGLSAEDF 120 L + +L ++++ + + + L+ Sbjct: 147 LAQQHMTADQLRSDIAEDMVRRQILIPIVAGLKTPNAMAEPFARMLIQRHEGMILAIPTT 206 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + D + + + + E+ + ++ + Sbjct: 207 VMPPSDKAPDDKAIADFYKSHIERYTLPEQRVIRYALVKPDEVKPTEAQIADYFKSHASE 266 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY--LL 238 + + Q + + + D+ +G Sbjct: 267 YA--ATEKRDLSQIILPDKAAAEALLAKIHGGLNFVAAAKTVGFSSEDIRLGALSKEQYS 324 Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI--CDKRDLGGEIALKAYLSAQNTPTK 296 E +N + G + + +++ ++ ++ Q + + Sbjct: 325 EKASPEAANAAFSLGDGAVSNVLHSPLGWHIVHVDKIERKPAATLDQMRGEITRQLSESL 384 Query: 297 IEKHEAEYVKKLRSN 311 K + +++ N Sbjct: 385 TSKAMTAKINRIQDN 399 >gi|62946413|ref|YP_227618.1| hypothetical protein all7316 [Nostoc sp. PCC 7120] gi|17134515|dbj|BAB77074.1| all7316 [Nostoc sp. PCC 7120] Length = 263 Score = 44.3 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 11/147 (7%), Positives = 29/147 (19%), Gaps = 5/147 (3%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + ++ +L R L + K+ Sbjct: 100 EKFKQINWRHQLESYFLKRKKYLDRVIYSLIQTENKSVVNELFFRIAEGEDSFAELARKY 159 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + G + + P F L P + + + Sbjct: 160 SQGAEADRGGIIGPVELGSITPNFAQLLYTSQVGVVQPPVAFGNTWVIVRVEKLIPAQLD 219 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++ + E + + +L Sbjct: 220 ----DFMRQRLLQENFEDWFQQQLNQL 242 >gi|116621076|ref|YP_823232.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Solibacter usitatus Ellin6076] gi|116224238|gb|ABJ82947.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Solibacter usitatus Ellin6076] Length = 850 Score = 44.3 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 7/98 (7%), Positives = 21/98 (21%), Gaps = 1/98 (1%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257 + + + + G + S L + + + Sbjct: 36 AEESARVRAQLANGADFAVLAREKSVDATSLDGGLLGNVDPSTLREEIRTALQGLAPGQI 95 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 + + G + + +L G + A Sbjct: 96 SPVFRLPTGFAIVKVLAPDELAGIAEFQRSRQAAIRAE 133 >gi|332705576|ref|ZP_08425652.1| hypothetical protein LYNGBM3L_11830 [Lyngbya majuscula 3L] gi|332355368|gb|EGJ34832.1| hypothetical protein LYNGBM3L_11830 [Lyngbya majuscula 3L] Length = 260 Score = 44.3 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 22/240 (9%), Positives = 67/240 (27%), Gaps = 18/240 (7%) Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 + K +L+ ++ + L + + + +E++ +N A D ++ Sbjct: 16 EFLKREIQLKDVSEKILYQKVINRAAVERNLTVTAEEIQEEADKFRHQNRLEKASDTLAW 75 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 L I + ++ + Q + + K+ F + ++ + + + L + + Sbjct: 76 LADNMITSDDWEAGIRQQLLAKKLSKSLF-------DKDVEKFFGQNRLDFDQILLYQII 128 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL- 242 + + +K +K + + G L +L Sbjct: 129 VANEKLSKELFYQIEEK----------EISFYQAAHIYDIDEQRRQKCGFEGKLYRWNLR 178 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 + NP T +G + + + + + + Sbjct: 179 PDIAAIVFGVPIGQVVNPVKTPQGYHILMVERFIPAELTPERYDEILDRLFQDWLNRELN 238 >gi|15618966|ref|NP_225252.1| hypothetical protein CPn1058 [Chlamydophila pneumoniae CWL029] gi|15836589|ref|NP_301113.1| hypothetical protein CPj1058 [Chlamydophila pneumoniae J138] gi|16753058|ref|NP_445331.1| hypothetical protein CP0792 [Chlamydophila pneumoniae AR39] gi|33242430|ref|NP_877371.1| hypothetical protein CpB1100 [Chlamydophila pneumoniae TW-183] gi|14195533|sp|Q9Z6K1|Y1058_CHLPN RecName: Full=Protein CPn_1058/CP_0792/CPj1058/CpB1100; Flags: Precursor gi|4377393|gb|AAD19195.1| CT355 hypothetical protein [Chlamydophila pneumoniae CWL029] gi|7189707|gb|AAF38591.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39] gi|8979431|dbj|BAA99265.1| CT355 hypothetical protein [Chlamydophila pneumoniae J138] gi|33236941|gb|AAP99028.1| hypothetical protein CpB1100 [Chlamydophila pneumoniae TW-183] Length = 363 Score = 44.3 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 95/302 (31%), Gaps = 34/302 (11%) Query: 34 KSWAMSSRIRTTINGE-VITDGDISKRIALL-------------KLQKINGELEKIAVQE 79 A+ RI ++ E V+T D+ ++ LL + + + ++ Sbjct: 49 SGLAIHDRILFKVDEENVVTALDVIHKLNLLFYNSYPHLIDSFPARSQYYTAMWPVVLES 108 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 +I E L + + I D VN + ++ F N + L Sbjct: 109 VIDEFLMVADAKAKRIATDPTAVNQEIEEMFGRDLSPL--YAHFEMSPNDIFNVIDRTLT 166 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 Q + +V++ MLK +I +K++ R+ + + + +I N + Sbjct: 167 AQRVMGMMVRSKVMLKVTPG--KIREYYRKLEEEASRKVIWKYRVLTIKANTESLASQIA 224 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259 +++ KD + G+ E + K + + Sbjct: 225 DKVRARLNEAKTWDKDRLTALVIS------QGGQLVCSEEFSRENSELSQSHKQELDLIG 278 Query: 260 --------PYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLR 309 P + G + + DK E +++ + + E E +Y +LR Sbjct: 279 YPKELCGLPKAHKSGYKLYMLLDKTSGSIEPLDVMESKIKQHLFALEAESVEKQYKDRLR 338 Query: 310 SN 311 Sbjct: 339 KR 340 >gi|225848384|ref|YP_002728547.1| hypothetical protein SULAZ_0557 [Sulfurihydrogenibium azorense Az-Fu1] gi|225644127|gb|ACN99177.1| hypothetical protein SULAZ_0557 [Sulfurihydrogenibium azorense Az-Fu1] Length = 456 Score = 44.3 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 40/338 (11%), Positives = 99/338 (29%), Gaps = 35/338 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M +K+ S I L T F + IV ++ YK +NG I + + Sbjct: 1 MFTKIAGSKWKNIVLYITAFAFVATSIVAVIIYKLSGEIYG-AAEVNGREIPMYEFNYTY 59 Query: 61 ALLKLQKINGELE---------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--VQH 109 ++ N +++ K A++ LI L QE EK GI V + Sbjct: 60 EMIGRNLQNQDIDITPFKKEIAKQAIETLIENELLYQEAEKEGIVATKEQVKEELLNIPA 119 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + G ++ + + + + I + +++ + + E+ +K Sbjct: 120 FQVNGKFDKNTYIQIINSLGLTPEGFESILQKQITVNNLRSILLSTLYVSDEEVETFTKK 179 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 E + +++ + + + + ++ + K + ++ Sbjct: 180 QLTRISGEVTLIKPKEPTITDQMIKDYYEKHKSDYTVKEGKKVEIYKIDINKLGQEKAEI 239 Query: 230 SIGKAQYLLE----SDLHPQFQNLLKKSQNNTTNPY------------------VTQKGV 267 + +++ + + + P T G Sbjct: 240 IAKDLFTKAKTGNITNIPQEVEKIFDGEVYEDKKPENVPQDVLSLSKDKKVSFSKTNDGY 299 Query: 268 EY-IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 I D +K ++ + + +K + Sbjct: 300 YIGIYKGDVSQSKPFEEIKTEITEKLKRQEYQKVVDQL 337 Score = 36.2 bits (81), Expect = 7.0, Method: Composition-based stats. Identities = 23/274 (8%), Positives = 58/274 (21%), Gaps = 15/274 (5%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 ++D ++ + + I + + K EK + + Sbjct: 168 VSDEEVETFTKKQLTRISGEVTLIKPKEPTITDQMIKDYYEKHKSDYTVKEGKKVEIYKI 227 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK---------YGNLEM 161 L E Q + + K + Sbjct: 228 DINKLGQEKAEIIAKDLFTKAKTGNITNIPQEVEKIFDGEVYEDKKPENVPQDVLSLSKD 287 Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 + + + + Y + KR + + Sbjct: 288 KKVSFSKTNDGYYIGIYKGDVSQSKPFEEIKTEITEKLKRQEYQKVVDQLHKTTDITALL 347 Query: 222 FASKIHDVSIGKAQ----YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + I + ++ + T+ P T++GV + + Sbjct: 348 SNNPVEKNQISDMTIQEFVVKYGVKADSLSSITRLKVGETSKPINTEEGVLIFKLSQLTE 407 Query: 278 LGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + +K + K YV L+ Sbjct: 408 PDKDKMEEMKKTIVPMIKAQKFNDIYKMYVDNLK 441 >gi|189188062|ref|XP_001930370.1| peptidyl-prolyl cis-trans isomerase pin4 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|330922090|ref|XP_003299691.1| hypothetical protein PTT_10742 [Pyrenophora teres f. teres 0-1] gi|187971976|gb|EDU39475.1| peptidyl-prolyl cis-trans isomerase pin4 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|311326516|gb|EFQ92203.1| hypothetical protein PTT_10742 [Pyrenophora teres f. teres 0-1] Length = 125 Score = 44.3 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 28/85 (32%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A E K + + G + + L +F+ + + + + Sbjct: 42 EKHSKKEEALEKLRNGAKFDEVAREMSED-KARQGGSLGWKVRGSLMQEFEKVAYELEPS 100 Query: 257 TTNP-----YVTQKGVEYIAICDKR 276 TT T +G + + ++ Sbjct: 101 TTGSPKIGEVKTSEGYHIVMVEGRK 125 >gi|302036376|ref|YP_003796698.1| putative peptidyl-prolyl cis-trans isomerase D (fragment) [Candidatus Nitrospira defluvii] gi|300604440|emb|CBK40772.1| putative Peptidyl-prolyl cis-trans isomerase D (fragment) [Candidatus Nitrospira defluvii] Length = 232 Score = 44.3 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 18/160 (11%), Positives = 52/160 (32%), Gaps = 12/160 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKR 59 M + + D+ L + L+ V + + + SS + ++ +V+ + + Sbjct: 1 MIKLLREAAHDYPWFLKSIMGLLALAFVITMGWWGFGQSSGNVVASVGDQVVPLDEYRRA 60 Query: 60 IALL--------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ--- 108 + + L++ +++LI + ++ G+T + +Q Sbjct: 61 YENTYRFYKDKGQNDIKDEFLKQFVLEQLIDNRMWLHVAKEMGLTVSDEDLRKAIMQRTE 120 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 +N + + L + F+ A + Sbjct: 121 FQKNGSFDPDAYKRLLSANRLTPASFEAMEAKDILTNKAR 160 >gi|227554800|ref|ZP_03984847.1| peptidylprolyl isomerase [Enterococcus faecalis HH22] gi|227176099|gb|EEI57071.1| peptidylprolyl isomerase [Enterococcus faecalis HH22] gi|315166858|gb|EFU10875.1| putative foldase protein PrsA [Enterococcus faecalis TX1341] gi|315575314|gb|EFU87505.1| putative foldase protein PrsA [Enterococcus faecalis TX0309B] gi|315581481|gb|EFU93672.1| putative foldase protein PrsA [Enterococcus faecalis TX0309A] Length = 362 Score = 44.3 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 29/314 (9%), Positives = 75/314 (23%), Gaps = 39/314 (12%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K + +L + + S + + S+ T+ G IT D +I Sbjct: 19 KRMKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTS 71 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A ++++ + +++ D ++ E Sbjct: 72 QQAFSQMVIYKVFEEKYGDKVTDKD-------IQKNFDEAKEQVEAQGGKFSDALKQAGL 124 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 ++ Q + ++ + I Sbjct: 125 TEKTFKKQLKQRAAYDAGLKAHLKITDEDLKTAW--------ASFHPEVEAQIIQVASED 176 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLK 251 + V+K E EK GK ++ ++ P + K Sbjct: 177 DAKAVKK------EITDGGDFTKIAKEKSTDTATKKDGGKIKFDSQATTVPAEVKEAAFK 230 Query: 252 KSQNNTTNPYVTQK------GVEYIAICDKRDLGGE-IALKAYLSAQNTPTKI--EKHEA 302 + P + + + G + + + TK+ + + Sbjct: 231 LKDGEVSEPIAATNMQTYQTTYYVVKMTKNKAKGNDMKPYEKEIKKIAEETKLADQTFVS 290 Query: 303 EYVKKLRSNAIIHY 316 + + A + Sbjct: 291 KVISDELKAANVKI 304 >gi|126641683|ref|YP_001084667.1| peptidyl-prolyl cis-trans isomerase precursor [Acinetobacter baumannii ATCC 17978] gi|126387567|gb|ABO12065.1| peptidyl-prolyl cis-trans isomerase precursor [Acinetobacter baumannii ATCC 17978] Length = 286 Score = 44.3 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 20/195 (10%), Positives = 45/195 (23%), Gaps = 6/195 (3%) Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 L+ + Q + + + S ++ + + +K Sbjct: 79 SLVSKVDLMQIANLQTEQRTLHLASIKLDPYKTGLTASNQEATDYYNKHQNEFKQPASVD 138 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + + + A + + + R V + ++ Sbjct: 139 VDYVVLSPSLMAKPAPATDAELKQAYAKFVETQQKDAK----RIVKHILITTDARDDAAA 194 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256 QK KD +F+ G + F + +L Sbjct: 195 QKLAKDVYAKIQGGLSFAQAAAQFSEDPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQ 254 Query: 257 TTNPYVTQKGVEYIA 271 + P TQ G I Sbjct: 255 ISQPVKTQYGYHIIE 269 >gi|283856265|ref|YP_162202.2| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis subsp. mobilis ZM4] gi|283775260|gb|AAV89091.2| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis subsp. mobilis ZM4] Length = 642 Score = 44.3 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 14/255 (5%), Positives = 58/255 (22%), Gaps = 7/255 (2%) Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN-TGLSAEDF 120 L + +L ++++ + + + L+ Sbjct: 147 LAQQHMTADQLRSDIAEDMVRRQILIPIVAGLKTPNAMAEPFARMLIQRHEGMILAIPTT 206 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + D + + + + E+ + ++ + Sbjct: 207 VMPPSDKAPDDKAIADFYKSHIERYTLPEQRVIRYALVKPDEVKPTEAQIADYFKSHASE 266 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY--LL 238 + + Q + + + D+ +G Sbjct: 267 YA--ATEKRDLSQIILPDKAAAEALLAKIHGGLNFVAAAKTVGFSSEDIRLGTLSKEQYS 324 Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI--CDKRDLGGEIALKAYLSAQNTPTK 296 E +N + G + + +++ ++ ++ Q + + Sbjct: 325 EKASPEAANAAFSLGDGAVSNVLHSPLGWHIVHVDKIERKPAATLDQMRGEITRQLSESL 384 Query: 297 IEKHEAEYVKKLRSN 311 K + +++ N Sbjct: 385 TSKAMTAKINRIQDN 399 >gi|256959822|ref|ZP_05563993.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis Merz96] gi|256950318|gb|EEU66950.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis Merz96] Length = 342 Score = 44.3 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 25/313 (7%), Positives = 78/313 (24%), Gaps = 41/313 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + + S + + S+ T+ G IT D +I + Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A ++++ + +++ + + + E + Sbjct: 54 AFSQMVIYKVFEEKYGD-------KVTDKAIQKKFDDAKKQVEAQGGKFSDALTQAGLTE 106 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + ++ + ++ + + Q Sbjct: 107 KSFKKQLKQAEAMQVGLKDHLKITDEDLKTAWASFHPEVEAQII---------------Q 151 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQF--QNLLKK 252 + K ++ + + GK ++ +S P + K Sbjct: 152 VASEDDAKAVKKEITDGGDFAKIAKDKSTDAATKKDGGKIKFDSQSTTVPAEVKEAAFKL 211 Query: 253 SQNNTTNPYVTQKG------VEYIAICDKRDLGGE-IALKAYLSAQNTPTKI--EKHEAE 303 + P + + + G + + + TK+ + +A+ Sbjct: 212 KDGEVSEPIAATNAQTYQTTYYVVKMTKNKAKGNDMKPYEKEIKKIAEETKLADQTFQAK 271 Query: 304 YVKKLRSNAIIHY 316 + A + Sbjct: 272 VISDELKAANVKI 284 >gi|75910227|ref|YP_324523.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anabaena variabilis ATCC 29413] gi|75703952|gb|ABA23628.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anabaena variabilis ATCC 29413] Length = 260 Score = 44.3 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 14/230 (6%), Positives = 46/230 (20%), Gaps = 1/230 (0%) Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 I + + + A E + Sbjct: 24 QIGNRTIQASELIPLLANYQLLPQLLRELIIDEAIAAVECKPEELAQAKQRFYADKQLAQ 83 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + + + + + + L Sbjct: 84 ETDIQAWLVQQGLSAEQLDNIIVRKIKLEKYKQATWGAKLESYFFQLKAKLDKVIYSLLR 143 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKS 253 + + + +K++ + G + +S L Q L Sbjct: 144 TQDPGLAQELYFRLQAKEQSFAEVAQKYSQGPESQTGGLVGPVEQSSLHPAMVQLLSNCQ 203 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 ++P + + + + +KA L + +++ + + Sbjct: 204 PGQISSPSRIAEWYVIVRVEKFIPAQLDEPMKARLLNELFEGWMQEKQRQ 253 >gi|220925415|ref|YP_002500717.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium nodulans ORS 2060] gi|219950022|gb|ACL60414.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium nodulans ORS 2060] Length = 632 Score = 43.9 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 7/88 (7%), Positives = 22/88 (25%), Gaps = 7/88 (7%) Query: 233 KAQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYL 288 S+L Q + P + G + + + + + Sbjct: 315 DLGTFSRSELFDPAVADAAFGLQQGVVSEPVKGRFGTVLLRVTAIEPGSVKPYEEVAGQI 374 Query: 289 SAQNTPTKIEKHEA---EYVKKLRSNAI 313 + + + + ++ R+ A Sbjct: 375 RTEIARERAGDNLEKVHDAIEDQRAGAK 402 >gi|126656393|ref|ZP_01727654.1| hypothetical protein CY0110_21857 [Cyanothece sp. CCY0110] gi|126622079|gb|EAZ92786.1| hypothetical protein CY0110_21857 [Cyanothece sp. CCY0110] Length = 247 Score = 43.9 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 17/222 (7%), Positives = 56/222 (25%), Gaps = 2/222 (0%) Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 AV+E+I E ++ + + + + A + E + + + Sbjct: 8 AVEEIIKEIKLSGKMREITEGLMNRRIITQEAERANIKVETEELQQAADQFRLRHNLESA 67 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + DF + K + + + ++ Sbjct: 68 DQTHQWLTRSQLSIEDFEEILHFSIISGKLAKNLFDDKVEPYFYQNQLNYTEVIMYEIIL 127 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQF-QNLLKKS 253 ++ + ++ I G + +L P+ + + Sbjct: 128 DDEDLAMELYYAIDENEISFWDVAHQYIQDIELRRKGGYLGSVKRQELKPEISAAIFAAN 187 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 P +T +G+ + + + + + + + Sbjct: 188 PPQLLKPIMTSQGIHLVFVEEIIQPELDEKKRHKILSDLFSE 229 >gi|325202068|gb|ADY97522.1| conserved hypothetical protein [Neisseria meningitidis M01-240149] Length = 512 Score = 43.9 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 33/309 (10%), Positives = 82/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I+D I+ I + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 G Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-DGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ + + + ++N + + + + + Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLV--NLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKVSEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + N KA + + K + Sbjct: 238 AFEERVARLPANEAKL-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLSDDAF 287 >gi|17228858|ref|NP_485406.1| hypothetical protein all1363 [Nostoc sp. PCC 7120] gi|17130710|dbj|BAB73320.1| all1363 [Nostoc sp. PCC 7120] Length = 242 Score = 43.9 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 14/189 (7%), Positives = 49/189 (25%), Gaps = 2/189 (1%) Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ-KMKNITV 175 E+ + + ++ + + + + ++++ KQ Sbjct: 47 PEELAQAKQRFYADKQLSQETDIQAWLVQQGLSAEQLDNIIVRKIKLEKYKQATWGAKLE 106 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 + L + + + +K++ + G Sbjct: 107 SYFFQLKAKLDKVIYSLLRTQDPGLAQELYFRLQAKEQSFAEVAQKYSQGPESQTGGLVG 166 Query: 236 YLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 + +S L Q L + P + + + + +KA L + Sbjct: 167 PVEQSSLHPAMVQLLSSCQPGQISPPTRITEWYVIVRVEKFIPAQLDEPMKARLLNELFE 226 Query: 295 TKIEKHEAE 303 +++ + + Sbjct: 227 GWMQEQQRQ 235 >gi|313124214|ref|YP_004034473.1| parvulin-like peptidyl-prolyl isomerase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280777|gb|ADQ61496.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 311 Score = 43.9 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 29/307 (9%), Positives = 72/307 (23%), Gaps = 33/307 (10%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN--GEVITDGDISKRIALLKLQKINGEL 72 + + + + + A SS T +N G IT + + + Sbjct: 1 MKKHLKKIAVLAGAAAIGLSTAACSSSSATVVNYKGGKITQDEYYEAMKDTSA------- 53 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+ K + + N + + + + +S Sbjct: 54 GQSTLVSLIIYRTLKAQYGDKVSSKKINAEYNKYKKQYSSNFSTVLSYSGLT-------- 105 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + + T + Sbjct: 106 --TKSFKQNLATNLYSVAALKDLKKPTTTQEKNWWKSYHTKTT------VQHIVVDKKST 157 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 + + + + + +K A K+ + + K Sbjct: 158 AETVIKKLKSGTSFATLAKKYSTDTATKKKAGKMAAFDSTD-----TNLSSTFKSAVWKL 212 Query: 253 SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT--KIEKHEAEYVKKLR 309 + T P T G E I + + G K+++ Q + + K+ Sbjct: 213 KEGEYTTTPVKTSSGYEVIKVLKTTEKGSYTKNKSFIDKQLYAKWAADSNTMTKIISKVL 272 Query: 310 SNAIIHY 316 A ++ Sbjct: 273 KKANVNI 279 >gi|239630128|ref|ZP_04673159.1| ase protein prsA [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067278|ref|YP_003789301.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus casei str. Zhang] gi|239527740|gb|EEQ66741.1| ase protein prsA [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439685|gb|ADK19451.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus casei str. Zhang] Length = 299 Score = 43.9 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 86/286 (30%), Gaps = 36/286 (12%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K+ + ++S + + T +G +T+ K + Sbjct: 4 KMRLKVLLASTATAFLLLSGCQSNQADQTVATYSGGKVTESSFYKELK-------QSPTT 56 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 K + +++ K + + TVN + + + G E+F +FL + G + Sbjct: 57 KTMLANMLIYRALNHAYGK---SVSTKTVNDAYDSYKQQYG---ENFDAFLSQNGFSRSS 110 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 FK+ L + +K K +++ + ++ +L S D Q Sbjct: 111 FKESLRTNFLSEVALKKL--KKVSESQLKAAWKTY------QPKVTVQHILTSDEDTAKQ 162 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLES-DLHPQFQNLLK 251 + + + + GK + + L F++ Sbjct: 163 VISDLAA-----------GKDFATLAKTDSIDTATKDNGGKISFESNNKTLDATFKDAAY 211 Query: 252 K-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 K + T P G E I + + G + K L+A Sbjct: 212 KLKNGDYTQTPVKVTDGYEVIKMINHPAKGTFTSSKKALTASVYAK 257 >gi|332654773|ref|ZP_08420515.1| putative mucin-2 (MUC-2) (Intestinal mucin-2) [Ruminococcaceae bacterium D16] gi|332516116|gb|EGJ45724.1| putative mucin-2 (MUC-2) (Intestinal mucin-2) [Ruminococcaceae bacterium D16] Length = 426 Score = 43.9 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 24/329 (7%), Positives = 75/329 (22%), Gaps = 62/329 (18%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDI-----------SKRIALLKLQKI----------- 68 + + T+ IT + ++ A++ + Sbjct: 48 FLSTAGLSGDTVVATVGDTEITADSLLYWLAATVDGTAQYYAMMGMSASDLPWDTEMEDG 107 Query: 69 --------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 N L+ A+ L+ + Q+ S + T+ A+ G A Sbjct: 108 STMAEGFLNNALQTAALYALVP--VIAQQEGLSVSDESAQTIQQAIDSFAQQAGGDAMVD 165 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 D + + A + ++ + + + N+ + Sbjct: 166 HMLWSSVLTRDLYTRMMQAGD-LNTQLMNRYYGDGAPDAPKDADILTYVSDNLQIAYKAK 224 Query: 181 RTVLFSIPDNK------------------------LQNQGFVQKRIKDAEESRLRLPKDC 216 +L ++ +K + +++ + + Sbjct: 225 HILLKTVDTSKPIKDADGKATGEYEPLDDATVAQKKATAEDILAQLQATSDKEALFDELM 284 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275 + + +V+ + F+ + + G I Sbjct: 285 KEYSEDTDSSGNVNSPDGYEAKSGQMVAAFEEAALALQPGEISGIVESPYGYHIIL---- 340 Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 R + + + + ++ Sbjct: 341 RLPIQAADYRDQYVSYLMSQRQQGWLEQF 369 >gi|261378747|ref|ZP_05983320.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria cinerea ATCC 14685] gi|269144903|gb|EEZ71321.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria cinerea ATCC 14685] Length = 512 Score = 43.9 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 30/309 (9%), Positives = 78/309 (25%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V S + E I+D I+ + + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGSDYIVQVGDEKISDHSINTAMQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 K Q L+ KQ + GI+ + V + + L Sbjct: 61 A-KGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSQEQIKQIIVDDPNFHDAGGKFSHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + + + + ++N + + + + + Sbjct: 120 SQYLSQRHMSEDQFVEEIRDQFALQNLV--NLVQNGVLVSDAQAEQLVKLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIGQVKAADADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 ++ + + + KA + + K + Sbjct: 238 AYEERMARLPAE-------------------GEKLSFEKEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|255004191|ref|ZP_05278992.1| peptidyl-prolyl cis-trans isomerase D (ppiD) [Anaplasma marginale str. Virginia] Length = 630 Score = 43.9 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 25/382 (6%), Positives = 94/382 (24%), Gaps = 84/382 (21%) Query: 10 SDFI-KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-------- 60 + F+ +L +F V S R + ++ + S Sbjct: 5 NVFVGAVLAAVLCAFVFVTFGSVLPFGGTASDRCVAKVGSSCLSLREYSMAYRGELSYIE 64 Query: 61 ----ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 L + ++++ + ++ + + ++ ++ + + ++ S Sbjct: 65 SLVHQKLSEDDMRFGVKEMTLSRMVDDMVLEKFAKELNLRVSNKSIRDLIGDMPMFQDKS 124 Query: 117 AEDFS--------------------------------SFLDKQGIGDNHFKQYLAIQSIW 144 + + G + + A + Sbjct: 125 GKLDEQRFKDLLADAGMTEASYIGKVRGSLPAFVLSECIFPRSGEVYSQYYDGFAQDVLR 184 Query: 145 PDVVKNDFM------------LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK- 191 + + ++E N+ + + ++ Sbjct: 185 GIMQSRTVDIVEISQSAVENTSTPTDSDLEAMYNEGTKNGELIMPEYRSAEYMIVSEDDA 244 Query: 192 ------LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG--------KAQY- 236 ++ + + + + R L + ++ + G Sbjct: 245 LDEVTASNDEVESEIKNSELHDQRDVLNLVFPSESEASAAYKAIKEGKAFEAVVKDLGTT 304 Query: 237 --------LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALK 285 + + L + +N + ++ + + + G + I K + + LK Sbjct: 305 VEEVTLRNVTKELLPIEVRNTVFDLNEGEVSGVFRSVVGWHVMKILSKHPISAKDLKKLK 364 Query: 286 AYLSAQNTPTKIEKHEAEYVKK 307 ++ K + + ++K Sbjct: 365 EKVAMSIKRQKARELFSASIRK 386 >gi|168335025|ref|ZP_02693139.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type [Epulopiscium sp. 'N.t. morphotype B'] Length = 525 Score = 43.9 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 24/271 (8%), Positives = 67/271 (24%), Gaps = 23/271 (8%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGEL--------EKIAVQELIVETLKKQEIE 91 + + TI+ I + I + +L + + I E K ++ Sbjct: 64 NDLVATIDDVKINES-IYRAYLWSAQSAFEMQLGMDMGIMKDMEIEGQTIGEIAKDNALK 122 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 + +N L+ + + G+ Q + ++ + Sbjct: 123 SVALAIITNNKADEMDLKLTADELALIEADASTFIDINGEIAKLHGFTKQDVIDLLIGAE 182 Query: 152 FMLKYG-------NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK-----LQNQGFVQ 199 K E + ++ + + R +L D + + Sbjct: 183 LSDKVQRALSETYMPAEEEINERVELAKPSYEKVTARHILIGTVDETGAPVSDEVKAEKL 242 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--T 257 + + +++ + ++ P+F+ + + Sbjct: 243 ALANELLDRIKAGEDIGKXAAEYSEDPGSKATNGEYTFGRGEMVPEFEAAAFDNADGAIW 302 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 P T G D + + Y+ Sbjct: 303 AEPVETSYGYHIGQTIDHIEADEDAIRDEYI 333 >gi|323341667|ref|ZP_08081900.1| hypothetical protein HMPREF0357_10080 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464092|gb|EFY09285.1| hypothetical protein HMPREF0357_10080 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 322 Score = 43.9 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 10/119 (8%), Positives = 37/119 (31%), Gaps = 2/119 (1%) Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 +E ++ + ++ + + + D+ +++ + + Sbjct: 144 ILGDYLEANYDQYAKAFVEEKQPRVVSHILVKMDDSKNPTAEETAKMEKIDAALKEGKAF 203 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESD--LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272 + +F+ + G Y+ ++ + + + TT +Q G I + Sbjct: 204 SDVAMEFSDDGTAQNGGLLGYMDKTSSLVPEFIEGATSIKKGETTGWVTSQYGRHRITV 262 >gi|221046455|pdb|2JZV|A Chain A, Solution Structure Of S. Aureus Prsa-Ppiase Length = 111 Score = 43.9 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 24/81 (29%), Gaps = 2/81 (2%) Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNL-L 250 ++ QK + +E K +K + G+ Y+L+ F+ Sbjct: 28 DDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKALF 87 Query: 251 KKSQNNTTNPYVTQKGVEYIA 271 K + + G I Sbjct: 88 KLKDGEVSEVVKSSFGYHIIK 108 >gi|218245405|ref|YP_002370776.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cyanothece sp. PCC 8801] gi|257058441|ref|YP_003136329.1| parvulin-like peptidyl-prolyl isomerase-like protein [Cyanothece sp. PCC 8802] gi|218165883|gb|ACK64620.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cyanothece sp. PCC 8801] gi|256588607|gb|ACU99493.1| parvulin-like peptidyl-prolyl isomerase-like protein [Cyanothece sp. PCC 8802] Length = 249 Score = 43.9 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 20/264 (7%), Positives = 70/264 (26%), Gaps = 31/264 (11%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 + I + +++ D+ L L ++A + +I + + + D Sbjct: 2 TVVLQIGDQELSEPDL------YPLLAQYKLLPQLAKEIIIDQAI---------ASIDCT 46 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + + + + + + + V++ + K+ L Sbjct: 47 PEEETLGRQQFYQKHQIANETQLQE------WVKYHGITPEQLAHLTVRDIKLEKFKKLT 100 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E +K+ + ++ +++ + Q + Sbjct: 101 WEHQLESYFLKSKGKLDRVVYSLIRTKDPGIAQE---------LYFRIAEGESSFTELAK 151 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 +++ + G + + HP + + P+ + + + Sbjct: 152 QYSQGAEAQTGGLIGPVELNVPHPTISQILSTSQPGQLSPPHRVGEWFVILRLEKYLTAQ 211 Query: 280 GEIALKAYLSAQNTPTKIEKHEAE 303 + A K L + + + Sbjct: 212 LDEATKGRLLNELFQEWLSNELKK 235 >gi|313206481|ref|YP_004045658.1| ppic-type peptidyl-prolyl cis-trans isomerase [Riemerella anatipestifer DSM 15868] gi|312445797|gb|ADQ82152.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Riemerella anatipestifer DSM 15868] gi|315023578|gb|EFT36582.1| Peptidyl-prolyl cis-trans isomerase [Riemerella anatipestifer RA-YM] gi|325336073|gb|ADZ12347.1| Peptidyl-prolyl cis-trans isomerase, PpiC-type [Riemerella anatipestifer RA-GD] Length = 708 Score = 43.9 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 76/251 (30%), Gaps = 10/251 (3%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING- 70 +I + L+ F + P K + I +NGE IT + ++++ L++ Q + Sbjct: 12 WILIGFIAIALLAFLVNPDSLDKVFGKDPNILGKVNGEEITRDEYNEQLMLMRNQAESQG 71 Query: 71 ----ELEKIAVQELIVETLKKQEIEKSGITF--DSNTVNYFFVQHARNTGLSAEDFSSFL 124 LE+ A Q L+ L KQ+ EK G+ D + + + +F Sbjct: 72 QPLVGLEEQAWQTLVQSKLIKQQFEKMGLELTEDFFWNQLQYDPMFSQNPQNFDAKGNFK 131 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + + + + + M ITV + ++ Sbjct: 132 LTEIKKEIEGLRESGRVQEYNQWLN--IRKTIEYRMMARQLFANVTNGITVGKKEAELIM 189 Query: 185 FSIPDNKLQNQGFVQKRIKDAEE-SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 + + + + ++ N ++K + +L Sbjct: 190 KNRDQVADIDFVKIDYNTFAQKNPVKVTSEDLANFIKKHPVAFKAEASRNLGVVLFPAKP 249 Query: 244 PQFQNLLKKSQ 254 + L + Sbjct: 250 SAIDDSLTLKE 260 Score = 40.4 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 85/283 (30%), Gaps = 19/283 (6%) Query: 47 NGEVITDGDISKRIALLKLQKINGELEKI------AVQELIVETLKKQEIEKSGITFDSN 100 N +T D++ I + + A I ++L +E+ K N Sbjct: 212 NPVKVTSEDLANFIKKHPVAFKAEASRNLGVVLFPAKPSAIDDSLTLKELRKLYNGEGEN 271 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +N + + E S K G A + V + + Sbjct: 272 FLNSP------SDSMFVEINSEAPVKYGFVSEQEVPQEAQAFVKTATVGQVYGPYKSGGK 325 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + K + + LI + + ++ K A+ ++ D K Sbjct: 326 YYVTKLAGKSEATLPKHILIAFAGTDVAKQDPSIKRTKEEAKKLADSIATQVKADPAKFT 385 Query: 221 KF----ASKIHDVSIGKAQYLLESD--LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274 +F A K G Q++L F + ++ + TQ G + + Sbjct: 386 QFVSFSADKGSAQQGGMLQWVLPGKSGFVKPFADWVESNPKGAVGVVETQFGYHVMVNEN 445 Query: 275 KRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKKLRSNAIIHY 316 K + L + A + T K+ ++++++ + + Sbjct: 446 KMPVYKIANLAKDIRASKETQNKVYAQANTFIQQIQGKSFNEF 488 >gi|169617421|ref|XP_001802125.1| hypothetical protein SNOG_11889 [Phaeosphaeria nodorum SN15] gi|160703405|gb|EAT80933.2| hypothetical protein SNOG_11889 [Phaeosphaeria nodorum SN15] Length = 592 Score = 43.9 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 28/85 (32%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + +DA K + + + G + + LH F+ + + + + Sbjct: 509 EKHSKKEDALRRLRDGEKFDVVASELSEDKRKQA-GSLGWKPRNTLHADFEKVAYELEPS 567 Query: 257 TT-----NPYVTQKGVEYIAICDKR 276 TT T+ G I + ++ Sbjct: 568 TTSNPKIGEVKTEHGYHIIMVEGRK 592 >gi|294900863|ref|XP_002777151.1| peptidylprolyl isomerase, putative [Perkinsus marinus ATCC 50983] gi|239884612|gb|EER08967.1| peptidylprolyl isomerase, putative [Perkinsus marinus ATCC 50983] Length = 219 Score = 43.9 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 16/153 (10%), Positives = 40/153 (26%), Gaps = 5/153 (3%) Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 F ++ + + + P K+ ++ + LE + K + + R Sbjct: 63 FYYFNVHTQQGQWEFPSTEVMPPTRRKSSYVYRMPELETAHVLHILKKHRGSRKPRSWRI 122 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD----CNKLEKFASKIHDVSIGKAQYLL 238 + + R + + L + + G + Sbjct: 123 DGEITLPVEEAIKELALIREEVVRQEPNGLAAMTKCFKDNARIESDCGTAKRGGDLGEIA 182 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + P F+ + + T+ GV I Sbjct: 183 RGRMQPSFEKVAFALPPGTLSPIIHTESGVHLI 215 >gi|294896512|ref|XP_002775594.1| peptidylprolyl isomerase, putative [Perkinsus marinus ATCC 50983] gi|294896514|ref|XP_002775595.1| peptidylprolyl isomerase, putative [Perkinsus marinus ATCC 50983] gi|239881817|gb|EER07410.1| peptidylprolyl isomerase, putative [Perkinsus marinus ATCC 50983] gi|239881818|gb|EER07411.1| peptidylprolyl isomerase, putative [Perkinsus marinus ATCC 50983] Length = 182 Score = 43.9 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 16/153 (10%), Positives = 40/153 (26%), Gaps = 5/153 (3%) Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 F ++ + + + P K+ ++ + LE + K + + R Sbjct: 26 FYYFNVHTQQGQWEFPSTEVMPPTRRKSSYVYRMPELETAHVLHILKKHRGSRKPRSWRI 85 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD----CNKLEKFASKIHDVSIGKAQYLL 238 + + R + + L + + G + Sbjct: 86 DGEITLPVEEAIKELALIREEVVRQEPNGLAAMTKCFKDNARIESDCGTAKRGGDLGEIA 145 Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 + P F+ + + T+ GV I Sbjct: 146 RGRMQPSFEKVAFALPPGTLSPIIHTESGVHLI 178 >gi|255595692|ref|XP_002536368.1| conserved hypothetical protein [Ricinus communis] gi|223519931|gb|EEF26015.1| conserved hypothetical protein [Ricinus communis] Length = 155 Score = 43.9 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 15/139 (10%), Positives = 44/139 (31%), Gaps = 1/139 (0%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAV 77 ++++ I+ + +++ +NG IT + + L ++ + + Sbjct: 4 VACIIVVALILGGCNKSQNVEDAQVLARVNGNDITIQQLHAELPNASLTLDK-QVGQQIL 62 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 LI L QE K + + A+ + + + + + Sbjct: 63 SRLIERQLLMQEAVKLNLDRTPEVMQALETSKAQIYAQAVIVKAIQSVDEMPMSSETAKL 122 Query: 138 LAIQSIWPDVVKNDFMLKY 156 +A + I ++ + Sbjct: 123 IATKLIGQQRKQDFIKGEV 141 >gi|191639211|ref|YP_001988377.1| peptidylprolyl isomerase [Lactobacillus casei BL23] gi|190713513|emb|CAQ67519.1| Foldase protein prsA precursor (Protease maturation protein prtM) [Lactobacillus casei BL23] gi|327383289|gb|AEA54765.1| Peptidyl-prolyl cis-trans isomerase [Lactobacillus casei LC2W] gi|327386472|gb|AEA57946.1| Peptidyl-prolyl cis-trans isomerase [Lactobacillus casei BD-II] Length = 299 Score = 43.9 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 83/286 (29%), Gaps = 36/286 (12%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K+ + + ++S + + T +G +T+ K + Sbjct: 4 KMRLKVLLASTATALLLLSGCQSNQADQTVATYSGGKVTESSFYKELK-------QSPTT 56 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 K + +++ KS T N + Q E+F +FL + G + Sbjct: 57 KTMLANMLIYRALNHAYGKSVNTKTVNDAYDSYKQQY------GENFDAFLSQNGFSRSS 110 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 FK+ L + +K K +++ + ++ +L S D Q Sbjct: 111 FKESLRTNFLSEVALKKL--KKVSESQLKAAWKTY------QPKVTVQHILTSDEDTAKQ 162 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLES-DLHPQFQNLLK 251 + + + + GK + + L F++ Sbjct: 163 VISDLAA-----------GKDFATLAKTDSIDTATKDNGGKISFESNNKTLDATFKDAAY 211 Query: 252 K-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 K + T P G E I + + G + K L+A Sbjct: 212 KLKNGDYTQTPVKVTDGYEVIKMINHPAKGTFTSSKKALTASVYAK 257 >gi|160878273|ref|YP_001557241.1| hypothetical protein Cphy_0113 [Clostridium phytofermentans ISDg] gi|160426939|gb|ABX40502.1| hypothetical protein Cphy_0113 [Clostridium phytofermentans ISDg] Length = 377 Score = 43.9 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 19/295 (6%), Positives = 71/295 (24%), Gaps = 23/295 (7%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGD----ISKRIALLKLQKING----------EL 72 I + + + T+N ++ + + R ++ Sbjct: 65 ITVVPEVPAQEKQGKTVLTVNNLTVSYEEAVLYLQSRKEEIEELYGKDVWSLVVDEDGTT 124 Query: 73 EKIAVQELIVET--LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + +++ + E K+ + + + ++ LD + Sbjct: 125 YEQLLKDSVYEEIEYLMLVCSKAEELGITLSEDELLDADEFTADFTSNFSPEALDYYNVN 184 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + + + ++ + + E+ + + Sbjct: 185 KGVVNKIYRDNMLANKIYESLTLNVDTEVSDELARQAVFQYILVGKYGYDANGNRIEY-- 242 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250 + + R E L + + ++V I + + D+ + + Sbjct: 243 TKEQLEESKTRAYKLREEALDAKNFYDFAAANSDDENEVEI----TVGKGDMKENLEKVA 298 Query: 251 KK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + ++ T G D + K + + + ++ Sbjct: 299 FALDEGEISDVIDTADGYFIFRCVSLLDRNATDSKKEDIIIKRQEEAFDVEYNKW 353 >gi|112148585|gb|ABI13575.1| protease maturation protein precursor [Lactobacillus helveticus CNRZ32] Length = 301 Score = 43.9 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 35/295 (11%), Positives = 74/295 (25%), Gaps = 43/295 (14%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 L + + T F L+ + A + + +T + K + Sbjct: 1 MNKLLKPLMMTVTGFSLLSLAGCSTSNNAEVAQYGK------NKKVTQEEFYKELKSSPS 54 Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 K + L+V K + K + E + S + Sbjct: 55 S-------KTVLANLLVYDALKAKYGKKLDIKKVDNEYES----------YKERYGSQFN 97 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + + + + + + + ++ A ++Y + Sbjct: 98 NFLVQGGYTRASFKRMIQINFLSRIALESQIKPTDKQLKAAW--------KDYQPSITVQ 149 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLES--DL 242 I V E + +K++ + GK + L Sbjct: 150 HILTTSKATAEQV-------IEQLNDGKSFSSLAKKYSVDSSTSNNGGKLAAFNQENKSL 202 Query: 243 HPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 F+N K T P G E I + D G + +A L+ + Sbjct: 203 DSTFKNAAYKLEDGEYTKTPVKVTDGYEVIKMVKHPDKGNFESNRAELTKELYNK 257 >gi|218202140|gb|EEC84567.1| hypothetical protein OsI_31339 [Oryza sativa Indica Group] Length = 649 Score = 43.9 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 6/51 (11%), Positives = 18/51 (35%), Gaps = 3/51 (5%) Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVT--QKG 266 ++++ G + + FQ++ + T+ P+ + G Sbjct: 103 AQEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTPVGATSAPFKSTVPFG 153 >gi|322412103|gb|EFY03011.1| foldase protein PrsA [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 354 Score = 43.9 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 29/309 (9%), Positives = 70/309 (22%), Gaps = 38/309 (12%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 ++ V ++ + ++ G+ I+ D I K Sbjct: 6 KLITGIVTLASVITLTACQSTNDNTKVVSMKGDTISVSDFYNEIK------NTEVSRKAM 59 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + LI + Q +K N Q+ + S + Sbjct: 60 LHLLIGRVFEAQYGDKVSNKEVEKAYNKTADQYGASFSGVLAQASLTPETY--------- 110 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 Q +V+ E+ + + + + V+ Sbjct: 111 --KKQIRSSKLVEYAVREAAK---KELTTKEYQKAYESYTPTMAAQVITL---------D 156 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 +K EE + ++ + K + + + Sbjct: 157 SEEKANHTLEEVKAEGADFATIAKEKTTSADKKVAYKFDSGTTTLPADVVKAASSLKEGE 216 Query: 257 TTNPYVT------QKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEK--HEAEYVKK 307 + Q I + K + + + L A K + + + + K Sbjct: 217 MSEVISVLDPTTYQNKFYIIKVNKKAEKKADWKVYQKRLKAIILAEKTKDVNFQNKIIAK 276 Query: 308 LRSNAIIHY 316 A + Sbjct: 277 ALDKANVKI 285 >gi|223040376|ref|ZP_03610651.1| WbnF [Campylobacter rectus RM3267] gi|222878334|gb|EEF13440.1| WbnF [Campylobacter rectus RM3267] Length = 487 Score = 43.9 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 21/272 (7%), Positives = 62/272 (22%), Gaps = 6/272 (2%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 +N E I ++ + + + + + I E+ + ++ + Sbjct: 111 VNDEDIVKYIVADQNFYVNGKFDKELYKNTLKRARITESEYEDSLKNVILLDKLRHALNL 170 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + L+A + + + + + + E ++ Sbjct: 171 PAKEQDINMLTASFLMQDKISMQVVEAATDEIKIDEDAVKKLWEERKNDYKTMTEFKLDT 230 Query: 166 NKQK---MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 T + + + + LE++ Sbjct: 231 KFIPTISSDANTTELMEFYNENKNEYKGSDDKIKEFEAVKDEVLKDYNLKQTKKVALEEY 290 Query: 223 ASKIHDVSIGKAQYLLESDLHP-QFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLG 279 D D L + +T P+ + G + + + + Sbjct: 291 LKIKKDEKQADISITTLEDNASLPIDELKSAKKGDTLKPFEYEDGYMIVKVKEIVAPRVM 350 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 K + K ++ K+L Sbjct: 351 SFDEAKDQILELYKEQKTQETVEAKAKELLEK 382 >gi|296313658|ref|ZP_06863599.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria polysaccharea ATCC 43768] gi|296839799|gb|EFH23737.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria polysaccharea ATCC 43768] Length = 512 Score = 43.9 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 29/309 (9%), Positives = 78/309 (25%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V S + E I+D I+ + + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGSDYIVQVGDEKISDHSINVTMQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 Q L+ KQ + GI+ + V + + L Sbjct: 61 A-AGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSQEQIKQIIVDDPNFHDAGGKFSHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + + + + ++N + + + + + Sbjct: 120 SQYLSQRHMSEDQFVEEIRDQFALQNLV--NLVQNGVLVSDTQAEQLVKLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKVSEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 ++ + + + KA + + K + Sbjct: 238 AYEERMARLPAE-------------------GEKPSFEKEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLGDDAF 287 >gi|56416723|ref|YP_153797.1| hypothetical protein AM516 [Anaplasma marginale str. St. Maries] gi|222475088|ref|YP_002563503.1| peptidyl-prolyl cis-trans isomerase D (ppiD) [Anaplasma marginale str. Florida] gi|56387955|gb|AAV86542.1| hypothetical protein AM516 [Anaplasma marginale str. St. Maries] gi|222419224|gb|ACM49247.1| peptidyl-prolyl cis-trans isomerase D (ppiD) [Anaplasma marginale str. Florida] Length = 670 Score = 43.9 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 28/383 (7%), Positives = 99/383 (25%), Gaps = 85/383 (22%) Query: 10 SDFI-KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR-------IA 61 + F+ +L +F V S R + ++ + S I Sbjct: 44 NVFVGAVLAAVLCAFVFVTFGSVLPFGGTASDRCVAKVGSSCLSLREYSMAYRGELSYIE 103 Query: 62 LLKLQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 L QK++ + ++++ + ++ + + ++ ++ + + ++ Sbjct: 104 SLVHQKLSEDDIKRFGVKEMTLSRMVDDMVLEKFAKELNLRVSNKSIRDLIGDMPMFQDK 163 Query: 116 SAEDFS--------------------------------SFLDKQGIGDNHFKQYLAIQSI 143 S + + G + + A + Sbjct: 164 SGKLDEQRFKDLLADAGMTEASYIGKVRDSLPAFVLSECIFPRSGEVYSQYYDGFAQDVL 223 Query: 144 WPDVVKNDFM------------LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + + ++E N+ + + ++ Sbjct: 224 RGIMQSRTVDIVEISQSAVENTSTPTDSDLEAMYNEGTKNGELIMPEYRSAEYMIVSEDD 283 Query: 192 -------LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG--------KAQY 236 ++ + + + + R L + ++ + G Sbjct: 284 ALDEVTASNDEVESEIKNSELHDQRDVLNLVFPSESEASAAYKAIKEGKAFEAVVKDLGT 343 Query: 237 ---------LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI--AL 284 + + L + +N + ++ + + + G + I K + + L Sbjct: 344 TVEEVTLRNVTKELLPIEVRNTVFDLNEGEVSGVFRSVVGWHVMKILSKHPISAKDLKKL 403 Query: 285 KAYLSAQNTPTKIEKHEAEYVKK 307 K ++ K + + ++K Sbjct: 404 KEKVAMSIKRQKARELFSASIRK 426 >gi|45658827|ref|YP_002913.1| hypothetical protein LIC13000 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602072|gb|AAS71550.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 293 Score = 43.5 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 30/310 (9%), Positives = 75/310 (24%), Gaps = 51/310 (16%) Query: 3 SKVFTSLSDFI--KLLTTY--FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK 58 SK+F + I K + ++ ++ + + S +NG I + + Sbjct: 10 SKMFFGKNIVIGPKYFLGAGALFGFLLALIGLLFPEREILLSDTVAEVNGNYIKKDEYFR 69 Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 + L N E+ N Sbjct: 70 TLTALSSDSKNPITEEA----------------------------------RANVLERLI 95 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + + + + L SI V+++ + + N Sbjct: 96 EEELLVQRGLELGFAREDRLIRASIVRAVIQSIISENVSEKPNVLELRSYFLLNRDKFLK 155 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 R + + + + K +++A + K+ D Sbjct: 156 TSRYQVMVYQQSDEVSATRISKELREAGRTMAPNVYYIPNTLLPLRKLLDYLG------- 208 Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIA--ICDKRDLGGEIALKAYLSAQNTPTK 296 L ++P + + + + + ++K + A K Sbjct: 209 ----PDVVLALGNLKSGEVSDPIKSGEKFFVVKVFVLEPGSTPDFDSVKKEVEASYIQEK 264 Query: 297 IEKHEAEYVK 306 ++ EY+ Sbjct: 265 GDRTLREYLD 274 >gi|116624599|ref|YP_826755.1| DSBA oxidoreductase [Candidatus Solibacter usitatus Ellin6076] gi|116227761|gb|ABJ86470.1| DSBA oxidoreductase [Candidatus Solibacter usitatus Ellin6076] Length = 340 Score = 43.5 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 22/49 (44%) Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 + + G +L+ + T +++ + E++K LR+ A + + Sbjct: 109 FFKENSTKLKGDFKSLEEQIRNFLTAQRLQARQQEFLKSLRTAAKVEVF 157 Score = 42.7 bits (98), Expect = 0.078, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 37/117 (31%), Gaps = 2/117 (1%) Query: 43 RTTINGEVITDGDISKRI--ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 +NG I +I ++ L +LQ+ L K + +I + L + E + G+ Sbjct: 30 AAMVNGAPILASEIDAKLGNDLAQLQQQIFNLRKKQLNTVIDQKLLEDESARRGVMIAEL 89 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + T AE F + GD + + ++ Sbjct: 90 VQSEVTSHVTPATSAEAEKFFKENSTKLKGDFKSLEEQIRNFLTAQRLQARQQEFLK 146 >gi|257418300|ref|ZP_05595294.1| ppiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis T11] gi|257160128|gb|EEU90088.1| ppiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis T11] Length = 342 Score = 43.5 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 25/313 (7%), Positives = 79/313 (25%), Gaps = 41/313 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + + S + + S+ T+ G IT D +I + Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A ++++ + +++ + + + E + Sbjct: 54 AFSQMVIYKVFEEKYGD-------KVTDKAIQKKFDDAKKQVEAQGGKFSDALTQAGLTE 106 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + ++ + ++ + + Q Sbjct: 107 KSFKKQLKQAEAMQVGLKDHLKITDEDLKTAWASFHPEVEAQII---------------Q 151 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF--QNLLKK 252 + K ++ + ++ GK ++ +S P + K Sbjct: 152 VASEDDAKAVKKEITDGGDFAKIAKDKSTDATTKKDGGKIKFDSQSTTVPAEVKEAAFKL 211 Query: 253 SQNNTTNPYVTQKG------VEYIAICDKRDLGGE-IALKAYLSAQNTPTKI--EKHEAE 303 + P + + + G + + + TK+ + +A+ Sbjct: 212 KDGEVSEPIAATNAQTYQTTYYVVKMTKNKAKGNDMKPYEKEIKKIAEDTKLADQTFQAK 271 Query: 304 YVKKLRSNAIIHY 316 + A + Sbjct: 272 VISDELKAANVKI 284 >gi|125975115|ref|YP_001039025.1| hypothetical protein Cthe_2633 [Clostridium thermocellum ATCC 27405] gi|256003230|ref|ZP_05428222.1| hypothetical protein ClothDRAFT_0189 [Clostridium thermocellum DSM 2360] gi|281418466|ref|ZP_06249485.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum JW20] gi|125715340|gb|ABN53832.1| hypothetical protein Cthe_2633 [Clostridium thermocellum ATCC 27405] gi|255992921|gb|EEU03011.1| hypothetical protein ClothDRAFT_0189 [Clostridium thermocellum DSM 2360] gi|281407550|gb|EFB37809.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum JW20] gi|316939281|gb|ADU73315.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium thermocellum DSM 1313] Length = 364 Score = 43.5 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 88/312 (28%), Gaps = 51/312 (16%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE------------------------LEKIAVQ 78 T+ GE IT + + +K+Q N ++ A+ Sbjct: 40 VGTVAGEKITTKEFKYFLGYVKIQMENDAQLQDQASKEAFWDSKIEGVDAKELAKQKALD 99 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNY-------------FFVQHARNTGLSAEDFSSFLD 125 ++ + + G+ + + F Q A+NTG+ L Sbjct: 100 SCKEFKIQLLKARERGLFLNDKDMQEIENSITTLLNQMAQFDQAAKNTGVEVMSAEEMLK 159 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + + + D E E+ + K++ + + + + Sbjct: 160 DTYGVTIQEYKEILKDLRLVLKLVEDEQKNITITEEELRNRYNENKDVFDKITVRHIIFY 219 Query: 186 SIPDNKLQN-QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQ------- 235 +I + +K+ + + L +E A ++ + S G Sbjct: 220 TINPKTDVSLSEDAKKKAYENAKKALERANKGEDMEALALELSEDSGVEGNKGILEINSL 279 Query: 236 YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 + E L + + + T+ T G + I + + + + Sbjct: 280 KVNEPKLSNLVKWAYEHKVGD-TDIVETGYGYHVVKIEKRTE---YKDVVQNVKNVILSE 335 Query: 296 KIEKHEAEYVKK 307 + + ++ ++ Sbjct: 336 RYNQILGQWKQE 347 >gi|114569954|ref|YP_756634.1| hypothetical protein Mmar10_1404 [Maricaulis maris MCS10] gi|114340416|gb|ABI65696.1| hypothetical protein Mmar10_1404 [Maricaulis maris MCS10] Length = 645 Score = 43.5 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 5/114 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----I 56 M S I L+ +++ F I + + S + E I+ + Sbjct: 1 MLSNFRAFAQSPIALIIIVLLVLSFAIAMPGAGGIFTGSGDAVVVVGPERISQREMATAF 60 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 ++ +A L+ Q ++A +E I + +Q+I + + + + A Sbjct: 61 NREVARLQEQN-PDVTREMAREEGIAYQVLQQQITMATMAARARDLGLAISDVA 113 >gi|300811432|ref|ZP_07091927.1| putative foldase protein PrsA [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497590|gb|EFK32617.1| putative foldase protein PrsA [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 307 Score = 43.5 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 29/307 (9%), Positives = 72/307 (23%), Gaps = 33/307 (10%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN--GEVITDGDISKRIALLKLQKINGEL 72 + + + + + A SS T +N G IT + + + Sbjct: 1 MKKHLKKIAVLAGAAAIGLSTAACSSSSATVVNYKGGKITQDEYYEAMKDTSA------- 53 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + LI+ K + + N + + + + +S Sbjct: 54 GQSTLVSLIIYRTLKAQYGDKVSSKKINAEYNKYKKQYGSNFSTVLSYSGLT-------- 105 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + + T + Sbjct: 106 --TKSFKQNLATNLYSVAALKDLKKPTTTQEKNWWKSYHTKTT------VQHIVVDKKST 157 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 + + + + + +K A K+ + + K Sbjct: 158 AETVIKKLKSGTSFATLAKKYSTDTATKKKAGKMAAFDSTD-----TNLSSTFKSAVWKL 212 Query: 253 SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT--KIEKHEAEYVKKLR 309 + T P T G E I + + G K+++ Q + + K+ Sbjct: 213 KEGEYTTTPVKTSSGYEVIKVLKTTEKGSYTKNKSFIDKQLYAKWAADSNTMTKIISKVL 272 Query: 310 SNAIIHY 316 A ++ Sbjct: 273 KKANVNI 279 >gi|218440442|ref|YP_002378771.1| hypothetical protein PCC7424_3511 [Cyanothece sp. PCC 7424] gi|218173170|gb|ACK71903.1| conserved hypothetical protein [Cyanothece sp. PCC 7424] Length = 257 Score = 43.5 bits (100), Expect = 0.041, Method: Composition-based stats. Identities = 20/237 (8%), Positives = 65/237 (27%), Gaps = 16/237 (6%) Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 + NG+L++I + L + + + E+ D + A D ++L Sbjct: 20 LQKNGQLKEICQKVLHQKIINRVAQERHLTVTDEEIQAEADCFRRQMRLEKAADTLAWLA 79 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + + ++ + + + + ++ F + E N +++ + Sbjct: 80 DELMTPEDWETGIRERLLTQKLAESLFGKEVEKSFAENKLNFEQIILYQIIVPYETLAWE 139 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 + + F Q + + +++L ++ Sbjct: 140 IFYQIEEEEISFYQAAHLY-------------NFDAKSRYYCGFEGQVYRWILNPEISSV 186 Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 P T++G I + ++ + + + + Sbjct: 187 L---FSSKVGEVIPPLKTEQGYHLFLIEEFISPELTPEIRQEILNKMFNEWLTRELN 240 >gi|1314566|gb|AAC44059.1| unknown [Sphingomonas sp. S88] Length = 300 Score = 43.5 bits (100), Expect = 0.041, Method: Composition-based stats. Identities = 29/295 (9%), Positives = 81/295 (27%), Gaps = 50/295 (16%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLK 86 S + ++ +++G+ IT +++ + ++ + E++A+Q +I + Sbjct: 19 GCGSKEGKLDKGQVVASVDGDEITIFELNAEVQATQVPQGTDRKLAEQMALQRIIERKIL 78 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 + + + + A + I Sbjct: 79 AKYAREQKLDKTPVFLIQQ-------------------------------RRADELILTT 107 Query: 147 VVKNDFMLKY-GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 ++++ + EI + + + + P + +K Sbjct: 108 LLRDKIAGGIAQPTDAEIAQYEAAHPDRFAQRKIYSIEQIVFPPPGSAAKFKEFAPLKTL 167 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265 ++ +L D + + ++ L + L P+ + TQ+ Sbjct: 168 DQLAAKLTADGVQFRRAPTQ-----------LDTAALPPEIAAKIAALPAQELFILPTQQ 216 Query: 266 GV--EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI--IHY 316 GV I + L G+ + + K + A + Y Sbjct: 217 GVTANVITGTTIQPLAGDQ-ARELALNTLRTERFSKAADAQLNDRLKKARESVKY 270 >gi|126659217|ref|ZP_01730355.1| hypothetical protein CY0110_04558 [Cyanothece sp. CCY0110] gi|126619522|gb|EAZ90253.1| hypothetical protein CY0110_04558 [Cyanothece sp. CCY0110] Length = 260 Score = 43.5 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 23/255 (9%), Positives = 59/255 (23%), Gaps = 31/255 (12%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 I I + I+ DI +A +L + +L E + Q I T + Sbjct: 5 NIVLKIGDQAISSEDIYPLLAQYRL-----------LPQLAKEIIIDQAIADITCTPEET 53 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 T+ + + + L +L+ Sbjct: 54 TLAKQQFYQKQQISDENQLKVWLNHHGMTP------------------EQLETLSVRDLK 95 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +E + + + L + + ++ + + Sbjct: 96 IEKFKHLTWGDKLDPYFVKCKGQLDRVVYSLIRTKDPGVAQELYFRIQEGE-NTFSELAR 154 Query: 221 KFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 +++ + G + + Q L + P + + + Sbjct: 155 QYSQGSEAQTGGLLGPVELNTPHPKIAQILAASRPGQLSPPTQVGEWWIIVRLEKYMSAQ 214 Query: 280 GEIALKAYLSAQNTP 294 + K L + Sbjct: 215 LDDNTKQRLLNELFQ 229 >gi|308389331|gb|ADO31651.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis alpha710] gi|325136276|gb|EGC58884.1| hypothetical protein NMBM0579_1013 [Neisseria meningitidis M0579] gi|325208178|gb|ADZ03630.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33] Length = 512 Score = 43.5 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 33/309 (10%), Positives = 82/309 (26%), Gaps = 22/309 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 +F S+ + LI V + + E I+D I+ I + Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQNEQ 60 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 G Q L+ KQ + GI+ S + V + + + L Sbjct: 61 A-DGGGPSRDAVFQSLLQRAYLKQGAKLLGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 ++ + + + ++N + + + + + Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLV--NLVQNGVLVGDAQAEQLIRLTQVNRTIRSH 177 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 PD + + ++ + + ++ ++ Q + E+++ Sbjct: 178 TFNPDEFIAQVKVSEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKN 237 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 F+ + + N KA + + K + Sbjct: 238 AFEERVARLPANEAKL-------------------SFEQEKAAVENELKMKKAVADFNKA 278 Query: 305 VKKLRSNAI 313 +KL +A Sbjct: 279 KEKLSDDAF 287 >gi|162451693|ref|YP_001614060.1| foldase protein prsA 4 precursor [Sorangium cellulosum 'So ce 56'] gi|161162275|emb|CAN93580.1| Foldase protein prsA 4 precursor (EC 5.2.1.8) [Sorangium cellulosum 'So ce 56'] Length = 172 Score = 43.5 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 25/81 (30%), Gaps = 2/81 (2%) Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESD-LHPQFQNL 249 + + R +A + + +++ + S G + +D L P Sbjct: 88 TRTREEACLRAMEARDKIRGGADFGEAVAQYSEEAGAASRGGSLGTVERADVLPPFADAA 147 Query: 250 LKKSQNNTTNPYVTQKGVEYI 270 + ++ T+ G I Sbjct: 148 FELELQQLSDVVETRYGFHVI 168 >gi|94969502|ref|YP_591550.1| hypothetical protein Acid345_2475 [Candidatus Koribacter versatilis Ellin345] gi|94551552|gb|ABF41476.1| hypothetical protein Acid345_2475 [Candidatus Koribacter versatilis Ellin345] Length = 234 Score = 43.5 bits (100), Expect = 0.043, Method: Composition-based stats. Identities = 23/196 (11%), Positives = 59/196 (30%), Gaps = 9/196 (4%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI------NGELEKIAVQELIVET 84 S ++ + R+ +++ I D + +A LQ+ + +Q L+ + Sbjct: 19 PSSRAGEVIDRLVASVDSTPILQSDWDEAVAFEALQQGRLISSFTENDRREVLQHLVDQR 78 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLS---AEDFSSFLDKQGIGDNHFKQYLAIQ 141 L + +I S I + R E + S L G+ ++ Q Sbjct: 79 LIQAQIGDSQIAAAEEREITKSLDDLRKLYPQATTDEAWRSLLQTYGLDQETVRRKTTAQ 138 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + + ++ + + V++ + ++ K++ Q+ Sbjct: 139 LEALRFINLRLRPESRIARADVESYYKNNYVPEVQKRGEKPEELTVVSPKIEEILRQQRM 198 Query: 202 IKDAEESRLRLPKDCN 217 L + Sbjct: 199 ATLLTNWLQELHNHAD 214 >gi|472835|gb|AAA17676.1| ORF1 [Lactococcus lactis subsp. cremoris] Length = 295 Score = 43.5 bits (100), Expect = 0.043, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 87/286 (30%), Gaps = 36/286 (12%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K+ + + ++S + + T +G +T+ + K + Sbjct: 4 KMRLKVLLASTATALLLLSGCQSNQTDQTVATYSGGKVTESSLYKELK-------QSPTT 56 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 K + +++ K + + TV + + + G E+F +FL + G + Sbjct: 57 KTMLANMLIYRALNHAYGK---SVSTKTVYDAYDSYKQQYG---ENFDAFLSQNGFSRSS 110 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 FK+ L + +K K +++ + ++ +L S D Q Sbjct: 111 FKESLRTNFLSEVALKKL--KKVSESQLKAAWKTY------QPKVTVQHILTSDEDTAKQ 162 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQY-LLESDLHPQFQNLLK 251 + + + + GK + L L F++ Sbjct: 163 VISDLAA-----------GKDFAMLAKTDSIDTATKDNGGKISFELNNKTLDATFKDAAY 211 Query: 252 K-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 K + T P G E I + + G + K L+A Sbjct: 212 KLKNGDYTQTPVKVTDGYEVIKMINHPAKGTFTSSKKALTASVYAK 257 >gi|256372364|ref|YP_003110188.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidimicrobium ferrooxidans DSM 10331] gi|256008948|gb|ACU54515.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidimicrobium ferrooxidans DSM 10331] Length = 337 Score = 43.5 bits (100), Expect = 0.043, Method: Composition-based stats. Identities = 33/309 (10%), Positives = 69/309 (22%), Gaps = 28/309 (9%) Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78 +F LI +++ A + T+ +T + +A + K V Sbjct: 5 WFGLIPLAGAVVLASCGSAS---VAATVGNRTLTTSQLEAELADVAAN-------KAFVS 54 Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 EL+ T + Sbjct: 55 ELVASHEPVWGPHDQSYTALFVDNILSRRITIMRVQAALGRMHVQPSAVATSLGTALAEQ 114 Query: 139 AI------QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + + +E+E + V+ Y Sbjct: 115 SAGGQTVFSGFPRSYQQRLIRDSVDIVELEAALGHVSLTTSGVQAYYRAH---PADFESY 171 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKL--EKFASKIHDVSIGKAQYLLESDLHPQF---- 246 + +AE +L K + K +S + G E F Sbjct: 172 CGSEILVGTPTEAEAVVAKLHKGQSFAAVAKSSSTQNAAGGGALGCGTEGQYASSFGSGV 231 Query: 247 -QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305 ++ + G I + ++ A L+A + + +Y+ Sbjct: 232 ATSVTSLPVGTPSGVVQVPNGFAVFEITSRSEIPFSQA--ELLAADTMVSHGQTLLNDYL 289 Query: 306 KKLRSNAII 314 + A I Sbjct: 290 ARTVHTANI 298 >gi|325181724|emb|CCA16179.1| peptidylprolyl cistrans isomerase NIMAinteracting 1 putative [Albugo laibachii Nc14] Length = 187 Score = 43.5 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 5/57 (8%), Positives = 14/57 (24%), Gaps = 1/57 (1%) Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 ++ + G + F+ N ++ + G+ I Sbjct: 127 FEEIAKEESDCSSAKRGGDLGMFTRGQMQASFEAAAFALEVNQLSDIVESDSGIHLI 183 >gi|116495723|ref|YP_807457.1| peptidylprolyl isomerase [Lactobacillus casei ATCC 334] gi|116105873|gb|ABJ71015.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus casei ATCC 334] Length = 299 Score = 43.5 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 88/286 (30%), Gaps = 36/286 (12%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K+ + + ++S + + T +G +T+ + K + Sbjct: 4 KMRLKVLLASTATALLLLSGCQSNQADQTVATYSGGKVTESNFYKELK-------QSPTT 56 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 K + +++ K + + TVN + + + G E+F +FL + G + Sbjct: 57 KTMLANMLIYRALNHAYGK---SVSTKTVNDAYDSYKQQYG---ENFDAFLSQNGFSRSS 110 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 FK+ L + +K K +++ + ++ +L S D Q Sbjct: 111 FKESLRTNFLSEVALKKL--KKVSESQLKAAWKTY------QPKVTVQHILTSDEDTAKQ 162 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLES-DLHPQFQNLLK 251 + + + + GK + + L F++ Sbjct: 163 VISDLAA-----------GQDFATLAKTDSIDTATKDNGGKISFESNNKTLDATFKDAAY 211 Query: 252 K-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 K + T P G E I + + G + K L+A Sbjct: 212 KLKNGDYTQTPVKVTDGYEVIKMINHPAKGTFTSSKKALTASVYAK 257 >gi|92117281|ref|YP_577010.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter hamburgensis X14] gi|91800175|gb|ABE62550.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter hamburgensis X14] Length = 635 Score = 43.5 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 28/395 (7%), Positives = 90/395 (22%), Gaps = 87/395 (22%) Query: 1 MTSKVFTSLSDFIKLLTT----YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI 56 M + + S+++ + +++ F I I S T+ I+ Sbjct: 1 MLRGIRNASSNWLGKILMSIVMGLLIVAFGIWGIADIFHGFGQSN-LATVGSTEISTEQF 59 Query: 57 SKRIALLKLQKING-------------ELEKIAVQELI------------------VETL 85 + Q L++ +Q++I E Sbjct: 60 RQIYNDRLQQLARQFGRSLSPDQVRALGLDRQVLQQVIAEAALDEDARRKGLNASDDEIR 119 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH--------FKQY 137 ++ + + + F R G + + + + + Sbjct: 120 RQIMSDPNFKGANDAFDPARFAGLIRQMGYTEQRYVTEQRHTTLRREIAGTVAAGVEPSK 179 Query: 138 LAIQSIWPDVVKNDFMLKYG-----------NLEMEIPANKQKMKNITVREYLIRTVLFS 186 ++ + + + ++ + K + Sbjct: 180 TLLEMLNHFQNEQRTIDYVKLGVPQAGTIDPPTPEQLASYFDAHKVQFRAPEFRKIAFVV 239 Query: 187 IPDNKLQ-----NQGFVQKRIKDAEESRLRLPKD------CNKLEKFASKIHDVSIG--- 232 + + + +K + ++ K + + + ++ G Sbjct: 240 MTPEGIAKTTAVSDEDAKKAYEQQKDKLSTPEKRQLWQIVFPNVTEAQAARSKIAGGASF 299 Query: 233 --------------KAQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 + +S++ + + + P + GV + + Sbjct: 300 DDIAKERNLAASDVDLGIISKSEIIDPAVAEAAFSLKADEVSQPIQGRFGVALVKVGKIE 359 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 G ++A+ V L + Sbjct: 360 P--GNQPTYDSVAAKLKHDIAVDRARAEVNDLHNK 392 >gi|16331633|ref|NP_442361.1| hypothetical protein slr0208 [Synechocystis sp. PCC 6803] gi|1001694|dbj|BAA10431.1| slr0208 [Synechocystis sp. PCC 6803] Length = 259 Score = 43.5 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 15/267 (5%), Positives = 56/267 (20%), Gaps = 31/267 (11%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 + T+ + + ++ + +L +I + + I E ++ Sbjct: 2 SVVLTVGDRQVREDELYPLMVEYQLL--PHLAREILLDQAIAHIQLTPEEQQ-------- 51 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 +N L + ++Q Q + Sbjct: 52 ----------QNLALFYQQTQITNEEQRQAWLKQSGMTLEQLETSILRTARLEKFKHQTW 101 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + + + + + + + Sbjct: 102 DDQLEGHFLNSKDKLDQVIYSLIRSRDSGIVQE----------LYFRIQEGEGDFSALAR 151 Query: 221 KFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 +++ + G + + Q L P + + + Sbjct: 152 QYSEGPEAQNGGLIGPVELNVPHPQIVQLLKSTPAGKLCLPIAVGEWWILLRLEKYISSQ 211 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVK 306 + ++ L T + + ++ Sbjct: 212 LDDNIRQRLRNDLFQTWLSQQIQTKIQ 238 >gi|119357640|ref|YP_912284.1| hypothetical protein Cpha266_1844 [Chlorobium phaeobacteroides DSM 266] gi|119354989|gb|ABL65860.1| conserved hypothetical protein [Chlorobium phaeobacteroides DSM 266] Length = 237 Score = 43.5 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 35/121 (28%), Gaps = 4/121 (3%) Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 + ++ ++ E + +F+ S G+ + L+P Sbjct: 119 VFFMLRNKDHELTRELFFRLESGEDSFE---SLASRFSEGRESTSGGRVGPVEMKQLNPA 175 Query: 246 FQNLLKKSQNNTTNPYVTQKGV-EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 L ++ NP + G I + +K + LK L ++ + Sbjct: 176 LARFLSTAKAGVVNPPIVLDGFGVIILLQEKIPAKLDEGLKPTLVNHLFQEWVQAEIKAF 235 Query: 305 V 305 Sbjct: 236 F 236 >gi|257066458|ref|YP_003152714.1| hypothetical protein Apre_0965 [Anaerococcus prevotii DSM 20548] gi|256798338|gb|ACV28993.1| hypothetical protein Apre_0965 [Anaerococcus prevotii DSM 20548] Length = 308 Score = 43.5 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 31/317 (9%), Positives = 83/317 (26%), Gaps = 10/317 (3%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + K+L T F+L +S I +++G+ I+ D+ + Sbjct: 1 MKQTIKNLKTKTSKILLTAFLLFATLT---SCNSKDRTTSNIIASVDGKTIS-SDLYSKE 56 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + + ++ +I + + N ++ Sbjct: 57 LRFYQAYYSKVYGESYLENKSKNGKTNDQILRDELVDSMIKDQVMKKDLESNNIKLDDNG 116 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 S+ L + + L + +N N + +K V++ + Sbjct: 117 SNSLKNNLSDKLNGEDSLKANILALGFNENSINDILYNDSIRKAHFDLYLKKNKVQDKDV 176 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 + + V + ++ K K + + Sbjct: 177 VDFYNKDKNLHRLYKYNVLVFDDENVAKNIKDKITDAKSFKSFLNKNARNYSIINSDFVY 236 Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 K ++ +N + + + I + L + I+ Sbjct: 237 INDQLLLESKVKEKDEISNIFEHKGKYCILMIN------SYNENENDLLLKAKDIYIKNS 290 Query: 301 EAEYVKKLRSNAIIHYY 317 +Y+ +L + I + Sbjct: 291 YYDYLNRLIKESKIKVF 307 >gi|219122864|ref|XP_002181757.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407033|gb|EEC46971.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 115 Score = 43.1 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 5/80 (6%), Positives = 16/80 (20%), Gaps = 1/80 (1%) Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252 + + + + + + G + + F+ Sbjct: 33 EQARQELESYQHRIIAEGLDEAFPKYATSRSDCGSFSNQGDLGFFGPGQMQRPFEEAAFA 92 Query: 253 -SQNNTTNPYVTQKGVEYIA 271 + + GV I Sbjct: 93 LQPGEMSGIVSSDSGVHLIY 112 >gi|122064921|sp|P0C2B5|PRSA_LACLC RecName: Full=Foldase protein prsA; AltName: Full=Protease maturation protein prtM; Flags: Precursor gi|432402|gb|AAA03532.1| maturation protein [Lactococcus lactis] gi|623055|gb|AAA60395.1| proteinase activation protein [Lactococcus lactis] Length = 299 Score = 43.1 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 88/286 (30%), Gaps = 36/286 (12%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K+ + + ++S + + T +G +T+ + K + Sbjct: 4 KMRLKVLLASTATALLLLSGCQSNQTDQTVATYSGGKVTESSLYKELK-------QSPTT 56 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 K + +++ K + + TVN + + + G E+F +FL + G + Sbjct: 57 KTMLANMLIYRALNHAYGK---SVSTKTVNDAYDSYKQQYG---ENFDAFLSQNGFSRSS 110 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 FK+ L + +K K +++ + ++ +L S D Q Sbjct: 111 FKESLRTNFLSEVALKKL--KKVSESQLKAAWKTY------QPKVTVQHILTSDEDTAKQ 162 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQY-LLESDLHPQFQNLLK 251 + + + + GK + L L F++ Sbjct: 163 VISDLAA-----------GKDFAMLAKTDSIDTATKDNGGKISFELNNKTLDATFKDAAY 211 Query: 252 K-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 K + T P G E I + + G + K L+A Sbjct: 212 KLKNGDYTQTPVKVTDGYEVIKMINHPAKGTFTSSKKALTASVYAK 257 >gi|313681990|ref|YP_004059728.1| hypothetical protein Sulku_0862 [Sulfuricurvum kujiense DSM 16994] gi|313154850|gb|ADR33528.1| hypothetical protein Sulku_0862 [Sulfuricurvum kujiense DSM 16994] Length = 488 Score = 43.1 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 51/164 (31%), Gaps = 19/164 (11%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI- 60 + L I + T F+ F +Y A + + IT ++ K Sbjct: 5 MQRHRKYLVITIWISTIAFIGAGFVGWGQYNYGDKAGA---VAKVGDISITSAELQKSYS 61 Query: 61 ------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + Q L++ A+++L+ + L G+T + Sbjct: 62 NLFNQYNQLFQGKFDEKQAQQFGLQRQALRQLVNQALVLNLANSYGLTVTDQELWDVIKS 121 Query: 109 HARNTGLSAEDFSSFLD---KQGIGDNHFKQYLAIQSIWPDVVK 149 + + D S++ + + + +++ + + + + Sbjct: 122 QSAFSKDGTFDKSTYAEVLKQNRLTIKEYEESMKKELLIQKTLY 165 >gi|158336319|ref|YP_001517493.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Acaryochloris marina MBIC11017] gi|158306560|gb|ABW28177.1| PpiC-type peptidyl-prolyl cis-trans isomerase domain containing protein [Acaryochloris marina MBIC11017] Length = 250 Score = 43.1 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 24/244 (9%), Positives = 65/244 (26%), Gaps = 37/244 (15%) Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 + Q + L+++ + ++I + E + + Y + AR + Sbjct: 23 QYQLLPQLLKELIIDQVIQDVQLSSE--EVVQAVEQFYRQYQIGEEARREAWLTHYRMTP 80 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 K Y W + V++DF+ + G + + + + +E R Sbjct: 81 QQLAAQAQRQMKLYKFKLQTWNNQVESDFLQQKGQFDQYVYSLIRVASAEVAQELYFR-- 138 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL- 242 + + K++ + G + ++L Sbjct: 139 ------------------------LQAGEQAFADLATKYSQGPEAQTGGLIGPVTAANLH 174 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 Q L P + +++ + +E+ Sbjct: 175 PTLVQILTSAQPGQVRPPIRLGEWFVIVSLQKLISAQLDAP--------LRQQLLEQRFN 226 Query: 303 EYVK 306 E+++ Sbjct: 227 EWLQ 230 >gi|87301645|ref|ZP_01084485.1| hypothetical protein WH5701_03184 [Synechococcus sp. WH 5701] gi|87283862|gb|EAQ75816.1| hypothetical protein WH5701_03184 [Synechococcus sp. WH 5701] Length = 249 Score = 43.1 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 10/155 (6%), Positives = 39/155 (25%), Gaps = 1/155 (0%) Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + ++ ++ +L R L + + Sbjct: 85 QIQQPLKLRHHCQEHFRHKAETHFLSRKNHLDRVVYSLLRVQDPFLARELYLRIAGQEAS 144 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273 + F++ + + G + + + L P++ + + + Sbjct: 145 FADLAAAFSTGVEKHTKGLVGPVPLTQAHPALAERLRVSRPGLLQEPFLLEGFWLILRLE 204 Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 E A ++ + +++ + + L Sbjct: 205 SYHPASFEEATADQMALELFEQWVKEETSRKLAAL 239 >gi|238855146|ref|ZP_04645468.1| foldase protein PrsA [Lactobacillus jensenii 269-3] gi|282932559|ref|ZP_06337981.1| foldase protein PrsA [Lactobacillus jensenii 208-1] gi|313473154|ref|ZP_07813638.1| foldase protein PrsA [Lactobacillus jensenii 1153] gi|238832227|gb|EEQ24542.1| foldase protein PrsA [Lactobacillus jensenii 269-3] gi|239528600|gb|EEQ67601.1| foldase protein PrsA [Lactobacillus jensenii 1153] gi|281303307|gb|EFA95487.1| foldase protein PrsA [Lactobacillus jensenii 208-1] Length = 304 Score = 43.1 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 34/274 (12%), Positives = 74/274 (27%), Gaps = 39/274 (14%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 G IT + K + + + K + +I+ KQ+ K + + Sbjct: 35 GGKITQDEYYKELK-------SSQAGKSTLANMIIYRALKQQYGKKVTQKQVDKEYNAYK 87 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + ++ SA + + + + + + K Sbjct: 88 KQYGSSFESALEQNGYTTSSFKKNIETNLLTVAALKDIKKITSKQEQKAWKS-------- 139 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKI 226 + ++ +L + +D + +K++ Sbjct: 140 ------YQPKVTVQHIL-----------VSKKSTAEDVIKQLKSGTSFATLAKKYSIDSA 182 Query: 227 HDVSIGKAQYLLESD--LHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEI 282 GK +D L F+ K +N TT P TQ G E I + G Sbjct: 183 TKNKGGKLTAFDSTDTTLDSDFKTAAFKLKNGEYTTTPVKTQSGYEIIKMIKHPSKGKFS 242 Query: 283 ALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314 K + Q + + ++ + + I Sbjct: 243 DHKKEIDEQIYQSMEQDTTTMQSVIRTVLKKSDI 276 >gi|325295071|ref|YP_004281585.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065519|gb|ADY73526.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 182 Score = 43.1 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 4/88 (4%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ----KINGELEKIAV 77 L+ + V+ + S +I +NG+ IT+ + + + L + K N + + + Sbjct: 4 LLFSLSMVAVTSLTAQGSDKILAKVNGKPITESQLEEVLKGLPAKYNSVKNNPQFQSQVL 63 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYF 105 LI + L QE +K GI ++ Sbjct: 64 NSLINQELLYQEAKKEGIEKNAKVQRQI 91 >gi|198276170|ref|ZP_03208701.1| hypothetical protein BACPLE_02359 [Bacteroides plebeius DSM 17135] gi|198270982|gb|EDY95252.1| hypothetical protein BACPLE_02359 [Bacteroides plebeius DSM 17135] Length = 423 Score = 43.1 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 24/182 (13%), Positives = 62/182 (34%), Gaps = 5/182 (2%) Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 +++ Q + +S E F + K+ + + + Sbjct: 25 SVEEFEHYYTQVYAVSRVSVEQFLPHFLYYKLKVADAKRQSWDTITDFRLQCSALQNEIL 84 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E + ++ + R + F +P + Q V ++ D+ + L+ Sbjct: 85 KSE---KRGVPQKQDTLLNWVRFRQISFLLPQHASSEQERVARQRIDSVYTALKNGIPFE 141 Query: 218 KLEK-FASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 KL + + + +++ E L +F + L + N + P+ + G+ + + D+ Sbjct: 142 KLAQPYIKNLLPSPYLDGEWIPERCLIKEFTEQLSTLKKGNYSAPFFSPLGIHIVYLLDR 201 Query: 276 RD 277 R Sbjct: 202 RQ 203 >gi|332712099|ref|ZP_08432027.1| hypothetical protein LYNGBM3L_71240 [Lyngbya majuscula 3L] gi|332348905|gb|EGJ28517.1| hypothetical protein LYNGBM3L_71240 [Lyngbya majuscula 3L] Length = 252 Score = 43.1 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 20/238 (8%), Positives = 53/238 (22%), Gaps = 4/238 (1%) Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 + + L E K +K N + A+ Sbjct: 4 LSKASVTPEEIMYSLKKEMHLKGICQKVLYQRVINKAAQERGITVTPEDVQAQADEIRYA 63 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + +LA Q + + + + ++ + ++ + L + Sbjct: 64 NRLEKAAETLAWLADQMVTAEDWEAGISDRLLAQKLAESLFYKDVEKSFAQNRLDFEQVL 123 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 Q+ EE + + + + + G L P+ Sbjct: 124 VYQILVDSE-EIAQELFYQIEEGEISFYEAAHFYDIDPERQRRC--GYEGKLPRWSFKPE 180 Query: 246 FQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 + T+P T++G + + + + Sbjct: 181 IAALIFSVQPGEVTHPLQTEQGYHLFLVEEFIPAELTEEKSKEILQSMFQEWLNSEVN 238 >gi|229552580|ref|ZP_04441305.1| peptidylprolyl isomerase [Lactobacillus rhamnosus LMS2-1] gi|258508775|ref|YP_003171526.1| peptidylprolyl cis-trans isomerase PrsA1 [Lactobacillus rhamnosus GG] gi|258539953|ref|YP_003174452.1| peptidylprolyl cis-trans isomerase PrsA1 [Lactobacillus rhamnosus Lc 705] gi|229314132|gb|EEN80105.1| peptidylprolyl isomerase [Lactobacillus rhamnosus LMS2-1] gi|257148702|emb|CAR87675.1| Peptidylprolyl cis-trans isomerase PrsA1 [Lactobacillus rhamnosus GG] gi|257151629|emb|CAR90601.1| Peptidylprolyl cis-trans isomerase PrsA1 [Lactobacillus rhamnosus Lc 705] gi|259650081|dbj|BAI42243.1| peptidylprolyl isomerase [Lactobacillus rhamnosus GG] Length = 300 Score = 43.1 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 34/299 (11%), Positives = 76/299 (25%), Gaps = 35/299 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 I+ + V+ SS + G +T + + + ++ +IV Sbjct: 5 ILGVVGLFVAVTLAGCSSSTVANMKGAKVTKDEYYDAMK-------KTTTGQATLRNMIV 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 +Q+ N + + S D + + + Q Sbjct: 58 LKALEQQYPNKVSDKKVN----------SQFNKLKKQYGSSFDSTLEQNGYTESSFKDQI 107 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + +I + +K + + ++ + ++ I Sbjct: 108 RTTLYSEVALKDMKKPTTKQIESQWKKYQPKIQ-----------VQHILVKTEDEAKQII 156 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL--LESDLHPQFQNLLKK--SQNNTT 258 D ++ + + GK ++ L F++ K + T Sbjct: 157 SDYQKDPTEKNFESLAKKNSIDTGTKNKGGKLAAFDNTDTSLDSTFKSAAFKLKKAGDIT 216 Query: 259 N-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP--TKIEKHEAEYVKKLRSNAII 314 P TQ G I + G K L Q + K+ A + Sbjct: 217 TTPVKTQYGYHVIRVISIAKKGTMKEHKKDLEKQIYTSWQSDSTVMNGIITKVLKKANV 275 >gi|218960353|ref|YP_001740128.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167729010|emb|CAO79921.