HHsearch alignment for GI: 254780397 and conserved domain: COG0280

>COG0280 Pta Phosphotransacetylase [Energy production and conversion].
Probab=98.88  E-value=1.3e-07  Score=66.03  Aligned_cols=290  Identities=15%  Similarity=0.156  Sum_probs=179.1

Q ss_pred             CCCEEEECCCCCCCCHHHHHHHHCCCCHHCCCCEEEECCHHHHHHHHHHCCCCCCE-EECCCCHHCCCCCCCEEEECCCC
Q ss_conf             88389971898774789999984285232489899993999999999981899744-75386101112678537610333
Q gi|254780397|r    4 FLPLILTQGDPAGIGPDISLKAWASRQITAIPPFIYIGDVDVLNARAKQLNLSVPL-YETDCKNAVSIFKKALPIISSPC   82 (343)
Q Consensus         4 ~~pI~IT~GDPaGIGpEIilKal~~~~~~~~~~~viigd~~~l~~~~k~l~~~~~i-~~i~~~~~~~~~~~~i~i~~~~~   82 (343)
T Consensus        13 ~kriv~~Ege-----d~rvl~Aa~~~~~~g~~~~ilvg~~~~i~~~~~~~gl~l~~~eiidp~~~~~~~~~y~~~~----   83 (327)
T COG0280          13 PKRIVLPEGE-----EERVLRAAQVLAKEGLAKPILVGRPEEIEEVAKALGLDLDGIEIINPELDPERFEEYVDRL----   83 (327)
T ss_pred             CCEEEECCCC-----CHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHH----
T ss_conf             8769816874-----3799999999986597752897489999999998354656447867222706689999999----


Q ss_pred             CCCCCCCCCCCCCCHHHH--HHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCC-CCC
Q ss_conf             220013553100000246--77887766430123430443223447776410132564789999834235886652-112
Q gi|254780397|r   83 GAKIVTGTPNPQTASSTI--ANIEKAVSLTLSGQALAIVTNPIAKFLLYQEKFKFPGHTEFLAELAKKNTGITFKP-VMM  159 (343)
Q Consensus        83 ~~~~~~G~~s~~~g~~~~--~sl~~A~~l~~~g~~~alVT~PInK~~l~~aG~~f~GhTE~La~~~~~~~~~~~~~-~Ml  159 (343)
T Consensus        84 ~e~~k~kG~t~~~a~~~~~~d~~~~a~~mv~~g~aD~~v~G~~~tt~---------~~lr~~lqii~~~pG~~~~s~v~i  154 (327)
T COG0280          84 YELRKRKGVTPEDAQELVREDPTVFAAMMVALGEADGLVSGAVHTTA---------DTLRPALQIIGTRPGVSLVSSVFI  154 (327)
T ss_pred             HHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHH---------HHHHHHHHHHCCCCCCEEEEEEEE
T ss_conf             99964379999999988544808999999975988789755766779---------899889987088898766787899


Q ss_pred             CCCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             33221126653045313334320102456788898999998531345670799963665445310000121024458886
Q gi|254780397|r  160 LSGPQLRTVPVTIHIPIADICRILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITY  239 (343)
Q Consensus       160 l~~~~L~V~l~TtHiPLk~V~~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~  239 (343)
T Consensus       155 m~~~~~~l~~~D~avn-----~~PtaeeladIa~~sa~~a~-~fgi-~PkVAlLS~----St~gs~~~~~~~kv~ea~~i  223 (327)
T COG0280         155 MLLPDGTLFFADCAVN-----PDPTAEELADIAENAAETAR-RFGI-EPKVALLSY----STFGSGKGPSTDKVREATKI  223 (327)
T ss_pred             EEECCCEEEEEECCCC-----CCCCHHHHHHHHHHHHHHHH-HHCC-CCEEEEEEE----ECCCCCCCCCHHHHHHHHHH
T ss_conf             9937960899713357-----89799999999999999999-8089-870689975----42788888107