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 266 Score = 43.1 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 20/258 (7%), Positives = 77/258 (29%), Gaps = 14/258 (5%) Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 K ++ L ++ + L ++ K + + ++ Sbjct: 19 KKEEKGIALAQVDKEILYLDDFKSTFSVEDWENLSPEIRKKYIEDWV--NLTLLAHYADK 76 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 K A + + + + + + E ++ + + + + + Sbjct: 77 QGLNKDQAVKQKINYASKKVKANALIAKRLSEIEVSEDQLFNYFRLHQAEFQKNAVEYNI 136 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 +K+ + +Q+ + +++++++ G + + Sbjct: 137 RRIALMDKISAENVLQQ--------LSQGMSFTEAVQRYSTEELKNRGGFMGMVSATGTD 188 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKH 300 F ++ + N + + + + +A + + K ++ Sbjct: 189 SLFWLKARELKENEYGLVYKEPMWYVFQVVESKITPQEANFEDYRAEIKRKVLLEKQDQV 248 Query: 301 EAEYVKKLRSN-AIIHYY 317 E +K+++S + I+YY Sbjct: 249 YQELIKEIKSQTSEIYYY 266 >gi|239941819|ref|ZP_04693756.1| putative lipoprotein [Streptomyces roseosporus NRRL 15998] gi|239988279|ref|ZP_04708943.1| putative lipoprotein [Streptomyces roseosporus NRRL 11379] gi|291445266|ref|ZP_06584656.1| lipoprotein [Streptomyces roseosporus NRRL 15998] gi|291348213|gb|EFE75117.1| lipoprotein [Streptomyces roseosporus NRRL 15998] Length = 217 Score = 43.1 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 17/148 (11%), Positives = 45/148 (30%), Gaps = 11/148 (7%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ------- 66 + + P++S + GE I + +R A ++ Sbjct: 5 RRTALTVLAATLVAAPLLSACGNQAHPGAAAVVGGERIEVSAVQERAAEVRAAQESSPQA 64 Query: 67 ----KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 +G+L + + LI + + E +G+T + G + + Sbjct: 65 AQLVNKSGQLNRAKLHGLIFGRILDRAAEDAGVTVSRKEIQEMRQAGLAQQGGEEQFEAM 124 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 L ++ + + + + P + + Sbjct: 125 MLQQRWVAPDQIDADMRQEVQLPKLARA 152 >gi|260665523|ref|ZP_05866369.1| protease maturation protein [Lactobacillus jensenii SJ-7A-US] gi|260560644|gb|EEX26622.1| protease maturation protein [Lactobacillus jensenii SJ-7A-US] Length = 304 Score = 43.1 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 39/274 (14%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 G IT + K + + + K + +I+ KQ+ K + + Sbjct: 35 GGKITQDEYYKELK-------SSQAGKSTLANMIIYRALKQQYGKKVTQKQVDKEYNAYK 87 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 F S L++ G + FK+ + + +K +I Sbjct: 88 ------KQYGSSFESALEQNGYTTSSFKKNIKTNLLTVAALK------------DIKKIT 129 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKI 226 K + + Y + + I +K V + +K++ Sbjct: 130 SKQEQKAWKSYQPKVTVQHILVSKKSTAEDV-------IKQLKSGTSFATLAKKYSIDSA 182 Query: 227 HDVSIGKAQYLLESD--LHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEI 282 GK +D L F+ K +N TT P TQ G E I + G Sbjct: 183 TKNKGGKLTAFDSTDTTLDSDFKTAAFKLKNGEYTTTPVKTQSGYEIIKMIKHPSKGKFS 242 Query: 283 ALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314 K + Q + + ++ + + I Sbjct: 243 DHKKEIDEQIYQSMEQDTTTMQSVIRTVLKKSDI 276 >gi|77407178|ref|ZP_00784161.1| rotamase family protein [Streptococcus agalactiae H36B] gi|77174213|gb|EAO77099.1| rotamase family protein [Streptococcus agalactiae H36B] Length = 295 Score = 43.1 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 37/297 (12%), Positives = 76/297 (25%), Gaps = 30/297 (10%) Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET 84 + + + + T+ G+ IT D ++ K A Q ++ Sbjct: 1 MSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVK----------TSKAAQQSMLTLI 50 Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 L + + G V+ + + A+ G S + Q Sbjct: 51 LSRVFDTQYGDKVSDKKVSEAYNKTAKGYGNSFSSAL-------SQAGLTPEGYKQQIRT 103 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 +V+ E + Y T + I + V K +K Sbjct: 104 TMLVEYAVKEAAKKELTEA------NYKEAYKNYTPETSVQVIKLDAEDKAKSVLKDVKA 157 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQ 264 ++ K+ + S G L + + F+ + + T Sbjct: 158 DGADFAKIAKEKTTATDKKVEYKFDSAG--TTLPKEVMSAAFKLDKNGVSDVVSTVDSTT 215 Query: 265 K--GVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAIIHY 316 I + DK + + + K L K + + K A + Sbjct: 216 YKTSYYIIKVTDKTEKKSDWKSYKNRLKEVILKDKTSDRAFQNKVISKALEKANVKI 272 >gi|256847527|ref|ZP_05552973.1| peptidylprolyl isomerase [Lactobacillus coleohominis 101-4-CHN] gi|256716191|gb|EEU31166.1| peptidylprolyl isomerase [Lactobacillus coleohominis 101-4-CHN] Length = 307 Score = 43.1 bits (99), Expect = 0.054, Method: Composition-based stats. Identities = 29/282 (10%), Positives = 72/282 (25%), Gaps = 26/282 (9%) Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 A ++ T +G IT + + K +Q++I++ + +++ K Sbjct: 5 AACGNKAVATTSGGKITQDEYYSSMKNTSQ-------GKAVLQQMILDKVLQKQYGKEVS 57 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 D N + ++ + + +K Q +++ Sbjct: 58 KADVNKEYNSYKSQYGSSFSAVLQQQNLTEK----------TFKDQIKSRLLLEAAVRHY 107 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 I +K + + + Q + + Sbjct: 108 STFSNKAINKQWKKYEPKVETAEI------LVGSEDDAKDIISQLDSTSGNKYKKFKKLA 161 Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICD 274 +K ++K + S + T P T G + I + Sbjct: 162 KSKSTDTSNKSTGGIVPAFDNTSTSVDSAYKKAAFALKTGEYTKEPVKTDNGYQVIYMVK 221 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314 G + A A L + + + + K+ + Sbjct: 222 HPAKGAKSAHIADLKTKIVQQNMNNQSFMEKVISKVLKKGNV 263 >gi|88704442|ref|ZP_01102156.1| conserved hypothetical protein [Congregibacter litoralis KT71] gi|88701493|gb|EAQ98598.1| conserved hypothetical protein [Congregibacter litoralis KT71] Length = 263 Score = 43.1 bits (99), Expect = 0.054, Method: Composition-based stats. Identities = 28/266 (10%), Positives = 57/266 (21%), Gaps = 26/266 (9%) Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 A L L + E I V E L + + + R + E Sbjct: 5 AYLSLNDQDSSNEDIVVSVAQQEQLIAAYTRVWRRPPKALELKGLLDDYIREEIANREAL 64 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + F E E+ + + Sbjct: 65 ALGFAANDPVVRRRLRQKYESFMDQ------FAASVEPSEDELQQWYETRMTDYSEDARY 118 Query: 181 RTVLFSIPDNKLQNQ--------GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ ++ + +A+ + + E G Sbjct: 119 SLRHRFFSSDRREDARGDAASALAGLAPADPEADPALGDALAMPQRYEDTRETELASRFG 178 Query: 233 KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSA 290 + S L + P + G + I R A++A + Sbjct: 179 QGFTDSLSALPE----------GRWSGPVPSAYGYHLVFIESVRARAQPPLGAVRAAVLR 228 Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHY 316 +EK E L + Sbjct: 229 DWRAEHVEKAREELYASLLDRYTVKI 254 >gi|323466514|gb|ADX70201.1| Protease maturation protein [Lactobacillus helveticus H10] Length = 301 Score = 43.1 bits (99), Expect = 0.054, Method: Composition-based stats. Identities = 29/285 (10%), Positives = 72/285 (25%), Gaps = 37/285 (12%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + F + ++ S + ++ + + +T + K I K Sbjct: 5 VKVFLTSSAFLLAFSLTGCSKSNNTEVAQYGKNKKVTQEEFYKAIKTSPSS-------KT 57 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + L++ ++ K + N + E + + + Sbjct: 58 ILANLLIYDALNEQYGKKLSSKAVN----------QEYNNYKERYGDQFASFLSQNGYTT 107 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + K + + ++ ++ +L + + Sbjct: 108 TSFRRMIKINLLSKIALKAQIKPTDKQLKKEW----KTYSPSVTVQHILTTDKNTANT-- 161 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLES--DLHPQFQNLLKK 252 + + +K++ + GK + L F++ K Sbjct: 162 ---------VIQKLNNGTSFASLAQKYSVDSSSSSNGGKIAAFNKDNKQLDSSFKDTAYK 212 Query: 253 SQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 +N TT P T G E I + G K L Sbjct: 213 LKNGEYTTTPVKTTNGYEIIKMIKHPAKGNFEENKQDLINNLYDK 257 >gi|296134356|ref|YP_003641603.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermincola sp. JR] gi|296032934|gb|ADG83702.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermincola potens JR] Length = 183 Score = 43.1 bits (99), Expect = 0.057, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 56/162 (34%), Gaps = 10/162 (6%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL----- 63 +S K + +I + +V SS T+NG I+ + +K+ ++ Sbjct: 1 MSGKRKTYIFALLGLIILVSIVVFLTKSNGSSDKVATVNGVSISKQEFNKQYKMILSYYE 60 Query: 64 -----KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 K L++ + L+ + + QE +K I VN + Q + + Sbjct: 61 TIARKLSDKEKKGLQEEVLARLVDKAIILQEAQKRNIVVTDEEVNKYISQKFKGNKKLQD 120 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 ++ +Y + D+V ++ + ++ Sbjct: 121 EYLKERSLTLKDYKEVVRYQKTREKLYDIVTKNYKYEDKPIQ 162 >gi|295114096|emb|CBL32733.1| PPIC-type PPIASE domain. [Enterococcus sp. 7L76] Length = 342 Score = 43.1 bits (99), Expect = 0.057, Method: Composition-based stats. Identities = 24/313 (7%), Positives = 77/313 (24%), Gaps = 41/313 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + + S + + S+ T+ G IT D +I + Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A ++++ + +++ + + + E + Sbjct: 54 AFSQMVIYKVFEEKYGD-------KVTDKAIQKKFDDAKKQVEAQGGKFSDALTQAGLTE 106 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + ++ + ++ + + Q Sbjct: 107 KSFKKQLKQAEAMQVGLKDHLKITDEDLKTAWASFHPEVEAQII---------------Q 151 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQF--QNLLKK 252 + K ++ + + GK ++ +S P + K Sbjct: 152 VASEDDAKAVKKEITDGGDFAKIAKDKSTDAATKKDGGKIKFDSQSTTVPAEVKEAAFKL 211 Query: 253 SQNNTTNPYVTQKG------VEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEK--HEAE 303 + P + + + G + + + TK+ +++ Sbjct: 212 KDGEVSEPIAATNAQTYQTTYYVVKMTKNKAKGNDMKPYEKEIKKIAEDTKLADPTFQSK 271 Query: 304 YVKKLRSNAIIHY 316 + A + Sbjct: 272 VISDELKAANVKI 284 >gi|257080935|ref|ZP_05575296.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis E1Sol] gi|256988965|gb|EEU76267.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis E1Sol] Length = 342 Score = 43.1 bits (99), Expect = 0.058, Method: Composition-based stats. Identities = 24/313 (7%), Positives = 78/313 (24%), Gaps = 41/313 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + + S + + S+ T+ G IT D +I + Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A ++++ + +++ + + + E + Sbjct: 54 AFSQMVIYKVFEEKYGD-------KVTDKAIQKKFDDAKKQVEAQGGKFSDALTQAGLTE 106 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + ++ + ++ + + Q Sbjct: 107 KSFKKQLKQAEAMQVGLKDHLKITDEDLKTAWASFHPEVEAQII---------------Q 151 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF--QNLLKK 252 + K ++ + ++ GK ++ +S P + K Sbjct: 152 VASEDDAKAVKKEITDGGDFAKIAKDKSTDTATKKDGGKIKFDSQSTTVPAEVKEAAFKL 211 Query: 253 SQNNTTNPYVTQKG------VEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEK--HEAE 303 + P + + + G + + + TK+ +++ Sbjct: 212 KDGEVSEPIAATNAQTYQTTYYVVKMTKNKAKGNDMKPYEKEIKKIAEDTKLADPTFQSK 271 Query: 304 YVKKLRSNAIIHY 316 + A + Sbjct: 272 VISDELKAANVKI 284 >gi|54113793|gb|AAV29530.1| NT02FT0767 [synthetic construct] Length = 476 Score = 43.1 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 14/165 (8%), Positives = 41/165 (24%), Gaps = 6/165 (3%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M L + + IF I + + + S + I+ + Sbjct: 1 MLQSFNDRLKGPFTWIVVISISFIFVISGMTFFFTNIGSRAYVAKVGDNEISSQQFQQYA 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 E ++ + ++I + L + ++ I + + + Sbjct: 61 Q----SATTEEQKRAILSQMIDQYLILADAQRHDIVVSKLALQSAIFTNPMFF--DKDGK 114 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 S + + Q + ++ + + I Sbjct: 115 FSAEKLKQVVAYLGGMDKLEQILAQNIQATIIPKTIVDTSIVIDY 159 >gi|72383061|ref|YP_292416.1| hypothetical protein PMN2A_1223 [Prochlorococcus marinus str. NATL2A] gi|72002911|gb|AAZ58713.1| conserved hypothetical protein [Prochlorococcus marinus str. NATL2A] Length = 248 Score = 43.1 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 18/202 (8%), Positives = 46/202 (22%), Gaps = 1/202 (0%) Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 + L+ + + + D + + Sbjct: 36 KIYIDEKRKEELILEFKKQQNIIEDDKYKNFLNINHLNDYDVEDIALGKTRIYEYSLKNF 95 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 + +L R I L + + + +F+ I + Sbjct: 96 GHKIESWFLERKSQLDIIVYSLIRVSDPFIARELYLRILSKETDIGDLATEFSEGIEKKT 155 Query: 231 IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 G + + HP N P I + + + +K + Sbjct: 156 RGIVGPISIGNSHPSLANFLQNCEIGKVQPPLKINNSFLIIRVENFEPAKLDEDMKKNMG 215 Query: 290 AQNTPTKIEKHEAEYVKKLRSN 311 + ++ + ++KL N Sbjct: 216 EELLNKWLDIQADDMIEKLIKN 237 >gi|322385853|ref|ZP_08059496.1| peptidyl-prolyl cis-trans isomerase [Streptococcus cristatus ATCC 51100] gi|321270138|gb|EFX53055.1| peptidyl-prolyl cis-trans isomerase [Streptococcus cristatus ATCC 51100] Length = 376 Score = 43.1 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 28/299 (9%), Positives = 76/299 (25%), Gaps = 40/299 (13%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + +F +V + + A I T+ GE IT + ++ N Sbjct: 19 MKKKILTGAVTLFSVVALAACSQTAKDKDIV-TMKGETITVSEFYDQVK-------NNGS 70 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + + ++ ++ + +++ K + + + S + Sbjct: 71 SQQVLLQMAIKQVFEEKYGKKVTDKEVEEAFEKMKSAYGSAFQNVLAQSGMTED------ 124 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 Q +V+ E E+ + K T + ++ + K Sbjct: 125 ----AYRDQIRANKLVEYAVK---KAAEKELTDDNYKAFFETYTPEVTAQIIKVDSEEKA 177 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF--QNL 249 + K ++ ++ G+ ++ S + Sbjct: 178 KEVLEKAKA---------EGADFGQLAKENSTDKDTKDKGGEVKFDSTSTTVADAVKKAT 228 Query: 250 LKKSQNNTTNPYVTQK------GVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE 301 +N ++ + + + K + K L K Sbjct: 229 FALEENGVSDVITVRGKQNYSASYYIVKLVKKTQKSAKWTDYKKQLKEGILTQKQNDAS 287 >gi|158605272|gb|ABW74882.1| conserved hypothetical protein [Sphingomonas sp. ATCC 53159] Length = 290 Score = 43.1 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 26/282 (9%), Positives = 73/282 (25%), Gaps = 48/282 (17%) Query: 41 RIRTTINGEVITDGDISKRIA--LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98 ++ +++GE IT +++ + + E++A+Q +I + + + + Sbjct: 31 QVVASVDGEEITVFELNAELQASQVPPGTDRKLAEQLALQRIIERKILAKVAREQKLDKT 90 Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY-G 157 + A + I ++++ Sbjct: 91 PAFLIQE-------------------------------RRADELILTAMLRDKIAGGIAQ 119 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + EI + + + + +K ++ +L D Sbjct: 120 PTDAEIEKYQAAHPERFAQRKIYAIDQVVFAPPSSAAKLKQFAPLKTLDQLTAKLSADNV 179 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + + S+ + + L P+ + TQ+G+ I Sbjct: 180 QFRRAPSQ-----------IDTAALPPEIAAKIASLPAQEMFILPTQQGLTANIITSTTV 228 Query: 278 LGGEIALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNA--IIHY 316 L ++ + K + A + Y Sbjct: 229 LPVPADQAREIALSGLRTERFGKAADAQLNDRLKKARETVKY 270 >gi|20806943|ref|NP_622114.1| hypothetical protein TTE0434 [Thermoanaerobacter tengcongensis MB4] gi|20515421|gb|AAM23718.1| hypothetical protein TTE0434 [Thermoanaerobacter tengcongensis MB4] Length = 241 Score = 43.1 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 45/155 (29%), Gaps = 9/155 (5%) Query: 38 MSSRIRTTINGEVITDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 I +NG I + R L L + ++ + +L+ E +K+ K + Sbjct: 62 NEGDIIAEVNGIPIYKNEFELRKGLTLASDEQINDINNFVLNKLVREKVKEYLAMKYNLK 121 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL--------AIQSIWPDVV 148 + +N + + + E + +++Y ++ + Sbjct: 122 VSEDEINSYIEKEKQQFKEFPEAEKKLKELISASGMTYEEYWNDYERYNVKRMLLFDKLY 181 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 N E++ ++Y + Sbjct: 182 NAIVDEGIKNGELKKTDKMTIEVQNEYKKYFDNII 216 >gi|297537942|ref|YP_003673711.1| EpsD family peptidyl-prolyl cis-trans isomerase [Methylotenera sp. 301] gi|297257289|gb|ADI29134.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Methylotenera sp. 301] Length = 338 Score = 43.1 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 28/287 (9%), Positives = 71/287 (24%), Gaps = 46/287 (16%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQK--INGELEKIAVQELIVETLKKQEIEK 92 S++ +NG+ I ++ ++A L + K + +L+ + L K++ + Sbjct: 30 PVKAESQVVAKVNGDEILIHQVNFQLARLGQLNEAQSKLAAKQILSKLVEQQLLKKQAIE 89 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 + + D + + + + ++ Sbjct: 90 TKLDRDPTVLLAI------------------------------EASKDEILSQAYLEQLM 119 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL--QNQGFVQKRIKDAEESRL 210 + EI + + + ++ R I NK K IK E Sbjct: 120 LKANKPSASEIDSFYKSHPELFENRHVFRLQELVIEVNKDKFAEVQNNLKAIKGINEIAT 179 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 L + ++ L L+ + T + + + Sbjct: 180 WLKNNNYPFSANSN-----------VRAAEQLPLDMLKKLQLLKEGEFLIVPTDRSLNVV 228 Query: 271 AICDKRDLGGE-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + + + + L A I + Sbjct: 229 HLAAIQSAPISREKAIPIIEQYFVNQNKSTLAKNEILALNEKAKIEF 275 >gi|56707753|ref|YP_169649.1| hypothetical protein FTT_0628 [Francisella tularensis subsp. tularensis SCHU S4] gi|110670224|ref|YP_666781.1| hypothetical protein FTF0628 [Francisella tularensis subsp. tularensis FSC198] gi|224456823|ref|ZP_03665296.1| hypothetical protein FtultM_03409 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370257|ref|ZP_04986262.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874566|ref|ZP_05247276.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604245|emb|CAG45261.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320557|emb|CAL08644.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC198] gi|151568500|gb|EDN34154.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254840565|gb|EET19001.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282158924|gb|ADA78315.1| hypothetical protein NE061598_03585 [Francisella tularensis subsp. tularensis NE061598] Length = 476 Score = 42.7 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 14/165 (8%), Positives = 41/165 (24%), Gaps = 6/165 (3%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M L + + IF I + + + S + I+ + Sbjct: 1 MLQSFNDRLKGPFTWIVVISISFIFVISGMTFFFTNIGSRAYVAKVGDNEISSQQFQQYA 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 E ++ + ++I + L + ++ I + + + Sbjct: 61 Q----SATTEEQKRAILSQMIDQYLILADAQRHDIVVSKLALQSAIFTNPMFF--DKDGK 114 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 S + + Q + ++ + + I Sbjct: 115 FSAEKLKQVVAYLGGMDKLEQILAQNIQATIIPKTIVDTSIVIDY 159 >gi|227533717|ref|ZP_03963766.1| peptidylprolyl isomerase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|400854|sp|Q02473|PRSA_LACPA RecName: Full=Foldase protein prsA; AltName: Full=Protease maturation protein prtM; Flags: Precursor gi|149581|gb|AAA25247.1| maturation protein [Lactobacillus paracasei] gi|227188701|gb|EEI68768.1| peptidylprolyl isomerase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 299 Score = 42.7 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 32/286 (11%), Positives = 70/286 (24%), Gaps = 36/286 (12%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K+ + + ++S + + T +G +T+ + K + Sbjct: 4 KMRLKVLLASTATALLLLSGCQSNQADQKVATYSGGKVTESNFYKELK-------QSPTT 56 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 K + +++ KS T N + Q + + F Sbjct: 57 KTMLANMLIYRALNHAYGKSVSTKTVNDAYDSYKQQYGENFDAFLSQNGFSRSSFKESLR 116 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + V + + ++ +L S D Q Sbjct: 117 TNFLSEVALKKLKKVSESQLKAVWKT--------------YQPKVTVQHILTSDEDTAKQ 162 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLES-DLHPQFQNLLK 251 + + + + GK + + L F++ Sbjct: 163 VISDLAA-----------GKDFATLAKTDSIDTATKDNGGKISFESNNKTLDATFKDAAY 211 Query: 252 K-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 K + T P G E I + + G + K L+A Sbjct: 212 KLKNGDYTQTPVKVTNGYEVIKMINHPAKGTFTSSKKALTASVYAK 257 >gi|257870832|ref|ZP_05650485.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus gallinarum EG2] gi|257804996|gb|EEV33818.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus gallinarum EG2] Length = 342 Score = 42.7 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 36/312 (11%), Positives = 83/312 (26%), Gaps = 40/312 (12%) Query: 16 LTTYFVLIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 + +L + +++ + + SS T+ G IT D + Q + + Sbjct: 1 MKKKLILAAVSALSVLTLAACSGSSSNEIATMKGGKITVEDFYE-------QAKTDQNNQ 53 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 +++LI + K +K G ++ + Q A+ G S + S+ Sbjct: 54 SLIRQLI---VLKVFDQKYGDDVTEKMIDKQYDQTAKQYGDSDKFESALEAS-----GLT 105 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 K+ Q ++ + E+ A + + + Sbjct: 106 KKSYREQIRQQLALQEGLKANMDIGDDELKAAWDSFHPEVEAQLI-------------KL 152 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL--LKK 252 + E + EK G ++ S P Sbjct: 153 TSEDDAKDVLKEAQKDGADFSKLAKEKSTDTATAEDGGTVKFDSTSTTVPAEVQTAAFAL 212 Query: 253 SQNNTTNPYVTQK------GVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK--HEAE 303 + + + +D G ++ K ++ T + A+ Sbjct: 213 KDGEISEVISATDASTYTTSYYIVKMVKNQDKGNDMDKYKDQITEIAQNTLLNDSTFVAK 272 Query: 304 YVKKLRSNAIIH 315 + K A + Sbjct: 273 TIGKELKAANVK 284 >gi|31983504|ref|NP_858118.1| peptidylprolyl isomerase [Lactococcus lactis subsp. cremoris] gi|13491881|gb|AAK27980.1|AF247159_5 PrtM precursor [Lactococcus lactis subsp. cremoris] Length = 299 Score = 42.7 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 32/286 (11%), Positives = 72/286 (25%), Gaps = 36/286 (12%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K+ + + ++S + + T +G +T+ K + Sbjct: 4 KMRLKVLLASTATALLLLSGCQSNQTDQTVATYSGGKVTESSFYKELK-------QSPTT 56 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 K + +++ KS T N + Q + + F Sbjct: 57 KTMLANMLIYRALNHAYGKSVSTKTVNDAYDSYKQQYGENFDAFLSQNGFSRSSFKES-- 114 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 ++ +F+ + +++ + Q + + D Sbjct: 115 --------------LRTNFLSEVALKKLKKVSESQLKAAWKTYQPKVTVQHILTSDEDTA 160 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQY-LLESDLHPQFQNLLK 251 Q + + + GK + L L F++ Sbjct: 161 KQV---------ISDLASGKDFAMLAKTDSIDTATKDNGGKISFELNNKTLDATFKDAAY 211 Query: 252 K-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 K + T P G E I + + G + K L+A Sbjct: 212 KLKNGDYTQTPVKVTDGYEVIKMINHPAKGTFTSSKKVLTASVYAK 257 >gi|260904425|ref|ZP_05912747.1| SurA-like protein [Brevibacterium linens BL2] Length = 254 Score = 42.7 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 11/147 (7%) Query: 41 RIRTTINGEVITDGDI-----------SKRIALLKLQKINGELEKIAVQELIVETLKKQE 89 ++ +NGE IT D + Q +L+ + L+ L QE Sbjct: 57 KVVAEVNGEKITKDDFVPLYETQYQQMQMQSQQSGQQVDEKQLKTQTAENLVSTELLSQE 116 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 EK I V+ + A+++ +S +DF + + KQG+ + L Q ++K Sbjct: 117 AEKRDIKVSDKDVDKGLEESAKSSQMSKKDFLAAMKKQGMDEKKVHAELKTQLAIEGLIK 176 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVR 176 +++ + E A +Q Sbjct: 177 DEYGEFKASGEDIGQAYQQAKTQQEQM 203 >gi|199599418|ref|ZP_03212812.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus rhamnosus HN001] gi|199589671|gb|EDY97783.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus rhamnosus HN001] Length = 300 Score = 42.7 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 33/299 (11%), Positives = 78/299 (26%), Gaps = 35/299 (11%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82 I+ + V+ SS + G +T + + + ++ +IV Sbjct: 5 ILGVVGLFVAVTLAGCSSSTVANMKGAKVTKDEYYDAMK-------KTTTGQATLRNMIV 57 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 +Q+ N+ + ++ S + + + + Q Sbjct: 58 LKALEQQYPNKVSDKKVNSQFNKLKKQYGSSFDSTLEQNGYTES----------SFKDQI 107 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202 + +I + +K + + ++ + ++ I Sbjct: 108 RTTLYSEVALKDMKKPTTKQIESQWKKYQPKIQ-----------VQHILVKTEDEAKQII 156 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL--LESDLHPQFQNLLKK--SQNNTT 258 D ++ + + GK ++ L F++ K + T Sbjct: 157 SDYQKDPTEKNFESLAKKNSIDNGTKNKGGKLAAFDNTDTSLDSTFKSAAFKLKKAGDIT 216 Query: 259 N-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP--TKIEKHEAEYVKKLRSNAII 314 P TQ G I + G K L Q + K+ A + Sbjct: 217 TTPVKTQYGYHVIRVISIAKKGTMKEHKKDLEKQIYTSWQSDSTVMNGIITKVLKKANV 275 >gi|29830081|ref|NP_824715.1| lipoprotein [Streptomyces avermitilis MA-4680] gi|29607191|dbj|BAC71250.1| putative lipoprotein [Streptomyces avermitilis MA-4680] Length = 219 Score = 42.7 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 15/149 (10%), Positives = 43/149 (28%), Gaps = 15/149 (10%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI------------- 60 + I P+++ + G+ IT + R+ Sbjct: 5 RRTALVLSAAIVAAAPLLTACGGEAHPGAAAVVGGQRITVAQLESRVNEVRTAQRAATTD 64 Query: 61 --ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 + G L + + L+++ + + + +G++ + G + Sbjct: 65 DAQYEQTIAKTGSLTRDTLHSLVLDRVLDRAAKDAGVSVTRKDAQQMRTALEQQAGGTKA 124 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 S++L + G+ L + + Sbjct: 125 LESAWLQQYGVAPGRLDDSLRTEIEAQKL 153 >gi|225018196|ref|ZP_03707388.1| hypothetical protein CLOSTMETH_02133 [Clostridium methylpentosum DSM 5476] gi|224948993|gb|EEG30202.1| hypothetical protein CLOSTMETH_02133 [Clostridium methylpentosum DSM 5476] Length = 333 Score = 42.7 bits (98), Expect = 0.069, Method: Composition-based stats. Identities = 29/330 (8%), Positives = 81/330 (24%), Gaps = 39/330 (11%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIR----------------TTINGEVITDGDISKR 59 + + + I+ + + T+NGE + D+ Sbjct: 1 MKKIICIALAAILTFGALSGCGKDASSASSASSSTSSATEKTGYLTVNGETV---DVPFV 57 Query: 60 IALLKLQKINGELEKIAVQ-----ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 + + + + E + T D ++ + A G Sbjct: 58 MKFDEYEVPIEHFRYYYLNIRDQYSYSATDTTDLEQKVMDETMDYLKTDFALKKLAEREG 117 Query: 115 LSAEDFSSF---LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 ++ D + Q N + + + DF L+ + Sbjct: 118 ITLTDDDNATIEQSIQTTVSNMGSEEDYQSQLEQSYMTADFHRTLLELDTLNSKLLSTLF 177 Query: 172 NITVREYLIRTVL----FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 + L + + + ++A E + + +++ Sbjct: 178 EEGGKYALSEQDITDTIHQEFIHVSHMLISDEATAQEALERVQAGEDFDSLVAEYSEDSG 237 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286 G ++ +F++ + T+ + G I L + + Sbjct: 238 MGEEGY--TFTYGEMVQEFEDAAYALQEGETSGLVQSTYGYHIIK-----RLPLDETYIS 290 Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 T + + + + ++ I Y Sbjct: 291 ENLDTMTSSVKKSELNKLLDEISEAFTITY 320 >gi|116326589|ref|YP_796510.1| peptidylprolyl isomerase [Lactococcus lactis subsp. cremoris SK11] gi|122064922|sp|Q02VE3|PRSA_LACLS RecName: Full=Foldase protein prsA; AltName: Full=Protease maturation protein prtM; Flags: Precursor gi|47198|emb|CAA32349.1| unnamed protein product [Lactococcus lactis subsp. cremoris] gi|76574943|gb|ABA47412.1| peptidyl-prolyl isomerase, maturation protein [Lactococcus lactis] gi|116108957|gb|ABJ74079.1| Parvulin-like peptidyl-prolyl isomerase [Lactococcus lactis subsp. cremoris SK11] Length = 299 Score = 42.7 bits (98), Expect = 0.071, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 87/286 (30%), Gaps = 36/286 (12%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K+ + + ++S + + T +G +T+ K + Sbjct: 4 KMRLKVLLASTATALLLLSGCQSNQTDQTVATYSGGKVTESSFYKELK-------QSPTT 56 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 K + +++ K + + TVN + + + G E+F +FL + G + Sbjct: 57 KTMLANMLIYRALNHAYGK---SVSTKTVNDAYDSYKQQYG---ENFDAFLSQNGFSRSS 110 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 FK+ L + +K K +++ + ++ +L S D Q Sbjct: 111 FKESLRTNFLSEVALKKL--KKVSESQLKAAWKTY------QPKVTVQHILTSDEDTAKQ 162 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQY-LLESDLHPQFQNLLK 251 + + + + GK + L L F++ Sbjct: 163 VISDLAA-----------GKDFAMLAKTDSIDTATKDNGGKISFELNNKTLDATFKDAAY 211 Query: 252 K-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 K + T P G E I + + G + K L+A Sbjct: 212 KLKNGDYTQTPVKVTDGYEVIKMINHPAKGTFTSSKKALTASVYAK 257 >gi|302560250|ref|ZP_07312592.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302477868|gb|EFL40961.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length = 215 Score = 42.7 bits (98), Expect = 0.073, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 40/123 (32%), Gaps = 15/123 (12%) Query: 43 RTTINGEVITDGDISKRI---------------ALLKLQKINGELEKIAVQELIVETLKK 87 + GE IT + R+ + G L + + ++++ + + Sbjct: 34 AAVVGGERITVSQLENRVDEVRAAQRAAVPDDAQYQQAIARTGTLTRDTLHSMVLDRVLE 93 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + +G++ V + TG + +++L + GI +Q + Sbjct: 94 RAARDAGVSVTRKEVQQMRSGLEQQTGGAEALEAAWLQQYGIPPQRLDDNFRLQVQAQKL 153 Query: 148 VKN 150 + Sbjct: 154 AQR 156 >gi|294055716|ref|YP_003549374.1| hypothetical protein Caka_2186 [Coraliomargarita akajimensis DSM 45221] gi|293615049|gb|ADE55204.1| conserved hypothetical protein [Coraliomargarita akajimensis DSM 45221] Length = 291 Score = 42.7 bits (98), Expect = 0.073, Method: Composition-based stats. Identities = 23/247 (9%), Positives = 65/247 (26%), Gaps = 8/247 (3%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 G + LI+ T + ++ N A ++ + Sbjct: 30 QGPPNERDDDNLIIITDAQVAHLQARWIKQWNRTPNQLELQASVDAYVRDEILYREALRQ 89 Query: 129 IGDNHFKQYLAIQSIWPDVVK--NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 D + +++ ++E + + +Y + + F Sbjct: 90 GLDRQDPRVRLALIQKMNLLSAGRSNTDDIPQADLEAFFALRSERYQVPAQYSFQQIYFK 149 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 + + + D+E + RLP + + + + + Sbjct: 150 ADADAEAQARDLAAQFNDSEPTAERLPNYG----DHSMLVRAMHNVSEPEVARIFGNEFA 205 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEY 304 NL S++ + P + G+ + + ++ + E + + Sbjct: 206 ANLSHLSEHKWSGPVRSTYGMHVVKLTQLEQAHIPELNQVREQVETDLRYETSEAAKEQA 265 Query: 305 VKKLRSN 311 +L S Sbjct: 266 YLELASK 272 >gi|261329338|emb|CBH12319.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 383 Score = 42.7 bits (98), Expect = 0.075, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 18/81 (22%), Gaps = 1/81 (1%) Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + E L + + F+ G + F + Sbjct: 300 DAINLAQAILAQHKERKTWSLDEFVQVVRDFSECGSAKRDGDLGMVESGTYTEGFDTVAF 359 Query: 252 K-SQNNTTNPYVTQKGVEYIA 271 + P T+ GV I Sbjct: 360 SLKSGEVSAPVETELGVHLIY 380 >gi|194770449|ref|XP_001967306.1| GF15934 [Drosophila ananassae] gi|190614582|gb|EDV30106.1| GF15934 [Drosophila ananassae] Length = 389 Score = 42.7 bits (98), Expect = 0.075, Method: Composition-based stats. Identities = 15/183 (8%), Positives = 40/183 (21%), Gaps = 1/183 (0%) Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 E+ + + + N + + ++ Y Sbjct: 61 NELLEEQPDRGFDRDFSRASKQIVNWKTHPQLPYGWEERVMPHTKETYFYDTKTGKVHYT 120 Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + LK N + + + E + F ++ + E Sbjct: 121 LPRNDPLKCRNPKGAFNFRMRCRHILIKHEESETRISFWQKRVLRTKAEAFERITRVREM 180 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNNTTNPYVTQKG 266 R K + G + + L + + ++ + T G Sbjct: 181 IRTGKMKFALAASVVSDCCTARKGGDMGSIRLGETLLDFEVAVARLEMYELSDIFETDSG 240 Query: 267 VEY 269 Sbjct: 241 YHI 243 >gi|146318892|ref|YP_001198604.1| parvulin-like peptidyl-prolyl isomerase [Streptococcus suis 05ZYH33] gi|145689698|gb|ABP90204.1| Parvulin-like peptidyl-prolyl isomerase [Streptococcus suis 05ZYH33] gi|292558552|gb|ADE31553.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Streptococcus suis GZ1] Length = 348 Score = 42.7 bits (98), Expect = 0.075, Method: Composition-based stats. Identities = 28/318 (8%), Positives = 77/318 (24%), Gaps = 42/318 (13%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70 +K + + + + T+ G IT + +++ Sbjct: 14 SLMKQTKKILAGAVTLFAAVTLAACSNAADKDIITMKGNTITVSEFYEKVK-------TN 66 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + + +++ + + + G + VN + + A G S Sbjct: 67 SQAQQVLLSMVISNVFE---NQYGDKVSAEEVNKEYDKKAEQLGASFNAAL-------SS 116 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 ++ Q +V+ E E+ K + V+ + Sbjct: 117 AGLTEESYKEQIRTNKLVEYAVKQAA---EKELTDENYKAAYDAYTPEVTARVIKLADEA 173 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQ--FQ 247 K + + + ++ + G+ ++ S P + Sbjct: 174 KAKEVLAAAQA---------EGADFAQLAKDNSTDTTTKDNGGEVKFDSTSTTVPAEVQK 224 Query: 248 NLLKKSQNNTTNPYVTQ-------KGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEK 299 + ++ + + K + + K L K Sbjct: 225 AVFALDAGQVGASVISSVDMKTYTTSYYVVKLDAKSEKSAKWEDYKDKLKEIILAQKQRD 284 Query: 300 --HEAEYVKKLRSNAIIH 315 A +K+ A + Sbjct: 285 SSFVATVLKEALQKANVK 302 >gi|72391154|ref|XP_845871.1| hypothetical protein [Trypanosoma brucei TREU927] gi|62175503|gb|AAX69643.1| hypothetical protein, conserved [Trypanosoma brucei] gi|70802407|gb|AAZ12312.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 383 Score = 42.7 bits (98), Expect = 0.075, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 18/81 (22%), Gaps = 1/81 (1%) Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + E L + + F+ G + F + Sbjct: 300 DAINLAQAILAQHKERKTWSLDEFVQVVRDFSECGSAKRDGDLGMVESGTYTEGFDTVAF 359 Query: 252 K-SQNNTTNPYVTQKGVEYIA 271 + P T+ GV I Sbjct: 360 SLKSGEVSAPVETELGVHLIY 380 >gi|17230169|ref|NP_486717.1| hypothetical protein all2677 [Nostoc sp. PCC 7120] gi|17131770|dbj|BAB74376.1| all2677 [Nostoc sp. PCC 7120] Length = 225 Score = 42.7 bits (98), Expect = 0.075, Method: Composition-based stats. Identities = 7/146 (4%), Positives = 32/146 (21%), Gaps = 1/146 (0%) Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + +L + L + + + + ++ Sbjct: 74 EKFKQATWGHKVESYFLTQKAQLDQVTYSLLRTRDMALAQELYFRIKAKEQSFAEIARQY 133 Query: 223 ASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + + G + L P + + + + + Sbjct: 134 SQGPEAQTGGLIGPTPLTQPHPQLVAKLRASQPGQLLPPTRLGEWIVIVRLEQMVHAKLD 193 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKK 307 + + L + +++ + K Sbjct: 194 DSTRKKLLNKLFQEWLQESLQATLNK 219 >gi|150006852|ref|YP_001301595.1| peptidyl-prolyl cis-trans isomerase [Parabacteroides distasonis ATCC 8503] gi|255016117|ref|ZP_05288243.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_7] gi|256842537|ref|ZP_05548039.1| peptidyl-prolyl cis-trans isomerase [Parabacteroides sp. D13] gi|262384400|ref|ZP_06077535.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_33B] gi|298377277|ref|ZP_06987230.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_19] gi|301308674|ref|ZP_07214626.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 20_3] gi|149935276|gb|ABR41973.1| peptidyl-prolyl cis-trans isomerase [Parabacteroides distasonis ATCC 8503] gi|256735893|gb|EEU49225.1| peptidyl-prolyl cis-trans isomerase [Parabacteroides sp. D13] gi|262294103|gb|EEY82036.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_33B] gi|298265691|gb|EFI07351.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_19] gi|300833198|gb|EFK63816.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 20_3] Length = 711 Score = 42.7 bits (98), Expect = 0.076, Method: Composition-based stats. Identities = 19/231 (8%), Positives = 59/231 (25%), Gaps = 17/231 (7%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 ++ +I K K E + +K ++ D + Sbjct: 238 EVSKSEIEKLYNQRKELYKQKESK----------VIKYIAVDIRPSKEDYDKAQAEIESL 287 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 S + + + P++ + + G + + N + Sbjct: 288 KEELATSERVADVVNENSEVPYVDAFFTEKA--LDPEMKQFATTSEVGAVYGPVFENDKY 345 Query: 170 MKNIT-VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + +V S +++ + +K+++ Sbjct: 346 RMFKLVDKTVAPDSVKVSHIMLAGKSEAETTALADSLMGALKGGANFAELAKKYSADQAA 405 Query: 229 VSIGKAQYLLESD----LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 + G+ + E ++ F+ + + N + G + + +K Sbjct: 406 ENGGELGWFTEVTALRGVNDDFKKAVFSTPLNEVAVVKSLYGTHLVKVTEK 456 >gi|85716537|ref|ZP_01047508.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter sp. Nb-311A] gi|85696726|gb|EAQ34613.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter sp. Nb-311A] Length = 582 Score = 42.7 bits (98), Expect = 0.079, Method: Composition-based stats. Identities = 31/376 (8%), Positives = 79/376 (21%), Gaps = 83/376 (22%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK----RIALLKLQ----K 67 + +++ F I I S T+ I+ + R+ + Q Sbjct: 3 IVMGLLIVAFGIWGIADIFQGFGQSA-LATVGNTEISTEQFRQIYTDRLQQIGRQFGRTL 61 Query: 68 INGELE-----KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN---TGLSAED 119 ++ + +Q++I E ++ + G+ ++ + G Sbjct: 62 PPDQVRALGIDRQILQQVIAEAALDEDARRKGLEVSDKEISRQIMSDPNFKGANGAFDPA 121 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL-------------------- 159 + L +Q + Sbjct: 122 RFAGLIRQLGYTEQRYVTEQRNLALRRQIVGTVTAGVEPSTKLLEALNRFQNEQRTIDYV 181 Query: 160 --------------EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ------ 199 E ++ K + + ++ V Sbjct: 182 KLGAAQAGSIDPPTEAQLSGYFDAHKVQFRAPEYRKIAFVVLTPEEVAKWTTVSDDDAKK 241 Query: 200 ------------KRIKDAEESRLRLPKDCNKLEKFASKIH----------DVSIGKAQYL 237 +R K + + EK AS S + Sbjct: 242 VYEQRKDKLSTPERRKIWQIIFPSVADAQAAREKIASGASFDDIAKERNLATSDIDLGTI 301 Query: 238 LESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 ++ + ++ + P + GV + + G ++ + Sbjct: 302 SRPEIVDPAVAEAAFSLKTDDVSQPIQGKFGVALVKVSKIEP--GNQPTYDSVATKLKHD 359 Query: 296 KIEKHEAEYVKKLRSN 311 V L + Sbjct: 360 IAVDRGRAEVNNLHNK 375 >gi|85703584|ref|ZP_01034688.1| hypothetical protein ROS217_22622 [Roseovarius sp. 217] gi|85672512|gb|EAQ27369.1| hypothetical protein ROS217_22622 [Roseovarius sp. 217] Length = 604 Score = 42.7 bits (98), Expect = 0.080, Method: Composition-based stats. Identities = 19/254 (7%), Positives = 49/254 (19%), Gaps = 22/254 (8%) Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTG 114 L + + L+ + T + A +G Sbjct: 130 LNETQFEENIRAETASTLVQAAALAGLQTPATYLDTMMTYLAERRSLAFAVLDRSALQSG 189 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 L F + + + + E + + + Sbjct: 190 LPVPSEEDLQAYHQANLPSFTTPETKKIAFAWITPAMIIDSVEVEEAALRDAYAEREAEF 249 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 D + + R R+ + + + ++S Sbjct: 250 NLPERRLVERLIFADTEAATRA------------RARIDEGIALEMLVSERGLEMSDVDL 297 Query: 235 QYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQN 292 + DL + + P T G + + + L Q Sbjct: 298 GDVAREDLGSAAEPVFSAEAGEVVGPIDTSLGPALFRVNAILAAQVTPFEEAEPQLRDQL 357 Query: 293 TPTKIEKHEAEYVK 306 + + + Sbjct: 358 AGDRARRVIEAQID 371 >gi|114656719|ref|XP_001161176.1| PREDICTED: hypothetical protein [Pan troglodytes] gi|332843741|ref|XP_003314710.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like [Pan troglodytes] Length = 130 Score = 42.4 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 10/87 (11%), Positives = 25/87 (28%), Gaps = 9/87 (10%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK----- 251 +I +A E + +++ G ++ + FQ Sbjct: 46 EKHDKIMEAMEKLKSGMRFNEVATQYSED-KARQGGVLGWMTRGSMVGPFQEAAFALPIS 104 Query: 252 -KSQNNTTNP-YVTQKGVEYIAICDKR 276 + T+P T+ G + ++ Sbjct: 105 GMDKPVFTDPAVKTKFGYHI-MVEGRK 130 >gi|295706006|ref|YP_003599081.1| putative lipoprotein [Bacillus megaterium DSM 319] gi|294803665|gb|ADF40731.1| putative lipoprotein [Bacillus megaterium DSM 319] Length = 300 Score = 42.4 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 34/308 (11%), Positives = 84/308 (27%), Gaps = 43/308 (13%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSS--------------RIRTTINGEVITDGDISKRIALL 63 +L + ++ S+ + G +T + ++ +A+ Sbjct: 6 LKLLLAVLTAFGFLTGCGGKHSNTMFPSVEISQLSSTKELAAYEGGKVTGAEFNRFLAVE 65 Query: 64 KLQKINGEL-----EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 + L K +++L+++ + + + + + Sbjct: 66 GFLNPDAPLNDTSYRKELLRQLVMQKILI---SHLKTSDKVQKQVEDMWKQIKRSYNEDT 122 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + + Q ++ F + + E+ Y Sbjct: 123 RKQGYEVLNIRSS-----DVTNQLTNQFKLEEYFRKQITSDEL--------------TAY 163 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 R + Q A + + +K+A I A L Sbjct: 164 YKRIENDLTRVSFTQLAFSTLHDAAAAAAELQKGTSLQDVQKKYADVQTVSKIENADNLK 223 Query: 239 ESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 S L P F ++LKK ++ P K + I ++D E +K + + I Sbjct: 224 LSSLSPSFIDVLKKQHIGESSEPIKMGKVYYIL-ILKQKDKKTESEVKEEMMKELVLNHI 282 Query: 298 EKHEAEYV 305 ++ + + Sbjct: 283 NRYMQDEL 290 >gi|322829816|gb|EFZ33080.1| peptidyl-prolyl cis-trans isomerase [Trypanosoma cruzi] Length = 291 Score = 42.4 bits (97), Expect = 0.084, Method: Composition-based stats. Identities = 9/77 (11%), Positives = 20/77 (25%), Gaps = 1/77 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254 + + S L + + +++ G + +F Sbjct: 212 AEAIRARHGDQTSVWSLDEFTAVVREYSECGSAKRDGDLGVVESGTYTEKFDAAAFSLGC 271 Query: 255 NNTTNPYVTQKGVEYIA 271 + P T+ GV I Sbjct: 272 GMVSAPVETELGVHLIY 288 >gi|215959352|gb|ACJ71247.1| peptidyl-prolyl cis-trans isomerase [Trypanosoma cruzi] Length = 421 Score = 42.4 bits (97), Expect = 0.084, Method: Composition-based stats. Identities = 9/77 (11%), Positives = 20/77 (25%), Gaps = 1/77 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254 + + S L + + +++ G + +F Sbjct: 342 AEAIRARHGDQTSVWSLDEFTAVVREYSECGSAKRDGDLGVVESGTYTEKFDAAAFSLGC 401 Query: 255 NNTTNPYVTQKGVEYIA 271 + P T+ GV I Sbjct: 402 GMVSAPVETELGVHLIY 418 >gi|229548632|ref|ZP_04437357.1| peptidylprolyl isomerase [Enterococcus faecalis ATCC 29200] gi|255971145|ref|ZP_05421731.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis T1] gi|255973769|ref|ZP_05424355.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis T2] gi|256617573|ref|ZP_05474419.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis ATCC 4200] gi|256761456|ref|ZP_05502036.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis T3] gi|256957443|ref|ZP_05561614.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis DS5] gi|256964476|ref|ZP_05568647.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis HIP11704] gi|257089114|ref|ZP_05583475.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis CH188] gi|257415255|ref|ZP_05592249.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis AR01/DG] gi|257420948|ref|ZP_05597938.1| rotamase [Enterococcus faecalis X98] gi|300861731|ref|ZP_07107811.1| putative foldase protein PrsA [Enterococcus faecalis TUSoD Ef11] gi|307269720|ref|ZP_07551050.1| putative foldase protein PrsA [Enterococcus faecalis TX4248] gi|307272499|ref|ZP_07553752.1| putative foldase protein PrsA [Enterococcus faecalis TX0855] gi|307277028|ref|ZP_07558134.1| putative foldase protein PrsA [Enterococcus faecalis TX2134] gi|307284552|ref|ZP_07564714.1| putative foldase protein PrsA [Enterococcus faecalis TX0860] gi|312904295|ref|ZP_07763457.1| putative foldase protein PrsA [Enterococcus faecalis TX0635] gi|312953070|ref|ZP_07771920.1| putative foldase protein PrsA [Enterococcus faecalis TX0102] gi|229306263|gb|EEN72259.1| peptidylprolyl isomerase [Enterococcus faecalis ATCC 29200] gi|255962163|gb|EET94639.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis T1] gi|255966641|gb|EET97263.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis T2] gi|256597100|gb|EEU16276.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis ATCC 4200] gi|256682707|gb|EEU22402.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis T3] gi|256947939|gb|EEU64571.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis DS5] gi|256954972|gb|EEU71604.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis HIP11704] gi|256997926|gb|EEU84446.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis CH188] gi|257157083|gb|EEU87043.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis ARO1/DG] gi|257162772|gb|EEU92732.1| rotamase [Enterococcus faecalis X98] gi|300848256|gb|EFK76013.1| putative foldase protein PrsA [Enterococcus faecalis TUSoD Ef11] gi|306503229|gb|EFM72483.1| putative foldase protein PrsA [Enterococcus faecalis TX0860] gi|306506272|gb|EFM75436.1| putative foldase protein PrsA [Enterococcus faecalis TX2134] gi|306510784|gb|EFM79801.1| putative foldase protein PrsA [Enterococcus faecalis TX0855] gi|306513830|gb|EFM82432.1| putative foldase protein PrsA [Enterococcus faecalis TX4248] gi|310628979|gb|EFQ12262.1| putative foldase protein PrsA [Enterococcus faecalis TX0102] gi|310632391|gb|EFQ15674.1| putative foldase protein PrsA [Enterococcus faecalis TX0635] gi|315031408|gb|EFT43340.1| putative foldase protein PrsA [Enterococcus faecalis TX0017] gi|315034487|gb|EFT46419.1| putative foldase protein PrsA [Enterococcus faecalis TX0027] gi|315144514|gb|EFT88530.1| putative foldase protein PrsA [Enterococcus faecalis TX2141] gi|315146998|gb|EFT91014.1| putative foldase protein PrsA [Enterococcus faecalis TX4244] gi|315154018|gb|EFT98034.1| putative foldase protein PrsA [Enterococcus faecalis TX0031] gi|315156661|gb|EFU00678.1| putative foldase protein PrsA [Enterococcus faecalis TX0043] gi|315159697|gb|EFU03714.1| putative foldase protein PrsA [Enterococcus faecalis TX0312] gi|315162001|gb|EFU06018.1| putative foldase protein PrsA [Enterococcus faecalis TX0645] gi|315170748|gb|EFU14765.1| putative foldase protein PrsA [Enterococcus faecalis TX1342] gi|315578736|gb|EFU90927.1| putative foldase protein PrsA [Enterococcus faecalis TX0630] gi|327534276|gb|AEA93110.1| peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis OG1RF] Length = 342 Score = 42.4 bits (97), Expect = 0.086, Method: Composition-based stats. Identities = 28/312 (8%), Positives = 74/312 (23%), Gaps = 39/312 (12%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + + S + + S+ T+ G IT D +I + Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A ++++ + +++ D ++ E + Sbjct: 54 AFSQMVIYKVFEEKYGDKVTDKD-------IQKNFDEAKEQVEAQGGKFSDALKQAGLTE 106 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + ++ + I + Sbjct: 107 KTFKKQLKQRAAYDAGLKAHLKITDEDLKTAW--------ASFHPEVEAQIIQVASEDDA 158 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKS 253 V+K E EK GK ++ ++ P + K Sbjct: 159 KAVKK------EITDGGDFTKIAKEKSTDAATKKDGGKIKFDSQATTVPAEVKEAAFKLK 212 Query: 254 QNNTTNPYVTQK------GVEYIAICDKRDLGGE-IALKAYLSAQNTPTKI--EKHEAEY 304 + P + + + G + + + TK+ + ++ Sbjct: 213 DGEVSEPIAATNMQTYQTTYYVVKMTKNKAKGNDMKPYEKEIKKIAEETKLADQTFVSKV 272 Query: 305 VKKLRSNAIIHY 316 + A + Sbjct: 273 ISDELKAANVKI 284 >gi|119476248|ref|ZP_01616599.1| hypothetical protein GP2143_07354 [marine gamma proteobacterium HTCC2143] gi|119450112|gb|EAW31347.1| hypothetical protein GP2143_07354 [marine gamma proteobacterium HTCC2143] Length = 332 Score = 42.4 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 32/259 (12%), Positives = 75/259 (28%), Gaps = 11/259 (4%) Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 Q I EL K + ++ + I + + + E F Sbjct: 62 RQSAQLIETELSKDVL----LQRALELNIHRYDNIVYQRLIRNMNFLQLADGKTDNELFE 117 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 LD + D++ + IQ + ++ N+ L + ++ N++ + Y I Sbjct: 118 QALDMRLHLDDNVIKRRLIQMMEQRLLANNPPLPPSDEAIKAEFNQRFSELRKPPLYSIE 177 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK----DCNKLEKFASKIHDVSIGKAQYL 237 + F+ ++ + + K ++ + + G + L Sbjct: 178 HIFFNQDRESEAPSIIATITEQNLDFQAAKHFSSPYLQGYKFDRQTPRQLAQNFGNSFVL 237 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPT 295 P Q++ + P + G+ Y+ + ++ L Sbjct: 238 SLKQAVPTLQSVSQPVA-QWLGPIRSAFGLHYVWLNALEPARDAQLKEVEPQLRRDLDYA 296 Query: 296 KIEKHEAEYVKKLRSNAII 314 + + LR N I Sbjct: 297 AQAQALQNAINLLRKNYDI 315 >gi|325126170|gb|ADY85500.1| PrtM precursor [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 307 Score = 42.4 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 74/301 (24%), Gaps = 35/301 (11%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTIN--GEVITDGDISKRIALLKLQKINGELEKIAVQE 79 + + + + A SS T +N G IT + + + + + Sbjct: 8 IAVLAGAAAIGLSTAACSSSSATVVNYKGGKITQDEYYEAMKDTSA-------GQSTLVS 60 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 LI+ K + + N + + S + Sbjct: 61 LIIYRTLKAQYGDKVSSKKIN----------AEYNKYKKQYGSSFSTVLSSSGLTTKSFK 110 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + T + + Sbjct: 111 QNLATNLYLVAALKDLEKPTTTQEKNWWKSYHTKTT------VQHIVVAKKSTAETVIKK 164 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--T 257 + + + + +K A K+ + L F++ + K + T Sbjct: 165 LKSGTSFATLAKKYSTETATKKKAGKMAAFDSTD------TSLSSTFKSAVWKLKEGEYT 218 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT--KIEKHEAEYVKKLRSNAIIH 315 T P T G E I + + G K+++ Q + + K+ A ++ Sbjct: 219 TTPVKTLSGYEVIKVLKTTEKGSYTKNKSFIDKQLYAKWAADSNTMTKIISKVLKKANVN 278 Query: 316 Y 316 Sbjct: 279 I 279 >gi|104774371|ref|YP_619351.1| peptidylprolyl isomerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514466|ref|YP_813372.1| peptidylprolyl isomerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423452|emb|CAI98333.1| Putative peptidylprolyl isomerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093781|gb|ABJ58934.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 303 Score = 42.4 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 74/301 (24%), Gaps = 35/301 (11%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTIN--GEVITDGDISKRIALLKLQKINGELEKIAVQE 79 + + + + A SS T +N G IT + + + + + Sbjct: 8 IAVLAGAAAIGLSTAACSSSSATVVNYKGGKITQDEYYEAMKDTSA-------GQSTLVS 60 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 LI+ K + + N + + S + Sbjct: 61 LIIYRTLKAQYGDKVSSKKIN----------AEYNKYKKQYGSSFSTVLSSSGLTTKSFK 110 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + + + T + + Sbjct: 111 QNLATNLYLVAALKDLEKPTTTQEKNWWKSYHTKTT------VQHIVVAKKSTAETVIKK 164 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--T 257 + + + + +K A K+ + L F++ + K + T Sbjct: 165 LKSGTSFATLAKKYSTETATKKKAGKMAAFDSTD------TSLSSTFKSAVWKLKEGEYT 218 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT--KIEKHEAEYVKKLRSNAIIH 315 T P T G E I + + G K+++ Q + + K+ A ++ Sbjct: 219 TTPVKTLSGYEVIKVLKTTEKGSYTKNKSFIDKQLYAKWAADSNTMTKIISKVLKKANVN 278 Query: 316 Y 316 Sbjct: 279 I 279 >gi|256852157|ref|ZP_05557543.1| protease maturation protein [Lactobacillus jensenii 27-2-CHN] gi|260661810|ref|ZP_05862721.1| protease maturation protein [Lactobacillus jensenii 115-3-CHN] gi|282933671|ref|ZP_06339030.1| foldase protein PrsA [Lactobacillus jensenii 208-1] gi|256615203|gb|EEU20394.1| protease maturation protein [Lactobacillus jensenii 27-2-CHN] gi|260547557|gb|EEX23536.1| protease maturation protein [Lactobacillus jensenii 115-3-CHN] gi|281302204|gb|EFA94447.1| foldase protein PrsA [Lactobacillus jensenii 208-1] Length = 302 Score = 42.4 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 33/274 (12%), Positives = 73/274 (26%), Gaps = 39/274 (14%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 G IT + K + + + K + +I+ KQ+ K + + Sbjct: 35 GGKITQDEYYKELK-------SSQAGKSTLANMIIYRALKQQYGKKVSQKQVDKEYNAYK 87 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + ++ SA + + + + + + K Sbjct: 88 KQYGSSFESALEQNGYTTSSFKKNIETNLLTVAALKDIKKITSKQEQKAWKS-------- 139 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKI 226 + ++ +L + +D + +K++ Sbjct: 140 ------YQPKVTVQHIL-----------VSKKSTAEDIIKQLKSGTSFATLAKKYSTDSA 182 Query: 227 HDVSIGKAQYLLESD--LHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEI 282 GK +D L F+ K + TT P TQ G E I + G Sbjct: 183 TKDKGGKLAAFDSTDTTLDSDFKTAAFKLKTGEYTTTPVKTQSGYEIIKMIKHPSKGKFS 242 Query: 283 ALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314 K + Q + + ++ + + I Sbjct: 243 DHKKEIDEQIYQSMEQDTATMQSVIRTVLKKSDI 276 >gi|145608650|ref|XP_001408826.1| hypothetical protein MGG_12826 [Magnaporthe oryzae 70-15] gi|145016097|gb|EDK00587.1| hypothetical protein MGG_12826 [Magnaporthe oryzae 70-15] Length = 126 Score = 42.4 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 27/85 (31%), Gaps = 6/85 (7%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + ++A + K +++ G + + L +F+ + + + Sbjct: 43 EKHSKKEEALQKIRDGAKFDEVAREYSED-KGRQGGALGWKAKGTLKAEFEAVAYTLEPS 101 Query: 257 TT-----NPYVTQKGVEYIAICDKR 276 TT T G I + ++ Sbjct: 102 TTSNPKIGEAKTGFGYHIIMVEGRK 126 >gi|219111311|ref|XP_002177407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411942|gb|EEC51870.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 195 Score = 42.4 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 22/83 (26%), Gaps = 4/83 (4%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDL---HPQFQNLLKK 252 + R + E+ + +KF+ + G L+ Q Sbjct: 54 KQKIRNRVNEDGVYVIDAFEAAAKKFSRDETTNFRGGLIGELVPQGYCRSVELDQACFSV 113 Query: 253 SQNNTTNPYVTQKGVEYIAICDK 275 P + G I + ++ Sbjct: 114 RLGEIEGPLESDYGFHLILVSER 136 >gi|291515888|emb|CBK65098.1| PPIC-type PPIASE domain [Alistipes shahii WAL 8301] Length = 676 Score = 42.4 bits (97), Expect = 0.092, Method: Composition-based stats. Identities = 29/306 (9%), Positives = 70/306 (22%), Gaps = 16/306 (5%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + T + ++ + ++ I+ + + ++ + I+GE I + + Sbjct: 4 LNTLRTKFGIVLSIIIA--LALLAFILSLKTEMGFSGNDPRVGVIDGEKINYSEYYDQYE 61 Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 +K Q E ++ L + + GL + Sbjct: 62 TIKSQNNMQESDEQQSAMLANAAWQALI------------AKHVLTPGFDRMGLRVTEPE 109 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 G + + E A + Sbjct: 110 RLAMVSGQHPSQAFYNAFADPRTGEYSVAAISQFLAQAETNPEAANAWAQLNEQARLERE 169 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKIHDVSIGKAQYLLES 240 + ++ ++ K K + VS G + S Sbjct: 170 VQKYFGLVKGGVYVNSLEVARGVEAANKSFSGKWAGKKFSAVPDSLVKVSSGDVKAYYNS 229 Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300 + Q + T + + ++G E A + + K Sbjct: 230 HKNQFKQTPSRTISYVVFEVSPTDDDLLALE-KSVTEVGREFAAAEEVKTFVRANRNGKI 288 Query: 301 EAEYVK 306 YV Sbjct: 289 ADSYVS 294 >gi|254411881|ref|ZP_05025657.1| PPIC-type PPIASE domain protein [Microcoleus chthonoplastes PCC 7420] gi|196181603|gb|EDX76591.1| PPIC-type PPIASE domain protein [Microcoleus chthonoplastes PCC 7420] Length = 245 Score = 42.4 bits (97), Expect = 0.092, Method: Composition-based stats. Identities = 21/237 (8%), Positives = 68/237 (28%), Gaps = 19/237 (8%) Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFLDK 126 K ++ + + ++ ++ GI + + + L D ++L Sbjct: 18 KQDIQYKKVCHQIWSQRVIERATQERGIVVTPEEIQAEADKQRQAMHLEKAADTLAWLAD 77 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 Q I + ++ + ++ + + F E+ + + + L + +L Sbjct: 78 QRITPDDWEAGIRLRLLTQKLADCLFGN-------EVEKFFTQNRLDYEQILLYQLIL-- 128 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 ++ ++ + EE + + + + + G + L P+ Sbjct: 129 ------ASEPLARELFYEIEEGEISFYEAAHLYDIDPERKRRC--GYEGKVYRWRLKPEM 180 Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 + + + P T G + + + + +E Sbjct: 181 ASAVFAAPIGEVVGPIKTDLGYHLLRAEEFIPAQLTPERSQEILNRLFGQWLESEVN 237 >gi|29375282|ref|NP_814435.1| rotamase family protein [Enterococcus faecalis V583] gi|257077560|ref|ZP_05571921.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis JH1] gi|257086046|ref|ZP_05580407.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis D6] gi|294780469|ref|ZP_06745834.1| putative foldase protein PrsA [Enterococcus faecalis PC1.1] gi|46396846|sp|Q837Y9|PRSA_ENTFA RecName: Full=Foldase protein prsA; Flags: Precursor gi|29342742|gb|AAO80506.1| rotamase family protein [Enterococcus faecalis V583] gi|256985590|gb|EEU72892.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis JH1] gi|256994076|gb|EEU81378.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis D6] gi|294452468|gb|EFG20905.1| putative foldase protein PrsA [Enterococcus faecalis PC1.1] gi|315025711|gb|EFT37643.1| putative foldase protein PrsA [Enterococcus faecalis TX2137] Length = 342 Score = 42.4 bits (97), Expect = 0.093, Method: Composition-based stats. Identities = 28/312 (8%), Positives = 74/312 (23%), Gaps = 39/312 (12%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + + S + + S+ T+ G IT D +I + Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A ++++ + +++ D ++ E + Sbjct: 54 AFSQMVIYKVFEEKYGDKVTDKD-------IQKNFDEAKEQVEAQGGKFSDALKQAGLTE 106 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + ++ + I + Sbjct: 107 KTFKKQLKQRAAYDAGLKAHLKITDEDLKTAW--------ASFHPEVEAQIIQVASEDDA 158 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKS 253 V+K E EK GK ++ ++ P + K Sbjct: 159 KAVKK------EITDGGDFTKIAKEKSTDTATKKDGGKIKFDSQATTVPAEVKEAAFKLK 212 Query: 254 QNNTTNPYVTQK------GVEYIAICDKRDLGGE-IALKAYLSAQNTPTKI--EKHEAEY 304 + P + + + G + + + TK+ + ++ Sbjct: 213 DGEVSEPIAATNMQTYQTTYYVVKMTKNKAKGNDMKPYEKEIKKIAEETKLADQTFVSKV 272 Query: 305 VKKLRSNAIIHY 316 + A + Sbjct: 273 ISDELKAANVKI 284 >gi|256419787|ref|YP_003120440.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chitinophaga pinensis DSM 2588] gi|256034695|gb|ACU58239.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chitinophaga pinensis DSM 2588] Length = 702 Score = 42.4 bits (97), Expect = 0.094, Method: Composition-based stats. Identities = 26/256 (10%), Positives = 64/256 (25%), Gaps = 9/256 (3%) Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETL 85 + VS +++ ++D +++ I K E K V L + Sbjct: 205 ASISYVSVPYASIADSTV------KVSDSELNSFINSHKELFKVEESRK--VDYLAFNVI 256 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + + + + S ++ Sbjct: 257 PSAADTAATLKVLMDAKQELDTISNNDIAAFINRNSDLPYYDSYISKSALMVPQKDTLVT 316 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 V F Y N + + + V + RI Sbjct: 317 LPVGAVFGPYYDNNLIVYAKMIDRKTLPDSVKVRHILVATQNQQGGGLPDSLAKARIDSI 376 Query: 206 EESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQ 264 E + +E++ + + G+ +D +F++ + T Sbjct: 377 ERAVKGGADFKALVEQYTDDVRSKPTGGEYDVTPSTDFLKEFKDFALEKGKGAIGVVKTA 436 Query: 265 KGVEYIAICDKRDLGG 280 G I + +++++G Sbjct: 437 AGYHLIEVLEQKNIGS 452 >gi|308812929|ref|XP_003083771.1| Chain A, Solution Structure Of Pin1at From Arabidopsis Thaliana (ISS) [Ostreococcus tauri] gi|116055653|emb|CAL57738.1| Chain A, Solution Structure Of Pin1at From Arabidopsis Thaliana (ISS) [Ostreococcus tauri] Length = 228 Score = 42.4 bits (97), Expect = 0.094, Method: Composition-based stats. Identities = 7/51 (13%), Positives = 14/51 (27%), Gaps = 1/51 (1%) Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 A + + G + F++ + + T GV I Sbjct: 174 DDARRFDNQRGGDLGEFGRGQMQKPFEDATFALAVGEMSGVVDTDSGVHVI 224 >gi|322380902|ref|ZP_08054980.1| peptidylprolyl isomerase [Helicobacter suis HS5] gi|321146670|gb|EFX41492.1| peptidylprolyl isomerase [Helicobacter suis HS5] Length = 481 Score = 42.4 bits (97), Expect = 0.096, Method: Composition-based stats. Identities = 36/377 (9%), Positives = 86/377 (22%), Gaps = 70/377 (18%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M S + + + + + + S++M++ + +I++ ++ + Sbjct: 1 MISWMQKHKKYLVVTIWISTIAFVAAGMIGWGQYSFSMANGNVAKVGRVLISEEELDREH 60 Query: 61 ALLKLQKINGE---------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 L LE A+ LI + L K G+ + V Sbjct: 61 RRLLDIYSQSIPNFKDLSEKEVKALGLEHNALTLLINQALLKNLALDLGLGVSGSEVIAE 120 Query: 106 FVQH--ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + +N G E + ++ + ++ + F LE E Sbjct: 121 IQKSTAFQNEGHFDEALYKKILQENRYRPSAFEEGIKNALLLQKISALFPQAITPLEEEA 180 Query: 164 PAN------------------------------KQKMKNITVREYLIRTVLFSIPDNKLQ 193 + K Y + + D + Sbjct: 181 FLWPLRLQDQVRIEVLEPKEVVVTQQALRDYYNQHKNTYKKPPSYTLAASHITDTDIEPA 240 Query: 194 NQGFVQKRIKDAEE---SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-------- 242 Q +Q + ++ + ++ K + L Sbjct: 241 KQEQLQAYYEKNKQVYTLQGKVQDFMQVKIKVSHDYLQEKARDLALQKYLALKNNTFKPA 300 Query: 243 ----------HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSA 290 + P + G + + K+ L K + Sbjct: 301 TEVITKLPYPAEIATKIETMHPGEVLKPQKYKDGWLVVKLVSKQTDQLQSFEEAKEEVRI 360 Query: 291 QNTPTKIEKHEAEYVKK 307 + K + K Sbjct: 361 AVVEQEQRKWLKQEASK 377 >gi|260426113|ref|ZP_05780092.1| conserved hypothetical protein [Citreicella sp. SE45] gi|260420605|gb|EEX13856.1| conserved hypothetical protein [Citreicella sp. SE45] Length = 282 Score = 42.4 bits (97), Expect = 0.096, Method: Composition-based stats. Identities = 8/64 (12%), Positives = 21/64 (32%), Gaps = 2/64 (3%) Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 + T P + G + + + ++ + A +++ + + LRS Sbjct: 208 PEGQWTGPVESGYGRHLVRLDAMQPGYLPPLEVVRDRVLADWRAQEMKVAREAFTEALRS 267 Query: 311 NAII 314 I Sbjct: 268 RYRI 271 >gi|257894185|ref|ZP_05673838.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,231,408] gi|257830564|gb|EEV57171.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,231,408] Length = 340 Score = 42.4 bits (97), Expect = 0.097, Method: Composition-based stats. Identities = 33/320 (10%), Positives = 86/320 (26%), Gaps = 45/320 (14%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + +K T V ++ S +++ T+ G IT D L Sbjct: 1 MQILMKKNTIILAATSALAVLTLAACS-GDTNKDIATMKGGTITVSDFYDEAKL------ 53 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + VQ +I+ + K G V+ + + A++ G + E Q Sbjct: 54 -ESSNQSLVQRMIIYKV---FNNKYGDKVTDKQVDAEYDKQAKSLGDTFES-------QL 102 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + K + + ++ + + ++ Sbjct: 103 EAAGYTKDTYKEYIRNNLAFEAGLKAHVDITDDDLKTAW-----KSFHPEVEAQIIKLSS 157 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF- 246 +++ ++ + ++ GK ++ + P Sbjct: 158 EDEAKDVKKSA----------DDGDDFSKLAKDKSTDTETKEDGGKVKFDSTTTTIPAEV 207 Query: 247 -QNLLKKSQNNTTNPYVTQK------GVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKI- 297 + K ++ T + + ++ G ++ K L T TK+ Sbjct: 208 KEAAFKLKDGEISDVITTTNPTSYATEYYVVKMVKNQNKGNDMDKYKDQLKDIATETKLS 267 Query: 298 -EKHEAEYVKKLRSNAIIHY 316 + + + +A + Sbjct: 268 DNAFTTKVIGEELKDANVKI 287 >gi|332665327|ref|YP_004448115.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliscomenobacter hydrossis DSM 1100] gi|332334141|gb|AEE51242.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliscomenobacter hydrossis DSM 1100] Length = 702 Score = 42.4 bits (97), Expect = 0.097, Method: Composition-based stats. Identities = 23/266 (8%), Positives = 64/266 (24%), Gaps = 16/266 (6%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 ++ ++ D LK + ++ A + I + + K+ N + Sbjct: 210 VDNAEVSVSD-EDYANYLKENPGLFKYDEEARK--IGLVTFEVKPTKADSLAQRNKIVGL 266 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + + + G SI+ + F E Sbjct: 267 INDWRQAPNDTVFVEQNLGTIDGAYVKREGLLQFADSIFNLPIGGIFGPYV---EGNAYR 323 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + + + + + PD + + +F Sbjct: 324 AVKLLDRKVIPDSVKSRHILIRPDAVTPLAVIKTRLDSIKNVIETGKATFADMALRFGQD 383 Query: 226 IHDVSIGKAQYLLESDLHPQFQN--LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 + G Y + + + + Q TQ G + + K+ Sbjct: 384 GTSTTGGDLGYTALGGMVKPYNDLIFFQAEQGKLYT-VETQFGAHLVEVTGKKVTSNASG 442 Query: 284 LK-----AYLS--AQNTPTKIEKHEA 302 ++ + + + E+ + Sbjct: 443 VRVAYIGEVIKPSKETENRRFEEAQR 468 >gi|167519250|ref|XP_001743965.1| hypothetical protein [Monosiga brevicollis MX1] gi|163777927|gb|EDQ91543.1| predicted protein [Monosiga brevicollis MX1] Length = 111 Score = 42.4 bits (97), Expect = 0.099, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 17/80 (21%), Gaps = 1/80 (1%) Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH-PQFQNLLK 251 + K E+ K + G ++ P F + Sbjct: 29 SKVQATEMLTKFREQIVSGEKKFEEIAAVESDCGSAAQGGDIGTFTAEEIQKPFFDAVAG 88 Query: 252 KSQNNTTNPYVTQKGVEYIA 271 N + T G I Sbjct: 89 LEVNEISQVVHTDSGSHIIQ 108 >gi|322378577|ref|ZP_08053017.1| conserved hypothetical secreted protein [Helicobacter suis HS1] gi|321148985|gb|EFX43445.1| conserved hypothetical secreted protein [Helicobacter suis HS1] Length = 481 Score = 42.4 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 36/377 (9%), Positives = 86/377 (22%), Gaps = 70/377 (18%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M S + + + + + + S++M++ + +I++ ++ + Sbjct: 1 MISWMQKHKKYLVVTIWISTIAFVAAGMIGWGQYSFSMANGNVAKVGRVLISEEELDREH 60 Query: 61 ALLKLQKINGE---------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 L LE A+ LI + L K G+ + V Sbjct: 61 RRLLDIYSQSIPNFKDLSEKEVKALGLEHNALTLLINQALLKNLALDLGLGVSGSEVIAE 120 Query: 106 FVQH--ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + +N G E + ++ + ++ + F LE E Sbjct: 121 IQKSTAFQNEGHFDEALYKKILQENRYRPSAFEEGIKNALLLQKISALFPQAITPLEEEA 180 Query: 164 PAN------------------------------KQKMKNITVREYLIRTVLFSIPDNKLQ 193 + K Y + + D + Sbjct: 181 FLWPLRLQDQVRIEVLEPKEVVVTQQALRDYYNQHKNTYKKPPSYTLAASHITDTDIEPA 240 Query: 194 NQGFVQKRIKDAEE---SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-------- 242 Q +Q + ++ + ++ K + L Sbjct: 241 KQEQLQAYYEKNKQVYTLQGKVQDFMQVKIKVSHDYFQEKARDLALQKYLALKNNTFKPA 300 Query: 243 ----------HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSA 290 + P + G + + K+ L K + Sbjct: 301 TEVITKLPYPAEIATKIETMHPGEVLKPQKYKDGWLVVKLVSKQTDQLQSFEEAKEEVRI 360 Query: 291 QNTPTKIEKHEAEYVKK 307 + K + K Sbjct: 361 AVVEQEQRKWLKQEASK 377 >gi|197117512|ref|YP_002137939.1| hypothetical protein Gbem_1123 [Geobacter bemidjiensis Bem] gi|197086872|gb|ACH38143.1| conserved hypothetical protein [Geobacter bemidjiensis Bem] Length = 613 Score = 42.4 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 25/269 (9%), Positives = 61/269 (22%), Gaps = 38/269 (14%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++N E IT GD+ K + L + + + KK +E + V Sbjct: 97 LASVNDEKITLGDLQKALMSLHEKMTEEK----------EVSAKKNFMEPLERLINVKLV 146 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + + Q + F + + V+ ++ ++++ Sbjct: 147 VQEAKNMELDRQDEIKSNLEKFADQQLRQVLFLERVKDIKPDERKVQKEYRDTIKEMKLK 206 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + V K + + + + +K K Sbjct: 207 SLIF---------------------------KKDTVAKAFIEELKHGKKFDELRDKALKD 239 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 + + L + G + + R + Sbjct: 240 GKAETAGQDEQQYATNAALGPVVSAGLADVKAGGISPIIEIMNGFLVAKVEEIRYV-DNP 298 Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 A ++ Y +L Sbjct: 299 AGLEQARSKVLSQMKLDSLKAYKAELVKK 327 Score = 41.6 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 22/191 (11%), Positives = 55/191 (28%), Gaps = 8/191 (4%) Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + ++ ++ EI +K + + + Sbjct: 424 EYLKRIEDHKTTVLFGAFIEKVIKPDVTFTVAEIKDYYEKHISEYAAPEKM-QIQGIAFT 482 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 K Q + K + + + LR D + A + + + Q + Sbjct: 483 KKDDAQKAIDKLREGVDFAWLRNNADGQVAKN-ARDLLQFNEEAL---TLQSMPEPMQKV 538 Query: 250 LKKSQNNTTNPYVTQKGV-EYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVK 306 LK + Y + +G + + +K + +K + + + + ++ K Sbjct: 539 LKDAHKGDYRLYESPEGYSYALFVKEKEEAKARPLEEVKDEVGQKVAWLNLTQDIEKWFK 598 Query: 307 KLRSNAIIHYY 317 KLR + Y Sbjct: 599 KLREAYPVKIY 609 >gi|152988040|ref|YP_001345424.1| putative lipoprotein [Pseudomonas aeruginosa PA7] gi|150963198|gb|ABR85223.1| lipoprotein, putative [Pseudomonas aeruginosa PA7] Length = 428 Score = 42.4 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 16/171 (9%), Positives = 48/171 (28%), Gaps = 14/171 (8%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 K + + E + + V + + + + + +QK + E R Sbjct: 265 RQLAAKVSDQDAEAYYRRNLERYRNVAQVQAVHIRLADQASADRVYAELQKGLAFDEAVR 324 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLE--SDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 A G + L + L + + + P Sbjct: 325 RH---------SLADDRDRDPPGDLGLIRPQDGQLDLLRKTALIQKADTLSQPMRIDGAF 375 Query: 268 EYIAI---CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 E + + D++ + +++ ++ ++ ++ L + A + Sbjct: 376 EIVRVRSREDRQLPLSDRSVRFEVNQAVARERLAAQFETQLRGLLAGARVE 426 >gi|167525727|ref|XP_001747198.1| hypothetical protein [Monosiga brevicollis MX1] gi|163774493|gb|EDQ88122.1| predicted protein [Monosiga brevicollis MX1] Length = 198 Score = 42.4 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 9/119 (7%), Positives = 22/119 (18%), Gaps = 24/119 (20%) Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 + R + + + + IK E+ + E + G Sbjct: 76 KHRDSRRPSSWRQNTITRTKAEAIEIIKRHREAIAQGADFAKIAETESDCSSAKRGGDLG 135 Query: 236 YLLESDL------------------------HPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 + + ++ T G+ I Sbjct: 136 AFGRGQMQTTDVMTPGSHTTCLASPCFPANAEAFEKAAFALKVGELSDLVDTDSGIHII 194 >gi|71650018|ref|XP_813716.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70878626|gb|EAN91865.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 421 Score = 42.0 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 9/77 (11%), Positives = 20/77 (25%), Gaps = 1/77 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254 + + S L + + +++ G + +F Sbjct: 342 AEAIRARHGDQTSVWSLDEFTAVVREYSECGSAKRDGDLGMVESGTYTEKFGAAAFSLGC 401 Query: 255 NNTTNPYVTQKGVEYIA 271 + P T+ GV I Sbjct: 402 GMVSAPVETELGVHLIY 418 >gi|85709482|ref|ZP_01040547.1| hypothetical protein NAP1_11393 [Erythrobacter sp. NAP1] gi|85688192|gb|EAQ28196.1| hypothetical protein NAP1_11393 [Erythrobacter sp. NAP1] Length = 262 Score = 42.0 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 7/65 (10%), Positives = 19/65 (29%), Gaps = 1/65 (1%) Query: 253 SQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ P + G + + + A++ + + + + LRS Sbjct: 196 PRDEWQGPVPSGFGWHLVRLTQRTAKDPSFDAVREEVENDWRSAETAARKDRAFEVLRSA 255 Query: 312 AIIHY 316 I Sbjct: 256 YRIEI 260 >gi|134302065|ref|YP_001122034.1| hypothetical protein FTW_1101 [Francisella tularensis subsp. tularensis WY96-3418] gi|134049842|gb|ABO46913.1| hypothetical protein FTW_1101 [Francisella tularensis subsp. tularensis WY96-3418] Length = 476 Score = 42.0 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 13/161 (8%), Positives = 40/161 (24%), Gaps = 6/161 (3%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M L + + IF I + + + S + I+ + Sbjct: 1 MLQSFNDRLKGPFTWIVVISISFIFVISGMTFFFTNIGSRAYVAKVGDNEISSQQFQQYA 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 E ++ + ++I + L + ++ I + + + Sbjct: 61 Q----SATTEEQKRAILSQMIDQYLILADAQRHDIVVSKLALQSAIFTNPMFF--DKDGK 114 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 S + + Q + ++ + + Sbjct: 115 FSAEKLKQVVAYLGGMDKLEQILAQNIQATIIPKTIVDTSI 155 >gi|293115632|ref|ZP_05792424.2| putative PPIC-type PPIASE domain protein [Butyrivibrio crossotus DSM 2876] gi|292809199|gb|EFF68404.1| putative PPIC-type PPIASE domain protein [Butyrivibrio crossotus DSM 2876] Length = 327 Score = 42.0 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 30/312 (9%), Positives = 77/312 (24%), Gaps = 21/312 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD---ISKRIAL 62 F L I L +L+I + I+ + Sbjct: 4 FYMLKHKIAGLLAVLILLISATGCTNIRFTTGTGKNRFAVCGNYSISVQAADILISERKY 63 Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 N E+ +V ++ +E +I+ + + E+ Sbjct: 64 SYEDLFNNEIWNRSVGDMTMEEYLLSDIKTLAGNV---IYLNMMAEDMQINLTGDEEERI 120 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + ++ ++ + ++ + +++I T I Sbjct: 121 SEYAEDYAEDSGFDKADVEELLQMLLIAEKSFYAMTEDVDIE-------VSTDEARTISV 173 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 N + + +A + E+ + SI ++ Sbjct: 174 QYMFFAVNDDVTDRMAENKASEALQKIEDGTDFLTLAEEQSDD----SIHSMEFYKGIYD 229 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 K ++ T+ G I + K+ + + + E+ A Sbjct: 230 KDFETAAYKLETGQVSSVVETKYGYYIIKCINDNIESDTAKRKSEIVLK----RREELFA 285 Query: 303 EYVKKLRSNAII 314 + ++L I Sbjct: 286 DKFRQLAEKKDI 297 >gi|323138293|ref|ZP_08073365.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylocystis sp. ATCC 49242] gi|322396545|gb|EFX99074.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylocystis sp. ATCC 49242] Length = 635 Score = 42.0 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 28/334 (8%), Positives = 83/334 (24%), Gaps = 54/334 (16%) Query: 1 MTSKVFTSLSDFIKLLTTYF----VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI 56 M + + ++I +++ F I + +SR+ + ++ Sbjct: 1 MLEGLRVASQNWIGRTIMAVVMGVIVVSFAIWGVGDVFRGMTTSRLV-KVGSGEVSVDSF 59 Query: 57 SKRIAL-------------LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + L+ ++ LI E Q+ + G+ T Sbjct: 60 RNAYQNELRRIQQRLRRAVTNQEARQAGLDLQVLERLITEVALDQKARQLGLASSDETTQ 119 Query: 104 YFFVQHARNTGLSAE---DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + G + + + + + ++ + Sbjct: 120 QLLAKEKVLQGPDGKFDVERFKQIARDAGFTERGFVADQKSAYLRKLLTDLVTNGVEPPR 179 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 + I A + +N + + + + ++K + E++ Sbjct: 180 LMIEA-IHRFRNESRTIDYFVLPVSAAGPASTPSDEELKKYFDEREQTFRAKEYRKLTAL 238 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 + S+GK + E ++ ++ + Sbjct: 239 VVSPT----SVGKPGEVTEDEVRKLYEESKARRFG------------------------- 269 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 K + K +K + + +L+ I Sbjct: 270 -TPEKRDVRQIVL--KTDKEAEDALARLKGGMDI 300 >gi|329576836|gb|EGG58321.1| PPIC-type PPIASE domain protein [Enterococcus faecalis TX1467] Length = 342 Score = 42.0 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 28/312 (8%), Positives = 73/312 (23%), Gaps = 39/312 (12%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + + S + + S+ T+ G IT D +I + Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A ++++ + +++ D ++ E + Sbjct: 54 AFSQMVIYKVFEEKYGDKVTDKD-------IQKNFDEAKEQVEAQGGKFSDALKQAGLTE 106 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + ++ + I + Sbjct: 107 KTFKKQLKQRAAYDAGLKAHLKITDEDLKTAW--------ASFHPEVEAQIIQVASEDDA 158 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKS 253 V+K E EK GK ++ + P + K Sbjct: 159 KAVKK------EITDGGDFTKIAKEKSTDAATKKDGGKIKFDSHAATVPAEVKEAAFKLK 212 Query: 254 QNNTTNPYVTQK------GVEYIAICDKRDLGGE-IALKAYLSAQNTPTKI--EKHEAEY 304 + P + + + G + + + TK+ + ++ Sbjct: 213 DGEVSEPIAATNMQTYQTTYYVVKMTKNKAKGNDMKPYEKEIKKIAEETKLADQTFVSKV 272 Query: 305 VKKLRSNAIIHY 316 + A + Sbjct: 273 ISDELKAANVKI 284 >gi|258509270|ref|YP_003172021.1| peptidylprolyl isomerase [Lactobacillus rhamnosus GG] gi|257149197|emb|CAR88170.1| Endopeptidase maturation protein prtM [Lactobacillus rhamnosus GG] gi|259650551|dbj|BAI42713.1| peptidylprolyl isomerase [Lactobacillus rhamnosus GG] Length = 300 Score = 42.0 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 38/288 (13%) Query: 14 KLLTTYFVLIIFC--IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 K L F+ + I+ + +S S T +G +T K + Sbjct: 3 KKLRVPFLAAMMASSIMLLSGCQSKQADSTTVATYSGGQVTQASFYKELK-------QSP 55 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 K + L++ + KS T + E+F+SFL + G Sbjct: 56 TTKTVLANLLIYRALNKAYGKSVSTKSVDNTYN------SYKNEYGENFTSFLSQNGFSK 109 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + F+Q + + +K K N +++ + ++ +L S Sbjct: 110 SSFRQSIRTNLLSEVALKKL--KKVTNSQLKTAWKTY------QPKVTVQHILTSDESTA 161 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLES-DLHPQFQNL 249 Q + + ++ GK + S L F++ Sbjct: 162 KQVISDLAA-----------GKDFTTLAKTYSIDTSTKDKGGKVSFESSSKSLDSTFKDA 210 Query: 250 LKK-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 K T P G E I + + G K L+A Sbjct: 211 AYKLKNGEYTQSPVKVTNGYEVIKMIEHPAKGTFSDSKKALTASVYSK 258 >gi|315452770|ref|YP_004073040.1| peptidyl-prolyl cis-trans isomerase D [Helicobacter felis ATCC 49179] gi|315131822|emb|CBY82450.1| peptidyl-prolyl cis-trans isomerase D [Helicobacter felis ATCC 49179] Length = 482 Score = 42.0 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 43/386 (11%), Positives = 107/386 (27%), Gaps = 76/386 (19%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 K L I + T F+ S+ + S + +IT ++ Sbjct: 1 MQKHKKYLVVTIWISTIAFIAAGMIGWGQYSFSMASGS---VAKVGRVLITSEELEMERK 57 Query: 62 LL---------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 L + Q LEK A++ LI + K G+ + Sbjct: 58 RLVDAYSQSIPNFKDLDEKQIAAMGLEKTALRMLINQAYLKNLALDLGLGVSDAEIATEI 117 Query: 107 VQHA---RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV---------------- 147 + A ++ + + L F++ + I V Sbjct: 118 QKSALFQKDGHFDVDLYKKVLQDNHYRPALFEENVKNALILQKVSGLFPSATTPLEKEAF 177 Query: 148 -----VKNDFMLKY----------GNLEMEIPANKQKMKNITVREYL------------- 179 +++ +K ++ ++ K Y Sbjct: 178 TYPLKIQDRISIKILEASHAPIQLEESALKAYYDQHKNTYKKPTRYTLQTLWIKPKTATL 237 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA---SKIHDVSIGKAQY 236 +++L ++ N Q +++ E+++ R+ D N+ + + + G Sbjct: 238 DQSILRKYYQDRKSNYTDAQGKLETFEKAKDRVIHDYNQAQAKENALKQYLALKRGNLNP 297 Query: 237 LLESDLHPQFQNLLKKS-----QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 ES + + P ++G + + +K G + ++ Sbjct: 298 KKESFTDLPYGTDIDTKIIAMQPGEVLKPLEYKEGYLVVKLVEK--SSGLLKSFQEAKSE 355 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHYY 317 T + + +++K+ + + Sbjct: 356 IMATLQAEAQQKWLKQEAQK-QVKNF 380 >gi|312900280|ref|ZP_07759592.1| putative foldase protein PrsA [Enterococcus faecalis TX0470] gi|311292641|gb|EFQ71197.1| putative foldase protein PrsA [Enterococcus faecalis TX0470] Length = 342 Score = 42.0 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 28/312 (8%), Positives = 73/312 (23%), Gaps = 39/312 (12%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + + S + + S+ T+ G IT D +I + Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A ++++ + +++ D + E + Sbjct: 54 AFSQMVIFKVFEEKYGDKVTDKD-------IQKSFDEAKEQVEAQGGKFSDALKQAGLTE 106 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + ++ + I + Sbjct: 107 KAFKKQLKQRAAYDAGLKAHLKITDEDLKTAW--------ASFHPEVEAQIIQVASEDDA 158 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKS 253 V+K E EK GK ++ ++ P + K Sbjct: 159 KAVKK------EITDGGDFTKIAKEKSTDAATKKDGGKIKFDSQATTVPAEVKEAAFKLK 212 Query: 254 QNNTTNPYVTQK------GVEYIAICDKRDLGGE-IALKAYLSAQNTPTKI--EKHEAEY 304 + P + + + G + + + TK+ + ++ Sbjct: 213 DGEVSEPIAATNMQTYQTTYYVVKMTKNKAKGNDMKPYEKEIKKIAEETKLADQTFVSKV 272 Query: 305 VKKLRSNAIIHY 316 + A + Sbjct: 273 ISDELKAANVKI 284 >gi|307310586|ref|ZP_07590233.1| putative peptidyl-prolyl cis-trans isomerase protein [Sinorhizobium meliloti BL225C] gi|307320968|ref|ZP_07600375.1| putative peptidyl-prolyl cis-trans isomerase protein [Sinorhizobium meliloti AK83] gi|306893342|gb|EFN24121.1| putative peptidyl-prolyl cis-trans isomerase protein [Sinorhizobium meliloti AK83] gi|306899696|gb|EFN30322.1| putative peptidyl-prolyl cis-trans isomerase protein [Sinorhizobium meliloti BL225C] Length = 630 Score = 42.0 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 26/80 (32%), Gaps = 5/80 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56 M + + + +++ F + + + + T+ ++ D Sbjct: 1 MLDSLRNAAQTRVVKGLLALLILSFMVWGGQTLMVPNTPNAVV-TVGDVKVSASDFRLAY 59 Query: 57 SKRIALLKLQKINGELEKIA 76 +++ALL Q + A Sbjct: 60 ERQVALLSRQLGTPLSRQQA 79 >gi|15965412|ref|NP_385765.1| putative peptidyl-prolyl cis-trans isomerase protein [Sinorhizobium meliloti 1021] gi|15074593|emb|CAC46238.1| Putative peptidyl-prolyl cis-trans isomerase [Sinorhizobium meliloti 1021] Length = 630 Score = 42.0 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 26/80 (32%), Gaps = 5/80 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56 M + + + +++ F + + + + T+ ++ D Sbjct: 1 MLDSLRNAAQTRVVKGLLALLILSFMVWGGQTLMVPNTPNAVV-TVGDVKVSASDFRLAY 59 Query: 57 SKRIALLKLQKINGELEKIA 76 +++ALL Q + A Sbjct: 60 ERQVALLSRQLGTPLSRQQA 79 >gi|71419036|ref|XP_811046.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70875666|gb|EAN89195.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 422 Score = 42.0 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 9/77 (11%), Positives = 20/77 (25%), Gaps = 1/77 (1%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254 + + S L + + +++ G + +F Sbjct: 343 AEAIRARHGDQTSVWSLDEFTAVVREYSECGSAKRDGDLGMVESGTYTDKFDAAAFSLGC 402 Query: 255 NNTTNPYVTQKGVEYIA 271 + P T+ GV I Sbjct: 403 GMVSAPVETELGVHLIY 419 >gi|294782675|ref|ZP_06748001.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. 1_1_41FAA] gi|294481316|gb|EFG29091.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. 1_1_41FAA] Length = 563 Score = 42.0 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 65/233 (27%), Gaps = 8/233 (3%) Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + + + A+N + ++G+ N ++ + Sbjct: 236 LDLAKIMATFMINQKATKEQAEELAKNMLAKQIKVAKMAKEKGVKVNEELDLMSQLQEYT 295 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + + + E+ + K+ L I + V K + Sbjct: 296 VGLSEKLREEIKPTDAELESFFNANKSRYNIPETADAKLIFITVKSTKEDDAVAKAEAEK 355 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVT 263 + L K + + + + + +F+ LK +N T Sbjct: 356 LLAELTPENFSEKGKSIGNNQDIIY-QDLGTFGKQAMVKEFEEALKDVPSNTVINKVIKT 414 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS-NAIIH 315 + G + + K++ + ++ P EK E ++KL A I Sbjct: 415 KFGYHVVYV--KKNDNNQQWSAEHILIVPYP--SEKTVEEKLEKLNKLKADIE 463 >gi|302657689|ref|XP_003020561.1| hypothetical protein TRV_05348 [Trichophyton verrucosum HKI 0517] gi|291184406|gb|EFE39943.1| hypothetical protein TRV_05348 [Trichophyton verrucosum HKI 0517] Length = 205 Score = 42.0 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 7/121 (5%), Positives = 24/121 (19%), Gaps = 13/121 (10%) Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + + R + + ++ + + + + Sbjct: 67 EGKIRASHLLIKHRESRRPSSWRESEITRSKDEAIEILRNHKQRIQSGEASLGDIATSES 126 Query: 224 SKIHDVSIGKA------------QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270 G + ++ +F+ ++ T GV I Sbjct: 127 DCSSARKRGDLQHKAWVTDKSYSGFFGRGEMQAEFEQAAFALKVGEVSDIVETASGVHLI 186 Query: 271 A 271 Sbjct: 187 E 187 >gi|313904444|ref|ZP_07837821.1| hypothetical protein EubceDRAFT_0536 [Eubacterium cellulosolvens 6] gi|313470780|gb|EFR66105.1| hypothetical protein EubceDRAFT_0536 [Eubacterium cellulosolvens 6] Length = 376 Score = 42.0 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 30/334 (8%), Positives = 79/334 (23%), Gaps = 36/334 (10%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT--TINGEVI-------------------- 51 K+ ++ C + + + + +NGE I Sbjct: 3 KVKAKAVTAVLACTMAMTTLAGCGKVDGTQAALIVNGETINLGTAEFYLRYQQAQSTAMM 62 Query: 52 ------TDGDISKRIALLKLQKINGELEKIAVQEL---IVETLKKQEIEKSGITFDSNTV 102 T+ ++ + + + + IV+ + + + S+ + Sbjct: 63 ANYGMSTESVWAQEYSGATSTSESKTYGDSLKESIRKNIVQGVILKSHAEEYDVTISDNL 122 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + A+ T + ++ + + Q + + D + E Sbjct: 123 KEEIKKAAKETYETNKEAMDKIGTTEGDIETVLELSTYQRLMYYPMAKDVDTNVSDEEAA 182 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++T + D K + ++ ++ + S D L Sbjct: 183 ESTITYAKISLTKNDSETGGSETMTDDEKKAAKKLLEDLLEKVKTSSDPAKADVKSLASQ 242 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGE 281 +VS ++ T + + D + Sbjct: 243 LDDSIEVSEQSFTKDSQALPEAVLSEATALKDGELHDGIIETDDAYYIVRM----DKVLD 298 Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + E + V+K A I Sbjct: 299 REATDSNKKTIIEQRRETAYNDLVEKWYKEAKIK 332 >gi|186683552|ref|YP_001866748.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nostoc punctiforme PCC 73102] gi|186466004|gb|ACC81805.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nostoc punctiforme PCC 73102] Length = 242 Score = 42.0 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 74/254 (29%), Gaps = 24/254 (9%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 IT+ DI ++ L V+++I L E++GI + + Q Sbjct: 7 ITNEDILHQVKLSCKI-------PEIVEQIITRKLIIAAAEEAGIKVEVEELQKAADQIR 59 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 L + D + Q + + + + +++ ++ + Sbjct: 60 LVNKLDSADRTW----QWLEKHSLSLDDFEEIAYLNLISGKLTNHL--FADKVEPYFIEN 113 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 + V + VL ++ + +E + +K + Sbjct: 114 QLDYVGVVMYEVVL--------DDEDLALELFYAIKEGEMSFYDVAHKFIQ--DTELRRK 163 Query: 231 IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 G + DL P+ + P VT KG+ I + + L+ + Sbjct: 164 GGYLGIVRRKDLKPEISAAVFSAKPPQVIKPIVTSKGIHLILVEELIQPDLNEKLRTNII 223 Query: 290 AQNTPTKIEKHEAE 303 + + A+ Sbjct: 224 FNLFSHWLNQQIAQ 237 >gi|309803457|ref|ZP_07697551.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LactinV 11V1-d] gi|308164466|gb|EFO66719.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LactinV 11V1-d] Length = 238 Score = 42.0 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 21/201 (10%), Positives = 53/201 (26%), Gaps = 5/201 (2%) Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + ++ ++ + + + + + + + Sbjct: 1 MIINRTLQQQYGSQVSKKKVNTAYDNARKQYGARFEMVLQQNGMTPEAYKESIQTNLLLQ 60 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224 A + +K IT + + + K E + + +K+++ Sbjct: 61 AALKDIKPITKAQEKKAWKEYQPKVRVQHILVEKEDTAKKVIEELGKGASFKDLAKKYST 120 Query: 225 KI-HDVSIGKAQYLLESD---LHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLG 279 + GK + SD + K T P TQ G I + G Sbjct: 121 DTGTSKNAGKIEPFDSSDTTLDADFKEAAFKLKTGEYTKKPVKTQFGYHIIKMIKHPSKG 180 Query: 280 GEIALKAYLSAQNTPTKIEKH 300 + K+ + A+ + Sbjct: 181 SFQSHKSEIIARIYQKMAQDQ 201 >gi|95929442|ref|ZP_01312185.1| Sporulation related [Desulfuromonas acetoxidans DSM 684] gi|95134558|gb|EAT16214.1| Sporulation related [Desulfuromonas acetoxidans DSM 684] Length = 387 Score = 42.0 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 16/199 (8%), Positives = 42/199 (21%), Gaps = 6/199 (3%) Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 A++EL + K E + + + + A + + Sbjct: 80 DQAIEELQLAIDKAPEEDFLHMEMGVFYLAAGRLPLAHQEFTRVLELNPGFSYGYYYLGE 139 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 L ++ + L ++E + + Sbjct: 140 VLFRLGEYNLSSMALVIAEKLGLPGFDLERKLTDLGWVLPEKPWHCEPHIYHLRRITLPT 199 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 Q + +F++ S G + + + F L Sbjct: 200 LTQARQ-----VMQRLEDGELFEELAREFSTGSEAQSGGYVGGISLTSMPENFSRELAGR 254 Query: 254 Q-NNTTNPYVTQKGVEYIA 271 + + G + Sbjct: 255 PCYSPAILLESSDGYHIVQ 273 >gi|307565745|ref|ZP_07628214.1| PPIC-type PPIASE domain protein [Prevotella amnii CRIS 21A-A] gi|307345571|gb|EFN90939.1| PPIC-type PPIASE domain protein [Prevotella amnii CRIS 21A-A] Length = 385 Score = 42.0 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 20/276 (7%), Positives = 62/276 (22%), Gaps = 31/276 (11%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 ++ A SS + +ING+V+T + + + A Q + + E Sbjct: 15 QAIAQSSSVVMSINGKVVTREEFEYAYKKNNKGSQHISVTAFAKQYAVYKQKVAAAEEAQ 74 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 E+ +++ + ++ + Sbjct: 75 LDKLS------SLNNDIDVLLSHKEEPKTYIKDNFKSTPFEQNAN--------LLYRIYN 120 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 + N L + + + + Sbjct: 121 DEIN--------------NNGGLFRYGEIFLSIKQHSTAYEEDKIHLLADSIYIALQHGD 166 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273 +K+++ + L + L P + G+ + + Sbjct: 167 NFETLAKKYSN--RKEEGVFFIATKNNMLEDVEKVLSTMKVGEICRPISSPFGLHILKLI 224 Query: 274 DKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKKL 308 + ++ + ++ + K+ Sbjct: 225 GREKFPTYKVIRPQLILQIEKSNLRKQIIEQQQNKI 260 >gi|257458734|ref|ZP_05623857.1| conserved hypothetical protein [Campylobacter gracilis RM3268] gi|257443722|gb|EEV18842.1| conserved hypothetical protein [Campylobacter gracilis RM3268] Length = 485 Score = 42.0 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 46/377 (12%), Positives = 86/377 (22%), Gaps = 69/377 (18%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI- 60 K SL I + T FV F + S + IT+ +++ + Sbjct: 5 MQKHKKSLIPTIWISTIAFVGAGFVGWGAYDMNANRAGS--IARVGQISITNQELNTKYS 62 Query: 61 ------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + Q N L++IAV +LI E + GI V F V Sbjct: 63 ELYNRLSAMSDGQFTQEQAKNMHLDQIAVDQLIGEAYFLNFAKDLGIQASDKDVAEFVVS 122 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI---------------------------- 140 A + + K++ Sbjct: 123 SPNFQENGAFSKELYDNVVRNSGLTKKEFERNLQKVLTLEKLGKALKITPSPKIVEAFAA 182 Query: 141 -QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 Q + V + K + + L + + Sbjct: 183 SQLMQDKVSAEIIYADANVTFSDDELKKFWEGEKSHFMTEKKYTLGAYFVAPSKADVNET 242 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHD------------VSIGKAQYLLESDLHP--- 244 + K +E R +KL FA D + + + L Sbjct: 243 ELSKFYKEHRGEYRSLDDKLLDFAEAKPDVLKDYRMDQVKKDATKDYLEIKKGKLDTNET 302 Query: 245 --------QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTP 294 + + P+ + G + K+ S + Sbjct: 303 IVATASNFPISEIEVAKPGDVIKPFEYKGGYLIAKLNGVEQPRQMSFEEAKSLASKEFET 362 Query: 295 TKIEKHEAEYVKKLRSN 311 K ++ + + N Sbjct: 363 KKRKELLEKRAQDALKN 379 >gi|123454927|ref|XP_001315212.1| PPIC-type PPIASE domain containing protein [Trichomonas vaginalis G3] gi|121897882|gb|EAY02989.1| PPIC-type PPIASE domain containing protein [Trichomonas vaginalis G3] Length = 879 Score = 41.6 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 14/153 (9%), Positives = 34/153 (22%), Gaps = 17/153 (11%) Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 K+ + R + Q E+ ++ + Sbjct: 55 KHTESNHPVSRNPNRLGRPIEKTKQEAYNIIKSLYEKIISGEKTFEEIAYIWSDDGSAEN 114 Query: 231 IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL-------GGEI 282 G + F + + N + P++T+ G D + Sbjct: 115 RGDLNWGAIEVYDTNFTKVAMSLKYNEISQPFLTRAGWHICKKTDGANSSYLSGGGPPFE 174 Query: 283 ALK---------AYLSAQNTPTKIEKHEAEYVK 306 + + K ++ Y+K Sbjct: 175 IEFFGAPLFMFSEPIRSYIKKIKNQEIYEYYLK 207 >gi|237716901|ref|ZP_04547382.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262405669|ref|ZP_06082219.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294644391|ref|ZP_06722154.1| putative lipoprotein [Bacteroides ovatus SD CC 2a] gi|229442884|gb|EEO48675.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262356544|gb|EEZ05634.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292640226|gb|EFF58481.1| putative lipoprotein [Bacteroides ovatus SD CC 2a] Length = 330 Score = 41.6 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 20/198 (10%), Positives = 57/198 (28%), Gaps = 5/198 (2%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIAL--LKLQKINGELEKIAVQELIVETLKK 87 I + + +NGE I +++ + + E++ + LI + L + Sbjct: 14 IACNTPVINKNDVVAEVNGEQILLSELASQSKQEIFDILNTAYEIKSRVLAGLIKQKLLE 73 Query: 88 QEIEKSGITFD---SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 +K ++ + V + + +G K L + + Sbjct: 74 DAAKKENMSLEEFIDWFVQQKICVGQDSLKKRYGFNTQSFYVKGELIPLVKGSLEEKLSY 133 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 +++ + + + K+ + E ++R + N F+ + Sbjct: 134 QQKLRSRIVQALVDSLYQKADIKRFLYPPKQPECVVRDLCVYYRGNLDSPVSFIVASDYN 193 Query: 205 AEESRLRLPKDCNKLEKF 222 E + + Sbjct: 194 CERCVQFEKTLSKLYDNY 211 >gi|167753138|ref|ZP_02425265.1| hypothetical protein ALIPUT_01409 [Alistipes putredinis DSM 17216] gi|167659452|gb|EDS03582.1| hypothetical protein ALIPUT_01409 [Alistipes putredinis DSM 17216] Length = 678 Score = 41.6 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 14/254 (5%), Positives = 52/254 (20%), Gaps = 27/254 (10%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + T + ++ + ++ I+ + + + + I+G I + + Sbjct: 4 LNTLRTRFGVVLSIIIAF--ALLAFILSLKTDMGLSGNDPKVGVIDGSKIRYSEYIEVYN 61 Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT-----------------FDSNTVNY 104 LK Q E + + +L + + + Sbjct: 62 NLKDQSNISESNEEQMDQLAEMAWQTLIANHVYLPGFEKMGISVTDAEREGLISGEYYSG 121 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND--------FMLKY 156 + D + + ++ ++ Sbjct: 122 TMAAAFTDPRTGQYSVEGVSDFIAQATGNPQMQYMWGALVGQAMREREINKYNGLVKGGV 181 Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 +E ++ + + ++ + + P Sbjct: 182 YVNRLEAEEGVDAQNKTFSGSWVGKRYHDMPDSLFSVSDSEIKAYYNSHKARYEQKPSRT 241 Query: 217 NKLEKFASKIHDVS 230 F Sbjct: 242 LSYVVFEVAPSAED 255 >gi|326435255|gb|EGD80825.1| peptidyl-prolyl cis-trans isomerase pin1 [Salpingoeca sp. ATCC 50818] Length = 115 Score = 41.6 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 12/102 (11%), Positives = 27/102 (26%), Gaps = 5/102 (4%) Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF----ASKIHDVS 230 E R + + K ++ E + ++ E + Sbjct: 11 KHEESRRCSSWKDEEGKTIRSRTKEQADDMLREFKRQIEAGEKSFEDIARVESDCGSAAQ 70 Query: 231 IGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIA 271 G + ++ P F+ +K ++ T G I Sbjct: 71 GGNIGEFTQEEIQAPFFEAFIKLKPGEMSDVVHTDSGSHIIK 112 >gi|257888119|ref|ZP_05667772.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,141,733] gi|257896990|ref|ZP_05676643.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium Com12] gi|257824173|gb|EEV51105.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,141,733] gi|257833555|gb|EEV59976.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium Com12] Length = 340 Score = 41.6 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 33/317 (10%), Positives = 79/317 (24%), Gaps = 39/317 (12%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + +K + V ++ S +++ T+ G IT D L Sbjct: 1 MQTLMKKKSIILAATSALAVLTLAACS-GDTNKDIATMKGGTITVSDFYDEAKL------ 53 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + VQ +I+ + K G V+ + + A++ G + E Q Sbjct: 54 -ESSNQSLVQRMIIYKV---FNNKYGDKVTDKQVDAEYDKQAKSLGDTFES-------QL 102 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + K + + ++ + Sbjct: 103 ETAGYTKDSYKEYIRNNLAFEAGLKAHVDITDDDLKTAWESFHPE------------VEA 150 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 + K +K + + K + D K + + Sbjct: 151 QIIKLSSEDEAKDVKKSADDGDDFSKLAEDKSTDSETKEDGGKVKFDSTTTTIPAEVKEA 210 Query: 249 LLKKSQNNTTNPYVTQKG------VEYIAICDKRDLGGEIAL-KAYLSAQNTPTKI--EK 299 K ++ + + ++ G ++ K L T TK+ Sbjct: 211 AFKLKDGEVSDVITATNTTSYATEYYVVKMVKNQNKGNDMDKYKDQLKEIATETKLSDNA 270 Query: 300 HEAEYVKKLRSNAIIHY 316 + + + +A + Sbjct: 271 FTTKVIGEELKDANVKI 287 >gi|261416875|ref|YP_003250558.1| hypothetical protein Fisuc_2490 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373331|gb|ACX76076.1| hypothetical protein Fisuc_2490 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325951|gb|ADL25152.1| putative lipoprotein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 693 Score = 41.6 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 35/353 (9%), Positives = 75/353 (21%), Gaps = 74/353 (20%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA------------- 61 + V FC + + S + +NGE I D + + Sbjct: 1 MKKALLVFCSFCALVLSGCNSIGDKDTLVARVNGEPIFKEDYAFMMRVGNIVPNTEQMRK 60 Query: 62 -----------LLKLQKINGELEKI---------------AVQELIVETLKKQEIEKSGI 95 + N EL++ Q L ++ Sbjct: 61 ASSSLFSRKALYTVALQKNPELKEQLEAHNVALENYLLTFVYQRLYTMDRLMYTDDELAF 120 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ-----GIGDNHFKQYLAIQSIWPDVVKN 150 +D + + N D + + + +K Sbjct: 121 YYDKHRDQFADSLSYMNLRDKVADAKYIESNYDSLKSYAFKHRDLSDTSREVKITYDIKE 180 Query: 151 DFML----------------KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 F+ KY E EI + + + F + + + Sbjct: 181 RFVSDHRQRIVRETGPALLKKYNIQETEIQMPSAEAYYEKHKNLYMTPGGFVVYHVESAD 240 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL--------LESDLHPQF 246 + KR K + K +K + +K + G + + F Sbjct: 241 SAKLAKRFKGKKVDLKGFMKIASKFSE--NKDTKAAKGFVGKVVYGHPLPYGIGFVPNMF 298 Query: 247 QNLLKKSQNNTTNPYVTQKG--VEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 L ++ ++ + E + Sbjct: 299 VALDTLKDGAISSVIKSESTGRYHVFYRESV--VQPEQKPLDRVRKSIERDLA 349 >gi|253580888|ref|ZP_04858150.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847730|gb|EES75698.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 410 Score = 41.6 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 23/323 (7%), Positives = 68/323 (21%), Gaps = 28/323 (8%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKRIALLKLQKING 70 + T L V ++S + T++G I G +S + Q Sbjct: 1 MVKRTAVVTLAGVMSVGMLSGCGSKTLDGTKTVATVDGTDIPLGVVSLYAREQQQQTTTM 60 Query: 71 ELE-----KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 L + + + +++ + + + ++ Sbjct: 61 YLNYMGSADNIWDQTAGDDSDETYGDQAVTSSLESVEKMYILKEKAADYNVELTDDDEAA 120 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK--------MKNITVRE 177 V ++ ++ + + Sbjct: 121 IADAASQFMAANSEETIKELAVTEDQVKTLLELQTIQKKMYDPVVAEGKITVSDDEANQT 180 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP---KDCNKLEKFASKIHDVSIGKA 234 + + D+ + +K +++ + V Sbjct: 181 TFTYVSISTSGDDITDEEKKTKKEQAQEILDKMKEDPTADMSEIAKGVDDSYSAVQGNFT 240 Query: 235 QYLLESDL---------HPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIAL 284 E + + L + T G + + D + Sbjct: 241 TKESEDEDEDSGSEAYPDEVLKVLRGLKDGEVADNIIETDTGYYVVRLDKINDEDATASK 300 Query: 285 KAYLSAQNTPTKIEKHEAEYVKK 307 + L T A+++ + Sbjct: 301 RESLQNSKESTYFTDTTAKWLDE 323 >gi|172037269|ref|YP_001803770.1| hypothetical protein cce_2354 [Cyanothece sp. ATCC 51142] gi|171698723|gb|ACB51704.1| unknown [Cyanothece sp. ATCC 51142] Length = 267 Score = 41.6 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 19/255 (7%), Positives = 56/255 (21%), Gaps = 31/255 (12%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 I I + I+ ++ +A +L + +L E + Q I T + Sbjct: 12 NIVLKIGDQAISSEELYPLLAQYRL-----------LPQLAKEIIIDQAIADITCTPEET 60 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + + + + L +L+ Sbjct: 61 NLAKQQFYQRLQISDETQLKAWLDAHGMT------------------QEQLEKLSVRDLK 102 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 +E + + L + + ++ + + Sbjct: 103 IEKFKQLTWADKLDPYFVKCKGQLDRVVYSLIRTKDPGVAQELYFRIQEGE-NTLSELAR 161 Query: 221 KFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 +++ + G + + Q L + P + + Sbjct: 162 QYSQGSEAQTGGLLGPVELNTPHPKIAQILAASRPGQLSPPTQIGDWWIILRLEKYMSAQ 221 Query: 280 GEIALKAYLSAQNTP 294 + + L + Sbjct: 222 LDDKTRQRLLNELFQ 236 >gi|307152561|ref|YP_003887945.1| parvulin-like peptidyl-prolyl isomerase-like protein [Cyanothece sp. PCC 7822] gi|306982789|gb|ADN14670.1| parvulin-like peptidyl-prolyl isomerase-like protein [Cyanothece sp. PCC 7822] Length = 246 Score = 41.6 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 21/256 (8%), Positives = 67/256 (26%), Gaps = 31/256 (12%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100 + I + IT+ D+ +A +L +++I + + I E + Sbjct: 2 TVVLQIGEQKITESDLYSLLAQYRLL--PQLIKEIIIDQAIAPIECTPEEIQMARN---- 55 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + +N + ++L +Q + + + + K Sbjct: 56 ------FFYQQNQLTNEAQVQAWLQQQRMTQEQLEHLSVRDLKLEKFKQATWTNKIEPYF 109 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 ++I ++ +R + + + Sbjct: 110 LKIKGKLDRVIYSLIRTKDAGIAQELYFRIQNEE------------------NTFEELAK 151 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 +++ + G + + HP Q L+ P + + + + + Sbjct: 152 QYSQGPEAQTAGLIGPVELNVPHPTIGQILMGSQPGQLWPPTQVGEWIIIVRLEKRISAQ 211 Query: 280 GEIALKAYLSAQNTPT 295 + + + + Sbjct: 212 LDQQTQQRILNELFQE 227 >gi|186685006|ref|YP_001868202.1| hypothetical protein Npun_R4914 [Nostoc punctiforme PCC 73102] gi|186467458|gb|ACC83259.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102] Length = 256 Score = 41.6 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 25/262 (9%), Positives = 65/262 (24%), Gaps = 23/262 (8%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 I IT ++ + Q + ++ + E I + Sbjct: 4 AIQIGNRTITARELISLLGNY--QMLPQLQRELIIDEAIEQ-------NSRSEKIAIECT 54 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 Q + + + + + + + F ++E Sbjct: 55 PEEIAQAKQQFYVEKQLKNEEDIQAWMTHQGLTIEQIEVITTRKLKIEKFKQATWGNKLE 114 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + K K V L+R V + + + + ++ Sbjct: 115 SYFFQSKAKLDKVIYSLLR-------------TQDVGIAQELYFRIQAKENSFADLAREY 161 Query: 223 ASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + + G + + LHP Q L P + + + + Sbjct: 162 SLGPEAQTGGLVGPIELNALHPIMVQMLSSSQPGQILPPTRIAEWFVILRLEKFIPAQLD 221 Query: 282 IALKAYLSAQNTPTKIEKHEAE 303 +K L + T +++ + + Sbjct: 222 EFMKVRLLNELFETWLQEQQKQ 243 >gi|237722124|ref|ZP_04552605.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229448993|gb|EEO54784.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 330 Score = 41.6 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 20/198 (10%), Positives = 57/198 (28%), Gaps = 5/198 (2%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIAL--LKLQKINGELEKIAVQELIVETLKK 87 I + + +NGE I +++ + + E++ + LI + L + Sbjct: 14 IACNTPVINKNDVVAEVNGEQILLSELASQSKQEIFDILNTAYEIKSRVLAGLIKQKLLE 73 Query: 88 QEIEKSGITFD---SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 +K ++ + V + + +G K L + + Sbjct: 74 DAAKKENMSLEEFIDWFVQQKICVGQDSLKKRYGFNTQSFYVKGELIPLVKGSLEEKLSY 133 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 +++ + + + K+ + E ++R + N F+ + Sbjct: 134 QQKLRSRIVQALVDSLYQKADIKRFVYPPKQPECVVRDLCVYYRGNLDSPVSFIVASDYN 193 Query: 205 AEESRLRLPKDCNKLEKF 222 E + + Sbjct: 194 CERCVQFEKTLSKLYDNY 211 >gi|283953940|ref|ZP_06371469.1| peptidyl-prolyl cis-trans isomerase D [Campylobacter jejuni subsp. jejuni 414] gi|283794545|gb|EFC33285.1| peptidyl-prolyl cis-trans isomerase D [Campylobacter jejuni subsp. jejuni 414] Length = 496 Score = 41.6 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 37/374 (9%), Positives = 96/374 (25%), Gaps = 77/374 (20%) Query: 3 SKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL 62 K + ++ ++ + FV F + SS T+ E I+ + R Sbjct: 8 HKKYLVVTIWVSTI--AFVGAGFLGWGAYDFNLNRSSS--VATVGNEKISFSEFDTRYRQ 63 Query: 63 L-------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 + +E IA+ L+ + L + G+ + N + Sbjct: 64 ILSYYNQISNGALTPENAEQLGIENIALSSLVEDKLLLNFAKDLGVDANENEILQKLANT 123 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM---------------- 153 + + + + +N + Q +V Sbjct: 124 REFQDPTGDFNKTIYYELLNVNNLTPKDYETQLANEVIVGKLDHIFNIPNKDEELKMLAS 183 Query: 154 -----------------LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 E ++ + K + + + +P + + Sbjct: 184 SYFMRDALSIAKIDYDKKNIKINEEDLKKLWSEHKEDYKTKKMYEISTYFLPSSNEKIDD 243 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHD---------------------VSIGKAQ 235 ++ + +E++L+ K+ F S ++ + + Sbjct: 244 KELEKFYNQDENKLKYKDFAGKVMDFQSAKNEVAKDYALMQLKSVANAKFLDLKNGKDSF 303 Query: 236 ----YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLS 289 + ESD++ L K + P + G + + + + + Sbjct: 304 QKDHNISESDVYYPIDLLNKAKNGDVLRPVLYNNGYIIVKLNKVDPIRNKTFEEARDEVL 363 Query: 290 AQNTPTKIEKHEAE 303 + K+ E Sbjct: 364 PIYLSEQARKNLEE 377 >gi|115443012|ref|XP_001218313.1| peptidyl-prolyl cis-trans isomerase ssp-1 [Aspergillus terreus NIH2624] gi|114188182|gb|EAU29882.1| peptidyl-prolyl cis-trans isomerase ssp-1 [Aspergillus terreus NIH2624] Length = 212 Score = 41.6 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 9/196 (4%), Positives = 30/196 (15%), Gaps = 20/196 (10%) Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 S F + + + Sbjct: 7 PVSIQVETGLPAGWEVRHSNSKNLPYYFCPATKESRWEPPADTDTEKLKVYMANYHSAPA 66 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + + + R + + + ++ + Sbjct: 67 GRPEFGQGEGKIRCSHLLVKHRESRRPSSWREAEITRSKEEAIEILRGHERRIQSGEATL 126 Query: 216 CNKLEKFASKIHDVSIGKA-------------------QYLLESDLHPQFQNLLKK-SQN 255 + + G + ++ +F++ Sbjct: 127 GEIAKSESDCSSARKNGDLYVFAGVPQSSTWMRLTHSSGFFGRGEMQKEFEDAAFALQPG 186 Query: 256 NTTNPYVTQKGVEYIA 271 + T GV I Sbjct: 187 EVSGIVDTASGVHLIE 202 >gi|238923933|ref|YP_002937449.1| hypothetical protein EUBREC_1571 [Eubacterium rectale ATCC 33656] gi|238875608|gb|ACR75315.1| Hypothetical protein EUBREC_1571 [Eubacterium rectale ATCC 33656] Length = 329 Score = 41.6 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 20/164 (12%), Positives = 48/164 (29%), Gaps = 5/164 (3%) Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + +I + + + + + ++ +QK ++E Sbjct: 129 LNEAEKKFTKADLSDIESAYEHYAIAQKLYNSLSKGVDTEVSDEDARVIHIQKIFVKSKE 188 Query: 208 SRLRLPKD---CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVT 263 S + + AS + S + Y + L + + + + T++ T Sbjct: 189 SADAVSQKLLSKEDFAAVASGSSEDSQTEL-YAAKGTLPQEVEAVAFELGDGETSDMIST 247 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 G +I K D K + + + +VKK Sbjct: 248 DDGYYFIKCISKLDREKTEQNKVTILQKRQQEQFNDDYEHFVKK 291 >gi|95928628|ref|ZP_01311375.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) [Desulfuromonas acetoxidans DSM 684] gi|95135418|gb|EAT17070.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) [Desulfuromonas acetoxidans DSM 684] Length = 1012 Score = 41.6 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 30/248 (12%), Positives = 69/248 (27%), Gaps = 17/248 (6%) Query: 3 SKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT------TI--NGEVITDG 54 + TSL I + V++ F + + S ++ + T+ +G + Sbjct: 360 QALMTSLRSQIAQGALFIVVLGFILWAVGQRLSRSIKDNVTVLNRALETVAGDGREVELD 419 Query: 55 DI--SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 D+ + IA+ + E +IA EL +T + V+ N Sbjct: 420 DVKFDEFIAIGQAANRMLEQRRIAEDEL-NDTRLRFRTALERAPLMVALVDPQRYILFSN 478 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYL------AIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 + + + Q + + + F + N++ E Sbjct: 479 SMWNDAVPMDVCAAHLEAHWFSEASWVKFDTAFDQMVKGRLQQERFDICLKNVQGEKRYY 538 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + I + ++L D + Q + ++ L E+ + Sbjct: 539 DMALATIQNADGENSSILVMARDITERRQAEERLTWLAHYDALTGLAHRNYAKEQLEQML 598 Query: 227 HDVSIGKA 234 Sbjct: 599 TGEVADDL 606 >gi|187931475|ref|YP_001891459.1| hypothetical protein FTM_0703 [Francisella tularensis subsp. mediasiatica FSC147] gi|187712384|gb|ACD30681.1| conserved hypothetical protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 477 Score = 41.6 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 16/166 (9%), Positives = 43/166 (25%), Gaps = 7/166 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI-RTTINGEVITDGDISKR 59 M L + + IF I + + + SSR + I+ + Sbjct: 1 MLQSFNDRLKGPFTWIVVISISFIFVISGMTFFFTNIGSSRAYVAKVGDNEISSQQFQQY 60 Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 E ++ + ++I + L + ++ I + + + Sbjct: 61 AQ----SATTEEQKRAILSQMIDQYLILADAQRHDIVVSKLALQSAIFTNPMFF--DKDG 114 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 S + + Q + ++ + + I Sbjct: 115 KFSAEKLKQVVAYLGGMDKLEQILAQNIQATIIPKTIVDTSIVIDY 160 >gi|222824176|ref|YP_002575750.1| peptidyl-prolyl cis-trans isomerase D [Campylobacter lari RM2100] gi|222539398|gb|ACM64499.1| conserved hypothetical protein, putative peptidyl-prolyl cis-trans isomerase D [Campylobacter lari RM2100] Length = 492 Score = 41.6 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 37/362 (10%), Positives = 93/362 (25%), Gaps = 71/362 (19%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI------------ 60 + + + + V SY S + E I+ + + + Sbjct: 14 VTIWISVIAFVGAGFVGWGSYDFNTDRSNSVAKVGDEKISYDEFNLKYSQLFGYYSQLNN 73 Query: 61 -ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG----L 115 + Q L+ A+ ELI E L + G+ + Y Sbjct: 74 GNYTQEQAQKDGLDTQAINELIQEKLLLSYAKTLGLNVSEEEIAYDLAHQKIFHNASGVF 133 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV---------------------------V 148 + + L + +++ + + + + V Sbjct: 134 DKNLYYNLLARNNYTPKTYEKIIHDELLLKKINAILNLQIKPNELDMFGASFLMQDSLKV 193 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + E + KN + + L + N + ++ EE+ Sbjct: 194 QAIKLDNKNITMDEKELKQTWEKNKELYKTQRSYELATYFLNPDIIKIDDKEIQAYYEEN 253 Query: 209 RLRLPKDCNKLEKFASKI-------------------------HDVSIGKAQYLLESDLH 243 + K+ ++++ K + ++D++ Sbjct: 254 KNDYKDFAGKILSLEQSKDKVIKDLKLSKLKLKANESYVALRKNELNFDKNITISDADVY 313 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHE 301 +N+ K +N+ P+ + G + + K +S K + Sbjct: 314 YPLENIQKAKENDFIKPFKFENGYMIAKVIKINPIQTMTFEQAKNEVSKLYIKEKTKALL 373 Query: 302 AE 303 E Sbjct: 374 EE 375 >gi|113477056|ref|YP_723117.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Trichodesmium erythraeum IMS101] gi|110168104|gb|ABG52644.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Trichodesmium erythraeum IMS101] Length = 254 Score = 41.6 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 20/271 (7%), Positives = 76/271 (28%), Gaps = 27/271 (9%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 M S+ T+ E ++ G + + L+ V + ++E + + I Sbjct: 1 MESQALLTVGEEEVSWG---QSLKYLQASGKLQSFVTEIVAQYVIEKELQ---SRKDIDV 54 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 D + + L ++ + + + ++ +V + + + Sbjct: 55 DQAIIQQAIIDFRLQRKLEDQEK--------FQEWLKQNGINYNALESQIVNSFRLKQLK 106 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + + + + +I + + + + K + Sbjct: 107 DSITSERIEEYFNQRKAGLDSVILSRIVV---------QDKELVDALYRKIVEDGAKFED 157 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276 ++++ G + + L ++ + + + P+ T + + + Sbjct: 158 LAKEYSVTNDKNFNGIMGVVSLASLPEDLRDTINSANSGDILGPFKTNQFWSIFRLEQLQ 217 Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + + E+ E ++ Sbjct: 218 GASLDNP---EIKKKLNSELFERWITEQLQN 245 >gi|212696154|ref|ZP_03304282.1| hypothetical protein ANHYDRO_00690 [Anaerococcus hydrogenalis DSM 7454] gi|212676783|gb|EEB36390.1| hypothetical protein ANHYDRO_00690 [Anaerococcus hydrogenalis DSM 7454] Length = 306 Score = 41.6 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 33/326 (10%), Positives = 87/326 (26%), Gaps = 44/326 (13%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL---- 65 I+ T ++ +FC++ + + ++G+ I+ K ++ + Sbjct: 6 KVLIQKKTIIAIISLFCLILVSCSSKIDKKNN-VAYVDGQAISKNLYEKELSYYQKFYLK 64 Query: 66 --------------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 LE + LI + + ++ K+ + N ++ Sbjct: 65 KYGNDYLDKKTKNGLTNYERLESELLDSLIQDQIMINDLRKNKVKITKNDSLEVIEDLSK 124 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 +S + + G ++ F + + SI + F + K+ Sbjct: 125 K-SMSKDSLIENVKSFGADEDEFDEISYMDSIRKKHMDYYFSNDDTKDSEIVDYFKENKF 183 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 +Y K++ + K S++R + Sbjct: 184 LQKKYKYDCLIFDNESEAIKIRANIKNSQDFKKYLNSKVRNYDIYRSDFVYNDDF----- 238 Query: 232 GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 + K + + + + + I + L Sbjct: 239 -------------LLKESSLKKADQISKIFKYKDSYIILMINSV------NQNENDLLID 279 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHYY 317 ++ +Y+K L N+ I + Sbjct: 280 AKKIYLKNEYDKYLKNLIKNSNIKLF 305 >gi|328676007|gb|AEB28682.1| Peptidyl-prolyl cis-trans isomerase ppiD [Francisella cf. novicida 3523] Length = 477 Score = 41.6 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 14/161 (8%), Positives = 40/161 (24%), Gaps = 7/161 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI-RTTINGEVITDGDISKR 59 M L + + IF I + + + SSR + I+ + Sbjct: 1 MLQSFNDRLKGPFTWIVVISISFIFVISGMTFFFTNIGSSRAYVAKVGDNEISSQQFQQY 60 Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 ++ + ++I + L + ++ I + + + Sbjct: 61 AQ----SATTDIQKRAILSQMIDQYLILADAQRHNIVVSKLALQSAIFTNPMFF--DKDG 114 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 S + + Q + ++ + Sbjct: 115 KFSADKLKQVVAYLGGMDRLEQMLTQNIQATIIPKTIVDTS 155 >gi|90423968|ref|YP_532338.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisB18] gi|90105982|gb|ABD88019.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisB18] Length = 662 Score = 41.6 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 16/167 (9%), Positives = 49/167 (29%), Gaps = 18/167 (10%) Query: 1 MTSKVFTSLSDF----IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI 56 M + + S++ I ++ +++ F + I S I I+ Sbjct: 30 MLRGIRKASSNWVGKTIMIIVMSVLILSFAVWGIADIFKGFGQST-LAKIGSTEISTEQF 88 Query: 57 SK----RIALL---------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + R+ + + Q +++ +Q+ + E ++ + G+ Sbjct: 89 RQLYTERLQQIGRQFGRPLTQDQARAFGIDRQVLQQAVAEAALDEDARRIGLGQSDAETM 148 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 V G + + + + +Q + + + Sbjct: 149 RTIVSDPNFRGTNGGFDRARFAQAIRQFGYTEQRYIAEQRKVSLRRQ 195 Score = 38.1 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 24/256 (9%), Positives = 61/256 (23%), Gaps = 15/256 (5%) Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 + Q+ +IA K ++ + + A + G A Sbjct: 180 EQRYIAEQRKVSLRRQIAGTLTAELEPPKTLLDALTRFQNEQRSIDYVKLDANHAGTIAP 239 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 L + + I + + + K+ + E + + Sbjct: 240 PSPEVLAAYYADHKTQFRAPEYRKISFVALTPEAVAKWTTVSDEDAKKVYEARRDKFSTP 299 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 R + + N + Q K + ++ D + Sbjct: 300 ERRQITQIVFPNAEEAQAARAKI--------TGGLSFDDLAKERGLSPADA---DLGLVS 348 Query: 239 ESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTP 294 ++++ N+ + P + GV + + ++ L Sbjct: 349 KAEILDPAVADAAFALPANDVSQPIPGRFGVTLLKVGKIEPGSQQSFESVAPALKRDIAI 408 Query: 295 TKIEKHEAEYVKKLRS 310 K A+ K+ Sbjct: 409 DKARASIADLHNKMED 424 >gi|159901476|ref|YP_001547723.1| hypothetical protein Haur_4965 [Herpetosiphon aurantiacus ATCC 23779] gi|159894515|gb|ABX07595.1| hypothetical protein Haur_4965 [Herpetosiphon aurantiacus ATCC 23779] Length = 463 Score = 41.6 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 21/222 (9%), Positives = 60/222 (27%), Gaps = 20/222 (9%) Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 N V+ + E+ S++ D + + +++ K Sbjct: 205 NRVDSAVTTYFGTLREFIEETSTYGLATLPFDREAFKAFVLHQERLQLMRQKLGEKLVTE 264 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 + I + I V + D + K D ++L + Sbjct: 265 DQAIKEVYADAQQIFVT-----ANITDPADPMTVTKWLQAKTKIDDIAAQLTDTASFTDV 319 Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQ--FQNLLKKSQNNTTNPYVTQKGVEYIAICDK-- 275 + + + S + + + PY + +G I + + Sbjct: 320 QILNTNDNATDNPTTGMQPLSQYAAFGITEPISTQEVGVIGKPYQSTQGWHIILVNQREW 379 Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 R ++ K ++ ++++ R+ + + + Sbjct: 380 RPSQSDLTTKR-----------DEAVNKWIEDKRAVSNVQRF 410 >gi|115524599|ref|YP_781510.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisA53] gi|115518546|gb|ABJ06530.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisA53] Length = 633 Score = 41.6 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 28/397 (7%), Positives = 88/397 (22%), Gaps = 87/397 (21%) Query: 1 MTSKVFTSLSDFIKLLTT----YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI 56 M + + S++I + +++ F + I S TI I+ Sbjct: 1 MLRGIRKASSNWIGKIILSTVMGVLILSFAVWGIGDIFKGFGRST-AATIGSTEISTEQF 59 Query: 57 SK----RIALLKLQKING---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + R+ + Q +++ +Q+ + E ++ + G+ Sbjct: 60 RQLYTERLQQIGRQFGKPLTPDQARAFGIDRQVLQQAVAEAALDEDARRKGLGQSDAETM 119 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF----------- 152 + G + + + + + +Q + + + Sbjct: 120 RTILSDPNFKGTAGKFDPARFGQVLRQFGYTEQRYIAEQRRVSLRRQIAGTLTAGLIPPK 179 Query: 153 ------------MLKYGNLEMEIPA--------------NKQKMKNITVREYLIRTVLFS 186 ++++ KN + + Sbjct: 180 TLIDALGRYQNEQRTIDYVKLDAAHAGPIEPPSPEALAAYFADHKNQFRAPEYRKASFVA 239 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-----------KIHDVSIG--- 232 + + + V R + + + + G Sbjct: 240 LTPDAVAKWTTVSDEDAKKAYEDRREKFATPERRQVSQIVFPTSADAQAARSKIDGGASF 299 Query: 233 --------------KAQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276 + ++ + N + P + GV + Sbjct: 300 EDIAKERGLSATDIDLGLVAKAGILDPAVAAAAFALPANQVSQPVNGRFGVALAKVGAIE 359 Query: 277 D--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 ++ A L + ++ K+ + Sbjct: 360 PGSQQSFESVAADLKRDIAIERARASISDLHNKMEDD 396 >gi|257880272|ref|ZP_05659925.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,230,933] gi|257882126|ref|ZP_05661779.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,231,502] gi|257885317|ref|ZP_05664970.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,231,501] gi|257890929|ref|ZP_05670582.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,231,410] gi|260562427|ref|ZP_05832941.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium C68] gi|257814500|gb|EEV43258.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,230,933] gi|257817784|gb|EEV45112.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,231,502] gi|257821173|gb|EEV48303.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,231,501] gi|257827289|gb|EEV53915.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,231,410] gi|260073351|gb|EEW61692.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium C68] Length = 340 Score = 41.2 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 32/320 (10%), Positives = 86/320 (26%), Gaps = 45/320 (14%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + +K + V ++ S +++ T+ G IT D L Sbjct: 1 MQILMKKKSIILAATSALAVLTLAACS-GDTNKDIATMKGGTITVSDFYDEAKL------ 53 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + VQ +I+ + K G V+ + + A++ G + E Q Sbjct: 54 -ESSNQSLVQRMIIYKV---FNNKYGDKVTDKQVDAEYDKQAKSLGDTFES-------QL 102 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + K + + ++ + + ++ Sbjct: 103 EAAGYTKDTYKEYIRNNLAFEAGLKAHVDITDDDLKTAW-----KSFHPEVEAQIIKLSS 157 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF- 246 +++ ++ + ++ GK ++ + P Sbjct: 158 EDEAKDVKKSA----------DDGDDFSKLAKDKSTDTETKEDGGKVKFDSTTTTIPAEV 207 Query: 247 -QNLLKKSQNNTTNPYVTQK------GVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKI- 297 + K ++ T + + ++ G ++ K L T TK+ Sbjct: 208 KEAAFKLKDGEISDVITTTNPTSYATEYYVVKMVKNQNKGNDMDKYKDQLKDIATETKLS 267 Query: 298 -EKHEAEYVKKLRSNAIIHY 316 + + + +A + Sbjct: 268 DNAFTTKVIGEELKDANVKI 287 >gi|306829356|ref|ZP_07462546.1| peptidyl-prolyl cis-trans isomerase [Streptococcus mitis ATCC 6249] gi|304428442|gb|EFM31532.1| peptidyl-prolyl cis-trans isomerase [Streptococcus mitis ATCC 6249] Length = 313 Score = 41.2 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 27/290 (9%), Positives = 74/290 (25%), Gaps = 39/290 (13%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 I V ++ S + + ++ G+VIT+ + N +++ + I Sbjct: 9 AITLLSVATLAACSNSSEGKDLISMKGDVITEHQFFDEVK------NNPTAQQVLLNMTI 62 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 + ++Q + + V ++ + + + Q Sbjct: 63 QKVFEQQYGSEVTDKDVDDAVAEEQKKYGDSYNSVLQRAGMTPET-----------RKAQ 111 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 +V+ E E+ + + + ++ ++K + K Sbjct: 112 IRTSKLVELAVK---KAAESELTDEAYQKAFESYTPDVTAQIIRLDNEDKAKEVLEKAKA 168 Query: 202 IKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLES-DLHPQFQNLLKK-SQNNTT 258 ++++ + G+ + S +L Q + N + Sbjct: 169 ---------EGADFAQLAKEYSNDDKTKENGGEITFDSASTELPEQVKKAAFALDVNGIS 219 Query: 259 NPYVT------QKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE 301 + I + K + K L K Sbjct: 220 DVITATGTQAYSNQFYIIKVTKKTEKSSNIEDYKEKLKTIILTQKQNDSA 269 >gi|199599019|ref|ZP_03212426.1| peptidylprolyl isomerase [Lactobacillus rhamnosus HN001] gi|199590055|gb|EDY98154.1| peptidylprolyl isomerase [Lactobacillus rhamnosus HN001] Length = 300 Score = 41.2 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 38/288 (13%) Query: 14 KLLTTYFVLIIFC--IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 K L F+ + I+ + +S S T +G +T K + Sbjct: 3 KKLRVPFLAAMMASSIMLLSGCQSKQADSTTVATYSGGQVTQASFYKELK-------QSP 55 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 K + L++ + KS T + E+F+SFL + G Sbjct: 56 TTKTVLANLLIYRALNKAYGKSVSTKSVDNTYN------SYKNEYGENFTSFLSQNGFSK 109 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + F+Q + + +K K N +++ + ++ +L S Sbjct: 110 SSFRQSIRTNLLSEVALKKL--KKVTNSQLKTAWKTY------QPKVTVQHILTSDESTA 161 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLES-DLHPQFQNL 249 Q + + ++ GK + S L F++ Sbjct: 162 KQIISDLAA-----------GKDFTTLAKTYSIDTSTKDKGGKVSFESSSKSLDSTFKDA 210 Query: 250 LKK-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 K T P G E I + + G K L+A Sbjct: 211 AYKLKNGEYTQSPVKVTNGYEVIKMIEHPAKGTFSDSKKALTASVYSK 258 >gi|291544303|emb|CBL17412.1| PPIC-type PPIASE domain [Ruminococcus sp. 18P13] Length = 489 Score = 41.2 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 12/119 (10%), Positives = 37/119 (31%), Gaps = 6/119 (5%) Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN- 248 + + +++ + +++++ S G + + ++ +F Sbjct: 357 SAEAALERAKAVLEEWKNGAANEASFAELAKQYSADGSASSGGLYEMVYPGEMVEEFDQW 416 Query: 249 -LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 + ++ T+ TQ G + +A +S + + E VK Sbjct: 417 CFDESRKDGDTDIVETQYGAHVMYFVK----HSLPKWEADISGKLDNEGYKAAYDELVK 471 >gi|298291797|ref|YP_003693736.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Starkeya novella DSM 506] gi|296928308|gb|ADH89117.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Starkeya novella DSM 506] Length = 629 Score = 41.2 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 43/162 (26%), Gaps = 8/162 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + S S + + +++ F I I S TI IT + + Sbjct: 1 MLETLRKSASGIVAKILMGLLIVSFGIWGIADVFRGFGSQT-LATIGDTEITVPEFRQLY 59 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 Q I ++ + A++ GL+ D Sbjct: 60 QQRLQQVSQQLKRGITPEQ-------ARAFGIPDQLLQEQLAEAALNDQAKSLGLALSDA 112 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 Q + + +++++ + +E E Sbjct: 113 EIARRVQSNPSFFGPGGSFDPNYFNQLLRSNGFTEARFVEAE 154 >gi|146341037|ref|YP_001206085.1| putative peptidylprolyl isomerase [Bradyrhizobium sp. ORS278] gi|146193843|emb|CAL77860.1| Putative Peptidylprolyl isomerase [Bradyrhizobium sp. ORS278] Length = 636 Score = 41.2 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 18/216 (8%), Positives = 43/216 (19%), Gaps = 14/216 (6%) Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + + A G L + + I +V + + K+ Sbjct: 190 NEQRSIDYVKLDAAQAGTIETPAPEVLATYFDEHKAQFKAPEYRKISFVLVTPEEIGKWT 249 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 + E + + R V + Q + + Sbjct: 250 TVSDEDARKVFDQRKALMGTPEKRQVQQMTFPTMEEAQAARARIASGEVTFDELAKERNL 309 Query: 218 KLEKFASKIHDVSIGKAQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 + +S + + P V + + Sbjct: 310 NPADL----------DLGLVTKSAILDPAVADTAFSLPTGEVSQPVKGAFNVALVKVSAI 359 Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + G+ ++A + V LR Sbjct: 360 QP--GQEPAYESVAADIKKEIAAERAKSEVATLRDK 393 >gi|294500655|ref|YP_003564355.1| lipoprotein [Bacillus megaterium QM B1551] gi|294350592|gb|ADE70921.1| lipoprotein, putative [Bacillus megaterium QM B1551] Length = 300 Score = 41.2 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 34/308 (11%), Positives = 85/308 (27%), Gaps = 43/308 (13%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSS--------------RIRTTINGEVITDGDISKRIALL 63 +L + + ++ S+ + G +T + ++ +A+ Sbjct: 6 LKLLLAVLTALGFLTGCEGKHSNTMFPSVEISQLSSTKELAAYEGGKVTGAEFNRFLAVE 65 Query: 64 KLQKINGEL-----EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 + L K +++L+++ + + + + + Sbjct: 66 GFLNPDAPLNDTSYRKELLRQLVMQKILI---SHLKTSDKVQKQVEDMWKQIKRSYDEDT 122 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + + Q ++ F + + E+ Y Sbjct: 123 RKQGYEVLNIRSS-----DVTNQLTNQFKLEEYFRKQITSDEL--------------TAY 163 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 R + Q A + + +K+A I A L Sbjct: 164 YKRIENDLTRVSFTQLAFSTLHDAAAAAAELQKGTSLQDVQKKYADVQTVSKIENADNLK 223 Query: 239 ESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 S L P F ++LKK ++ P K + I ++D E +K + + I Sbjct: 224 LSSLSPSFIDVLKKQHIGESSEPIKMGKVYYIL-ILKQKDKKTESEVKEEMMKELVLNHI 282 Query: 298 EKHEAEYV 305 ++ + + Sbjct: 283 NRYIQDQL 290 >gi|254374458|ref|ZP_04989940.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|151572178|gb|EDN37832.1| conserved hypothetical protein [Francisella novicida GA99-3548] Length = 477 Score = 41.2 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 30/302 (9%), Positives = 76/302 (25%), Gaps = 13/302 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI-RTTINGEVITDGDISKR 59 M L + + IF I + + + SSR + I+ + Sbjct: 1 MLQSFNDRLKGPFTWIVVISISFIFVISGMTFFFTNIGSSRAYVAKVGDNEISSQQFQQY 60 Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 E ++ + ++I + L + ++ I + + + Sbjct: 61 AQ----SATTEEQKRAILSQMIDQYLILVDAQRHDIVVSKLALQSAIFTNPMFF--DKDG 114 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 S + + Q + ++ + + + + + +I Sbjct: 115 KFSAEKLKQVVAYLGGMDKLEQILAQNIQATIIPKTIVDTSIVTDYDTKLLNSIYSVNKY 174 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 I + S D K Q + Q + + K + D ++ + Sbjct: 175 IDYLKVSPTDFKSQIKPSQQDLQSYYDSHKNEYITPAQKTISYFIITKDN------FVPK 228 Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 + + ++ + I R + TK+EK Sbjct: 229 NKISEDEIKAYYQAHKELFKDFDNNAKSTIQKIIQNRHALEQFNEYTQNIDSIKYTKLEK 288 Query: 300 HE 301 Sbjct: 289 QF 290 >gi|89256253|ref|YP_513615.1| hypothetical protein FTL_0896 [Francisella tularensis subsp. holarctica LVS] gi|254367592|ref|ZP_04983613.1| hypothetical protein FTHG_00855 [Francisella tularensis subsp. holarctica 257] gi|89144084|emb|CAJ79335.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica LVS] gi|134253403|gb|EBA52497.1| hypothetical protein FTHG_00855 [Francisella tularensis subsp. holarctica 257] Length = 476 Score = 41.2 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 15/162 (9%), Positives = 43/162 (26%), Gaps = 7/162 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI-RTTINGEVITDGDISKR 59 M L + + IF I + + + SSR + I+ + Sbjct: 1 MLQSFNDRLKGPFTWIVVISISFIFVISGMTFFFTNIGSSRAYVAKVGDNEISSQQFQQY 60 Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 + E ++ + ++I + L + ++ I + + + Sbjct: 61 VQ----SATTEEQKRAILSQMIDQYLILADAQRHDIVVSKLALQSAIFTNPMFF--DKDG 114 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 S + + Q + ++ + + Sbjct: 115 KFSAEKLKQVVAYLGGMDKLEQILAQNIQATIIPKTIVDTSI 156 >gi|302325773|gb|ADL24974.1| PPIC-type PPIASE domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 671 Score = 41.2 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 10/229 (4%), Positives = 38/229 (16%), Gaps = 9/229 (3%) Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 + D+ +R + + ++ + AR Sbjct: 167 SQEDLIQRSQAYLASLPKFLTDTTFNKADYDAWIETPAAYRWSAMLSLEDEMKNNSIPAR 226 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 + + + + + + Sbjct: 227 QLQTLVGASVHPTSLEAKWSVERRMTDYELQVAVAPSSAFVVDSNSVDSVMVAGYFNAHI 286 Query: 172 NIT-----VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + ++ ++ + + + + Sbjct: 287 DSFFVQKDAAQFQYVSIPVEATAGDDASIREYAMTLYYQLTDSSSTTTFEDMARVSSEDP 346 Query: 227 -HDVSIGKA--QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G ++ F+ + P +Q G I Sbjct: 347 GSAEKGGILSEDFVGRGSYVKPFEEAAFALDSGKISEPVRSQFGYHIIK 395 Score = 40.4 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 20/183 (10%), Positives = 52/183 (28%), Gaps = 11/183 (6%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + T +++ K + F I + + S +N I+ D R+ ++ Sbjct: 29 MLTWINEKAKWVIVIFAAGIAIGLLAMDRVPDQGRSYPIGIVNDTKISYTDFDSRVKMIV 88 Query: 65 LQK---------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH--ARNT 113 + +L + + L ++ EK+ ++ + F ++ A Sbjct: 89 QNQYQNQHLDDEQYSQLRAQVFSSFVRQALFAEQYEKAELSASVAELKNEFKRNSDAVRA 148 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 L E + Q + Q+ + K + + + Sbjct: 149 RLVQEAQARLYAIQQQATSQEDLIQRSQAYLASLPKFLTDTTFNKADYDAWIETPAAYRW 208 Query: 174 TVR 176 + Sbjct: 209 SAM 211 >gi|291525353|emb|CBK90940.1| PPIC-type PPIASE domain [Eubacterium rectale DSM 17629] gi|291527060|emb|CBK92646.1| PPIC-type PPIASE domain [Eubacterium rectale M104/1] Length = 329 Score = 41.2 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 27/249 (10%), Positives = 64/249 (25%), Gaps = 12/249 (4%) Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 ++ + LI K T + V+ E + Sbjct: 44 DNMKCDKTEALIYLANYKNLYGTMYDVNLLETDDASNVEKYIRDVTVDELTRIYCMVSIA 103 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 +S K + + A+ M++ + + + S+ Sbjct: 104 KQKKITLTDKEKSSVSKAAKEYYDSLNEAEKKFTKADLSDMESAYEHYAIAQKLYNSLSK 163 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNK----------LEKFASKIHDVSIGKAQYLLE 239 R+ ++ ++ + + AS + S + Y + Sbjct: 164 GVDTEVSDEDARVIHIQKIFVKSKESADSVSQKLLSKEDFAAVASGSSEDSQTEL-YAAK 222 Query: 240 SDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 L + + + + T++ T G +I K D K + + + Sbjct: 223 GTLPQEVEAVAFELGDGETSDMISTDDGYYFIKCISKLDREKTEQNKVTILQKRQQEQFN 282 Query: 299 KHEAEYVKK 307 +VKK Sbjct: 283 DDYEHFVKK 291 >gi|261417144|ref|YP_003250827.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373600|gb|ACX76345.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 643 Score = 41.2 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 10/229 (4%), Positives = 38/229 (16%), Gaps = 9/229 (3%) Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 + D+ +R + + ++ + AR Sbjct: 139 SQEDLIQRSQAYLASLPKFLTDTTFNKADYDAWIETPAAYRWSAMLSLEDEMKNNSIPAR 198 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 + + + + + + Sbjct: 199 QLQTLVGASVHPTSLEAKWSVERRMTDYELQVAVAPSSAFVVDSNSVDSVMVAGYFNAHI 258 Query: 172 NIT-----VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + ++ ++ + + + + Sbjct: 259 DSFFVQKDAAQFQYVSIPVEATAGDDASIREYAMTLYYQLTDSSSTTTFEDMARVSSEDP 318 Query: 227 -HDVSIGKA--QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271 G ++ F+ + P +Q G I Sbjct: 319 GSAEKGGILSEDFVGRGSYVKPFEEAAFALDSGKISEPVRSQFGYHIIK 367 Score = 40.4 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 20/183 (10%), Positives = 52/183 (28%), Gaps = 11/183 (6%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + T +++ K + F I + + S +N I+ D R+ ++ Sbjct: 1 MLTWINEKAKWVIVIFAAGIAIGLLAMDRVPDQGRSYPIGIVNDTKISYTDFDSRVKMIV 60 Query: 65 LQK---------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH--ARNT 113 + +L + + L ++ EK+ ++ + F ++ A Sbjct: 61 QNQYQNQHLDDEQYSQLRAQVFSSFVRQALFAEQYEKAELSASVAELKNEFKRNSDAVRA 120 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 L E + Q + Q+ + K + + + Sbjct: 121 RLVQEAQARLYAIQQQATSQEDLIQRSQAYLASLPKFLTDTTFNKADYDAWIETPAAYRW 180 Query: 174 TVR 176 + Sbjct: 181 SAM 183 >gi|108762060|ref|YP_631492.1| hypothetical protein MXAN_3293 [Myxococcus xanthus DK 1622] gi|108465940|gb|ABF91125.1| conserved hypothetical protein [Myxococcus xanthus DK 1622] Length = 236 Score = 41.2 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 17/165 (10%), Positives = 54/165 (32%), Gaps = 9/165 (5%) Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---------NGELE 73 + + ++ ++ I G+V+T ++ + LQ+ + + Sbjct: 27 AVGAAATPPATVEGRVADQVVAIIEGQVLTLSELRFEARVALLQRGGVQALELPLDEDTL 86 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A++ +I + ++ ++ V + FL + + Sbjct: 87 RGALELIINQRVQVLNADRLQAFPAEPAEVQARVDAFQAVLGGEAALKRFLSRHDVDVQG 146 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 ++ LA ++ + L+ E E+ + ++ + Y Sbjct: 147 LERVLARGLRAERILDSRIRLRAQVGETEVRRHFEQNADEYPEGY 191 >gi|332678352|gb|AEE87481.1| Peptidyl-prolyl cis-trans isomerase ppiD [Francisella cf. novicida Fx1] Length = 477 Score = 41.2 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 30/302 (9%), Positives = 76/302 (25%), Gaps = 13/302 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI-RTTINGEVITDGDISKR 59 M L + + IF I + + + SSR + I+ + Sbjct: 1 MLQSFNDRLKGPFTWIVVISISFIFVISGMTFFFTNIGSSRAYVAKVGDNEISSQQFQQY 60 Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 E ++ + ++I + L + ++ I + + + Sbjct: 61 AQ----SATTEEQKRAILSQMIDQYLILVDAQRHDIVVSKLALQSAIFTNPMFF--DKDG 114 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 S + + Q + ++ + + + + + +I Sbjct: 115 KFSAEKLKQVVAYLGGMDKLEQILAQNIQATIIPKTIVDTSIVTDYDTKLLNSIYSVNKY 174 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 I + S D K Q + Q + + K + D ++ + Sbjct: 175 IDYLKVSPTDFKSQIKPSQQDLQSYYDSHKNEYITPAQKTISYFIITKDN------FVPK 228 Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 + + ++ + I R + TK+EK Sbjct: 229 NKISEDEIKAYYQAHKELFKDFDNNAKSTIQKIIQNRHALEQFNEYTQNIDSIKYTKLEK 288 Query: 300 HE 301 Sbjct: 289 QF 290 >gi|319948816|ref|ZP_08022932.1| SurA domain-containing protein [Dietzia cinnamea P4] gi|319437523|gb|EFV92527.1| SurA domain-containing protein [Dietzia cinnamea P4] Length = 246 Score = 41.2 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 23/191 (12%), Positives = 59/191 (30%), Gaps = 12/191 (6%) Query: 43 RTTINGEVITDGD----ISKRIALLKLQKI-------NGELEKIAVQELIVETLKKQEIE 91 +NG I+ + + + +Q +L+++ LI L QE Sbjct: 52 VAEVNGTEISRDEFLSVFENQYQQMSMQAQMSGQPVDEAQLKELTTDGLIGTELLTQEAG 111 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151 GI + A +S ++F + QG+ + Q ++ ++ Sbjct: 112 TRGIEVSDEEIQAELAVFAERNQVSTDEFVEAMGGQGLDRAAVLDQIDKQLRVQKLITDE 171 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + ++ E E+ A +++ +P + ++ + E + Sbjct: 172 YG-EFEVTEAEVQAAYEQVAQQQAMSGGGEAGGGGLPPLEQVRGQAEEQVRAEQEAGAME 230 Query: 212 LPKDCNKLEKF 222 + + Sbjct: 231 ELSQKLRADAD 241 >gi|282866310|ref|ZP_06275356.1| hypothetical protein SACTEDRAFT_5901 [Streptomyces sp. ACTE] gi|282558896|gb|EFB64452.1| hypothetical protein SACTEDRAFT_5901 [Streptomyces sp. ACTE] Length = 218 Score = 41.2 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 17/148 (11%), Positives = 44/148 (29%), Gaps = 11/148 (7%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 + P++S + GE I + R A ++ + E Sbjct: 5 RRTALAVSAATLVAAPLLSACGGEAHPGAAAVVGGERIEVSAVQARTADVRSAQEASEQS 64 Query: 74 KIA-----------VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 + + LI + + + +G++ V A +G + Sbjct: 65 EQLVKKSGQLTRAKLHSLIFGRVLDRAAKDAGVSVSRKEVQQVRTAAAAQSGGDEGLRTV 124 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 L+++ + ++ L + P + + Sbjct: 125 MLEQRWVAPGEIEEDLRKEVQLPKLAQA 152 >gi|115314710|ref|YP_763433.1| hypothetical protein FTH_0881 [Francisella tularensis subsp. holarctica OSU18] gi|156502314|ref|YP_001428379.1| hypothetical protein FTA_0947 [Francisella tularensis subsp. holarctica FTNF002-00] gi|254369242|ref|ZP_04985254.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] gi|290953593|ref|ZP_06558214.1| peptidyl-prolyl cis-trans isomerase D [Francisella tularensis subsp. holarctica URFT1] gi|295313094|ref|ZP_06803784.1| peptidyl-prolyl cis-trans isomerase D [Francisella tularensis subsp. holarctica URFT1] gi|115129609|gb|ABI82796.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] gi|156252917|gb|ABU61423.1| hypothetical protein FTA_0947 [Francisella tularensis subsp. holarctica FTNF002-00] gi|157122192|gb|EDO66332.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] Length = 477 Score = 41.2 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 15/162 (9%), Positives = 43/162 (26%), Gaps = 7/162 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI-RTTINGEVITDGDISKR 59 M L + + IF I + + + SSR + I+ + Sbjct: 1 MLQSFNDRLKGPFTWIVVISISFIFVISGMTFFFTNIGSSRAYVAKVGDNEISSQQFQQY 60 Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 + E ++ + ++I + L + ++ I + + + Sbjct: 61 VQ----SATTEEQKRAILSQMIDQYLILADAQRHDIVVSKLALQSAIFTNPMFF--DKDG 114 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 S + + Q + ++ + + Sbjct: 115 KFSAEKLKQVVAYLGGMDKLEQILAQNIQATIIPKTIVDTSI 156 >gi|313111450|ref|ZP_07797252.1| putative peptidyl-prolyl isomerase [Pseudomonas aeruginosa 39016] gi|310883754|gb|EFQ42348.1| putative peptidyl-prolyl isomerase [Pseudomonas aeruginosa 39016] Length = 428 Score = 41.2 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 14/171 (8%), Positives = 48/171 (28%), Gaps = 14/171 (8%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + K + + E + + V + + + + + ++ + E R Sbjct: 265 RELAGKVSDKDAEAYYRRNLERYRNVAQVQAAHIRLADQASADKVYAELRNGLAFDEAVR 324 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLE--SDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 A G + L + L + + + P Sbjct: 325 R---------YSLADDRDRDPPGDLGLIRPQDGRLDLLRKTALIQKADTVSQPMRIDGAF 375 Query: 268 EYIAI---CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 E + + D++ + +++ ++ ++ ++ L + A + Sbjct: 376 EIVRVRSREDRQLPLDDRSVRFEVNQAVAREQLAAQFETRLRNLLAGARVE 426 >gi|188586230|ref|YP_001917775.1| SurA domain [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350917|gb|ACB85187.1| SurA domain [Natranaerobius thermophilus JW/NM-WN-LF] Length = 255 Score = 41.2 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 60/181 (33%), Gaps = 27/181 (14%) Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSW--------------AMSSRIRTTINGEVITDGDI 56 KL+ T LII ++ + + +NGE I ++ Sbjct: 2 KLRKLILTALSLIILVTFAACGEEAPKDEAEPKESQDVEGEIEQDVVAVVNGEEIMYEEL 61 Query: 57 SKRIALLKLQKI-------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 S+ L Q EL +A++ELI TL QE E G+T D V Sbjct: 62 SQTKEQLAFQMQMPIDQLEEQDDEMMNELRDMAMEELIGGTLLAQEAEAEGLTPDEEEVE 121 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 Q+ G S E+ L ++ + ++ + + +++ + E Sbjct: 122 KNLEQYTAQFGESEEEIEENLAQEDLTMEDLREDVTQSLMITEIMDEKIEVDEDVDVSEE 181 Query: 164 P 164 Sbjct: 182 E 182 >gi|116053747|ref|YP_788182.1| putative peptidyl-prolyl isomerase [Pseudomonas aeruginosa UCBPP-PA14] gi|115588968|gb|ABJ14983.1| putative peptidyl-prolyl isomerase [Pseudomonas aeruginosa UCBPP-PA14] Length = 428 Score = 41.2 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 14/171 (8%), Positives = 48/171 (28%), Gaps = 14/171 (8%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + K + + E + + V + + + + + ++ + E R Sbjct: 265 RELAGKVSDKDAEAYYRRNLERYRNVAQVQAAHIRLADQASADKVYAELRNGLAFDEAVR 324 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLE--SDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 A G + L + L + + + P Sbjct: 325 R---------YSLADDRDRDPPGDLGLIRPQDGRLDLLRKTALIQKADTVSQPMRIDGAF 375 Query: 268 EYIAI---CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 E + + D++ + +++ ++ ++ ++ L + A + Sbjct: 376 EIVRVRSREDRQLPLDDRSVRFEVNQAVAREQLAAQFETRLRNLLAGARVE 426 >gi|229546514|ref|ZP_04435239.1| peptidylprolyl isomerase [Enterococcus faecalis TX1322] gi|307289957|ref|ZP_07569886.1| putative foldase protein PrsA [Enterococcus faecalis TX0411] gi|229308414|gb|EEN74401.1| peptidylprolyl isomerase [Enterococcus faecalis TX1322] gi|306499023|gb|EFM68512.1| putative foldase protein PrsA [Enterococcus faecalis TX0411] gi|323479869|gb|ADX79308.1| Peptidyl-prolyl cis-trans isomerase PPIASE domain protein [Enterococcus faecalis 62] Length = 342 Score = 41.2 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 28/312 (8%), Positives = 74/312 (23%), Gaps = 39/312 (12%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + + S + + S+ T+ G IT D +I + Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A ++++ + +++ D ++ E + Sbjct: 54 AFSQMVIYKVFEEKYGDKVTDKD-------IQKNFDEAKEQVEAQGGKFSDALKQAGLTE 106 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + ++ + I + Sbjct: 107 KTFKKQLKQRAAYDAGLKAHLKITDEDLKTAW--------ASFHPEVEAQIIQVASEDDA 158 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKS 253 V+K E EK GK ++ ++ P + K Sbjct: 159 KAVKK------EITDGGDFTKIAKEKSTDAATKKDGGKIKFDSQATTIPAEVKEAAFKLK 212 Query: 254 QNNTTNPYVTQK------GVEYIAICDKRDLGGE-IALKAYLSAQNTPTKI--EKHEAEY 304 + P + + + G + + + TK+ + ++ Sbjct: 213 DGEVSEPIAATNMQTYQTTYYVVKMTKNKAKGNDMKPYEKEIKKIAEETKLADQTFVSKV 272 Query: 305 VKKLRSNAIIHY 316 + A + Sbjct: 273 ISDELKAANVKI 284 >gi|146329199|ref|YP_001209808.1| peptidylprolyl cis-trans isomerase [Dichelobacter nodosus VCS1703A] gi|146232669|gb|ABQ13647.1| peptidylprolyl cis-trans isomerase [Dichelobacter nodosus VCS1703A] Length = 621 Score = 41.2 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 51/152 (33%), Gaps = 8/152 (5%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M V + + + + + +NG I D ++ + Sbjct: 21 MADAVSEKKGNRFTYALVGVAGLGVVFIGVPILTPKYQPAT-VAQVNGISIEQHDFNRMV 79 Query: 61 ALLKLQK---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 + L+ + + E+ ++A+Q++I ETL +Q +SG + + Sbjct: 80 SHLQQRLTNIPSKEVRELALQQIINETLLRQHALQSGYLASRQDLYTAVKAQFGDN---- 135 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 E + +L Q I +++ L + Sbjct: 136 ETYEKWLKSQRITAQNYEAGLYHDLTVSQYYQ 167 >gi|95929247|ref|ZP_01311991.1| hypothetical protein Dace_1864 [Desulfuromonas acetoxidans DSM 684] gi|95134745|gb|EAT16400.1| hypothetical protein Dace_1864 [Desulfuromonas acetoxidans DSM 684] Length = 539 Score = 41.2 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 27/262 (10%), Positives = 77/262 (29%), Gaps = 8/262 (3%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 + + + ++ + A+ T+ Q + K+ ++ + + Sbjct: 264 EQGMKRIHEDGPEEDVAEAAMITFPDFTITGQILYKNALSHYQRFGGKEMKDTSFEEIVQ 323 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + + Y + LE ++ ++ + + Sbjct: 324 RVANDIVAQSLTSMEALNRHYESKPPFQSVYFFYQRHRLIRELESKLILPYTQVSDEELS 383 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 Y +++ + K A + R L + + + + + + + Sbjct: 384 HYYNEHREDYAYPVRVRYASVETRNEKMALKLREDLRQGADFYQTLS--PLSPAGIETKT 441 Query: 237 LLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA----QN 292 + L P+ Q+L+ + Q ++ +I + + + + + Q Sbjct: 442 TPLAHLIPEMQDLIDRLQPGQSDMLEVDGYFHFIRLIE--EPKVDYKPFDQIRDALKAQL 499 Query: 293 TPTKIEKHEAEYVKKLRSNAII 314 T K + AE V +LR I Sbjct: 500 TQAKFSQRRAELVAQLRQRTTI 521 >gi|326391780|ref|ZP_08213299.1| hypothetical protein TheetDRAFT_2540 [Thermoanaerobacter ethanolicus JW 200] gi|325992168|gb|EGD50641.1| hypothetical protein TheetDRAFT_2540 [Thermoanaerobacter ethanolicus JW 200] Length = 238 Score = 40.8 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 17/152 (11%), Positives = 44/152 (28%), Gaps = 9/152 (5%) Query: 41 RIRTTINGEVITDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 + +NG I + + R L L ++ +Q+LI E +++ K I Sbjct: 65 DVIAEVNGIPIYNNEFELRKGLTLASGVQTDNIDDYILQKLIKEKVQEYLANKYNIKVSQ 124 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL--------AIQSIWPDVVKND 151 N +N + + + E + +Y ++ + + Sbjct: 125 NEINAYIEKEKKEFNEYPEAKKKLDELISTSGMTEDEYWNTYEKYNAKRILLFSKLYNSI 184 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + ++ + Y+ + Sbjct: 185 IEEGIKSGRLKKAEEMTNDVQNEYKRYVDSII 216 >gi|316976102|gb|EFV59445.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Trichinella spiralis] Length = 422 Score = 40.8 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 11/87 (12%), Positives = 22/87 (25%), Gaps = 13/87 (14%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI-----GKAQYLLESDLHPQFQNLLK 251 + +A E K ++ G +++ + FQ+ Sbjct: 60 EKLSKANEAMEKLKAGEKFNIVASSYSED-KARQGCIVLQGDLGWMVRGSMVGPFQDAAF 118 Query: 252 KSQNNTT-------NPYVTQKGVEYIA 271 +T P T+ G I Sbjct: 119 GLPISTVDKPVFTDPPVKTKFGYHIIM 145 >gi|149203720|ref|ZP_01880689.1| hypothetical protein RTM1035_06628 [Roseovarius sp. TM1035] gi|149142837|gb|EDM30879.1| hypothetical protein RTM1035_06628 [Roseovarius sp. TM1035] Length = 614 Score = 40.8 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 21/289 (7%), Positives = 56/289 (19%), Gaps = 38/289 (13%) Query: 56 ISKRIALLKLQKINGELEKIAVQ-------ELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + L L + L + + + + + +S + Sbjct: 93 LEHEADRLGLSIGDENLREQILDIPSFQGLDGSFDREAYRFALDQAGLNESQFEENIRAE 152 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG-NLEMEIPANK 167 A +A + + + + E ++ Sbjct: 153 TASTLVQAAALAGLQTPSTYMDTMMTYLAERRSLAFAVLDRAALQSGLPVPSEDDLKTYH 212 Query: 168 QKMKNITVR---------EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 Q +L S+ ++ + +R + RL + Sbjct: 213 QGHLPDFTTPETKTITFAWVTPAMILDSVEVDEAALREAYAERETEFNMPERRLVERLVF 272 Query: 219 LEKFA--SKIHDVSIG-----------------KAQYLLESDLHPQFQNLLKKSQNNTTN 259 + A + G + DL + Sbjct: 273 ADSAAATRARTRIDDGIALEMLVSERGLDMADIDMGDVSREDLGAAADPVFSAQAGEVVG 332 Query: 260 PYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 P T G + + + L + + + + Sbjct: 333 PIDTNLGPALFRVNAVLAAQITTFEEAEPRLREELAADRARRVIEAKID 381 >gi|296446388|ref|ZP_06888333.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylosinus trichosporium OB3b] gi|296256161|gb|EFH03243.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylosinus trichosporium OB3b] Length = 635 Score = 40.8 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 35/391 (8%), Positives = 75/391 (19%), Gaps = 89/391 (22%) Query: 1 MTSKVFTSLSDFIKLLTTY----FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI 56 M + + I + F+ + F + I + R + IT Sbjct: 1 MLEGLRIASQHRIGRVILGIVMGFIALSFAVWGIGDVFRGFSTKR-LAKVGSGEITVEAY 59 Query: 57 SKRIALLKLQKINGE-------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 + L++ +Q +I E Q+ G+ V Sbjct: 60 RGAYQNELRRLQQRARRAITNEEARRYGLDEQVLQRMITELTLDQKARALGLAIGDPDVL 119 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY------- 156 G + + S + + ++ + V K Sbjct: 120 KLVRDENVFKGPTGKFDSDRFKQILRDAGYTERSFLAEQKSGYVRKELTDSVVGAMEPPQ 179 Query: 157 ------------------------------GNLEMEIPANKQKMKNITVREYLIRTVLFS 186 E E+ + + + R V+ + Sbjct: 180 LVLEALHRFRNEARDVDYFELPAAAAGEIAAPSEEELKKYFEDREQSFRAKEYRRLVILA 239 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCN-----------KLEKFASKIHDV-SIG-- 232 L V + ++ + + A G Sbjct: 240 ATPASLAKPQEVSEEEARKLYDEVKTKRYGTAEKRHLRQLLFAAKDEADAALKRLEGGLS 299 Query: 233 ---------------KAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 L DL + + P T G + I Sbjct: 300 FEALATERKLATKDIDLGLLEAKDLGEIKLSDKVFAPEKPGFVGPVQTAFGYAILEIEKI 359 Query: 276 RD---LGGEIALKAYLSAQNTPTKIEKHEAE 303 + L + + + Sbjct: 360 VPSVVTRSFEQTRDELRGEIARERAAPQVQK 390 >gi|237744140|ref|ZP_04574621.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. 7_1] gi|289765704|ref|ZP_06525082.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. D11] gi|229431369|gb|EEO41581.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. 7_1] gi|289717259|gb|EFD81271.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. D11] Length = 356 Score = 40.8 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 31/260 (11%), Positives = 71/260 (27%), Gaps = 8/260 (3%) Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 +I L + N + +E T + I + A+ Sbjct: 2 QIKDLAPEYENLVEKTAYEEEGFNITNLDLARATANIMLGQKISKEDAEKQAKEMISRQI 61 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + ++G+ N ++ + + + E+ K+ Sbjct: 62 KMAKIAKEKGVKVNENLDSISQFQDYYIGLAEKVRDDVKPTDDELLKFFNANKSKYSIPA 121 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 L I + + K + S L K + ++ + Sbjct: 122 TADAKLVFISVKSAKEDDDLAKEKAEKLLSELTPENFTEKGKSLSNNQDIIY-QDLGTFG 180 Query: 239 ESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 + + +F+ L+ +N T+ G + K++ + ++ P Sbjct: 181 TTAMVKEFEEALRDVPSNTVVNKVIKTKFGYHIAYV--KKNDNNQQWEVEHILIVPYP-- 236 Query: 297 IEKHEAEYVKKLRS-NAIIH 315 EK E ++KL A I Sbjct: 237 SEKTVTEKLEKLNKVKAEIE 256 >gi|218888773|ref|YP_002437637.1| putative peptidyl-prolyl isomerase [Pseudomonas aeruginosa LESB58] gi|218768996|emb|CAW24754.1| putative peptidyl-prolyl isomerase [Pseudomonas aeruginosa LESB58] Length = 428 Score = 40.8 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 14/171 (8%), Positives = 48/171 (28%), Gaps = 14/171 (8%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + K + + E + + V + + + + + ++ + E R Sbjct: 265 RELAGKVSDKDAEAYYRRNLERYRNVAQVQAAHIRLADQASADKVYAELRGGLAFDEAVR 324 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLE--SDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 A G + L + L + + + P Sbjct: 325 R---------YSLADDRDRDPPGDLGLIRPQDGRLDLLRKTALIQKADTVSQPMRIDGAF 375 Query: 268 EYIAICDKRDLG---GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 E + + ++D + +++ ++ ++ ++ L + A + Sbjct: 376 EIVRVRSRKDRQLPLDDRSVRFEVNQAVAREQLAAQFETRLRNLLAGARVE 426 >gi|208779446|ref|ZP_03246792.1| numod1 domain family protein [Francisella novicida FTG] gi|208745246|gb|EDZ91544.1| numod1 domain family protein [Francisella novicida FTG] Length = 477 Score = 40.8 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 15/160 (9%), Positives = 41/160 (25%), Gaps = 7/160 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI-RTTINGEVITDGDISKR 59 M L + + IF I + + + SSR + I+ + Sbjct: 1 MLQSFNDRLKGPFTWIVVISISFIFVISGMTFFFTNIGSSRAYVAKVGDNEISSQQFQQY 60 Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 E ++ + ++I + L + ++ I + + + Sbjct: 61 AQ----SATTEEQKRAILSQMIDQYLILADAQRHDIVVSKLALQSAIFT--NSMFFDKDG 114 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159 S + + Q + ++ + Sbjct: 115 KFSAEKLKQVVAYLGGMDKLEQILAQNIQATIIPKTIVDT 154 >gi|218680686|ref|ZP_03528583.1| peptidyl-prolyl cis-trans isomerase D signal peptide protein [Rhizobium etli CIAT 894] Length = 194 Score = 40.8 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 14/166 (8%), Positives = 41/166 (24%), Gaps = 13/166 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56 M + + ++ L ++ F I + +S T+ + + + Sbjct: 1 MFHILRRAAQTWVAKLLMLLLVASFGIWGVSRSLITGGNSTTVVTVGDQHVDVNEFHLAY 60 Query: 57 ---------SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + L Q +E+ + +L+ Q E + + + Sbjct: 61 QRQVASLSQQFGMRLTPEQARAFGVEQQVLAQLVAGASLDQLAEDMNLGLSEDRLAQLIA 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 ++ + + N + + V Sbjct: 121 DDPAFKAVNGKFDRELFISRLRNANIRQDDYIKERSKVAVRSQVVD 166 >gi|167392097|ref|XP_001740015.1| peptidyl-prolyl cis-trans isomerase [Entamoeba dispar SAW760] gi|165896055|gb|EDR23595.1| peptidyl-prolyl cis-trans isomerase, putative [Entamoeba dispar SAW760] Length = 116 Score = 40.8 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 20/86 (23%) Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + +QK E+ + G +E P Sbjct: 22 WRETTITRTKEQAIQKLKVLREQIVKGKKDFRQTAIIESDCSSSTQGGLLLGTIEQYQKP 81 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYI 270 LK ++ T GV I Sbjct: 82 FADAYLKLKVGEISDIIETDSGVHII 107 >gi|255322620|ref|ZP_05363764.1| conserved hypothetical protein [Campylobacter showae RM3277] gi|255300181|gb|EET79454.1| conserved hypothetical protein [Campylobacter showae RM3277] Length = 487 Score = 40.8 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 25/283 (8%), Positives = 71/283 (25%), Gaps = 28/283 (9%) Query: 46 INGEVITDG-------------DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEK 92 +N E I D LK + + +++ +I+ + + Sbjct: 111 VNDEDIVKYIIADQNFHSNGKFDKELYKNTLKRARTTESEYEESLKNVILLDKLRHALNL 170 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS--IWPDVVKN 150 D + + F+ + + E + + + + + + Sbjct: 171 PANAQDIDMLTASFLMQDKISIKVVEANADEIKIDEDALKKLWEEHKNEYKTMTEFKLDT 230 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 F+ + + +N + + + + K+ K Sbjct: 231 KFIPAISSDANTNELTEFYNENKNEYKGSDDKIKEFEAVKDEVLKDYNLKQTKKVALEEY 290 Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI 270 K K + + + + L L + +T P+ + G + Sbjct: 291 LKIKKDEKQADVSVSTFEDN---------ASLP--MDELKLAKKGDTLKPFEYEDGYMIV 339 Query: 271 AICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + + K + K ++ K+L Sbjct: 340 KVKEIVAPRVMSFDEAKEQILELYKEQKTKEIVEAKAKELLEK 382 >gi|120436844|ref|YP_862530.1| hypothetical protein GFO_2507 [Gramella forsetii KT0803] gi|117578994|emb|CAL67463.1| conserved hypothetical protein, secreted [Gramella forsetii KT0803] Length = 292 Score = 40.8 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 34/318 (10%), Positives = 79/318 (24%), Gaps = 42/318 (13%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K+ K + ++ + +V Y + +I +N + + DI I Sbjct: 1 MLKKL-----ILKKYFLGFTLIFLSLLVLSCEYFEQSDDRKIVVRVNDSYLYEEDIVALI 55 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 + + + V+ + + A L Sbjct: 56 NEATSPEDSSII-----------------------------VSNYITRWATQQLLIDRAE 86 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + Q + + + KN Sbjct: 87 LNLPETQQNEFDGLVNNYRNELYTNAYTDAVVSRDLDTSLNTNEVEEYYEKNKENFILNE 146 Query: 181 ---RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 + ++ N +K + EE + L + + +A K+ Y Sbjct: 147 DLVKLRYINLAKNSNNLDEIKKKLNRFNEEDQQELETMALQFKNYAMNDSVWIKTKSVYD 206 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD---KRDLGGEIALKAYLSAQNTP 294 + L + ++ L K N V + + D + + A + Sbjct: 207 KITPLSVEDRSSLLKKSNFME--LQDSLNVYLVYVNDVLSRNEQAPLEYASATIREILLN 264 Query: 295 TKIEKHEAEYVKKLRSNA 312 + + E K + +A Sbjct: 265 KRKQALIKELEKDITKDA 282 >gi|256854455|ref|ZP_05559819.1| rotamase [Enterococcus faecalis T8] gi|256710015|gb|EEU25059.1| rotamase [Enterococcus faecalis T8] gi|315030576|gb|EFT42508.1| putative foldase protein PrsA [Enterococcus faecalis TX4000] Length = 342 Score = 40.8 bits (93), Expect = 0.28, Method: Composition-based stats. Identities = 28/312 (8%), Positives = 75/312 (24%), Gaps = 39/312 (12%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + +L + + S + + S+ T+ G IT D +I + Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A ++++ + +++ D ++ E + + Sbjct: 54 AFSQMVIYKVFEEKYGDKVTDKD-------IQKNFDEAKEQVEAQGGKFSDALKQASLTE 106 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + Q + ++ + I + Sbjct: 107 KTFKKQLKQRAAYDAGLKAHLKITDEDLKTAW--------ASFHPEVEAQIIQVASEDDA 158 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLKKS 253 V+K E EK GK ++ ++ P + K Sbjct: 159 KAVKK------EITDGGDFTKIAKEKSTDAATKKDGGKIKFDSQATTIPAEVKEAAFKLK 212 Query: 254 QNNTTNPYVTQK------GVEYIAICDKRDLGGE-IALKAYLSAQNTPTKI--EKHEAEY 304 + P + + + G + + + TK+ + ++ Sbjct: 213 DGEVSEPIAATNMQTYQTTYYVVKMTKNKAKGNDMKPYEKEIKKIAEETKLADQTFVSKV 272 Query: 305 VKKLRSNAIIHY 316 + A + Sbjct: 273 ISDELKAANVKI 284 >gi|86138848|ref|ZP_01057420.1| hypothetical protein MED193_03732 [Roseobacter sp. MED193] gi|85824495|gb|EAQ44698.1| hypothetical protein MED193_03732 [Roseobacter sp. MED193] Length = 614 Score = 40.8 bits (93), Expect = 0.28, Method: Composition-based stats. Identities = 19/235 (8%), Positives = 59/235 (25%), Gaps = 19/235 (8%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--L 65 LS+ + +++ V++ S + + E +T + + + + L Sbjct: 7 KLSNTFVWILMGLLIVGLAGFGAVNFSSSMSA---VALVGEEEVTVDEYLREMQREQRAL 63 Query: 66 QKINGE-----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 Q G+ L++ + LI E++ GI+ + + + Sbjct: 64 QAQGGQALSLSQMAAFGLDQAVLGRLISIAAIDNEVKNLGISVGDDNLRQELAEIPAFQD 123 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD---VVKNDFMLKYGNLEMEIPANKQKMK 171 S N + +V+ ++ + + Sbjct: 124 PSGNFDRQTYSFALQNANLNESDFEADLRRESARTLVQGAIVVGAKMPDTLTKTLTSYIG 183 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 Y+ + + + + + + + + Sbjct: 184 ARRSFSYVPFSPDQISLIQVVPEDAVLMAFYEANADDFTLPETKRITYARLSPDM 238 >gi|256027747|ref|ZP_05441581.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. D11] Length = 563 Score = 40.8 bits (93), Expect = 0.28, Method: Composition-based stats. Identities = 31/262 (11%), Positives = 71/262 (27%), Gaps = 8/262 (3%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +I L + N + +E T + I + A+ Sbjct: 207 EMQIKDLAPEYENLVEKTAYEEEGFNITNLDLARATANIMLGQKISKEDAEKQAKEMISR 266 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + ++G+ N ++ + + + E+ K+ Sbjct: 267 QIKMAKIAKEKGVKVNENLDSISQFQDYYIGLAEKVRDDVKPTDDELLKFFNANKSKYSI 326 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 L I + + K + S L K + ++ + Sbjct: 327 PATADAKLVFISVKSAKEDDDLAKEKAEKLLSELTPENFTEKGKSLSNNQDIIY-QDLGT 385 Query: 237 LLESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 + + +F+ L+ +N T+ G + K++ + ++ P Sbjct: 386 FGTTAMVKEFEEALRDVPSNTVVNKVIKTKFGYHIAYV--KKNDNNQQWEVEHILIVPYP 443 Query: 295 TKIEKHEAEYVKKLRS-NAIIH 315 EK E ++KL A I Sbjct: 444 --SEKTVTEKLEKLNKVKAEIE 463 >gi|188586655|ref|YP_001918200.1| SurA domain [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351342|gb|ACB85612.1| SurA domain [Natranaerobius thermophilus JW/NM-WN-LF] Length = 232 Score = 40.8 bits (93), Expect = 0.28, Method: Composition-based stats. Identities = 23/232 (9%), Positives = 73/232 (31%), Gaps = 15/232 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---- 68 + + + + ++ ++ + + +N + + + D+ + L + Sbjct: 1 MSIKKVVLIALSALLLFVL--TACGNDDEVVAIVNDQELKEEDLDRFKQQLIQMRQLYGM 58 Query: 69 ---------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 EL+K AV+E++ ET+ Q+ E+ GIT D V + Sbjct: 59 PVDEEDEEQMDELQKEAVEEMVTETVLLQKAEEEGITVDEELVENELEAIENQFESDEQM 118 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + ++ + I + ++EI + + + + Sbjct: 119 EEALDMYGLTSEDLESEIRNSYMIEELITGLVDEDDISQDDIEISEEELRERYEHEKSRA 178 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 + + +++ ++ E + ++ + + ++ I Sbjct: 179 TQNGEDEEDFPEFEDRKEELEQQLIDEAKQDKMQDEIINKIDELKEESEIEI 230 >gi|212694486|ref|ZP_03302614.1| hypothetical protein BACDOR_04014 [Bacteroides dorei DSM 17855] gi|237711177|ref|ZP_04541658.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 9_1_42FAA] gi|237727542|ref|ZP_04558023.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D4] gi|265750767|ref|ZP_06086830.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_33FAA] gi|212662987|gb|EEB23561.1| hypothetical protein BACDOR_04014 [Bacteroides dorei DSM 17855] gi|229434398|gb|EEO44475.1| peptidyl-prolyl cis-trans isomerase [Bacteroides dorei 5_1_36/D4] gi|229455021|gb|EEO60742.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 9_1_42FAA] gi|263237663|gb|EEZ23113.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_33FAA] Length = 710 Score = 40.8 bits (93), Expect = 0.28, Method: Composition-based stats. Identities = 27/271 (9%), Positives = 66/271 (24%), Gaps = 6/271 (2%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + +T+ I + +L++ +K V + +E S V Sbjct: 435 KELTNLQIGQANVILQVLDKKAMKDKYKVAVIKRPVEFSKETYNKAYNDFSQFVAQNTTM 494 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + H + + + L + Sbjct: 495 DKIIANAEESGYRLLERADFRSAEHRVGGVKGTREALKWIFAAKEGEVSPLYECGENDHL 554 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL--RLPKDCNKLEKFASKI 226 + + + + D +K K E + + + + + + Sbjct: 555 MVVALEKINPAGYRNINLVADMLKAEIIKDKKAEKLIAEMKSASSIDQVKSMANAVSDSV 614 Query: 227 HDVSIGKAQYL--LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 ++ Y+ + K N T P GV I + +K E Sbjct: 615 KHITFSAPAYVSVTRASEPALGAYASKAEINKLTGPIKGNAGVYMIQVYNKEKSAEEFDA 674 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 K + ++ + ++ L A + Sbjct: 675 KNE-ENNLSN-MAGRYASSFINDLYKKADVK 703 >gi|42519890|ref|NP_965820.1| peptidylprolyl isomerase [Lactobacillus johnsonii NCC 533] gi|46396704|sp|P60810|PRSA2_LACJO RecName: Full=Foldase protein prsA 2; Flags: Precursor gi|41584180|gb|AAS09786.1| protease maturation protein precursor [Lactobacillus johnsonii NCC 533] Length = 298 Score = 40.8 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 25/288 (8%), Positives = 66/288 (22%), Gaps = 38/288 (13%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + L ++ + +++ + I+ + + + Sbjct: 1 MKRIIKVGALAA-SSFSLLFLAGCSSNNKEVAQYGDKKISQEQFYQEL------NSSPTS 53 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + I LI LK+ K N + ++ ++ S Sbjct: 54 KTILANMLIYGALKEAYGSKLNKDQVEADYNSYKKRYGSQFDSFLKENSYTKKSF----- 108 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + K + ++ + + V ++ Sbjct: 109 ------KQMIELNHLSKIALKKQMKPTTSQLKEEWKDYQPKIT-------VQHISTTSRD 155 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYL---LESDLHPQFQN 248 ++K + K++ + + GK + Sbjct: 156 TANTVIEK--------LNNGESFASLASKYSVDSLTSSNGGKLPAFDMQNRRYDSTFKKG 207 Query: 249 LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 K + T P G E I + + G + L+ Sbjct: 208 AYKLKNDEYTKEPIKVTNGYEVIKMINHPKKGNFADKQKELTEAIYNK 255 >gi|83858361|ref|ZP_00951883.1| rotamase family protein [Oceanicaulis alexandrii HTCC2633] gi|83853184|gb|EAP91036.1| rotamase family protein [Oceanicaulis alexandrii HTCC2633] Length = 635 Score = 40.8 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 41/135 (30%), Gaps = 15/135 (11%) Query: 1 MTSKVFT-SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR 59 M S + + + S I + ++ F + + S +S + + ++ ++ + Sbjct: 1 MLSLIRSLARSPIIGGMIIALLIAAFALWGVSDIFSGGGTS--ALVVGPQTVSASEVQRN 58 Query: 60 IALLKLQKINGE------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 Q L V+ LI ET + ++ G+T +T+ Sbjct: 59 YERQLFQIQRDNPQITREQADQMGLGDSVVRRLIAETAVDAKADQMGLTISDDTLFETLR 118 Query: 108 QHARNTGLSAEDFSS 122 F Sbjct: 119 SIPAFQNPFTNQFDP 133 >gi|159030471|emb|CAO91375.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 248 Score = 40.8 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 83/246 (33%), Gaps = 26/246 (10%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 IT DI K++ L ++ +I + E+ GI ++ + ++ Sbjct: 7 ITAEDILKQVKLSLKTS-------ELIEAIITRKMIANTAEEIGIKLEAEELQEMADKYR 59 Query: 111 RNTGLSAEDFSS-FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + L +E+ + ++ K + + F++++ Q + + + F K + Sbjct: 60 KMYKLLSEEDTWAWMKKNHLSLDDFEEFVYYQGLSTKLAVHLFADKI-------EPYFYE 112 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + + VL +++ + +E + +K + K Sbjct: 113 HQLDYAGVVMHEVVL--------EDEDLAMELFYSIQEGEMSFYDVAHKYIE--DKELRR 162 Query: 230 SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 G L DL P+ + + P VT KGV I + + + + L+ + Sbjct: 163 KGGYRGILSRKDLKPEISAAVFAATPPEVLKPIVTSKGVHLILVEEIIERKLDNWLRNKI 222 Query: 289 SAQNTP 294 + Sbjct: 223 ATDLFN 228 >gi|153864542|ref|ZP_01997413.1| secreted protein [Beggiatoa sp. SS] gi|152145964|gb|EDN72588.1| secreted protein [Beggiatoa sp. SS] Length = 110 Score = 40.8 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 9/105 (8%) Query: 13 IKLLTTYFVLIIFCIVPI-VSYKSWAMSSRIRTTINGEVI----TDGDISKRIALLKLQK 67 + +L I+ V I +N +VI + + L Q Sbjct: 1 MNKTYQSLILYCLLIISFDVCAAQRETLDYIVAIVNDDVIVNTALQQQLRREHEKLAQQN 60 Query: 68 ----INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 N LEK + +I+ L+ Q EK+GI + + + F Sbjct: 61 IELPPNVNLEKRVLDSMIMIALQLQLAEKTGIKVEDSHLKRSFTP 105 >gi|148547507|ref|YP_001267609.1| SurA domain-containing protein [Pseudomonas putida F1] gi|148511565|gb|ABQ78425.1| SurA N-terminal domain [Pseudomonas putida F1] Length = 213 Score = 40.8 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 48/163 (29%), Gaps = 13/163 (7%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-----------RIALLKLQKINGEL 72 I + ++ S + + +NG I + + + ++ + L Sbjct: 3 IVWLCLLLVLTSVSWADVPAARVNGVEIGLMRLERYFSEYLDAQGRAVTSIRNPGLYKRL 62 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 A+ ELI + L QE ++ GI V+ + G A + G Sbjct: 63 RDQALDELIDKELLWQEAQRQGIAVSDEHVSAQIGEIEAAFGSPALFERRLAEA-GFDRA 121 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + +Y + V + E+ A + Sbjct: 122 QYTEYTRHEMAAQQ-VYALLSAVDAPSQGEVEAFYDANQQRLQ 163 >gi|258592100|emb|CBE68405.1| DSBA oxidoreductase precursor [NC10 bacterium 'Dutch sediment'] Length = 355 Score = 40.8 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 59/175 (33%), Gaps = 6/175 (3%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSY----KSWAMSSRIRTTINGEVITDGDISKRI 60 + S+S + +L+ + ++ + + S+ I+ VIT +I K + Sbjct: 4 IGKSISGHRAIAIGAALLLWTVLWQQSAFGGEPTAKPVQSKAAAKIDDYVITLDEIEKAL 63 Query: 61 --ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118 L KL+ +L + + ELI + L E ++ GIT + + + Sbjct: 64 APQLAKLEDQKFQLLESKLDELIEKRLLAVEAKRRGITVEDLLKAEVTSKIPEVSDAEVT 123 Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 F + + GD + + ++ + L + + Sbjct: 124 AFITQNRARLQGDEAGLRPKVRDYLSDQKMEEKQRIYLAGLRQHAKVERFLEEPE 178 Score = 38.9 bits (88), Expect = 1.00, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 20/42 (47%) Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 R G E L+ + + K+E+ + Y+ LR +A + + Sbjct: 132 RLQGDEAGLRPKVRDYLSDQKMEEKQRIYLAGLRQHAKVERF 173 >gi|259418802|ref|ZP_05742719.1| putative peptidyl-prolyl cis-trans isomerse D [Silicibacter sp. TrichCH4B] gi|259345024|gb|EEW56878.1| putative peptidyl-prolyl cis-trans isomerse D [Silicibacter sp. TrichCH4B] Length = 611 Score = 40.8 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 8/75 (10%), Positives = 27/75 (36%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + + K + ++F + + + ++R T+ ++ D ++ + + Sbjct: 1 MKNLSKTFVWILMGLLFVGLAGFGAINVSGTTRTLATVGDATVSVDDYARALQQEQRAIQ 60 Query: 69 NGELEKIAVQELIVE 83 I + +LI Sbjct: 61 AQSGRSIPLSQLISM 75 >gi|94991309|ref|YP_599409.1| foldase protein PrsA [Streptococcus pyogenes MGAS10270] gi|94544817|gb|ABF34865.1| Peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes MGAS10270] Length = 316 Score = 40.8 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 30/315 (9%), Positives = 83/315 (26%), Gaps = 25/315 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + D ++ ++ V +S + ++ ++ G+ IT D Sbjct: 1 MRKEAQDMKQMNKLITGVVTLATVVTLSACQSSHNNTKLVSMKGDTITVSDFYNETK--- 57 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 N EL + A+ L++ + + + + +A+ + + Sbjct: 58 ----NTELAQKAMLSLVISRVFETQYANKVSDKEVEKAYKQ----------TADQYGTSF 103 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + Q +V+ + N + +Q T Sbjct: 104 KTVLAQSGLTPETYKKQIRLTKLVEYAVKEQAKNETISKKDYRQAYDAYTPTMTA----- 158 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + K ++ + +K + K+ + S Sbjct: 159 EIMQFEKEEDAKAALEAVKAEGADFAAIAKEKTIAADKKTTYTFDSGETTLPAEVVRAAS 218 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIE--KHE 301 + + +P +++ I + K + A + L K++ + Sbjct: 219 GLKEGNRSEIITALDPATSKRTYHIIKVTQKATKKADWKAYQKRLKDIIVTGKLKDPDFQ 278 Query: 302 AEYVKKLRSNAIIHY 316 + + K A + Sbjct: 279 NKVIAKALDKANVKI 293 >gi|229552932|ref|ZP_04441657.1| peptidylprolyl isomerase [Lactobacillus rhamnosus LMS2-1] gi|258540457|ref|YP_003174956.1| peptidylprolyl isomerase [Lactobacillus rhamnosus Lc 705] gi|229313708|gb|EEN79681.1| peptidylprolyl isomerase [Lactobacillus rhamnosus LMS2-1] gi|257152133|emb|CAR91105.1| Endopeptidase maturation protein prtM [Lactobacillus rhamnosus Lc 705] Length = 300 Score = 40.4 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 74/288 (25%), Gaps = 38/288 (13%) Query: 14 KLLTTYFVLIIFC--IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71 K L F+ + I+ + +S S T +G +T K + Sbjct: 3 KKLRVPFLAAMMASSIMLLSGCQSKQADSTTVATYSGGQVTQASFYKELK-------QSP 55 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 K + L++ + KS + E+F+SFL + G Sbjct: 56 TTKTVLANLLIYRALNKAYGKSVSAKSVDNTYN------SYKNEYGENFTSFLSQNGFSK 109 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 + F+Q + + +K K N +++ + ++ +L S Sbjct: 110 SSFRQSIRTNLLSEVALKKL--KKVTNSQLKAAWKTY------QPKVTVQHILTSDESTA 161 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD---LHPQFQN 248 Q + + ++ G + Sbjct: 162 KQVISDLAA-----------GKDFTTLAKTYSIDTSTKDKGGKVSFESNSKSLDSTFKDA 210 Query: 249 LLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 K T P G E I + G K L+A Sbjct: 211 AYKLKNGEYTQSPVKVTNGYEVIKMIKHPAKGTFSDSKKALTASVYSK 258 >gi|224014336|ref|XP_002296831.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220968686|gb|EED87032.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 122 Score = 40.4 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 8/60 (13%), Positives = 13/60 (21%), Gaps = 2/60 (3%) Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTT-NPYVTQKGVEYI 270 + + G + + P F+ T T GV I Sbjct: 59 ATFEELAKTESDCSSAKRGGDLGFFGRKKMQPAFEKASFDLGVGELTEEVVDTSSGVHII 118 >gi|170739823|ref|YP_001768478.1| hypothetical protein M446_1543 [Methylobacterium sp. 4-46] gi|168194097|gb|ACA16044.1| conserved hypothetical protein [Methylobacterium sp. 4-46] Length = 303 Score = 40.4 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 8/71 (11%), Positives = 22/71 (30%), Gaps = 2/71 (2%) Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKH 300 + + + P + G + + + G ++ +S K + Sbjct: 207 PAFARAAFALPVGSWSGPVESAYGTHLVLVSSRAQGALRGYDEVRNLVSEDWHRAKEREL 266 Query: 301 EAEYVKKLRSN 311 + Y+ +LR Sbjct: 267 KDAYLGRLRDK 277 >gi|46204905|ref|ZP_00049316.2| COG0760: Parvulin-like peptidyl-prolyl isomerase [Magnetospirillum magnetotacticum MS-1] Length = 294 Score = 40.4 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 5/63 (7%), Positives = 21/63 (33%), Gaps = 6/63 (9%) Query: 257 TTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEK----HEAEYVKKLRS 310 + P + G + + + +K + + ++ + + ++ R+ Sbjct: 1 MSEPVKGRFGTVLLRVTGIEPGDIKPFDEVKDEIRKEVALRRVREGEFDKAQDAIEDARA 60 Query: 311 NAI 313 +A Sbjct: 61 SAK 63 >gi|183232191|ref|XP_653673.2| peptidyl-prolyl cis-trans isomerase [Entamoeba histolytica HM-1:IMSS] gi|169802158|gb|EAL48312.2| peptidyl-prolyl cis-trans isomerase, putative [Entamoeba histolytica HM-1:IMSS] Length = 116 Score = 40.4 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 20/86 (23%) Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + + +QK E+ + G +E P Sbjct: 22 WRETTITRTKEQAIQKLKVLREQIVKGKKDFRQTAIIESDCSSSAQGGLLLGTIEQYQKP 81 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYI 270 LK ++ T GV I Sbjct: 82 FADAYLKLKVGEISDIIETDSGVHII 107 >gi|89897067|ref|YP_520554.1| hypothetical protein DSY4321 [Desulfitobacterium hafniense Y51] gi|89336515|dbj|BAE86110.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 266 Score = 40.4 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 21/232 (9%), Positives = 53/232 (22%), Gaps = 12/232 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK-------- 64 +KL+ ++ ++ + + INGE IT +I + I K Sbjct: 1 MKLIRAGVFFLMAALILSGCASQNYPEN-VVAVINGETITQEEIDEAINEGKLHIDLTEA 59 Query: 65 ---LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 L N ++ A+ + + + + Sbjct: 60 LRLLNGENSMSQRDAMLQAFGVDEGNMTSGQKRFFEGIERSSAKIPTANDALNSLLVEEV 119 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 + + G + + + M + E +K +I + Sbjct: 120 LYQEAVKQGHEASIDRVKQILEESKRINLEAMSQDEEALREYNEYVEKTASIYHQYGFTS 179 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 + Q + + + + G+ Sbjct: 180 EEDYLSKRMDRTAQAMAINTMNYEFDKVMADKLPGVDSAQIERGNAWEDYGE 231 >gi|67922823|ref|ZP_00516322.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Crocosphaera watsonii WH 8501] gi|67855316|gb|EAM50576.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Crocosphaera watsonii WH 8501] Length = 134 Score = 40.4 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 5/104 (4%), Positives = 21/104 (20%), Gaps = 1/104 (0%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTN 259 + + +++ + G + + Q L + Sbjct: 14 AQELYFRIKEGENTFSELARQYSQGSEAQTGGLLGPVELNTPHPKIAQILAASRPGQLSP 73 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 P + + + + L + + + Sbjct: 74 PTPIGDWWIILRLEKYMSAQLDDNTRQRLLNELFQGWLMAQVQK 117 >gi|84686955|ref|ZP_01014838.1| hypothetical protein 1099457000244_RB2654_01575 [Maritimibacter alkaliphilus HTCC2654] gi|84664929|gb|EAQ11410.1| hypothetical protein RB2654_01575 [Rhodobacterales bacterium HTCC2654] Length = 613 Score = 40.4 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 15/198 (7%), Positives = 37/198 (18%), Gaps = 16/198 (8%) Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + + F Q + + D + + + ++ A + + Sbjct: 200 PEPTEADLEAYYEANPDDFTTPETRQITYGWLKPEDVLDEIPMDDTQLQALYDQRIDEFQ 259 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 + D E+ + + Sbjct: 260 VPERRLVERLVFGS------ADEAQAAADRIEAGETTFDQEVQARGLSLSDV-----DMG 308 Query: 236 YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 + L + + P T G + L + + Q Sbjct: 309 DVTRRALGQAGEPIFALDAPGVVGPIETDLGPALFRMNAI--LSAQETSFEEVRDQLFEE 366 Query: 296 KIEKHEAEYVKKLRSNAI 313 V R+ A Sbjct: 367 YAADAARRLV---RTRAT 381 >gi|210135166|ref|YP_002301605.1| peptidyl-prolyl cis-trans isomerase D [Helicobacter pylori P12] gi|210133134|gb|ACJ08125.1| peptidyl-prolyl cis-trans isomerase D [Helicobacter pylori P12] Length = 487 Score = 40.4 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 35/320 (10%), Positives = 87/320 (27%), Gaps = 21/320 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK +EL + +K +EKS DS A + GL A Sbjct: 61 RRLKDAYAESIPN---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISALFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPSDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EKHEAEYVKKLRSNAIIHYY 317 + L+ A + Y Sbjct: 284 NEKALRSYVALK-KANVQNY 302 >gi|167040994|ref|YP_001663979.1| hypothetical protein Teth514_2383 [Thermoanaerobacter sp. X514] gi|300913795|ref|ZP_07131112.1| conserved hypothetical protein [Thermoanaerobacter sp. X561] gi|307725518|ref|YP_003905269.1| hypothetical protein Thet_2431 [Thermoanaerobacter sp. X513] gi|166855234|gb|ABY93643.1| hypothetical protein Teth514_2383 [Thermoanaerobacter sp. X514] gi|300890480|gb|EFK85625.1| conserved hypothetical protein [Thermoanaerobacter sp. X561] gi|307582579|gb|ADN55978.1| hypothetical protein Thet_2431 [Thermoanaerobacter sp. X513] Length = 238 Score = 40.4 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 18/154 (11%), Positives = 45/154 (29%), Gaps = 9/154 (5%) Query: 39 SSRIRTTINGEVITDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 I +NG I + R L L ++ +Q+LI E +++ K I Sbjct: 63 EGDIIAEVNGVPIYKNEFELRKGLALASGVQADNIDDYILQKLIREKVQEYLASKYNIKV 122 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL--------AIQSIWPDVVK 149 N +N + + + E + +Y ++ + Sbjct: 123 SQNEINAYIEKEKKEFNEYPEAKKKLNELIAASGMTEDEYWNTYEKYNARRILLFNKLYD 182 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + + +++ + + Y+ + Sbjct: 183 SIIEEGIKSGKLKKAEDMTNDVQNEYKRYVDSII 216 >gi|118497644|ref|YP_898694.1| hypothetical protein FTN_1053 [Francisella tularensis subsp. novicida U112] gi|195536345|ref|ZP_03079352.1| numod1 domain family protein [Francisella tularensis subsp. novicida FTE] gi|118423550|gb|ABK89940.1| outer membrane protein of unknown function [Francisella novicida U112] gi|194372822|gb|EDX27533.1| numod1 domain family protein [Francisella tularensis subsp. novicida FTE] Length = 477 Score = 40.4 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 14/127 (11%), Positives = 36/127 (28%), Gaps = 5/127 (3%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI-RTTINGEVITDGDISKR 59 M L + + IF I + + + SSR + I+ + Sbjct: 1 MLQSFNDRLKGPFTWIVVISISFIFVISGMTFFFTNIGSSRAYVAKVGDNEISSQQFQQY 60 Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 E ++ + ++I + L + ++ I + + + Sbjct: 61 AQ----SATTEEQKRAILSQMIDQYLILADAQRHDIVVSKLALQSAIFTNPMFFDKDGKF 116 Query: 120 FSSFLDK 126 + L + Sbjct: 117 SAEKLKQ 123 >gi|294790992|ref|ZP_06756150.1| peptidylprolyl isomerase PrsA1 [Scardovia inopinata F0304] gi|294458889|gb|EFG27242.1| peptidylprolyl isomerase PrsA1 [Scardovia inopinata F0304] Length = 301 Score = 40.4 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 29/285 (10%), Positives = 71/285 (24%), Gaps = 37/285 (12%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K + ++ + ++ + ++ T +G ++ + + Sbjct: 4 KKVRFAALIGLIASSSLM-LGACGGANTTVATYSGGDVSQESFYQELK-------ESPSS 55 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 K + L++ Q KS + + FS++L + Sbjct: 56 KTILANLLIYRALDQAYGKSVTDKQVDKAYE------KYKKQYGSGFSAYLSQNNYTKAS 109 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 FK+ + + +K L+ + ++ +L Sbjct: 110 FKRGIRTNLLSEVALKKLKKPSQAQLKDAWKTYH--------PQVTVQHILT-------- 153 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLL--ESDLHPQFQNLL 250 + + + + ++ GK +L S Sbjct: 154 ---QDEATARSVIAQLNAGKDFASLAKTYSLDTSSKDEGGKISFLSTDRSYDSTFKDAAY 210 Query: 251 KKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 K + T P G E I + G + K L+ Sbjct: 211 KLQKGKYTKEPVKVTDGYEVIKMVSNPGKGSFESRKKELTETVYA 255 >gi|332705502|ref|ZP_08425580.1| hypothetical protein LYNGBM3L_08150 [Lyngbya majuscula 3L] gi|332355862|gb|EGJ35324.1| hypothetical protein LYNGBM3L_08150 [Lyngbya majuscula 3L] Length = 286 Score = 40.4 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 73/245 (29%), Gaps = 26/245 (10%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 IT DI ++ L ++ ++ + E +GI + + Q Sbjct: 48 ITTEDIFNQVKLSYKIPD-------MIEGIVTRKVIAATAESAGIRVEIEDLQQAADQFR 100 Query: 111 RNTGLSAEDFSS-FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 L + + +L + + F++ + I +V++ F K + Sbjct: 101 LMNKLENSEDTWAWLQNYSMSLDDFEEVVYTNLIANKLVQHLFADKV-------EPYFFE 153 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + + VL ++ + +E + ++ + Sbjct: 154 HQLDYAAAVIYEVVL--------DDKDLAMELFYALDEGETSFYEIAHEYIQ--DTELRR 203 Query: 230 SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 S G + + P+ + P V+ +GV I + + + L+A + Sbjct: 204 SGGYRGIVKRHEFKPEISAAVFAAEPPQLLKPIVSSQGVHLILVEEIVKSELDGKLRAQI 263 Query: 289 SAQNT 293 + Sbjct: 264 VSDLF 268 >gi|222148891|ref|YP_002549848.1| peptidyl-prolyl cis-trans isomerase [Agrobacterium vitis S4] gi|221735877|gb|ACM36840.1| peptidyl-prolyl cis-trans isomerase [Agrobacterium vitis S4] Length = 629 Score = 40.4 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 26/232 (11%), Positives = 62/232 (26%), Gaps = 15/232 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD------- 53 M + + ++ ++ F I I S S ++ + + + Sbjct: 1 MLVILRKAAGTWVAKGLLLLLVASFAIWGISSSIMSDTSDKVI-KVGSQSVNSNEFRLAY 59 Query: 54 ----GDISKRI--ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 D+S+R L Q + +E Q+L+ Q + + + Sbjct: 60 QRQISDLSRRFGTQLTSEQARSLGIESQVYQQLVAGAALDQLASDMNLGLSQDRLAQLIG 119 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG-NLEMEIPAN 166 + + + +Q + V + ++ + Sbjct: 120 DDPAFKNTNGQFDRQLFTSRLRNSGIREQDYITERSKVAVRSQIVDATAEGFVPPKVLID 179 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 K+ R + + D V K + +SR R P+ + Sbjct: 180 ALKLYRQESRSIDYLLLTTANIDPIKAPDETVLKTWFNTMKSRYRAPEYRSF 231 >gi|148255838|ref|YP_001240423.1| putative peptidylprolyl isomerase [Bradyrhizobium sp. BTAi1] gi|146408011|gb|ABQ36517.1| Putative Peptidylprolyl isomerase [Bradyrhizobium sp. BTAi1] Length = 636 Score = 40.4 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 16/216 (7%), Positives = 42/216 (19%), Gaps = 14/216 (6%) Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157 + + A G L + + I +V + + K+ Sbjct: 190 NEQRSIDYLKLDAAQAGPIDAPSPEVLASYFDEHKAQFKAPEYRKISFVLVTPEDIGKWT 249 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 ++ E + + R V + Q + + Sbjct: 250 DVSDEDARKLFDQRKAQMGTPEKRQVQQMTFPTMEEAQAARARIASGEVSFDELAKERNL 309 Query: 218 KLEKFASKIHDVSIGKAQYLLESDL--HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275 + ++ + + P V + + Sbjct: 310 NPADL----------DLGLVTKTAILDPAVADMAFSLPTGEVSQPVKGAFNVALVKVSAI 359 Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + G+ ++ V LR Sbjct: 360 QP--GQQPAYESVATDIKKEIAADRAKSQVANLRDK 393 >gi|315124196|ref|YP_004066200.1| hypothetical protein ICDCCJ07001_630 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017918|gb|ADT66011.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 454 Score = 40.4 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 27/268 (10%), Positives = 71/268 (26%), Gaps = 19/268 (7%) Query: 3 SKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL 62 K + ++ ++ + FV F + SS T+ E I + R Sbjct: 8 HKKYLVVTIWVSTI--AFVGAGFLGWGAYDFNLNRSSS--VATVGNEKIGFSEFDTRYRQ 63 Query: 63 L-------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 + ++ IA+ L+ + L + GI + N + Sbjct: 64 ILSYYNQISNGALTPENAEQLGIKNIALSSLVEDKLLLNFAKDLGIGVNENEILQKLANT 123 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + + + + +N + Q + + N+ + K Sbjct: 124 REFQDPTGDFNKTIYYELLNANNLTPKDYETQLANEVITDKL--NQIFNIPSKDEELKML 181 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + +++ L + N N+ ++K + +E + + Sbjct: 182 ASSYFMQDALSIAKIDYDKKNIKINEEDLKKLWNEHKEDYKTKKIYEISTYFLSVSNEKI 241 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNT 257 + + D + + Sbjct: 242 DDKELEKFYNQDENKLKYKDFAGKVMDF 269 >gi|115376106|ref|ZP_01463351.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1] gi|310820988|ref|YP_003953346.1| hypothetical protein STAUR_3731 [Stigmatella aurantiaca DW4/3-1] gi|115366921|gb|EAU65911.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1] gi|309394060|gb|ADO71519.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 245 Score = 40.4 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 48/148 (32%), Gaps = 9/148 (6%) Query: 40 SRIRTTINGEVITDGDISKR-----IALLKLQKINGELEKI----AVQELIVETLKKQEI 90 R+ I G+V+T ++ I +Q G L++ A++ I + L+ Sbjct: 53 DRVVAIIEGQVLTLSELEFETRVALIQRGAMQAAAGPLDEETLKGALELAINQRLQVLSA 112 Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 ++ V R+ S F +FL G + L ++ + Sbjct: 113 DRLEAFTAEQAEVDERVAGFRDRFESEAGFQAFLGHAGADIQQLTEVLTRSVRAERILDS 172 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREY 178 + E E+ ++ + Y Sbjct: 173 RIRPRAQVGEAELSGYYKQHADEYPEGY 200 >gi|298387000|ref|ZP_06996554.1| membrane protein [Bacteroides sp. 1_1_14] gi|298260150|gb|EFI03020.1| membrane protein [Bacteroides sp. 1_1_14] Length = 330 Score = 40.4 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 49/162 (30%), Gaps = 7/162 (4%) Query: 38 MSSRIRTTINGEVITDGDISKRIA--LLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95 + I +N E I D+S+ L L + E++ + +LI + L +E +K + Sbjct: 20 ANKEIVAEVNDETILLSDLSEASKQELFDLLNMAYEIKSKVLDDLIKKKLLDKEAKKQNM 79 Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS-----IWPDVVKN 150 T + Y ++ N + ++ I + + + Sbjct: 80 TAEQYLELYVDMRTGTNLDSIKAFYKLADNQVNIVRSQLYGSSPKTMEGELTLKNKLRSI 139 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 +L + K + + ++ + Sbjct: 140 FIQQLVDSLYSKASIKKYIFPPKQPKCVITDLCVYYRGNMDA 181 >gi|26990197|ref|NP_745622.1| hypothetical protein PP_3485 [Pseudomonas putida KT2440] gi|24985139|gb|AAN69086.1|AE016542_1 hypothetical protein PP_3485 [Pseudomonas putida KT2440] Length = 213 Score = 40.0 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 49/163 (30%), Gaps = 13/163 (7%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-----------RIALLKLQKINGEL 72 I + ++ S + + +NG I + + + ++ + L Sbjct: 3 IVWLCLLLVLTSVSWADVPAARVNGVEIGLMRLERYFSEYLDAQGRAVTSIRNPGLYKRL 62 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 A+ ELI + L QE ++ GI V+ + G A + G Sbjct: 63 RDQALDELIDKELLWQEAQRQGIAVSDEQVSAQVGEIEAAFGSPALFERRLAEA-GFDRA 121 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + +Y + V E E+ A ++ Sbjct: 122 QYTEYTRHEMAAQQ-VYALLSAVDAPSEGEVEAFFDANQDRLQ 163 >gi|284052496|ref|ZP_06382706.1| hypothetical protein AplaP_13593 [Arthrospira platensis str. Paraca] gi|291568772|dbj|BAI91044.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 250 Score = 40.0 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 24/262 (9%), Positives = 70/262 (26%), Gaps = 31/262 (11%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 + +I +I R+ Q + + ++ + E I E +E + + Sbjct: 4 VYKVGETIIKAEEIPSRLKHY--QMMVPFVREVILDEAIAEITCTEEEAAAALE------ 55 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 A++ S E ++L+ + + + + K + + Sbjct: 56 ----KFAAQHQLTSPEAQKAWLNLNKLTLEEAQAIAERPIKIEKFKRERWTNKVESYFIT 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++ + +R Q ++ Sbjct: 112 RKSSLDHVVYSLIRTKNPGLAHELYFRISEGEQE------------------FSEAAREY 153 Query: 223 ASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + + G + + HP + L P + + I + + Sbjct: 154 SEGPESRTGGIMGPVSLAQPHPAISKLLAVSQPGQLWPPRPLSEWMVIIRLEKFIPAQLD 213 Query: 282 IALKAYLSAQNTPTKIEKHEAE 303 +++ +L + T + + A+ Sbjct: 214 ESMRRHLIDELFETWLREEIAK 235 >gi|260494276|ref|ZP_05814407.1| peptidylprolyl isomerase [Fusobacterium sp. 3_1_33] gi|260198422|gb|EEW95938.1| peptidylprolyl isomerase [Fusobacterium sp. 3_1_33] Length = 563 Score = 40.0 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 31/262 (11%), Positives = 71/262 (27%), Gaps = 8/262 (3%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +I L + N + +E T + I + A+ Sbjct: 207 EMQIKDLAPEYENLVEKTAYEEEGFNITNLDLARATANIMLGQKISKEDAEKQAKEMISR 266 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + ++G+ N ++ + + + E+ K+ Sbjct: 267 QIKMAKIAKEKGVKVNENLDSISQFQDYYIGLAEKVRDDVKLTDDELLKFFNANKSKYSI 326 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 L I + + K + S L K + ++ + Sbjct: 327 PATADAKLVFISVKSAKEDDDLAKEKAEKLLSELTPENFTEKGKSLSNNQDIIY-QDLGT 385 Query: 237 LLESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 + + +F+ L+ +N T+ G + K++ + ++ P Sbjct: 386 FGTTAMVKEFEEALRDVPSNTVVNKVIKTKFGYHIAYV--KKNDNNQQWEVEHILIVPYP 443 Query: 295 TKIEKHEAEYVKKLRS-NAIIH 315 EK E ++KL A I Sbjct: 444 --SEKTVTEKLEKLNKVKAEIE 463 >gi|254712135|ref|ZP_05173946.1| peptidyl-prolyl cis-trans isomerase C [Brucella ceti M644/93/1] Length = 85 Score = 40.0 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 5/68 (7%) Query: 251 KKSQNNTTN-PYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306 + + TT P ++ G + + D+R + + ++ + K ++Y+ Sbjct: 6 RMTPGETTANPIESRFGYHIVRL-DRRVEGEELPFDYVADKIAGWLEASTWSKAVSQYIA 64 Query: 307 KLRSNAII 314 L + A I Sbjct: 65 ILAAEAEI 72 >gi|148555082|ref|YP_001262664.1| hypothetical protein Swit_2167 [Sphingomonas wittichii RW1] gi|148500272|gb|ABQ68526.1| hypothetical protein Swit_2167 [Sphingomonas wittichii RW1] Length = 288 Score = 40.0 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 12/102 (11%), Positives = 35/102 (34%), Gaps = 1/102 (0%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 ++ V + +++ ++ +NG I+ +S L L +++ Sbjct: 9 ISACLVAGAGLGLILLAGCGKTPKGQVVAIVNGNDISMQQLSVEAQDLPLPI-PETIDRR 67 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117 A+ + I++ + +E+E F+ + Sbjct: 68 ALSKAILQAVIDRELEVQAAREQRLDKTPQFLALKQRNEEEL 109 >gi|284097541|ref|ZP_06385612.1| secreted protein [Candidatus Poribacteria sp. WGA-A3] gi|283830948|gb|EFC34987.1| secreted protein [Candidatus Poribacteria sp. WGA-A3] Length = 178 Score = 40.0 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 16/178 (8%), Positives = 54/178 (30%), Gaps = 10/178 (5%) Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL------KLQKINGELE 73 ++ + + + + I +N + IT ++ + + + Sbjct: 4 YITFLILFCIGGNVYAQTLIDSIIAVVNEDAITRSELEDELRIATVFRIRTAPISTTAEQ 63 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + + +I QE E+ GI + ++E + + + Sbjct: 64 RTGLNTIINRKFVLQEAERLGIIVTERNTQVAAKIAEISAKYASETVF----QNVLQEAQ 119 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 ++ ++ ++ ++F + ++ ++ +IT+ P N Sbjct: 120 LEKEAVEAQVYDQLIYDEFFRRIFSMPSXAKRSRDSPSHITIPIVPSLLYHQQSPSNH 177 >gi|119485676|ref|ZP_01619951.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lyngbya sp. PCC 8106] gi|119457001|gb|EAW38128.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lyngbya sp. PCC 8106] Length = 250 Score = 40.0 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 30/262 (11%), Positives = 70/262 (26%), Gaps = 31/262 (11%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 + VI +I + + Q + L ++ + I E + E+ + Sbjct: 4 VYKVGETVIKGEEIPALLK--RYQLMPQFLREVIIDGAITE--IECSPEEQKTALEKFAA 59 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + + D Q I + K Q+ W + V+N F+ + NL+ Sbjct: 60 QHQLTSSEAQEAWLKSQNLTTEDLQAIAERPVKLEKFKQNTWSNKVENYFISRKSNLDHV 119 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + + E R ++ Sbjct: 120 VYSLIRTKNSGLAHELYFRV--------------------------LEGEQSLGEAAREY 153 Query: 223 ASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + + G + S HP + L P + + I + + Sbjct: 154 SEGPESRTGGLLGPVPLSQPHPAISKLLSVSQPGQLWAPRPLAEWMVIIRLEKFIPAQLD 213 Query: 282 IALKAYLSAQNTPTKIEKHEAE 303 +++ L + T + + Sbjct: 214 ESMRRRLIDELFETWLREQLTA 235 >gi|261319793|ref|ZP_05958990.1| peptidyl-prolyl cis-trans isomerase [Brucella ceti M644/93/1] gi|261292483|gb|EEX95979.1| peptidyl-prolyl cis-trans isomerase [Brucella ceti M644/93/1] Length = 82 Score = 40.0 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 5/70 (7%) Query: 249 LLKKSQNNTTN-PYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + + TT P ++ G + + D+R + + ++ + K ++Y Sbjct: 1 MERMTPGETTANPIESRFGYHIVRL-DRRVEGEELPFDYVADKIAGWLEASTWSKAVSQY 59 Query: 305 VKKLRSNAII 314 + L + A I Sbjct: 60 IAILAAEAEI 69 >gi|254243138|ref|ZP_04936460.1| hypothetical protein PA2G_03937 [Pseudomonas aeruginosa 2192] gi|126196516|gb|EAZ60579.1| hypothetical protein PA2G_03937 [Pseudomonas aeruginosa 2192] Length = 428 Score = 40.0 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 14/171 (8%), Positives = 48/171 (28%), Gaps = 14/171 (8%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + K + + E + + V + + + + + ++ + E R Sbjct: 265 RELAGKVSDKDAEAYYRRNLERYRNVAQVQAAHIRLADQASADKVYAELRGGLAFDEAVR 324 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLE--SDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 A G + L + L + + + P Sbjct: 325 R---------YSLADDRDRDPPGDLGLIRPQDGRLDLLRKTALIQKADTVSQPMRIDGAF 375 Query: 268 EYIAI---CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 E + + D++ + +++ ++ ++ ++ L + A + Sbjct: 376 EIVRVRSREDRQLPLDDRSVRFEVNQAVAREQLAAQFETRLRNLLAGARVE 426 >gi|15595225|ref|NP_248717.1| hypothetical protein PA0027 [Pseudomonas aeruginosa PAO1] gi|9945847|gb|AAG03417.1|AE004442_4 hypothetical protein PA0027 [Pseudomonas aeruginosa PAO1] Length = 428 Score = 40.0 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 14/171 (8%), Positives = 48/171 (28%), Gaps = 14/171 (8%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + K + + E + + V + + + + + ++ + E R Sbjct: 265 RELAGKVSDKDAEAYYRRNLERYRNVAQVQAAHIRLADQASADKVYAELRGGLAFDEAVR 324 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLE--SDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 A G + L + L + + + P Sbjct: 325 R---------YSLADDRDRDPPGDLGLIRPQDGRLDLLRKTALIQKADTVSQPMRIDGAF 375 Query: 268 EYIAI---CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 E + + D++ + +++ ++ ++ ++ L + A + Sbjct: 376 EIVRVRSREDRQLPLDDRSVRFEVNQAVAREQLAAQFETRLRNLLAGARVE 426 >gi|297544426|ref|YP_003676728.1| hypothetical protein Tmath_0987 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842201|gb|ADH60717.1| conserved hypothetical protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 238 Score = 40.0 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 43/154 (27%), Gaps = 9/154 (5%) Query: 39 SSRIRTTINGEVITDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 I +NG I + R L L ++ +Q+LI E +++ K I Sbjct: 63 EGDIIAEVNGIPIYKNEFELRKGLALASGVQADNIDDYILQKLIREKVQEYLASKYNIKV 122 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL--------AIQSIWPDVVK 149 N +N + + + E + +Y ++ + Sbjct: 123 SQNEINAYIEKEKKEFNEYPEAKKKLNELIAASGMTEVEYWNTYEKYNARRILLFNKLYN 182 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + E++ ++Y V Sbjct: 183 SIIEEGIKRGELKKVEQMTSDVQNEHKKYFDSIV 216 >gi|209528083|ref|ZP_03276560.1| conserved hypothetical protein [Arthrospira maxima CS-328] gi|209491474|gb|EDZ91852.1| conserved hypothetical protein [Arthrospira maxima CS-328] Length = 250 Score = 40.0 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 23/262 (8%), Positives = 70/262 (26%), Gaps = 31/262 (11%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 + +I +I R+ Q + + ++ + E I + +E + + Sbjct: 4 VYKVGETIIKAEEIPSRLKHY--QMMVQFVREVILDEAIADITCTEEEAAAALE------ 55 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 A++ S E ++L+ + + + + K + + Sbjct: 56 ----KFAAQHQLTSPEAQKAWLNLNKLTLEEAQAIAERPIKIEKFKRERWTNKVESHFIT 111 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 ++ + +R Q ++ Sbjct: 112 RKSSLDHVVYSLIRTKNPGLAHELYFRISEGEQE------------------FSEAAREY 153 Query: 223 ASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + + G + + HP + L P + + I + + Sbjct: 154 SEGPESRTGGIMGPVSLAQPHPAISKLLAVSQPGQLWPPRPLSEWMVIIRLEKFIPAQLD 213 Query: 282 IALKAYLSAQNTPTKIEKHEAE 303 +++ +L + T + + A+ Sbjct: 214 ESMRRHLIDELFETWLREEIAK 235 >gi|322391823|ref|ZP_08065288.1| peptidyl-prolyl cis-trans isomerase [Streptococcus peroris ATCC 700780] gi|321145303|gb|EFX40699.1| peptidyl-prolyl cis-trans isomerase [Streptococcus peroris ATCC 700780] Length = 313 Score = 40.0 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 28/313 (8%), Positives = 73/313 (23%), Gaps = 41/313 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L + ++ S + I G+VIT+ + + N Sbjct: 3 KKLLAGAITLLSVATLAACSNSSQGADLISMK--GDVITEHQFFEEVK-------NNATA 53 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + + + ++ + +++ + + ++ + + Sbjct: 54 QQVLLNMTIQKVFEKQYGSEVSDKEVEDAVAEEQKKYGDSYQIVLSRAGMTAE------- 106 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 Q +V+ E E+ K + ++ ++K + Sbjct: 107 ---SRKAQIRTSKLVEYAVK---KAAESELTDENYKKAYDEYTPEVTAQIIKLDSEDKAK 160 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES-DLHPQFQNLLKK 252 K + K + + G+ + S +L + Sbjct: 161 EVLAKAKESGADFAQLAKDNSTDEKTKA--------NGGEITFDSASTELPDVVKKAAFA 212 Query: 253 -SQNNTTNPYVTQK------GVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE--A 302 N ++ + + K + K L K Sbjct: 213 LDVNGVSDVITAPGTQAYSSSFYIVKLTKKTEKSSNIEDYKEKLKTVILTQKQNDATFVQ 272 Query: 303 EYVKKLRSNAIIH 315 + K A I Sbjct: 273 GVISKELQAANIK 285 >gi|261208875|ref|ZP_05923312.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium TC 6] gi|289566923|ref|ZP_06447329.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium D344SRF] gi|294616439|ref|ZP_06696226.1| foldase protein PrsA [Enterococcus faecium E1636] gi|260077377|gb|EEW65097.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium TC 6] gi|289161290|gb|EFD09184.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium D344SRF] gi|291590690|gb|EFF22412.1| foldase protein PrsA [Enterococcus faecium E1636] Length = 303 Score = 40.0 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 27/313 (8%), Positives = 90/313 (28%), Gaps = 44/313 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + F+ + + + + + G I++ ++ + ++ Sbjct: 1 MKKRFLALAIVLGTGLLSGCTNAGEKTAVSYKGGTISEQEVMDSLKKMQG-------ADS 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 AVQ+LI + + +K G + ++ + Q + G S + Q + + Sbjct: 54 AVQQLI---VYQVFEDKYGDDVSTKEIDSQYDQTKKQLGDSFDS-------QLKSAGYTE 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 Q + + ++ + + ++ ++ ++ Sbjct: 104 QTFKDSIKQSLAFQEGLKKHIKLTDEDLKTAW-----ESFHPEVEAQIIQVASEDDAKDV 158 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF--QNLLKK 252 + + ++ GK ++ + P + K Sbjct: 159 KKAA----------DKGDDFSKLAKDKSTDTTTKEDGGKVKFDSTTTTVPAEVKEAAFKL 208 Query: 253 SQNNTTNPYVTQKG------VEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK--HEAE 303 ++ + + + K++ G ++ K L T TK+ + + Sbjct: 209 KDGQVSDVITSTNASTYTTEYYVVKMVKKQNKGNDMDKYKKELKEIATDTKLSDSTFQNK 268 Query: 304 YVKKLRSNAIIHY 316 + ++ +A + Sbjct: 269 VIGEVLKDANVKI 281 >gi|104781925|ref|YP_608423.1| hypothetical protein PSEEN2850 [Pseudomonas entomophila L48] gi|95110912|emb|CAK15628.1| conserved hypothetical protein; putative signal peptide [Pseudomonas entomophila L48] Length = 213 Score = 40.0 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 43/153 (28%), Gaps = 11/153 (7%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISK-----------RIALLKLQKINGELEKIAVQEL 80 + +NG I + + +A ++ + L + A+ EL Sbjct: 11 GVTPAIFAEAPVARVNGVEIGALRLERYFTEYLQAQGRAVASIRNPNLYQRLREQALDEL 70 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I + L QE + GI D V + G A D D+ Sbjct: 71 IDKELLWQEARRQGIAIDDEQVRARVAEVEAAFGSPAVFARRLEDAGFDHDSFADYTRHE 130 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 + + + + E+ + + + Sbjct: 131 MAAQEAFARLTVVEEPSAAEIAAFYDANRQRLQ 163 >gi|91774761|ref|YP_544517.1| hypothetical protein Mfla_0406 [Methylobacillus flagellatus KT] gi|91708748|gb|ABE48676.1| hypothetical protein Mfla_0406 [Methylobacillus flagellatus KT] Length = 55 Score = 40.0 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 17/47 (36%), Gaps = 2/47 (4%) Query: 253 SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKI 297 + T P T+ G I + + R + +K L Q KI Sbjct: 6 PKGLTPEPIRTRFGWHIIELKNIRKAEPPPFEEVKNELIRQLQVRKI 52 >gi|153811643|ref|ZP_01964311.1| hypothetical protein RUMOBE_02035 [Ruminococcus obeum ATCC 29174] gi|149832384|gb|EDM87469.1| hypothetical protein RUMOBE_02035 [Ruminococcus obeum ATCC 29174] Length = 504 Score = 40.0 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 32/340 (9%), Positives = 85/340 (25%), Gaps = 47/340 (13%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKRIALLKLQKI-- 68 + T L V +++ + T++G I G +S + + Q Sbjct: 8 MTKRTAVAALTGVMAVGMLTGCGEKKLDGTKTVATVDGTEIPLGIVSLSVREGQAQTEAM 67 Query: 69 -----------------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 + + +++++ + + K++ + + Sbjct: 68 YKSFMGGQDYSIWSMDAEDGKTYGEQAVEQSLKDVELMYIMKEKAADYNVEVTDDDEQKI 127 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 A ++E+ L + + +S D + D + E + + Sbjct: 128 ADAAAAFMAANSEETLQELAVSEDQIKTYLELQTYKSRMHDPLIADVDKDVSDEEAQQSS 187 Query: 166 NKQ---------KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + +E + + + + K + D+ S Sbjct: 188 FDYVSISTADLSDDEIKQKKEDAQKILDDLKAAGSDGDLNEIAKSVDDSYSSVSGTFDTN 247 Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICD 274 K S S S + +L+ ++ P T + + Sbjct: 248 EDAAKEDSDEESDSS-----SSSSAYPDEVMKVLRTLKDGEIGPDVIETDTSYYVVKLDK 302 Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 D K + + +++ A I Sbjct: 303 VNDEEATETKKQSIISTRENKLYTDTTEKWLDD----ADI 338 >gi|293365248|ref|ZP_06611965.1| peptidyl-prolyl cis-trans isomerase [Streptococcus oralis ATCC 35037] gi|307703788|ref|ZP_07640729.1| foldase protein prsA [Streptococcus oralis ATCC 35037] gi|315613010|ref|ZP_07887921.1| peptidyl-prolyl cis-trans isomerase [Streptococcus sanguinis ATCC 49296] gi|291316698|gb|EFE57134.1| peptidyl-prolyl cis-trans isomerase [Streptococcus oralis ATCC 35037] gi|307622623|gb|EFO01619.1| foldase protein prsA [Streptococcus oralis ATCC 35037] gi|315315120|gb|EFU63161.1| peptidyl-prolyl cis-trans isomerase [Streptococcus sanguinis ATCC 49296] Length = 313 Score = 40.0 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 81/313 (25%), Gaps = 41/313 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L + ++ S I G+VIT+ + + N Sbjct: 3 KKLMAGAITLLSVATLAACSNSSEGKDLISMK--GDVITEHQFFEEVK-------NNPTA 53 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + + + ++ + +Q+ D + + ++ S + Sbjct: 54 QQVLLNMTIQKVFEQQYGSEVTDKDVDDAVAEEQKKYGDSYNSVLQRAGMT--------- 104 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + Q +V+ E E+ + + + ++ ++K + Sbjct: 105 -PETRKAQIRTSKLVELAVK---KAAESELTDEAYQKAFESYTPDVTAQIIRLDNEDKAK 160 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES-DLHPQFQNLLKK 252 K + + +K ++ + G+ + S +L Q + Sbjct: 161 EVLEKAKAEGADFAQLAKDNSNDDKTKE--------NGGEITFDSASTELPEQVKKAAFA 212 Query: 253 SQNNTTNPYVTQKG-------VEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEK--HEA 302 N + +T G I + K + K L K Sbjct: 213 LDVNGVSDVITATGTQAYSSQFYIIKVTKKTEKSSNIEDYKEKLKTIILTQKQNDSAFVQ 272 Query: 303 EYVKKLRSNAIIH 315 + K A I Sbjct: 273 GVIGKELQAANIK 285 >gi|261209199|ref|ZP_05923591.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium TC 6] gi|289566116|ref|ZP_06446551.1| foldase prsA [Enterococcus faecium D344SRF] gi|260076745|gb|EEW64480.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium TC 6] gi|289162061|gb|EFD09926.1| foldase prsA [Enterococcus faecium D344SRF] Length = 328 Score = 40.0 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 32/320 (10%), Positives = 86/320 (26%), Gaps = 45/320 (14%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + +K + V ++ S +++ T+ G IT D L Sbjct: 1 MQILMKKKSIILAATSALAVLTLAACS-GDTNKDIATMKGGTITVSDFYDEAKL------ 53 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + VQ +I+ + K G V+ + + A++ G + E Q Sbjct: 54 -ESSNQSLVQRMIIYKV---FNNKYGDKVTDKQVDAEYDKQAKSLGDTFES-------QL 102 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + K + + ++ + + ++ Sbjct: 103 EAAGYTKDTYKEYIRNNLAFEAGLKAHVDITDDDLKTAW-----KSFHPEVEAQIIKLSS 157 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF- 246 +++ ++ + ++ GK ++ + P Sbjct: 158 EDEAKDVKKSA----------DDGDDFSKLAKDKSTDTETKEDGGKVKFDSTTTTIPAEV 207 Query: 247 -QNLLKKSQNNTTNPYVTQK------GVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKI- 297 + K ++ T + + ++ G ++ K L T TK+ Sbjct: 208 KEAAFKLKDGEISDVITTTNPTSYATEYYVVKMVKNQNKGNDMDKYKDQLKDIATETKLS 267 Query: 298 -EKHEAEYVKKLRSNAIIHY 316 + + + +A + Sbjct: 268 DNAFTTKVIGEELKDANVKI 287 >gi|311028971|ref|ZP_07707061.1| hypothetical protein Bm3-1_00161 [Bacillus sp. m3-13] Length = 402 Score = 40.0 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 17/238 (7%), Positives = 63/238 (26%), Gaps = 6/238 (2%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN--GEVIT----DG 54 M + S + L F + + ++ T+N GE +T Sbjct: 1 MLHSMKKLFSGKLSRTKLAITLTSFIVFSTILGFGVFHGTKAAVTVNVDGEEVTVRTHAK 60 Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 ++ + L ++ + + + ++ ++++ + + + A Sbjct: 61 TVADILKELDIEVHPEDKLEPSKDTVVSDSMQIVWDPAKEVKLVIDDEEHAMYTTAETVQ 120 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 + + + L + + L G + ++ + + + Sbjct: 121 DFLAERDIDIKEHDKVSQDLNTPLKDNLVIAIEKAFEVTLDVGGEKQQVWSTSTTVADFL 180 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + + L + + + E + ++ + + G Sbjct: 181 EQHDITVNDLDRVEPSLEELVAKDTVVNITRVEKVTDVVEEPIEFGVVTQNDSSLDKG 238 >gi|306825386|ref|ZP_07458726.1| peptidyl-prolyl cis-trans isomerase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432324|gb|EFM35300.1| peptidyl-prolyl cis-trans isomerase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 339 Score = 40.0 bits (91), Expect = 0.48, Method: Composition-based stats. Identities = 29/309 (9%), Positives = 81/309 (26%), Gaps = 37/309 (11%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 KV ++ I V ++ S + + ++ G+VIT+ + + Sbjct: 15 IDKVTLTVKGVNMKKKIMAGAITLLSVATLAACSNSSEGKDLISMKGDVITEHQFFEEVK 74 Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 N +++ + I + ++Q + + V ++ + + Sbjct: 75 ------NNPTAQQVLLNMTIQKVFEQQYGSEVTDKDVDDAVAEEQKKYGDSYNSVLQRAG 128 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 + Q +V+ E E+ + + + Sbjct: 129 MTPET-----------RKAQIRTSKLVELAVK---KAAESELTDEAYQKAFESYTPDVTA 174 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES- 240 ++ ++K + K + + +K ++ + G+ + S Sbjct: 175 QIIRMDNEDKAKEVLEKAKAEGADFAQLAKDNSNDDKTKE--------NGGEITFDSAST 226 Query: 241 DLHPQFQNLLKK-SQNNTTNPYVT------QKGVEYIAICDKRDLGGE-IALKAYLSAQN 292 +L Q + N ++ + + K + K L Sbjct: 227 ELPEQVKKAAFALDVNGVSDVITATGTQAYSNQFYIVKVTKKTEKSSNLEDYKEKLKTII 286 Query: 293 TPTKIEKHE 301 K Sbjct: 287 LTQKQNDSA 295 >gi|194335718|ref|YP_002017512.1| hypothetical protein Ppha_0584 [Pelodictyon phaeoclathratiforme BU-1] gi|194308195|gb|ACF42895.1| conserved hypothetical protein [Pelodictyon phaeoclathratiforme BU-1] Length = 129 Score = 40.0 bits (91), Expect = 0.48, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 24/85 (28%), Gaps = 4/85 (4%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL----QKINGELEKIAVQELIV 82 I + R+ +NG IT ++ + + + + + L+ Sbjct: 14 IAGCSPHAGDGSDGRVAAVVNGVEITQREVDFLYQRASAPGASESVKRDQRRSILAGLVR 73 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFV 107 L Q+ K + + Sbjct: 74 AELLAQQAAKMKLDQSPEFPIALYN 98 >gi|301595770|ref|ZP_07240778.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB059] Length = 91 Score = 40.0 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 35/88 (39%), Gaps = 9/88 (10%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKI---- 68 K L +F ++ S S+A + + ++ VI D+ + +A + Sbjct: 4 KHLKQFFKATTLAVLISSSMHSFAQPTDEVVAIVDNSVILKSDLEQGMAEAAHELQAQKK 63 Query: 69 ----NGELEKIAVQELIVETLKKQEIEK 92 L+ + +LI+ + ++++K Sbjct: 64 EVPPQQYLQFQVLDQLILRQAQLEQVKK 91 >gi|317124069|ref|YP_004098181.1| hypothetical protein Intca_0929 [Intrasporangium calvum DSM 43043] gi|315588157|gb|ADU47454.1| hypothetical protein Intca_0929 [Intrasporangium calvum DSM 43043] Length = 178 Score = 40.0 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 40/132 (30%), Gaps = 1/132 (0%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 L+ V +++ + + +NG+VI + ++ + L+ E I Sbjct: 14 IAATALVGLTAVTLLAGCGFEARQQGAAVVNGQVIHEDEVEETAQQLR-DAKFDFPENIV 72 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 V L+ L + I +S T T + E S+ Q Sbjct: 73 VTALVAAPLLEDAISESKSWEPDATYASAIAAMPGATETTKEFVSAVALIQSGLMTDQDV 132 Query: 137 YLAIQSIWPDVV 148 ++ + Sbjct: 133 QRYRDNLAKADI 144 >gi|289613632|emb|CBI59450.1| unnamed protein product [Sordaria macrospora] Length = 216 Score = 40.0 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 12/162 (7%), Positives = 33/162 (20%), Gaps = 1/162 (0%) Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + + F+S ++ + + + + Sbjct: 19 PKDWEVRHSQSKNLPYYFNSATKTSCWEPPSGTDVDKLKIYMAKFHSSPAQKQQQQPQGK 78 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I +K+ R + Q + ES Sbjct: 79 IRCAHLLVKHNQSRRPSSWRSSNITRTKEEARQILEGIKKSMELESESEPISLGKLARTE 138 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263 + + G Y ++ +F++ + T Sbjct: 139 SDCSSARTEGDLGYFGRGEMQKEFEDAAFALKPGEISGIVDT 180 >gi|84998046|ref|XP_953744.1| hypothetical protein [Theileria annulata] gi|65304741|emb|CAI73066.1| hypothetical protein, conserved [Theileria annulata] Length = 1755 Score = 40.0 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 34/328 (10%), Positives = 91/328 (27%), Gaps = 33/328 (10%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 VFTS + LL + + + S + S+++ ING++I + ++ L Sbjct: 1438 VFTSPEIMLTLLRDFLI-------SPYNLSSVKVGSKVKCKINGQII-ETEVKNVKQTLN 1489 Query: 65 LQ--KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 INGE+ ++ ++ + + + + + N L+ E Sbjct: 1490 GLNFNINGEIPDETLELTELKRVIEDVYKIGHNSVSISYDKKIKWVDCWNLDLNDEIKPK 1549 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDV------VKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + G + + + + + + Sbjct: 1550 LEEVFGKIKSKGLNQEHKDKFLNLIQDPKYGIFEYVEEYGLRSHEWVYEYWRYIPRPISL 1609 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF-----------ASK 225 + + ++ I + + A+ Sbjct: 1610 NEIREKLRNDYYRTPKGVWAEIKLLISNCINFNETSSNYSKIAREVDVNLDNLMINMAND 1669 Query: 226 IHDVSIGKAQY-LLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 + I + + + + + P Q + + N N + G + +R + + + Sbjct: 1670 YNWTVIFEHIWPFIRNFVKPSVQPSSQPHRKNEINQVEQEFGEY--NVSKRRKVNVQEPV 1727 Query: 285 KA--YLSAQNTPTKIE-KHEAEYVKKLR 309 + + + E K + + LR Sbjct: 1728 RRSSRIVQKVEKQVEEVKVRKKTLYNLR 1755 >gi|322374457|ref|ZP_08048971.1| foldase protein PrsA [Streptococcus sp. C300] gi|321279957|gb|EFX56996.1| foldase protein PrsA [Streptococcus sp. C300] Length = 313 Score = 40.0 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 81/313 (25%), Gaps = 41/313 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L + ++ S I G+VIT+ + + N Sbjct: 3 KKLMAGAITLLSVATLAACSNSSEGKDLISMK--GDVITEHQFFEEVK-------NNPTA 53 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + + + ++ + +Q+ D + + ++ S + Sbjct: 54 QQVLLNMTIQKVFEQQYGSEVTDKDVDDAVAEEQKKYGDSYNSVLQRAGMT--------- 104 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + Q +V+ E E+ + + + ++ ++K + Sbjct: 105 -PETRKAQIRTSKLVELAVK---KAAESELTDEAYQKAFESYTPDVTAQIIRLDNEDKAK 160 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES-DLHPQFQNLLKK 252 K + + +K ++ + G+ + S +L Q + Sbjct: 161 EVLEKAKAEGADFAQLAKDNSNDDKTKE--------NGGEITFDSASTELPEQVKKAAFA 212 Query: 253 SQNNTTNPYVTQKG-------VEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEK--HEA 302 N + +T G I + K + K L K Sbjct: 213 LDVNGVSDVITATGTQAYSSQFYIIKVTKKTEKSSNIEDYKEKLKTIILTQKQNDSAFVQ 272 Query: 303 EYVKKLRSNAIIH 315 + K A I Sbjct: 273 GVIGKELQAANIK 285 >gi|118475291|ref|YP_891759.1| putative peptidyl-prolyl cis-trans isomerase D,-like protein [Campylobacter fetus subsp. fetus 82-40] gi|118414517|gb|ABK82937.1| putative peptidyl-prolyl cis-trans isomerase D, homolog [Campylobacter fetus subsp. fetus 82-40] Length = 485 Score = 40.0 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 51/211 (24%), Gaps = 17/211 (8%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI- 60 K L I + T FV F S +S + IT + K Sbjct: 5 MQKHKKYLVVTIWISTIAFVGAGFVGWGAYDLNSNRATS--VAKVGNRNITIQEFQKTYS 62 Query: 61 ------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + Q L++IA+Q LI E L ++ G+ + Sbjct: 63 NLYNYYSSLSEGKFTQEQADEMGLDRIALQRLIQENLFLNYVDDIGLMVSKEELIAALTS 122 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 D S + D K + + ++ N F + + Sbjct: 123 DEGFQVDGKFDKSRYEDTLKRARITPKDFENE--LTNKLLLNKFFDAINLKTNQTDLDIL 180 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 + I + + Sbjct: 181 ASSYFMEDKVSINIIKADKNSISVDENELKD 211 >gi|76800245|ref|ZP_00781993.1| Foldase protein prsA precursor [Streptococcus agalactiae 18RS21] gi|76584547|gb|EAO61412.1| Foldase protein prsA precursor [Streptococcus agalactiae 18RS21] Length = 257 Score = 39.7 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 33/263 (12%), Positives = 69/263 (26%), Gaps = 27/263 (10%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80 L + + + + + T+ G+ IT D ++ K A Q + Sbjct: 11 FLTLMSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVK----------TSKAAQQSM 60 Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + L + + G V+ + + A+ G S + Sbjct: 61 LTLILSRVFDTQYGDKVSDKKVSEAYNKTAKGYGNSFSSAL-------SQAGLTPEGYKQ 113 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 Q +V+ E + Y T + I + V K Sbjct: 114 QIRTTMLVEYAVKEAAKKELTEA------NYKEAYKNYTPETSVQVIKLDAEDKAKSVLK 167 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260 +K ++ K+ + S G L + + F+ + + Sbjct: 168 DVKADGADFAKIAKEKTTATDKKVEYKFDSAG--TTLPKEVMSAAFKLDKNGVSDVVSTV 225 Query: 261 YVTQK--GVEYIAICDKRDLGGE 281 T I + DK + + Sbjct: 226 DSTTYKTSYYIIKVTDKTEKKSD 248 >gi|332706783|ref|ZP_08426844.1| hypothetical protein LYNGBM3L_23620 [Lyngbya majuscula 3L] gi|332354667|gb|EGJ34146.1| hypothetical protein LYNGBM3L_23620 [Lyngbya majuscula 3L] Length = 318 Score = 39.7 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 19/236 (8%), Positives = 59/236 (25%), Gaps = 2/236 (0%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 I + E K+ + ++ D + Sbjct: 67 IEVSAGTIESLKTTWQRQWGREPLPQELESLVDNYVRDEVLYQEALALGLDQNDLIVRRR 126 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + D + + A + + +++ + Sbjct: 127 VVQKMQFLVEDVSALREPSDQVLQAYLGEHADRYTIPGKFSFAQIYFSREMRRDRTDAEA 186 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260 R + + KL + ++ A+ L + Q + ++N P Sbjct: 187 RDLLNQLQANPNLERFQKLGDRSMLPITYNLASAEILSNTFGGSFGQEMAGVTENGWQGP 246 Query: 261 YVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + G + + D +K + + ++ + ++ ++LR + Sbjct: 247 FHSAYGSHLVYVSDIEPGHNATLAEVKRDVRRDWMRDQRQQLDEQFYQQLRDRYTV 302 >gi|329120542|ref|ZP_08249206.1| hypothetical protein HMPREF9123_2637 [Neisseria bacilliformis ATCC BAA-1200] gi|327461281|gb|EGF07613.1| hypothetical protein HMPREF9123_2637 [Neisseria bacilliformis ATCC BAA-1200] Length = 248 Score = 39.7 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 5/77 (6%) Query: 235 QYLLESDLHPQFQNLL-KKSQNNTT-NPYVTQKGVEYIAI---CDKRDLGGEIALKAYLS 289 ++ + L P+F + + P Q + I + LK ++ Sbjct: 166 GFVALAQLPPEFAAAAATMQRGQISHKPVAFQGSYYLLKIAATEQAENAPPFEELKDQIA 225 Query: 290 AQNTPTKIEKHEAEYVK 306 A K ++ A +K Sbjct: 226 ALLKQRKAQEQIATLLK 242 >gi|253989301|ref|YP_003040657.1| hypothetical protein PAU_01821 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780751|emb|CAQ83913.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 303 Score = 39.7 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 26/302 (8%), Positives = 77/302 (25%), Gaps = 21/302 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K ++D +K +I C + I+S + + I +++++ Sbjct: 1 MMRKNIIGITDIMKFFIAIKSFLITCGLLILSGCASVQQTPTL------QILSPELTQQG 54 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 ++ L+ N + +L N ++ L + Sbjct: 55 VVIDLKTGNVLTPDELLNQL------ASHQRIIVGEKHDNPYHHQIELWLVQQLLLKREP 108 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 S L + D + + + ++ ++ + + + + Sbjct: 109 GSVLLEMITPDQQERVNKVKSWL-----QTKPTVRESRIKDLLEWHAGWPWELYGELVME 163 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 + ++ + + + + + A+ I D G+ S Sbjct: 164 LMYQPYPLLAANLARSEIKAAYNNPPVLQGNISVSEDVKAQIAATIKDAHGGEITERQLS 223 Query: 241 DLHPQFQNLLKKSQNNTTN-PYV---TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 + Q ++ P G + +++ + K Sbjct: 224 AMTTIQQMRDRRMAEQLLKAPVPATLIAGGYHATKVMGVPLHIKDLSPREDFVVLIIAEK 283 Query: 297 IE 298 Sbjct: 284 AN 285 >gi|254511419|ref|ZP_05123486.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11] gi|221535130|gb|EEE38118.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11] Length = 613 Score = 39.7 bits (90), Expect = 0.63, Method: Composition-based stats. Identities = 33/360 (9%), Positives = 77/360 (21%), Gaps = 82/360 (22%) Query: 31 VSYKSWAMSSRIRTTINGEVITDG----DISKRIALLKLQKING---------ELEKIAV 77 S + R + E ++ ++ + I ++ Q L+++A+ Sbjct: 27 FGATSLTGTVRTVAQVGDESVSVDAYFRELQREIRAVEAQTGQAMQIAQAHDLGLDQLAL 86 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 LI E+ + GI+ + VQ G++ Q Sbjct: 87 SRLIALAALDNEVAQLGISIGDENLQNEIVQIPAFQGVNGTFDREAYRFQLEQVGMTDAE 146 Query: 138 LAIQSIWPD---VVKNDFMLKYGN-----------------------------------L 159 +V+ + Sbjct: 147 FESDLRKESARTIVQGAVIGGVEMPLALTEALANYVLARRSFTLATLSAEALETPVPQPT 206 Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL--------- 210 + +I A + + R + L + + + + Sbjct: 207 DAQIQAFYDENTDRFTLPRTKRLTYAILSPEMLLDAVEIDEDALRRLYDQRAGQYLQPER 266 Query: 211 ----RLPKDCNKLEKFASKIHDVSIG----------------KAQYLLESDLHPQFQNLL 250 RLP + A +V + DL + Sbjct: 267 RLVERLPYPSEEAATEALAQLEVGGADFEQLVRDRQLELSDVDLGDVTREDLGDAADTVF 326 Query: 251 KKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 ++ P T G I + + L + + + + + Sbjct: 327 AAGIDDVVGPLPTVFGPALFRINGTLAENNVSFEEARPELREELAADRARRLIEAQAEDI 386 >gi|157869307|ref|XP_001683205.1| hypothetical protein [Leishmania major strain Friedlin] gi|68224089|emb|CAJ04157.1| putative peptidyl-prolyl cis-trans isomerase [Leishmania major strain Friedlin] Length = 440 Score = 39.7 bits (90), Expect = 0.63, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 1/44 (2%) Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICD 274 G + + + + K + + P TQ G+ + CD Sbjct: 397 GDLGVVEKGTFADEIDEAAFKLRRGEVSAPVETQLGIHLLYRCD 440 >gi|254511696|ref|ZP_05123763.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11] gi|221535407|gb|EEE38395.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11] Length = 73 Score = 39.7 bits (90), Expect = 0.63, Method: Composition-based stats. Identities = 7/64 (10%), Positives = 14/64 (21%), Gaps = 2/64 (3%) Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 P + G I + +++ + E + L N Sbjct: 1 MGEWAGPIQSGYGKHLIQVLAVEPGRLPPLNDIRSAVLQDWQRAMGEDLAQAQYETLADN 60 Query: 312 AIIH 315 I Sbjct: 61 YTIE 64 >gi|294622205|ref|ZP_06701265.1| foldase protein PrsA [Enterococcus faecium U0317] gi|291598247|gb|EFF29340.1| foldase protein PrsA [Enterococcus faecium U0317] Length = 323 Score = 39.7 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 33/316 (10%), Positives = 85/316 (26%), Gaps = 45/316 (14%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K T V ++ S +++ T+ G IT D L Sbjct: 1 MKKNTIILAATSALAVLTLAACS-GDTNKDIATMKGGTITVSDFYDEAKL-------ESS 52 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 + VQ +I+ + K G V+ + + A++ G + E Q Sbjct: 53 NQSLVQRMIIYKV---FNNKYGDKVTDKQVDAEYDKQAKSLGDTFES-------QLEAAG 102 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 + K + + ++ + + ++ +++ Sbjct: 103 YTKDTYKEYIRNNLAFEAGLKAHVDITDDDLKTAW-----KSFHPEVEAQIIKLSSEDEA 157 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF--QNL 249 ++ + ++ GK ++ + P + Sbjct: 158 KDVKKSA----------DDGDDFSKLAKDKSTDTETKEDGGKVKFDSTTTTIPAEVKEAA 207 Query: 250 LKKSQNNTTNPYVTQK------GVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKI--EKH 300 K ++ T + + ++ G ++ K L T TK+ Sbjct: 208 FKLKDGEISDVITTTNPTSYATEYYVVKMVKNQNKGNDMDKYKDQLKDIATETKLSDNAF 267 Query: 301 EAEYVKKLRSNAIIHY 316 + + + +A + Sbjct: 268 TTKVIGEELKDANVKI 283 >gi|149927433|ref|ZP_01915688.1| hypothetical protein LMED105_01067 [Limnobacter sp. MED105] gi|149823925|gb|EDM83150.1| hypothetical protein LMED105_01067 [Limnobacter sp. MED105] Length = 267 Score = 39.7 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 79/303 (26%), Gaps = 51/303 (16%) Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEK 74 F+ + I + + +S N V+T+ + +++ Q + + Sbjct: 8 LGFIAVATLIGVLEWHSGEQAAS------NELVVTEAQRAFVREQVLQAGTQANSSASFE 61 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A+ I E + +E K G+ D V VQ R + + Q Sbjct: 62 QAMATYIDEEILYREGLKLGLEKDDLIVKRRVVQKMRFLLEDMTPIAPPTEAQLQTWL-G 120 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + Q+ V + F + + ++ + + D++L + Sbjct: 121 QNAQRYQTEQTIVFDHHFFSRGKRGDEAFYHAGIARDDLLAGQKVTSDPFPLQTDSELLS 180 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 + + K G DL Sbjct: 181 RERIAKEF-----------------------------GVITSATIFDLP----------L 201 Query: 255 NNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + P + GV + K + L + + E + LR+ Sbjct: 202 DEWSPPVQSPLGVHLFKVSQKNAGRTMTLEEAGSQLRSDLIAAQREAVNDAGLAALRATY 261 Query: 313 IIH 315 I Sbjct: 262 TIK 264 >gi|331266535|ref|YP_004326165.1| foldase protein PrsA [Streptococcus oralis Uo5] gi|326683207|emb|CBZ00825.1| foldase protein PrsA [Streptococcus oralis Uo5] Length = 313 Score = 39.7 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 80/313 (25%), Gaps = 41/313 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L + ++ S I G+VIT+ + + N + Sbjct: 3 KKLMAGAITLLSVATLAACSNSSEGKDLISMK--GDVITEHQFFEEVK------NNPTAQ 54 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++ + I + ++Q + + V ++ + + + Sbjct: 55 QVLLNMTIQKVFEQQYGSEVTDKDVDDAVAEEQKKYGDSYNSVLQRAGMTPET------- 107 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 Q +V+ E E+ + + ++ ++K + Sbjct: 108 ----RKAQIRTSKLVELAVK---KAAESELTDEAYQKAFEAYTPDVTAQIIRMDNEDKAK 160 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES-DLHPQFQNLLKK 252 K + + +K ++ + G+ + S +L Q + Sbjct: 161 EVLEKAKAEGADFAQLAKDNSNDDKTKE--------NGGEITFDSASTELPEQVKKAAFA 212 Query: 253 SQNNTTNPYVTQKG-------VEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEK--HEA 302 N + +T G I + K + K L K Sbjct: 213 LDVNGVSDVITATGTQAYSSQFYIIKVTKKTEKSSNIEDYKEKLKTIILTQKQNDSAFVQ 272 Query: 303 EYVKKLRSNAIIH 315 + K A I Sbjct: 273 GVIGKELQAANIK 285 >gi|149913756|ref|ZP_01902288.1| peptidyl-prolyl cis-trans isomerse D, putative [Roseobacter sp. AzwK-3b] gi|149812040|gb|EDM71871.1| peptidyl-prolyl cis-trans isomerse D, putative [Roseobacter sp. AzwK-3b] Length = 613 Score = 39.7 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 9/132 (6%), Positives = 24/132 (18%), Gaps = 9/132 (6%) Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 + + ++ + + + G + Sbjct: 474 WRQQATVAALTEKAEPLVADLRNGRDFADLGLDTLDAQNLTRQG----FQPDTPTEFIET 529 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT----KIEKHEAEY 304 + Q V + + R + A L + Sbjct: 530 VFDMEQGGI-ALIEGTTRVFILRLDAVRPPSSDNEELARLRTALRDQSASSMAQDFYQLL 588 Query: 305 VKKLRSNAIIHY 316 +R+ A I Sbjct: 589 ATDIRTRAEIEI 600 >gi|170076538|ref|YP_001733177.1| hypothetical protein SYNPCC7002_G0068 [Synechococcus sp. PCC 7002] gi|169887400|gb|ACB01108.1| conserved hypothetical protein [Synechococcus sp. PCC 7002] Length = 244 Score = 39.7 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 23/256 (8%), Positives = 66/256 (25%), Gaps = 16/256 (6%) Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 ++++ LE+ + L+V+ ++ + I T + + ++ + F Sbjct: 1 MRIRIREQNLEQDDLIRLLVQYQLLPQLAREIILDQEITSLEEIEYNPEDIQIAIQQFVK 60 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 L + D+ + + N ++ R Sbjct: 61 KLQLKSESQLQIW------LQNNDLQPEQLSAIATRPLKIEKLKQVRWGNNIEAYFMERK 114 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 L + +++ + G + S Sbjct: 115 DQLDRMIYSLIRTQDAGIAQELYFRILDDATAFAPLAGQYSQGAEAQTGGLVGPVEMSTP 174 Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301 HPQ L P + + + + + ++ I + Sbjct: 175 HPQITAVLKNAQPGALKAPMKIGEWYVVLRLEEFLPAQLDELMR--------QRLINEQF 226 Query: 302 AEYVKK-LRSNAIIHY 316 +++K+ +++ I Y Sbjct: 227 EKWLKESVKNQLTIQY 242 >gi|254373010|ref|ZP_04988499.1| conserved hypothetical protein [Francisella tularensis subsp. novicida GA99-3549] gi|151570737|gb|EDN36391.1| conserved hypothetical protein [Francisella novicida GA99-3549] Length = 477 Score = 39.7 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 15/162 (9%), Positives = 42/162 (25%), Gaps = 7/162 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI-RTTINGEVITDGDISKR 59 M L + + IF I + + + SSR + I+ + Sbjct: 1 MLQSFNDRLKGPFTWIVVISISFIFVISGMTFFFTNIGSSRAYVAKVGDNEISSQQFLQY 60 Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 E ++ + ++I + L + ++ I + + + Sbjct: 61 AQ----SATTEEQKRAILSQMIDQYLILADAQRHDIVVSKLALQSAIFTNPMFF--DKDG 114 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 S + + Q + ++ + + Sbjct: 115 KFSAEKLKQVVAYLGGMDKLEQILAQNIQATIIPKTIVDTSI 156 >gi|162450855|ref|YP_001613222.1| hypothetical protein sce2583 [Sorangium cellulosum 'So ce 56'] gi|161161437|emb|CAN92742.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 327 Score = 39.7 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 22/293 (7%), Positives = 70/293 (23%), Gaps = 7/293 (2%) Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLK 86 ++ + + + + + + +++ A Q + AV++ + Sbjct: 22 VLSTSARGAAPLPPDVAARVGASDVAVDSVARIAA--AQQIPPAQARDAAVRDALWAAEA 79 Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146 + + + A + D++ + Sbjct: 80 RARGLEQEPDVRREISLVLARRMLHRLKEEAANAGPVTDEELRVATERHWLDLDRPEGYR 139 Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV--QKRIKD 204 V L E K I R V + + Sbjct: 140 TVHAVVKLPEDAGEATRDRAKAIADAIRTAVLSSREVAQRTEPPRAAGTPQPPPDPAAEA 199 Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVT 263 + +P + ++ A + + + ++ + T P + Sbjct: 200 FISAAKGVPAEGFEVVAQALSPVTEAGRVLTPETQQFDPAFSRAAASLVARGDLTAPVTS 259 Query: 264 QKGVEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKLRSNAII 314 GV I + ++ + + + + ++ +++ R I Sbjct: 260 AFGVHVIMLLERIPAQVVPVEERRGLVHDEVVADRARAAQSRFLEVARREPKI 312 >gi|323453183|gb|EGB09055.1| hypothetical protein AURANDRAFT_7806 [Aureococcus anophagefferens] Length = 111 Score = 39.7 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 6/63 (9%), Positives = 16/63 (25%), Gaps = 2/63 (3%) Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVE-Y 269 + +K + G + F++ + + T GV Sbjct: 49 AAAFRDACKKRSDCGSCRESGDLGDFQRGQMQKPFEDATFALAVGEMSGVVDTDSGVHAI 108 Query: 270 IAI 272 + + Sbjct: 109 LRL 111 >gi|218248033|ref|YP_002373404.1| hypothetical protein PCC8801_3275 [Cyanothece sp. PCC 8801] gi|257060643|ref|YP_003138531.1| hypothetical protein Cyan8802_2846 [Cyanothece sp. PCC 8802] gi|218168511|gb|ACK67248.1| conserved hypothetical protein [Cyanothece sp. PCC 8801] gi|256590809|gb|ACV01696.1| hypothetical protein Cyan8802_2846 [Cyanothece sp. PCC 8802] Length = 256 Score = 39.3 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 20/251 (7%), Positives = 68/251 (27%), Gaps = 21/251 (8%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 ++ + I LK + + + ++E I+ + ++ ++ Q + Sbjct: 8 SIEVDELINCLKKELKIKDFCQQLLEERIINKV---SQARNLTVTETEIQTEADKQRCQM 64 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 A D ++L++Q I +++ + + + + ++ F + N ++ Sbjct: 65 KLEKAADTLAWLEEQMITPENWEDGIRDRLLRAKLAESLFSQNVDKFFAQNKLNFDQVVL 124 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + + + + F Q + + +L G Sbjct: 125 YQIIIPYEKLAWEIFYQIEEEEMSFYQAAHLYDIDEKRKLH-----------------CG 167 Query: 233 KAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 L ++ + +P K + + + + + Sbjct: 168 YEGKLYRWEIHPNLAAAIFAAQPGEIISPIKIDKQYHILLVEKFISAELTPEIYQEILNK 227 Query: 292 NTPTKIEKHEA 302 + Sbjct: 228 MFDEWLNSELN 238 >gi|332710150|ref|ZP_08430103.1| hypothetical protein LYNGBM3L_48230 [Lyngbya majuscula 3L] gi|332351108|gb|EGJ30695.1| hypothetical protein LYNGBM3L_48230 [Lyngbya majuscula 3L] Length = 243 Score = 39.3 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 20/192 (10%), Positives = 52/192 (27%), Gaps = 4/192 (2%) Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 + + FL+K + D KQ Q ++ +E E Sbjct: 54 QAYQQFLEKNQLIDETAKQAWLKQRGMNPAQLEALAVRSILIEKYKQQTWSHKLESYFLE 113 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 + + ++ G Q+ +E + +++ + G + Sbjct: 114 RKGQLDRVIYSLIRTKDPGVAQEIYFRIQEGEESF---ADLAREYSQGPEAQTGGLIGPV 170 Query: 238 LESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 S Q L P + + + + + +++ L + T Sbjct: 171 ELSVPHPALAQMLRLSQPGQLFPPTRLGEWLLIVRLEKFMPAQLDDSMRQRLLNECFSTW 230 Query: 297 IEKHEAEYVKKL 308 + + + + L Sbjct: 231 LSEQLNQQLAAL 242 >gi|308183127|ref|YP_003927254.1| conserved hypothetical secreted protein [Helicobacter pylori PeCan4] gi|308065312|gb|ADO07204.1| conserved hypothetical secreted protein [Helicobacter pylori PeCan4] Length = 487 Score = 39.3 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 35/320 (10%), Positives = 88/320 (27%), Gaps = 21/320 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK +EL + +K +EKS DS A + GL A Sbjct: 61 RRLKDAYAESIPN---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIRKTSVFQKDGVFNEELYKNILKQSHYRPKHFEESVERLLILQKISALFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPNDVKISLNEEEMKKYYESHKKDFKKPISFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPNLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EKHEAEYVKKLRSNAIIHYY 317 + L+ A + Y Sbjct: 284 NEKALRSYIALK-KANVQNY 302 >gi|189219654|ref|YP_001940295.1| Peptidyl-prolyl cis-trans isomerase [Methylacidiphilum infernorum V4] gi|189186512|gb|ACD83697.1| Peptidyl-prolyl cis-trans isomerase [Methylacidiphilum infernorum V4] Length = 507 Score = 39.3 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 22/286 (7%), Positives = 64/286 (22%), Gaps = 30/286 (10%) Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 ++ + ++ + I L + G+ + L + + V + + Sbjct: 101 IVPEEEVVRFIQQLPFLQKEGKYD----ASLYKRFVSSFLTPQGISEERFLQVMHEELVI 156 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + + + + + ++ ++ E+E Sbjct: 157 GKVKKALVAPIEVIPKEVDEIYAMTFGQVRVVLLRMNLEDFKKNIQIQPEEIEKEYKSHP 216 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + P ++ + + + + + Sbjct: 217 KDPDYYTPEKRKAGFVFFPFPAELQNLKGKELEEAKRKILEQAEDFAIEASRQVENSAAN 276 Query: 230 -----SIGKAQYLLESDLHPQFQNLLKKSQNN-------------TTNPYVTQKGVEYIA 271 Y L + P T KG + Sbjct: 277 FEQLAKEKNLSYQLTEPFPADKPPSAIVEPEKFSKTVFGLSLDKAVSEPVETSKGYYVVV 336 Query: 272 IC--DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +K L +K+ + + K +K +K +A I Sbjct: 337 LLNVEKGSLRPFDEIKSTVEEKL---KRKKAFEALFQK---SAQIE 376 >gi|99080985|ref|YP_613139.1| putative peptidyl-prolyl cis-trans isomerse D [Ruegeria sp. TM1040] gi|99037265|gb|ABF63877.1| putative peptidyl-prolyl cis-trans isomerse D [Ruegeria sp. TM1040] Length = 611 Score = 39.3 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 8/73 (10%), Positives = 27/73 (36%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + K + ++F + + + ++R T+ ++ D ++ + + Sbjct: 1 MKKLSKTFVWILMGLLFVGLAGFGAINVSGTTRTLATVGDATVSVDDYARALQQEQRAIQ 60 Query: 69 NGELEKIAVQELI 81 + I + +LI Sbjct: 61 AQSGQSIPLSQLI 73 >gi|186685932|ref|YP_001869128.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nostoc punctiforme PCC 73102] gi|186468384|gb|ACC84185.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nostoc punctiforme PCC 73102] Length = 266 Score = 39.3 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 16/189 (8%), Positives = 42/189 (22%), Gaps = 8/189 (4%) Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 F + + Q ++ F + +E +Y Sbjct: 62 EQFYQQWDLNSEEKIQSWCLRYGLTQEQLELFATRKLRVEKFKQITWGHQLESYFLKYKR 121 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240 + N+G + E +++ + G + Sbjct: 122 HFDKVIYSLIRTDNRGTANELYFRITEGEQSF---AELAHEYSQGPEAETSGIIGPVEVG 178 Query: 241 DLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299 + P F LL P + + + + ++ + E Sbjct: 179 TITPNFAQLLCTSQVGIVQAPVAFGESWVIVRVEKFITAQLD----NFMRQRLLQENFET 234 Query: 300 HEAEYVKKL 308 + + +L Sbjct: 235 WFQQQLSQL 243 >gi|237752705|ref|ZP_04583185.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gi|229376194|gb|EEO26285.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 485 Score = 39.3 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 60/222 (27%), Gaps = 19/222 (8%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 K L I + F+ F S+ + + + + IT + + A Sbjct: 5 MQKHKKYLIVTIWISAIAFLGAGFVGWGAYSFSNTSNA---AAVVGDRQITIDRLQREYA 61 Query: 62 LL-------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 L Q +E+ A+ LI L G+ + Sbjct: 62 RLYNVYNQLFNGNLDNEQAKKLGIEEQALNTLISRALMLNYAHDVGLRISQEEIIQTLTA 121 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 D + + K + + K D +L+ +EI Sbjct: 122 MDIFQNNGKFDETIYKRLLADNQMRPKDFEEELGEGILLQKLDALLEIPLTPLEIQT--- 178 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 + + ++L VL + ++K ++ ++ Sbjct: 179 ISEAVFSEDHLKIQVLNDSEITFNPTEEEIKKYWEENKDIYQ 220 >gi|42527165|ref|NP_972263.1| basic membrane protein, putative [Treponema denticola ATCC 35405] gi|41817589|gb|AAS12174.1| basic membrane protein, putative [Treponema denticola ATCC 35405] gi|325474208|gb|EGC77396.1| basic membrane protein [Treponema denticola F0402] Length = 358 Score = 39.3 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 37/295 (12%), Positives = 87/295 (29%), Gaps = 26/295 (8%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKLQKIN---GELEK 74 + I +V + S ++ +N E IT G + K + + Q N + +K Sbjct: 5 IFIAVMLVGFLGLLSAQNDLQVIAQVNLSKKEPITLGQLKKLVKFAESQGGNIATNDDKK 64 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA------------EDFSS 122 + ++ L+ L Q EK I ++ V+ F ++ S Sbjct: 65 LVLESLMRTKLLVQAAEKENIKISNSQVDNAFNDVLSQYVKYPITESEFAKLIKQKENIS 124 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + + L +++N K+ +++ Sbjct: 125 LDEFMKKQTGCTVEELKKIIKDNLIIQNYIASKHQAEIVKMATPTDAQIRSYYEMKKGEL 184 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA----QYLL 238 V + K ++ ++ K +++ A+ + G Y+ Sbjct: 185 VRPDMVKMLFVAVKKEGKDKEEIDKINELHKKVKKNIKEIANIKKNAEAGNYVAQEGYIP 244 Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293 ++ Q N ++ ++ I D+ D + L+A+ Sbjct: 245 KTAEGAQLLNATPEALME----IFSKDVNYIFDIQDRVDSRQFFVITEKLNAKIL 295 >gi|299134975|ref|ZP_07028166.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Afipia sp. 1NLS2] gi|298589952|gb|EFI50156.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Afipia sp. 1NLS2] Length = 617 Score = 39.3 bits (89), Expect = 0.74, Method: Composition-based stats. Identities = 27/254 (10%), Positives = 66/254 (25%), Gaps = 12/254 (4%) Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 + + + I + +ELI + E K+ ++ + + + + Sbjct: 130 YSYTEQRYIAEQRRLTLRRELIGSIVAGVEPTKTQ--IEAISRFQDEQRTIDYAKIGPDQ 187 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + N + + Q P+ K + E+ + + Y Sbjct: 188 AGTIEAPSPDALNTYFEAHKAQFRAPEYRKVVY---LTLSPDELAKKVVVSDDDARKVYD 244 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI-GKAQYLL 238 R + P + + + +DA ++ E A + S + Sbjct: 245 SRRADYVKP--DRREVQQIAFQSEDAAKAARAKIAGGMSFEDLAKDMKLTSGDMNLGLVS 302 Query: 239 ESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 E L + N + P + + E ++ Sbjct: 303 EKSLGDPIIAKAAFALPLNEVSQPVKGALATVLLKVTKIEPGSTE--AFEKVAPAIKKEI 360 Query: 297 IEKHEAEYVKKLRS 310 E+ K+R+ Sbjct: 361 AEQRVRTDFDKMRN 374 Score = 38.9 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 14/158 (8%), Positives = 38/158 (24%), Gaps = 14/158 (8%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE-- 73 + +++ F + I + T+ I Q Sbjct: 3 VLFGILIVSFAVWGIADIFKGSTQ-TTLATVGNTDIPLEQFRSAYTDKLQQISRQIRRPL 61 Query: 74 -----------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 + +Q+ I ET +E + G+ + G + + + Sbjct: 62 TPTQGRAFGIDRQLLQQTIAETALDEEGRRMGLRMSDAEIVRTISSDPTFAGPNGKFDPA 121 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 ++ +Q + + + +E Sbjct: 122 RFAMAMRDYSYTEQRYIAEQRRLTLRRELIGSIVAGVE 159 >gi|257899550|ref|ZP_05679203.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium Com15] gi|257837462|gb|EEV62536.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium Com15] Length = 340 Score = 39.3 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 33/317 (10%), Positives = 79/317 (24%), Gaps = 39/317 (12%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 + +K + V ++ S +++ T+ G IT D L Sbjct: 1 MQTLMKKKSIILAATSALAVLTLAACS-GDTNKDIATMKGGTITVSDFYDEAKL------ 53 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + VQ +I+ + K G V+ + + A++ G + E Q Sbjct: 54 -ESSNQSLVQRMIIYKV---FNNKYGDKVTDKQVDAEYDKQAKSLGDTFES-------QL 102 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + K + + ++ + Sbjct: 103 ETAGYTKDSYKEYIRNNLAFEAGLKAHVDITDDDLKTAWESFHPE------------VEA 150 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 + K +K + + K + D K + + Sbjct: 151 QIIKLSSEDEAKDVKKSADDGDDFSKLAKDKSTDSETKEDGGKVKFDSTTTTIPAEVKEA 210 Query: 249 LLKKSQNNTTNPYVTQKG------VEYIAICDKRDLGGEIAL-KAYLSAQNTPTKI--EK 299 K ++ + + ++ G ++ K L T TK+ Sbjct: 211 AFKLKDGEVSDVITATNTTSYATEYYVVKMVKNQNKGNDMDKYKDQLKEIATETKLSDNT 270 Query: 300 HEAEYVKKLRSNAIIHY 316 + + + +A + Sbjct: 271 FTTKVIGEELKDANVKI 287 >gi|86153477|ref|ZP_01071681.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843203|gb|EAQ60414.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni HB93-13] Length = 496 Score = 39.3 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 23/258 (8%), Positives = 66/258 (25%), Gaps = 15/258 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------- 63 + + + + + +Y S T+ E I + R + Sbjct: 14 VTIWVSTIAFVGAGFLGWGAYDFNLNRSSSVATVGNEKIGFSEFDTRYRQILSYYNQISN 73 Query: 64 ----KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 ++ IA+ L+ + L + GI + N + + + Sbjct: 74 GALTPENAEQLGIKNIALSSLVEDKLLLNFAKDLGIGVNENEILQKLANTREFQDPTGDF 133 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + + +N + Q + + N+ + K + +++ L Sbjct: 134 NKTIYYELLNANNLTPKDYETQLANEVITDKL--NQIFNIPSKDEELKMLASSYFMQDAL 191 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + N N+ ++K + +E + + + + Sbjct: 192 SIAKIDYDKKNIKINEEDLKKLWNEHKEDYKTKKIYEISTYFLSVSNEKIDDKELEKFYN 251 Query: 240 SDLHPQFQNLLKKSQNNT 257 D + + Sbjct: 252 QDENKLKYKDFAGKVMDF 269 >gi|157414981|ref|YP_001482237.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni 81116] gi|157385945|gb|ABV52260.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni 81116] gi|307747618|gb|ADN90888.1| Peptidyl-prolyl cis-trans isomerase D,-like protein [Campylobacter jejuni subsp. jejuni M1] gi|315931892|gb|EFV10847.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni 327] Length = 496 Score = 39.3 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 23/258 (8%), Positives = 66/258 (25%), Gaps = 15/258 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------- 63 + + + + + +Y S T+ E I + R + Sbjct: 14 VTIWVSTIAFVGAGFLGWGAYDFNLNRSSSVATVGNEKIGFSEFDTRYRQILSYYNQISN 73 Query: 64 ----KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 ++ IA+ L+ + L + GI + N + + + Sbjct: 74 GALTPENAEQLGIKNIALSSLVEDKLLLNFAKDLGIGVNENEILQKLANTREFQDPTGDF 133 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + + +N + Q + + N+ + K + +++ L Sbjct: 134 NKTIYYELLNANNLTPKDYETQLANEVITDKL--NQIFNIPSKDEELKMLASSYFMQDAL 191 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + N N+ ++K + +E + + + + Sbjct: 192 SIAKIDYDKKNIKINEEDLKKLWNEHKEDYKTKKIYEISTYFLSVSNEKIDDKELEKFYN 251 Query: 240 SDLHPQFQNLLKKSQNNT 257 D + + Sbjct: 252 QDENKLKYKDFAGKVMDF 269 >gi|119487787|ref|ZP_01621296.1| hypothetical protein L8106_29935 [Lyngbya sp. PCC 8106] gi|119455620|gb|EAW36757.1| hypothetical protein L8106_29935 [Lyngbya sp. PCC 8106] Length = 247 Score = 39.3 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 26/253 (10%), Positives = 64/253 (25%), Gaps = 26/253 (10%) Query: 46 IN--GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 +N G +T+ +I ++ LK Q E + + + + + E+ Sbjct: 2 VNKSGTSVTNDEI---VSFLKEQLQYKEFCQKILSQ---RAIHRAVQEREITVTSDEIQA 55 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 Q A D ++L Q I + ++ + + + + F + + Sbjct: 56 EADRQRLVRRLEKASDTLAWLTDQRISPDDWEAGIQQGILAKKLAETLFASEVEKYFAQN 115 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + +++ + R + + F E + R Sbjct: 116 RLDYEQVLLYQIIVPYERLARELFYQIEEEEISFYHAAHLYDIEKKRREL---------- 165 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282 G L L + + P+ T G + + Sbjct: 166 -------CGYEGQLNRRHLKADIAALVFGATPGEIIGPHQTDLGYHLFKVEEFIPAELTE 218 Query: 283 ALKAYLSAQNTPT 295 + + Sbjct: 219 EYSQKIIQKLFKE 231 >gi|188995374|ref|YP_001929626.1| putative peptidyl-prolyl cis-trans isomerase [Porphyromonas gingivalis ATCC 33277] gi|188595054|dbj|BAG34029.1| putative peptidyl-prolyl cis-trans isomerase [Porphyromonas gingivalis ATCC 33277] Length = 715 Score = 39.3 bits (89), Expect = 0.78, Method: Composition-based stats. Identities = 23/188 (12%), Positives = 53/188 (28%), Gaps = 14/188 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 K+ I ++ I + S + INGE I D +R+ Sbjct: 4 LEKIRGKAGLLIVVVGVALFAFIIGDFLRSGSTFFRQSQEVVLDINGEKIKIYDYQQRLK 63 Query: 62 LLKLQ----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 ++ + + L Q+ + + + Q+ +K G+T + + Sbjct: 64 AMEKRAEQSGTKITDEQRASLNNQLAQQYVQDYVLGQQADKLGLTVSPEELLALIIGDGV 123 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAI----QSIWPDVVKNDFMLKYGNLEMEIPANK 167 + A+ F S G +L Q + ++ + + + Sbjct: 124 QPSMFAQQFFSRFGINGSDRAAVNDFLNHISDKQIKSQPAEQQGYLYEIQSEWQSVEKQI 183 Query: 168 QKMKNITV 175 + Sbjct: 184 ADTRMQEK 191 >gi|227552654|ref|ZP_03982703.1| peptidylprolyl isomerase [Enterococcus faecium TX1330] gi|293378656|ref|ZP_06624815.1| putative foldase protein PrsA [Enterococcus faecium PC4.1] gi|227178280|gb|EEI59252.1| peptidylprolyl isomerase [Enterococcus faecium TX1330] gi|292642696|gb|EFF60847.1| putative foldase protein PrsA [Enterococcus faecium PC4.1] Length = 336 Score = 39.3 bits (89), Expect = 0.80, Method: Composition-based stats. Identities = 30/309 (9%), Positives = 75/309 (24%), Gaps = 38/309 (12%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 + + + + +++ T+ G IT D L + Sbjct: 4 KSIILAATSALAVLTLAACSGDTNKDIATMKGGTITVSDFYDEAKL-------ESSNQSL 56 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 VQ +I+ + K G V+ + + A++ G + E Q + K Sbjct: 57 VQRMIIYKV---FNNKYGDKVTDKQVDAEYDKQAKSLGDTFES-------QLETAGYTKD 106 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + ++ + + Sbjct: 107 SYKEYIRNNLAFEAGLKAHVDITDDDLKTAWESFHPE------------VEAQIIKLSSE 154 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 K +K + + K + D K + + K Sbjct: 155 DEAKDVKKSADDGDDFSKLAEDKSTDSETKEDGGKVKFDSTTTTIPAEVKEAAFKLKDGE 214 Query: 257 TTNPYVTQKG------VEYIAICDKRDLGGEIAL-KAYLSAQNTPTKI--EKHEAEYVKK 307 ++ + + ++ G ++ K L T TK+ + + + Sbjct: 215 VSDVITATNTTSYATEYYVVKMVKNQNKGNDMDKYKDQLKEIATETKLSDNAFTTKVIGE 274 Query: 308 LRSNAIIHY 316 +A + Sbjct: 275 ELKDANVKI 283 >gi|307266612|ref|ZP_07548142.1| conserved hypothetical protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306918343|gb|EFN48587.1| conserved hypothetical protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 240 Score = 39.3 bits (89), Expect = 0.82, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 45/155 (29%), Gaps = 9/155 (5%) Query: 38 MSSRIRTTINGEVITDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 I +NG I + R L L + ++ + +L+ E +K+ K + Sbjct: 61 NEGDIIAEVNGIPIYKNEFELRKGLTLASEGQVNDINNFVLSKLVREKVKEYLAMKYNLK 120 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL--------AIQSIWPDVV 148 +N + + + S E + + +Y ++ + Sbjct: 121 VSEGEINSYLEKEKQQFKESPEVDKKLKELISASGMTYDEYWNDYEKYNVKRMLLFDKLY 180 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + ++E ++Y+ + Sbjct: 181 NTIINEGIKSGKLEKTDKMTVDTQNEYKKYVDSII 215 >gi|297585156|ref|YP_003700936.1| SurA domain-containing protein [Bacillus selenitireducens MLS10] gi|297143613|gb|ADI00371.1| SurA domain protein [Bacillus selenitireducens MLS10] Length = 272 Score = 39.3 bits (89), Expect = 0.82, Method: Composition-based stats. Identities = 19/148 (12%), Positives = 51/148 (34%), Gaps = 13/148 (8%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQK-----------INGELEKIAVQELIVETLKKQE 89 + +NGE I+ + Q ++ + ++ TL QE Sbjct: 81 DVVAEVNGEEISQEEFLATYEPQFQQMAMQSQMTGEEVDEAQIRDMVADSMVNNTLLIQE 140 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 + GI + + A+ + ++ F L++QG ++ + +Q ++ Sbjct: 141 ADSQGIEATDEDIEQLLTELAQQNQMESSDQFLQALEEQGTPEDVVMDQVEMQVKVDQLI 200 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVR 176 N+ + + E+ +++ + Sbjct: 201 ANE-AGEIDVSDAEVEEMYAQLEAQQEQ 227 >gi|121613493|ref|YP_001000390.1| peptidyl-prolyl cis-trans isomerase D,-like protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167005333|ref|ZP_02271091.1| hypothetical protein Cjejjejuni_03670 [Campylobacter jejuni subsp. jejuni 81-176] gi|87249349|gb|EAQ72309.1| peptidyl-prolyl cis-trans isomerase D, homolog [Campylobacter jejuni subsp. jejuni 81-176] Length = 496 Score = 39.3 bits (89), Expect = 0.82, Method: Composition-based stats. Identities = 23/258 (8%), Positives = 66/258 (25%), Gaps = 15/258 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------- 63 + + + + + +Y S T+ E I + R + Sbjct: 14 VTIWVSTIAFVGAGFLGWGAYDFNLNRSSSVATVGNEKIGFSEFDTRYRQILSYYNQISN 73 Query: 64 ----KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 ++ IA+ L+ + L + GI + N + + + Sbjct: 74 GALTPENAEQLGIKNIALSSLVEDKLLLNFAKDLGIGVNENEILQKLANTREFQDPTGDF 133 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + + +N + Q + + N+ + K + +++ L Sbjct: 134 NKTIYYELLNANNLTPKDYETQLANEVITDKL--NQIFNIPSKDEELKMLASSYFMQDAL 191 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + N N+ ++K + +E + + + + Sbjct: 192 SIAKIDYDKKNIKINEEDLKKLWDEHKEDYKTKKIYEISTYFLSVSNEKIDDKELEKFYN 251 Query: 240 SDLHPQFQNLLKKSQNNT 257 D + + Sbjct: 252 QDENKLKYKDFAGKVMDF 269 >gi|153951630|ref|YP_001398361.1| peptidyl-prolyl cis-trans isomerase D-like protein [Campylobacter jejuni subsp. doylei 269.97] gi|152939076|gb|ABS43817.1| peptidyl-prolyl cis-trans isomerase D-like protein [Campylobacter jejuni subsp. doylei 269.97] Length = 496 Score = 39.3 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 67/227 (29%), Gaps = 19/227 (8%) Query: 3 SKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL 62 K + ++ ++ + FV F + SS T+ E I + R Sbjct: 8 HKKYLVVTIWVSTI--AFVGAGFLGWGAYDFNLNRSSS--VATVGNEKIGFSEFDTRYRQ 63 Query: 63 L-------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 + ++ IA+ L+ + L + GI + N + Sbjct: 64 ILSYYNQISNGALTPENAEQLGIKNIALSSLVEDKLLLNFAKDLGIGVNENEILQKLANT 123 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + + + + +N + Q V D + + N+ + K Sbjct: 124 REFQDPTGDFNKTIYYELLNANNLTPKDYETQLANE--VTTDKLNQIFNIPSKDEELKML 181 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + +++ L + N N+ ++K + +E+ Sbjct: 182 ASSYFMQDVLSIAKIDYDKKNIKINEEDLKKLWNEHKENYKTKKIYE 228 >gi|301625964|ref|XP_002942172.1| PREDICTED: hypothetical protein LOC100494783 [Xenopus (Silurana) tropicalis] Length = 1193 Score = 39.3 bits (89), Expect = 0.84, Method: Composition-based stats. Identities = 22/247 (8%), Positives = 57/247 (23%), Gaps = 16/247 (6%) Query: 65 LQKINGELEKI--AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 L +++ + K K+ F+ + E S Sbjct: 10 KLNQLQALRDQWQLLKQTVTNHNKAVGGAKALQEFNKKADELEMWMREK-----EEKPSL 64 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 L D + + + L ++ + T Sbjct: 65 SLLLDQNNDKIQLTRRILDLKQEQLHYRNLQENINCLAQKLEKQGRMESKATSNRRKQLN 124 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 ++ L + +A + +E K + G ++ + E +L Sbjct: 125 KMWLRLQETLLEHQQTLQLALEAATLWQQADGILRAME--GQKSGVGNGGDSKAIREREL 182 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYI------AICDKRDLGGEIALKAYLSAQNTPTK 296 ++ + N G + + + D RD + + + Sbjct: 183 RDIASQIMLLLETNLGGWLEGGFGFQMVRESLRRRVSDLRDTLVLSE-FMEIVQKEENRR 241 Query: 297 IEKHEAE 303 ++ Sbjct: 242 KKQKLEA 248 >gi|237742313|ref|ZP_04572794.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. 4_1_13] gi|229429961|gb|EEO40173.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. 4_1_13] Length = 356 Score = 39.3 bits (89), Expect = 0.84, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 49/171 (28%), Gaps = 8/171 (4%) Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + + ++ + K+ L I + + K + Sbjct: 91 LAEKVRDEVKPTDEDLLKFFNENKSKYSIPATADAKLVFISVKSAKEDDNLAKEKAEKLL 150 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVTQK 265 S L K + ++ + + + +F+ LK +N T+ Sbjct: 151 SELTPENFTEKGKSLSNNQDIIY-QDLGTFGTTAMVKEFEEALKDVPSNTVVNKVIKTKF 209 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS-NAIIH 315 G + K++ ++ P EK E ++KL A I Sbjct: 210 GYHVAYV--KKNDNNRQWAVEHILIVPYP--SEKTMTEKLEKLNKVKADIE 256 >gi|304315629|ref|YP_003850774.1| hypothetical protein Tthe_0101 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777131|gb|ADL67690.1| conserved hypothetical protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 241 Score = 39.3 bits (89), Expect = 0.85, Method: Composition-based stats. Identities = 14/155 (9%), Positives = 42/155 (27%), Gaps = 9/155 (5%) Query: 41 RIRTTINGEVITDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 I +N I + R L L ++ + +L+ E +++ + Sbjct: 65 DIIAKVNNIPIYKSEFELRKGLTLASDAEISNIDNYILNKLVREKVEEHLASSYNLKVSQ 124 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL--------AIQSIWPDVVKND 151 + +N + + + E + ++Y ++ + Sbjct: 125 DEINLYIEKEKKEFADYPEANQMLQEMISASGMTSEEYWNTYEKYNVKRLLLFDKLYNTI 184 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + +E +N + Y+ + Sbjct: 185 IENGIRSGNLEKTSNTTFSTQSEYKNYVDNIIEQY 219 >gi|34540273|ref|NP_904752.1| hypothetical protein PG0452 [Porphyromonas gingivalis W83] gi|34396585|gb|AAQ65651.1| conserved hypothetical protein [Porphyromonas gingivalis W83] Length = 715 Score = 39.3 bits (89), Expect = 0.85, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 42/136 (30%), Gaps = 10/136 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 K+ I ++ I + S + INGE I D +R+ Sbjct: 4 LEKIRGKAGLLIVVVGVALFAFIIGDFLRSGSTFFRQSQEVVLDINGEKIKIYDYQQRLK 63 Query: 62 LLKLQ----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 ++ + + L Q+ + + + Q+ +K G+T + + Sbjct: 64 AMEKRAEQSGTKITDEQRASLNNQLAQQYVQDYVLGQQADKLGLTVSPEELLALIIGDGV 123 Query: 112 NTGLSAEDFSSFLDKQ 127 + A+ F S Sbjct: 124 QPSMFAQQFFSRFGIN 139 >gi|86151641|ref|ZP_01069855.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 260.94] gi|85841270|gb|EAQ58518.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 260.94] Length = 496 Score = 39.3 bits (89), Expect = 0.85, Method: Composition-based stats. Identities = 23/258 (8%), Positives = 66/258 (25%), Gaps = 15/258 (5%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------- 63 + + + + + +Y S T+ E I + R + Sbjct: 14 VTIWVSTIAFVGAGFLGWGAYDFNLNRSSSVATVGNEKIGFSEFDTRYRQILSYYNQISN 73 Query: 64 ----KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 ++ IA+ L+ + L + GI + N + + + Sbjct: 74 GALTPENAEQLGIKNIALSSLVEDKLLLNFAKDLGIGVNENEILQKLANTREFQDPTGDF 133 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + + +N + Q + + N+ + K + +++ L Sbjct: 134 NKTIYYELLNANNLTPKDYETQLANEVITDKL--NQIFNIPSKDEELKMLASSYFMQDAL 191 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239 + N N+ ++K + +E + + + + Sbjct: 192 SIAKIDYDKKNIKINEEDLKKLWNEHKEDYKTKKIYEISTYFLSVSNEKIDDKELEKFYN 251 Query: 240 SDLHPQFQNLLKKSQNNT 257 D + + Sbjct: 252 QDENKLKYKDFAGKVMDF 269 >gi|296386502|ref|ZP_06876001.1| hypothetical protein PaerPAb_00150 [Pseudomonas aeruginosa PAb1] Length = 375 Score = 39.3 bits (89), Expect = 0.87, Method: Composition-based stats. Identities = 14/171 (8%), Positives = 48/171 (28%), Gaps = 14/171 (8%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + K + + E + + V + + + + + ++ + E R Sbjct: 212 RELAGKVSDKDAEAYYRRNLERYRNVAQVQAAHIRLADQASADKVYAELRGGLAFDEAVR 271 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLE--SDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 A G + L + L + + + P Sbjct: 272 R---------YSLADDRDRDPPGDLGLIRPQDGRLDLLRKTALIQKADTVSQPMRIDGAF 322 Query: 268 EYIAI---CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 E + + D++ + +++ ++ ++ ++ L + A + Sbjct: 323 EIVRVRSREDRQLPLDDRSVRFEVNQAVAREQLAAQFETRLRNLLAGARVE 373 >gi|311087368|gb|ADP67448.1| peptidyl-prolyl cis-trans isomerase D [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087867|gb|ADP67946.1| peptidyl-prolyl cis-trans isomerase D [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 623 Score = 39.3 bits (89), Expect = 0.88, Method: Composition-based stats. Identities = 27/260 (10%), Positives = 69/260 (26%), Gaps = 9/260 (3%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 + + L +++ I I KS N + + Sbjct: 137 ERYLNYLTSINSTNHEYINIIKKKINTENLIHTISKSNFILKKEEKNIIKLLSQKRIIKK 196 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 A + N Q ++ + F K +E++ K +N + Sbjct: 197 AIVKIDPSIYKKNITNQEAQIYFKKNQDNFYIPEKF--KINFVELKTDNFKIHCENKEIY 254 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-----DVSI 231 ++ IR + K + K + A RL K A + Sbjct: 255 DWYIRNITQYSTKEKRRYSIIQVKNKQQAISILSRLHNTPEDFSKIAQEQSTDPISSKKD 314 Query: 232 GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 G ++ + + ++ +N ++ + + + + + + Sbjct: 315 GDIGWISIDLIPDEIKHANLNKKNQISDVIPFHNEFLIVKLNETQIGTQKKIY--EVFDS 372 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 +K + +L++ Sbjct: 373 IKKQIKQKKSLDLYNELKNK 392 >gi|15617076|ref|NP_240289.1| peptidyl-prolyl cis-trans isomerase D [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11386976|sp|P57550|PPID_BUCAI RecName: Full=Peptidyl-prolyl cis-trans isomerase D; Short=PPIase D; AltName: Full=Rotamase D gi|25403639|pir||G84985 peptidylprolyl isomerase (EC 5.2.1.8) [imported] - Buchnera sp. (strain APS) gi|10039141|dbj|BAB13175.1| peptidyl-prolyl cis-trans isomerase D [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 623 Score = 39.3 bits (89), Expect = 0.88, Method: Composition-based stats. Identities = 27/260 (10%), Positives = 69/260 (26%), Gaps = 9/260 (3%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 + + L +++ I I KS N + + Sbjct: 137 ERYLNYLTSINSTNHEYINIIKKKINTENLIHTISKSNFILKKEEKNIIKLLSQKRIIKK 196 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 A + N Q ++ + F K +E++ K +N + Sbjct: 197 AIVKIDPSIYKKNITNQEAQIYFKKNQDNFYIPEKF--KINFVELKTDNFKIHCENKEIY 254 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-----DVSI 231 ++ IR + K + K + A RL K A + Sbjct: 255 DWYIRNITQYSTKEKRRYSIIQVKNKQQAISILSRLHNTPEDFSKIAQEQSTDPISSKKD 314 Query: 232 GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 G ++ + + ++ +N ++ + + + + + + Sbjct: 315 GDIGWISIDLIPDEIKHANLNKKNQISDVIPFHNEFLIVKLNETQIGTQKKIY--EVFDS 372 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 +K + +L++ Sbjct: 373 IKKQIKQKKSLDLYNELKNK 392 >gi|237740229|ref|ZP_04570710.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. 2_1_31] gi|229422246|gb|EEO37293.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. 2_1_31] Length = 356 Score = 38.9 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 19/206 (9%), Positives = 54/206 (26%), Gaps = 5/206 (2%) Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + + + A+N + ++G+ N ++ + Sbjct: 29 LDLAKIMATFMINQKATKEQAEELAKNMIAKQIKVAKMAKEKGVKVNEELDLMSQLQDYA 88 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205 + + + E+ + K+ L I + V K + Sbjct: 89 IGLSEKVREEIKPTDAELESFFNTNKSRYNIPETADAKLIFITVKSTKEDDAVAKAEAEK 148 Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVT 263 + L K + + + + +F+ LK +N T Sbjct: 149 LLAELTPENFSEKGKTLGNNQDIIY-QDLGTFGTKAMVKEFEEALKDVPSNTVINKVIKT 207 Query: 264 QKGVEYIAICDKRDLGGEIALKAYLS 289 + G + + K++ + ++ Sbjct: 208 KFGYHVVYV--KKNDNNQQWSAEHIL 231 >gi|254458909|ref|ZP_05072332.1| conserved hypothetical protein [Campylobacterales bacterium GD 1] gi|207084180|gb|EDZ61469.1| conserved hypothetical protein [Campylobacterales bacterium GD 1] Length = 488 Score = 38.9 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 22/234 (9%), Positives = 69/234 (29%), Gaps = 21/234 (8%) Query: 5 VFTSLSDFIK--LLTTYFVLIIFCIVPIVSYKSWAMSSRI--RTTINGEVITDGDISKRI 60 + T + K ++T + I F V + ++ + + +T G++ K Sbjct: 1 MITWMQRHKKYLIITIWISTIAFVGAGFVGWGQYSYGDKAGAVAKVGNVEVTMGELQKTY 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + L Q L+ A+++L + L + + + Sbjct: 61 SNLYAQYNKMFQGNFDEEKAKSFGLQSQALKQLTDQALIINLALSYDLEINDAELLNELK 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 ++ + E + L + + ++ + Q + + + E++I Sbjct: 121 TQEYFFKDGVFNKEIYKQVLSQNNMSIKEYEVSVKKQLLIQKTL-KLLPVDVSKNELDII 179 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 ++ + + + L + + + ++ E + Sbjct: 180 SSVLNIADKINYKILSDEKINIDTSDAALKPFWEARQQNFMSEVTYEVKFIKQS 233 >gi|172044707|gb|ACB69917.1| perchlorate reductase A [Dechlorosoma sp. KJ] Length = 927 Score = 38.9 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 23/279 (8%), Positives = 61/279 (21%), Gaps = 22/279 (7%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIR-----TTINGEVITDGDISKRIALL 63 ++ +I FV + + +N E+I+ DI L Sbjct: 482 MNHYIGQWKPAFVAGLVALAFPEGVNKQRFCQTTIWTYIHAEVNDEIIS-SDIDTE-KYL 539 Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 + G++ + Q K + + + Y L + Sbjct: 540 RDSITTGQMPNMPEQ---GRDPKVFFVYRGNWLNQAKGQKYVLENLWPKLELIVDINIRM 596 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK-----QKMKNITVREY 178 D + + +V E I ++ + Sbjct: 597 DSTALYSDVVLPSAHWYEKLDLNVTSE--HSYINMTEPAIKPMWESKTDWQIFLALAKRV 654 Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238 + + +V+ + + ++ + + Sbjct: 655 EMAAKRKKYEKFNDEKFKWVRDLSNLWNQMTMDGKLAEDEAAAQYILDNAPQSKGITIQM 714 Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277 + +F++ T + DK+ Sbjct: 715 LREKPQRFKSNWTSPLKEGVP--YTPFQYFVV---DKKP 748 >gi|269954958|ref|YP_003324747.1| von Willebrand factor type A [Xylanimonas cellulosilytica DSM 15894] gi|269303639|gb|ACZ29189.1| von Willebrand factor type A [Xylanimonas cellulosilytica DSM 15894] Length = 2262 Score = 38.9 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 6/66 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSS------RIRTTINGEVITDG 54 M + S+ L + IV + S A + +I T++G +T Sbjct: 1 MAPRTKFSIRRTPVLRRIAAATVALAIVSGGAIASQAAAEGEGADGQIVATVDGVPVTQA 60 Query: 55 DISKRI 60 ++ + I Sbjct: 61 ELEELI 66 >gi|207091647|ref|ZP_03239434.1| peptidyl-prolyl cis-trans isomerase D [Helicobacter pylori HPKX_438_AG0C1] Length = 487 Score = 38.9 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 36/317 (11%), Positives = 90/317 (28%), Gaps = 21/317 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK + +EL + +K +EKS DS A + GL A Sbjct: 61 RRLKDAYAESIPD---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVEKLLILQKISALFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPNDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EK-HEAEYVKKLRSNAI 313 + YV ++NA Sbjct: 284 NEKALRSYVALKKANAK 300 >gi|330446025|ref|ZP_08309677.1| putative uncharacterized protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490216|dbj|GAA04174.1| putative uncharacterized protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 269 Score = 38.9 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 19/170 (11%), Positives = 58/170 (34%), Gaps = 14/170 (8%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M K L IK ++F++ + S + ++N +T ++++ Sbjct: 1 MLKKGNYWLKIVIKDPFSHFLIAGTVLFIFYSLYHSS------ASVNTISVTPSQVAQQK 54 Query: 61 ALLKL--------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 L Q++N ++ + +++++ + K +EK + + + ++ Sbjct: 55 KDDTLYFGSPPSKQELNKDINHVVLKQMLSQQALKLGLEKGDPNLNEMLMQRYLSYVSQL 114 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 L+A + S +K + + + ++ + Sbjct: 115 AKLNATNTSLLHQYYLTHQTRYKHPDMYSLCYHFLTPQEVQHPISTMDSQ 164 >gi|322491746|emb|CBZ27019.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 438 Score = 38.9 bits (88), Expect = 0.92, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 1/44 (2%) Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICD 274 G + + + + + + + P TQ GV + CD Sbjct: 395 GDLGVVEKGTFADEIDEAAFRLRRGEVSAPVETQLGVHLLYRCD 438 >gi|332185866|ref|ZP_08387613.1| hypothetical protein SUS17_824 [Sphingomonas sp. S17] gi|332014224|gb|EGI56282.1| hypothetical protein SUS17_824 [Sphingomonas sp. S17] Length = 650 Score = 38.9 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 13/171 (7%), Positives = 47/171 (27%), Gaps = 14/171 (8%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCI--VPIVSYKSWAMSSRIRTTINGEVITDGDI----SK 58 + + + + + I F V ++ + ++ + +T D+ Sbjct: 9 INSKAGVIVTFIVLGVIAIAFAAGDVSNIAGMAGGLTGSTVAKVGSAKVTVDDLRTAAQN 68 Query: 59 RIALLKLQKINGELEKI--------AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 +A + ++ ++ + +Q + +Q + G+ V+ Sbjct: 69 EVAAYRQEQPTLDMAQFIAAGGFEGVLQREVTGLSLEQFGKDQGMVVSRRLVDGQIASIP 128 Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 G + + + + + + + G +M Sbjct: 129 AFRGPNGQFDPALYQQLLAQRKMTDAQVRTDLQRTLFAQQLTVPTIGATQM 179 >gi|254281981|ref|ZP_04956949.1| conserved hypothetical protein [gamma proteobacterium NOR51-B] gi|219678184|gb|EED34533.1| conserved hypothetical protein [gamma proteobacterium NOR51-B] Length = 307 Score = 38.9 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 30/310 (9%), Positives = 79/310 (25%), Gaps = 48/310 (15%) Query: 19 YFVLIIFCIVPIVSYKSWAMSS---RIRTTINGEVITDGDISKRIALLKLQKINGEL--- 72 + ++ F V ++ S RI E + R +L Sbjct: 15 FLIMGAFLFVFYLAITDDEASEDGHRIVV---DEPTLLRFLQYRSKSFDPNMAAQKLSAL 71 Query: 73 ----EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + + +L+ E +E + G+ D + VQ + Sbjct: 72 NMSKREQLLMQLVREEALYREAGRLGLHRDDYVIKQRMVQKVEYLARGFGE--------- 122 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 A Q I + V ++ E A + + + + + Sbjct: 123 ----------AEQLIDRNAVATYYVENISRYEEPSIATFAHVFVRGLDDNARQRIKGLQQ 172 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 ++ F R + + + D G+ ++ P + Sbjct: 173 ALSREDIAFSSA------MGRGDRFVYHANYVERSRDMIDSHFGERFGAKLFEMSPDQKR 226 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVK 306 P + G + + + ++ ++ +++ + + Sbjct: 227 WQ--------GPVASDHGYHLVMLFKRDPASVPSLDSIYPRVAEDARRVALDQQTEQALT 278 Query: 307 KLRSNAIIHY 316 + SN + + Sbjct: 279 DIVSNYEVTF 288 >gi|52078715|ref|YP_077506.1| putative lytic transglycosylase YomI [Bacillus licheniformis ATCC 14580] gi|52784085|ref|YP_089914.1| hypothetical protein BLi00261 [Bacillus licheniformis ATCC 14580] gi|52001926|gb|AAU21868.1| putative lytic transglycosylase YomI [Bacillus licheniformis ATCC 14580] gi|52346587|gb|AAU39221.1| hypothetical protein BLi00261 [Bacillus licheniformis ATCC 14580] Length = 255 Score = 38.9 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 61/188 (32%), Gaps = 13/188 (6%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKIN-----------GELEKIAVQELIVETLKKQE 89 + +N E IT D + ++ ++Q +++K A+ LI + L QE Sbjct: 65 KTVAVVNDEKITGKDYNSVLSTAQMQYQQTGQDPTSKDAAQQIKKQAIDSLIGQALITQE 124 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 +K G + + + + + K G+ N K +A + Sbjct: 125 ADKKGYKASEKEIEKQLDESKKQYKNEQDFEE-AVKKAGLNMNTLKSDIADSIKTEKYID 183 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + EI + T F ++Q+ QKR + + Sbjct: 184 KELPTD-QVTDKEIKDYYDQFAAQQKDSGQKNTPAFDDVKQQIQDMLKQQKRQEKLGQQV 242 Query: 210 LRLPKDCN 217 +L K + Sbjct: 243 EKLKKSAD 250 >gi|312864592|ref|ZP_07724823.1| putative foldase protein PrsA [Streptococcus downei F0415] gi|311099719|gb|EFQ57932.1| putative foldase protein PrsA [Streptococcus downei F0415] Length = 357 Score = 38.9 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 78/310 (25%), Gaps = 27/310 (8%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69 F LL + I + + S + ++ G+ IT D+ R + Sbjct: 44 KIFRSLLVFVLAMAIGGVGTYLYMNSRPSEKTVLASMKGKEITVADLYNR-------QKG 96 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + K A+ E I+ + + + K + N Q A + + + Q Sbjct: 97 NQATKEALLETILSDILEDKYGKKVSQDEVNKQYQESAQKAGSN--FSSMLDQYGYTQDS 154 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 N + L K D K + + + + L Sbjct: 155 YKNLIRLQLLQNYALKTAAKKDLTEKKLKSLYKDYNPDITISFVKTDDESKANSLHDQAT 214 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + K E + + + L D+ L Sbjct: 215 ADGADFSQIVKDNNGQENVSFDSGDKYDSNKSSS-------------LPPEDVQKAAFKL 261 Query: 250 LKKSQNNTTNPYVTQK--GVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE--AEY 304 K ++T T + + K + + K L+ K + Sbjct: 262 DKDGVSDTIKVQETDNSTSYYVVKVTAKNEKNPDWKNYKKRLTDIYVNQKNSNSSFKTQV 321 Query: 305 VKKLRSNAII 314 + L + Sbjct: 322 ISDLLKEYNV 331 >gi|197124443|ref|YP_002136394.1| DSBA oxidoreductase [Anaeromyxobacter sp. K] gi|196174292|gb|ACG75265.1| DSBA oxidoreductase [Anaeromyxobacter sp. K] Length = 348 Score = 38.9 bits (88), Expect = 0.95, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 6/70 (8%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEKSGIT 96 + G+ IT G++ + + Q +L++ ++ +I + + + + GIT Sbjct: 35 VAKVGGQAITTGELDELVKSDLKQLEQQYEEQKYQLKRQGLESMIRRRVFEAKAKAEGIT 94 Query: 97 FDSNTVNYFF 106 D Sbjct: 95 PDELVNRDVV 104 >gi|312887559|ref|ZP_07747153.1| hypothetical protein MucpaDRAFT_3495 [Mucilaginibacter paludis DSM 18603] gi|311299929|gb|EFQ77004.1| hypothetical protein MucpaDRAFT_3495 [Mucilaginibacter paludis DSM 18603] Length = 542 Score = 38.9 bits (88), Expect = 0.97, Method: Composition-based stats. Identities = 19/246 (7%), Positives = 56/246 (22%), Gaps = 14/246 (5%) Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 K + + + ++ + + Sbjct: 289 KRIKYSVSDFKEFVNNEPMFMGSLSAPEDVKKMLRTFITEQYLFAEALQMNIQANEEYRQ 348 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 F Q + +N K E+ K N ++ D + Sbjct: 349 FTQGYREKIFVEYYKRNHIYPKISIQPKEVEDYYSKHNNNFRVFESATVSVYKFRDIREA 408 Query: 194 NQG--FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251 + + +D + + + I D S + + +L Sbjct: 409 YHQRMVLSAKARDMVAPKKNIGVNSLLATDIEVNIKDQS----------NDPKLIKAILS 458 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309 + P + I++ ++ K ++ K ++ A ++ + Sbjct: 459 LPPGQISAPIELKGEYWLISVSSRKGLITLPLSYAKEEITRVLQSQKEKQITAHLLEGMT 518 Query: 310 SNAIIH 315 + + Sbjct: 519 TKYPVE 524 >gi|291535316|emb|CBL08428.1| PPIC-type PPIASE domain [Roseburia intestinalis M50/1] gi|291538114|emb|CBL11225.1| PPIC-type PPIASE domain [Roseburia intestinalis XB6B4] Length = 329 Score = 38.9 bits (88), Expect = 0.97, Method: Composition-based stats. Identities = 16/164 (9%), Positives = 46/164 (28%), Gaps = 3/164 (1%) Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + E +I Q + + + + + Sbjct: 130 LSKEENTYLEVTESDISEYYQHYALAQKLYNSLTNSVNEEVSDDEARVIEIMQIFVADST 189 Query: 208 SRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264 + + + FAS ++ + + +L + + + T++ Sbjct: 190 KASDVAAKLERGDDFASVANNYNELSSIQTTVARDELPKEVEEVAFNLDNGQTSSMIQAG 249 Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 KG +I +K + A K+ + + + ++V L Sbjct: 250 KGFYFIKCLNKYNEELTEANKSNIVEKREKEAFDDVYNQFVAGL 293 >gi|146086535|ref|XP_001465572.1| hypothetical protein [Leishmania infantum JPCM5] gi|134069671|emb|CAM67995.1| putative peptidyl-prolyl cis-trans isomerase [Leishmania infantum JPCM5] gi|322499014|emb|CBZ34086.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 160 Score = 38.9 bits (88), Expect = 0.97, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 1/44 (2%) Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICD 274 G + + + + + + + P TQ GV + CD Sbjct: 117 GDLGVVEKGTFADEIDKAAFRLRRGEVSAPVETQLGVHLLYRCD 160 >gi|186683673|ref|YP_001866869.1| hypothetical protein Npun_F3522 [Nostoc punctiforme PCC 73102] gi|186466125|gb|ACC81926.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102] Length = 260 Score = 38.9 bits (88), Expect = 0.97, Method: Composition-based stats. Identities = 26/239 (10%), Positives = 64/239 (26%), Gaps = 19/239 (7%) Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 ++ + + +QE +K+GI + L + + + H Sbjct: 25 ILESIATRKIIEQEAKKAGIQIGLEELQRAADSLRLANQLLKAEDTWA----WLEKYHLS 80 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 +++ + E ++ I Y + ++ Sbjct: 81 LDDFEAIAENNLLSAKLANHLFADKAEQFFYAHQLDYIAAVTYEVVL----------DDE 130 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQ 254 + +E + + + + + + G L +D + + Sbjct: 131 DLALELFYALQEGEISFQQIARQYIQ--NTEIRRAGGYQGIRLRTDFRPEIAAAIFAANP 188 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT--KIEKHEAEYVKKLRSN 311 P T KGV IA+ + + + + K + E V KL + Sbjct: 189 PQILKPITTPKGVHIIAVEEIIKPQLDEQRRLKIIGDLFTNWLKSQTAAMEIVTKLTKD 247 >gi|298374311|ref|ZP_06984269.1| sensor histidine kinase/response regulator [Bacteroides sp. 3_1_19] gi|298268679|gb|EFI10334.1| sensor histidine kinase/response regulator [Bacteroides sp. 3_1_19] Length = 905 Score = 38.9 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 17/240 (7%), Positives = 58/240 (24%), Gaps = 17/240 (7%) Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIR-------------TTINGEVITDGDISK 58 F+ + + ++ + IV S + IN I + Sbjct: 16 FLYMKHPFLLVWLTLIVLCGCTSSGKQKRHVIGLSQCMLDDAWREAMINDMRIEASNYDD 75 Query: 59 RIALLKLQKINGELEKIAVQELIVET----LKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 ++K + N E + +++LI + + + + Sbjct: 76 MEIIIKDAQNNNETQIQQIRDLIRQKVDVLIISPYQSEPITAVAEEAYRAGIPTIITDRK 135 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 ++ + ++SF+ A + P+ + + + Sbjct: 136 VNTDQYTSFVGANNYEIGLAAGNYAANYLPPNAIILEIWGLTQTSPAQERHKGFVDALRE 195 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 + R + + + + + + + ++ + Sbjct: 196 REDLSFRKIEGQWLVDTARMELRKLEHPEQIDFVYAHNDMMAIAAREYFMAWDSIRGRDL 255 >gi|226311741|ref|YP_002771635.1| hypothetical protein BBR47_21540 [Brevibacillus brevis NBRC 100599] gi|226094689|dbj|BAH43131.1| hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 246 Score = 38.9 bits (88), Expect = 0.99, Method: Composition-based stats. Identities = 26/213 (12%), Positives = 63/213 (29%), Gaps = 15/213 (7%) Query: 12 FIKLLTTYFVLIIFCIVPI------VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 F+K + ++ + S + I IT + ++ Sbjct: 30 FMKKFNVSILAASALVLGLAVAGCTPGKDSAFSADNPVAKIGNVTITQEQMYDKLK---- 85 Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 + K + ++I L KQE GIT ++ G S E F +L Sbjct: 86 ----KDAGKRVMADIITLELYKQEGAARGITVTDQELDARVNPVKEKLG-SPERFQQYLK 140 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 + + + ++ + + + + D + ++ NK K + Sbjct: 141 DKQMTEQELREGVRAVMLRDKLFEKDNPITEEQIKEYYEKNKDKFEGTFEEARPKVIEKV 200 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218 + + ++++ K + + K Sbjct: 201 KSRNKRNNMDKWIEELYKKHNVQIMDKDLESEK 233 >gi|322376480|ref|ZP_08050973.1| foldase protein PrsA [Streptococcus sp. M334] gi|321282287|gb|EFX59294.1| foldase protein PrsA [Streptococcus sp. M334] Length = 312 Score = 38.9 bits (88), Expect = 1.00, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 80/313 (25%), Gaps = 41/313 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L + ++ K + I G+VIT+ +++ N + Sbjct: 3 KKLLAGAITLLSVATLAACSKGSEGADLISMK--GDVITEHQFYEQVKS------NPSAQ 54 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++ + I + +KQ + ++T+ Q+ N L+ Sbjct: 55 QVLLNLTIQKVFEKQYGSEVDDKEVNDTIAEEEKQYGENYQRVLSQAGMTLET------- 107 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 Q +V+ E E+ + K + ++ ++K + Sbjct: 108 ----RKAQIRTSKLVELAVK---KAAEAELTDDAYKKAFDEYTPDVTAQIIRLDNEDKAK 160 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLK 251 K + K + + G+ + S P+ + Sbjct: 161 EILEKAKASGADFAQLAKDNSTDEKTKA--------NGGEITFDSASTEVPEQVKKAAFA 212 Query: 252 KSQNNTTNPYVT------QKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKH--EA 302 N ++ + + K + I K L K Sbjct: 213 LDVNGVSDVIKATGTQAYSSQYYIVKLIKKTEKSSNIDDYKEKLKTVILTQKQNDATFVQ 272 Query: 303 EYVKKLRSNAIIH 315 + K A I Sbjct: 273 SIIGKELQAANIK 285 >gi|150005095|ref|YP_001299839.1| peptidyl-prolyl cis-trans isomerase [Bacteroides vulgatus ATCC 8482] gi|294778904|ref|ZP_06744320.1| conserved hypothetical protein [Bacteroides vulgatus PC510] gi|149933519|gb|ABR40217.1| peptidyl-prolyl cis-trans isomerase [Bacteroides vulgatus ATCC 8482] gi|294447213|gb|EFG15797.1| conserved hypothetical protein [Bacteroides vulgatus PC510] Length = 710 Score = 38.9 bits (88), Expect = 1.00, Method: Composition-based stats. Identities = 16/156 (10%), Positives = 39/156 (25%), Gaps = 4/156 (2%) Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 E L + + +++ + + + N Sbjct: 550 ENDHLMVVALEKINPAGYRNINLVADMLKAEIIKDKKAEKLIAEMKGANSIDQVKNMANA 609 Query: 222 FASKIHDVSIGKAQYL--LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + + ++ Y+ + K N T P GV I + +K Sbjct: 610 VSDSVKHITFSAPAYVSVTRASEPALGAYASKAEVNKLTGPIKGNAGVYMIQVYNKEKSA 669 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 E K + ++ + ++ L A + Sbjct: 670 EEFDAKNE-ENNLSN-MAGRYASSFINDLYKKAEVK 703 >gi|313203966|ref|YP_004042623.1| ppic-type peptidyL-prolyl cis-trans isomerase [Paludibacter propionicigenes WB4] gi|312443282|gb|ADQ79638.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paludibacter propionicigenes WB4] Length = 704 Score = 38.9 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 37/121 (30%), Gaps = 10/121 (8%) Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHP--QFQNLLKK 252 + + +K+++ K + G+ ++ E+ P + + Sbjct: 366 AKDATKADSLVSAIKGGADFGALAKKYSAVKQTAANGGEIGWMQEATQGPEKEITSQAFS 425 Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 N ++GV+ + DK + + KI Y K+ ++A Sbjct: 426 KSKNDIFTIKDEQGVQIFQVMDK------TPARRKVKLAILERKIVPSSKSY-SKIYNDA 478 Query: 313 I 313 Sbjct: 479 K 479 >gi|166368195|ref|YP_001660468.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Microcystis aeruginosa NIES-843] gi|166090568|dbj|BAG05276.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Microcystis aeruginosa NIES-843] Length = 253 Score = 38.9 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 21/222 (9%), Positives = 47/222 (21%), Gaps = 1/222 (0%) Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 I ++ + K G+ A T E +++ Sbjct: 6 EIGDHKISDSAVLPLLAKYGMLPQLFREVIIEQAIADITCNPEERNAAYSRFYQNNQIAN 65 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + + + ++ N +L L Sbjct: 66 DEQMKSWLRQNGMDSEQLEYLILRDIKLEKFKQETWDNKVESYFLQVKNQLDKVVYSLIR 125 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKS 253 + + + R +K++ + G + S HPQ Q L Sbjct: 126 TKNIGIAQELFFRIQDRENSFAELAKKYSQGAEAETGGLIGPVELSTPHPQIGQILKASK 185 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 P + V + + + + L Sbjct: 186 PGQLWPPTQVGEWVVIVRLEKYLSCELDPPTRQRLRNDLFQQ 227 >gi|85717064|ref|ZP_01048025.1| hypothetical protein NB311A_10143 [Nitrobacter sp. Nb-311A] gi|85696102|gb|EAQ33999.1| hypothetical protein NB311A_10143 [Nitrobacter sp. Nb-311A] Length = 298 Score = 38.9 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 7/80 (8%) Query: 17 TTYFVLIIFCIVPIVSYKS----WAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70 T + + +V S A +S+I + +VIT + + + LL + Sbjct: 14 TAAVLGLCGLLVAGCSKNGGEQTSAPNSQIVAHVGDQVITTQEFANELRLLNIPPDKQKD 73 Query: 71 -ELEKIAVQELIVETLKKQE 89 E K + E++ Q+ Sbjct: 74 HETVKKVLSEMVTRKYLLQQ 93 >gi|69244418|ref|ZP_00602834.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium DO] gi|258614785|ref|ZP_05712555.1| rotamase family protein [Enterococcus faecium DO] gi|293560739|ref|ZP_06677218.1| foldase protein PrsA [Enterococcus faecium E1162] gi|293566174|ref|ZP_06678577.1| foldase protein PrsA [Enterococcus faecium E1071] gi|314938540|ref|ZP_07845824.1| putative foldase protein PrsA [Enterococcus faecium TX0133a04] gi|314940885|ref|ZP_07847791.1| putative foldase protein PrsA [Enterococcus faecium TX0133C] gi|314948094|ref|ZP_07851496.1| putative foldase protein PrsA [Enterococcus faecium TX0082] gi|314952022|ref|ZP_07855045.1| putative foldase protein PrsA [Enterococcus faecium TX0133A] gi|314991903|ref|ZP_07857358.1| putative foldase protein PrsA [Enterococcus faecium TX0133B] gi|314995161|ref|ZP_07860275.1| putative foldase protein PrsA [Enterococcus faecium TX0133a01] gi|68196359|gb|EAN10787.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium DO] gi|291590100|gb|EFF21892.1| foldase protein PrsA [Enterococcus faecium E1071] gi|291605330|gb|EFF34785.1| foldase protein PrsA [Enterococcus faecium E1162] gi|313590570|gb|EFR69415.1| putative foldase protein PrsA [Enterococcus faecium TX0133a01] gi|313593487|gb|EFR72332.1| putative foldase protein PrsA [Enterococcus faecium TX0133B] gi|313595812|gb|EFR74657.1| putative foldase protein PrsA [Enterococcus faecium TX0133A] gi|313600243|gb|EFR79086.1| putative foldase protein PrsA [Enterococcus faecium TX0133C] gi|313642097|gb|EFS06677.1| putative foldase protein PrsA [Enterococcus faecium TX0133a04] gi|313645510|gb|EFS10090.1| putative foldase protein PrsA [Enterococcus faecium TX0082] Length = 336 Score = 38.9 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 29/312 (9%), Positives = 82/312 (26%), Gaps = 44/312 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 + + + + +++ T+ G IT D L + Sbjct: 4 KSIILAATSALAVLTLAACSGDTNKDIATMKGGTITVSDFYDEAKL-------ESSNQSL 56 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 VQ +I+ + K G V+ + + A++ G + E Q + K Sbjct: 57 VQRMIIYKV---FNNKYGDKVTDKQVDAEYDKQAKSLGDTFES-------QLEAAGYTKD 106 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + ++ + + ++ +++ ++ Sbjct: 107 TYKEYIRNNLAFEAGLKAHVDITDDDLKTAW-----KSFHPEVEAQIIKLSSEDEAKDVK 161 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF--QNLLKKS 253 + ++ GK ++ + P + K Sbjct: 162 KSA----------DDGDDFSKLAKDKSTDTETKEDGGKVKFDSTTTTIPAEVKEAAFKLK 211 Query: 254 QNNTTNPYVTQK------GVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKI--EKHEAEY 304 ++ T + + ++ G ++ K L T TK+ + Sbjct: 212 DGEISDVITTTNPTSYATEYYVVKMVKNQNKGNDMDKYKDQLKDIATETKLSDNAFTTKV 271 Query: 305 VKKLRSNAIIHY 316 + + +A + Sbjct: 272 IGEELKDANVKI 283 >gi|313159819|gb|EFR59175.1| PPIC-type PPIASE domain protein [Alistipes sp. HGB5] Length = 677 Score = 38.9 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 15/113 (13%), Positives = 37/113 (32%), Gaps = 10/113 (8%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 + + T + ++ ++ I+ + + ++ + I+GE I + + Sbjct: 4 LNTLRTKFGIVLSIVIAG--ALLAFILSLKTEMGFSGNDPRVGVIDGEKINYSEYYNQYE 61 Query: 62 LLKLQKINGELEKI--------AVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 +K Q E + A Q LI + + +K G+ Sbjct: 62 QVKAQSGAQESNEQQSAMLANAAWQALIGKYVLTPGFDKMGLRVTEPERMSMV 114 >gi|167038249|ref|YP_001665827.1| hypothetical protein Teth39_1856 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116657|ref|YP_004186816.1| hypothetical protein Thebr_1904 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166857083|gb|ABY95491.1| hypothetical protein Teth39_1856 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929748|gb|ADV80433.1| hypothetical protein Thebr_1904 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 241 Score = 38.9 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 17/171 (9%), Positives = 48/171 (28%), Gaps = 9/171 (5%) Query: 38 MSSRIRTTINGEVITDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96 + NG I + R L L + ++ + +L+ E +K+ K + Sbjct: 62 NEGDVIAEANGIPIYKNEFELRKGLTLASEGQVNDINNFVLNKLVREKVKEYLAMKYNLK 121 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL--------AIQSIWPDVV 148 + +N + + + E + +++Y ++ + Sbjct: 122 VSEDEINSYIEKEKQQFKEFPEAEGKLKELISASGMRYEEYWNDYERYNVKRMLLFDKLY 181 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 N E++ ++Y + + K+ + Sbjct: 182 NAIINEGIKNGELKKTDKMTIEVQNEYKKYFDNIIDQYVKQAKISIDEKYK 232 >gi|332983150|ref|YP_004464591.1| hypothetical protein Mahau_2629 [Mahella australiensis 50-1 BON] gi|332700828|gb|AEE97769.1| hypothetical protein Mahau_2629 [Mahella australiensis 50-1 BON] Length = 240 Score = 38.9 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 35/136 (25%), Gaps = 27/136 (19%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIV-------------SYKSWAMSSRIRTTINGEVI 51 + I + +LI F + + + TI I Sbjct: 1 MLKKTGTIIAIAAVALLLIAFFAINTGFAESMWSYIGEQAASIREQKNDATIATIGDARI 60 Query: 52 TDGDIS--------------KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 T D+ K I L+ ++ + LI + QE K G + Sbjct: 61 TQNDLDLAMLMREQAYELQSKEIDELQNMMPEQPTKEKVLDSLIENEILYQEAVKRGCSV 120 Query: 98 DSNTVNYFFVQHARNT 113 + + + + Sbjct: 121 SLDEAKKYLEDNKKIY 136 >gi|319648995|ref|ZP_08003204.1| hypothetical protein HMPREF1012_04243 [Bacillus sp. BT1B_CT2] gi|317388989|gb|EFV69807.1| hypothetical protein HMPREF1012_04243 [Bacillus sp. BT1B_CT2] Length = 255 Score = 38.9 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 61/188 (32%), Gaps = 13/188 (6%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKIN-----------GELEKIAVQELIVETLKKQE 89 + +N E IT D + ++ ++Q +++K A+ LI + L QE Sbjct: 65 KTVAVVNDEKITGKDYNSVLSTAQMQYQQTGQDPTSKDAAQQIKKQAIDSLIGQALITQE 124 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 +K G + + + + + K G+ N K +A + Sbjct: 125 ADKKGYKASEKEIEKQLDESKKQYKNEQDFEE-AVKKAGLNMNTLKSDIADSIKTEKYID 183 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + + EI + T F ++Q+ QKR + + Sbjct: 184 KELPTD-QVTDKEIKDYYDQFAAQQKDSGQKNTPAFDDVKQQIQDMLKQQKRQEKLGQQV 242 Query: 210 LRLPKDCN 217 +L K + Sbjct: 243 EKLKKSAD 250 >gi|75910578|ref|YP_324874.1| hypothetical protein Ava_4381 [Anabaena variabilis ATCC 29413] gi|75704303|gb|ABA23979.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length = 260 Score = 38.9 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 15/237 (6%), Positives = 57/237 (24%), Gaps = 2/237 (0%) Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 K++++++I ++ + + + E S + Sbjct: 2 ENFLKLSIEDIITHLKVSFQMPSILEAIATQRIIAETAEQLGIQLSVEELQQSADSMRFA 61 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + +DF + + + + + + + ++ Sbjct: 62 NRLLKADDTWNWLQKHYLTIDDFEEVAKSNLLHMKLAEHLFADKVEPFFYAHKIDYTGAA 121 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDL-HPQFQ 247 ++ + ++ + G S+ Sbjct: 122 TYEVILDDEDLALELFYALQEGEISFQEIARQYIQNPEIRRAGGYQGIRYRSEFRPEIAA 181 Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 + + P +T KGV IA+ + + + + + +++ Sbjct: 182 AVFAATPPQVLKPIITPKGVHIIAVEEIITPELDESRRIQILKDFFTHWLQQQITNL 238 >gi|220919173|ref|YP_002494477.1| DSBA oxidoreductase [Anaeromyxobacter dehalogenans 2CP-1] gi|219957027|gb|ACL67411.1| DSBA oxidoreductase [Anaeromyxobacter dehalogenans 2CP-1] Length = 349 Score = 38.9 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 6/70 (8%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEKSGIT 96 + G+ IT G++ + + Q +L++ ++ +I + + + + GIT Sbjct: 35 VAKVGGQAITTGELDELVKSDLKQLEQQYEEQKYQLKRQGLESMIRRRVFEAKAKAEGIT 94 Query: 97 FDSNTVNYFF 106 D Sbjct: 95 PDELVNRDVV 104 >gi|254883229|ref|ZP_05255939.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 4_3_47FAA] gi|319642604|ref|ZP_07997250.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_40A] gi|254836022|gb|EET16331.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 4_3_47FAA] gi|317385692|gb|EFV66625.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_40A] Length = 710 Score = 38.9 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 16/156 (10%), Positives = 40/156 (25%), Gaps = 4/156 (2%) Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221 E L + + +++ + + + N Sbjct: 550 ENDHLMVVALEKINPAGYRNINLVADMLKAEIIKDKKAEKLIAEMKGANSIDQVKNMANA 609 Query: 222 FASKIHDVSIGKAQYL--LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + + ++ Y+ + +K N T P GV I + +K Sbjct: 610 VSDSVKHITFSAPAYVSVTRASEPALGAYAIKAEVNKLTGPIKGNAGVYMIQVYNKEKSA 669 Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 E K + ++ + ++ L A + Sbjct: 670 EEFDAKNE-ENNLSN-MAGRYASSFINDLYKKAEVK 703 >gi|146279132|ref|YP_001169291.1| hypothetical protein Rsph17025_3102 [Rhodobacter sphaeroides ATCC 17025] gi|145557373|gb|ABP71986.1| hypothetical protein Rsph17025_3102 [Rhodobacter sphaeroides ATCC 17025] Length = 655 Score = 38.9 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 16/151 (10%), Positives = 44/151 (29%), Gaps = 17/151 (11%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----ISKRIALLKLQKING 70 ++ V ++ + ++ ++ IT D + + + L Q Sbjct: 53 IVFWGLVALMAVGLGGFGVTNFGGGLSTVGSVGDRDITTADYARALQQEMRALGAQINQP 112 Query: 71 ---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG----LSA 117 L++ + L+ + E ++ G++ V G Sbjct: 113 VTMEMARAFGLDQQVRRRLVTQAALSNEADRVGLSVGDARVAEEITGSDSFHGPSGQFDR 172 Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 E + L + + ++ F+ L + Sbjct: 173 ETYRLVLRQNNLSESEFENGLREDISRSLLQ 203 >gi|86357790|ref|YP_469682.1| peptidyl prolyl cis-trans isomerase D signal peptide protein [Rhizobium etli CFN 42] gi|86281892|gb|ABC90955.1| peptidyl prolyl cis-trans isomerase D signal peptide protein [Rhizobium etli CFN 42] Length = 646 Score = 38.9 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 32/396 (8%), Positives = 87/396 (21%), Gaps = 86/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEV--ITDGDISK 58 M + + ++ L ++ F I I SS T+ + +T+ ++ Sbjct: 17 MFHLLRRAAQTWVAKLLLLLLVASFGIWGISRELISGGSSTTVVTVGDQKVGVTEFQLAY 76 Query: 59 R-----------IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + + L Q +E+ + +L+ Q E + + + Sbjct: 77 QRQVTSIGQQFGMRLTPEQARAFGVEQQVLSQLVAGASLDQLAEDMNLGLSEDRLAQLIG 136 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM-------------- 153 ++ + + + + V Sbjct: 137 DDPAFKAVNGQFDRELFVSRLRNAGIRQDDYIKERSKVAVRSQIVDAVSNGFTAPKTLID 196 Query: 154 ----------------------LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 ++ A+ + R R +++ Sbjct: 197 ALKLYGDESRSIDYLLLTNANIEPIKAPADDVLASWFEGVKQRYRAPEYRKLIYLKLQPA 256 Query: 192 LQNQGFVQKRIKDAEESR-----------LRLPKDCNKLEKFASKI-HDVSIG------- 232 + E + + + A+ + G Sbjct: 257 DIADAATVTDDQIREAFEKGKDSYRTPESRTIEQLTFASKDLATAAETALKGGTSFDQLL 316 Query: 233 -KAQYLLESDLHPQFQNLLKKSQ------------NNTTNPYVTQKGVEYIAICDKRD-- 277 L +F Q TT G + I + + Sbjct: 317 TDQGKTASDVLLGEFTKDKVPDQAVADAAFAVSKDGGTTPVVDGSFGPVILRITNIKPET 376 Query: 278 LGGEIALKAYLSAQN-TPTKIEKHEA--EYVKKLRS 310 + +K + Q ++ + ++ +R+ Sbjct: 377 VKNFDEVKEDIRKQLALSNASQEVINVHDRIEDMRA 412 >gi|148926659|ref|ZP_01810340.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845178|gb|EDK22273.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 496 Score = 38.9 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 26/227 (11%), Positives = 64/227 (28%), Gaps = 19/227 (8%) Query: 3 SKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL 62 K + ++ ++ + FV F + SS T+ E I + R Sbjct: 8 HKKYLVVTIWVSTI--AFVGAGFLGWGAYDFNLNRSSS--VATVGNEKIGFSEFDTRYRQ 63 Query: 63 L-------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 + ++ IA+ L+ + L + GI + N + Sbjct: 64 ILSYYNQISNGALTPENAEQLGIKNIALSSLVEDKLLLNFAKDLGIGVNENEILQKLANT 123 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 + + + + +N + Q + + N+ + K Sbjct: 124 REFQDPTGDFNKTIYYELLNANNLTPKDYETQLANEAITDKL--NQIFNIPSKDEELKML 181 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + +++ L + N N+ ++K + +E Sbjct: 182 ASSYFMQDALSIAKIDYDKKNIKINEEDLKKLWNEHKEDYKTKKIYE 228 >gi|219682383|ref|YP_002468767.1| peptidyl-prolyl cis-trans isomerase D [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219622116|gb|ACL30272.1| peptidyl-prolyl cis-trans isomerase D [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086780|gb|ADP66861.1| peptidyl-prolyl cis-trans isomerase D [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 623 Score = 38.9 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 27/260 (10%), Positives = 69/260 (26%), Gaps = 9/260 (3%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 + + L +++ I I KS N + + Sbjct: 137 ERYLNYLTSINSTNHEYINIIKKKINTENLIHTISKSNFILKKEEKNIIKLLSQKRIIKK 196 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 A + N Q ++ + F K +E++ K +N + Sbjct: 197 AIVKIDPSIYKKNITNQEAQIYFKKNQDNFYIPEKF--KINFVELKTDNFKIHCENKEIY 254 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-----DVSI 231 ++ IR + K + K + A RL K A + Sbjct: 255 DWYIRNITQYSTKEKRRYSIIQVKNKQQAISILSRLHNTPEDFSKIAQEQSTDPISSKKD 314 Query: 232 GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 G ++ + + ++ +N ++ + + + + + + Sbjct: 315 GDIGWISIDLIPDEIKHANLNKKNQISDVIPFHNEFLIVKLDETQIGTQKKIY--EVFDS 372 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 +K + +L++ Sbjct: 373 IKKQIKQKKSLDLYNELKNK 392 >gi|211970998|dbj|BAG82828.1| membrane fusion protein [Pasteurella pneumotropica] Length = 474 Score = 38.9 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 15/156 (9%), Positives = 42/156 (26%), Gaps = 2/156 (1%) Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 I+ E I+ ++ + L+ Q L++ L+ + + K + + Sbjct: 169 KIDDESISSVELQQSRQLILAQFNTYLLQQQKAAALLDQKQAEYITIK--MQINKYRSLQ 226 Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164 + N + ++ Q + + + + + N+ + + E Sbjct: 227 KLEKEKTNDLANLLKSNAISKHQYLEQKARFLDINNEILTLESRLNEINAEIQQAKDEKE 286 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 T + + QK Sbjct: 287 LLTNTFTRDTQDALRQANEQIKQLVFEKEKYAERQK 322 >gi|107099020|ref|ZP_01362938.1| hypothetical protein PaerPA_01000028 [Pseudomonas aeruginosa PACS2] Length = 428 Score = 38.9 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 14/171 (8%), Positives = 48/171 (28%), Gaps = 14/171 (8%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + K + + E + + V + + + + + ++ + E R Sbjct: 265 RELAGKVSDKDAEAYYRRNLERYRNVAQVQAAHIRLADQASADKVYAELRSGLAFDEAVR 324 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLE--SDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 A G + L + L + + + P Sbjct: 325 R---------YSLADDRDRDPPGDLGLIRPQDGRLDLLRKTALIQKADTVSQPMRIDCAF 375 Query: 268 EYIAI---CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 E + + D++ + +++ ++ ++ ++ L + A + Sbjct: 376 EIVRVRSREDRQLPLDDRSVRFEVNQAVAREQLAAQFETRLRNLLAGARVE 426 >gi|326387876|ref|ZP_08209482.1| hypothetical protein Y88_0791 [Novosphingobium nitrogenifigens DSM 19370] gi|326207922|gb|EGD58733.1| hypothetical protein Y88_0791 [Novosphingobium nitrogenifigens DSM 19370] Length = 645 Score = 38.5 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 14/164 (8%), Positives = 47/164 (28%), Gaps = 25/164 (15%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSS------------RIRTTINGEVITDGDI 56 L F ++ + F ++ + ++ ++A + T+ I+ ++ Sbjct: 2 LGFFRAIIKSRFGAVLGLVFLVLIVLAFAGADVSGLRTGNLFGGDDVATVGHTGISSREL 61 Query: 57 SKRIA-------------LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103 K + +K + + + LI ++ +K+GI ++ Sbjct: 62 DKTVRAAFDGERQRTPTLTMKDFVTSQNALEEVLSGLIDRAAVQEWGQKNGIGVSDRLID 121 Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + G + ++ + + + Sbjct: 122 SEIAKLPAFQGPDGKFSQQVYNQLIAQRGLTDKQVREDIAKGLM 165 >gi|294618799|ref|ZP_06698326.1| foldase protein PrsA [Enterococcus faecium E1679] gi|291594987|gb|EFF26337.1| foldase protein PrsA [Enterococcus faecium E1679] Length = 336 Score = 38.5 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 29/312 (9%), Positives = 82/312 (26%), Gaps = 44/312 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 + + + + +++ T+ G IT D L + Sbjct: 4 KSIILAATSALAVLTLAACSGDTNKDIATMKGGTITVSDFYDEAKL-------KSSNQSL 56 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 VQ +I+ + K G V+ + + A++ G + E Q + K Sbjct: 57 VQRMIIYKV---FNNKYGDKVTDKQVDAEYDKQAKSLGDTFES-------QLEAAGYTKD 106 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + ++ + + ++ +++ ++ Sbjct: 107 TYKEYIRNNLAFEAGLKAHVDITDDDLKTAW-----KSFHPEVEAQIIKLSSEDEAKDVK 161 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF--QNLLKKS 253 + ++ GK ++ + P + K Sbjct: 162 KSA----------DDGDDFSKLAKDKSTDTETKEDGGKVKFDSTTTTIPAEVKEAAFKLK 211 Query: 254 QNNTTNPYVTQK------GVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKI--EKHEAEY 304 ++ T + + ++ G ++ K L T TK+ + Sbjct: 212 DGEISDVITTTNPTSYATEYYVVKMVKNQNKGNDMDKYKDQLKDIATETKLSDNAFTTKV 271 Query: 305 VKKLRSNAIIHY 316 + + +A + Sbjct: 272 IGEELKDANVKI 283 >gi|254478727|ref|ZP_05092097.1| hypothetical protein CDSM653_484 [Carboxydibrachium pacificum DSM 12653] gi|214035341|gb|EEB76045.1| hypothetical protein CDSM653_484 [Carboxydibrachium pacificum DSM 12653] Length = 238 Score = 38.5 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 17/152 (11%), Positives = 42/152 (27%), Gaps = 9/152 (5%) Query: 41 RIRTTINGEVITDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99 + +NG I + R L L ++ +Q+LI E +++ K I Sbjct: 65 DVIAEVNGIPIYKNEFELRKGLALASGVQADNIDDYVLQKLIKEKVQEYLASKYNIRVSE 124 Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL--------AIQSIWPDVVKND 151 + +N + + + E + +Y ++ + Sbjct: 125 SEINEYIEKEKKEFNEYPEAKKKLDELINASGMTEDEYWNTYERYNARRILLFNKLYNFI 184 Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 E++ ++Y + Sbjct: 185 VEEGMKKGELKKVEQMSSGTQNEYKKYFDDVI 216 >gi|86160366|ref|YP_467151.1| DsbA oxidoreductase [Anaeromyxobacter dehalogenans 2CP-C] gi|85776877|gb|ABC83714.1| DsbA oxidoreductase [Anaeromyxobacter dehalogenans 2CP-C] Length = 349 Score = 38.5 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 6/70 (8%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEKSGIT 96 + G+ IT G++ + + Q +L++ ++ +I + + + + GIT Sbjct: 35 VAKVGGQAITAGELDELVKSDLKQLEQQYEEQKYQLKRQGLESMIRRRVFEAKAKAEGIT 94 Query: 97 FDSNTVNYFF 106 D Sbjct: 95 PDELVNRDVV 104 >gi|17229417|ref|NP_485965.1| hypothetical protein alr1925 [Nostoc sp. PCC 7120] gi|17131015|dbj|BAB73624.1| alr1925 [Nostoc sp. PCC 7120] Length = 242 Score = 38.5 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 18/251 (7%), Positives = 59/251 (23%), Gaps = 21/251 (8%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 + + LK E+ + + + + + + Q Sbjct: 12 EEIVNFLKKNMQLKEVYQKILFQ---RLILQVAEARGITVTTEEIEAEANRQRREKRLEK 68 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 A D ++L Q ++ + + + + F K ++ +++ + Sbjct: 69 AADTMAWLADQLASPEDWEMGIRDRLLSQKLANFLFADKVEAFFIQNQLEFEQVSLYQII 128 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + + + F + ++ R G Sbjct: 129 VDSEKLAQEIYYQIEDEEISFYEAAYLYDVDAVRR-----------------QRCGYEGK 171 Query: 237 LLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 + L + + S +P T++G + + + Sbjct: 172 VYRFSLPVNVATVIFRTSPKQLISPLQTEQGYHLFMVEEFIPAELTGERYQEILNNMFNQ 231 Query: 296 KIEKHEAEYVK 306 + + + Sbjct: 232 WLITELNKILN 242 >gi|84500963|ref|ZP_00999198.1| hypothetical protein OB2597_02472 [Oceanicola batsensis HTCC2597] gi|84391030|gb|EAQ03448.1| hypothetical protein OB2597_02472 [Oceanicola batsensis HTCC2597] Length = 612 Score = 38.5 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 15/192 (7%), Positives = 35/192 (18%), Gaps = 13/192 (6%) Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 F + + + + + E + + + Sbjct: 200 FEPSEEDLRALYDELIEDFTLPERKRITYAWLTPEMILDQVEIDEDLLRQEYEARSDQYN 259 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 R R V I ++ + + + + + L Sbjct: 260 RPER-RLVERLIYADQGRAAEAADRLENGEADFETLVEERGLTLSDI----------DMG 308 Query: 236 YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 + +DL + P T G + + L E Sbjct: 309 DVSRADLGAAGDPVFAAESGEIVGPVETDLGPAFFRVNGI--LSAEETTFEEALPDLRQE 366 Query: 296 KIEKHEAEYVKK 307 V Sbjct: 367 LAFDRARRRVAN 378 >gi|257439957|ref|ZP_05615712.1| putative Tat pathway signal sequence [Faecalibacterium prausnitzii A2-165] gi|313114555|ref|ZP_07800068.1| Tat pathway signal sequence [Faecalibacterium cf. prausnitzii KLE1255] gi|257197564|gb|EEU95848.1| putative Tat pathway signal sequence [Faecalibacterium prausnitzii A2-165] gi|295103669|emb|CBL01213.1| hypothetical protein [Faecalibacterium prausnitzii SL3/3] gi|310623121|gb|EFQ06563.1| Tat pathway signal sequence [Faecalibacterium cf. prausnitzii KLE1255] Length = 176 Score = 38.5 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 S FIK LT + I ++ ++A S+ + T+ V+T ++ + A KL Sbjct: 2 STRKFIKKLTASLLFIA-VVMSFGVQSAFAESNSPKATVKNNVVTFSNLDQLKANEKL 58 >gi|219681828|ref|YP_002468214.1| peptidyl-prolyl cis-trans isomerase D [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471530|ref|ZP_05635529.1| peptidyl-prolyl cis-trans isomerase D [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219624671|gb|ACL30826.1| peptidyl-prolyl cis-trans isomerase D [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 623 Score = 38.5 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 26/260 (10%), Positives = 69/260 (26%), Gaps = 9/260 (3%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 + + L +++ I I KS N + + Sbjct: 137 ERYLNYLTSINSTNHEYINIIKKKINTENLIHTISKSNFILKKEEKNIIKLLSQKRIIKK 196 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 A + N Q ++ + F K +E++ K +N + Sbjct: 197 AIVKIDPSIYKKNITNQEAQIYFKKNQDNFYIPEKF--KINFVELKTDNFKIHCENKEIY 254 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-----DVSI 231 ++ I+ + K + K + A RL K A + Sbjct: 255 DWYIKNITQYSTKEKRRYSIIQVKNKQQAISILSRLHNTPEDFSKIAQEQSTDPISSKKD 314 Query: 232 GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291 G ++ + + ++ +N ++ + + + + + + Sbjct: 315 GDIGWISIDLIPDEIKHANLNKKNQISDVIPFHNEFLIVKLNETQIGTQKKIY--EVFDS 372 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 +K + +L++ Sbjct: 373 IKKQIKQKKSLDLYNELKNK 392 >gi|326391575|ref|ZP_08213106.1| hypothetical protein TheetDRAFT_2347 [Thermoanaerobacter ethanolicus JW 200] gi|325992405|gb|EGD50866.1| hypothetical protein TheetDRAFT_2347 [Thermoanaerobacter ethanolicus JW 200] Length = 241 Score = 38.5 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 16/171 (9%), Positives = 47/171 (27%), Gaps = 9/171 (5%) Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKIN-GELEKIAVQELIVETLKKQEIEKSGIT 96 + NG I + R L + ++ + +L+ E +K+ K + Sbjct: 62 NEGDVIAEANGIPIYKNEFELRKGLTFASEGQVNDINNFVLNKLVREKVKEYLAMKYNLK 121 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL--------AIQSIWPDVV 148 + +N + + + E + +++Y ++ + Sbjct: 122 VSEDEINSYIEKEKQQFKEFPEAEGKLKELISASGMTYEEYWNDYERYNVKRMLLFDKLY 181 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 N E++ ++Y + + K+ + Sbjct: 182 NAIINEGIKNGELKKTDKMTIEVQNEYKKYFDNIIDQYVKQAKISIDEKYK 232 >gi|293556277|ref|ZP_06674862.1| foldase protein PrsA [Enterococcus faecium E1039] gi|291601536|gb|EFF31803.1| foldase protein PrsA [Enterococcus faecium E1039] Length = 336 Score = 38.5 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 28/312 (8%), Positives = 81/312 (25%), Gaps = 44/312 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 + + + + +++ T+ G IT D L + Sbjct: 4 KSIILAATSALAVLTLAACSGDTNKDIATMKGGTITVSDFYDEAKL-------ESSNQSL 56 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 VQ +I+ + K G V+ + + A++ G + E Q + K Sbjct: 57 VQRMIIYKV---FNNKYGDKVTDKQVDAEYDKQAKSLGDTFES-------QLEAAGYTKD 106 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + ++ + + ++ +++ ++ Sbjct: 107 TYKEYIRNNLAFEAGLKAHVDITDDDLKTAW-----KSFHPEVEAQIIKLSSEDEAKDVK 161 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF--QNLLKKS 253 + ++ GK ++ + P + K Sbjct: 162 KSA----------DDGDDFSKLAKDKSTDTETKEDGGKVKFDSTTTTIPAEVKEAAFKLK 211 Query: 254 QNNTTNPYVTQK------GVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKI--EKHEAEY 304 ++ T + + ++ G ++ K L T K+ + Sbjct: 212 DGEISDVITTTNPTSYATEYYVVKMVKNQNKGNDMDKYKDQLKDIATEIKLSDNAFTTKV 271 Query: 305 VKKLRSNAIIHY 316 + + +A + Sbjct: 272 IGEELKDANVKI 283 >gi|317009631|gb|ADU80211.1| peptidyl-prolyl cis-trans isomerase D [Helicobacter pylori India7] Length = 487 Score = 38.5 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 33/313 (10%), Positives = 85/313 (27%), Gaps = 20/313 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK +EL + +K +EKS DS A + GL A Sbjct: 61 RRLKDAYAESIPN---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISTLFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPNDVKISLNEEEMKKYYESHKKDFKKPTRFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EKHEAEYVKKLRS 310 + L+ Sbjct: 284 NEKALRSYVALKK 296 >gi|190891851|ref|YP_001978393.1| peptidyl-prolyl cis-trans isomerase D signal peptide protein [Rhizobium etli CIAT 652] gi|190697130|gb|ACE91215.1| peptidyl-prolyl cis-trans isomerase D signal peptide protein [Rhizobium etli CIAT 652] Length = 630 Score = 38.5 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 27/396 (6%), Positives = 79/396 (19%), Gaps = 86/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI--------T 52 M + + ++ L ++ F I + SS T+ + + Sbjct: 1 MFHFLRRAAQTWVAKLLLLLLVASFGIWGVSRELISGGSSTTVVTVGDQHVGVNEFHLAY 60 Query: 53 DGDISKRIALLKLQKINGELE-----KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 ++ ++ + + + +L+ Q E + + + Sbjct: 61 QRQVASLSQQFGMRLTPEQARAFGVEQQVLSQLVAGASLDQLAEDMNLGLSEDRLAQLIG 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM-------------- 153 ++ + + + + V Sbjct: 121 DDPAFKAVNGQFDRELFVSRLRNAGIRQDDYIKERSKVAVRSQIVDAVSNGFTAPKTLVD 180 Query: 154 ----------------------LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 ++ A + R R + + Sbjct: 181 ALKLYGDESRSVDYLLLTNANIEPIKAPADDVLAAWFEGVKQRYRAPEYRKIAYLKLQPA 240 Query: 192 LQNQGFV--------------------QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 + R + + + + D + Sbjct: 241 DIADAATVTDDQVREAFDKGKDSYRTPESRTIEQLTFTSKDLAAAAETALKSGTSFDQLV 300 Query: 232 GKAQYLLESDLHPQFQNLLKKSQ------------NNTTNPYVTQKGVEYIAICDKR--D 277 L +F Q TT G + I + + Sbjct: 301 SDQGKTASDVLLGEFTKDKVPDQAVADAAFAVSKDGGTTPVVDGSFGPVILRITNIKAET 360 Query: 278 LGGEIALKAYLSAQN-TPTKIEKHEA--EYVKKLRS 310 +K + Q ++ ++++ LR+ Sbjct: 361 TKNFDEVKDEIRKQLALSNASQEVINVHDHIEDLRA 396 >gi|307293346|ref|ZP_07573192.1| peptidyl-prolyl cis-trans isomerase D [Sphingobium chlorophenolicum L-1] gi|306881412|gb|EFN12628.1| peptidyl-prolyl cis-trans isomerase D [Sphingobium chlorophenolicum L-1] Length = 649 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 16/172 (9%), Positives = 39/172 (22%), Gaps = 22/172 (12%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVS----------YKSWAMSSRIRTTINGEVITDG 54 + + FI+ F +IF + + + S S G +T Sbjct: 1 MLSVFRRFIRSKFGAFTALIFLAIIAAAFIMGDITSGKFGSSIGSGETVAKAGGSKLTMA 60 Query: 55 DISKRIALLKLQKINGEL------------EKIAVQELIVETLKKQEIEKSGITFDSNTV 102 + R+ + +L+ K+ + V Sbjct: 61 EFQDRVQRVFENARRSNPGLQIGDFLAQGGGAQVYDQLVASMTLKEYAGDQKVHISKRLV 120 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154 + Q + + + + +Q L + + Sbjct: 121 DAQIAQIPAFQDAAGNFSQENFRQLLLRERITEQALRDDIGREILERQMLAP 172 >gi|208434878|ref|YP_002266544.1| peptidyl-prolylcis-transisomerase D [Helicobacter pylori G27] gi|208432807|gb|ACI27678.1| peptidyl-prolylcis-transisomerase D [Helicobacter pylori G27] Length = 505 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 35/320 (10%), Positives = 89/320 (27%), Gaps = 21/320 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 19 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 78 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK + +EL + +K +EKS DS A + GL A Sbjct: 79 RRLKDAYAESIPD---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 133 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 134 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISTLFPKTTTP 193 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 194 LEQSSLSLWAKLQDKLDILILNPNDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 253 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 254 AGLEKTDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 301 Query: 298 EKHEAEYVKKLRSNAIIHYY 317 + L+ A + Y Sbjct: 302 NEKALRSYIALK-KANVQNY 320 >gi|75910582|ref|YP_324878.1| hypothetical protein Ava_4385 [Anabaena variabilis ATCC 29413] gi|75704307|gb|ABA23983.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length = 252 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 18/251 (7%), Positives = 58/251 (23%), Gaps = 21/251 (8%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 + + LK E+ + + + + + K + Q Sbjct: 12 EEIVNFLKKNMQLKEVYQKILFQ---RLILQVAEAKGITVTTEEIESEANRQRREKRLEK 68 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 A D ++L ++ + + + + F K ++ +++ + Sbjct: 69 AADTLAWLTDHLASPEDWEMGIRDRLLSQKLANFLFADKVEAFFLQNQLEFEQVSLYQII 128 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + + + F + ++ R G Sbjct: 129 VNSEKLAQEIYYQIEDEEISFYEAAYLYDVDAVRR-----------------QRCGYEGK 171 Query: 237 LLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 + L + + S +P T +G + + + Sbjct: 172 VYRFSLPVNVATVIFRTSPKQLISPLQTDQGYHLFMVEEFIPAELTGERYQEILNNMFNQ 231 Query: 296 KIEKHEAEYVK 306 + + + Sbjct: 232 WLITELNKILN 242 >gi|332883586|gb|EGK03867.1| hypothetical protein HMPREF9456_01408 [Dysgonomonas mossii DSM 22836] Length = 708 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 26/244 (10%), Positives = 70/244 (28%), Gaps = 19/244 (7%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI- 60 K+ + S I ++ + + I S+ + + T++GEV+T RI Sbjct: 4 LQKIRSKSSLLIGVIALGLLAFVLPWSEISSFINKSKDK--AFTVDGEVVTTRQYQDRIA 61 Query: 61 -----------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 + ++ ++ Q+++ E + ++ + G+ +N Sbjct: 62 QWEHFQKIMSGQNSLDENATLQIREMVYQQMVKEIILDKQAAQLGLNVTKEELNDMVT-- 119 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 A F++ Q I + + + E++ Sbjct: 120 ---GPNVAPILHQIPFFVNPQTGQFERAALNQFIQTISQDDTNLPENQRAEIQARREIWT 176 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 ++ + +I + K D +++ + K A + Sbjct: 177 FIQNMMKYQRLEEKYSAIVAGIVIPTDTEAKSAFDDSKTQASISYVVQKYASIADSLVAK 236 Query: 230 SIGK 233 + Sbjct: 237 EVTD 240 >gi|332707265|ref|ZP_08427318.1| Parvulin-like peptidyl-prolyl isomerase [Lyngbya majuscula 3L] gi|332353999|gb|EGJ33486.1| Parvulin-like peptidyl-prolyl isomerase [Lyngbya majuscula 3L] Length = 149 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 12/142 (8%), Positives = 40/142 (28%), Gaps = 11/142 (7%) Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 ++ + + + ++ +Q + ++ + ++ Sbjct: 18 DKVEPYFFENQLDYAGVVMYEVII--------DDQDLAMELFYGIQKGEMSFYDVAHQYI 69 Query: 221 KFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 + K G + + P+ + P VT KGV I + + + Sbjct: 70 Q--DKELRRYGGYQGVVTREQIKPEISAAVFAAKPPEVLKPIVTSKGVHLILVEEIIEPQ 127 Query: 280 GEIALKAYLSAQNTPTKIEKHE 301 + L++ + ++ Sbjct: 128 LDDKLRSQILLNLFSEWTKQQV 149 >gi|298503010|ref|YP_003724950.1| peptidylprolyl isomerase [Streptococcus pneumoniae TCH8431/19A] gi|298238605|gb|ADI69736.1| peptidylprolyl isomerase [Streptococcus pneumoniae TCH8431/19A] Length = 344 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 79/313 (25%), Gaps = 41/313 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L + ++ K + I G+VIT+ +++ N + Sbjct: 34 KKLLAGAITLLSVATLAACSKGSEGADLISMK--GDVITEHQFYEQVK------NNPSAQ 85 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++ + I + +KQ + +T+ Q+ N L+ Sbjct: 86 QVLLNMTIQKVFEKQYGSELDDKEVDDTIAEEKKQYGENYQRVLSQAGMTLET------- 138 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 Q +V+ E E+ K + ++ ++K + Sbjct: 139 ----RKAQIRTSKLVELAVK---KVAEAELTDEAYKKAFDEYTPDVTAQIIRLNNEDKAK 191 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLK 251 K + K ++ + G+ + S P+ + Sbjct: 192 EVLEKAKAEGADFAQLAKDNSTDEKTKE--------NGGEITFDSASTEVPEQVKKAAFA 243 Query: 252 KSQNNTTNPYVT------QKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK--HEA 302 + ++ + + K + I K L K Sbjct: 244 LDVDGVSDVITATGTQAYSSQYYIVKLTKKTEKSSNIDDYKEKLKTVILTQKQNDSTFVQ 303 Query: 303 EYVKKLRSNAIIH 315 + K A I Sbjct: 304 SIIGKELQAANIK 316 >gi|317182276|dbj|BAJ60060.1| hypothetical protein HPF57_0986 [Helicobacter pylori F57] Length = 487 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 89/317 (28%), Gaps = 21/317 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK +EL + +K +EKS DS A + GL A Sbjct: 61 RRLKDAYAESIPN---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISALFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPNDIKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EK-HEAEYVKKLRSNAI 313 + Y+ ++NA Sbjct: 284 NEKALRSYIALKKANAQ 300 >gi|309378642|emb|CBX22713.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 251 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 12/166 (7%), Positives = 44/166 (26%), Gaps = 9/166 (5%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V + + E ++ + ++ E Q + + A+ Sbjct: 85 VQNRFKIAEASFYAQEYVRFLERSETVSESELRQFYERQIRMIKLQQVGFATEDEARQAQ 144 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTT-NPYVTQ 264 + L+ ++++ + +++ L + ++ + T +P Sbjct: 145 QLLLKGLSFEGLMKRYPNDEQAFD----GFIMAQQLPEPLASQFAGMNRGDVTRDPIRLG 200 Query: 265 KGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + D ++ L K +++ Sbjct: 201 GRYYLFKLSEVGKNPDAQPFELVRNQLEQGLKQEKARLKIDALLEE 246 >gi|313667752|ref|YP_004048036.1| hypothetical protein NLA_4070 [Neisseria lactamica ST-640] gi|313005214|emb|CBN86647.1| hypothetical protein NLA_4070 [Neisseria lactamica 020-06] Length = 252 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 12/166 (7%), Positives = 45/166 (27%), Gaps = 9/166 (5%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V + + E ++ + ++ E + Q + + A+ Sbjct: 86 VQNRFKIAEASFYAQEYVRFLERSETVSEDELRAFYERQTRMVKLQQVGFATEGEARQAQ 145 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTT-NPYVTQ 264 + L+ ++++ + +++ L + ++ + T +P Sbjct: 146 QLLLKGLSFEGLMKRYPNDEQAFD----GFIMAQQLPEPLASQFAGMNRGDVTRDPIRLG 201 Query: 265 KGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + D ++ L K +++ Sbjct: 202 GRYYLFKLSEVGKNPDAQPFELVRNQLEQGLKQEKARLKIDALLEE 247 >gi|307708615|ref|ZP_07645079.1| foldase protein PrsA [Streptococcus mitis NCTC 12261] gi|307615364|gb|EFN94573.1| foldase protein PrsA [Streptococcus mitis NCTC 12261] Length = 312 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 79/313 (25%), Gaps = 41/313 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L + ++ K + I G+VIT+ +++ Sbjct: 3 KKLLAGAITLLSVATLAACSKGSEGADLISMK--GDVITEHQFYEQVKSNPS-------- 52 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 A Q L+ T++K ++ G D VN + + G + + Sbjct: 53 --AQQVLLNMTIQKVFEKQYGSEVDDKEVNDTIAEEEKQYGENYQRVL-------SQAGM 103 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + Q +V+ E E+ + K + ++ ++K + Sbjct: 104 TLETRKAQIRTSKLVELAVK---KAAEAELTDDAYKKAYDEYTPDVTAQIIRLDNEDKAK 160 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLK 251 K + K + + G+ + S P + Sbjct: 161 EVLEKAKASDADFAQLAKDNSTDEKTKA--------NGGEITFDSASTEVPDQVKKAAFA 212 Query: 252 KSQNNTTNPYVT------QKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHE--A 302 N ++ + + K + I K L K Sbjct: 213 LDVNGVSDVISVTGTQAYSSQYYIVKLIKKTEKSSNIDDYKEKLKTVILTQKQNDASFVQ 272 Query: 303 EYVKKLRSNAIIH 315 + K A I Sbjct: 273 SIIGKELQAANIK 285 >gi|302391506|ref|YP_003827326.1| hypothetical protein Acear_0721 [Acetohalobium arabaticum DSM 5501] gi|302203583|gb|ADL12261.1| TPR repeat-containing protein [Acetohalobium arabaticum DSM 5501] Length = 404 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 47/143 (32%), Gaps = 9/143 (6%) Query: 43 RTTINGEVITDGDISKRIALLKLQKING-------ELEKIAVQELIVETLKKQEIEKSGI 95 +N + I D + + + Q L+ +Q++I + L Q+ ++ I Sbjct: 55 IAVVNDKPIRYQDFQRGLQRFQQQSQRPIGNSQVLALKNRVLQQMIDQELLLQKAKEENI 114 Query: 96 --TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 V +NTG S ++ + L +G K+ L ++ Sbjct: 115 TVNISDQEVETQLDNWIKNTGRSRKEIENLLSDRGSSIAQVKKQLKEGMHKQKLINRMVQ 174 Query: 154 LKYGNLEMEIPANKQKMKNITVR 176 +E+ K + T + Sbjct: 175 QAQDGVEVTEKELKDAYEKSTEK 197 >gi|289167826|ref|YP_003446095.1| peptidylprolyl isomerase [Streptococcus mitis B6] gi|288907393|emb|CBJ22230.1| peptidylprolyl isomerase [Streptococcus mitis B6] Length = 312 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 80/313 (25%), Gaps = 41/313 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L + ++ K + I G+VIT+ +++ N + Sbjct: 3 KKLLAGAITLLSVATLAACSKGSEGADLISMK--GDVITEHQFYEQVKS------NPSAQ 54 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++ + I + +KQ + ++T+ Q+ N L+ Sbjct: 55 QVLLNLTIQKVFEKQYGSEVDDKEVNDTIAEEEKQYGENYQRVLSQAGMTLET------- 107 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 Q +V+ E E+ + K + ++ ++K + Sbjct: 108 ----RKAQIRTSKLVELAVK---KAAEAELTDDAYKKAFDEYTPDVTAQIIRLDNEDKAK 160 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLK 251 K + K + + G+ + S P+ + Sbjct: 161 EILEKAKASDADFAQLAKDNSTDEKTKA--------NGGEITFDSASTEVPEQVKKAAFA 212 Query: 252 KSQNNTTNPYVT------QKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHE--A 302 N ++ + + K + I K L K Sbjct: 213 LDVNGISDVISVTGTQAYSSQYYIVKLIKKTEKSSNIDDYKEKLKTVILTQKQNDASFVQ 272 Query: 303 EYVKKLRSNAIIH 315 + K A I Sbjct: 273 SIIGKELQAANIK 285 >gi|262193738|ref|YP_003264947.1| hypothetical protein Hoch_0413 [Haliangium ochraceum DSM 14365] gi|262077085|gb|ACY13054.1| hypothetical protein Hoch_0413 [Haliangium ochraceum DSM 14365] Length = 549 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 25/296 (8%), Positives = 71/296 (23%), Gaps = 27/296 (9%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQKINGELEKIAVQELIVETLKK 87 + A T++G +T D+ + A ++ + E + LI + Sbjct: 92 FDVAIAGAPDPDTAGTVDGVAVTMRDLESQSVGAFARIAERIYEARDRGWRWLIERVALE 151 Query: 88 QEIEKSGITFDS---NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 ++G+ + +D + + + +Q+ Sbjct: 152 HVARQAGMPLIPYLLSEYAKLPPPTDEQLAGVLQDMAFAEMGEDELLAAGRSVWRLQAWD 211 Query: 145 PD----VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 V + + + + I + V + + + Q + + Sbjct: 212 ARRAELVNQGRAAVPFERVRRRISDPEFAKPETEVARLGGQPITRAEQRVLAGYQAALAQ 271 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260 L ++ V + + + + + ++ Sbjct: 272 HEYWRIAKMQFDKYVDRFLLAREAEALAVEVSELEQMERGRMPAVSDAEVRAFIAENPEY 331 Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 Q G + + +K+LR+ A I + Sbjct: 332 KTAQNGF------------------ERARDNVRRLREQGAYESLLKRLRAAADIRF 369 >gi|296127129|ref|YP_003634381.1| hypothetical protein Bmur_2107 [Brachyspira murdochii DSM 12563] gi|296018945|gb|ADG72182.1| conserved hypothetical protein [Brachyspira murdochii DSM 12563] Length = 484 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 27/280 (9%), Positives = 77/280 (27%), Gaps = 11/280 (3%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 + I D+ K K + ++ I ++ + K+ + Sbjct: 204 AAIVQSNEIAVNDLEKYFTDNKTNFVQADISWIMLES----GGVADNLYKTLKDDITLFE 259 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 + + N Q + + N + ++ Sbjct: 260 KSALEKGLNTNNYKLGYITKMQMPSDDFANKIFSDNKGQKLLEPIYANGYYYIVLVNDIR 319 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 IP + ++ + + ++ + + Q V K + RL + Sbjct: 320 IPEKYTDVNQNVLKNEYLNANINTLLEAEKTKQAEVLKAAAANINNLQRLNGNGYIRYYR 379 Query: 223 ASKIHDVSIGKAQYLLESDLHP-----QFQNLLKKSQNNTTNPYVTQKGVEYIAI--CDK 275 S+ + G+ + + + + ++ N ++ GV I + +K Sbjct: 380 PSQPFSYNQGRLSTVDGTIIPDSSTEAFYNHVFSLQTNTVSDVIKLDNGVAVIKLISEEK 439 Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 ++ L + +I + E+ + + A + Sbjct: 440 PNMTASYTLNSDNMNAIKRQRINNIQIEWENENIAKARVK 479 >gi|255965590|gb|ACU45098.1| peptidyl-prolyl cis-trans isomerase [Pfiesteria piscicida] Length = 190 Score = 38.5 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 13/119 (10%), Positives = 30/119 (25%), Gaps = 1/119 (0%) Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + + + + L + +DV +G + Sbjct: 67 EKKAELIRKKMTGATLEEVAKSTGSSVLTANDVILGNTIMPNVGQEPKVVGTAFALATGK 126 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 T+ GV I + A + ++ + + Y + L+ A I Sbjct: 127 TSKLIDGNSGVFIIRAKSVIEAPAVNAYTSQITQEMQTQQNNAQMRAY-EALKDKATIK 184 >gi|251782838|ref|YP_002997141.1| foldase protein PrsA [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391468|dbj|BAH81927.1| peptidyl-prolyl cis-trans isomerase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323127643|gb|ADX24940.1| foldase protein PrsA [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 355 Score = 38.5 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 30/303 (9%), Positives = 77/303 (25%), Gaps = 26/303 (8%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 ++ V ++ + ++ G+ I+ D ++ + K Sbjct: 6 KLIAGIVTLASVMTLTACQSTNDNTKVISMKGDTISVSDFYNETKHTEVSQ------KAM 59 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 + ++ + Q +K N Q+ + + S + + Sbjct: 60 LNLVVSRVFEAQYGDKVSNKEVEKAYNKTADQYGASFSAALAQSSLTPETY---KKQIRS 116 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 ++ + K + + E + I + + + + Sbjct: 117 SKLVEYAVRETAKKELTTEAYKKAYETYTPTMAAQVIALDSEETAKSVLEELKAEGADFA 176 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 + K A + ++ D A + S L E D+ Sbjct: 177 AIAKEKTTAADKKIAYKFDSGATSLPADVVKAASG-----LKEGDMSEVIS--------- 222 Query: 257 TTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAI 313 +P Q + + K + + K L A K + + + K A Sbjct: 223 VLDPATYQNKFYIVKVTKKAEKKADWKVYKKRLKAIILAEKTRDMNFQNKIIAKALDKAN 282 Query: 314 IHY 316 + Sbjct: 283 VKI 285 >gi|15902928|ref|NP_358478.1| foldase protein PrsA [Streptococcus pneumoniae R6] gi|116517083|ref|YP_816350.1| foldase protein PrsA [Streptococcus pneumoniae D39] gi|148984724|ref|ZP_01817992.1| protease maturation protein, putative [Streptococcus pneumoniae SP3-BS71] gi|148988426|ref|ZP_01819873.1| protease maturation protein, putative [Streptococcus pneumoniae SP6-BS73] gi|148992883|ref|ZP_01822502.1| protease maturation protein, putative [Streptococcus pneumoniae SP9-BS68] gi|148998582|ref|ZP_01826022.1| protease maturation protein, putative [Streptococcus pneumoniae SP11-BS70] gi|149002533|ref|ZP_01827467.1| protease maturation protein, putative [Streptococcus pneumoniae SP14-BS69] gi|149006340|ref|ZP_01830052.1| protease maturation protein, putative [Streptococcus pneumoniae SP18-BS74] gi|149019573|ref|ZP_01834892.1| protease maturation protein, putative [Streptococcus pneumoniae SP23-BS72] gi|168491071|ref|ZP_02715214.1| foldase protein PrsA [Streptococcus pneumoniae CDC0288-04] gi|169834173|ref|YP_001694426.1| foldase protein PrsA [Streptococcus pneumoniae Hungary19A-6] gi|221231743|ref|YP_002510895.1| foldase protein PrsA precursor [Streptococcus pneumoniae ATCC 700669] gi|225854485|ref|YP_002735997.1| foldase protein PrsA [Streptococcus pneumoniae JJA] gi|225861132|ref|YP_002742641.1| foldase protein PrsA [Streptococcus pneumoniae Taiwan19F-14] gi|237821321|ref|ZP_04597166.1| foldase protein PrsA [Streptococcus pneumoniae CCRI 1974M2] gi|298229543|ref|ZP_06963224.1| foldase protein PrsA [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254488|ref|ZP_06978074.1| foldase protein PrsA [Streptococcus pneumoniae str. Canada MDR_19A] gi|307127469|ref|YP_003879500.1| foldase protein PrsA [Streptococcus pneumoniae 670-6B] gi|46396912|sp|Q8DQ24|PRSA_STRR6 RecName: Full=Foldase protein prsA; Flags: Precursor gi|122278764|sp|Q04KU8|PRSA_STRP2 RecName: Full=Foldase protein prsA; Flags: Precursor gi|226712007|sp|B1IBE1|PRSA_STRPI RecName: Full=Foldase protein prsA; Flags: Precursor gi|254783414|sp|B8ZPD9|PRSA_STRPJ RecName: Full=Foldase protein prsA; Flags: Precursor gi|254783415|sp|C1CDX6|PRSA_STRZJ RecName: Full=Foldase protein prsA; Flags: Precursor gi|254783417|sp|C1CRR9|PRSA_STRZT RecName: Full=Foldase protein prsA; Flags: Precursor gi|15458489|gb|AAK99688.1| Proteinase maturation protein [Streptococcus pneumoniae R6] gi|116077659|gb|ABJ55379.1| protease maturation protein, putative [Streptococcus pneumoniae D39] gi|147755580|gb|EDK62627.1| protease maturation protein, putative [Streptococcus pneumoniae SP11-BS70] gi|147759470|gb|EDK66462.1| protease maturation protein, putative [Streptococcus pneumoniae SP14-BS69] gi|147762117|gb|EDK69079.1| protease maturation protein, putative [Streptococcus pneumoniae SP18-BS74] gi|147923115|gb|EDK74230.1| protease maturation protein, putative [Streptococcus pneumoniae SP3-BS71] gi|147926107|gb|EDK77181.1| protease maturation protein, putative [Streptococcus pneumoniae SP6-BS73] gi|147928335|gb|EDK79351.1| protease maturation protein, putative [Streptococcus pneumoniae SP9-BS68] gi|147930948|gb|EDK81928.1| protease maturation protein, putative [Streptococcus pneumoniae SP23-BS72] gi|168996675|gb|ACA37287.1| foldase protein PrsA [Streptococcus pneumoniae Hungary19A-6] gi|183574699|gb|EDT95227.1| foldase protein PrsA [Streptococcus pneumoniae CDC0288-04] gi|220674203|emb|CAR68731.1| foldase protein PrsA precursor [Streptococcus pneumoniae ATCC 700669] gi|225723485|gb|ACO19338.1| foldase protein PrsA [Streptococcus pneumoniae JJA] gi|225726693|gb|ACO22544.1| foldase protein PrsA [Streptococcus pneumoniae Taiwan19F-14] gi|301794118|emb|CBW36524.1| foldase protein PrsA precursor [Streptococcus pneumoniae INV104] gi|301799956|emb|CBW32539.1| foldase protein PrsA precursor [Streptococcus pneumoniae OXC141] gi|306484531|gb|ADM91400.1| foldase protein PrsA [Streptococcus pneumoniae 670-6B] gi|332076253|gb|EGI86719.1| PPIC-type PPIASE domain protein [Streptococcus pneumoniae GA41301] gi|332204982|gb|EGJ19047.1| PPIC-type PPIASE domain protein [Streptococcus pneumoniae GA47901] Length = 313 Score = 38.5 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 79/313 (25%), Gaps = 41/313 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L + ++ K + I G+VIT+ +++ N + Sbjct: 3 KKLLAGAITLLSVATLAACSKGSEGADLISMK--GDVITEHQFYEQVK------NNPSAQ 54 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++ + I + +KQ + +T+ Q+ N L+ Sbjct: 55 QVLLNMTIQKVFEKQYGSELDDKEVDDTIAEEKKQYGENYQRVLSQAGMTLET------- 107 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 Q +V+ E E+ K + ++ ++K + Sbjct: 108 ----RKAQIRTSKLVELAVK---KVAEAELTDEAYKKAFDEYTPDVTAQIIRLNNEDKAK 160 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLK 251 K + K ++ + G+ + S P+ + Sbjct: 161 EVLEKAKAEGADFAQLAKDNSTDEKTKE--------NGGEITFDSASTEVPEQVKKAAFA 212 Query: 252 KSQNNTTNPYVT------QKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK--HEA 302 + ++ + + K + I K L K Sbjct: 213 LDVDGVSDVITATGTQAYSSQYYIVKLTKKTEKSSNIDDYKEKLKTVILTQKQNDSTFVQ 272 Query: 303 EYVKKLRSNAIIH 315 + K A I Sbjct: 273 SIIGKELQAANIK 285 >gi|225856639|ref|YP_002738150.1| foldase protein PrsA [Streptococcus pneumoniae P1031] gi|254783416|sp|C1CK62|PRSA_STRZP RecName: Full=Foldase protein prsA; Flags: Precursor gi|225725282|gb|ACO21134.1| foldase protein PrsA [Streptococcus pneumoniae P1031] Length = 313 Score = 38.5 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 79/313 (25%), Gaps = 41/313 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L + ++ K + I G++IT+ +++ N + Sbjct: 3 KKLLAGAITLLSVATLAACSKGSEGADLISMK--GDIITEHQFYEQVK------NNPSAQ 54 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++ + I + +KQ + +T+ Q+ N L+ Sbjct: 55 QVLLNMTIQKVFEKQYGSELDDKEVDDTIAEEKKQYGENYQRVLSQAGMTLET------- 107 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 Q +V+ E E+ K + ++ ++K + Sbjct: 108 ----RKAQIRTSKLVELAVK---KVAEAELTDEAYKKAFDEYTPDVTAQIIRLNNEDKAK 160 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLK 251 K + K ++ + G+ + S P+ + Sbjct: 161 EVLEKAKAEGADFAQLAKDNSTDEKTKE--------NGGEITFDSASTEVPEQVKKAAFA 212 Query: 252 KSQNNTTNPYVT------QKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK--HEA 302 + ++ + + K + I K L K Sbjct: 213 LDVDGVSDVITATGTQAYSSQYYIVKLTKKTEKSSNIDDYKEKLKTVILTQKQNDSTFVQ 272 Query: 303 EYVKKLRSNAIIH 315 + K A I Sbjct: 273 SIIGKELQAANIK 285 >gi|254779571|ref|YP_003057677.1| putative pedidyl-prolyl cis-trans ismerase D(PPIase D) (Rotamase D) [Helicobacter pylori B38] gi|254001483|emb|CAX29488.1| Putative pedidyl-prolyl cis-trans ismerase D(PPIase D) (Rotamase D) [Helicobacter pylori B38] Length = 487 Score = 38.5 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 33/313 (10%), Positives = 86/313 (27%), Gaps = 20/313 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK + +EL + +K +EKS DS A + GL A Sbjct: 61 RRLKDAYAESIPD---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVEKLLILQKISALFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPNDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EKHEAEYVKKLRS 310 + L+ Sbjct: 284 NEKALRSYVALKK 296 >gi|169347183|ref|ZP_02866124.1| hypothetical protein CPC_A0055 [Clostridium perfringens C str. JGS1495] gi|169296683|gb|EDS78813.1| hypothetical protein CPC_A0055 [Clostridium perfringens C str. JGS1495] Length = 66 Score = 38.5 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 13 IKLLTTYFVLIIFCI-VPIVSYKSWAMSSRIRTTINGEVITDGDISK 58 +K + +F+ + + ++ + + ++ +NG IT+ DI + Sbjct: 1 MKKIIGFFLALTVIFQLSAINVFATESNDKVIAIVNGIEITEKDIDE 47 >gi|154175271|ref|YP_001408420.1| WbnF [Campylobacter curvus 525.92] gi|112802934|gb|EAU00278.1| WbnF [Campylobacter curvus 525.92] Length = 485 Score = 38.5 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 19/243 (7%), Positives = 52/243 (21%), Gaps = 11/243 (4%) Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 L+ +IN + ++ I+ + D + + + E + Sbjct: 141 LRRARINPNDYEKNLKTAILLDKLYYALNLPATKKDVEMMMASLFMQDKLSIEMIEANEN 200 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + + + + + + Y Sbjct: 201 EIKFNEDEIKELWESNKNNYMTKTLY-------VIDTLYIESKKDDINQTALSAYYNENK 253 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 + D+K+ V++ + K + L E + Sbjct: 254 EKYKNSDDKIMPFDEVKEEVAKDYNIEQSKTNALEKYIAVKKGELATNGSM--SLNEDNA 311 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKH 300 + + P+V G + I K + K+++ Sbjct: 312 TFSIDEIRGAKVGDVIKPFVYDNGYLIVKIKSTTPPQPMSYEQAKEQILEIYKEQKLKEL 371 Query: 301 EAE 303 Sbjct: 372 VEN 374 >gi|14582889|gb|AAK69701.1|AF356511_1 putative peptidyl-prolyl cis-trans isomerase D [Anaplasma phagocytophilum] Length = 575 Score = 38.5 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 15/166 (9%), Positives = 49/166 (29%), Gaps = 9/166 (5%) Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFV 198 + + + E ++ + + + S ++ V Sbjct: 219 QKLFEEQYKNSLNFPEYRSADYIIMAEDDLLADVIVSDQEVDVEIKNSELHDQRDVLNLV 278 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNT 257 +AE + + + E + + + + + L +N++ ++ Sbjct: 279 FTDKNEAELAYKAYQEGKSFEELVSDAGYTIEDIALNNISKDVLPVGVRNVVFALNEGEV 338 Query: 258 TNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHE 301 + + + G + + K ++ E LK +S+ K + Sbjct: 339 SEMFRSVVGWHIMKVIRKHEITKEDLEKLKEKISSNIRRQKAGELL 384 >gi|317968435|ref|ZP_07969825.1| hypothetical protein SCB02_02756 [Synechococcus sp. CB0205] Length = 165 Score = 38.5 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 10/109 (9%), Positives = 33/109 (30%), Gaps = 1/109 (0%) Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN 259 + R + F+ + G + HP ++ L+ + Sbjct: 46 ANELYLRLSGREATFADLASDFSEGHEKKTCGIVGPAPLAKSHPHLRDQLRSADVGVVNP 105 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 P + + + + +++ + + +++ AE + +L Sbjct: 106 PIAVEDWFLIVRLESTIPAILDDSMRQLMEHELFEADVQQQAAELLGQL 154 >gi|171914553|ref|ZP_02930023.1| hypothetical protein VspiD_25280 [Verrucomicrobium spinosum DSM 4136] Length = 518 Score = 38.5 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 27/282 (9%), Positives = 78/282 (27%), Gaps = 24/282 (8%) Query: 47 NGEVITDGDISKRIALLKL-QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 NG T+ + + L + Q +G + ++ + + + + Sbjct: 117 NGVQATNEEAREAFRKLPIFQNKDGNFDGNVAEQFQNNIGALGLRDTDVFDVLRDWIGFK 176 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + + + + +++ + +DF + EI Sbjct: 177 RLHEIVAGNAVLNN-------NVSKQLYASTFQTVKAASIPFITDDFKKDAKPTDEEIAK 229 Query: 166 NKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 ++ K + + VLF+ PD + N K + Sbjct: 230 YYEEKKEAFKTAPKRAVSYVLFAKPDVEKLNAEDTVKARNEFAARVNDFGVAAIAPGAKL 289 Query: 224 SKIHDVSIGKAQYLLESDL--HPQFQNLLKKSQNNT----------TNPYVTQKGVEYIA 271 + + + + + P+ + ++P KG + + Sbjct: 290 EDVAKTAKVELKTEPLFTMEAPPEALKEEPGLVSEIFRIDPQNRPVSDPVEGAKGYYFFS 349 Query: 272 ICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + + + +K ++ Q T K ++ + + R Sbjct: 350 VTQEEEPKQQELAEVKEKVAEQLTSQKAQELMTKAASEARKK 391 >gi|225075435|ref|ZP_03718634.1| hypothetical protein NEIFLAOT_00440 [Neisseria flavescens NRL30031/H210] gi|224953253|gb|EEG34462.1| hypothetical protein NEIFLAOT_00440 [Neisseria flavescens NRL30031/H210] Length = 254 Score = 38.1 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 21/225 (9%), Positives = 51/225 (22%), Gaps = 6/225 (2%) Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 E DS + D + + Sbjct: 25 APEIDPARIDSMVAEVLRQADQHPNQTAKPDGQAIRKDVVTRLQTLEVLKNEAIKAGLDK 84 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIR-TVLFSIPDNKLQNQGFVQKRIKDAEE 207 + ++ N+E E AN+ F ++ V + Sbjct: 85 DAEVQNQFKNVEAEFYANQYAAYLERQTAVDDAELRRFYDQQTRIIKLQQVSFASAEEVR 144 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTT-NPYVTQK 265 + L E+ + + ++ L PQ ++ + T P + Sbjct: 145 AAQELLLKGLSFEELMKRYPNPEQEFDGFISPQQLPPQLATAFADMNRGDVTHEPIQMEN 204 Query: 266 GVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + ++ ++ K+E +K+ Sbjct: 205 RFYLFKLSAVERNPNAEPFELVRNQIAQAVKRQKVENQIERILKE 249 >gi|317012785|gb|ADU83393.1| putative pedidyl-prolyl cis-trans ismerase D(PPIase D) (Rotamase D) [Helicobacter pylori Lithuania75] Length = 487 Score = 38.1 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 32/313 (10%), Positives = 86/313 (27%), Gaps = 20/313 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + ++++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYNFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK + +EL + +K +EKS DS A + GL A Sbjct: 61 RRLKDAYAESIPD---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISALFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDRLDILILNPNDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EKHEAEYVKKLRS 310 + L+ Sbjct: 284 NEKALRSYVALKK 296 >gi|313498575|gb|ADR59941.1| SurA domain-containing protein [Pseudomonas putida BIRD-1] Length = 213 Score = 38.1 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 47/163 (28%), Gaps = 13/163 (7%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-----------RIALLKLQKINGEL 72 I + ++ + + +NG I + + + ++ + L Sbjct: 3 IVWLCLLLVLTRASWADVPAARVNGVEIGLMRLERYFSEYLDAQGRAVTSIRNPGLYKRL 62 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 A+ ELI + L QE ++ GI V+ + G A + G Sbjct: 63 RDQALDELIDKELLWQEAQRQGIAVSDEQVSAQVGEIEAAFGSPALFERRLAEA-GFDRA 121 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 + +Y + V + E+ A + Sbjct: 122 QYTEYTRHEMAAQQ-VYALLSAVDAPSQGEVEAFYDANQERLQ 163 >gi|206890921|ref|YP_002247897.1| hypothetical protein THEYE_A0043 [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742859|gb|ACI21916.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 196 Score = 38.1 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 49/158 (31%), Gaps = 13/158 (8%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT------DGD--- 55 + +L K F L+I V ++G+ I+ + + Sbjct: 1 MIKTLRKNAKYFYFLFFLVIITFVFWGVGTVDKPKVEYVADVDGQKISAERFWRNYEEIR 60 Query: 56 -ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHAR 111 + + K ++ L++ +++LI E + +K I V + R Sbjct: 61 RFYREVFKDKAAEMEQGLKEKVLEDLINEEILLWLAKKYEIEATDKEVQDAIVNDPRFMR 120 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 N + + L + ++ L + ++ Sbjct: 121 NGIFQRDIYFQILKLNRLNPAQYEASLKREITIGKTIQ 158 >gi|29840067|ref|NP_829173.1| hypothetical protein CCA00302 [Chlamydophila caviae GPIC] gi|29834415|gb|AAP05051.1| conserved hypothetical protein [Chlamydophila caviae GPIC] Length = 360 Score = 38.1 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 92/297 (30%), Gaps = 24/297 (8%) Query: 34 KSWAMSSRIRTTIN-GEVITDGDISKRIALLKLQKINGELEKI-------------AVQE 79 A+ R+ I+ V+T D+ +++ LL ++ ++ Sbjct: 46 AGIAIHDRVLFKIDEDNVVTTLDVIQKLNLLFASSYPQLMDSYPARSQYYTAMWPVVLES 105 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 +I E L + + I DS TVN A + + F N + L Sbjct: 106 VIDEFLMVADAKTKKIQVDSTTVNEEIE--AMFGRDLSPLYVHFDMTPEDVFNVVNRTLI 163 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199 Q + +V++ MLK ++ Q ++ V+ + + Sbjct: 164 AQRVMGMMVRSKVMLKVTPGKIR-EHYNQLAEDAANTTVWKYRVVTIKAATESLSSQIAD 222 Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL---LKKSQNN 256 K E++ + + L S + + +L + + Q Sbjct: 223 KVCARLNETQSWNKERLSALTLSQGGQFVCS--EEFTRNDKELSEAHKMELSSVNYPQTI 280 Query: 257 TTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + P + G + + DK + ++ + E++Y KLR+ Sbjct: 281 CSLPKAHKSGHKLYVLLDKSAMAMQPLEEMETQIKQTLFMNYAGTIESQYKMKLRTR 337 >gi|331216455|ref|XP_003320907.1| hypothetical protein PGTG_02929 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309299897|gb|EFP76488.1| hypothetical protein PGTG_02929 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 397 Score = 38.1 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 30/96 (31%), Gaps = 9/96 (9%) Query: 223 ASKIHDVSIGKAQY--LLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 A K + G + Y L S Q + Q G + + +++L Sbjct: 271 AIKHSKKNGGTSGYQLRLNSQGPIQLIGQHDNDSGVISA---NQAGSHVVKLKSRKELQA 327 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN--AII 314 E + + K + E KKLR A I Sbjct: 328 EKREHKATERKISAEM--KAQEELRKKLRKEQVARI 361 >gi|317180180|dbj|BAJ57966.1| hypothetical protein HPF32_0384 [Helicobacter pylori F32] Length = 487 Score = 38.1 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 33/313 (10%), Positives = 85/313 (27%), Gaps = 20/313 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSGSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK +EL + +K +EKS DS A + GL A Sbjct: 61 RRLKDAYAESIPN---FKELTEDQIKAIHLEKSA--LDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVEKLLILQKISTLFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPNDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EKHEAEYVKKLRS 310 + L+ Sbjct: 284 NEKALRSYVALKK 296 >gi|205355536|ref|ZP_03222307.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205346770|gb|EDZ33402.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 496 Score = 38.1 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 22/217 (10%), Positives = 59/217 (27%), Gaps = 15/217 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------- 63 + + + + + +Y S T+ E I + R + Sbjct: 14 VTIWVSTIAFVGAGFLGWGAYDFNLNRSSSVATVGNEKIGFSEFDTRYRQILSYYNQISN 73 Query: 64 ----KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 ++ IA+ L+ + L + GI + N + + + Sbjct: 74 GALTPENAEQLGIKNIALSSLVEDKLLLNFAKDLGIGVNENEILQKLANTREFQDPTGDF 133 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + + +N + Q + + N+ + K + +++ L Sbjct: 134 NKTIYYELLNANNLTPKDYETQLANEVITDKL--NQIFNIPSKDEELKMLASSYFMQDAL 191 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + N N+ ++K + +E Sbjct: 192 SIAKIDYDKKNIKINEEDLKKLWNEHKEDYKTKKIYE 228 >gi|317177768|dbj|BAJ55557.1| hypothetical protein HPF16_0960 [Helicobacter pylori F16] Length = 487 Score = 38.1 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 89/317 (28%), Gaps = 21/317 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK +EL + +K +EKS DS A + GL A Sbjct: 61 RRLKDAYAESIPN---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIKKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISTLFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPNDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EK-HEAEYVKKLRSNAI 313 + Y+ ++NA Sbjct: 284 NEKALRSYIALKKANAQ 300 >gi|198275842|ref|ZP_03208373.1| hypothetical protein BACPLE_02017 [Bacteroides plebeius DSM 17135] gi|198271471|gb|EDY95741.1| hypothetical protein BACPLE_02017 [Bacteroides plebeius DSM 17135] Length = 712 Score = 38.1 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 1/78 (1%) Query: 237 LLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 + S K + N + P GV I + K + K A T Sbjct: 628 VTRSSEPVIGAVAAKTAANKVSAPIKGNGGVYMIQVYAKEKGSEKFDAKQE-EATLTNMA 686 Query: 297 IEKHEAEYVKKLRSNAII 314 + + + L A + Sbjct: 687 VRIAGNQLINDLYQKAKV 704 >gi|315926808|gb|EFV06182.1| Putative periplasmic protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 496 Score = 38.1 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 22/217 (10%), Positives = 59/217 (27%), Gaps = 15/217 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------- 63 + + + + + +Y S T+ E I + R + Sbjct: 14 VTIWVSTIAFVGAGFLGWGAYDFNLNRSSSVATVGNEKIGFSEFDTRYRQILSYYNQISN 73 Query: 64 ----KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 ++ IA+ L+ + L + GI + N + + + Sbjct: 74 GALTPENAEQLGIKNIALSSLVEDKLLLNFAKDLGIGVNENEILQKLANTREFQDPTGDF 133 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + + +N + Q + + N+ + K + +++ L Sbjct: 134 NKTIYYELLNANNLTPKDYETQLANEVIADKL--NQIFNIPSKDEELKMLASSYFMQDAL 191 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + N N+ ++K + +E Sbjct: 192 SIAKIDYDKKNIKINEEDLKKLWNEHKEDYKTKKIYE 228 >gi|307151228|ref|YP_003886612.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cyanothece sp. PCC 7822] gi|306981456|gb|ADN13337.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cyanothece sp. PCC 7822] Length = 247 Score = 38.1 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 88/267 (32%), Gaps = 36/267 (13%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 IT DI K + + +++++ + ++ +K+GI ++ + + Sbjct: 5 ITPSDIFKAVQISCQI-------PEFIEQIVTRKIIEEAAKKAGIKIETEELQKAADEFR 57 Query: 111 RNTGLSAEDFSS-FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 L + + +L+K + + F++ + I I +V + F K A + Sbjct: 58 LGNQLQNAEDTWKWLEKYSLSLDSFEELVYINLISNKLVNHLFGDKI-------DAYFFQ 110 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + + VL +++ + +E + + ++ Sbjct: 111 NQLDYGGVVMYEVVL--------EDKDLALELFYGIQEGEMSFYEVAHQYIAEQELRRKC 162 Query: 230 SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 G + +L P+ + + P +T KGV I + + +K L Sbjct: 163 --GYLGMVNRKNLKPEISAVVFAANPPQVLKPIITSKGVHLILVEEI--------VKPEL 212 Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +++K+ A + Sbjct: 213 NQNLARKIAADLFTDWLKE--QIAQVE 237 >gi|217033935|ref|ZP_03439358.1| hypothetical protein HP9810_883g5 [Helicobacter pylori 98-10] gi|216943568|gb|EEC23016.1| hypothetical protein HP9810_883g5 [Helicobacter pylori 98-10] Length = 487 Score = 38.1 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 89/317 (28%), Gaps = 21/317 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSGSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK +EL + +K +EKS DS A + GL A Sbjct: 61 RRLKDAYAESIPN---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIKKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISTLFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPNDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EK-HEAEYVKKLRSNAI 313 + Y+ ++NA Sbjct: 284 NEKALRSYIALKKANAQ 300 >gi|17229421|ref|NP_485969.1| hypothetical protein alr1929 [Nostoc sp. PCC 7120] gi|17131019|dbj|BAB73628.1| alr1929 [Nostoc sp. PCC 7120] Length = 282 Score = 38.1 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 16/242 (6%), Positives = 58/242 (23%), Gaps = 2/242 (0%) Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 + K++V+++I ++ + + + E S Sbjct: 21 ANINMEKFLKLSVEDIITHLKVSFQMPSILEAIATQKIIADTAEKVGIELSVEELQQSAD 80 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + + +DF + + + + + + + Sbjct: 81 SMRFANRLLKADDTWNWLQKHYLTIDDFEEVAKSNLLHMKLAEHLFADKVEPFFYAHKID 140 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDL- 242 ++ ++ + ++ + G S+ Sbjct: 141 YTGAATYEVILDDEDLALELFYALQEGEISFQEIARQYIQSPETRRAGGYQGIRYRSEFR 200 Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 + + P +T KGV IA+ + + + + + +++ Sbjct: 201 PEIAAAVFAATPPQLLKPIITPKGVHIIAVEEIITPELDESRRVQILKDFFTHWLQQQIT 260 Query: 303 EY 304 Sbjct: 261 NL 262 >gi|86149807|ref|ZP_01068036.1| peptidyl-prolyl cis-trans isomerase D, homolog [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596914|ref|ZP_01100150.1| putative peptidyl-prolyl cis-trans isomerase D homolog [Campylobacter jejuni subsp. jejuni 84-25] gi|218562333|ref|YP_002344112.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839625|gb|EAQ56885.1| peptidyl-prolyl cis-trans isomerase D, homolog [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190603|gb|EAQ94576.1| putative peptidyl-prolyl cis-trans isomerase D homolog [Campylobacter jejuni subsp. jejuni 84-25] gi|112360039|emb|CAL34831.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925950|gb|ADC28302.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315929133|gb|EFV08360.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni 305] Length = 496 Score = 38.1 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 22/217 (10%), Positives = 59/217 (27%), Gaps = 15/217 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------- 63 + + + + + +Y S T+ E I + R + Sbjct: 14 VTIWVSTIAFVGAGFLGWGAYDFNLNRSSSVATVGNEKIGFSEFDTRYRQILSYYNQISN 73 Query: 64 ----KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 ++ IA+ L+ + L + GI + N + + + Sbjct: 74 GALTPENAEQLGIKNIALSSLVEDKLLLNFAKDLGIGVNENQILQKLANTREFQDPTGDF 133 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + + +N + Q + + N+ + K + +++ L Sbjct: 134 NKTIYYELLNANNLAPKDYETQLANEVITDKL--NQIFNIPSKDEELKMLASSYFMQDAL 191 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + N N+ ++K + +E Sbjct: 192 SIAKIDYDKKNIKINEEDLKKLWNEHKEDYKTKKIYE 228 >gi|83649456|ref|YP_437891.1| hypothetical protein HCH_06846 [Hahella chejuensis KCTC 2396] gi|83637499|gb|ABC33466.1| conserved hypothetical protein [Hahella chejuensis KCTC 2396] Length = 415 Score = 38.1 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 26/289 (8%), Positives = 79/289 (27%), Gaps = 19/289 (6%) Query: 43 RTTINGEVITDGDI-----SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97 TI + I + K +L+ + + E + + L V + + +K+ + Sbjct: 127 LATIAAKSILGYQLTPAQREKAASLVLARMAFPDQEDVTLTLLEVYEGQSIQGKKALMEG 186 Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND--FMLK 155 D + + ++ S + + ++ + +P ++ Sbjct: 187 DVKALGMEVLSWKQHQLRLW-WLSHEGGVEVDAIDDLQRTIKAHYFYPKILNALGVVKRN 245 Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV--QKRIKDAEESRLRLP 213 +G+ I +Q Y F + + A + ++ Sbjct: 246 HGDNPGLIRFREQVSAVQINSYYQRHQEDFRFLAKVKPRGAIYGDEAAARLARQQLMQGA 305 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHP---QFQNLLKKSQNNTTNPYVTQKG-VEY 269 + + + + G+ +L + + P + + G Sbjct: 306 SWADL-KTPSRPVSWPLDGE-GWLRKEAVKPTDWLASLAFATPPGEVSEVIRSPTGDWVI 363 Query: 270 IAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + + + ++ + +E + +LR A + Sbjct: 364 LQVSQREYGYYPPDSETVRYLATDVIAIQLAVTAYSELINQLRRQANLQ 412 >gi|57236997|ref|YP_178798.1| peptidyl-prolyl cis-trans isomerase D,-like protein [Campylobacter jejuni RM1221] gi|57165801|gb|AAW34580.1| peptidyl-prolyl cis-trans isomerase D, homolog [Campylobacter jejuni RM1221] gi|315058157|gb|ADT72486.1| Peptidyl-prolyl cis-trans isomerase ppiD [Campylobacter jejuni subsp. jejuni S3] Length = 496 Score = 38.1 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 22/217 (10%), Positives = 59/217 (27%), Gaps = 15/217 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------- 63 + + + + + +Y S T+ E I + R + Sbjct: 14 VTIWVSTIAFVGAGFLGWGAYDFNLNRSSSVATVGNEKIGFSEFDTRYRQILSYYNQISN 73 Query: 64 ----KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 ++ IA+ L+ + L + GI + N + + + Sbjct: 74 GALTPENAEQLGIKNIALSSLVEDKLLLNFAKDLGIGVNENEILQKLANTREFQDPTGDF 133 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + + +N + Q + + N+ + K + +++ L Sbjct: 134 NKTIYYELLNANNLAPKDYETQLANEVITDKL--NQIFNIPSKDEELKMLASSYFMQDAL 191 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + N N+ ++K + +E Sbjct: 192 SIAKIDYDKKNIKINEEDLKKLWNEHKEDYKTKKIYE 228 >gi|315586916|gb|ADU41297.1| peptidyl-prolyl cis-trans isomerase [Helicobacter pylori 35A] Length = 517 Score = 38.1 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 33/313 (10%), Positives = 85/313 (27%), Gaps = 20/313 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 31 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSGSAAKVGQIKISQEELAQEY 90 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK +EL + +K +EKS DS A + GL A Sbjct: 91 RRLKDAYAESIPN---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 145 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 146 EVAKEIKKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISALFPKTTTP 205 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 206 LEQSSLSLWAKLQDKLDILILNPNDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 265 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 266 ASLEKPDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 313 Query: 298 EKHEAEYVKKLRS 310 + L+ Sbjct: 314 NEKALRSYVALKK 326 >gi|294083766|ref|YP_003550523.1| Parvulin-like peptidyl-prolyl isomerase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663338|gb|ADE38439.1| Parvulin-like peptidyl-prolyl isomerase [Candidatus Puniceispirillum marinum IMCC1322] Length = 620 Score = 38.1 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 14/151 (9%), Positives = 33/151 (21%), Gaps = 18/151 (11%) Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 E I + D K N+ + Sbjct: 238 IEADVDISEDMIKDAFGTRIDEFSTPETRVVRQMVFEDAKKANEARAR------------ 285 Query: 212 LPKDCNKLEKFASKIHDVSIGK--AQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVE 268 A+ + + + + L + + + N T P T G Sbjct: 286 -VDQGEDFNAVAADMLNWTDTDVMLGTVTRDGLDGAIADAVFDASVNVVTGPVETLFGQH 344 Query: 269 YIAICDKRDLG--GEIALKAYLSAQNTPTKI 297 + + D + G ++ ++ + Sbjct: 345 ILIVDDITEGGNATLEDVRDEITRTLRSEEA 375 >gi|317178673|dbj|BAJ56461.1| hypothetical protein HPF30_0364 [Helicobacter pylori F30] Length = 487 Score = 38.1 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 34/317 (10%), Positives = 88/317 (27%), Gaps = 21/317 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK +EL + +K +EKS DS A + GL Sbjct: 61 RRLKDAYAESIPN---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGTTKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISALFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPNDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPDLKELEKYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EK-HEAEYVKKLRSNAI 313 + Y+ ++NA Sbjct: 284 NEKALRSYIALKKANAQ 300 >gi|309800306|ref|ZP_07694478.1| foldase protein PrsA [Streptococcus infantis SK1302] gi|308116053|gb|EFO53557.1| foldase protein PrsA [Streptococcus infantis SK1302] Length = 313 Score = 38.1 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 33/313 (10%), Positives = 75/313 (23%), Gaps = 41/313 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L + ++ S + I G+VIT+ + + N + Sbjct: 3 KKLMAGAITLLSVATLAACSNSSEGTDLISMK--GDVITEHQFFEEVK------NNATAQ 54 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++ + I + ++ G V + + G S + Sbjct: 55 QVLLNMTIQKVF----EKQYGSEVSDKEVEDAVAEEQKKYGDSYQTIL-------ARSGM 103 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + Q +V+ E E+ K + ++ ++K + Sbjct: 104 TAESRKAQIRTSKLVEYAVK---KAAESELTDENYKKAFEEYTPEVTAQIIKLDSEDKAK 160 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLK 251 K + K ++ + G+ + S P + Sbjct: 161 EVLAKAKESGADFAQLAKDNSTDEKTKE--------NGGEITFDSASTELPDVVKKAAFA 212 Query: 252 KSQNNTTNPYVTQK------GVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKH--EA 302 N ++ + + K + K L K Sbjct: 213 LDVNGISDVITAPGTQAYTSSFYIVKLTKKSEKSSNLDDYKEKLKTIILTQKQNDATFVQ 272 Query: 303 EYVKKLRSNAIIH 315 + K +A I Sbjct: 273 GVISKELQDANIK 285 >gi|257895172|ref|ZP_05674825.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium Com12] gi|257831737|gb|EEV58158.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium Com12] Length = 303 Score = 38.1 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 26/313 (8%), Positives = 89/313 (28%), Gaps = 44/313 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + F+ + + + + + G I++ ++ + ++ Sbjct: 1 MKKRFLALAIVLGTGLLSGCTNAGEKTAVSYKGGTISEQEVMDSLKKMQG-------ADS 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 AVQ+LI + + +K G + ++ + Q + G S + Q + + Sbjct: 54 AVQQLI---VYQVFEDKYGDDVSTKEIDSQYDQTKKQLGDSFDS-------QLKSAGYTE 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 Q + + ++ + + ++ ++ ++ Sbjct: 104 QKFKDSIKQSLAFQEGLKKHIKLTDEDLKTAW-----ESFHPEVEAQIIQVASEDDAKDV 158 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF--QNLLKK 252 + + ++ GK ++ + P + K Sbjct: 159 KKAA----------DKGDDFSKLAKDKSTDTTTKEDGGKVKFDSTTTTVPAEVKEAAFKL 208 Query: 253 SQNNTTNPYVTQKG------VEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK--HEAE 303 ++ + + + ++ G ++ K L T TK+ + + Sbjct: 209 KDGQVSDVITSTNASTYNTEYYVVKMVKNQNKGNDMDKYKKELKEIATDTKLSDSTFQNK 268 Query: 304 YVKKLRSNAIIHY 316 + ++ +A + Sbjct: 269 VIGEVLKDANVKI 281 >gi|260172707|ref|ZP_05759119.1| DSBA oxidoreductase [Bacteroides sp. D2] gi|315920999|ref|ZP_07917239.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313694874|gb|EFS31709.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 330 Score = 38.1 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 20/198 (10%), Positives = 58/198 (29%), Gaps = 5/198 (2%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIAL--LKLQKINGELEKIAVQELIVETLKK 87 I + + T +NGE I +++ + + E++ + LI + L + Sbjct: 14 IACNTPVINKNDVVTEVNGEQILLSELASQSKQEIFDILNTAYEIKSRVLAGLIKQKLLE 73 Query: 88 QEIEKSGITFD---SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144 ++ ++ + V + + +G K L + + Sbjct: 74 DAAKEENMSLEEFIDWFVQQKICVGQDSLKKRYGFNTQSFYVKGELIPLVKGSLEEKLSY 133 Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 +++ + + + K+ + E ++R + N F+ + Sbjct: 134 QQKLRSRIVQALVDSLYQKADIKRFLYPPKQPECVVRDLCVYYRGNLDSPVSFIVASDYN 193 Query: 205 AEESRLRLPKDCNKLEKF 222 E + + Sbjct: 194 CERCVQFEKTLSKLYDNY 211 >gi|57242050|ref|ZP_00369990.1| conserved hypothetical secreted protein, putative [Campylobacter upsaliensis RM3195] gi|57017242|gb|EAL54023.1| conserved hypothetical secreted protein, putative [Campylobacter upsaliensis RM3195] Length = 501 Score = 38.1 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 25/231 (10%), Positives = 61/231 (26%), Gaps = 18/231 (7%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------- 63 + + + + +V +Y + + E I+ + + R + Sbjct: 14 VTIWISVIAFVGAGVVGWGAYDYNQNRNSSVAIVGNEKISFVEFNLRYNQIYGYYNQISN 73 Query: 64 ----KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 + L+ IA+ LI + L + G+ + N V ++ Sbjct: 74 GALSEENAEKLGLKDIALNSLIEDKLLLNFAKNLGLWANENEVIQELSATEEFQNINGIF 133 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN-----DFMLKYGNLEMEIPANKQKMKNIT 174 + +N + ++ +F K L+M + + Sbjct: 134 DKNIYYAILKQNNILSKNYEQILSDRIILNKLNKIFEFPAKENELQMLAASYFMQDALEI 193 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + L + Q + K + L K F+ Sbjct: 194 AKITFDKKDLAVDENALKQLWEAHKNDFKTQKSYELSSYFIEAKKSNFSQD 244 >gi|69246901|ref|ZP_00604176.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium DO] gi|257879190|ref|ZP_05658843.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,230,933] gi|257881991|ref|ZP_05661644.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,231,502] gi|257883808|ref|ZP_05663461.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,231,501] gi|257890020|ref|ZP_05669673.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,231,410] gi|258615590|ref|ZP_05713360.1| rotamase family protein [Enterococcus faecium DO] gi|260560163|ref|ZP_05832340.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium C68] gi|293553404|ref|ZP_06674035.1| foldase protein PrsA [Enterococcus faecium E1039] gi|293559520|ref|ZP_06676057.1| foldase protein PrsA [Enterococcus faecium E1162] gi|293567397|ref|ZP_06678746.1| foldase protein PrsA [Enterococcus faecium E1071] gi|294617171|ref|ZP_06696826.1| foldase protein PrsA [Enterococcus faecium E1679] gi|294621809|ref|ZP_06700967.1| foldase protein PrsA [Enterococcus faecium U0317] gi|314939171|ref|ZP_07846427.1| putative foldase protein PrsA [Enterococcus faecium TX0133a04] gi|314941489|ref|ZP_07848377.1| putative foldase protein PrsA [Enterococcus faecium TX0133C] gi|314947443|ref|ZP_07850862.1| putative foldase protein PrsA [Enterococcus faecium TX0082] gi|314950587|ref|ZP_07853668.1| putative foldase protein PrsA [Enterococcus faecium TX0133A] gi|314992441|ref|ZP_07857864.1| putative foldase protein PrsA [Enterococcus faecium TX0133B] gi|314996693|ref|ZP_07861717.1| putative foldase protein PrsA [Enterococcus faecium TX0133a01] gi|68195030|gb|EAN09494.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium DO] gi|257813418|gb|EEV42176.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,230,933] gi|257817649|gb|EEV44977.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,231,502] gi|257819646|gb|EEV46794.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,231,501] gi|257826380|gb|EEV53006.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,231,410] gi|260073730|gb|EEW62055.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium C68] gi|291589914|gb|EFF21713.1| foldase protein PrsA [Enterococcus faecium E1071] gi|291596571|gb|EFF27809.1| foldase protein PrsA [Enterococcus faecium E1679] gi|291598592|gb|EFF29651.1| foldase protein PrsA [Enterococcus faecium U0317] gi|291602417|gb|EFF32638.1| foldase protein PrsA [Enterococcus faecium E1039] gi|291606582|gb|EFF35979.1| foldase protein PrsA [Enterococcus faecium E1162] gi|313589177|gb|EFR68022.1| putative foldase protein PrsA [Enterococcus faecium TX0133a01] gi|313593016|gb|EFR71861.1| putative foldase protein PrsA [Enterococcus faecium TX0133B] gi|313597212|gb|EFR76057.1| putative foldase protein PrsA [Enterococcus faecium TX0133A] gi|313599706|gb|EFR78549.1| putative foldase protein PrsA [Enterococcus faecium TX0133C] gi|313641518|gb|EFS06098.1| putative foldase protein PrsA [Enterococcus faecium TX0133a04] gi|313646101|gb|EFS10681.1| putative foldase protein PrsA [Enterococcus faecium TX0082] Length = 303 Score = 38.1 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 26/313 (8%), Positives = 89/313 (28%), Gaps = 44/313 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + F+ + + + + + G I++ ++ + ++ Sbjct: 1 MKKRFLALAIVLGTGLLSGCTNAGEKTAVSYKGGTISEQEVMDSLKKMQG-------ADS 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 AVQ+LI + + +K G + ++ + Q + G S + Q + + Sbjct: 54 AVQQLI---VYQVFEDKYGDDVSTKEIDSQYDQTKKQLGDSFDS-------QLKSAGYTE 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 Q + + ++ + + ++ ++ ++ Sbjct: 104 QTFKDSIKQSLAFQEGLKKHIKLTDEDLKTAW-----ESFHPEVEAQIIQVASEDDAKDV 158 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF--QNLLKK 252 + + ++ GK ++ + P + K Sbjct: 159 KKAA----------DKGDDFSKLAKDKSTDTTTKEDGGKVKFDSTTTTVPAEVKEAAFKL 208 Query: 253 SQNNTTNPYVTQKG------VEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK--HEAE 303 ++ + + + ++ G ++ K L T TK+ + + Sbjct: 209 KDGQVSDVITSTNASTYTTEYYVVKMVKNQNKGNDMDKYKKELKEIATDTKLSDSTFQNK 268 Query: 304 YVKKLRSNAIIHY 316 + ++ +A + Sbjct: 269 VIGEVLKDANVKI 281 >gi|87123260|ref|ZP_01079111.1| hypothetical protein RS9917_05355 [Synechococcus sp. RS9917] gi|86168980|gb|EAQ70236.1| hypothetical protein RS9917_05355 [Synechococcus sp. RS9917] Length = 221 Score = 38.1 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 7/110 (6%), Positives = 26/110 (23%), Gaps = 1/110 (0%) Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTT 258 + + + +F+ + G + + L Sbjct: 102 QAQELYLQIAHGEADFPELASRFSQGPEQSTNGVVGPVPLNQAHPSLADKLRAAQPGALL 161 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 P+ + + + + +S + +++ A + L Sbjct: 162 EPFRIDRWWVIARLERYAAASFDARMAEQMSVELLQEWLQQETAHRLSAL 211 >gi|196228020|ref|ZP_03126887.1| hypothetical protein CfE428DRAFT_0051 [Chthoniobacter flavus Ellin428] gi|196227423|gb|EDY21926.1| hypothetical protein CfE428DRAFT_0051 [Chthoniobacter flavus Ellin428] Length = 507 Score = 38.1 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 17/160 (10%), Positives = 38/160 (23%), Gaps = 11/160 (6%) Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214 + T++ + L + K K + L Sbjct: 348 NITPPRPLAYEEAKANLADTLKHERAQEALNLKATDVRNKIEEAIKGGKTFAAAAQELGV 407 Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274 F+ K + + + Q Q + + G + + Sbjct: 408 KAEDFPAFSPKEPKMD-------QPNAM-EVMQATGDLHQGQVSPVVPSSDGSLIVYVSK 459 Query: 275 KRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + + A K L+ + +++ KLR A Sbjct: 460 RLPIDEAKYKADKTQLADSLAEFQQTALFQQWL-KLRRAA 498 >gi|307709160|ref|ZP_07645619.1| foldase protein prsA precursor [Streptococcus mitis SK564] gi|307620106|gb|EFN99223.1| foldase protein prsA precursor [Streptococcus mitis SK564] Length = 312 Score = 37.7 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 80/313 (25%), Gaps = 41/313 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L + ++ K + I G+VIT+ +++ N + Sbjct: 3 KKLLAGAITLLSVATLAACSKGSEGADLISMK--GDVITEHQFYEQVKS------NPSAQ 54 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++ + I + +KQ + ++T+ Q+ N L+ Sbjct: 55 QVLLNLTIQKVFEKQYGSEVDEKEVNDTIAEEEKQYGENYQRVLSQAGMTLET------- 107 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 Q +V+ E E+ + K + ++ ++K + Sbjct: 108 ----RKAQIRTSKLVELAVK---KAAEAELTDDAYKKAFDEYTPDVTAQIIRLDNEDKAK 160 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLK 251 K + K + + G+ + S P+ + Sbjct: 161 EILEKAKASDADFAQLAKDNSTDEKTKA--------NGGEITFDSASTEVPEQVKKAAFA 212 Query: 252 KSQNNTTNPYVT------QKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK--HEA 302 N ++ + + K + I K L K Sbjct: 213 LDVNGVSDVITATGTQAYSSQYYIVKVTKKTEKSSNIDNYKEKLKTVILTQKQNDSTFVQ 272 Query: 303 EYVKKLRSNAIIH 315 + K A I Sbjct: 273 SIIGKELQAANIK 285 >gi|239930810|ref|ZP_04687763.1| lipoprotein [Streptomyces ghanaensis ATCC 14672] gi|291439175|ref|ZP_06578565.1| lipoprotein [Streptomyces ghanaensis ATCC 14672] gi|291342070|gb|EFE69026.1| lipoprotein [Streptomyces ghanaensis ATCC 14672] Length = 215 Score = 37.7 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 12/123 (9%), Positives = 38/123 (30%), Gaps = 15/123 (12%) Query: 43 RTTINGEVITDGDISKRI---------------ALLKLQKINGELEKIAVQELIVETLKK 87 + + IT + R+ + G L + + ++++ + + Sbjct: 34 AAVVGDQRITVSQLEDRVSEVRAAQRAAVPDEAQYAQAIARTGSLTRDTLHGMVLDRVLQ 93 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 +G+T + G + +++L + G+ + L +Q + Sbjct: 94 HAARDAGVTVTPREIQQMRSGLEEQAGGAEALEAAWLQQYGVPPQRLDENLRLQLEAQKL 153 Query: 148 VKN 150 + Sbjct: 154 AQR 156 >gi|332826777|gb|EGJ99594.1| hypothetical protein HMPREF9455_04090 [Dysgonomonas gadei ATCC BAA-286] Length = 702 Score = 37.7 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 21/190 (11%), Positives = 57/190 (30%), Gaps = 28/190 (14%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 K+ + + ++ + +F V+ M + ++G+VIT + S +IA Sbjct: 4 LQKIRSKSGLLVGIIAVGLLAFVFP-WGEVTTFVNKMRDK-AFVVDGKVITTKEYSDKIA 61 Query: 62 LLKLQKI------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV-- 107 + + N ++ ++A Q+++ E + +E + G+ +N Sbjct: 62 QWENFQKIMSNQSSLDEFTNSQIREMAYQQMVKEIMLDEEAGRLGLAVTPEELNDMVYGP 121 Query: 108 ------------QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155 + + FL ++ + + + Sbjct: 122 VVAPILYQIPFFANPQTGQFDKAYLMQFLSDINQDPTTMQEPHRSEIMARREIWAFIQNM 181 Query: 156 YGNLEMEIPA 165 +E Sbjct: 182 MKYQRLEEKY 191 >gi|254411711|ref|ZP_05025487.1| hypothetical protein MC7420_4677 [Microcoleus chthonoplastes PCC 7420] gi|196181433|gb|EDX76421.1| hypothetical protein MC7420_4677 [Microcoleus chthonoplastes PCC 7420] Length = 239 Score = 37.7 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 14/225 (6%), Positives = 55/225 (24%), Gaps = 2/225 (0%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + + +I + + A T + E + + + Sbjct: 1 MNQVKLSCQIPDLVEQIVTRKIITTAASEAGITMETEELQETANQFRFMNKLLSADETWT 60 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + +DF + + + + ++ Sbjct: 61 WLKKQSLSLDDFEEIVYYTAISGKLAAYLFADKVEPYFYEHQLDYASAVIYEVVLDDEDL 120 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT 258 ++ + +++ + G + D+ P+ + + Sbjct: 121 AMELFYAITTEEMSFYDVAQQYIQTVELRRKGGYRGMVQRQDMKPEISAAVFAATPPQML 180 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 P +T +GV I + + + + + + +++ + Sbjct: 181 KPIMTSQGVHLIFVEEMIQPELDDKTRLEIVSNLFSAWLKQKIEQ 225 >gi|256845592|ref|ZP_05551050.1| peptidylprolyl isomerase [Fusobacterium sp. 3_1_36A2] gi|294785119|ref|ZP_06750407.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. 3_1_27] gi|256719151|gb|EEU32706.1| peptidylprolyl isomerase [Fusobacterium sp. 3_1_36A2] gi|294486833|gb|EFG34195.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. 3_1_27] Length = 563 Score = 37.7 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 49/171 (28%), Gaps = 8/171 (4%) Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207 + + + ++ + K+ L I + + K + Sbjct: 298 LAEKVRDEVKPTDEDLLKFFNENKSKYSIPATADAKLVFISVKSAKEDDNLAKEKAEKLL 357 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVTQK 265 S L K + ++ + + + +F+ LK +N T+ Sbjct: 358 SELTPENFTEKGKSLSNNQDIIY-QDLGTFGTTAMVKEFEEALKDVPSNTVVNKVIKTKF 416 Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS-NAIIH 315 G + K++ ++ P EK E ++KL A I Sbjct: 417 GYHVAYV--KKNDNNRQWAVEHILIVPYP--SEKTMTEKLEKLNKVKADIE 463 >gi|283956103|ref|ZP_06373590.1| LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase D [Campylobacter jejuni subsp. jejuni 1336] gi|283792423|gb|EFC31205.1| LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase D [Campylobacter jejuni subsp. jejuni 1336] Length = 496 Score = 37.7 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 22/217 (10%), Positives = 59/217 (27%), Gaps = 15/217 (6%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------- 63 + + + + + +Y S T+ E I + R + Sbjct: 14 VTIWVSTIAFVGAGFLGWGAYDFNLNRSSSVATVGNEKIGFSEFDTRYRQILSYYNQISN 73 Query: 64 ----KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 ++ IA+ L+ + L + GI + N + + + Sbjct: 74 GALTPENAEQLGIKNIALSSLVEDKLLLNFAKDLGIGVNENEILQKLANTREFQDPTGDF 133 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179 + + +N + Q + + N+ + K + +++ L Sbjct: 134 NKTIYYELLNANNLTPKDYETQLANEVITDKL--NQIFNIPSKDEELKMLASSYFMQDAL 191 Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + N N+ ++K + +E Sbjct: 192 SIAKIDYDKKNIKINEEDLKKLWNEHKEDYKTKKIYE 228 >gi|297380175|gb|ADI35062.1| Hypothetical protein HPV225_1003 [Helicobacter pylori v225d] Length = 517 Score = 37.7 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 89/317 (28%), Gaps = 21/317 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 31 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 90 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK +EL + +K +EKS DS A + GL A Sbjct: 91 RRLKDAYAESIPN---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 145 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 146 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISALFPKTTTP 205 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 206 LEQSSLSLWAKLQDKLDILILSPNDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 265 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 266 ASLEKPDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 313 Query: 298 EK-HEAEYVKKLRSNAI 313 + Y+ ++NA Sbjct: 314 NEKALRSYIALKKANAQ 330 >gi|254237731|ref|ZP_04931054.1| hypothetical protein PACG_03819 [Pseudomonas aeruginosa C3719] gi|126169662|gb|EAZ55173.1| hypothetical protein PACG_03819 [Pseudomonas aeruginosa C3719] Length = 428 Score = 37.7 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 14/171 (8%), Positives = 48/171 (28%), Gaps = 14/171 (8%) Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + K + + E + + V + + + + + ++ + E R Sbjct: 265 RELAGKVSDKDAEAYYRRNLERYRNVAQVQAAHIRLADQASADKVYAELRGGLAFDEAVR 324 Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLE--SDLHPQFQNLLKKSQNNTTNPYVTQKGV 267 A G + L + L + + + P Sbjct: 325 R---------YSLADDRDRDPPGDLGLIRPQDGRLDLLRKTALIQKADTVSQPMRIDCAF 375 Query: 268 EYIAI---CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 E + + D++ + +++ ++ ++ ++ L + A + Sbjct: 376 EIVRVRSREDRQLPLDDRSVRFEVNQAVAREQLAAQFETRLRNLLAGARVE 426 >gi|309388964|gb|ADO76844.1| SurA domain protein [Halanaerobium praevalens DSM 2228] Length = 425 Score = 37.7 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 22/232 (9%), Positives = 56/232 (24%), Gaps = 16/232 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLII-FCIVPI-----VSYKSWAMSSRIRTTINGEVITDG 54 M + + + L+ FV+ F ++ + +NG I+ Sbjct: 1 MFDTLRNNSRIIVYLVVIAFVISGGFMGYGAYLNNRGGGQAPNQGPAVIAEVNGMEISQQ 60 Query: 55 DI-----SKRIALLKLQKINGELEKIAVQELIVETLKK--QEIEKSGITFDSNTVNYFFV 107 + + ++ LI L E + + V+ + Sbjct: 61 EYYSMLQQQAPNSSLSSSQIIPFRYQVLEALIERKLILAKAEEFDIQVEVSDSEVDENYN 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML---KYGNLEMEIP 164 ++ ++ + L +QG ++ + + K + EI Sbjct: 121 NILEQNEITDQELAETLAEQGSTIGELRENIKDSLQNTKTLTEAINQGVGKVEVSDQEIQ 180 Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216 + E S + E + + + Sbjct: 181 KLYNQRYLKVETESKKTETENSKQKESDSEPKLEEVSSDLKTEIKNKKRNEA 232 Score = 37.0 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 21/207 (10%), Positives = 53/207 (25%), Gaps = 8/207 (3%) Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 A G+ + Q N I V++ K + E + Q Sbjct: 50 AEVNGMEISQQEYYSMLQQQAPNSSLSSSQIIPFRYQVLEALIERKLILAKAE-EFDIQV 108 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + + + +L + + ++ E R + + I+ Sbjct: 109 EVSDSEVDENYNNILEQNEITDQELAETLAEQGSTIGELRENIKDSLQNTKTLTEAINQG 168 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 + + N + T+ + + + L Sbjct: 169 VGK---VEVSDQEIQKLYNQRYLKVETESKKTETENS----KQKESDSEPKLEEVSSDLK 221 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316 + K + ++K+L+++A I Sbjct: 222 TEIKNKKRNEAINNWLKELKTDAQIKI 248 >gi|188527796|ref|YP_001910483.1| conserved hypothetical secreted protein [Helicobacter pylori Shi470] gi|188144036|gb|ACD48453.1| conserved hypothetical secreted protein [Helicobacter pylori Shi470] Length = 517 Score = 37.7 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 90/317 (28%), Gaps = 21/317 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 31 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 90 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK +EL + +K +EKS DS A + GL A Sbjct: 91 RRLKDAYAESIPN---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 145 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 146 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISALFPKTTTP 205 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 206 LEQSSLSLWAKLQDKLDILILNPNDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 265 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K+ Sbjct: 266 ASLEKPDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKV 313 Query: 298 EK-HEAEYVKKLRSNAI 313 + Y+ ++NA Sbjct: 314 NEKALRSYIALKKANAQ 330 >gi|88607320|ref|YP_505198.1| ppiC/parvulin rotamase family protein [Anaplasma phagocytophilum HZ] gi|88598383|gb|ABD43853.1| ppiC/parvulin rotamase family protein [Anaplasma phagocytophilum HZ] Length = 601 Score = 37.7 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 15/166 (9%), Positives = 49/166 (29%), Gaps = 9/166 (5%) Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNIT------VREYLIRTVLFSIPDNKLQNQGFV 198 + + + E ++ + + + S ++ V Sbjct: 190 QKLFEEQYKNSLNFPEYRSADYIIMAEDDLLADVIVSDQEVDVEIKNSELHDQRDVLNLV 249 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNT 257 +AE + + + E + + + + + L +N++ ++ Sbjct: 250 FTDKNEAELAYKAYQEGKSFEELVSDAGYTIEDIALNNISKDVLPVGVRNVVFALNEGEV 309 Query: 258 TNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHE 301 + + + G + + K ++ E LK +S+ K + Sbjct: 310 SEMFRSVVGWHIMKVIRKHEITKEDLEKLKEKISSNIRRQKAGELL 355 >gi|261839760|gb|ACX99525.1| peptidyl-prolyl cis-trans isomerase D [Helicobacter pylori 52] Length = 487 Score = 37.7 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 89/317 (28%), Gaps = 21/317 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSGSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK +EL + +K +EKS DS A + GL A Sbjct: 61 RRLKDAYAESIPN---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIKKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISALFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPNDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EK-HEAEYVKKLRSNAI 313 + Y+ ++NA Sbjct: 284 NEKALRSYIALKKANAQ 300 >gi|89097668|ref|ZP_01170556.1| hypothetical protein B14911_14772 [Bacillus sp. NRRL B-14911] gi|89087527|gb|EAR66640.1| hypothetical protein B14911_14772 [Bacillus sp. NRRL B-14911] Length = 251 Score = 37.7 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 19/191 (9%), Positives = 54/191 (28%), Gaps = 11/191 (5%) Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKI-----------NGELEKIAVQELIVE 83 +N + I D + + ++ + ++++ + L+ + Sbjct: 56 QKVDEKETVAVVNDDKILGKDFNGMLQNAQMSYQMSGQDPTTKEASEQIKQQTIDSLVGQ 115 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 +L QE + G V + + + F++ L G+ + K ++ + Sbjct: 116 SLIMQEAAEKGYKASEEEVQGQLDEIKKQYEGDDKKFAAALKDAGLTEEELKGQISDSIV 175 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + + E Q + + + + N Q+ + Sbjct: 176 SNKYIDKEIKADAATEEEVKAYYDQVKASTPEGQSVPEYEEIKTKIQEQLNDQKKQEVLV 235 Query: 204 DAEESRLRLPK 214 E + K Sbjct: 236 KQVEDLKKDAK 246 >gi|227552245|ref|ZP_03982294.1| peptidylprolyl isomerase [Enterococcus faecium TX1330] gi|227178624|gb|EEI59596.1| peptidylprolyl isomerase [Enterococcus faecium TX1330] Length = 303 Score = 37.7 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 26/313 (8%), Positives = 89/313 (28%), Gaps = 44/313 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + F+ + + + + + G I++ ++ + ++ Sbjct: 1 MKKRFLALAIVLGTGLLSGCTNAGEKTAVSYKGGTISEQEVMDSLKKMQG-------ADS 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 AVQ+LI + + +K G + ++ + Q + G S + Q + + Sbjct: 54 AVQQLI---VYQVFEDKYGDDVSTKEIDSQYDQTKKQLGDSFDS-------QLKSAGYTE 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 Q + + ++ + + ++ ++ ++ Sbjct: 104 QTFKDSIKQSLAFQEGLKKHIKLTDEDLKTAW-----ESFHPEVEAQIIQVASEDDAKDV 158 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF--QNLLKK 252 + + ++ GK ++ + P + K Sbjct: 159 KKAA----------DKGDDFSKLAKDKSTDTTTKEDGGKVKFDSTTTTVPAEVKEAAFKL 208 Query: 253 SQNNTTNPYVTQKG------VEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK--HEAE 303 ++ + + + ++ G ++ K L T TK+ + + Sbjct: 209 KDGQVSDVITSTNASTYNTEYYVVKMVKNQNKGNDMDKYKKELKEIATDTKLSDSTFQNK 268 Query: 304 YVKKLRSNAIIHY 316 + ++ +A + Sbjct: 269 VIGEVLKDANVKI 281 >gi|222153359|ref|YP_002562536.1| foldase protein PrsA 1 [Streptococcus uberis 0140J] gi|222114172|emb|CAR42691.1| foldase protein PrsA 1 precursor [Streptococcus uberis 0140J] Length = 314 Score = 37.7 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 93/314 (29%), Gaps = 35/314 (11%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 ++ K++T + L + S S T+ G+ IT D Sbjct: 1 MNTSKKIVTGFVTLASVLTLAACSSTSDNTK---VVTMKGDTITVTDFYNEAK------- 50 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + ++ LI+ + ++E KS + FS L + G Sbjct: 51 TSTAAQQSMLSLILSRVFEKEYGKSVPEKKVEESYN------KTAKQYGSSFSDALAQAG 104 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 + + +K+ + + VK + + + + T Sbjct: 105 LTTDTYKKQIRTTMLVEYAVKQAAKKELTDDNYKKAFESYTPEMTTQVIAF--------- 155 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 ++ +K +++ + + A+K D + A +L SD+ + Sbjct: 156 ----DDEEKAKKVLEETKAEGADFANIAKENTTEANKKIDYTFDSADTVLPSDVIKETAK 211 Query: 249 LLKKSQNNTTNPYVT---QKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEK--HEA 302 L + ++ + QK + + K + + K+ L K + Sbjct: 212 LNEGEKSAVITVMDSRTYQKKYYVVHLVKKAEKKADWKEYKSRLKEIIMNEKENDSNFQN 271 Query: 303 EYVKKLRSNAIIHY 316 + + K A + Sbjct: 272 KVISKTLDKANVKI 285 >gi|217032656|ref|ZP_03438143.1| hypothetical protein HPB128_19g17 [Helicobacter pylori B128] gi|298736064|ref|YP_003728589.1| peptidyl-prolyl cis-trans isomerase D [Helicobacter pylori B8] gi|216945666|gb|EEC24294.1| hypothetical protein HPB128_19g17 [Helicobacter pylori B128] gi|298355253|emb|CBI66125.1| peptidyl-prolyl cis-trans isomerase D [Helicobacter pylori B8] Length = 487 Score = 37.7 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 29/317 (9%), Positives = 83/317 (26%), Gaps = 21/317 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK + + + + + DS A + GL A Sbjct: 61 RRLK-----DAYAESIPDFKELTKDQIKAMHLEKSALDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISALFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPSDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EK-HEAEYVKKLRSNAI 313 + Y+ ++NA Sbjct: 284 NEKALRSYIALKKANAQ 300 >gi|261838345|gb|ACX98111.1| pedidyl-prolyl cis-trans isomerase D [Helicobacter pylori 51] Length = 487 Score = 37.7 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 90/317 (28%), Gaps = 21/317 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK +EL + +K +EKS DS A + GL A Sbjct: 61 RRLKDAYAESIPN---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIKKTSVFQKDGIFDEELYKNILKQSHYRPKHFEESVERLLILQKISALFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPNDVKISLNKEEMKKYYESHKKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EK-HEAEYVKKLRSNAI 313 + Y+ ++NA Sbjct: 284 NEKALRSYIALKKANAQ 300 >gi|153003349|ref|YP_001377674.1| DSBA oxidoreductase [Anaeromyxobacter sp. Fw109-5] gi|152026922|gb|ABS24690.1| DSBA oxidoreductase [Anaeromyxobacter sp. Fw109-5] Length = 354 Score = 37.7 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 18/40 (45%) Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + L +K ++ K + AEY ++L+ +A + Sbjct: 133 QQLPPYEQVKPDIARFVKNQKAQGLLAEYYEELKKDAKVE 172 >gi|302671608|ref|YP_003831568.1| peptidyl-prolyl cis-trans isomerase PpiC-type [Butyrivibrio proteoclasticus B316] gi|302396081|gb|ADL34986.1| peptidyl-prolyl cis-trans isomerase PpiC-type [Butyrivibrio proteoclasticus B316] Length = 356 Score = 37.7 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 30/327 (9%), Positives = 88/327 (26%), Gaps = 32/327 (9%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN--GEVITDGD-----ISKRIAL 62 + IK ++ + +I V + + S + ++ T + I + I + +A Sbjct: 6 TIHIKRISMILIGMILV-VSLTACGSLDGTRKVVFTTGFSDDEIFRIEDSVCSIQEIMAY 64 Query: 63 L----------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 L + Q +G + + + ++ + + + + + Sbjct: 65 LINTQNGYEGTFGREIWETQTDDGTVAQQLKESILAKVAQIKAMNLLAGEMGIVLDDNEL 124 Query: 107 VQHARNTGLSAEDFSSFL-DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 E + + + + D + + + + A Sbjct: 125 SMAREAAATYYESLTPEEIEAMKGITQEDVFRIYSEYALADKLYDYIIRDINPEISDDEA 184 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 ++ I ++ Y + +P N K + + E ++ Sbjct: 185 RTITVEQIFLKTYDLNASGEKVPFNDTAKNTVYLKAKSIRNQFLDGASFEELMSEYNEAE 244 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284 +S G + ++ ++ + + ++ G I + Sbjct: 245 ESTISFG------KGEMEEAYETVAFNLGTDEVSDVVEVNDGYVIIKCVTTFNREETEYN 298 Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSN 311 K + A+ + YV L Sbjct: 299 KVRIVAERKREVFGEQYDAYVDTLTKE 325 >gi|167747442|ref|ZP_02419569.1| hypothetical protein ANACAC_02162 [Anaerostipes caccae DSM 14662] gi|317471171|ref|ZP_07930542.1| ppic-type ppiase domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|167652804|gb|EDR96933.1| hypothetical protein ANACAC_02162 [Anaerostipes caccae DSM 14662] gi|316901386|gb|EFV23329.1| ppic-type ppiase domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 370 Score = 37.7 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 20/241 (8%), Positives = 63/241 (26%), Gaps = 5/241 (2%) Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123 K + ++ + ++ + + + S+ T Sbjct: 81 KKITMQDSIKDNVINQIKTVKVLADHADDYKVKLTSDEKKQLDESVKSFTKNELGKRVMK 140 Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + D + + + +++ V N + K + A K+ + + Sbjct: 141 VTG---ADKDYIKEIQQENLIAQKVMNAIIEKADVKVTDDEAKTVKVYKLVFTTKKTDSK 197 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243 + + + K+ K+A ++ + +K+ + + Sbjct: 198 TGKEVNMTAKEKAAQLKKAKEALKAIKKGQSVKAVAKKYKVDTDNEESYTKGKAVLGT-- 255 Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 K +N + T I + + K+ L + +K + Sbjct: 256 KFEDAASKLKKNQVSGVVETDDAYVIIKMLNPNVKSELATSKSTLLQEKQQEAYQKVYKK 315 Query: 304 Y 304 + Sbjct: 316 W 316 >gi|15900858|ref|NP_345462.1| foldase protein PrsA [Streptococcus pneumoniae TIGR4] gi|111657958|ref|ZP_01408665.1| hypothetical protein SpneT_02000847 [Streptococcus pneumoniae TIGR4] gi|149010372|ref|ZP_01831743.1| peptidylprolyl isomerase [Streptococcus pneumoniae SP19-BS75] gi|182683926|ref|YP_001835673.1| peptidylprolyl isomerase [Streptococcus pneumoniae CGSP14] gi|225858774|ref|YP_002740284.1| foldase protein PrsA [Streptococcus pneumoniae 70585] gi|303254448|ref|ZP_07340554.1| foldase protein PrsA [Streptococcus pneumoniae BS455] gi|303259894|ref|ZP_07345869.1| peptidylprolyl isomerase [Streptococcus pneumoniae SP-BS293] gi|303262308|ref|ZP_07348252.1| peptidylprolyl isomerase [Streptococcus pneumoniae SP14-BS292] gi|303264730|ref|ZP_07350648.1| peptidylprolyl isomerase [Streptococcus pneumoniae BS397] gi|303269142|ref|ZP_07354921.1| peptidylprolyl isomerase [Streptococcus pneumoniae BS458] gi|46397004|sp|Q97R51|PRSA_STRPN RecName: Full=Foldase protein prsA; Flags: Precursor gi|226712008|sp|B2IPD4|PRSA_STRPS RecName: Full=Foldase protein prsA; Flags: Precursor gi|254783413|sp|C1C6V8|PRSA_STRP7 RecName: Full=Foldase protein prsA; Flags: Precursor gi|14972456|gb|AAK75102.1| putative protease maturation protein [Streptococcus pneumoniae TIGR4] gi|147764853|gb|EDK71782.1| peptidylprolyl isomerase [Streptococcus pneumoniae SP19-BS75] gi|182629260|gb|ACB90208.1| peptidylprolyl isomerase [Streptococcus pneumoniae CGSP14] gi|225721397|gb|ACO17251.1| foldase protein PrsA [Streptococcus pneumoniae 70585] gi|302598615|gb|EFL65655.1| foldase protein PrsA [Streptococcus pneumoniae BS455] gi|302636631|gb|EFL67122.1| peptidylprolyl isomerase [Streptococcus pneumoniae SP14-BS292] gi|302639099|gb|EFL69559.1| peptidylprolyl isomerase [Streptococcus pneumoniae SP-BS293] gi|302641329|gb|EFL71697.1| peptidylprolyl isomerase [Streptococcus pneumoniae BS458] gi|302645817|gb|EFL76046.1| peptidylprolyl isomerase [Streptococcus pneumoniae BS397] Length = 313 Score = 37.7 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 79/313 (25%), Gaps = 41/313 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L + ++ K + I G+VIT+ +++ N + Sbjct: 3 KKLLAGAITLLSVATLAACSKGSEGADLISMK--GDVITEHQFYEQVKS------NPSAQ 54 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++ + I + +KQ + +T+ Q+ N L+ Sbjct: 55 QVLLNMTIQKVFEKQYGSELDDKEVDDTIAEEKKQYGENYQRVLSQAGMTLET------- 107 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 Q +V+ E E+ K + ++ ++K + Sbjct: 108 ----RKAQIRTSKLVELAVK---KVAEAELTDEAYKKAFDEYTPDVTAQIIRLNNEDKAK 160 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLK 251 K + K ++ + G+ + S P+ + Sbjct: 161 EVLEKAKAEGADFAQLAKDNSTDEKTKE--------NGGEITFDSASTEVPEQVKKAAFA 212 Query: 252 KSQNNTTNPYVT------QKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK--HEA 302 + ++ + + K + I K L K Sbjct: 213 LDVDGVSDVITATGTQAYSSQYYIVKLTKKTEKSSNIDDYKEKLKTVILTQKQNDSTFVQ 272 Query: 303 EYVKKLRSNAIIH 315 + K A I Sbjct: 273 SIIGKELQAANIK 285 >gi|270292892|ref|ZP_06199103.1| foldase protein PrsA [Streptococcus sp. M143] gi|270278871|gb|EFA24717.1| foldase protein PrsA [Streptococcus sp. M143] Length = 313 Score = 37.7 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 83/313 (26%), Gaps = 41/313 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L + ++ KS + I G+V+T+ +++ N + Sbjct: 3 KKLLAGAITLLSVATLAACSKSSEGADLISMK--GDVVTEHQFYEQVK------NNPTAQ 54 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++ + I + +KQ + + V ++ + + + Sbjct: 55 QVLLNMTIQKVFEKQYGSEVTDKEVDDAVAEEQKKYGDSYNSVLQRAGMTPET------- 107 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 Q +V+ E E+ + + ++ ++K + Sbjct: 108 ----RKAQIRTSKLVELAVK---KAAENELTDEAYQKAFEAYTPDVTAQIIRMDNEDKAK 160 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES-DLHPQFQNLLKK 252 K + + +K ++ + G+ + S +L Q + Sbjct: 161 EVLEKAKAEGADFAQLAKDNSNDDKTKE--------NGGEITFDSASTELPEQVKKAAFA 212 Query: 253 SQNNTTNPYVTQKG-------VEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEK--HEA 302 N + +T G I + K + K L K Sbjct: 213 LDVNGISDVITATGTQAYSTQYYIIKLTKKTEKSSNLDDYKEKLKTVILTQKQNDSSFVQ 272 Query: 303 EYVKKLRSNAIIH 315 + K A I Sbjct: 273 SVIGKEFQAANIK 285 >gi|108762810|ref|YP_633122.1| putative lipoprotein [Myxococcus xanthus DK 1622] gi|108466690|gb|ABF91875.1| putative lipoprotein [Myxococcus xanthus DK 1622] Length = 361 Score = 37.7 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 5/39 (12%), Positives = 14/39 (35%) Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315 + +K + T ++ ++LR +A + Sbjct: 137 EGSTYEQMKPQIVEFLTQQPKQERAQALFEELRKSANVK 175 >gi|94265725|ref|ZP_01289462.1| hypothetical protein MldDRAFT_4726 [delta proteobacterium MLMS-1] gi|93453738|gb|EAT04114.1| hypothetical protein MldDRAFT_4726 [delta proteobacterium MLMS-1] Length = 229 Score = 37.7 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 33/100 (33%), Gaps = 7/100 (7%) Query: 13 IKLLTTYFVLIIFCIVP-------IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 +K L T +++ F I + A + G IT D+ + +A + Sbjct: 1 MKSLATILLVLFFTAACGQQEQEKIGAEAGPASDEGYIVQVGGNYITPADVEQELAGMPE 60 Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 + Q LI E +K++ + + + Sbjct: 61 NRRTNYEMPGGKQRLIDEMIKREMFRQEAQRAGLDQSEEY 100 >gi|326789753|ref|YP_004307574.1| 3D domain-containing protein [Clostridium lentocellum DSM 5427] gi|326540517|gb|ADZ82376.1| 3D domain-containing protein [Clostridium lentocellum DSM 5427] Length = 340 Score = 37.7 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 37/97 (38%), Gaps = 6/97 (6%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD-----ISKRIALLKLQKINGE 71 +++ ++ VS ++ S+I T ++ +T + + + + LK+ + + Sbjct: 6 RIALLIVALFMLCAVSITAYQSMSKIITLVDDGKVTQYETDASSVKELLTQLKVTLGDKD 65 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 + A++ I + +K E+ T Sbjct: 66 TVQPALETEIEDNMKITI-ERWKPTVSYTENGETVEF 101 >gi|268316633|ref|YP_003290352.1| hypothetical protein Rmar_1072 [Rhodothermus marinus DSM 4252] gi|262334167|gb|ACY47964.1| hypothetical protein Rmar_1072 [Rhodothermus marinus DSM 4252] Length = 590 Score = 37.7 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 13/170 (7%), Positives = 35/170 (20%), Gaps = 12/170 (7%) Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 + + E + ++ L R I + ++ +I+ Sbjct: 408 QQHIESRLPKPTEEALRAFYQAHAESLFYQLPRVYTEIIVRPTREAIDSIRAKIQRGV-- 465 Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK--- 265 L + + ++ + P Q Sbjct: 466 PFEKASHRRLLRAYERT---REGKIITWNKRTEPPYFGELAFSLKVGEIAGPIEYQDVRE 522 Query: 266 --GVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 I + + + + + E+ E +LR Sbjct: 523 GRRYALIRVTKRLEEKQLTFEEARDRVEKAFLEHHRERLAREEAARLRER 572 >gi|15645592|ref|NP_207768.1| hypothetical protein HP0977 [Helicobacter pylori 26695] gi|2314119|gb|AAD08023.1| conserved hypothetical secreted protein [Helicobacter pylori 26695] Length = 487 Score = 37.7 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 29/317 (9%), Positives = 83/317 (26%), Gaps = 21/317 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK + + + + + DS A + GL A Sbjct: 61 RRLK-----DAYAESIPDFKELTKDQIKAMHLEKSALDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISTLFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPSDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EK-HEAEYVKKLRSNAI 313 + Y+ ++NA Sbjct: 284 NEKALRSYIALKKANAQ 300 >gi|332673819|gb|AEE70636.1| peptidyl-prolyl cis-trans isomerase [Helicobacter pylori 83] Length = 487 Score = 37.7 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 89/317 (28%), Gaps = 21/317 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK +EL + +K +EKS DS A + GL A Sbjct: 61 RRLKDAYAESIPN---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISTLFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPNDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPNLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EK-HEAEYVKKLRSNAI 313 + Y+ ++NA Sbjct: 284 NEKALRSYIALKKANAQ 300 >gi|308063803|gb|ADO05690.1| conserved hypothetical secreted protein [Helicobacter pylori Sat464] Length = 487 Score = 37.7 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 89/317 (28%), Gaps = 21/317 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK +EL + +K +EKS DS A + GL A Sbjct: 61 RRLKDAYAESIPN---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISALFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPNDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPNLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EK-HEAEYVKKLRSNAI 313 + Y+ ++NA Sbjct: 284 NEKALRSYIALKKANAQ 300 >gi|308062290|gb|ADO04178.1| conserved hypothetical secreted protein [Helicobacter pylori Cuz20] Length = 487 Score = 37.7 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 89/317 (28%), Gaps = 21/317 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK +EL + +K +EKS DS A + GL A Sbjct: 61 RRLKDAYAESIPN---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISALFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPNDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPNLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EK-HEAEYVKKLRSNAI 313 + Y+ ++NA Sbjct: 284 NEKALRSYIALKKANAQ 300 >gi|172037585|ref|YP_001804086.1| hypothetical protein cce_2672 [Cyanothece sp. ATCC 51142] gi|171699039|gb|ACB52020.1| conserved hypothetical protein [Cyanothece sp. ATCC 51142] Length = 236 Score = 37.7 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 26/242 (10%), Positives = 66/242 (27%), Gaps = 21/242 (8%) Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 ++ I LK E+ + I+ ++ Q + + Sbjct: 2 EVDTIINFLKTTLKFKEIYCQIQYQRIINQAAEKMNLTVTAE---EIQIEADSQRTQRSL 58 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 A D ++LD+Q I + ++ + + + + F + + + +++ Sbjct: 59 EKAADTYAWLDEQMINSDDWEAGIYNSILRQKLAEALFSQEVEKYFAQNKVDFEQVLLYQ 118 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 + + + + F Q + + R G Sbjct: 119 IIVPYEKLAWEIFYQIEEEEMSFYQAAHIYDIDEQRR-----------------YHCGHE 161 Query: 235 QYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293 L +L P F N+ P T +G + + + + L + + Sbjct: 162 GKLYRFNLKPDFSANIFAAQPKKVITPLKTDQGYHILMVEEFIEAELTPILYEEIMDRMF 221 Query: 294 PT 295 Sbjct: 222 QE 223 >gi|15676261|ref|NP_273395.1| hypothetical protein NMB0346 [Neisseria meningitidis MC58] gi|7225567|gb|AAF40789.1| hypothetical protein NMB0346 [Neisseria meningitidis MC58] gi|316984351|gb|EFV63325.1| conserved hypothetical protein [Neisseria meningitidis H44/76] gi|325134927|gb|EGC57559.1| hypothetical protein NMBM13399_0344 [Neisseria meningitidis M13399] gi|325140995|gb|EGC63501.1| hypothetical protein NMBCU385_0306 [Neisseria meningitidis CU385] gi|325145141|gb|EGC67423.1| hypothetical protein NMBM01240013_0367 [Neisseria meningitidis M01-240013] gi|325199540|gb|ADY94995.1| conserved hypothetical protein [Neisseria meningitidis H44/76] Length = 252 Score = 37.7 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 12/166 (7%), Positives = 46/166 (27%), Gaps = 9/166 (5%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V + + E ++ + ++ E Q ++ + A+ Sbjct: 86 VQNRFKIAEASFYAEEYVRFLERSETVSEDELHKFYEQQIRMIKLQQVSFATEEEARQAQ 145 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTT-NPYVTQ 264 + L+ ++++ + +++ L + ++ + T +P Sbjct: 146 QLLLKGLSFEGLMKRYPNDEQAFD----GFIMAQQLPEPLASQFAAMNRGDVTRDPVKLG 201 Query: 265 KGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + + D ++ L K +++ Sbjct: 202 ERYYLFKLSEVGKNPDAQPFELVRNQLEQGLRQEKARLKIDALLEE 247 >gi|159029162|emb|CAO87522.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 246 Score = 37.7 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 21/216 (9%), Positives = 47/216 (21%), Gaps = 1/216 (0%) Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140 + E+ + K G+ A T E +++ + + Sbjct: 5 VSESEVLPLLAKYGMLPQLIREVIIEQAIANITCNPEERNAAYSRFYQNNQIANDEQMKS 64 Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 + ++ N +L L + Sbjct: 65 WLQQNGMDCEQLEYLILRDIKLEKFKQETWDNKVESYFLQVKSQLDKVVYSLIRTKNIGI 124 Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN 259 + + R +K++ + G + S HPQ Q L Sbjct: 125 AQELFFRIQDRENSFAELAKKYSQGSEAETGGLLGPVELSTPHPQIGQILKASKPGQLWP 184 Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295 P + V + + + + L Sbjct: 185 PTQVGEWVVIVRLEKYLSCELDPPTRQRLRNDLFQQ 220 >gi|319639215|ref|ZP_07993966.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Neisseria mucosa C102] gi|317399399|gb|EFV80069.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Neisseria mucosa C102] Length = 254 Score = 37.7 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 17/165 (10%), Positives = 44/165 (26%), Gaps = 6/165 (3%) Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIR-TVLFSIPDNKLQNQGFVQKRIKDAEE 207 + ++ N+E E AN+ + F ++ V D Sbjct: 85 DAEVQNQFKNVEAEFYANQYAVYLERQTAVDDAELRRFYDQQTRIIKLQQVSFASADEVR 144 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTT-NPYVTQK 265 + L E+ + + ++ L PQ ++ + T P + Sbjct: 145 AAQELLLKGLSFEELMKRYPNPEQKFDGFISPQQLPPQLAVAFADMTRGDVTHEPIQMEN 204 Query: 266 GVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + ++ ++ K+ +K+ Sbjct: 205 RFYLFKLSAVEHDPNAEPFELVRNQIAQAVKQQKVNNQIERILKE 249 >gi|225870097|ref|YP_002746044.1| foldase protein PrsA precursor [Streptococcus equi subsp. equi 4047] gi|254783412|sp|C0M9L5|PRSA_STRE4 RecName: Full=Foldase protein prsA; Flags: Precursor gi|225699501|emb|CAW93050.1| foldase protein PrsA precursor [Streptococcus equi subsp. equi 4047] Length = 333 Score = 37.7 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 87/310 (28%), Gaps = 34/310 (10%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K ++ ++ + T+ G+ I+ D N E+ Sbjct: 3 KSTKLLAGIVTLASAMTLAACQSTNDNTSVITMKGDTISVSDFYNETK-------NTEIS 55 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A+ L+V + + + K + + A G FS+ L + G+ + Sbjct: 56 QRAMLNLVVSRVFEDQYGKK---VSKKRTEEAYNKSAEQYG---ASFSAALAQSGLTTDT 109 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV----REYLIRTVLFSIPD 189 +K+ + + VK + + + + + T + Sbjct: 110 YKRQIRSAMLVEYAVKEAAKKELTDADYKKAYESYTPEMTTQVTTLDNEETAKAVLGEVK 169 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + + K A + ++ D + A I S L E D+ Sbjct: 170 AEGADFAAIAKEKTTAADKKVDYKFDSGDTKLPADVIKAASG-----LKEGDISEVVS-- 222 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIE--KHEAEYVK 306 +P Q + + K + + K L K + + + + Sbjct: 223 -------VLDPATYQNKFYIVKVTKKAEKASDWKKYKKRLKEIVLAEKTQNIDFQNKVIA 275 Query: 307 KLRSNAIIHY 316 K A + Sbjct: 276 KALDKANVKI 285 >gi|311029962|ref|ZP_07708052.1| hypothetical protein Bm3-1_05291 [Bacillus sp. m3-13] Length = 252 Score = 37.7 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 18/181 (9%), Positives = 55/181 (30%), Gaps = 8/181 (4%) Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETLKKQEIEK 92 ++ +NG+ I + ++ + ++ + ++ + LI + + QE+E Sbjct: 55 EKVVAKVNGQEIKGQEYNEMLQQTQMMMMQFGQGGDAKAMKDQTLNALIDQKVLSQEVES 114 Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152 G + + S E F L++ + K ++ + ++ +F Sbjct: 115 KGYKTSEKEIEDYIKDIKA-NYESEEKFEEALEESPLTMETLKAQISEELALQKYMEKEF 173 Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212 E Q + ++ + + + + E+ + Sbjct: 174 PETKVTDEQIKEYYNQAKEQNEAQQAEAPEGEEAPANEFPELAEVEDQIRGQLEQEETQK 233 Query: 213 P 213 Sbjct: 234 K 234 >gi|293571240|ref|ZP_06682274.1| foldase protein PrsA [Enterococcus faecium E980] gi|291608647|gb|EFF37935.1| foldase protein PrsA [Enterococcus faecium E980] Length = 303 Score = 37.7 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 26/313 (8%), Positives = 89/313 (28%), Gaps = 44/313 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + F+ + + + + + G I++ ++ + ++ Sbjct: 1 MKKRFLALAIVLGTGLLSGCTNAGEKTAVSYKGGTISEQEVMDSLKKMQG-------ADS 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 AVQ+LI + + +K G + ++ + Q + G S + Q + + Sbjct: 54 AVQQLI---VYQVFEDKYGDDVSTKEIDSQYDQTKKQLGDSFDS-------QLKSAGYTE 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 Q + + ++ + + ++ ++ ++ Sbjct: 104 QTFKDSIKQSLAFQEGLKKHIKLTDEDLKTAW-----ESFHPEVEAQIIQVASEDDAKDV 158 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF--QNLLKK 252 + + ++ GK ++ + P + K Sbjct: 159 KKAA----------DKGDDFSKLAKDKSTDTTTKEDGGKVKFDSTTTTVPAEVKEAAFKL 208 Query: 253 SQNNTTNPYVTQKG------VEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK--HEAE 303 ++ + + + ++ G ++ K L T TK+ + + Sbjct: 209 KDGQVSDVITSTNASTYTTEYYVVKMMKNQNKGNDMDKYKKELKEIATDTKLSDSTFQNK 268 Query: 304 YVKKLRSNAIIHY 316 + ++ +A + Sbjct: 269 VIGEVLKDANVKI 281 >gi|78777490|ref|YP_393805.1| hypothetical protein Suden_1292 [Sulfurimonas denitrificans DSM 1251] gi|78498030|gb|ABB44570.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM 1251] Length = 487 Score = 37.7 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 25/243 (10%), Positives = 67/243 (27%), Gaps = 21/243 (8%) Query: 5 VFTSLSDFIK--LLTTYFVLIIFCIVPIVSYKSWAMSSRI--RTTINGEVITDGDISKRI 60 + T + K ++T + I F V + ++ + + IT G++ K Sbjct: 1 MITWMQRHKKYLIITIWISTIAFVGAGFVGWGQYSYGDKAGAVAKVGSVEITMGELQKSY 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF- 106 + + Q L+ A+ L + L + + + Sbjct: 61 SNIYAQYSQMFKGEFDEEKAKSFGLQSQALNFLTQQALVLNLAKSYNLEVSDEELLKEIT 120 Query: 107 --VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-NDFMLKYGNLEMEI 163 ++ + + L K I ++ + + + + K ++ Sbjct: 121 SKDYFFKDGVFDKDVYKDVLSKNNIKTKEYEADIKKELLIRKTLSLLKIQTKESEQKIID 180 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 A K + +L + ++ +Q ++ K K ++ Sbjct: 181 TAFSIADKIDYKVLNANQIILDTSNESLKSFWEKIQNNFMSEVSYDIKYIKHDKKSNEYN 240 Query: 224 SKI 226 Sbjct: 241 DAA 243 >gi|295099529|emb|CBK88618.1| PPIC-type PPIASE domain. [Eubacterium cylindroides T2-87] Length = 339 Score = 37.7 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 22/228 (9%), Positives = 61/228 (26%), Gaps = 22/228 (9%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSR------IRTTINGEVITDGDISKRIALLKLQKIN 69 + +LI F I + +S + + +I+G +T D+ + + Sbjct: 12 VVIAVILISFIGYFIFDANRYNVSGKTMDGKEVVASIDGTDVTADDLYNELESFDSTLLY 71 Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129 + + I T +E D++T+ +A++ E + Sbjct: 72 NMYRNAVINQTIETTDSLRE--------DASTLESTIRTNAQSNSTDYEASLAAELASYG 123 Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + K N + + + +++ Sbjct: 124 YKSIDDLDD--------YCLTSVKEKEMNKAYVDEHFDEYKEAVESVSPRTVSIISMSVT 175 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 + + QK+ + +++ + + G Y+ Sbjct: 176 DADELTDDEQKKKDNIDQALEDGSFADAATAFSEDETTAANDGFYGYI 223 >gi|109899789|ref|YP_663044.1| twin-arginine translocation pathway signal [Pseudoalteromonas atlantica T6c] gi|109702070|gb|ABG41990.1| Twin-arginine translocation pathway signal [Pseudoalteromonas atlantica T6c] Length = 453 Score = 37.7 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 19/249 (7%), Positives = 62/249 (24%), Gaps = 23/249 (9%) Query: 11 DFIKLLTTYFV-LIIFCIVPIVSYKSWAMSSRIRTTING------------EVITDGDIS 57 + +K+ F+ + + +S +++ ++ + I+ + Sbjct: 2 NLMKITKRAFIKASAAAVASLPLSQSVFAANKPVASVEDNVATLSDITASSQPISLSERK 61 Query: 58 KRIALLKLQKINGELEKIAVQELIVETL----KKQEIEKSGITFDSNTVNYFFVQHARNT 113 RI + + + ++ + E+ + + Sbjct: 62 TRIQKAQSLMAKANIAAMILEPGAAMDYFTGIQWWRSERLTAVVIPREGDIAVLCPFFEE 121 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN---DFMLKYGNLEMEIPANKQKM 170 E D + ++ L Q + V F ++ + Sbjct: 122 PSIRESLKVGDDVRVWQEHESPFALVKQILTDRGVDKGQLAFEHSVRYFVLDGVMSLMGN 181 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQK---RIKDAEESRLRLPKDCNKLEKFASKIH 227 T + + + +++ + R + L L + + S+ Sbjct: 182 MRHTSADPITQGCRMFKSAHEIALMHKANEITLRAYQHVYANLALGMSQQDVNQLMSRAQ 241 Query: 228 DVSIGKAQY 236 G + Sbjct: 242 AQLGGSGIW 250 >gi|161870723|ref|YP_001599896.1| hypothetical protein NMCC_1796 [Neisseria meningitidis 053442] gi|161596276|gb|ABX73936.1| conserved hypothetical protein [Neisseria meningitidis 053442] Length = 289 Score = 37.3 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 11/166 (6%), Positives = 45/166 (27%), Gaps = 9/166 (5%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V + + E ++ + ++ Q ++ + A+ Sbjct: 123 VQNRFKIAEASFYAEEYVRFLERSETVSESALRQFYERQIRMIKLQQVSFATEEEARQAQ 182 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTT-NPYVTQ 264 + L+ ++++ + +++ L + ++ + T +P Sbjct: 183 QLLLKGLSFEGLMKRYPNDEQAFD----GFIMAQQLPEPLASQFAAMNRGDVTRDPVKLG 238 Query: 265 KGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + + D ++ L K +++ Sbjct: 239 ERYYLFKLSEVGKNPDAQPFELVRNQLEQGLRQEKARLKIDAILEE 284 >gi|118790480|ref|XP_318616.2| AGAP009594-PA [Anopheles gambiae str. PEST] gi|223635325|sp|Q7PK92|LRC50_ANOGA RecName: Full=Leucine-rich repeat-containing protein 50 homolog gi|116117965|gb|EAA43462.2| AGAP009594-PA [Anopheles gambiae str. PEST] Length = 910 Score = 37.3 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 27/280 (9%), Positives = 74/280 (26%), Gaps = 27/280 (9%) Query: 56 ISKRIALLKLQKINGELEKIAVQELIV---ETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 I + ++ ++ L+ E E + I + N + ++ R Sbjct: 470 IEQARQERFEANERSLAKEAVLERLMKGHAEVDMNIEQQMISIGGKQHNFNEYRLEVFRQ 529 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 ++ + Q N + Q K ++ I ++ Sbjct: 530 DQEKLQNLIDRVTAQKEKYNAHIDSIHDQLANIMEDYGQISEKLRKVDDMIQNIGDEVVV 589 Query: 173 ITVREYLIRTVLFSIPDNKLQNQG----FVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 +E V+ + + Q ++ + E + + +++ +S Sbjct: 590 HQEKERDGLEVIQELEPITIAEQIVENMTKEQVPDEVEANDKASDATIDPVDQLSSDESA 649 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG------------VEYIAICDKR 276 + L + T+ P + G E + + + Sbjct: 650 I---DLGELNQHVDAQVEVGPSDPKDATTSKPIPEEFGSDPVYRKFIDIQYEIDKLTEDQ 706 Query: 277 DLGGEIALKAYLSAQNTPTKI-----EKHEAEYVKKLRSN 311 L + TK+ +++ + ++ R N Sbjct: 707 IFTALSEAARELQEEELETKLVHDAIDEYWSTDLEDFRRN 746 >gi|294614167|ref|ZP_06694087.1| foldase protein PrsA [Enterococcus faecium E1636] gi|291592943|gb|EFF24532.1| foldase protein PrsA [Enterococcus faecium E1636] Length = 324 Score = 37.3 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 29/312 (9%), Positives = 82/312 (26%), Gaps = 44/312 (14%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 + + + + +++ T+ G IT D L + Sbjct: 4 KSIILAATSALAVLTLAACSGDTNKDIATMKGGTITVSDFYDEAKL-------ESSNQSL 56 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 VQ +I+ + K G V+ + + A++ G + E Q + K Sbjct: 57 VQRMIIYKV---FNNKYGDKVTDKQVDAEYDKQAKSLGDTFES-------QLEAAGYTKD 106 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + ++ + + ++ +++ ++ Sbjct: 107 TYKEYIRNNLAFEAGLKAHVDITDDDLKTAW-----KSFHPEVEAQIIKLSSEDEAKDVK 161 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF--QNLLKKS 253 + ++ GK ++ + P + K Sbjct: 162 KSA----------DDGDDFSKLAKDKSTDTETKEDGGKVKFDSTTTTIPAEVKEAAFKLK 211 Query: 254 QNNTTNPYVTQK------GVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKI--EKHEAEY 304 ++ T + + ++ G ++ K L T TK+ + Sbjct: 212 DGEISDVITTTNPTSYATEYYVVKMVKNQNKGNDMDKYKDQLKDIATETKLSDNAFTTKV 271 Query: 305 VKKLRSNAIIHY 316 + + +A + Sbjct: 272 IGEELKDANVKI 283 >gi|307706477|ref|ZP_07643286.1| foldase protein prsA [Streptococcus mitis SK321] gi|307618187|gb|EFN97345.1| foldase protein prsA [Streptococcus mitis SK321] Length = 312 Score = 37.3 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 79/313 (25%), Gaps = 41/313 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L + ++ K + I G+VIT+ +++ N + Sbjct: 3 KKLLAGAITLLSVATLAACSKGSEGADLISMK--GDVITEHQFYEQVKS------NPSAQ 54 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++ + I + +KQ + ++T+ Q+ N L+ Sbjct: 55 QVLLNLTIQKVFEKQYGSEVDDKEVNDTIAEEEKQYGENYQRVLSQAGMTLET------- 107 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 Q +V+ E E+ + K + ++ ++K + Sbjct: 108 ----RKAQIRTSKLVELAVK---KAAEAELTDDAYKKAFDEYTPDVTAQIIRLDNEDKAK 160 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLK 251 K + K + + G+ + S P + Sbjct: 161 EILEKAKASGADFTQLAKDNSTDEKTKA--------NGGEITFDSASTEVPDQVKKAAFA 212 Query: 252 KSQNNTTNPYVT------QKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHE--A 302 N ++ + + K + I K L K Sbjct: 213 LDVNGISDVITATGTQAYSSQYYIVKLIKKTEKTSNIDDYKEKLKTVILTQKQNDASFVQ 272 Query: 303 EYVKKLRSNAIIH 315 + K A I Sbjct: 273 SIIGKELQAANIK 285 >gi|172056099|ref|YP_001812559.1| hypothetical protein Exig_0055 [Exiguobacterium sibiricum 255-15] gi|171988620|gb|ACB59542.1| hypothetical protein Exig_0055 [Exiguobacterium sibiricum 255-15] Length = 103 Score = 37.3 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 35/102 (34%), Gaps = 18/102 (17%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVP---------IVSYKSWAMSSRIRTTINGEVITDGDI 56 + + FI LL T F+ + + IV + T+ E IT D+ Sbjct: 8 YLWMLIFI-LLLTNFMTGAYAFMGELPKVDSPKIVQDSIGGPLEDVVATVGDEEITRADL 66 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98 + + EK + LI E ++KQ S T Sbjct: 67 YQTMR--------KGHEKETLDRLIREAVEKQSENGSKPTVK 100 >gi|301299775|ref|ZP_07206018.1| PPIC-type PPIASE domain protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852630|gb|EFK80271.1| PPIC-type PPIASE domain protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 206 Score = 37.3 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 23/209 (11%), Positives = 60/209 (28%), Gaps = 29/209 (13%) Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83 + I IV A S+ T +G IT+ + + K +Q++I+ Sbjct: 6 LVAISGIVLTFGLAACSKTVATTSGGKITESEYYSSMK-------KTSSGKQVLQQMILN 58 Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143 + ++E N + + S D ++ K + Sbjct: 59 KVLEKEYGSKVSDKKVN----------EQYNTYKKQYGSSFDSVLAQNDMTKSSFKQEIR 108 Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 ++K + ++ A ++ + + L ++ + I Sbjct: 109 SNLLLKEAVKDNTKITDKQLKAQWKEYEPK------------VTVAHILVSKKSTAEDII 156 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIG 232 + + +K+++ + G Sbjct: 157 NKLKEDGSYANFKKLAKKYSTDSSTKNDG 185 >gi|326564633|gb|EGE14851.1| signal peptide peptidase SppA [Moraxella catarrhalis 46P47B1] gi|326565450|gb|EGE15621.1| signal peptide peptidase SppA [Moraxella catarrhalis 12P80B1] gi|326575606|gb|EGE25530.1| signal peptide peptidase SppA [Moraxella catarrhalis O35E] Length = 342 Score = 37.3 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 9/77 (11%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI------RTT--INGEVITDGDIS-KRI 60 S F+KLLT F++ ++ + RI +NG ++T+GD++ + I Sbjct: 50 SVFLKLLTFAFLVFFIIVLGFGCSGFGSSFERIGINEPHIAIIDVNGAIMTNGDVNAQNI 109 Query: 61 ALLKLQKINGELEKIAV 77 ++ K V Sbjct: 110 NDSLMEAFENNQAKAVV 126 >gi|225868897|ref|YP_002744845.1| foldase protein PrsA precursor [Streptococcus equi subsp. zooepidemicus] gi|259534750|sp|C0MCT3|PRSA_STRS7 RecName: Full=Foldase protein prsA; Flags: Precursor gi|225702173|emb|CAW99882.1| foldase protein PrsA precursor [Streptococcus equi subsp. zooepidemicus] Length = 333 Score = 37.3 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 31/306 (10%), Positives = 77/306 (25%), Gaps = 26/306 (8%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K ++ ++ + T+ G+ I+ D + Sbjct: 3 KSTKLLAGIVTLASAMTLAACQSTNDNTSVITMKGDTISVSDFYNETK------NTEVSQ 56 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + + ++ + Q +K N Q+ + + D Sbjct: 57 RAMLNLVVSRVFEDQYGKKVSKKKTEEAYNKSAEQYGASFSAALAQSGLTTDTY---KRQ 113 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 + + ++ + K + E + + IT+ + + Sbjct: 114 IRSAMLVEYAVKEAAKKELTDADYKKAYESYTPEMTTQVITLDNEETAKAILGEVKAEGA 173 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253 + + K A + ++ D + A I S L E D+ Sbjct: 174 DFAAIAKEKTTAADKKVDYKFDSGDTKLPADVIKAASG-----LKEGDISEVVS------ 222 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIE--KHEAEYVKKLRS 310 +P Q + + K + + K L K + + + + K Sbjct: 223 ---VLDPATYQNKFYIVKVTKKAEKASDWKKYKKRLKEIVLAEKTQNIDFQNKVIAKALD 279 Query: 311 NAIIHY 316 A + Sbjct: 280 KANVKI 285 >gi|307704713|ref|ZP_07641612.1| foldase protein prsA [Streptococcus mitis SK597] gi|307621760|gb|EFO00798.1| foldase protein prsA [Streptococcus mitis SK597] Length = 312 Score = 37.3 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 38/314 (12%), Positives = 82/314 (26%), Gaps = 43/314 (13%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K L + ++ K + I G+VIT+ +++ N + Sbjct: 3 KKLLAGAITLLSVATLAACSKGSEGADLISMK--GDVITEHQFYEQVKS------NPSAQ 54 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 ++ + I + +KQ + ++T+ Q+ N L+ Sbjct: 55 QVLLNLTIQKVFEKQYGSEVDDKEVNDTIAEEEKQYGENYQRVLSQAGMTLET------- 107 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 Q +V+ E E+ + K + ++ ++K + Sbjct: 108 ----RKAQIRTSKLVELAVK---KAAEAELTDDAYKKAFDEYTPDVTAQIIRLDNEDKAK 160 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QNLLK 251 K + K + + G+ + S P+ + Sbjct: 161 EVLEKAKAEGADFAQLAKDNSTDEKTKA--------NGGEITFDSASTEVPEQVKKAAFA 212 Query: 252 KSQNNTTNPYVTQKG-------VEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK--HE 301 N ++ T G + + K + I K L K Sbjct: 213 LDVNGVSDVI-TAAGTQAYSSQYYIVKLIKKTEKSSNIDDYKEKLKTVILTQKQNDSTFV 271 Query: 302 AEYVKKLRSNAIIH 315 + K A I Sbjct: 272 QSIIGKELQAANIK 285 >gi|302551954|ref|ZP_07304296.1| lipoprotein [Streptomyces viridochromogenes DSM 40736] gi|302469572|gb|EFL32665.1| lipoprotein [Streptomyces viridochromogenes DSM 40736] Length = 215 Score = 37.3 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 42/123 (34%), Gaps = 15/123 (12%) Query: 43 RTTINGEVITDGDISKRI---------------ALLKLQKINGELEKIAVQELIVETLKK 87 + G+ IT + +R+ + G L + + ++++ + Sbjct: 34 AAVVGGQRITVSQLEERVGEVRAAQRAAVQNDAQYQQAIARTGTLTRDTLHTMVLDRVLH 93 Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147 + E +G+T + G + +++L + GI ++ L +Q + Sbjct: 94 RAAENAGVTVTRREMQEMRSGLEEQAGGAKALETTWLQQYGIPPQRLEENLRLQLEAQKL 153 Query: 148 VKN 150 + Sbjct: 154 AEK 156 >gi|261289621|ref|XP_002604787.1| hypothetical protein BRAFLDRAFT_119476 [Branchiostoma floridae] gi|229290115|gb|EEN60797.1| hypothetical protein BRAFLDRAFT_119476 [Branchiostoma floridae] Length = 671 Score = 37.3 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 23/279 (8%), Positives = 73/279 (26%), Gaps = 21/279 (7%) Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQ- 108 I D D+ + +L + + + E LI + + Sbjct: 169 ILDTDVFRLPPNDQLDDLPSDWLNGLLDEPLIPDKPLNDVSLAPPPQIQAEHSYSMMSAA 228 Query: 109 ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + + E+ + + + + D+ + + +++ Sbjct: 229 DLAMEESLRIKTEENDFDMADWMTSGHMDHGMMHDDPMDYDMGNTAYHMAEQMEPLDLIK 288 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK--FA 223 K + + + + L + + + P ++ + Sbjct: 289 IKTEPTDPDLYFHTGADDLDVQMPPTPPSSASSDSEGGSSPRAIPDSPTRPTFSKQAGQS 348 Query: 224 SKIHDVSIGKAQYLLESDLHP--QFQNLLKKSQNNTTN--PYVTQKGVEYIAI-CDKRDL 278 S + G+ L P ++ + + P T + K + Sbjct: 349 SGPMSPNPGQNLLTNFQKLPPSGPLILTEEEKRTLISEGYPIPT-------KLPLTKAEE 401 Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 ++ + + + + + + EYV +L + + Sbjct: 402 KSLKKVRRKIKNKISAQESRRKKKEYVDQLEKR--VENF 438 >gi|323485490|ref|ZP_08090836.1| hypothetical protein HMPREF9474_02587 [Clostridium symbiosum WAL-14163] gi|323401138|gb|EGA93490.1| hypothetical protein HMPREF9474_02587 [Clostridium symbiosum WAL-14163] Length = 332 Score = 37.3 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 12/122 (9%), Positives = 24/122 (19%), Gaps = 6/122 (4%) Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 Q R S ++ + + + + + ES S Sbjct: 186 QAETADRQAAENLSLAAAQENADFEKCASDAGLSATTRQLGRKEESQ--EFEDAAFALSA 243 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + I + A + K E R + Sbjct: 244 GQVSQVIESNGTYYVIKCIS----DYDEEATAARKKIIFEERKRKAFKEIYDSFREGINL 299 Query: 315 HY 316 Y Sbjct: 300 TY 301 >gi|307637665|gb|ADN80115.1| Peptidyl-prolyl cis-trans isomerase [Helicobacter pylori 908] gi|325996265|gb|ADZ51670.1| Peptidyl-prolyl cis-trans isomerase [Helicobacter pylori 2018] gi|325997854|gb|ADZ50062.1| putative peptidyl-prolyl cis-trans isomerase D [Helicobacter pylori 2017] Length = 487 Score = 37.3 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 88/317 (27%), Gaps = 21/317 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK + +EL + +K +EKS DS A + GL A Sbjct: 61 RRLKDAYAESIPD---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISTLFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPNDVKISLNEEEMKKYYENHRKDFKKPTSFKTHSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKPDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EK-HEAEYVKKLRSNAI 313 + Y+ + NA Sbjct: 284 NEKALRSYIALKKGNAK 300 >gi|257886569|ref|ZP_05666222.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,141,733] gi|257822623|gb|EEV49555.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,141,733] Length = 303 Score = 37.3 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 26/313 (8%), Positives = 87/313 (27%), Gaps = 44/313 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + F+ + + + + + G I++ ++ + ++ Sbjct: 1 MKKKFLALAIVLGAGLLSGCTNAGEKTAVSYKGGTISEQEVMDSLKKMQG-------ADS 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 VQ+LI + + +K G + V+ + Q + G S + Q + + Sbjct: 54 TVQQLI---VYQVFEDKYGDDVSTKEVDSQYDQTKKQLGDSFDS-------QLKTAGYTE 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + ++ + ++ +N ++ Sbjct: 104 ETFKDSIKQSLAFQEGLKKHIKLTDEDLKTAWKTFHPEVE-----AQIIQVASENDAKDV 158 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF--QNLLKK 252 + + ++ GK ++ + P + K Sbjct: 159 KKAA----------DKGDDFSKLAKDKSTDTTTKEDGGKVKFDSTTTTVPTEVKEAAFKL 208 Query: 253 SQNNTTNPYVTQKG------VEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK--HEAE 303 ++ + + + ++ G ++ K L T TK+ + + Sbjct: 209 KDGQVSDVITSTNTSTYATEYYVVKMVKNQNKGNDMDKYKKELKEIATDTKLSDSTFQNK 268 Query: 304 YVKKLRSNAIIHY 316 + ++ +A + Sbjct: 269 VISEVLKDANVKI 281 >gi|145532789|ref|XP_001452150.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124419827|emb|CAK84753.1| unnamed protein product [Paramecium tetraurelia] Length = 480 Score = 37.3 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 47/169 (27%), Gaps = 1/169 (0%) Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102 ++ +V+T+ DI + I K+ ++ L+ + FD Sbjct: 51 VVIVDSKVVTESDIENNF-FIPHDTIGQSRAKVVLEYLLEMNQDVKGEWHQVENFDVKEQ 109 Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 +Y + + L G+ I + + L+ N E Sbjct: 110 HYDLIIANEQRFSETKFNLIELQTYGLVGRMRLYSPKCHIIETKPMNQKYDLRIFNPFQE 169 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211 + ++ +YL I LQ + + + + Sbjct: 170 LKEYFDSIEFEGDVDYLSHIPYIVILYKALQKYHKEKGKYPSTFSEKHK 218 >gi|255656246|ref|ZP_05401655.1| putative protein export chaperone [Clostridium difficile QCD-23m63] Length = 253 Score = 37.3 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 20/175 (11%), Positives = 51/175 (29%), Gaps = 4/175 (2%) Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE----LIVETL 85 + + SS + TI + IT + KR+ L + ++ +I + Sbjct: 78 LPATSKHYNSSEVVATIGDKKITGEMLRKRMEPLFYLNAKTTMTDDEIRSYESNMIETMI 137 Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145 + + N N S E ++ + + + Sbjct: 138 TSDILSSEAAKEKISITNDQLDAQYNNLMSSIESAMGMTKEEFLKQFDLTEKYIKDDMKK 197 Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200 ++V + ++ + + + N + +L D+K + +K Sbjct: 198 ELVASKYLNEKSKVTDKEAENYYNKNKNNYLQVRASHILIKTVDDKGKQVSNSKK 252 >gi|183221208|ref|YP_001839204.1| hypothetical protein LEPBI_I1822 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911299|ref|YP_001962854.1| cytoplasmic membrane lipoprotein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775975|gb|ABZ94276.1| Cytoplasmic membrane lipoprotein, LipL31 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779630|gb|ABZ97928.1| LipL31; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 225 Score = 37.3 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 43/144 (29%), Gaps = 3/144 (2%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL-LKLQKINGELEKIAVQE 79 +L +F + + + SS + T++ IT D L +EK + E Sbjct: 4 ILPLFVFLASFALVQCSDSSPVIETLDNHKITVKDFEAAYDTALDSISRLQNIEKKTLLE 63 Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139 I + E+ + + F Q R ++ + + Sbjct: 64 FIEKD--INEVPPNFQDLNYQLQKKNFYQTYRQMIMTRLVAEKNGYISRPDVAEVIKQVE 121 Query: 140 IQSIWPDVVKNDFMLKYGNLEMEI 163 +Q+I V K E + Sbjct: 122 MQTIAQMYVSEQVEKKIQITEEQA 145 >gi|315638232|ref|ZP_07893414.1| peptidyl-prolyl cis-trans isomerase D,-like protein [Campylobacter upsaliensis JV21] gi|315481768|gb|EFU72390.1| peptidyl-prolyl cis-trans isomerase D,-like protein [Campylobacter upsaliensis JV21] Length = 501 Score = 37.3 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 25/231 (10%), Positives = 61/231 (26%), Gaps = 18/231 (7%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------- 63 + + + + +V +Y + + E I+ + + R + Sbjct: 14 VTIWISVIAFVGAGVVGWGAYDYNQNRNSSVAIVGNEKISFVEFNLRYNQIYGYYNQISN 73 Query: 64 ----KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 + L+ IA+ LI + L + G+ + N V ++ Sbjct: 74 GALSEENAEKLGLKDIALNSLIEDKLLLNFAKNLGLWANENEVIQELSAAEEFQNVNGIF 133 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN-----DFMLKYGNLEMEIPANKQKMKNIT 174 + +N + ++ +F K L+M + + Sbjct: 134 DKNIYYAILKQNNILSKNYEQILGDRIILNKLNKIFEFPAKENELQMLAASYFMQDALEI 193 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 + + L + Q + K + L K F+ Sbjct: 194 AKITFDKKDLAVDENALKQLWEAHKNDFKTQKSYELSSYFIEAKKSNFSQD 244 >gi|257897789|ref|ZP_05677442.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium Com15] gi|257835701|gb|EEV60775.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium Com15] Length = 303 Score = 37.3 bits (84), Expect = 3.0, Method: Composition-based stats. Identities = 27/312 (8%), Positives = 85/312 (27%), Gaps = 44/312 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + F+ + + + + + G I++ ++ + ++ Sbjct: 1 MKKRFLALAIVLGAGLLSGCTNAGEKTAVSYKGGTISEQEVMDSLKKMQG-------ADS 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 VQ+LI + + +K G + V+ + Q + G S + Q K Sbjct: 54 TVQQLI---VYQVFEDKYGDDVSTKEVDSQYDQTKKQLGDSFDS-------QLKTAGLTK 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + ++ + ++ +N ++ Sbjct: 104 ETFKDSIKQRLAFQEGLKKHIKLTDEDLKTAWKTFHPEVE-----AQIIQVASENDAKDV 158 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF--QNLLKK 252 + + ++ GK ++ + P + K Sbjct: 159 KKAA----------DKGDDFSKLAKDKSTDTTTKEDGGKVKFDSTTTTVPTEVKEAAFKL 208 Query: 253 SQNNTTNPYVTQKG------VEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK--HEAE 303 ++ + + + ++ G ++ K L T TK+ + Sbjct: 209 KDGQVSDVITSTNTSTYATEYYVVKMVKNQNKGNDMDKYKKELKEIATETKLNDSTFRNK 268 Query: 304 YVKKLRSNAIIH 315 + ++ +A + Sbjct: 269 VIGEVLKDANVK 280 >gi|296113528|ref|YP_003627466.1| signal peptide peptidase SppA [Moraxella catarrhalis RH4] gi|295921222|gb|ADG61573.1| signal peptide peptidase SppA [Moraxella catarrhalis RH4] gi|326559531|gb|EGE09945.1| signal peptide peptidase SppA [Moraxella catarrhalis 7169] gi|326562731|gb|EGE13033.1| signal peptide peptidase SppA [Moraxella catarrhalis 103P14B1] gi|326567786|gb|EGE17892.1| signal peptide peptidase SppA [Moraxella catarrhalis BC1] gi|326568577|gb|EGE18648.1| signal peptide peptidase SppA [Moraxella catarrhalis BC7] gi|326568702|gb|EGE18772.1| signal peptide peptidase SppA [Moraxella catarrhalis BC8] gi|326572571|gb|EGE22560.1| signal peptide peptidase SppA [Moraxella catarrhalis CO72] gi|326574167|gb|EGE24115.1| signal peptide peptidase SppA [Moraxella catarrhalis 101P30B1] Length = 342 Score = 37.3 bits (84), Expect = 3.0, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 9/77 (11%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI------RTT--INGEVITDGDIS-KRI 60 S F+KLLT F++ ++ + RI +NG ++T+GD++ + I Sbjct: 50 SVFLKLLTFAFLVFFIIVLGFGCSGFGSSFERIGINEPHIAIIDVNGAIMTNGDVNAQNI 109 Query: 61 ALLKLQKINGELEKIAV 77 ++ K V Sbjct: 110 NDSLMEAFENNQAKAVV 126 >gi|298490129|ref|YP_003720306.1| hypothetical protein Aazo_0730 ['Nostoc azollae' 0708] gi|298232047|gb|ADI63183.1| conserved hypothetical protein ['Nostoc azollae' 0708] Length = 261 Score = 37.3 bits (84), Expect = 3.0, Method: Composition-based stats. Identities = 17/225 (7%), Positives = 60/225 (26%), Gaps = 13/225 (5%) Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138 L+ ++ I + + Q A + L+ + + + ++ Sbjct: 24 NLLEAVATRRTIVDTAVQEGIQIEIQELQQAADSLRLANKLIKAEDTWAWLEKHYLSLDN 83 Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 + +++ ++E ++ Y + ++ Sbjct: 84 FEEIAQLNLLSAKLANHLFADKVEPFFYAHQLDYTGAVTYEVIL----------DDEDLA 133 Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNT 257 + +E + + + A G +D P+ + + + Sbjct: 134 LEIFYSLQEGEISFQEIARQYIDNAEIRRA--GGYQGIRKRNDFRPEIASAIFAANPPQI 191 Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 P +T KG I + + ++ + + +++ Sbjct: 192 LKPIITPKGAHIIMVEEIIKPQLNEQMRLKIMGELFTNWLKQQVN 236 >gi|195977800|ref|YP_002123044.1| foldase protein PrsA [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|226712006|sp|B4U214|PRSA_STREM RecName: Full=Foldase protein prsA; Flags: Precursor gi|195974505|gb|ACG62031.1| foldase protein PrsA precursor [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 333 Score = 37.3 bits (84), Expect = 3.0, Method: Composition-based stats. Identities = 36/310 (11%), Positives = 86/310 (27%), Gaps = 34/310 (10%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 K ++ ++ + T+ G+ I+ D N E+ Sbjct: 3 KSTKLLAGIVTLASAMTLAACQSTNDNTSVITMKGDTISVSDFYNETK-------NTEIS 55 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + A+ L+V + + + K + ++ FS+ L + G+ + Sbjct: 56 QRAMLNLVVSRVFEDQYGKKVSKKKTEEAYN------KSAEQYGASFSAALAQSGLTTDT 109 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV----REYLIRTVLFSIPD 189 +K+ + + VK + + + + + T + Sbjct: 110 YKRQIRSAMLVEYAVKEAAKKELTDADYKKAYESYTPEMTTQVITLDNEETAKAILGEVK 169 Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + + K A + ++ D + A I S L E D+ Sbjct: 170 AEGADFAAIAKEKTTAADKKVDYKFDSGDTKLPADVIKAASG-----LKEGDISEVVS-- 222 Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIE--KHEAEYVK 306 +P Q + + K + + K L K + + + + Sbjct: 223 -------VLDPATYQNKFYIVKVTKKAEKASDWKKYKKRLKEIVLAEKTQNIDFQNKVIA 275 Query: 307 KLRSNAIIHY 316 K A + Sbjct: 276 KALDKANVKI 285 >gi|189183869|ref|YP_001937654.1| protein export protein PrsA precursor [Orientia tsutsugamushi str. Ikeda] gi|189180640|dbj|BAG40420.1| protein export protein PrsA precursor [Orientia tsutsugamushi str. Ikeda] Length = 343 Score = 37.3 bits (84), Expect = 3.0, Method: Composition-based stats. Identities = 18/209 (8%), Positives = 53/209 (25%), Gaps = 13/209 (6%) Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170 S + ++ +Q + + + +L +++ K Sbjct: 79 SFYSYSLQQQQDLIEAYVTDKLLEEQVKKLNVENDLTFQEALKVLKRSLAVQVLLKKNVP 138 Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 + S Q++ K+ ++ + ++ + Sbjct: 139 ALKEDEYPFYQKQFASEKVKISHILLNSQEKAKEVKDKLSKGESFEKLAKEESLDKETKE 198 Query: 231 IGKAQ--YLLESDLHPQFQNLLKKSQNNTTNPYV-TQKGVEYIAICDKRDLGGEIALKAY 287 G + + DL + + P ++ + I + K I K Sbjct: 199 NGGLVEHWFFQGDLPESI---FAMQEGGVSEPMQLSKTAWQLIKLNSK---VPHIPSKEE 252 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316 ++ + +Y + L A + Sbjct: 253 INEYTFNIR----VKKYARDLYDAANVKI 277 >gi|108563383|ref|YP_627699.1| peptidyl-prolyl cis-trans isomerase D [Helicobacter pylori HPAG1] gi|107837156|gb|ABF85025.1| peptidyl-prolyl cis-trans isomerase D [Helicobacter pylori HPAG1] Length = 487 Score = 37.3 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 31/327 (9%), Positives = 82/327 (25%), Gaps = 48/327 (14%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + ++++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYNFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALL---------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 L K Q LEK A+ LI + L + G+ V Sbjct: 61 RRLKDAYAESIPDFKELTKDQIKAMHLEKSALDSLINQALLRNLALDLGLGATKQEVAKE 120 Query: 106 FVQH--ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163 + + G+ E+ + KQ + + + + F LE Sbjct: 121 IRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISALFPKTTTPLEQSS 180 Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223 + K+++ + + + + K +K Sbjct: 181 LSLWAKLQDKL-------------------DILILNPSDVKISLNEEEMKKYYESHKKDF 221 Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283 K + + + +N + + + L + Sbjct: 222 KKPTSFKTRSLYFDASLEKPDLKELEEYYHKNKVS------------YLDKEGKLQDFKS 269 Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRS 310 ++ + + K + L+ Sbjct: 270 VQEQVKHDLSMQKANEKALRSYIALKK 296 >gi|315931795|gb|EFV10750.1| Peptidylprolyl isomerase [Campylobacter jejuni subsp. jejuni 327] Length = 80 Score = 37.3 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 4/79 (5%) Query: 242 LHPQFQNLLKKSQNNT--TNPYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKI 297 + F + +N T T P T G I + + +K + + Sbjct: 1 MVKPFTDAAFALKNGTITTTPVKTNFGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEF 60 Query: 298 EKHEAEYVKKLRSNAIIHY 316 +K + + L ++A + Y Sbjct: 61 KKVINQKGQDLLNSAKVEY 79 >gi|325300048|ref|YP_004259965.1| peptidyl-prolyl cis-trans isomerase [Bacteroides salanitronis DSM 18170] gi|324319601|gb|ADY37492.1| peptidyl-prolyl cis-trans isomerase [Bacteroides salanitronis DSM 18170] Length = 404 Score = 37.3 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 236 YLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 + + L +F + + + T P+++ GV I + D++ YL Sbjct: 141 WRPVAGLLQEFSSRLERLEKGTYTTPFLSPLGVHIIRLADRKPAVSYEEAYPYL 194 >gi|158337133|ref|YP_001518308.1| hypothetical protein AM1_4008 [Acaryochloris marina MBIC11017] gi|158307374|gb|ABW28991.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 234 Score = 37.3 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 26/244 (10%), Positives = 61/244 (25%), Gaps = 20/244 (8%) Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 +L+ K N L ++ Q L + + + ++ N A D Sbjct: 1 MLEALKQNMSLVEVCEQILKQKIILQTADSQNITVTPEEIQNEVDEIRRNKHLEKASDTM 60 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 ++L++Q I + ++ + + + K+ F + E N + + Sbjct: 61 AWLNEQMITPDEWEIVIQNHVLTKKLAKHLFEEQVEPFFAERRLNFDRFVVYQISLDCQN 120 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 + + F + + R G Sbjct: 121 LAQELFYQIEEEEISFYEAARLYNLDESARYL-----------------CGYTGQKNRLS 163 Query: 242 LHPQFQNLLKKSQ---NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298 P + + P T+ + I + + L+ + I Sbjct: 164 FSPDIAAAIFQDPLPIGILIGPLQTEDVYHLLRIEEHIPVELTPELRQEILHSLFDEWIN 223 Query: 299 KHEA 302 K Sbjct: 224 KEIE 227 >gi|306844003|ref|ZP_07476598.1| rotamase family protein [Brucella sp. BO1] gi|306275758|gb|EFM57482.1| rotamase family protein [Brucella sp. BO1] Length = 628 Score = 37.3 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 63/263 (23%), Gaps = 12/263 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----I 56 M + ++ +I L +++ F I I M+ T ++ D Sbjct: 1 MLDSLRSAAQSWIAKLLLGLLVLSFAIWGISDVFRGGMAGNAALTAGDSEVSATDYRFAY 60 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +++ L Q + A + + Q + + + Q A + Sbjct: 61 EQQLMRLSQQFRQRLTREQAKAIGVENQVLAQLAAGVVLDEAARNMQLGLSQDAIARLTA 120 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + D ++N + +E + K+ + ++ Sbjct: 121 EDPAFHDAGGNFNRARFDAVLRQSGIRAEDYLENRAKVARRQQIVEAATDGMKLPDTMLK 180 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + D +E+ E K Y Sbjct: 181 ALALYQGESRSADYIDVPAEKADAIPAPSEDVLKAY------FEAHKEDYKAPEYRKISY 234 Query: 237 LLESDLHPQFQNLLKKSQNNTTN 259 + + +Q+ + Sbjct: 235 VKLE--PSDIADPAAVTQDEISE 255 >gi|224436614|ref|ZP_03657623.1| hypothetical protein HcinC1_01640 [Helicobacter cinaedi CCUG 18818] gi|313143113|ref|ZP_07805306.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313128144|gb|EFR45761.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 492 Score = 37.3 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 38/387 (9%), Positives = 97/387 (25%), Gaps = 87/387 (22%) Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--- 63 + + + I +V SY + + + + I + + A + Sbjct: 4 HKKWLIVTIWVSAIAFIGAGMVNWGSYGFGSSNDK-VARVGDIDIHLAEFQREYARILNE 62 Query: 64 ------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA- 110 + Q + ++A+Q LI + G+ V V Sbjct: 63 FSQISQFGGMLDEAQAKQFGIPQMALQRLIQQVQILNLANDLGLVVSDKEVGEEIVNAKV 122 Query: 111 ---RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------------------ 149 S E + L +QG+ + F++ + + Sbjct: 123 YVDDKGEFSQEVYRKALKEQGMSPSEFEEMVRKILTTQKLFSVMNITQVGPMLPISSSEM 182 Query: 150 --------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189 + ++ + E++ K + E+ I +L Sbjct: 183 AALEMANAVRDRLRVEILPMDKVNIEIEDDELKAFWEKNAENWKSPMEFKIEYILVPFAS 242 Query: 190 NKLQNQGFV--------------------QKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 ++ ++ + + ++ + ++ + Sbjct: 243 QNPTDEDLTKHYQDFKSDYLDENGNLLSFEESKEKLIKDVQKIQAESVAKREYRDLKNKS 302 Query: 230 SIGKAQYLLESD-------LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGG 280 G+ L E++ + +++ P KG + I DK+ Sbjct: 303 KKGEILSLKENERFFVKNGVDLVIEDMKVAQVGQVLKPIEVDKGFVTLRILDKKPSVQKS 362 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKK 307 KA +K + K+ Sbjct: 363 FEEAKAEAKVLFESSKKREKLLALAKE 389 >gi|254706677|ref|ZP_05168505.1| rotamase family protein [Brucella pinnipedialis M163/99/10] gi|261314138|ref|ZP_05953335.1| rotamase [Brucella pinnipedialis M163/99/10] gi|261303164|gb|EEY06661.1| rotamase [Brucella pinnipedialis M163/99/10] Length = 628 Score = 37.3 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 63/263 (23%), Gaps = 12/263 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----I 56 M + ++ +I L +++ F I I M+ T ++ D Sbjct: 1 MLDSLRSAAQSWIAKLLLGLLVLSFAIWGISDVFRGGMAGNAALTAGDSEVSATDYRFAY 60 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +++ L Q + A + + Q + + + Q A + Sbjct: 61 EQQLMRLSQQFRQRLTREQAKAIGVENQVLAQLAAGVVLDEAARNMQLGLSQDAIARLTA 120 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + D ++N + +E + K+ + ++ Sbjct: 121 EDPAFHDAGGNFNRARFDAVLRQSGIRAEDYLENRAKVARRQQIVEAATDGMKLPDTMLK 180 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + D +E+ E K Y Sbjct: 181 ALALYQGESRSADYIDVPAEKADAIPAPSEDVLKAY------FEAHKEDYKAPEYRKISY 234 Query: 237 LLESDLHPQFQNLLKKSQNNTTN 259 + + +Q+ + Sbjct: 235 VKLE--PSDIADPAAVTQDEISE 255 >gi|301166902|emb|CBW26481.1| hypothetical protein BMS_1638 [Bacteriovorax marinus SJ] Length = 502 Score = 37.3 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 23/207 (11%), Positives = 57/207 (27%), Gaps = 2/207 (0%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + T L P S + + + T++ EVIT+ D+ + I ++ + Sbjct: 1 MKRIATLICLTGILASPFTSAREKELIAWKVTSVGNEVITNYDVDQFIEHTQISDSLKTI 60 Query: 73 --EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 ++ + LK + +K+ + +Q ++ + + + Sbjct: 61 LFKRANKNYSEYQKLKSEIAKKNFNKSAGQLIYAHMMQKDHQRKHGSKRVAFKVTEDTFY 120 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + D + E I + + R Sbjct: 121 KAIQDNETKVLRHLLDTGIGIVKSREQFGEFLISQAYPHQSGESATDVYWRWYEDQKARI 180 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCN 217 K + K + R + + Sbjct: 181 KTELFLKEVKNYEAYIALRNQKYYHTD 207 >gi|254714212|ref|ZP_05176023.1| rotamase family protein [Brucella ceti M644/93/1] gi|254717648|ref|ZP_05179459.1| rotamase family protein [Brucella ceti M13/05/1] gi|261219487|ref|ZP_05933768.1| rotamase [Brucella ceti M13/05/1] gi|261321982|ref|ZP_05961179.1| rotamase [Brucella ceti M644/93/1] gi|260924576|gb|EEX91144.1| rotamase [Brucella ceti M13/05/1] gi|261294672|gb|EEX98168.1| rotamase [Brucella ceti M644/93/1] Length = 628 Score = 37.3 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 63/263 (23%), Gaps = 12/263 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----I 56 M + ++ +I L +++ F I I M+ T ++ D Sbjct: 1 MLDSLRSAAQSWIAKLLLGLLVLSFAIWGISDVFRGGMAGNAALTAGDSEVSATDYRFAY 60 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +++ L Q + A + + Q + + + Q A + Sbjct: 61 EQQLMRLSQQFRQRLTREQAKAIGVENQVLAQLAAGVVLNEAARNMQLGLSQDAIARLTA 120 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + D ++N + +E + K+ + ++ Sbjct: 121 EDPAFHDAGGNFNRARFDAVLRQSGIRAEDYLENRAKVARRQQIVEAATDGMKLPDTMLK 180 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + D +E+ E K Y Sbjct: 181 ALALYQGESRSADYIDVPAEKADAIPAPSEDVLKAY------FEAHKEDYKAPEYRKISY 234 Query: 237 LLESDLHPQFQNLLKKSQNNTTN 259 + + +Q+ + Sbjct: 235 VKLE--PSDIADPAAVTQDEISE 255 >gi|121635518|ref|YP_975763.1| hypothetical protein NMC1824 [Neisseria meningitidis FAM18] gi|120867224|emb|CAM10993.1| hypothetical protein NMC1824 [Neisseria meningitidis FAM18] Length = 239 Score = 37.3 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 12/166 (7%), Positives = 45/166 (27%), Gaps = 9/166 (5%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V + + E ++ + ++ Q ++ + A+ Sbjct: 73 VQNRFKIAEASFYAEEYVRFLERSETVSESALRQFYERQIRMIKLQQVSFATEEEARQAQ 132 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTT-NPYVTQ 264 + L+ ++++ + +++ L + ++ + T NP Sbjct: 133 QLLLKGLSFEGLMKRYPNDEQAFD----GFIMAQQLPEPLASQFAAMNRGDVTRNPVKLG 188 Query: 265 KGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + + D ++ L K +++ Sbjct: 189 ERYYLFKLSEVGKNPDAQPFELVRNQLEQGLRQEKARLKIDALLEE 234 >gi|170017429|ref|YP_001728348.1| parvulin-like peptidyl-prolyl isomerase [Leuconostoc citreum KM20] gi|169804286|gb|ACA82904.1| Parvulin-like peptidyl-prolyl isomerase [Leuconostoc citreum KM20] Length = 303 Score = 37.0 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 85/301 (28%), Gaps = 35/301 (11%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + +I I SS+ T + IT+ + + + Sbjct: 1 MRKFIWGLIIVIFGGGLIYLGFNSSKTLMTSDSGKITEKEFVADLK-------QSPAGQQ 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 L++ + ++ G + V F G + F S L ++ FK Sbjct: 54 EFANLVINKVLA---KQYGGNVSKSDVQNAFDTQKAQYG---DSFQSVLSSNNTNESQFK 107 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + I VK ++ + +E Q + + +I K + Sbjct: 108 NNIKNNLIMKAAVKANYKVSDKQIEQAYKDYHQDTTVSLITAKDEDSSKKAIDALKSGDS 167 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255 + +++ + + ++ + ++K+ + Sbjct: 168 WETVYKKYSTDKTYAKQNGQLPAFDSTSTSV-------------DSAIQTAAFKIEKTGD 214 Query: 256 NTTNPYV-TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 TT P + G I + + +++ LS Q ++ ++ A I Sbjct: 215 YTTTPVTGSNGGFYVIQLNKTTNKPSMNSVRNKLSEQI--------VTSFLNDQKNTAKI 266 Query: 315 H 315 Sbjct: 267 Q 267 >gi|311070875|ref|YP_003975798.1| putative lipoprotein [Bacillus atrophaeus 1942] gi|310871392|gb|ADP34867.1| putative lipoprotein [Bacillus atrophaeus 1942] Length = 257 Score = 37.0 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 61/189 (32%), Gaps = 13/189 (6%) Query: 41 RIRTTINGEVITDGDISKRIALLKLQKIN-----------GELEKIAVQELIVETLKKQE 89 + +N E +T D + + + Q +++K + L+ +TL QE Sbjct: 67 KTVAIVNNEKLTGSDYNSVLTSAQTQYQQSGQDPTSKDAAKQIKKQTINSLVGQTLLLQE 126 Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 K G V+ + + E ++ G+ K LA + V+ Sbjct: 127 ANKKGYKASDKEVDKQLAESKKQYKSDKEFNAALKKA-GLNTTKLKSELADNIKYEKYVE 185 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209 + K + E+ + + S +++ Q QK+ + + Sbjct: 186 KEV-PKDKVTDKEVKDYYDQYAAKQGSSEGQKLPKLSEVKTQIKQQLEQQKQQEKLVKQV 244 Query: 210 LRLPKDCNK 218 +L K+ Sbjct: 245 EKLKKNAKL 253 >gi|293571342|ref|ZP_06682373.1| foldase protein PrsA [Enterococcus faecium E980] gi|291608558|gb|EFF37849.1| foldase protein PrsA [Enterococcus faecium E980] Length = 336 Score = 37.0 bits (83), Expect = 3.5, Method: Composition-based stats. Identities = 30/309 (9%), Positives = 75/309 (24%), Gaps = 38/309 (12%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76 + + + + +++ T+ G IT D L + Sbjct: 4 KSIILAATSALAVLTLAACSGDTNKDIATMKGGTITVSDFYDEAKL-------ESSNQSL 56 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 VQ +I+ + K G V+ + + A++ G + E Q + K Sbjct: 57 VQRMIIYKV---FNNKYGDKVTDKQVDAEYDKQAKSLGDTFES-------QLETAGYTKD 106 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196 + + ++ + + Sbjct: 107 SYKEYIRNNLAFEAGLKAHVDITDDDLKTAWESFHPE------------VEAQIIKLSSE 154 Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256 K +K + + K + D K + + K Sbjct: 155 DEAKDVKKSADDGDDFSKLAKDKSTDSETKEDGGKVKFDSTTTTIPAEVKEAAFKLKDGE 214 Query: 257 TTNPYVTQKG------VEYIAICDKRDLGGEIAL-KAYLSAQNTPTKI--EKHEAEYVKK 307 ++ + + ++ G ++ K L T TK+ + + + Sbjct: 215 VSDVITATNTTSYATEYYVVKMVKNQNKGNDMDKYKDQLKEIATETKLSDNTFTTKVIGE 274 Query: 308 LRSNAIIHY 316 +A + Sbjct: 275 ELKDANVKI 283 >gi|332687190|ref|YP_004456964.1| foldase protein PrsA , clustered with pyrimidine conversion [Melissococcus plutonius ATCC 35311] gi|332371199|dbj|BAK22155.1| foldase protein PrsA precursor, clustered with pyrimidine conversion [Melissococcus plutonius ATCC 35311] Length = 327 Score = 37.0 bits (83), Expect = 3.5, Method: Composition-based stats. Identities = 35/315 (11%), Positives = 87/315 (27%), Gaps = 43/315 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRI--RTTINGEVITDGDISKRIALLKLQKINGELE 73 + VL + + + + + S + T+ G IT D +I + + Sbjct: 1 MKKKLVLAAAGVFSVFALAACSSSDKNEDIATMKGSTITVQDFYDQIKHEQSSQQQVM-- 58 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133 + K +K G V+ + + A+ +L + G Sbjct: 59 --------QMIVYKVFDDKYGKKVSDKDVDKQYDETAKAAEAQGTTIEDYLKQNGQTVKE 110 Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 +K+ + + +++ K N +++ + + Sbjct: 111 YKKTIKQGLAYQKGIEDHI--KISNKDLKTAWKSFHPEVEAQIIQIP------------- 155 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF--QNLL 250 +K KD ++ ++ ++ GK ++ ++ PQ Sbjct: 156 ----AEKDAKDIKKQLTDGGDFTKIAKEKSTDNQTKKDGGKIKFDSQTQSIPQEVKDAAF 211 Query: 251 KKSQNNTTNPYVT------QKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE-- 301 K + P T Q + + + G + L TK+ Sbjct: 212 KLKDGEVSEPIQTTNSSTYQSSYYLVKMNKNKAKGNDMKPYNKELKKIAKQTKMNDQAFT 271 Query: 302 AEYVKKLRSNAIIHY 316 + + +A + Sbjct: 272 TKVIGDELKDANVKI 286 >gi|163843404|ref|YP_001627808.1| rotamase family protein [Brucella suis ATCC 23445] gi|163674127|gb|ABY38238.1| rotamase family protein [Brucella suis ATCC 23445] Length = 628 Score = 37.0 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 63/263 (23%), Gaps = 12/263 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----I 56 M + ++ +I L +++ F I I M+ T ++ D Sbjct: 1 MLDSLRSAAQSWIAKLLLGLLVLSFAIWGISDVFRGGMAGNAALTAGDSEVSATDYRFAY 60 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +++ L Q + A + + Q + + + Q A + Sbjct: 61 EQQLMRLSQQFRQRLTREQAKAIGVENQVLAQLAAGVVLDEAARNMQLGLSQDAIARLTA 120 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + D ++N + +E + K+ + ++ Sbjct: 121 EDPAFHDAGGNFNRARFDAVLRQSGIRAEDYLENRAKVARRQQIVEAATDGMKLPDTMLK 180 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + D +E+ E K Y Sbjct: 181 ALALYQGESRSADYIDVPAEKADAIPAPSEDVLKAY------FEAHKEDYKAPEYRKISY 234 Query: 237 LLESDLHPQFQNLLKKSQNNTTN 259 + + +Q+ + Sbjct: 235 VKLE--PSDIADPAAVTQDEISE 255 >gi|23502017|ref|NP_698144.1| rotamase family protein [Brucella suis 1330] gi|161619091|ref|YP_001592978.1| rotamase family protein [Brucella canis ATCC 23365] gi|254704427|ref|ZP_05166255.1| rotamase family protein [Brucella suis bv. 3 str. 686] gi|254710215|ref|ZP_05172026.1| rotamase family protein [Brucella pinnipedialis B2/94] gi|256031709|ref|ZP_05445323.1| rotamase family protein [Brucella pinnipedialis M292/94/1] gi|256369565|ref|YP_003107075.1| rotamase family protein [Brucella microti CCM 4915] gi|260566326|ref|ZP_05836796.1| peptidyl-prolyl cis-trans isomerase D [Brucella suis bv. 4 str. 40] gi|261317773|ref|ZP_05956970.1| rotamase [Brucella pinnipedialis B2/94] gi|261755104|ref|ZP_05998813.1| rotamase [Brucella suis bv. 3 str. 686] gi|265988804|ref|ZP_06101361.1| rotamase [Brucella pinnipedialis M292/94/1] gi|23347969|gb|AAN30059.1| rotamase family protein [Brucella suis 1330] gi|161335902|gb|ABX62207.1| rotamase family protein [Brucella canis ATCC 23365] gi|255999727|gb|ACU48126.1| rotamase family protein [Brucella microti CCM 4915] gi|260155844|gb|EEW90924.1| peptidyl-prolyl cis-trans isomerase D [Brucella suis bv. 4 str. 40] gi|261296996|gb|EEY00493.1| rotamase [Brucella pinnipedialis B2/94] gi|261744857|gb|EEY32783.1| rotamase [Brucella suis bv. 3 str. 686] gi|264661001|gb|EEZ31262.1| rotamase [Brucella pinnipedialis M292/94/1] Length = 628 Score = 37.0 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 63/263 (23%), Gaps = 12/263 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----I 56 M + ++ +I L +++ F I I M+ T ++ D Sbjct: 1 MLDSLRSAAQSWIAKLLLGLLVLSFAIWGISDVFRGGMAGNAALTAGDSEVSATDYRFAY 60 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +++ L Q + A + + Q + + + Q A + Sbjct: 61 EQQLMRLSQQFRQRLTREQAKAIGVENQVLAQLAAGVVLDEAARNMQLGLSQDAIARLTA 120 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + D ++N + +E + K+ + ++ Sbjct: 121 EDPAFHDAGGNFNRARFDAVLRQSGIRAEDYLENRAKVARRQQIVEAATDGMKLPDTMLK 180 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + D +E+ E K Y Sbjct: 181 ALALYQGESRSADYIDVPAEKADAIPAPSEDVLKAY------FEAHKEDYKAPEYRKISY 234 Query: 237 LLESDLHPQFQNLLKKSQNNTTN 259 + + +Q+ + Sbjct: 235 VKLE--PSDIADPAAVTQDEISE 255 >gi|323694481|ref|ZP_08108651.1| hypothetical protein HMPREF9475_03515 [Clostridium symbiosum WAL-14673] gi|323501469|gb|EGB17361.1| hypothetical protein HMPREF9475_03515 [Clostridium symbiosum WAL-14673] Length = 314 Score = 37.0 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 12/122 (9%), Positives = 24/122 (19%), Gaps = 6/122 (4%) Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 Q R S ++ + + + + + ES S Sbjct: 168 QAETADRQTAENLSLAAAQENADFEKCASDAGLSATTRQLGRKEESQ--EFEDAAFALSA 225 Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314 + + I + A + K E R + Sbjct: 226 GQVSQVIESNGTYYVIKCIS----DYDEEATAARKKIIFEERKRKAFKEIYDSFREGINL 281 Query: 315 HY 316 Y Sbjct: 282 TY 283 >gi|146343136|ref|YP_001208184.1| putative signal peptide [Bradyrhizobium sp. ORS278] gi|146195942|emb|CAL79969.1| conserved hypothetical protein; putative signal peptide [Bradyrhizobium sp. ORS278] Length = 303 Score = 37.0 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 71/263 (26%), Gaps = 26/263 (9%) Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 L + + L++ L V ++ + ++ + + Sbjct: 47 LREPLLHFLVLGGLIFAADAIMHPPAKDEKVITVTKALRQSFIDTFDEDKQRVPSEAELQ 106 Query: 132 NHFKQYLAIQSIWPD-----------VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + ++A + ++ + ++++ K L + Q + Sbjct: 107 KMTEAWVASEILYREGKLLGVDRGDEMIRDRVAFKLQYLIFDQVRVPQPTDEQLQAWFAE 166 Query: 181 RTVLF-----SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 F + +R D + + ++ + Sbjct: 167 NHARFDEPERVSFFMTPPSDEATARRALDDIREQRETEELRDQTRAILDRPVPS------ 220 Query: 236 YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNT 293 L F++ L K ++ G + + ++ ++A + T Sbjct: 221 --LADGFGQSFRDNLLKLPLQEWTLLQSKDGWHVVRLDARKPGALAKFEDIRAEAAKIWT 278 Query: 294 PTKIEKHEAEYVKKLRSNAIIHY 316 + K E V +L++N I Y Sbjct: 279 TEETRKQAWEAVNRLKANYTIRY 301 >gi|322706004|gb|EFY97586.1| hypothetical protein MAA_06811 [Metarhizium anisopliae ARSEF 23] Length = 794 Score = 37.0 bits (83), Expect = 3.7, Method: Composition-based stats. Identities = 26/287 (9%), Positives = 82/287 (28%), Gaps = 23/287 (8%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQEL-----------IVETLKKQEIEKSGIT 96 E I + + Q++ G+ K A + + + KQ + Sbjct: 261 NEKIHQSAVEMAKKMYARQQLGGDQPKDASGQASGASQPNQYMNLQDAAYKQAQARIAKL 320 Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---FM 153 D + F ++ + S + ++ + + ++ F Sbjct: 321 HDEYHQSREFQEYYGSEKASNPKHRFSMSRKWGRRGSHSEDDLDDRQQSEKIREQMSMFS 380 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 K ++ ++ + + + + I D E + Sbjct: 381 SKLSQVDKGKRDKDREALLAAAQRNVKAQLHGMDEKVYQETGRANPSLITDWEAKAQKAA 440 Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG-VEYIAI 272 + ++ SK G ++ + +++ ++ ++ + T++ E + + Sbjct: 441 QAQHEARTDDSKGKIDIGGGM-FMTQEEINAIASKKIQPVLDDINDKAETERERQEVLRM 499 Query: 273 CD-------KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312 + +++ + K K E+ + +K+ A Sbjct: 500 EEQARREQAEKEKARDRETKEIAKKDKEQEKQEEKAKKLQEKMDEKA 546 >gi|257892780|ref|ZP_05672433.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,231,408] gi|257829159|gb|EEV55766.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium 1,231,408] Length = 303 Score = 37.0 bits (83), Expect = 3.7, Method: Composition-based stats. Identities = 26/313 (8%), Positives = 87/313 (27%), Gaps = 44/313 (14%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + F+ + + + + + G I++ ++ + ++ Sbjct: 1 MKKKFLALAIVLGAGLLSGCTNAGEKTAVSYKGGTISEQEVMDSLKKMQG-------ADS 53 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 VQ+LI + + +K G + V+ + Q + G S + Q + + Sbjct: 54 TVQQLI---VYQVFEDKYGDDVSTKEVDSQYDQTKKQLGDSFDS-------QLKTAGYTE 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + + + ++ + ++ +N ++ Sbjct: 104 ETFKDSIKQSLAFQEGLKKHIKLTDEDLKTAWKTFHPEVE-----AQIIQVASENDAKDV 158 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF--QNLLKK 252 + + ++ GK ++ + P + K Sbjct: 159 KKAA----------DKGDDFSKLAKDKSTDTTTKEDGGKVKFDSTTTTVPTEVKEAAFKL 208 Query: 253 SQNNTTNPYVTQKG------VEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEK--HEAE 303 ++ + + + ++ G ++ K L T TK+ + + Sbjct: 209 KDGQVSDVITSTNTSTYATEYYVVKMVKNQNKGNDMDKYKKELKEIATDTKLSDSTFQNK 268 Query: 304 YVKKLRSNAIIHY 316 + ++ +A + Sbjct: 269 VIGEVLKDANVKI 281 >gi|254693848|ref|ZP_05155676.1| peptidyl-prolyl cis-trans isomerase D [Brucella abortus bv. 3 str. Tulya] gi|261214133|ref|ZP_05928414.1| rotamase [Brucella abortus bv. 3 str. Tulya] gi|260915740|gb|EEX82601.1| rotamase [Brucella abortus bv. 3 str. Tulya] Length = 628 Score = 37.0 bits (83), Expect = 3.7, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 63/263 (23%), Gaps = 12/263 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----I 56 M + ++ +I L +++ F I I M+ T ++ D Sbjct: 1 MLDSLRSAAQSWIAKLLLGLLVLSFAIWGISDVFRGGMAGNAALTAGDSEVSATDYRFAY 60 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +++ L Q + A + + Q + + + Q A + Sbjct: 61 EQQLMRLSQQFRQRLTREQAKAIGVENQVLAQLAAGVVLDEAARNMQLGLSQDAIARLTA 120 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + D ++N + +E + K+ + ++ Sbjct: 121 EDPAFHDAGGNFNRARFDAVLRQSGIRAEDYLENRAKVARRQQIVEAATDGMKLPDTMLK 180 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + D +E+ E K Y Sbjct: 181 ALALYQGESRSADYIDVPAEKADAIPAPSEDVLKAY------FEAHKEDYKAPEYRKISY 234 Query: 237 LLESDLHPQFQNLLKKSQNNTTN 259 + + +Q+ + Sbjct: 235 VKLE--PSDIADPAAVTQDEISE 255 >gi|256061222|ref|ZP_05451373.1| rotamase family protein [Brucella neotomae 5K33] gi|261325229|ref|ZP_05964426.1| rotamase [Brucella neotomae 5K33] gi|261301209|gb|EEY04706.1| rotamase [Brucella neotomae 5K33] Length = 628 Score = 37.0 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 63/263 (23%), Gaps = 12/263 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----I 56 M + ++ +I L +++ F I I M+ T ++ D Sbjct: 1 MLDSLRSAAQTWIAKLLLGLLVLSFAIWGISDVFRGGMAGNAALTAGDSEVSATDYRFAY 60 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +++ L Q + A + + Q + + + Q A + Sbjct: 61 EQQLMRLSQQFRQRLTREQAKAIGVENQVLAQLAAGVVLDEAARNMQLGLSQDAIARLTA 120 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + D ++N + +E + K+ + ++ Sbjct: 121 EDPAFHDAGGNFNRARFDAVLRQSGIRAEDYLENRAKVARRQQIVEAATDGMKLPDTMLK 180 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + D +E+ E K Y Sbjct: 181 ALALYQGESRSADYIDVPAEKADAIPAPSEDVLKAY------FEAHKEDYKAPEYRKISY 234 Query: 237 LLESDLHPQFQNLLKKSQNNTTN 259 + + +Q+ + Sbjct: 235 VKLE--PSDIADPAAVTQDEISE 255 >gi|225627608|ref|ZP_03785645.1| rotamase family protein [Brucella ceti str. Cudo] gi|256159868|ref|ZP_05457597.1| rotamase family protein [Brucella ceti M490/95/1] gi|256255110|ref|ZP_05460646.1| rotamase family protein [Brucella ceti B1/94] gi|260168841|ref|ZP_05755652.1| rotamase family protein [Brucella sp. F5/99] gi|261222305|ref|ZP_05936586.1| rotamase [Brucella ceti B1/94] gi|261758329|ref|ZP_06002038.1| peptidyl-prolyl cis-trans isomerase D [Brucella sp. F5/99] gi|265998269|ref|ZP_06110826.1| rotamase [Brucella ceti M490/95/1] gi|225617613|gb|EEH14658.1| rotamase family protein [Brucella ceti str. Cudo] gi|260920889|gb|EEX87542.1| rotamase [Brucella ceti B1/94] gi|261738313|gb|EEY26309.1| peptidyl-prolyl cis-trans isomerase D [Brucella sp. F5/99] gi|262552737|gb|EEZ08727.1| rotamase [Brucella ceti M490/95/1] Length = 628 Score = 37.0 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 63/263 (23%), Gaps = 12/263 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----I 56 M + ++ +I L +++ F I I M+ T ++ D Sbjct: 1 MLDSLRSAAQSWIAKLLLGLLVLSFAIWGISDVFRGGMAGNAALTAGDSEVSATDYRFAY 60 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +++ L Q + A + + Q + + + Q A + Sbjct: 61 EQQLMRLSQQFRQRLTREQAKAIGVENQVLAQLAAGVVLDEAARNMQLGLSQDAIARLTA 120 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + D ++N + +E + K+ + ++ Sbjct: 121 EDPAFHDAGGNFNRARFDAVLRQSGIRAEDYLENRAKVARRQQIVEAATDGMKLPDTMLK 180 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + D +E+ E K Y Sbjct: 181 ALALYQGESRSADYIDVPAEKADAIPAPSEDVLKAY------FEAHKEDYKAPEYRKISY 234 Query: 237 LLESDLHPQFQNLLKKSQNNTTN 259 + + +Q+ + Sbjct: 235 VKLE--PSDIADPAAVTQDEISE 255 >gi|148560591|ref|YP_001259060.1| rotamase family protein [Brucella ovis ATCC 25840] gi|148371848|gb|ABQ61827.1| rotamase family protein [Brucella ovis ATCC 25840] Length = 628 Score = 37.0 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 63/263 (23%), Gaps = 12/263 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----I 56 M + ++ +I L +++ F I I M+ T ++ D Sbjct: 1 MLDSLRSAAQSWIAKLLLGLLVLSFAIWGISDVFRGGMAGNAALTAGDSEVSATDYRFAY 60 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +++ L Q + A + + Q + + + Q A + Sbjct: 61 EQQLMRLSQQFRQRLTREQAKAIGVENQVLAQLAAGVVLDEAARNMQLGLSQDAIARLTA 120 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + D ++N + +E + K+ + ++ Sbjct: 121 EDPAFHDAGGNFNRARFDAVLRQSGIRAEDYLENRAKVARRQQIVEAATDGMKLPDTMLK 180 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + D +E+ E K Y Sbjct: 181 ALALYQGESRSADYIDVPAEKADAIPAPSEDVLKAY------FEAHKEDYKAPEYRKISY 234 Query: 237 LLESDLHPQFQNLLKKSQNNTTN 259 + + +Q+ + Sbjct: 235 VKLE--PSDIADPAAVTQDEISE 255 >gi|62290052|ref|YP_221845.1| rotamase family protein [Brucella abortus bv. 1 str. 9-941] gi|82699979|ref|YP_414553.1| peptidyl-prolyl cis-trans isomerase D [Brucella melitensis biovar Abortus 2308] gi|189024292|ref|YP_001935060.1| peptidyl-prolyl cis-trans isomerase D [Brucella abortus S19] gi|237815561|ref|ZP_04594558.1| rotamase family protein [Brucella abortus str. 2308 A] gi|254689364|ref|ZP_05152618.1| peptidyl-prolyl cis-trans isomerase D [Brucella abortus bv. 6 str. 870] gi|254697497|ref|ZP_05159325.1| peptidyl-prolyl cis-trans isomerase D [Brucella abortus bv. 2 str. 86/8/59] gi|254730394|ref|ZP_05188972.1| peptidyl-prolyl cis-trans isomerase D [Brucella abortus bv. 4 str. 292] gi|256257610|ref|ZP_05463146.1| peptidyl-prolyl cis-trans isomerase D [Brucella abortus bv. 9 str. C68] gi|260546604|ref|ZP_05822343.1| peptidyl-prolyl cis-trans isomerase D [Brucella abortus NCTC 8038] gi|260754881|ref|ZP_05867229.1| rotamase [Brucella abortus bv. 6 str. 870] gi|260758098|ref|ZP_05870446.1| rotamase [Brucella abortus bv. 4 str. 292] gi|260761922|ref|ZP_05874265.1| rotamase [Brucella abortus bv. 2 str. 86/8/59] gi|260883893|ref|ZP_05895507.1| rotamase [Brucella abortus bv. 9 str. C68] gi|297248452|ref|ZP_06932170.1| peptidyl-prolyl cis-trans isomerase D [Brucella abortus bv. 5 str. B3196] gi|62196184|gb|AAX74484.1| rotamase family protein [Brucella abortus bv. 1 str. 9-941] gi|82616080|emb|CAJ11118.1| peptidyl-prolyl cis-trans isomerase D [Brucella melitensis biovar Abortus 2308] gi|189019864|gb|ACD72586.1| peptidyl-prolyl cis-trans isomerase D [Brucella abortus S19] gi|237788859|gb|EEP63070.1| rotamase family protein [Brucella abortus str. 2308 A] gi|260095654|gb|EEW79531.1| peptidyl-prolyl cis-trans isomerase D [Brucella abortus NCTC 8038] gi|260668416|gb|EEX55356.1| rotamase [Brucella abortus bv. 4 str. 292] gi|260672354|gb|EEX59175.1| rotamase [Brucella abortus bv. 2 str. 86/8/59] gi|260674989|gb|EEX61810.1| rotamase [Brucella abortus bv. 6 str. 870] gi|260873421|gb|EEX80490.1| rotamase [Brucella abortus bv. 9 str. C68] gi|297175621|gb|EFH34968.1| peptidyl-prolyl cis-trans isomerase D [Brucella abortus bv. 5 str. B3196] Length = 628 Score = 37.0 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 63/263 (23%), Gaps = 12/263 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----I 56 M + ++ +I L +++ F I I M+ T ++ D Sbjct: 1 MLDSLRSAAQSWIAKLLLGLLVLSFAIWGISDVFRGGMAGNAALTAGDSEVSATDYRFAY 60 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +++ L Q + A + + Q + + + Q A + Sbjct: 61 EQQLMRLSQQFRQRLTREQAKAIGVENQVLAQLAAGVVLDEAARNMQLGLSQDAIARLTA 120 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + D ++N + +E + K+ + ++ Sbjct: 121 EDPAFHDAGGNFNRARFDAVLRQSGIRAEDYLENRAKVARRQQIVEAATDGMKLPDTMLK 180 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + D +E+ E K Y Sbjct: 181 ALALYQGESRSADYIDVPAEKADAIPAPSEDVLKAY------FEAHKEDYKAPEYRKISY 234 Query: 237 LLESDLHPQFQNLLKKSQNNTTN 259 + + +Q+ + Sbjct: 235 VKLE--PSDIADPAAVTQDEISE 255 >gi|17987128|ref|NP_539762.1| peptidyl-prolyl cis-trans isomerase D [Brucella melitensis bv. 1 str. 16M] gi|225852638|ref|YP_002732871.1| rotamase family protein [Brucella melitensis ATCC 23457] gi|256044795|ref|ZP_05447699.1| rotamase family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256113701|ref|ZP_05454505.1| rotamase family protein [Brucella melitensis bv. 3 str. Ether] gi|256263869|ref|ZP_05466401.1| peptidyl-prolyl cis-trans isomerase D [Brucella melitensis bv. 2 str. 63/9] gi|260565602|ref|ZP_05836086.1| peptidyl-prolyl cis-trans isomerase D [Brucella melitensis bv. 1 str. 16M] gi|265991219|ref|ZP_06103776.1| rotamase [Brucella melitensis bv. 1 str. Rev.1] gi|265995055|ref|ZP_06107612.1| rotamase [Brucella melitensis bv. 3 str. Ether] gi|17982791|gb|AAL52026.1| peptidyl-prolyl cis-trans isomerase d [Brucella melitensis bv. 1 str. 16M] gi|225641003|gb|ACO00917.1| rotamase family protein [Brucella melitensis ATCC 23457] gi|260151670|gb|EEW86764.1| peptidyl-prolyl cis-trans isomerase D [Brucella melitensis bv. 1 str. 16M] gi|262766168|gb|EEZ11957.1| rotamase [Brucella melitensis bv. 3 str. Ether] gi|263002003|gb|EEZ14578.1| rotamase [Brucella melitensis bv. 1 str. Rev.1] gi|263094000|gb|EEZ17934.1| peptidyl-prolyl cis-trans isomerase D [Brucella melitensis bv. 2 str. 63/9] gi|326409157|gb|ADZ66222.1| rotamase family protein [Brucella melitensis M28] gi|326538867|gb|ADZ87082.1| rotamase family protein [Brucella melitensis M5-90] Length = 628 Score = 37.0 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 63/263 (23%), Gaps = 12/263 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----I 56 M + ++ +I L +++ F I I M+ T ++ D Sbjct: 1 MLDSLRSAAQSWIAKLLLGLLVLSFAIWGISDVFRGGMAGNAALTAGDSEVSATDYRFAY 60 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +++ L Q + A + + Q + + + Q A + Sbjct: 61 EQQLMRLSQQFRQRLTREQAKAIGVENQVLAQLAAGVVLDEAARNMQLGLSQDAIARLTA 120 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + D ++N + +E + K+ + ++ Sbjct: 121 EDPAFHDAGGNFNRARFDAVLRQSGIRAEDYLENRAKVARRQQIVEAATDGMKLPDTMLK 180 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + D +E+ E K Y Sbjct: 181 ALALYQGESRSADYIDVPAEKADAIPAPSEDVLKAY------FEAHKEDYKAPEYRKISY 234 Query: 237 LLESDLHPQFQNLLKKSQNNTTN 259 + + +Q+ + Sbjct: 235 VKLE--PSDIADPAAVTQDEISE 255 >gi|241759320|ref|ZP_04757426.1| conserved hypothetical protein [Neisseria flavescens SK114] gi|241320456|gb|EER56753.1| conserved hypothetical protein [Neisseria flavescens SK114] Length = 254 Score = 37.0 bits (83), Expect = 3.9, Method: Composition-based stats. Identities = 21/225 (9%), Positives = 50/225 (22%), Gaps = 6/225 (2%) Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 E DS + D + + Sbjct: 25 APEIDPARIDSMVAEVLRQADQHPNQTAKPDGQAIRKDVVTRLQTLEILKNEAIKAGLDK 84 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIR-TVLFSIPDNKLQNQGFVQKRIKDAEE 207 + ++ N+E E AN+ F ++ V + Sbjct: 85 DAEVQNQFKNVEAEFYANQYAAYLERQTAVDDAELRRFYDQQTRIIKLQQVSFASAEEVR 144 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTT-NPYVTQK 265 + L E+ + + ++ L PQ ++ + T P Sbjct: 145 AAQELLLKGLSFEELMKRYPNPEQEFDGFISPQQLSPQLATAFADMNRGDVTHEPIQMGN 204 Query: 266 GVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + ++ ++ K+E +K+ Sbjct: 205 RFYLFKLSAVERNPNAEPFELVRNQIAQAVKRQKVENQIERILKE 249 >gi|88705926|ref|ZP_01103635.1| conserved hypothetical protein [Congregibacter litoralis KT71] gi|88699997|gb|EAQ97107.1| conserved hypothetical protein [Congregibacter litoralis KT71] Length = 266 Score = 37.0 bits (83), Expect = 3.9, Method: Composition-based stats. Identities = 27/271 (9%), Positives = 63/271 (23%), Gaps = 49/271 (18%) Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81 L F + + + ++ +R TT IT ++ + L+ Sbjct: 15 LFAFFAIGGLCFIAYTQLNREATT----PITLSQSAQAL-------------------LV 51 Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141 E D + + L E +S L L Q Sbjct: 52 AEWEMLTGKSAQAADVD-----AILNDYYQRELLYREGIASELHLSDASVRELIIELMQQ 106 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + ++ + I + ++ + Sbjct: 107 RVTGEIAEPSPKDLVNFYADNIERYYTEASISFSQKVF------------ASAPENPEAL 154 Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY 261 + + + + F + G P + L + PY Sbjct: 155 REQLNQGGGQAGAVPWQGSDFPDYGVSMVRGLFG-------QPLLEILQSLAFGEWQGPY 207 Query: 262 VTQKGVEYIAICDKRDLG--GEIALKAYLSA 290 +++G Y + +R ++ + A Sbjct: 208 ESRQGWHYFRVTARRAPQLLPFERVRDQVLA 238 >gi|262068174|ref|ZP_06027786.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium periodonticum ATCC 33693] gi|291378117|gb|EFE85635.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium periodonticum ATCC 33693] Length = 563 Score = 37.0 bits (83), Expect = 3.9, Method: Composition-based stats. Identities = 29/262 (11%), Positives = 68/262 (25%), Gaps = 8/262 (3%) Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 I L + N + ++ T + + + A+N Sbjct: 207 EMEIKDLAPEYENLIEKVAYEEDGFKITNLDLAKIMTTFMINQKATKEQAEELAKNMITK 266 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + +G+ N ++ + + + + E+ + K Sbjct: 267 QIKVAKMAKDKGVKVNEELDLMSQLQEYAVGLSEKVREEIKPTDAELESFFNSNKTRYNI 326 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 L + + + K + + L K + + + Sbjct: 327 SETADAKLVFLNVKSTKEDDELAKDKAEKLLAELTPENFTEKGKSLGNNQDVIY-QDLGT 385 Query: 237 LLESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294 + +F+ LK +N T+ G + K + + ++ P Sbjct: 386 FGTKAMVKEFEEALKDVPSNTIVNKVIKTKFGYHVAYV--KANDNNQQWSVEHILIVPYP 443 Query: 295 TKIEKHEAEYVKKLRS-NAIIH 315 EK E ++KL A I Sbjct: 444 --SEKTVTEKLEKLNKLKADIE 463 >gi|206890309|ref|YP_002248870.1| hypothetical protein THEYE_A1042 [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742247|gb|ACI21304.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 162 Score = 37.0 bits (83), Expect = 4.0, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 54/154 (35%), Gaps = 3/154 (1%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 ++ VL++ + +VS R+ ++ IT D K + +K +KI + Sbjct: 1 MVKFILVLVMLFNIVVVSSVFPETIDRVIAYVDSNAITLRDFEKVASKMK-EKIPQIKNE 59 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG--LSAEDFSSFLDKQGIGDN 132 ++ +I L ++ ++ I + +V +G + + ++ I Sbjct: 60 EILETMINRVLLLRKAKELFIEGKDEELINNYVDLKIKSGIIIPENKIREYYEENKIKFK 119 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 I + + +F K E+ N Sbjct: 120 DTPYIYIRDEIEKYLFEKEFNQKLKEYIEELRQN 153 >gi|224417810|ref|ZP_03655816.1| hypothetical protein HcanM9_00899 [Helicobacter canadensis MIT 98-5491] gi|253827151|ref|ZP_04870036.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313141352|ref|ZP_07803545.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253510557|gb|EES89216.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313130383|gb|EFR48000.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 489 Score = 37.0 bits (83), Expect = 4.0, Method: Composition-based stats. Identities = 30/326 (9%), Positives = 89/326 (27%), Gaps = 46/326 (14%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M S + + + + + ++ +S + ++ ++ + Sbjct: 1 MISFMQKHKKYLMITIWVSTIAFVGAGFVGWGSYDFSSTSNAVAVVGKTKVSINEMQREY 60 Query: 61 ALL-------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + L + Q +E+ A+ LI++ L G+ + Sbjct: 61 SRLYGIYNQLVGGTLDEEQAKKMGIEEQALNNLIIKALMLNYAYDLGLRASKEEIIQAIT 120 Query: 108 QH--ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 +N G E + ++ + +++ + + LE+E + Sbjct: 121 STESFQNNGQFDEQIYKRILQENQLKPKDFEESIKENLILQKLDALLDMPLTPLEIETLS 180 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 ++ + + ++ N V++ ++ ++ + +S Sbjct: 181 AAY-----SMEDLVHIQIIDKKTINVNPTNEEVKRYWEENKDIYQTERGY-----EISSV 230 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 + + Q + F+N S+ K Sbjct: 231 FIPLDSIEIQEASLESYYEDFKNQFLDSEGQVI---------------------PYEKAK 269 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSN 311 +S + + +K + LR N Sbjct: 270 EQVSEKYRDAQAQKEALKEYIALRKN 295 >gi|224373001|ref|YP_002607373.1| hypothetical protein NAMH_0972 [Nautilia profundicola AmH] gi|223589838|gb|ACM93574.1| conserved hypothetical protein [Nautilia profundicola AmH] Length = 478 Score = 37.0 bits (83), Expect = 4.0, Method: Composition-based stats. Identities = 37/325 (11%), Positives = 88/325 (27%), Gaps = 50/325 (15%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T + + + I + S I ++ D+ + Sbjct: 1 MIEWMQTHRKWLVITIWIATIAFIGAGFVGWGQFQFGRKSSTVAKIKDTEVSIQDVQEVY 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 L +K L+K A I + + +Q + G+ V + Sbjct: 61 NNLFQEKNKQLGGTLDDATAEKMGLKKQAFDMAIQQGILRQYAKDLGMYVTDEEVAKQVL 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 Q+ ++ +L + G F+ L Q + ++ + L++ + Sbjct: 121 QYFKDKKTYL----MYLKQTGQKAKDFEAKLRKQLLIQKLLTALHIKPSKTLQLTFASAL 176 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227 N+ ++ ++ ++ ++ + ++ + K K Sbjct: 177 YNSDNLEIK------IINKSSVKVNLSEDEIKAFWEKNKQKYQSPTMYKIAIVKTPIK-- 228 Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287 E+DL + +N DK ++ K Sbjct: 229 -------GVATENDLKAFYNENKTNYRN------------------DKGEILTYEEAKNQ 263 Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNA 312 + +K KKL+ A Sbjct: 264 VKKDYLAKISKKDAIIAYKKLKEGA 288 >gi|255012784|ref|ZP_05284910.1| two-component system sensor histidine kinase/response regulator, hybrid [Bacteroides sp. 2_1_7] Length = 887 Score = 37.0 bits (83), Expect = 4.1, Method: Composition-based stats. Identities = 16/233 (6%), Positives = 55/233 (23%), Gaps = 17/233 (7%) Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIR-------------TTINGEVITDGDISKRIALLKL 65 + ++ + IV S + IN I + ++K Sbjct: 5 FLLVWLTLIVLCGCTSSGKQKRHVIGLSQCMLDDAWREAMINDMRIEASNYDDMEIIIKD 64 Query: 66 QKINGELEKIAVQELIVET----LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121 + N E + +++LI + + + + ++ + ++ Sbjct: 65 AQNNNETQIQQIRDLIRQKVDVLIISPYQSEPITAVAEEAYRAGIPTIITDRKVNTDQYT 124 Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181 SF+ A + P+ + + + + R Sbjct: 125 SFVGANNYEIGLAAGNYAANYLPPNAIILEIWGLTQTSPAQERHKGFVDALREREDLSFR 184 Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 + + + + + + + ++ + Sbjct: 185 KIEGQWLVDTARMELRKLEHPEQIDFVYAHNDMMAIAAREYFMAWDSIRGRDL 237 >gi|284989497|ref|YP_003408051.1| hypothetical protein Gobs_0918 [Geodermatophilus obscurus DSM 43160] gi|284062742|gb|ADB73680.1| hypothetical protein Gobs_0918 [Geodermatophilus obscurus DSM 43160] Length = 343 Score = 37.0 bits (83), Expect = 4.1, Method: Composition-based stats. Identities = 28/311 (9%), Positives = 84/311 (27%), Gaps = 32/311 (10%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL--------LKL 65 + LT + + + + + + E +T G++ + Sbjct: 17 RRLTASLAVGLVALAGV---AGCRSDPGVAAYVGDERVTVGELRTAVDTRLEDPALAEAA 73 Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125 E ++ ++ L+ L + ++ G+T D V + G E + Sbjct: 74 AGREDEFTRLVLRRLVEAELYDRFAQRYGVTVDDGDVRARLDELLA--GEDPEAVYAQAA 131 Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185 QG+ + + Q + V ++ L E + + ++ + + V Sbjct: 132 SQGVARADVFETVRQQVLRQRVAESQ--GLVRGLSEEELRAAYEEQAPSLAQVRLGYVNV 189 Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245 +Q + ++ + + Sbjct: 190 PDQGAADAAVATLQADPGAYPAIAAQF-------------PGATTLPEVATRAPDQVPAP 236 Query: 246 FQNLLKKSQNNTTNPYVTQK--GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 +++ + N+ GV + + + + ++ L + + Sbjct: 237 LADVVVSAAPNSATSLTLPDLPGVLVVFV-GEPAVPSFEEVRPQLEESARGE-SDAAAQQ 294 Query: 304 YVKKLRSNAII 314 V +R+ + Sbjct: 295 LVADVRAGIDV 305 >gi|303236370|ref|ZP_07322960.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN] gi|302483428|gb|EFL46433.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN] Length = 415 Score = 37.0 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 32/286 (11%), Positives = 70/286 (24%), Gaps = 27/286 (9%) Query: 47 NGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 N EVI DI + L+ + + + +LI + S Sbjct: 57 NNEVI-RFDIQRTDELINGFDDSEYGKNEGLDKLIGGKKVDIIVGGPPCQAYSLAGRIRD 115 Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW---------PDVVKNDFMLKYG 157 +N + S + F + + + K+ Y Sbjct: 116 EHGMKNDYRNYLFESYIRIVKHFRPKFFVFENVVGLLSAAPDGYPIVEKIRKDFIASGYN 175 Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217 E + + ++ D ++ + + + Sbjct: 176 VAENFKDTLFEVADFGIPQHRRRVIIVGIRLDTFGNSEQEALSITNNMIDEFYNVLMPSY 235 Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT---TNPYVTQK-GVEYIAIC 273 K A + +IG P + + P+ +++ G Sbjct: 236 ---KKAKRTVKEAIGDL--------PPIYPLDESVKEGGKKFSHAPFSSERIGNHIPRFH 284 Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR-SNAII-HYY 317 KRD+ L + + + E ++ + I YY Sbjct: 285 SKRDIDVFKFLAEDIKSGRKEYVSTEKLKELYTQITGKKSNIHKYY 330 >gi|312142755|ref|YP_003994201.1| peptidil-prolyl cis-trans isomerase [Halanaerobium sp. 'sapolanicus'] gi|311903406|gb|ADQ13847.1| peptidil-prolyl cis-trans isomerase [Halanaerobium sp. 'sapolanicus'] Length = 251 Score = 37.0 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 35/85 (41%), Gaps = 15/85 (17%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWA---------------MSSRIRTTINGEVITDGDIS 57 +K + ++I IVP + + I +NGE ITD +++ Sbjct: 1 MKKILVSLLIITVLIVPTSVFAQEMDMTPEEPVDSSIEEDIGGNIVAEVNGEEITDQELA 60 Query: 58 KRIALLKLQKINGELEKIAVQELIV 82 ++ + +L + ++++ Q L+ Sbjct: 61 QQANVNQLLQEIAQIDQQLAQVLVD 85 >gi|149183221|ref|ZP_01861666.1| YacD [Bacillus sp. SG-1] gi|148849054|gb|EDL63259.1| YacD [Bacillus sp. SG-1] Length = 123 Score = 37.0 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 36/124 (29%), Gaps = 13/124 (10%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPI-----VSYKSWAMSSRIRTTINGEVITDGD 55 M +KV S I L+ + ++ + + T+ GE I+ Sbjct: 1 MDTKVRLKRSVLISLVFILLGANVVTLIYFTKAEAGPGLAELAGAETAATVGGETISRES 60 Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 + K ++ELI + + Q EK I ++ Sbjct: 61 WMFEM--------EKRYGKEVLRELINQKVMIQLAEKYDIKVTDEELDKEVALIKSVYSS 112 Query: 116 SAED 119 +D Sbjct: 113 YDKD 116 >gi|220930557|ref|YP_002507466.1| peptidase S8/S53 subtilisin kexin sedolisin [Clostridium cellulolyticum H10] gi|220000885|gb|ACL77486.1| peptidase S8 and S53 subtilisin kexin sedolisin [Clostridium cellulolyticum H10] Length = 632 Score = 37.0 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 71/222 (31%), Gaps = 3/222 (1%) Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 +S F K L F+LI + P+ SY A + ++ IT I K + +KL K Sbjct: 1 MSGFKKFLVIPFILIFLAVYPLTSYVESAETDSAPYSL--TEITKLQIIKEVNGVKLAKA 58 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + +I + +E K + S+++ Sbjct: 59 IFN-NQDIKDIVIFKDGSIEEYSKEKHGKLFEKDKLSKKLKEKIKKSSSDEEIPVAVHIN 117 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 D++ + + +K++ K E ++ + +++ + Sbjct: 118 DIDHNEVEKYVKDKLKIKDIKDEKPEKIKEYIKEKRIKSKEEYKKSNSQFVKEYINNEEE 177 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230 + Q + R+ + + +L +++ F + Sbjct: 178 LFESQYSPLIIIRLTNMDIEKLSKNMQVQEMDLFVDSTKEED 219 >gi|153854680|ref|ZP_01995930.1| hypothetical protein DORLON_01928 [Dorea longicatena DSM 13814] gi|149752784|gb|EDM62715.1| hypothetical protein DORLON_01928 [Dorea longicatena DSM 13814] Length = 347 Score = 37.0 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 22/297 (7%), Positives = 65/297 (21%), Gaps = 30/297 (10%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---- 68 +K L ++ + E IT G + + Q Sbjct: 1 MKKRALILALAGIMAASLIG-CGSRKDDAVVVKAGDEEITAGVANFYARYTQAQYETYFA 59 Query: 69 -------------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109 +++ + +L L ++ ++ + Sbjct: 60 SYLGGDDMWSRNASDGKTYEESIKETLLDDLKNMALLEEHMKDYDVKLTKADKKAINDAA 119 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 +++ + +AI+ + D +K + E + Sbjct: 120 KEFDKANSQKKKDKVSGSKENVKRVMTLMAIEQKMRAAIVADANVKVTDEEATQKHMQYV 179 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 + ++ + ++ + + + + ++ + A Sbjct: 180 EFDYSITSDSSSSSDTTVSEAEKKKNKETAEAFAKGAKTAEDFAAYATEQGTEAKDATFD 239 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286 S S + K + TT+ + D K Sbjct: 240 S------DSVSPSKEVVKAADKLGEGETTDVIEGDTACYVAKVTSLNDKTATETKKQ 290 >gi|328778695|ref|XP_001121287.2| PREDICTED: protein I'm not dead yet-like [Apis mellifera] Length = 535 Score = 36.6 bits (82), Expect = 4.4, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 6/94 (6%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN--GEVITDGDISKRIALLKLQKINGEL 72 ++ F+ I+ + + Y + TI GE IT+ I +R L Sbjct: 230 MIVNSFLTWIYLRIAFMGYLRPESKDAVAATIGAEGEAITNEVIDQRYKELG----KMSF 285 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106 +++V L V + K G Sbjct: 286 HELSVAILFVICVILWLFRKPGFVVGWAEYLTQI 319 >gi|312876281|ref|ZP_07736267.1| conserved hypothetical protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796927|gb|EFR13270.1| conserved hypothetical protein [Caldicellulosiruptor lactoaceticus 6A] Length = 230 Score = 36.6 bits (82), Expect = 4.4, Method: Composition-based stats. Identities = 24/202 (11%), Positives = 56/202 (27%), Gaps = 28/202 (13%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 I + + VLI +V + + +NG I D+ +L +L Sbjct: 1 MKRSKILIAGICSLAVLIGIVVVGWSLASKKELPKDVVAVVNGHKIYKKDLDMAYSLEEL 60 Query: 66 QKIN-------------------------GELEKIAVQELIVETLKKQEIEKSGITFDSN 100 + N + + + E+I + E +K G + Sbjct: 61 RYENAKVSFEELKKKYGADAAKELEGSLRKKTRQEILDEMIEWLVLYDEAKKEGCEVSLD 120 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 ++ + + D S + + L + + + E Sbjct: 121 EAKAYYNKTQKMIQDVLSDKLSTGEMN---NTQRAIELINSFVKKQGISEKEHEEMVIKE 177 Query: 161 MEIPANKQKMKNITVREYLIRT 182 ++ + QK ++Y + Sbjct: 178 CQMLLSIQKYLQEKEKQYKNKH 199 >gi|312792332|ref|YP_004025255.1| hypothetical protein Calkr_0065 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179472|gb|ADQ39642.1| hypothetical protein Calkr_0065 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 230 Score = 36.6 bits (82), Expect = 4.5, Method: Composition-based stats. Identities = 23/202 (11%), Positives = 54/202 (26%), Gaps = 28/202 (13%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65 I + + VLI V + + +NG I D+ +L +L Sbjct: 1 MKRSKILIAGICSLAVLIGIVAVGWSLASKKELPKDVVAVVNGHKIYKKDLDMAYSLEEL 60 Query: 66 QKIN-------------------------GELEKIAVQELIVETLKKQEIEKSGITFDSN 100 + N + + + E+I + E +K G + Sbjct: 61 RYENAKVSFEELKKKYGADVAKELEGSLRKKTRQEILDEMIEWLVLYDEAKKEGCEVSLD 120 Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 ++ + + S + + L + + + E Sbjct: 121 EAKAYYNKTQKMIQDVLSGKLSTGEMN---NTQRAIELINSFVKKQGISEKEHEEMVIKE 177 Query: 161 MEIPANKQKMKNITVREYLIRT 182 ++ + QK ++Y + Sbjct: 178 CQMLLSIQKYLQEKEKQYKNKH 199 >gi|294852479|ref|ZP_06793152.1| peptidyl-prolyl cis-trans isomerase D [Brucella sp. NVSL 07-0026] gi|294821068|gb|EFG38067.1| peptidyl-prolyl cis-trans isomerase D [Brucella sp. NVSL 07-0026] Length = 628 Score = 36.6 bits (82), Expect = 4.7, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 63/263 (23%), Gaps = 12/263 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----I 56 M + ++ +I L +++ F I I M+ T ++ D Sbjct: 1 MLDSLRSAAQSWIAKLLLGLLVLSFAIWGISDVFRGGMAGNAALTAGDSEVSATDYRFAY 60 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +++ L Q + A + + Q + + + Q A + Sbjct: 61 EQQLMRLSQQFRQRLTREQAKAIGVENQVLAQLAAGVVLDEAARNMQLGLSQDAIARLTA 120 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + D ++N + +E + K+ + ++ Sbjct: 121 EDPAFHDAGGNFNRARFDAVLRQSSIRAEDYLENRAKVARRQQIVEAATDGMKLPDTMLK 180 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + D +E+ E K Y Sbjct: 181 ALALYQGESRSADYIDVPAKKADAIPAPSEDVLKAY------FEAHKEDYKAPEYRKISY 234 Query: 237 LLESDLHPQFQNLLKKSQNNTTN 259 + + +Q+ + Sbjct: 235 VKLE--PSDIADPAAVTQDEISE 255 >gi|169350365|ref|ZP_02867303.1| hypothetical protein CLOSPI_01132 [Clostridium spiroforme DSM 1552] gi|169293148|gb|EDS75281.1| hypothetical protein CLOSPI_01132 [Clostridium spiroforme DSM 1552] Length = 331 Score = 36.6 bits (82), Expect = 4.7, Method: Composition-based stats. Identities = 18/270 (6%), Positives = 67/270 (24%), Gaps = 24/270 (8%) Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSR-IRTTIN----GEVITDGDISKRIALLKLQKINGE 71 T V+ F + + + + + +++ + I DI I + Sbjct: 7 ATALVVTSFLLTGCSNSNTVKEDGKYVVASLSKGKSDKNIFADDIFADI--TNTNRGKSA 64 Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131 + +Q+L+ + D + + + + Q Sbjct: 65 YFEAILQKLMDDKF----------PTDKDMEIDASRTVEQIQTYYEAQYGDQAEDQIKTV 114 Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 Y + +V+ + ++ ++ T +++ + Sbjct: 115 LASSGYSTLDEYEKAMVQAYQKSNFLLDYVKNNFDEVFDDYYTYATPRFASIIKVSIADS 174 Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYL------LESDLHP 244 +I+ + +++ V+ G + + Sbjct: 175 ENPTQEETAKIEQISTALASGTSFGEVATQYSDDSTTKVNKGGLGVVDTTSGLSSTYGSE 234 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274 + + + + G ++++ Sbjct: 235 VESKIFELNAGEVSEAISGTDGYYFVSVTS 264 >gi|91761956|ref|ZP_01263921.1| hypothetical SurA-like protein [Candidatus Pelagibacter ubique HTCC1002] gi|91717758|gb|EAS84408.1| hypothetical SurA-like protein [Candidatus Pelagibacter ubique HTCC1002] Length = 473 Score = 36.6 bits (82), Expect = 4.7, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 88/309 (28%), Gaps = 22/309 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + I L FV+I+ + IN I+ D + Sbjct: 1 MINPFKNFSKKKIGGLLLIFVIIVAFGFGGFGGGFSTGNQNNIAKINNTNISTQDFMDYL 60 Query: 61 ALLKLQKI------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 L + + + + + L+ TL EIE+ ++ + + + Sbjct: 61 NESGLSQQVIKENIDKNIIEELLSTLVSTTLLDLEIEELNLSITEDVLIRKIKNNKNFHD 120 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 + + +K + +N I+ ++ K F G + + K Sbjct: 121 ENGLFQRTLYEKFLLTNNSSAAMFEIRLKNNELQKQLFTYISGGTKSPEFLINKFYKENN 180 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 + + L + +K + + + + ++ KL++ V I Sbjct: 181 KKLDIEYIDLSTFY---------KKKEMFTDNDIKFFVEENAEKLKQDYIDFSFVEISPK 231 Query: 235 QYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI----ALKAYLSA 290 L D + F + + +N + + + D K + Sbjct: 232 NLLGIDDFNQAFFDKIDDIENQISKNIDFKT---IVKNLDISPTEVNSYINLDNKKIIEN 288 Query: 291 QNTPTKIEK 299 ++ +K Sbjct: 289 MIYNSREDK 297 >gi|71083623|ref|YP_266342.1| SurA-like protein [Candidatus Pelagibacter ubique HTCC1062] gi|71062736|gb|AAZ21739.1| hypothetical SurA-like protein [Candidatus Pelagibacter ubique HTCC1062] Length = 473 Score = 36.6 bits (82), Expect = 4.8, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 88/309 (28%), Gaps = 22/309 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + I L FV+I+ + IN I+ D + Sbjct: 1 MINPFKNFSKKKIGGLLLIFVIIVAFGFGGFGGGFSTGNQNNIAKINNTNISTQDFMDYL 60 Query: 61 ALLKLQKI------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 L + + + + + L+ TL EIE+ ++ + + + Sbjct: 61 NESGLSQQVIKENIDKNIIEELLSTLVSTTLLDLEIEELNLSITEDVLIRKIKNNKNFHD 120 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 + + +K + +N I+ ++ K F G + + K Sbjct: 121 ENGLFQRTLYEKFLLTNNSSAAMFEIRLKNNELQKQLFTYISGGTKSPEFLINKFYKENN 180 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234 + + L + +K + + + + ++ KL++ V I Sbjct: 181 KKLDIEYIDLSTFY---------KKKEMFTDNDIKFFVEENAEKLKQDYIDFSFVEISPK 231 Query: 235 QYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI----ALKAYLSA 290 L D + F + + +N + + + D K + Sbjct: 232 NLLGIDDFNQAFFDKIDDIENQISKNIDFKT---IVKNLDISPTEVNSYINLDNKKIIEN 288 Query: 291 QNTPTKIEK 299 ++ +K Sbjct: 289 MIYNSREDK 297 >gi|326795819|ref|YP_004313639.1| hypothetical protein Marme_2571 [Marinomonas mediterranea MMB-1] gi|326546583|gb|ADZ91803.1| hypothetical protein Marme_2571 [Marinomonas mediterranea MMB-1] Length = 615 Score = 36.6 bits (82), Expect = 4.8, Method: Composition-based stats. Identities = 6/53 (11%), Positives = 24/53 (45%), Gaps = 4/53 (7%) Query: 3 SKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD 55 V T+++ ++ + + I F ++ A++ + +++ ++T+ Sbjct: 6 HNVMTAMTKHLQQTVAFILFIAFLLLT----PITALADSVVASVDRNIVTENQ 54 >gi|317133521|ref|YP_004092835.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ethanoligenens harbinense YUAN-3] gi|315471500|gb|ADU28104.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ethanoligenens harbinense YUAN-3] Length = 338 Score = 36.6 bits (82), Expect = 4.9, Method: Composition-based stats. Identities = 17/250 (6%), Positives = 54/250 (21%), Gaps = 27/250 (10%) Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 A + L + ++ +N G++ L Sbjct: 100 AAESLCTQKKITLAADEKSQVTSYAQNMMSSYTVLKNNGIAEASMKRVLAYN-------- 151 Query: 136 QYLAIQSIWPDVVKNDFML--KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193 Q + + ++ + + ++ K + + + Sbjct: 152 -----QYLKDKLFQSYYGTGGSEAVSDADLKDYYTKNFVQIKQIFFSTQDDSGNALSTTD 206 Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL--LESDLHPQFQNLLK 251 Q +K + ++ S Y+ D F++ Sbjct: 207 QQAKKKKADNIFGQINADRSNFTALMDANNEDPGMQSSPD-GYVFGKSEDFVQVFKDTAF 265 Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR-- 309 + + G + + + + + + + + Sbjct: 266 SMKVGDVKLIQSSLGYHILY-----KVALDPNKFDSVKSDVLTDMKNPAFLKMLDNYKGI 320 Query: 310 --SNAIIHYY 317 +N+ I Y Sbjct: 321 TVNNSTISRY 330 >gi|261380077|ref|ZP_05984650.1| conserved hypothetical protein [Neisseria subflava NJ9703] gi|284797293|gb|EFC52640.1| conserved hypothetical protein [Neisseria subflava NJ9703] Length = 254 Score = 36.6 bits (82), Expect = 4.9, Method: Composition-based stats. Identities = 22/225 (9%), Positives = 51/225 (22%), Gaps = 6/225 (2%) Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148 E DS + D + + Sbjct: 25 APEIDPARIDSMVAEVLRQADQHPNQTAKPDGQAIRKDVVTRLQTLEVLKNEAIKAGLDK 84 Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIR-TVLFSIPDNKLQNQGFVQKRIKDAEE 207 + ++ N+E E AN+ F ++ V D Sbjct: 85 DAEVQNQFKNVEAEFYANQYAAYLERQTAVDDAELRRFYDQQTRIIKLQQVNFASADEVR 144 Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTT-NPYVTQK 265 + L E+ + + ++ L PQ ++ + T P + Sbjct: 145 AAQELLLKGLSFEELMKRYPNPEQEFDGFISPQQLSPQLATAFADMNRGDVTHEPIQMEN 204 Query: 266 GVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + ++ ++ K+E +K+ Sbjct: 205 RFYLFKLSAVERDPNAEPFELVRNQIAQAVKRQKVENQIKRILKE 249 >gi|328863809|gb|EGG12908.1| hypothetical protein MELLADRAFT_58819 [Melampsora larici-populina 98AG31] Length = 1803 Score = 36.6 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 30/273 (10%), Positives = 81/273 (29%), Gaps = 26/273 (9%) Query: 49 EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 E+IT D+ K ++ + + + + + + Sbjct: 1281 ELITQLDL-------KSLNFYQDISQQIGSTMNEISELIKSEIRREVLESKENEIQELRN 1333 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 L + + K+ + + + + K E+EI ++ Sbjct: 1334 VKNELELGLLKARADHGRVRSERAVEKEKIMEEKSKVERELEELRKKKRMDELEIERFRK 1393 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + + + S+ + + + V + E ++ + K Sbjct: 1394 EKEEMEGSRRVQGVEKESVERERDRLKELVARLESRCEGFEVKGREWETK---------- 1443 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 Q ++L + + + +++N ++Q G E + DL + L Sbjct: 1444 ---RILQTEEIAELKVKNRMIESNNKSNERGLELSQNGYERLQEVRNLDLIRYQTKEDEL 1500 Query: 289 SAQNTPTKIE--KHEAEYVKKLRS----NAIIH 315 + +IE K E +++R A++ Sbjct: 1501 RKEIRNQEIEFGKRYQEMGREIREAVEGKALVE 1533 >gi|291459856|ref|ZP_06599246.1| putative PPIC-type PPIASE domain protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291417646|gb|EFE91365.1| putative PPIC-type PPIASE domain protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 342 Score = 36.6 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 10/109 (9%), Positives = 21/109 (19%), Gaps = 4/109 (3%) Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258 + K E +F+ + + +Q + Sbjct: 196 ESAKKLHESVTASGANFSYFARQFSEDPEI----DRTLYRKEEEDAYYQAAFSLEDGQIS 251 Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + I D D K L + Y ++ Sbjct: 252 DVISQDGKFYIIKCVDSYDEKATEERKKRLEEAIRSGAFRRSYDSYAEQ 300 >gi|163868048|ref|YP_001609252.1| peptidyl-prolyl cis-trans isomerase D [Bartonella tribocorum CIP 105476] gi|161017699|emb|CAK01257.1| peptidyl-prolyl cis-trans isomerase D [Bartonella tribocorum CIP 105476] Length = 628 Score = 36.6 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 20/230 (8%), Positives = 59/230 (25%), Gaps = 17/230 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + ++ + +I + +L+ F ++ + S R T +IT D + Sbjct: 1 MLDVIRSAANSWIFRIFLAILLLCFILL-WGIPQLHTKSERDLITSGKSIITIDDYRLAL 59 Query: 61 A---------------LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 A + ++ +L L ++ K I+ +T+ + Sbjct: 60 ADQSARLAQAAHLGRMFTPNEMQQYQIPAFVFNQLQQNVLLDEQARKMKISLSKDTIAHT 119 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + ++ + + +++ Sbjct: 120 IGSD-KMFQINGTFNKDLFYNYLQHLRIGESAFLNYYTKQEKRNQLIAALLSDMKAPNLF 178 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 K + ++ ++ + +S R P+ Sbjct: 179 YKALALYQEEKRSADYLIIDLKEQTIADPDHETLQKWFETHQSEFRAPEY 228 >gi|308184755|ref|YP_003928888.1| putative pedidyl-prolyl cis-trans ismerase D(PPIase D) (Rotamase D) [Helicobacter pylori SJM180] gi|308060675|gb|ADO02571.1| putative pedidyl-prolyl cis-trans ismerase D(PPIase D) (Rotamase D) [Helicobacter pylori SJM180] Length = 487 Score = 36.6 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 90/317 (28%), Gaps = 21/317 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK + +EL + +K +EKS DS A + GL A Sbjct: 61 RRLKDAYAESIPD---FKELTEDQIKAMHLEKSA--LDSLINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVEKLLILQKISALFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPNDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKTDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EK-HEAEYVKKLRSNAI 313 + Y+ ++NA Sbjct: 284 NEKALRSYIALKKANAQ 300 >gi|225621111|ref|YP_002722369.1| hypothetical protein BHWA1_02207 [Brachyspira hyodysenteriae WA1] gi|225215931|gb|ACN84665.1| hypothetical protein BHWA1_02207 [Brachyspira hyodysenteriae WA1] Length = 491 Score = 36.6 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 39/331 (11%), Positives = 85/331 (25%), Gaps = 43/331 (12%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD----------GDISKRIALLKLQKING 70 V I+ I +V + + ++NG+ I I L +Q N Sbjct: 27 VSILLIIYFLVVDTRGSQKTPTIGSVNGKPIYYTSTSPYGRAFRQIEGYYQQLGIQINNE 86 Query: 71 E---LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED-FSSFLDK 126 +E +A + + L K+ D+ V Q G+ + + SF+ Sbjct: 87 MYTYIEDLAFRRAVSTMLLNDVARKNINVSDNFVVEAMKSQFIDTNGVYNQMAYESFIKN 146 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT---- 182 + + + I V + ++E+ +K E + Sbjct: 147 SSQSEKVKIEKDLKEDILSQTVSAELFTSVKLNDLEMQREYKKNLTKRDIEMVYINASEI 206 Query: 183 ---------VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-------SKI 226 L + N + + + + K Sbjct: 207 VQSNQVADADLEKYFTDNKTNFAQADISWIITQSGGVADNLYKSLKADISLFEKTAMEKS 266 Query: 227 HDVSIGKAQYLLESDLHPQ------FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280 D + K YL + + F N +N P + + D R Sbjct: 267 FDTNNYKLGYLTRMQMPNEDFANKIFANNNNTKGSNLLQPIYANGYYYIVLVNDIRIPEK 326 Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 + + + + ++ ++ Sbjct: 327 YTDVNKEV---LRREYLNANMNTLLEAEKTK 354 >gi|189462485|ref|ZP_03011270.1| hypothetical protein BACCOP_03174 [Bacteroides coprocola DSM 17136] gi|189430646|gb|EDU99630.1| hypothetical protein BACCOP_03174 [Bacteroides coprocola DSM 17136] Length = 711 Score = 36.6 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 23/78 (29%), Gaps = 2/78 (2%) Query: 237 LLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296 + + K N + P GV I + ++ + K Sbjct: 628 VTRASEPAISAYASKTELNKVSAPIKGNAGVYMIQVYNQEKSTEKFDAKKE--ETALSNM 685 Query: 297 IEKHEAEYVKKLRSNAII 314 ++ + + +LR A I Sbjct: 686 AARYAGQCIYELRDKAEI 703 >gi|317499344|ref|ZP_07957614.1| hypothetical protein HMPREF0996_02598 [Lachnospiraceae bacterium 5_1_63FAA] gi|316893379|gb|EFV15591.1| hypothetical protein HMPREF0996_02598 [Lachnospiraceae bacterium 5_1_63FAA] Length = 369 Score = 36.6 bits (82), Expect = 5.1, Method: Composition-based stats. Identities = 26/238 (10%), Positives = 64/238 (26%), Gaps = 3/238 (1%) Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN-TGLSAEDFSSFLDK 126 +++ +I + + + + ++ Q + T + + + K Sbjct: 81 KKITMQQSVKDSVINQLKQIKVLAAHADDYNVKLTKSEKKQIKESVTAFAKDSTGKKVMK 140 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + D Q L +S V + K + A K+ + + Sbjct: 141 KTEADKDMIQKLYEESTIASKVMQAIIKKANVTVTDDEAKTVKVYKLVFTTKTTDSKTGK 200 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 D + K+ K A + + + +KF+ + Sbjct: 201 EKDMTAAEKKDQLKKAKSALKMIKKGQSISSVAKKFSVNSDNEESYTKGKATLGT--KFE 258 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 K +N + I + + D + K+ L + EK ++ Sbjct: 259 TAAAKLKKNQVSGVVELDDAYVIIKMLNPNDTTAAASNKSTLLQEKQQAAYEKVYKKW 316 >gi|257467204|ref|ZP_05631515.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium gonidiaformans ATCC 25563] gi|315918334|ref|ZP_07914574.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] gi|313692209|gb|EFS29044.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] Length = 549 Score = 36.6 bits (82), Expect = 5.1, Method: Composition-based stats. Identities = 22/173 (12%), Positives = 55/173 (31%), Gaps = 5/173 (2%) Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS-IPDNKLQNQGFVQKRI 202 + + E+E+ Q N + I + ++ ++K+ Sbjct: 272 YGKAFFEKLKSEVKIDEVELSRFFQANHNRYNQHASIDVDVAVLKIVPSKEDIAAIEKKA 331 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP-- 260 ++ +S + + V + + + + +F+ S+ P Sbjct: 332 EETLKSLKKENFAKIGADLQKKSPETVIYEELGWFEKGAMVKEFEEAAFSSKEAQIYPKV 391 Query: 261 YVTQKGVEYIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 TQ G + I + ++ + A L +++Q + K K +KL Sbjct: 392 ISTQFGKHLLYIQEVQENKVKAAHILFREVASQASIDKSLKEAESIKEKLDKK 444 >gi|149701546|ref|XP_001497011.1| PREDICTED: multimerin 1 [Equus caballus] Length = 1221 Score = 36.6 bits (82), Expect = 5.1, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 62/192 (32%), Gaps = 13/192 (6%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE-- 89 + + + + +NG I ++SKR LL+ + A+ I E + E Sbjct: 663 AAATSKKVENMISVVNGLNILIKELSKRHNLLR---NEVQSRGDALDRRINEYALEMEDG 719 Query: 90 ----IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA----IQ 141 + D NY + + E Q+ IQ Sbjct: 720 LNKTMTIINNAIDFIQDNYMLKETLSTIKYNPEVHHKCTQNMETILTFIPQFQRLNDSIQ 779 Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201 + D + +F+L+ + +I +++ ++ + + S QN ++++ Sbjct: 780 ILVNDDQRYNFVLQVAKVLADISKDEKLNQSNFQKISQMFNESTSQVIKYQQNMSHLEEK 839 Query: 202 IKDAEESRLRLP 213 I A + Sbjct: 840 ILSATKISKNFE 851 >gi|291548689|emb|CBL24951.1| SpoIID/LytB domain [Ruminococcus torques L2-14] Length = 299 Score = 36.6 bits (82), Expect = 5.2, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 50/213 (23%), Gaps = 9/213 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--K 58 M + + F L F+L V I + + ++ I G+ Sbjct: 1 MRDTIRNKIKLFFAFLIILFLLPYIISVFINGKNAVQGADSDNASVYLAGILAGETDGGY 60 Query: 59 RIALLKLQK---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG- 114 I LK Q ++ I++ Q K Q A+ T Sbjct: 61 EIEALKAQAVVLRTELYRTEKEKQTILDKCLTQTQMKKKWGPKYEENLKKCQQAAQETKG 120 Query: 115 ---LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 E F+ Q + + + E EI + + K Sbjct: 121 IVLWYHETFAWAPFHQSSNGKTRDVQEVLGNADYPYITAKECPLDKAAEDEIQVHLIEYK 180 Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204 I R + + D Sbjct: 181 EIQKRCREFLVAEEQKKAENGYGYEDFEIQEWD 213 >gi|116252238|ref|YP_768076.1| peptidyl-prolyl cis-trans isomerase D [Rhizobium leguminosarum bv. viciae 3841] gi|115256886|emb|CAK07980.1| putative peptidyl-prolyl cis-trans isomerase D [Rhizobium leguminosarum bv. viciae 3841] Length = 630 Score = 36.6 bits (82), Expect = 5.2, Method: Composition-based stats. Identities = 24/396 (6%), Positives = 77/396 (19%), Gaps = 86/396 (21%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI--------T 52 M + + ++ L ++ F + + +S T+ + + Sbjct: 1 MFHILRRAAQTWVAKLLLLLLVASFGVWGVSHELLSGGNSTTVVTVGDQHVDVNEFHLAY 60 Query: 53 DGDISKRIALLKLQKINGELE-----KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 ++ + + + + +L+ Q E + + + Sbjct: 61 QRQVANLSQQFGTRLTPEQARAFGVEQQVLAQLVAGASLDQLAEDMNLGLSEDRLAQLIA 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM-------------- 153 ++ + + + V Sbjct: 121 DDPAFKAVNGRFDRELFISRLQNAGIRQDDYIKERSKVAVRSQVVDAISNGFTAPKTLVD 180 Query: 154 ----------------------LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191 ++ A + R R +++ Sbjct: 181 ALKLYGDESRSVEYLLLTNANIEPIKAPADDVLATWFEGVKQRYRAPEYRKLVYLKLQPG 240 Query: 192 LQNQGFV--------------------QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231 + R + + + + D + Sbjct: 241 DIADAATVTDDQIHEAFDKSKDTYRTPESRTIEQLTFASKDLAAAAETALKSGTSFDQLV 300 Query: 232 GKAQYLLESDLHPQFQNLLKKSQ------------NNTTNPYVTQKGVEYIAICDKR--D 277 L +F Q TT G + + + + Sbjct: 301 SDQGKTASDVLLGEFTEDKVPDQAVADAAFAVSRDGGTTPVVDGSFGPVILRVTNIKSET 360 Query: 278 LGGEIALKAYLSAQN-TPTKIEKHEA--EYVKKLRS 310 +K + Q ++ + ++ LR+ Sbjct: 361 AKNFDEVKEDIRKQLALSNASQEVINVHDRIEDLRA 396 >gi|257453206|ref|ZP_05618505.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. 3_1_5R] gi|317059740|ref|ZP_07924225.1| predicted protein [Fusobacterium sp. 3_1_5R] gi|313685416|gb|EFS22251.1| predicted protein [Fusobacterium sp. 3_1_5R] Length = 549 Score = 36.6 bits (82), Expect = 5.3, Method: Composition-based stats. Identities = 22/173 (12%), Positives = 55/173 (31%), Gaps = 5/173 (2%) Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS-IPDNKLQNQGFVQKRI 202 + + E+E+ Q N + I + ++ ++K+ Sbjct: 272 YGKAFFEKLKSEVKIDEVELSRFFQANHNRYNQHASIDVDVAVLKIVPSKEDIAAIEKKA 331 Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP-- 260 ++ +S + + V + + + + +F+ S+ P Sbjct: 332 EETLKSLKKENFAKIGADLQKKSPETVIYEELGWFEKGAMVKEFEEAAFSSKEAQIYPKV 391 Query: 261 YVTQKGVEYIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 TQ G + I + ++ + A L +++Q + K K +KL Sbjct: 392 ISTQFGKHLLYIQEVQENKVKAAHILFREVASQASIDKSLKEAESIKEKLDKK 444 >gi|241896492|ref|ZP_04783788.1| peptidylprolyl isomerase [Weissella paramesenteroides ATCC 33313] gi|241870214|gb|EER73965.1| peptidylprolyl isomerase [Weissella paramesenteroides ATCC 33313] Length = 353 Score = 36.6 bits (82), Expect = 5.3, Method: Composition-based stats. Identities = 25/294 (8%), Positives = 76/294 (25%), Gaps = 39/294 (13%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75 + + ++ I V +W + + T + ++ + K++ + Sbjct: 1 MWKKVLGVLVVIAAGVGLAAWGIGPKSLVTTDAGNVSQAEYYKKLKSSPEGQKE------ 54 Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135 + +I++ + ++ + + S + + + Sbjct: 55 -LANMIIQKVLDKKYGDKVSKKSIE----------SQYNDAKSQYGSQFSQVLSQNGMTE 103 Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195 + K + K + +EY + + I + + Sbjct: 104 DSFRDSLRIQALEKQAVIAD--------KHYSNKQLHKAYKEYQPKVSVSVILTSSEDDA 155 Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLH---PQFQNLLK 251 + + ++ + + + GK +D + K Sbjct: 156 KKI-------IAQLDKGGDFAKLAKEKSIDTNTKKNGGKMTSFDSTDTNLEDDFKTAAFK 208 Query: 252 KSQNNTTN-PYVT--QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302 + T P + +G I + K D ALK+ + + + Sbjct: 209 LKKGEYTKTPVKSTSSQGYFIIKMNSKSDKKSFSALKSKMKSILVEKTMSDTTE 262 >gi|302534870|ref|ZP_07287212.1| lipoprotein [Streptomyces sp. C] gi|302443765|gb|EFL15581.1| lipoprotein [Streptomyces sp. C] Length = 212 Score = 36.6 bits (82), Expect = 5.3, Method: Composition-based stats. Identities = 14/125 (11%), Positives = 39/125 (31%), Gaps = 11/125 (8%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-----------LEKIAVQELIV 82 S + GE IT + ++ ++ + E LE++ + ++I Sbjct: 27 CSGETRPGTAAVVGGERITTSALQAQVGDVRAAQDKSEQGAQLIGATAGLERLKLNKMIQ 86 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + ++ E +G++ V G + L + + + + Sbjct: 87 SAVLERAAEDAGLSVSPKEVQDVRKAQLEQLGGEKALRDAALQQAQLAPGQIEADTRFKL 146 Query: 143 IWPDV 147 + + Sbjct: 147 LRDKL 151 >gi|242308919|ref|ZP_04808074.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239524583|gb|EEQ64449.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 489 Score = 36.6 bits (82), Expect = 5.3, Method: Composition-based stats. Identities = 40/315 (12%), Positives = 82/315 (26%), Gaps = 31/315 (9%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61 K L I + T F+ F S+ S + + + ++ + + A Sbjct: 5 MQKHKKYLMVIIWISTIAFIGAGFVGWGSYSFSSTSNA---VAVVGDIKVSIDKMQREYA 61 Query: 62 LLK-------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 L Q +E+ A+ LIV+ L G+ + Sbjct: 62 RLYNIYNQLVGGTLDDEQAKKMGIEEQAINNLIVKALMLNYAYDLGLRVSKEEIIQEITS 121 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 D + K + + K D +L +EI A Sbjct: 122 IEGFQNKGKFDEQIYKQTLKDNQLKPKDFEEGIEEGLLLQKLDALLNIPLTPLEIEALGA 181 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228 + + + K + + KD +++ + + + + Sbjct: 182 AYSMEDLVHIEVINKKDIVFTPKEEEIKKYWENNKDIYQTQRGYEISSIFIPLDSIAVEE 241 Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288 ++ + F+N S + + +K A K L Sbjct: 242 NAL--------EQYYKDFKNQFLDSNGQIIPFAQAKD-----KVIEK--FRDSQAQKEAL 286 Query: 289 SAQNTPTKIEKHEAE 303 + K E EA+ Sbjct: 287 KEYISLRKGENQEAK 301 >gi|218768878|ref|YP_002343390.1| hypothetical protein NMA2141 [Neisseria meningitidis Z2491] gi|121052886|emb|CAM09238.1| hypothetical protein NMA2141 [Neisseria meningitidis Z2491] Length = 239 Score = 36.6 bits (82), Expect = 5.4, Method: Composition-based stats. Identities = 11/166 (6%), Positives = 45/166 (27%), Gaps = 9/166 (5%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V + + E ++ + ++ Q ++ + A+ Sbjct: 73 VQNRFKIAEASFYAEEYVRFLERSETVSESALRQFYERQIRMIKLQQVSFATEEEARQAQ 132 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTT-NPYVTQ 264 + L+ ++++ + +++ L + ++ + T +P Sbjct: 133 QLLLKGLSFEGLMKRYPNDEQAFD----GFIMAQQLPEPLASQFAAMNRGDVTRDPVKLG 188 Query: 265 KGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + + D ++ L K +++ Sbjct: 189 ERYYLFKLSEVGKNPDAQPFELVRNQLEQGLRQEKARLKIDAILEE 234 >gi|270308377|ref|YP_003330435.1| protein export protein [Dehalococcoides sp. VS] gi|270154269|gb|ACZ62107.1| protein export protein [Dehalococcoides sp. VS] Length = 421 Score = 36.6 bits (82), Expect = 5.4, Method: Composition-based stats. Identities = 25/288 (8%), Positives = 72/288 (25%), Gaps = 33/288 (11%) Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 G I++ +I I + I L+ LK + + + Sbjct: 119 GYTISEDEIDTAIEE-NSLNDVPAVRDIVRASLLTNMLKTEYFDPQVPQTAEQREALAML 177 Query: 108 QHARN-------TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160 + N + E+F++ + + N AI + + + + Sbjct: 178 LESENAASEVLAGITTDEEFAAKAAELSLESNTKTDEGAIDFKPANTITSLYGSAILEKY 237 Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV---------QKRIKDAEESRLR 211 + R + + + ++ + + Sbjct: 238 VFSTTGYDYTLVQDADVSKQRAYWLIEVLERKTDSEQIHTLGMLLPSEQVALEVKARLEA 297 Query: 212 LPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHP---QFQNLLKKSQNNTTNPYV----- 262 + +++ + + + G ++ S + N +P Sbjct: 298 GEDWGDLAVEYSQLANVEENRGDMDWITFSSVPENVADIIFATDVELNTVLDPIQDDTNY 357 Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 T+ G + + + L K+E+ + L++ Sbjct: 358 TRGGCWIVRLKSIDENRELNEDDRTL---LINNKLEQ----WTTDLKN 398 >gi|317014385|gb|ADU81821.1| hypothetical protein HPGAM_05060 [Helicobacter pylori Gambia94/24] Length = 487 Score = 36.6 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 88/317 (27%), Gaps = 21/317 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK + +EL + +K +EKS DS A + GL A Sbjct: 61 RRLKDAYAESIPD---FKELTEDQIKAMHLEKSA--LDSLINQALLRNFALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + ++ + K+ +E QK+ + + Sbjct: 116 EVAKEIRKTSVFQKDGVFDEELYKNILKQSHYRPKHFEESVEKLLIIQKISALFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + K K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILNPSDVKISLNEEEMKKYYENHRKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + +N + + + L +++ + + K Sbjct: 236 ASLEKTDLKELEEYYHKNKVS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EK-HEAEYVKKLRSNAI 313 + Y+ ++NA Sbjct: 284 NEKALRSYIALKKANAQ 300 >gi|218281164|ref|ZP_03487690.1| hypothetical protein EUBIFOR_00251 [Eubacterium biforme DSM 3989] gi|218217610|gb|EEC91148.1| hypothetical protein EUBIFOR_00251 [Eubacterium biforme DSM 3989] Length = 341 Score = 36.6 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 27/234 (11%), Positives = 66/234 (28%), Gaps = 18/234 (7%) Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93 + + ++ +I+ + IT D+ A I + + + I E K Sbjct: 36 AKSSNNEQVVASIDKDDITANDLYDESAPYDGSTIYNMYKNAVIDQSI-------ETTKD 88 Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153 + + ++ + +S L K G I S+ + + Sbjct: 89 IKKQANTLESNIKSNASKQSDDYESTLTSELAKYGYSSFEQLNDYCITSVKEKEMNKKY- 147 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213 E+ ++ T + + + N + + K+ + L Sbjct: 148 --ITKHFDEVKKAWEEKSPRT-------VSIIKMEVSDADNLTETETKKKNNIDKALEKE 198 Query: 214 KDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG 266 + + F+ + G A Y+ + + + T +KG Sbjct: 199 SFADVAKAFSEDSNTANKKGFAGYVDSNSTSSDSSSTSTVPADVVTAAINLKKG 252 >gi|145493441|ref|XP_001432716.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124399830|emb|CAK65319.1| unnamed protein product [Paramecium tetraurelia] Length = 705 Score = 36.6 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 25/207 (12%), Positives = 67/207 (32%), Gaps = 7/207 (3%) Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104 +N +VIT + + K Q + + ++EL E +K + ++ + N ++ Sbjct: 331 RVNEDVITKQEFENLLRDAKQQ-----IRQEVLEELKREQDEKMQQYETKLQTKYNPLDE 385 Query: 105 FFVQHA--RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 Q + +++ +L + ++ + Y I + + E Sbjct: 386 QIAQEYLTQVKFQRYKEYLDYLMEYYYNNDKQEYYKLIDEYNQRLKDTALNGMVEVQKQE 445 Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 I + K V + + +L++ ++ ++++ +E R NK E Sbjct: 446 ILKLQAITKKKIVEQNQQLEIALYNQKKELKDIIPIKNKLQERKEDYQRFQIQQNKHEYK 505 Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNL 249 + + + Sbjct: 506 FQFANVNLTIDPFEFKTDQQVDEIRKQ 532 >gi|331087208|ref|ZP_08336278.1| hypothetical protein HMPREF0987_02581 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408894|gb|EGG88355.1| hypothetical protein HMPREF0987_02581 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 465 Score = 36.6 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 22/219 (10%), Positives = 57/219 (26%), Gaps = 20/219 (9%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQKING 70 +K L +F++I F ++ I + + ++ R+ A G Sbjct: 1 MKKLKIFFIVIFFVLLAIPVVTFNTEENAV-----------SEVDNRMLAANPVSAIREG 49 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 E A++ + + + + T + + + + + G F + G Sbjct: 50 EDATQAIENYVNDRIGLRNEMIKLYTVGHDKIFHEMIHPSYVYGQDGYVFLNTGGNPVFG 109 Query: 131 DNHFKQYLAIQSIWPDVVKNDF-------MLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 D H I++I + K L+ E+ + Sbjct: 110 DYHIAFADMIKTIQDYCEAREIPFLFVFEPAKTTVLQEELEEGWNYDNRWVQQFLKELDQ 169 Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222 + + + + + + Sbjct: 170 REIHYVDNTEILEEKTEEGEAVFNKKYDGGHWNELGAFY 208 >gi|306830936|ref|ZP_07464098.1| peptidyl-prolyl cis-trans isomerase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325977825|ref|YP_004287541.1| foldase protein PrsA [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|304426959|gb|EFM30069.1| peptidyl-prolyl cis-trans isomerase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177753|emb|CBZ47797.1| foldase protein PrsA [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 368 Score = 36.6 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 26/315 (8%), Positives = 69/315 (21%), Gaps = 43/315 (13%) Query: 14 KLLTTYFVLIIFCIVPIVS---YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70 K + + ++ + ++ T+ G+ IT D Sbjct: 31 KAFKGVSIAVASALIGAGVTYLATNSNSETKALVTMKGDTITVSDFYNAAKSTSSS---- 86 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + + LI+ + + + D + ++ SA + Sbjct: 87 ---QQTMLNLILSRVFEDQYGDKVSDDDVSEAYNTTASSYGSSFSSALSAAGLTSD--TY 141 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + + ++ K K E I + + + Sbjct: 142 KQQIRTSMLVEYAVKQAAKKKLTTKNYKAAYEDYNPDTTAIVIALSDEDTANSVHDQATA 201 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250 + + K A+++ L E ++ F Sbjct: 202 DGADFETIAKDNTTADKTEYTFDSADTD------------------LPEDVMNAAFDQ-- 241 Query: 251 KKSQNNTTNPYVT------QKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIE--KHE 301 + + ++ + K + + K L + Sbjct: 242 --DEGSVSDVIKVLDTSTYSYTYYIVKTTKKTEKDSDWKTYKKRLKKIILAQYESDTDFQ 299 Query: 302 AEYVKKLRSNAIIHY 316 E + K A + Sbjct: 300 NEVIAKALDKANVKI 314 >gi|288904884|ref|YP_003430106.1| peptidylprolyl isomerase [Streptococcus gallolyticus UCN34] gi|288731610|emb|CBI13165.1| putative peptidylprolyl isomerase [Streptococcus gallolyticus UCN34] Length = 369 Score = 36.6 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 26/315 (8%), Positives = 69/315 (21%), Gaps = 43/315 (13%) Query: 14 KLLTTYFVLIIFCIVPIVS---YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70 K + + ++ + ++ T+ G+ IT D Sbjct: 31 KAFKGVSIAVASALIGAGVTYLATNSNSETKALVTMKGDTITVSDFYNAAKSTSSS---- 86 Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 + + LI+ + + + D + ++ SA + Sbjct: 87 ---QQTMLNLILSRVFEDQYGDKVSDDDVSEAYNTTASSYGSSFSSALSAAGLTSD--TY 141 Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190 + + ++ K K E I + + + Sbjct: 142 KQQIRTSMLVEYAVKQAAKKKLTTKNYKAAYEDYNPDTTAIVIALSDEDTANSVHDQATA 201 Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250 + + K A+++ L E ++ F Sbjct: 202 DGADFETIAKDNTTADKTEYTFDSADTD------------------LPEDVMNAAFDQ-- 241 Query: 251 KKSQNNTTNPYVT------QKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIE--KHE 301 + + ++ + K + + K L + Sbjct: 242 --DEGSVSDVIKVLDTSTYSYTYYIVKTTKKTEKDSDWKTYKKRLKKIILAQYESDTDFQ 299 Query: 302 AEYVKKLRSNAIIHY 316 E + K A + Sbjct: 300 NEVIAKALDKANVKI 314 >gi|170721642|ref|YP_001749330.1| hypothetical protein PputW619_2461 [Pseudomonas putida W619] gi|169759645|gb|ACA72961.1| conserved hypothetical protein [Pseudomonas putida W619] Length = 213 Score = 36.6 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 41/155 (26%), Gaps = 11/155 (7%) Query: 34 KSWAMSSRIRTTINGEVITDGDISK-----------RIALLKLQKINGELEKIAVQELIV 82 + +NG I + + + ++ + L A+ ELI Sbjct: 13 AKAGWADSPAARVNGVDIGLLRLERYFSEYLQAQGRAVTSIRNPTLYKRLRSQALDELID 72 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + L QE ++ GI V+ + A + + + Sbjct: 73 KELLWQEAQRRGIAISDEQVSAQLGEVEAAFSSPALFERRLAEAGFDRAAYADYLHRELA 132 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 + + + E+E + + + Sbjct: 133 AQQVYAQLSAVAEPTQAEVEAFYQANQERLQGAQN 167 >gi|313229342|emb|CBY23929.1| unnamed protein product [Oikopleura dioica] Length = 664 Score = 36.2 bits (81), Expect = 5.8, Method: Composition-based stats. Identities = 19/209 (9%), Positives = 58/209 (27%), Gaps = 1/209 (0%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 + G + D+ R Q+ + + + E+ + +++ K + Sbjct: 386 VGGPEVIQLDVESRKKSASKQRSTKKATRSNLGEMYDDRQFLEKLAKDSALMKDHNGKNS 445 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + ++ +D + F +Q ++ ++ + + +K D L+ + Sbjct: 446 VGELIKHGIRYLDDRADFWTQQKPEYTRSRERTMLKPLPVESIKADLSAAIKLLDDKEFE 505 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 K + P Q + A + + + + +K + Sbjct: 506 ESLKAVIDINTNVETHPDVNKGPMMC-ALQADINSVYGQALLALGKNEESITRHKKELAA 564 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 I + +L + Sbjct: 565 AKKSGITDLKVRAMDNLAEAYVKNQNYKH 593 >gi|198435360|ref|XP_002122992.1| PREDICTED: similar to Rho interacting protein 3 [Ciona intestinalis] Length = 2413 Score = 36.2 bits (81), Expect = 5.8, Method: Composition-based stats. Identities = 25/260 (9%), Positives = 79/260 (30%), Gaps = 10/260 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112 D++K A LK + + V +LI + ++ K+ ++ + Sbjct: 1048 QHDVNKLSADLKTSQAATTRLEDKVAKLIAQNQVDEDCNKTLQ----EQLHKEKETCKKL 1103 Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172 + E + + + + ++ + K K + Sbjct: 1104 RKILEEHDDVVSANEKQLHETKQALDQYSLQLRIAEEGRLASQRTVHDLTVELRKAKDEI 1163 Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232 ++ + + +K + D EE RL+ K + +G Sbjct: 1164 QKQKQSTDQV-----TRDLRARLTTAEKELTDIEEIRLKHKDAPESSFKAKLTELEAEMG 1218 Query: 233 KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC-DKRDLGGEIALKAYLSAQ 291 ++ + L + +N ++ + + + + D+++ + + + + Sbjct: 1219 GTGQMIAARLSALERPRRDSDSSNASDKETSSQKLHRLEAEIDRKNKEIKSMNEQFKEME 1278 Query: 292 NTPTKIEKHEAEYVKKLRSN 311 + + + + +LR+ Sbjct: 1279 QRENEANEEFTKKLNELRAR 1298 >gi|83589867|ref|YP_429876.1| hypothetical protein Moth_1019 [Moorella thermoacetica ATCC 39073] gi|83572781|gb|ABC19333.1| Protein of unknown function DUF218 [Moorella thermoacetica ATCC 39073] Length = 461 Score = 36.2 bits (81), Expect = 5.8, Method: Composition-based stats. Identities = 22/221 (9%), Positives = 56/221 (25%), Gaps = 15/221 (6%) Query: 10 SDFIKLLTTYFVLIIFCIVPIV-SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68 +K L +L I S +S +NG+ I + K + ++L Sbjct: 208 RILLKALIVMTLLSILAFTACARSSQSPKEIEEAVALVNGQPINKEALEKEMLRMQLMAE 267 Query: 69 --------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114 + + + +S +T + N V+ Sbjct: 268 MRVQSGTVSIDEFLKQSGRDWSKMSPEEKRYYLRAKRQSEMTGEKNEAFNRLVREEVLYQ 327 Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174 + ++ + + L+ +S+ + + L+ + M + Sbjct: 328 EAVKEGYEVSIDEARRRYQEIETLSQESLKEALKDAKAKEEIERLQEVEKKFMELMGFTS 387 Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 V + + K + +R + Sbjct: 388 PEALTEYRVQRLMRTMPISRLREKFKADWGNKHPEIRGDEF 428 >gi|167033456|ref|YP_001668687.1| SurA domain-containing protein [Pseudomonas putida GB-1] gi|166859944|gb|ABY98351.1| SurA domain [Pseudomonas putida GB-1] Length = 213 Score = 36.2 bits (81), Expect = 5.8, Method: Composition-based stats. Identities = 19/155 (12%), Positives = 44/155 (28%), Gaps = 11/155 (7%) Query: 34 KSWAMSSRIRTTINGEVITDGDISK-----------RIALLKLQKINGELEKIAVQELIV 82 + + +NG I + + + ++ + L A+ ELI Sbjct: 13 ARASWADVPAARVNGVEIELLRLERYFSEYLDAQGRAVTSIRNPGLYKRLRDQALDELID 72 Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142 + L QE ++ GI V+ + G A + + + + Sbjct: 73 KELLWQEAQRQGIAVSDERVSAHVGEVEAAFGSPAVFERRLAEAGFDRAQYTEYTRQDMA 132 Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 + + E+E + K + + Sbjct: 133 AQQVYAQLSAVDAPSQGEVEAFYDANKERLQGAQN 167 >gi|268680048|ref|YP_003304479.1| peptidyl-prolyl cis-trans isomerase D,- like protein [Sulfurospirillum deleyianum DSM 6946] gi|268618079|gb|ACZ12444.1| putative peptidyl-prolyl cis-trans isomerase D,- like protein [Sulfurospirillum deleyianum DSM 6946] Length = 486 Score = 36.2 bits (81), Expect = 5.9, Method: Composition-based stats. Identities = 46/386 (11%), Positives = 102/386 (26%), Gaps = 77/386 (19%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI- 60 + L I + T FV F +S + I+ + Sbjct: 5 MQRHKKYLVVTIWISTIAFVGAGFVGWGAYDLNQDRAAS--VAKVGNRTISVQEFQSAYA 62 Query: 61 ------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF-- 106 L + Q L+KI + LI +TL ++ G+ Sbjct: 63 SHYNFYNNLLQGQLTQEQAEQMGLDKIVMSSLINQTLLLNYADELGLLVSKEETMERLKN 122 Query: 107 -VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK---------------- 149 N + E + + L I N ++ LA + + + Sbjct: 123 NPNFQENGVFNKELYYTILKSNRIKPNDYEHELAKEILHTKLENIFKLPASDKEIEMFAS 182 Query: 150 -------------NDFMLKYGNLEMEIPANKQKMKNITVREY------------------ 178 + + E I A +K K + + Sbjct: 183 AFFMEDRLAIETISLNANEVSADEEAIKAYWEKNKANYLTQKSYTLELLNLPPSKTPFDD 242 Query: 179 -----LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 + + F + + K A + RL+ K A K +++ + Sbjct: 243 KTLEAFYAEEKHNYQHADGKLMLFEEAKEKLAIDLRLKNDKKSALESFLAFKKGEINATE 302 Query: 234 AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQ 291 + + ++D + +++ P + I + + + + K S Sbjct: 303 TKVVYDTDSLFPMDKIQIAAKDEVLKPVIINNQYVVIRVKEIKFPEPMSYEMAKKEASND 362 Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHYY 317 T E+ + +++A + + Sbjct: 363 LLKTLKEEALEK-----KAHAKVEQF 383 >gi|149194584|ref|ZP_01871680.1| hypothetical protein CMTB2_01034 [Caminibacter mediatlanticus TB-2] gi|149135328|gb|EDM23808.1| hypothetical protein CMTB2_01034 [Caminibacter mediatlanticus TB-2] Length = 482 Score = 36.2 bits (81), Expect = 6.0, Method: Composition-based stats. Identities = 25/221 (11%), Positives = 67/221 (30%), Gaps = 17/221 (7%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + T + + + + + + + IT D Sbjct: 1 MIEWMQTHRKWLVITIWIATIAFVGAGFVGWGQFQFGKKTSTIAKVKDTEITIQDWQNAY 60 Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 L + L+K A+ I + + +Q + G+ N + + Sbjct: 61 NNLFDRVNQQLGGKLDEATAKKLGLQKEALDIAIQQGILRQYAKDLGLYVTDNDIAKKIL 120 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 + +N +++ ++L G F+ L Q + ++K + M I + Sbjct: 121 EVFKN----KQNYENYLKNTGQKAKDFENNLRKQLLVEKLLKYLNLKPQKTEIMTIASAL 176 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208 N+ ++ + + +N+++ K ++ Sbjct: 177 YNADNLDIKVINKNNIKVDVDENEIKKYWEKNKNKYLSQNQ 217 >gi|294786339|ref|ZP_06751593.1| peptidylprolyl isomerase PrsA1 [Parascardovia denticolens F0305] gi|315225880|ref|ZP_07867668.1| peptidyl-prolyl cis-trans isomerase [Parascardovia denticolens DSM 10105] gi|294485172|gb|EFG32806.1| peptidylprolyl isomerase PrsA1 [Parascardovia denticolens F0305] gi|315120012|gb|EFT83144.1| peptidyl-prolyl cis-trans isomerase [Parascardovia denticolens DSM 10105] Length = 300 Score = 36.2 bits (81), Expect = 6.0, Method: Composition-based stats. Identities = 33/310 (10%), Positives = 82/310 (26%), Gaps = 38/310 (12%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 ++ + T I+ + SS T G ++ + + Sbjct: 1 MRKMKTPLTPILATLAAATLLLGGCGSSPSVATYQGGDVSQEAFYQELKSSPSS------ 54 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 K + L++ G + V+ + + G + +L + + Sbjct: 55 -KTILANLLIYRALDHA---YGSSVSQAQVDKAYKGYQDQYGSGFDS---YLSQNNYTKD 107 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 FK+ L + +K K ++ + ++ +L S Sbjct: 108 SFKRSLRTNLLSEVALKKL--KKVSPAQLADAWKDFH------PQVTVQHILVSD----- 154 Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESD-LHPQFQNLL 250 Q + + + + ++ GK + + F++ Sbjct: 155 ------QATAQQVIDQLGQGKDFSELAKTYSLDTSSKDEGGKVTFTSSNRAYDSTFKDAA 208 Query: 251 KKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT--KIEKHEAEYVK 306 TT+P G E I + G + K L+ + + + Sbjct: 209 YALTQGKYTTSPVKVVDGYEVIKMVSNPSKGTFASRKKELTEAVYAKWLRDSTVMKQVIS 268 Query: 307 KLRSNAIIHY 316 ++ N + Sbjct: 269 QVLKNEKVQI 278 >gi|297584461|ref|YP_003700241.1| hypothetical protein Bsel_2171 [Bacillus selenitireducens MLS10] gi|297142918|gb|ADH99675.1| hypothetical protein Bsel_2171 [Bacillus selenitireducens MLS10] Length = 250 Score = 36.2 bits (81), Expect = 6.0, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 50/162 (30%), Gaps = 17/162 (10%) Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------------ELEKIA 76 S + + T+NGE I ++ ++ ++ ++++ Sbjct: 58 PSESVLNLEGDVVATVNGEDIPMANLEMQLQQYEMMFAQQGIDFEDEENMALLMQIQEGI 117 Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136 V ELI L QE + I D + V Q +DF L QG ++ + Sbjct: 118 VDELIQLELLVQEADSQNIQADEDEVQAEMEQIRSQF---DDDFEEVLASQGYTEDLLEN 174 Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178 + ++ +++ + + + Sbjct: 175 EIRDSLKLNQLLSPEYIETLDFEVTDEELEEAYEQQAAQNPE 216 >gi|88801377|ref|ZP_01116905.1| thiol:disulfide interchange protein DsbD precursor [Polaribacter irgensii 23-P] gi|88782035|gb|EAR13212.1| thiol:disulfide interchange protein DsbD precursor [Polaribacter irgensii 23-P] Length = 657 Score = 36.2 bits (81), Expect = 6.0, Method: Composition-based stats. Identities = 19/162 (11%), Positives = 44/162 (27%), Gaps = 6/162 (3%) Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTT--INGEVITDGDISKRIALLKL----QKINGELEK 74 + F + + S S + I IN T+ D+ LL+ + N E Sbjct: 4 IFSFFLLFTVFSIFSQTEENPIVWKSSINQISETEYDVILTAKLLQAWHLYSQYNPEGAS 63 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 A++ +I E + I D+ + + + Sbjct: 64 QALEIVIPEGKTGYALVGKAIESDTQKEYSEIWGKEEVYFADRAIITQKIKIRDKTIPSI 123 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + Q ++ + + +I + + + Sbjct: 124 TVSIYGQVCKQACIQIEESFSFPLDGKKIKKEIIVLNDKSKT 165 >gi|145516298|ref|XP_001444043.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124411443|emb|CAK76646.1| unnamed protein product [Paramecium tetraurelia] Length = 1645 Score = 36.2 bits (81), Expect = 6.1, Method: Composition-based stats. Identities = 32/325 (9%), Positives = 88/325 (27%), Gaps = 27/325 (8%) Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK 67 + + I F L++ ++P++ ++ + I ++N I + I + LK Sbjct: 1326 RIDNHISYFYHIFALVLISLIPVIYALAYQLYYNII-SVNVTPINNQAIQAQEMRLKFIT 1384 Query: 68 INGELEKIAVQELI----------------------VETLKKQEIEKSGITFDSNTVNYF 105 ++ ++ + +Q I + Sbjct: 1385 TINRYDQFLIKSYFESYCKLSQSNASYKCSFNNIYSDNQILQQIEMNETIIQEELNTLQQ 1444 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + + +KQ I + F + + Sbjct: 1445 LDFSNFFFNTINSNQFNSEEKQSILSKDTCLLTNCDMKKDIFQERLFQETLNSYFFQGII 1504 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 ++ + ++ + + P+ KL + + L ++ +F+ Sbjct: 1505 KLHQIVSSLYLQFNLIYQNLNTPEEKLNAIQDIMEENDYLIYILWGLDAIQYQISEFSQY 1564 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285 + S+ + L Q+ + + +I I K+ + + K Sbjct: 1565 FVNTSLTTLNDFTANMLVNVIQSCDTQGMLLMVGVIQ----ILFIQILMKKQIIAKQLFK 1620 Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRS 310 I++ Y +KL+ Sbjct: 1621 IVPLQIIFQKNIQRQLTVYQRKLQK 1645 >gi|317128538|ref|YP_004094820.1| hypothetical protein Bcell_1827 [Bacillus cellulosilyticus DSM 2522] gi|315473486|gb|ADU30089.1| hypothetical protein Bcell_1827 [Bacillus cellulosilyticus DSM 2522] Length = 179 Score = 36.2 bits (81), Expect = 6.2, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 47/153 (30%), Gaps = 7/153 (4%) Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63 K F + + +++I + + T+NGE I D+ K + Sbjct: 3 KYFKFNNSIFIISIAVLLILILAPFNKGKMEEQVEIDAVVATVNGENIIYKDVIKVKNSM 62 Query: 64 KL-------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +L +L + A+++ I+ L QE ++ I V Sbjct: 63 RLKKYNDLTNNNEDKLTEAAIEQRIIHRLLIQEAQRLNIEVSDEEVAIQLQLIKEVLPSD 122 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 S + + D + I +++ Sbjct: 123 LTLEESLILQNYTEDALLAEIKEQLMIERLLLE 155 >gi|284161890|ref|YP_003400513.1| nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Archaeoglobus profundus DSM 5631] gi|284011887|gb|ADB57840.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Archaeoglobus profundus DSM 5631] Length = 231 Score = 36.2 bits (81), Expect = 6.3, Method: Composition-based stats. Identities = 12/105 (11%), Positives = 25/105 (23%), Gaps = 18/105 (17%) Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281 + + + ++ L P P T G+ I IC Sbjct: 75 YNTALVIHRGKILGRHRKTKLFPLLNEHKIFKAGKVVKPIETPFGLFGIMIC-------Y 127 Query: 282 IALKAYLSAQNTPTKIE----------KHEAEYVKKLRSNAIIHY 316 ++ + + + + LR+ A I Sbjct: 128 ELRFPEIARKLVNKGAKILFVIAQFPSERIEHWKVLLRARA-IEN 171 >gi|313633259|gb|EFS00126.1| foldase protein PrsA 1 [Listeria seeligeri FSL N1-067] Length = 102 Score = 36.2 bits (81), Expect = 6.3, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 19/65 (29%), Gaps = 1/65 (1%) Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA-QNTPTKIEKHEAEYVKKLRSN 311 ++ + T G I + K D KA + ++ +KK Sbjct: 14 KTDDVSGIVKTSYGYHLIQLVKKTDKTTYAKDKAKVKEAYIQSQLTSENMTAALKKELKA 73 Query: 312 AIIHY 316 A I Sbjct: 74 ANIDI 78 >gi|313213107|emb|CBY36969.1| unnamed protein product [Oikopleura dioica] gi|313241588|emb|CBY33830.1| unnamed protein product [Oikopleura dioica] gi|313242426|emb|CBY34573.1| unnamed protein product [Oikopleura dioica] Length = 412 Score = 36.2 bits (81), Expect = 6.3, Method: Composition-based stats. Identities = 19/209 (9%), Positives = 58/209 (27%), Gaps = 1/209 (0%) Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 + G + D+ R Q+ + + + E+ + +++ K + Sbjct: 134 VGGPEVIQLDVESRKKSASKQRSTKKATRSNLGEMYDDRQFLEKLAKDSALMKDHNGKNS 193 Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165 + ++ +D + F +Q ++ ++ + + +K D L+ + Sbjct: 194 VGELIKHGIRYLDDRADFWTQQKPEYTRSRERTMLKPLPVESIKADLSAAIKLLDDKEFE 253 Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225 K + P Q + A + + + + +K + Sbjct: 254 ESLKAVIDINTNVETHPDVNKGPMMC-ALQADINSVYGQALLALGKNEESITRHKKELAA 312 Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254 I + +L + Sbjct: 313 AKKSGITDLKVRAMDNLAEAYVKNQNYKH 341 >gi|154148500|ref|YP_001406386.1| putative peptidyl-prolyl cis-trans isomerase D-like protein [Campylobacter hominis ATCC BAA-381] gi|153804509|gb|ABS51516.1| putative peptidyl-prolyl cis-trans isomerase D-like protein [Campylobacter hominis ATCC BAA-381] Length = 487 Score = 36.2 bits (81), Expect = 6.3, Method: Composition-based stats. Identities = 26/232 (11%), Positives = 52/232 (22%), Gaps = 15/232 (6%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI- 60 K SL + + T FV F +S + I+ + + Sbjct: 5 MQKHKKSLIPTVWISTIAFVGAGFVGWGAYDLNKSRSTS--VAKVGDTAISIKEFQNKYS 62 Query: 61 ------------ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 Q L+++A+ LI + + + GI V + Sbjct: 63 EVYNYLKSISDGKFTDEQAKKMHLDEMAINALIQDAILLNFAKDLGINASDEEVAREIIN 122 Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168 + + +Y + K + +I Sbjct: 123 SDNFKTDGKFSKKLYENAMKNAGLSQNEYEKELKKVIILDKLKKAISIKPNADDIEMLTA 182 Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220 E I S ++ K ++ D +E Sbjct: 183 SEFMQDKVEIAIVDQNVSTITFNDDELKDFWEKNKSKYLTQKTYEMDAYFVE 234 >gi|125973773|ref|YP_001037683.1| copper amine oxidase-like protein [Clostridium thermocellum ATCC 27405] gi|256004504|ref|ZP_05429483.1| copper amine oxidase domain protein [Clostridium thermocellum DSM 2360] gi|281417930|ref|ZP_06248950.1| copper amine oxidase domain protein [Clostridium thermocellum JW20] gi|125713998|gb|ABN52490.1| copper amine oxidase-like protein [Clostridium thermocellum ATCC 27405] gi|255991509|gb|EEU01612.1| copper amine oxidase domain protein [Clostridium thermocellum DSM 2360] gi|281409332|gb|EFB39590.1| copper amine oxidase domain protein [Clostridium thermocellum JW20] gi|316940034|gb|ADU74068.1| copper amine oxidase-like domain-containing protein [Clostridium thermocellum DSM 1313] Length = 259 Score = 36.2 bits (81), Expect = 6.3, Method: Composition-based stats. Identities = 24/233 (10%), Positives = 67/233 (28%), Gaps = 15/233 (6%) Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYK---SWAMSSRIRTTINGEVITDGDISKRIAL 62 + F L + +LIIF S+ S+A + I+ +NG I D++ I Sbjct: 1 MKKIRVFFSYLVVFCILIIFSFTGSFSFAVQNSYASADEIKVFLNGVEI-KFDVAPYIKN 59 Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122 + + + ++ + + + + T + F + Sbjct: 60 GRTMVPFRAIFEALGVDISWNGVNRTILATNDTTEIYIEIGKAFAYVNGYKVNLDAEAEI 119 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + + + W + ++ + + + Y Sbjct: 120 VGGRTFVPLRFVSENAGADVSWDGARRTVYISYVNQVRD-----------LGEKSYFRDL 168 Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 + ++ K E+++ + + + K+ S I +++ Sbjct: 169 EFTVDGWESEADGKILKVYGKVNLENKMLMIELYDSSRKYVSGIAEITGKDGG 221 >gi|212213414|ref|YP_002304350.1| hypothetical protein CbuG_1962 [Coxiella burnetii CbuG_Q212] gi|212011824|gb|ACJ19205.1| hypothetical protein CbuG_1962 [Coxiella burnetii CbuG_Q212] Length = 436 Score = 36.2 bits (81), Expect = 6.4, Method: Composition-based stats. Identities = 26/239 (10%), Positives = 64/239 (26%), Gaps = 11/239 (4%) Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI--RTTINGEVITDGDI---SKRIALLK 64 S F K + + + ++ + + S++ I T I ++ L Sbjct: 199 SFFSKKIAVFLISLLMIFIGAGVGFWFNPFSKLGRLAEI-TSPFTLDHICAYQQKYLTLV 257 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 Q ++E+ + E + K + + V E + Sbjct: 258 KQYKIAKIERQLLD----EKVAIAAARKRLADLNIPSSQNKRVIKNITPLNRDEQAEPYT 313 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + + +I+ ++ N + N L+ Sbjct: 314 LDEILLLELPPTNYSIRIKDSYDKQSLITFAKNNALAKDAIYYSYFHNRKKWYVLLYNYY 373 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRL-RLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 S D ++K + E L + K K + G+ + ++++ Sbjct: 374 HSKMDAHDAALKLLKKIKTEHIEIINLSLIQSKIKSRKNRVNSSFLKGGELGFSPQAEM 432 >gi|57167705|ref|ZP_00366845.1| conserved hypothetical secreted protein, putative [Campylobacter coli RM2228] gi|57020827|gb|EAL57491.1| conserved hypothetical secreted protein, putative [Campylobacter coli RM2228] Length = 495 Score = 36.2 bits (81), Expect = 6.5, Method: Composition-based stats. Identities = 19/260 (7%), Positives = 64/260 (24%), Gaps = 14/260 (5%) Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 LL I + + + I+ +Q + + + E Sbjct: 139 YELLNANNITPKEYEKTLSNEIIIGKLEQIFNLPQTDEELKMLGASYFMQDSLNIAKLEQ 198 Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDV--VKNDFMLKYGNLEMEIPANKQKMKNITVRE 177 + V + ++ + + + Sbjct: 199 DKENIKVNEEELKKLWNEHKEDYKTKKVYEISTYYLPVDMQKIDDSKLEEFYNNENNKFK 258 Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 Y + + ++ + + + + +KF + + Sbjct: 259 YKDFSGKIMSFEAAKKDVAKDYALAQLKNTANAKFLELKEGKDKFQKDEN---------I 309 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 +SD++ + L + + P Q G I + + + + P I Sbjct: 310 TDSDVYYPLEALSRAKNGDVLRPSEYQNGYIIIKLNKTNPVRTKT--FDEAREELMPIYI 367 Query: 298 EKHEAEYVKKLRSNAIIHYY 317 + + +++ ++ + + Sbjct: 368 SEQAKKNLEE-KAKQNLENF 386 >gi|300866602|ref|ZP_07111290.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300335374|emb|CBN56450.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 250 Score = 36.2 bits (81), Expect = 6.5, Method: Composition-based stats. Identities = 18/230 (7%), Positives = 56/230 (24%), Gaps = 1/230 (0%) Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 +L+ +++ + A T E ++ Sbjct: 6 QIGDKLLQAQDIPSLLKRYQLMPQFLRGTIEDQAIASYTCTEEERSAALEQFHAQHQLTS 65 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + A D+ + + + + ++ + +L R L Sbjct: 66 SEAKAAWLQSQDLTEEELVQMAIRPVLIEKFKQETWSSKVDNYFLGRKTHLDRVVYSLIR 125 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKS 253 + ++ + G+ + S HP + L Sbjct: 126 TKNPGLAHELYFRIAEGEQTFEEVARDYSEGPEAQTGGRLGPVSLSQPHPAISKLLSVSQ 185 Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303 P + + I + + +++ +L + T + + ++ Sbjct: 186 SGQLWAPRALAEWMVIIRLDKFMPAQLDDSMRRHLINELFETWVSEQLSQ 235 >gi|156379317|ref|XP_001631404.1| predicted protein [Nematostella vectensis] gi|156218444|gb|EDO39341.1| predicted protein [Nematostella vectensis] Length = 1026 Score = 36.2 bits (81), Expect = 6.6, Method: Composition-based stats. Identities = 30/267 (11%), Positives = 71/267 (26%), Gaps = 19/267 (7%) Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF------VQHARNT 113 + L K ++ L++ + + + QE + Q Sbjct: 3 LQLTKDNNLDAVLQQQIMDQFRKDNELLQEQLEQRKNKSLMDTKAKLAARLARRQEEARR 62 Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173 + L++Q + K A + P+V+ + L+ E Q+MK Sbjct: 63 KTEEDSAKRILEEQSLALAANKPKDADHVVVPEVIIPRETPEEQALKKEQERVIQEMKVR 122 Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233 E + K R + +L + + + + Sbjct: 123 HAEEAQRLKEKLERELKTDEEAAMQMKTADQERSLRELKDRHAAELSARGNNMSPEELQQ 182 Query: 234 AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293 + ++ + L ++ + +KR E + Sbjct: 183 LLAQHQQEVDDAMEKLDADRSRQQSSLQQ--------KLAEKRRKKLEAQKRKQEREMTR 234 Query: 294 P-----TKIEKHEAEYVKKLRSNAIIH 315 +++ E+VK+ A+I Sbjct: 235 EVMEQKKELQDIRTEHVKEAEKQAMIE 261 >gi|330814031|ref|YP_004358270.1| hypothetical SurA-like protein [Candidatus Pelagibacter sp. IMCC9063] gi|327487126|gb|AEA81531.1| hypothetical SurA-like protein [Candidatus Pelagibacter sp. IMCC9063] Length = 462 Score = 36.2 bits (81), Expect = 7.0, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 69/222 (31%), Gaps = 12/222 (5%) Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI------- 68 + ++ +F + S ++ + ++G+ I D + K Sbjct: 1 MLIVIIIAVFASWGVGDMFSAGKTN-VVAEVSGKNIYSEDYVNELRNGLQTKNYQNVSDA 59 Query: 69 -NGELEKIAVQELIVETLKKQEIEKSGITFDSN---TVNYFFVQHARNTGLSAEDFSSFL 124 L + +L+ E + + E+ I + + ++N S ++ +L Sbjct: 60 IKDNLHIQILNQLVAEKIFEIYAEEEKIIINDKTLSNFIKDIPEFSKNEKFSRTEYEKYL 119 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 K I F+ + +V++ + K I++ + + Sbjct: 120 LKNQISSFSFETSFKKNLLKKLIVESQNLDSISTSYHTTRVKDYFEKKISISYINLEDLY 179 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226 + + + + +K+ + E R N+ ++ Sbjct: 180 EDVDITEKEILDYHKKKPSYSNELRSIKYAVINQNKEANQSS 221 >gi|297545628|ref|YP_003677930.1| hypothetical protein Tmath_2254 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843403|gb|ADH61919.1| conserved hypothetical protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 238 Score = 36.2 bits (81), Expect = 7.0, Method: Composition-based stats. Identities = 16/150 (10%), Positives = 41/150 (27%), Gaps = 9/150 (6%) Query: 43 RTTINGEVITDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101 +NG I + R L L ++ +Q+LI E +++ K I Sbjct: 67 IAEVNGIPIYKNEFELRKELTLAPGVQTDNIDDYILQKLIKEKVQEYLASKYNIRVSERG 126 Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL--------AIQSIWPDVVKNDFM 153 +N + + + E + +Y ++ + Sbjct: 127 INEYIEKEKKEFNEYPEAKKKLDELIAASGMTEDEYWNTYEKYNAKRILLFSKLNNYIIE 186 Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + +++ + Y+ + Sbjct: 187 EGIKSGKLKKAEEMTNDVQNEYKRYVDSII 216 >gi|182438226|ref|YP_001825945.1| putative lipoprotein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466742|dbj|BAG21262.1| putative lipoprotein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 218 Score = 36.2 bits (81), Expect = 7.0, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 41/133 (30%), Gaps = 11/133 (8%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK-----------LQKINGELEKIAV 77 P++S + GE I + R A ++ L +G+L + + Sbjct: 20 PLLSACGNQSHPGAAAVVGGERIEVSTVQDRAADVRSAQENSPEAAQLVNKSGQLNRAKL 79 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 LI + + +G+T + G + L ++ + + Sbjct: 80 HGLIFGRILDRAAADAGVTVTRKEIQEMRKASGAQQGGEERFEAMMLQQRWVAPDQIDAD 139 Query: 138 LAIQSIWPDVVKN 150 + + P + + Sbjct: 140 MRQEVQLPKLAEA 152 >gi|171779578|ref|ZP_02920534.1| hypothetical protein STRINF_01415 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281680|gb|EDT47114.1| hypothetical protein STRINF_01415 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 352 Score = 36.2 bits (81), Expect = 7.0, Method: Composition-based stats. Identities = 32/330 (9%), Positives = 74/330 (22%), Gaps = 45/330 (13%) Query: 1 MTSKVFTSLSDFI--KLLTTYFVLIIFCIVPIVS---YKSWAMSSRIRTTINGEVITDGD 55 M +K + S I K + + ++ + ++ T+ G IT D Sbjct: 1 MANKEKSGFSKMIQSKAFKGVSIAVASALIGAGVTYLATNNNSETKALVTMKGNTITVSD 60 Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115 + ++ L + ++ G V + A + G Sbjct: 61 FYNAAKSTSSSQQT----------MLNLVLSRVFEDQYGDKVSDKDVTKAYNTTASSYGS 110 Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175 S + +KQ + + VK K + Sbjct: 111 SFPSALQAAGL---TTDTYKQQIRTSMLVEYAVKEAAKDKLTTKNYKDAYKDYNADTTAT 167 Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235 L + N+ G +I + + + + Sbjct: 168 VIALTDEDKANSVHNQATADGADFDKIAKENTTAKKTEYTFDSADT-------------- 213 Query: 236 YLLESDLHPQFQNLLKKSQNNTTNPYVT------QKGVEYIAICDKRDLGGE-IALKAYL 288 L + F+ + + ++ + K + + K L Sbjct: 214 KLPSDVMAAAFKQ----DEGSVSDVIKVMNSSTYSYTYYIVKTTKKTEKNADWKTYKKRL 269 Query: 289 SAQNTPTKIEKHE--AEYVKKLRSNAIIHY 316 + + K A + Sbjct: 270 KKIIMAKYQNDTSFQNQVISKALDKANVKI 299 >gi|84497837|ref|ZP_00996634.1| hypothetical protein JNB_17158 [Janibacter sp. HTCC2649] gi|84381337|gb|EAP97220.1| hypothetical protein JNB_17158 [Janibacter sp. HTCC2649] Length = 168 Score = 36.2 bits (81), Expect = 7.2, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 42/137 (30%), Gaps = 2/137 (1%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K + + + V +S S S++ ++G VIT+ + + + + Sbjct: 1 MKAVKARTIALALAGVLALSACSGTSSAQTAAVVDGRVITEQQVREATEQINAAFKPEQP 60 Query: 73 --EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130 A+ LI + +G + F + + + Sbjct: 61 LTAAQALTLLIRAPYINKAAADAGKAQSESAARAAFKDYPETPSDTTVEILQAEASLQQI 120 Query: 131 DNHFKQYLAIQSIWPDV 147 D+ +Q L + + Sbjct: 121 DDAGRQKLTKEFAALQM 137 >gi|306841864|ref|ZP_07474544.1| rotamase family protein [Brucella sp. BO2] gi|306287994|gb|EFM59396.1| rotamase family protein [Brucella sp. BO2] Length = 628 Score = 36.2 bits (81), Expect = 7.4, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 63/263 (23%), Gaps = 12/263 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----I 56 M + ++ +I L +++ F I I M+ T ++ D Sbjct: 1 MLDSLRSAAQSWIAKLLLGLLVLSFAIWGISDVFRGGMAGNAALTAGDSEVSATDYRFAY 60 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +++ L Q + A + + Q + + + Q A + Sbjct: 61 EQQLMRLSQQFRQRLTREQAKAIGVENQVLAQLAAGVVLDEAARNMQLGLSQDAIARLTA 120 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + D ++N + +E + K+ + ++ Sbjct: 121 EDPAFHDAGGNFNRARFDAVLRQSGIRAEDYLENRAKVARRQQIVEAATDGMKLPDTMLK 180 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + D +E+ E K Y Sbjct: 181 ALALYQGESRSADYIDVPAEKADAIPAPSEDVLKAY------FEVHKEDYKAPEYRKISY 234 Query: 237 LLESDLHPQFQNLLKKSQNNTTN 259 + + +Q+ + Sbjct: 235 VKLE--PSDIADPAAVTQDEISE 255 >gi|254719202|ref|ZP_05181013.1| rotamase family protein [Brucella sp. 83/13] gi|265984198|ref|ZP_06096933.1| rotamase [Brucella sp. 83/13] gi|306837950|ref|ZP_07470808.1| rotamase family protein [Brucella sp. NF 2653] gi|264662790|gb|EEZ33051.1| rotamase [Brucella sp. 83/13] gi|306406874|gb|EFM63095.1| rotamase family protein [Brucella sp. NF 2653] Length = 628 Score = 36.2 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 63/263 (23%), Gaps = 12/263 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----I 56 M + ++ +I L +++ F I I M+ T ++ D Sbjct: 1 MLDSLRSAAQSWIAKLLLGLLVLSFAIWGISDVFRGGMAGNAALTAGDSEVSATDYRFAY 60 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +++ L Q + A + + Q + + + Q A + Sbjct: 61 EQQLMRLSQQFRQRLTREQAKAISVENQVLAQLAAGVVLDEAARNMQLGLSQDAIARLTA 120 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + D ++N + +E + K+ + ++ Sbjct: 121 EDPAFHDAGGNFNRARFDAVLRQSGIRAEDYLENRAKVARRQQIVEAATDGMKLPDTMLK 180 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + D +E+ E K Y Sbjct: 181 ALALYQGESRSADYIDVPAEKADTIPAPSEDVLKAY------FEAHKEDYKAPEYRKISY 234 Query: 237 LLESDLHPQFQNLLKKSQNNTTN 259 + + +Q+ + Sbjct: 235 VKLE--PSDIADPAAVTQDEISE 255 >gi|15611978|ref|NP_223629.1| hypothetical protein jhp0911 [Helicobacter pylori J99] gi|4155485|gb|AAD06486.1| putative [Helicobacter pylori J99] Length = 487 Score = 36.2 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 24/178 (13%), Positives = 51/178 (28%), Gaps = 17/178 (9%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSDSAAKVGQIKISQEELAQEY 60 Query: 61 ALLK---------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105 LK Q LEK A+ LI + L + G+ V Sbjct: 61 RRLKDAYAESIPDFKELTEDQIKAMHLEKSALDSLINQALLRNFALDLGLGATKQEVAKE 120 Query: 106 FVQH--ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161 + + G+ E+ + KQ + + + + F LE Sbjct: 121 IRKTNVFQKDGVFDEELYKNILKQSHYRPKHFEESVERLLILQKISALFPKTTTPLEQ 178 >gi|227878609|ref|ZP_03996531.1| membrane nuclease [Lactobacillus crispatus JV-V01] gi|256850428|ref|ZP_05555856.1| DNA-entry nuclease [Lactobacillus crispatus MV-1A-US] gi|262046422|ref|ZP_06019384.1| DNA-entry nuclease [Lactobacillus crispatus MV-3A-US] gi|293380620|ref|ZP_06626673.1| DNA/RNA non-specific endonuclease [Lactobacillus crispatus 214-1] gi|227861786|gb|EEJ69383.1| membrane nuclease [Lactobacillus crispatus JV-V01] gi|256712825|gb|EEU27818.1| DNA-entry nuclease [Lactobacillus crispatus MV-1A-US] gi|260573293|gb|EEX29851.1| DNA-entry nuclease [Lactobacillus crispatus MV-3A-US] gi|290922807|gb|EFD99756.1| DNA/RNA non-specific endonuclease [Lactobacillus crispatus 214-1] Length = 283 Score = 35.8 bits (80), Expect = 7.7, Method: Composition-based stats. Identities = 18/195 (9%), Positives = 51/195 (26%), Gaps = 14/195 (7%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD--ISKRIALLKLQKINGE 71 K + T +F + + ++S + + + I D K+ + + E Sbjct: 4 KKIITLVSSTLFLFGGYGAITNPSLSQNVIAKV--KTIIKYDHSAEKKTKQIAQENKQTE 61 Query: 72 LEKIAVQELIVETLKKQEIEKSGITF---------DSNTVNYFFVQHARNTGLSAEDFSS 122 + +++ + I + K+ + N + N ++ S Sbjct: 62 KKIVSLDKKIAKLRKELKKYTGKHNIESVSAAKLASLNYSGKNIITVNNNDPSFSKSDLS 121 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + + + ++++ M + + K + R Sbjct: 122 TNRGAWQEYGNLDGLNRVTAANALLIQS-LMPSARREPLHVDPTGWHNKRVAGGWLYNRC 180 Query: 183 VLFSIPDNKLQNQGF 197 L N Sbjct: 181 HLIGYQLTGQNNNIK 195 >gi|218675330|ref|ZP_03524999.1| peptidyl prolyl cis-trans isomerase D signal peptide protein [Rhizobium etli GR56] Length = 579 Score = 35.8 bits (80), Expect = 7.7, Method: Composition-based stats. Identities = 19/233 (8%), Positives = 55/233 (23%), Gaps = 14/233 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56 M + + ++ L ++ F + + +S T+ + + + Sbjct: 17 MFHFLRRAAQTWVAKLLLLLLVASFGVWGVSRELISGGNSTTVVTVGDQRVGVNEFHLAY 76 Query: 57 ---------SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 + L Q +E+ + +LI Q + + + Sbjct: 77 QRQVASLGQQFGMRLTPEQARAFGVEQQVLSQLIAGASLDQLAADMNLGLSEDRLAQLIG 136 Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG-NLEMEIPAN 166 ++ + + N + + V + + Sbjct: 137 DDPAFKAVNGQFDRELFVSRLRNANIHQDDYIKERSKVAVRSQIVDAVSNGFTAPKTLVD 196 Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219 K+ R + + + V + + R R P+ Sbjct: 197 AMKLYGDESRAVDYLLLTNANIEPIKAPADDVLATWFEGVKQRYRAPEYRKIA 249 >gi|229829771|ref|ZP_04455840.1| hypothetical protein GCWU000342_01868 [Shuttleworthia satelles DSM 14600] gi|229791760|gb|EEP27874.1| hypothetical protein GCWU000342_01868 [Shuttleworthia satelles DSM 14600] Length = 354 Score = 35.8 bits (80), Expect = 7.7, Method: Composition-based stats. Identities = 17/242 (7%), Positives = 52/242 (21%), Gaps = 11/242 (4%) Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 ++++ L + + +Q I+ + ++E+ L + Sbjct: 80 EQQVKETVADSLKQQYVARQHAADFNISISEEESKKIGEAADKFLAANSEEAVRQLGAER 139 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 F + ++ + E + S Sbjct: 140 DYVVRFFEDQYYYYHVEQALEGQADTTVSDEEA--------NQKKFSYVKFAFQSTDSST 191 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG--KAQYLLESDLHPQF 246 Q + + ++ ++ + + G Sbjct: 192 GKTSQVTEEQKAELMKQAKTLSTSADFDTTAKQMKQTVQTANYGKSDVGDKSYKLPQAVL 251 Query: 247 QNLLKKSQNNTTNPYVTQK-GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305 L ++ G + + D A K L + E+ ++ Sbjct: 252 TALEGMEVGKVSDVVTVDNDGYYVLRLDSLSDADATAAKKKTLENKKKTEHAEEVFKQWE 311 Query: 306 KK 307 + Sbjct: 312 NE 313 >gi|123477078|ref|XP_001321708.1| WW domain containing protein [Trichomonas vaginalis G3] gi|121904540|gb|EAY09485.1| WW domain containing protein [Trichomonas vaginalis G3] Length = 150 Score = 35.8 bits (80), Expect = 7.8, Method: Composition-based stats. Identities = 7/127 (5%), Positives = 30/127 (23%), Gaps = 3/127 (2%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 N + + + + + ++ +++ +++ + Sbjct: 20 YYYNKVTNETTWIRPIPYPGNKPNRANEWPPIIYVAQIYIKHGPMDESKEKIKRIFRQIV 79 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD---LHPQFQNLLKKSQNNTTNPYVT 263 + + + I G ++ +D + + T Sbjct: 80 FENKSFEEMVQQESEQCPDIQTDPNGDVGWIESTDPRFTKEYIKAAWDLRIGEMSTYINT 139 Query: 264 QKGVEYI 270 + G I Sbjct: 140 EHGYFII 146 >gi|332027517|gb|EGI67594.1| Protein lava lamp [Acromyrmex echinatior] Length = 3567 Score = 35.8 bits (80), Expect = 8.0, Method: Composition-based stats. Identities = 22/191 (11%), Positives = 52/191 (27%), Gaps = 2/191 (1%) Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEK 92 +I T N + IT ++ R+A L+ + + EK + I E + Sbjct: 1533 LAQSEKMKKIVATFNKKKITCQELEARVAELEEKWTTEKDEKEVKNKQIQEVEISMREKD 1592 Query: 93 SGITFDSNTVNYFFVQHARN--TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150 + I + A E S+ L ++ + + Sbjct: 1593 NKIHDLEEKLLQAKNDTAEILANSEKFEKESTSLKEKIGILMEHVAEMDEEIEKQRTEIE 1652 Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210 L+ + ++ + + D + + R++ E + Sbjct: 1653 RISLEVIIEKTAKEDIIKEYEIYKQTASKEDEQKQIVLDEVKEQARELSVRMQVMENEYV 1712 Query: 211 RLPKDCNKLEK 221 + L+ Sbjct: 1713 QQLATIKNLKA 1723 >gi|306826547|ref|ZP_07459856.1| peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes ATCC 10782] gi|304431274|gb|EFM34274.1| peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes ATCC 10782] Length = 316 Score = 35.8 bits (80), Expect = 8.0, Method: Composition-based stats. Identities = 30/315 (9%), Positives = 83/315 (26%), Gaps = 25/315 (7%) Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64 + D ++ ++ V +S + ++ ++ G+ IT D Sbjct: 1 MRKEAQDMKQMNKLITGVVTLATVVTLSACQSSHNNTKLVSMKGDTITVSDFYNETK--- 57 Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124 N EL + A+ L++ + + + + +A+ + + Sbjct: 58 ----NTELAQKAMLSLVISRVFETQYANKVSDKEVEKAYKQ----------TADQYGTSF 103 Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184 + Q +V+ + N + +Q T Sbjct: 104 KTVLAQSGLTPETYKKQIRLTKLVEYAVKEQAKNETISKKDYRQAYDAYTPTMTA----- 158 Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 + K ++ + +K + K+ + S Sbjct: 159 EIMQFEKEEDAKAALEAVKAEGADFAAIAKEKTIAADKKTTYTFDSGETILPAEVVRAAS 218 Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIE--KHE 301 + + +P +++ I + K + A + L K++ + Sbjct: 219 GLKEGNRSEIITALDPATSKRTYHIIKVTKKATKKADWKAYQKRLKDIIVTGKLKDPDFQ 278 Query: 302 AEYVKKLRSNAIIHY 316 + + K A + Sbjct: 279 NKVIAKALDKANVKI 293 >gi|254701881|ref|ZP_05163709.1| rotamase family protein [Brucella suis bv. 5 str. 513] gi|261752444|ref|ZP_05996153.1| rotamase [Brucella suis bv. 5 str. 513] gi|261742197|gb|EEY30123.1| rotamase [Brucella suis bv. 5 str. 513] Length = 628 Score = 35.8 bits (80), Expect = 8.0, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 63/263 (23%), Gaps = 12/263 (4%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----I 56 M + ++ +I L +++ F I I M+ T ++ D Sbjct: 1 MLDSLRSAAQSWIAKLLLGLLVLSFAIWGISDVFRGGMAGNAALTAGDSEVSATDYRFAY 60 Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116 +++ L Q + A + + Q + + + Q A + Sbjct: 61 EQQLMRLSQQFRQRLTREQAKAIGVENQVLAQLAAGVVLDEAACNMQLGLSQDAIARLTA 120 Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176 + D ++N + +E + K+ + ++ Sbjct: 121 EDPAFHDAGGNFNRARFDAVLRQSGIRAEDYLENRAKVARRQQIVEAATDGMKLPDTMLK 180 Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236 + D +E+ E K Y Sbjct: 181 ALALYQGESRSADYIDVPAEKADAIPAPSEDVLKAY------FEAHKEDYKAPEYRKISY 234 Query: 237 LLESDLHPQFQNLLKKSQNNTTN 259 + + +Q+ + Sbjct: 235 VKLE--PSDIADPAAVTQDEISE 255 >gi|226329058|ref|ZP_03804576.1| hypothetical protein PROPEN_02961 [Proteus penneri ATCC 35198] gi|225202244|gb|EEG84598.1| hypothetical protein PROPEN_02961 [Proteus penneri ATCC 35198] Length = 114 Score = 35.8 bits (80), Expect = 8.0, Method: Composition-based stats. Identities = 7/49 (14%), Positives = 16/49 (32%) Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 I + D +++ E+ ++ L+ NA I + Sbjct: 61 LIQLDSVTDGKPTSEQLEFMTNLYRAQMGEEALQLMLRDLKDNAKIEIF 109 >gi|261401823|ref|ZP_05987948.1| conserved hypothetical protein [Neisseria lactamica ATCC 23970] gi|269208030|gb|EEZ74485.1| conserved hypothetical protein [Neisseria lactamica ATCC 23970] Length = 252 Score = 35.8 bits (80), Expect = 8.0, Method: Composition-based stats. Identities = 12/166 (7%), Positives = 45/166 (27%), Gaps = 9/166 (5%) Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206 V + + E ++ + ++ E Q + + A+ Sbjct: 86 VQNRFKIAEASFYAQEYVRFLERSETVSESELRQFYERQIRMIKLQQVGFATEDEARQAQ 145 Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTT-NPYVTQ 264 + L+ ++++ + +++ L + ++ + T +P Sbjct: 146 QLLLKGLSFEGLMKRYPNDEQAFDS----FIMAQQLPEPLASRFAAMNRGDVTRDPVKLG 201 Query: 265 KGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307 + + + D ++ L K +++ Sbjct: 202 ERYYLFKLSEIGKNPDAQPFELVRNQLEQGLRQEKARLKVDALLEE 247 >gi|189184244|ref|YP_001938029.1| peptidyl-prolyl cis-trans isomerse D [Orientia tsutsugamushi str. Ikeda] gi|189181015|dbj|BAG40795.1| peptidyl-prolyl cis-trans isomerse D [Orientia tsutsugamushi str. Ikeda] Length = 517 Score = 35.8 bits (80), Expect = 8.1, Method: Composition-based stats. Identities = 28/228 (12%), Positives = 67/228 (29%), Gaps = 13/228 (5%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVS-YKSWAMSSRIRTTINGEVITDGDISKR 59 M +K+ T+ + +++ I + + S SS I T + IT + + Sbjct: 1 MLNKLRTASHSIAFKILILILILASVFWSIGTMFHSSNNSSDIVTFTKAKNITKSEFMQA 60 Query: 60 IALLKLQKI---------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110 + L Q + ++ + LI + +Q + +T + V F Sbjct: 61 LKLAMHQIPQNSDQNLLTQNNIRELVLSNLISTHVLEQLAHEYNLTLSTAAVFKFIQNSK 120 Query: 111 RNTGLSA---EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167 F + L I + + A Q + +++ Y + Sbjct: 121 AFNNNQNFDINIFRNILKNLHISEPQYFDQAAKQQLSEILLRQFINNNYVPSILTKNIIN 180 Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215 + ++ I + + + +S+ P+ Sbjct: 181 LSAETRNIQLVSIDLQNEQLQSTLDSPSSEQLQEFYNNNQSKFEKPEQ 228 >gi|326778877|ref|ZP_08238142.1| putative lipoprotein [Streptomyces cf. griseus XylebKG-1] gi|326659210|gb|EGE44056.1| putative lipoprotein [Streptomyces cf. griseus XylebKG-1] Length = 218 Score = 35.8 bits (80), Expect = 8.5, Method: Composition-based stats. Identities = 16/133 (12%), Positives = 40/133 (30%), Gaps = 11/133 (8%) Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK-----------LQKINGELEKIAV 77 P++S + GE I + R A ++ L +G+L + + Sbjct: 20 PLLSACGNQSHPGAAAVVGGERIEVSTVQDRAADVRSAQENSPEAAQLVNKSGQLNRAKL 79 Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137 LI + + +G+ + G + L ++ + + Sbjct: 80 HGLIFGRILDRAAADAGVAVTRKEIQEMRKASGAQQGGEERFEAMMLQQRWVAPDQIDAD 139 Query: 138 LAIQSIWPDVVKN 150 + + P + + Sbjct: 140 MRQEVQLPKLAEA 152 >gi|332829601|gb|EGK02247.1| hypothetical protein HMPREF9455_01517 [Dysgonomonas gadei ATCC BAA-286] Length = 288 Score = 35.8 bits (80), Expect = 8.7, Method: Composition-based stats. Identities = 36/316 (11%), Positives = 76/316 (24%), Gaps = 41/316 (12%) Query: 13 IKLLTTYFVLIIFCIVPIV-SYKSWAMSSRI---RTTINGEVITDGDISKRIALLKLQKI 68 +K + L V S A + R T+ + + D+ + I + + Sbjct: 1 MKKILICLHLFFMVFVAFSCSGSGAADADRALNPIVTVGDKTLYQADLDEVIPIGLSAED 60 Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128 + K D + A ++ +D ++ Sbjct: 61 STAAVK--------------------SYIDMWVNDQLIYNKALQNIINKKDIDELVEGYK 100 Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 ++K F E++ + K K + L Sbjct: 101 KSLITSSYQ-------EQLLKEYFSKSVSENELKAYYEQNKDKFKLEDNIIKGLYLKIPV 153 Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248 ++K + + + +LE+ Sbjct: 154 NSKQLANFQKWYKQGNDAAIENIEKNTLQNAVAYEYFYDKWVG--LVDVLENMPPAVTDE 211 Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA---LKAYLSAQNTPTKIEKHEAEYV 305 + +N + V + I + G E +K LS K + + Sbjct: 212 KIFLQRNKNLELRDSSF-VYLLNIKEYELTGSEAPYDYVKGQLSEMYMEQKKADYLQQVK 270 Query: 306 KKLRSNAI----IHYY 317 K L A+ I +Y Sbjct: 271 KDLYDKAVSDEEIKFY 286 >gi|256843213|ref|ZP_05548701.1| DNA-entry nuclease [Lactobacillus crispatus 125-2-CHN] gi|312977441|ref|ZP_07789189.1| prophage Lp1 protein 65 [Lactobacillus crispatus CTV-05] gi|256614633|gb|EEU19834.1| DNA-entry nuclease [Lactobacillus crispatus 125-2-CHN] gi|310895872|gb|EFQ44938.1| prophage Lp1 protein 65 [Lactobacillus crispatus CTV-05] Length = 284 Score = 35.8 bits (80), Expect = 8.7, Method: Composition-based stats. Identities = 18/195 (9%), Positives = 51/195 (26%), Gaps = 14/195 (7%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD--ISKRIALLKLQKINGE 71 K + T +F + + ++S + + + I D K+ + + E Sbjct: 5 KKIITLVSSTLFLFGGYGAITNPSLSQNVIAKV--KTIIKYDHSAEKKTKQIAQENKQTE 62 Query: 72 LEKIAVQELIVETLKKQEIEKSGITF---------DSNTVNYFFVQHARNTGLSAEDFSS 122 + +++ + I + K+ + N + N ++ S Sbjct: 63 KKIVSLDKKIAKLRKELKKYTGKHNIESVSAAKLASLNYSGKNIITVNNNDPSFSKSDLS 122 Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182 + + + ++++ M + + K + R Sbjct: 123 TNRGAWQEYGNLDGLNRVTAANALLIQS-LMPSARREPLHVDPTGWHNKRVAGGWLYNRC 181 Query: 183 VLFSIPDNKLQNQGF 197 L N Sbjct: 182 HLIGYQLTGQNNNIK 196 >gi|90578654|ref|ZP_01234464.1| hypothetical protein VAS14_03093 [Vibrio angustum S14] gi|90439487|gb|EAS64668.1| hypothetical protein VAS14_03093 [Vibrio angustum S14] Length = 269 Score = 35.8 bits (80), Expect = 8.9, Method: Composition-based stats. Identities = 17/171 (9%), Positives = 55/171 (32%), Gaps = 16/171 (9%) Query: 1 MTSKVFTSLSDFIK-LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR 59 M KV L FI+ + + + + Y S +N +T + ++ Sbjct: 1 MFKKVCYWLKRFIQDPFSHFLIAGTVLFIGYSQYYSSTS-------VNTISVTPSQVQQQ 53 Query: 60 IALLKL--------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111 L +N ++ + +++++ + K +EK + + + ++ Sbjct: 54 KKDDTLYFGSPPSSTALNKDINHVVLKQMLSQQALKLGLEKGDPNLNEMLMQRYLSYVSQ 113 Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162 ++A + + +K + + + +++ + Sbjct: 114 LAKINATNTTLLHQYYLTHKQRYKHPDMYSLCYHFLTPQEVQHPISSMDYQ 164 >gi|323141954|ref|ZP_08076810.1| conserved domain protein [Phascolarctobacterium sp. YIT 12067] gi|322413568|gb|EFY04431.1| conserved domain protein [Phascolarctobacterium sp. YIT 12067] Length = 227 Score = 35.8 bits (80), Expect = 9.0, Method: Composition-based stats. Identities = 21/176 (11%), Positives = 47/176 (26%), Gaps = 7/176 (3%) Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72 +K L V + +V + A + +NG T ++ + + K L Sbjct: 1 MKRLKVVLVACLAMLVAFTALAWAATQYKTTIKVNG---TKLNVQRYVEGKGPMKDKAVL 57 Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132 +V K++E++K D + F L + Sbjct: 58 LN--KDNKVVVRWKQRELKKWYY--DGDKYFRFVPYSYDMKNLKPGRYRLVTTSSFGKGG 113 Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188 K+ + I ++ ++ KN + + + Sbjct: 114 AVKKTVNISYKPQSKMQFRASKIIRKGNGDVYQRLYFKKNNSTGKTCYAQIFNKNN 169 >gi|317011211|gb|ADU84958.1| hypothetical protein HPSA_04905 [Helicobacter pylori SouthAfrica7] Length = 487 Score = 35.8 bits (80), Expect = 9.0, Method: Composition-based stats. Identities = 33/313 (10%), Positives = 85/313 (27%), Gaps = 20/313 (6%) Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60 M + + + + I + S+++ S + I+ ++++ Sbjct: 1 MIEWMQNHRKYLVVTIWISTIAFIAAGMIGWGQYSFSLDSNSAAKVGQIKISQEELAQEY 60 Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120 LK + +EL E +K +EKS + A + GL A Sbjct: 61 RRLKDAYAESIPD---FKELTEEQIKAMHLEKSA--LNILINQALLRNLALDLGLGATKQ 115 Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180 + + + + +N + K+ +E QK+ + + Sbjct: 116 EIAKEIRKTSVFQKDGVFDEELYKNILKQNHYRPKHFEESVEKLLIVQKISALFPKTTTP 175 Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEES---RLRLPKDCNKLEKFASKIHDVSIGKAQYL 237 KLQ++ + + + K +K K + Sbjct: 176 LEQSSLSLWAKLQDKLDILILKPSDVKISLNEEEMKKYYESHKKDFKKPTSFKTRSLYFD 235 Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297 + + ++N + + + L +++ + + K Sbjct: 236 ANLEKSDLKELEEYYNKNKAS------------YLDKEGKLQDFKSVQEQVKHDLSMQKA 283 Query: 298 EKHEAEYVKKLRS 310 + L+ Sbjct: 284 NEKALRSYIALKK 296 >gi|257464029|ref|ZP_05628414.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. D12] gi|317061550|ref|ZP_07926035.1| predicted protein [Fusobacterium sp. D12] gi|313687226|gb|EFS24061.1| predicted protein [Fusobacterium sp. D12] Length = 549 Score = 35.8 bits (80), Expect = 9.1, Method: Composition-based stats. Identities = 23/173 (13%), Positives = 55/173 (31%), Gaps = 5/173 (2%) Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203 + V + E+E+ + N + I + + + ++ Sbjct: 272 YAKVFFEKLKSEVQVDELELSKFFKANHNRYNQHASIDVNVAVLKIAASKEDIAAIEKKA 331 Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSI-GKAQYLLESDLHPQFQNLLKKSQNNTTNP-- 260 + L E+ K D I + + + + +F+ S+ P Sbjct: 332 EEILQGLTKENFAKTGEELQKKSTDTVIYEELGWFEKGAMVKEFEEAAFSSKEAQIYPKV 391 Query: 261 YVTQKGVEYIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSN 311 TQ G + I + ++ + A L +++Q++ K + +KL Sbjct: 392 ISTQFGKHLLYIQEVQENKVKAAHILFREVASQDSIAKSLREAETMKEKLDKK 444 >gi|167766180|ref|ZP_02438233.1| hypothetical protein CLOSS21_00674 [Clostridium sp. SS2/1] gi|167712260|gb|EDS22839.1| hypothetical protein CLOSS21_00674 [Clostridium sp. SS2/1] gi|291560116|emb|CBL38916.1| PPIC-type PPIASE domain [butyrate-producing bacterium SSC/2] Length = 369 Score = 35.8 bits (80), Expect = 9.1, Method: Composition-based stats. Identities = 26/238 (10%), Positives = 64/238 (26%), Gaps = 3/238 (1%) Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN-TGLSAEDFSSFLDK 126 +++ +I + + + + ++ Q + T + + + K Sbjct: 81 KKITMQQSVKDSVINQLKQIKVLAAHADDYNVKLTKSEKKQIKESVTAFAKDSTGKKVMK 140 Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186 + D Q L +S V + K + A K+ + + Sbjct: 141 KTEADKDMIQKLYEESTIASKVMQAIIKKANVTVTDDEAKTVKVYKLVFTTKTTDSKTGK 200 Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246 D + K+ K A + + + +KF+ + Sbjct: 201 EKDMTAAEKKDQLKKAKSALKMIKKGQSISSVAKKFSVNSDNEESYTKGKAALGT--KFE 258 Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304 K +N + I + + D + K+ L + EK ++ Sbjct: 259 TAAAKLKKNQVSGVVELDDAYVIIKMLNPNDTTAAASNKSTLLQEKQQAAYEKVYKKW 316 >gi|166797011|gb|AAI59135.1| LOC100145182 protein [Xenopus (Silurana) tropicalis] Length = 2002 Score = 35.8 bits (80), Expect = 9.4, Method: Composition-based stats. Identities = 27/264 (10%), Positives = 73/264 (27%), Gaps = 10/264 (3%) Query: 53 DGDISKRIALLKLQKINGELEKIAV--QELIVETLKKQEIEKSGITFDSNTVNYF-FVQH 109 K L+L + V + +QE+++ + ++ Sbjct: 1357 KAQAEKEARELRLNMQEEVSRREVVAVDAEQQKKTIQQELQQLKQNSEMEIKTKAKLIEE 1416 Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169 A E+ + Q K + + + + E +++ Sbjct: 1417 AEINRTKVEEEIRIIRLQLETSQKQKSGAENELRELRARAEEAERQKRLAQEEAERLRKQ 1476 Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229 +K+ T+++ L + QK + D E+ RL + ++++ + Sbjct: 1477 VKDETLKKREAEEELQRKVQAERDAAREKQKAMDDLEKFRLLAEEAERRMKQAEFEKERQ 1536 Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289 + ++ Q + + T + + + + Sbjct: 1537 -------IKQAQDVAQQSADAELQSKRMSFLEKTTQLEMSLKQEHITVTHLQEEAERLKK 1589 Query: 290 AQNTPTKIEKHEAEYVKKLRSNAI 313 Q K + + ++K R A Sbjct: 1590 QQLEAEKAREDAEKELEKWRQKAN 1613 >gi|297620505|ref|YP_003708642.1| hypothetical protein wcw_0261 [Waddlia chondrophila WSU 86-1044] gi|297375806|gb|ADI37636.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044] Length = 788 Score = 35.8 bits (80), Expect = 9.4, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 26/73 (35%), Gaps = 2/73 (2%) Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTT-INGEVITDGDISKR 59 +F F+ L+ T ++I F S A + + ++G + ++ + Sbjct: 1 MLAIFRKYQRFLYLVITCVIVISFSFFGTYSGLQNAQPADKTVFQAVDGSDVARSELEEM 60 Query: 60 IALLKLQKINGEL 72 A + + L Sbjct: 61 AAFIGTDNEDKML 73 >gi|294509086|ref|YP_003565975.1| hypothetical protein BMQ_pBM70172 [Bacillus megaterium QM B1551] gi|294352390|gb|ADE72712.1| conserved hypothetical protein [Bacillus megaterium QM B1551] Length = 434 Score = 35.8 bits (80), Expect = 9.4, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 40/114 (35%), Gaps = 3/114 (2%) Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73 L + + ++ S K ++ + ++ +NG+ I D++ LL+ + + + Sbjct: 3 NKLYNVILYSLIIVLGFFSLKYFSTNYQVVAEVNGKEIHKKDVN---KLLEDKYFDNARD 59 Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127 Q+LI K + +S + A + + +F Sbjct: 60 NYIDQQLIDLEKAKINPPTNKQLKESFRYYQLVDRKATDLESKKGEVGNFYYNN 113 >gi|149372556|ref|ZP_01891668.1| hypothetical protein SCB49_11829 [unidentified eubacterium SCB49] gi|149354599|gb|EDM43163.1| hypothetical protein SCB49_11829 [unidentified eubacterium SCB49] Length = 283 Score = 35.8 bits (80), Expect = 9.6, Method: Composition-based stats. Identities = 25/304 (8%), Positives = 80/304 (26%), Gaps = 39/304 (12%) Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74 ++ F++ F ++ +N + + DI+ + + + + + Sbjct: 1 MVKWIFLIGCFFVLSSCDLLEGKDDRTPVARVNNNFLYEEDIAYLVDNIISSEDSAVV-- 58 Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134 V+ + + A L ++ + ++Q + Sbjct: 59 ---------------------------VSSYINEWATEELLVSQALINISEEQQQQYDKL 91 Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194 + + + ++ + + K+ T + + N Sbjct: 92 VRQYKVSLLTEAYKNTMVSRDLDSVISQEEIDTLYNKDKTSFLLNDDLLKIRYVQLEEDN 151 Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL---HPQFQNLLK 251 + + + +F + V++ + ++ + L P F+N Sbjct: 152 TNVSEIKKLLKNYESSDKIALLDMALQFKT----VNLNDSVWIKKEVLFSRVPVFKNQDI 207 Query: 252 KSQNNTTNPYVTQKGVEYIAICD---KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308 + G+ + D K D+ + L + + K + Sbjct: 208 NLTSGRFAEIKDSTGIYVYKVEDRLNKGDIAPSAFIAPTLRQIILNRRKLELIRNIEKDI 267 Query: 309 RSNA 312 +A Sbjct: 268 TKDA 271 >gi|220928515|ref|YP_002505424.1| hypothetical protein Ccel_1085 [Clostridium cellulolyticum H10] gi|219998843|gb|ACL75444.1| hypothetical protein Ccel_1085 [Clostridium cellulolyticum H10] Length = 209 Score = 35.8 bits (80), Expect = 9.7, Method: Composition-based stats. Identities = 18/154 (11%), Positives = 44/154 (28%), Gaps = 4/154 (2%) Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91 S I TINGE IT + A++ + + K + ++ + + Sbjct: 44 SQTLTKAGKDIVATINGENITKKGFNTYKAMINSENKLSD--KEILDRIVESHVVYTQAV 101 Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG--IGDNHFKQYLAIQSIWPDVVK 149 K G + V + ++ + +F + + +++ Sbjct: 102 KEGFRVSDHQVEAAIKSAREEISMDSKQYKAFKEYISGLKMSEDEYWESVKPTYKKALIR 161 Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183 + ++ N E+ R + Sbjct: 162 GAYKNALKQKFKKVKLEDPNEVNSKFSEFYDREI 195 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.307 0.103 0.238 Lambda K H 0.267 0.0316 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,370,284,185 Number of Sequences: 14124377 Number of extensions: 36813121 Number of successful extensions: 433097 Number of sequences better than 10.0: 7286 Number of HSP's better than 10.0 without gapping: 3655 Number of HSP's successfully gapped in prelim test: 3631 Number of HSP's that attempted gapping in prelim test: 416068 Number of HSP's gapped (non-prelim): 12122 length of query: 317 length of database: 4,842,793,630 effective HSP length: 139 effective length of query: 178 effective length of database: 2,879,505,227 effective search space: 512551930406 effective search space used: 512551930406 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 80 (35.8 bits)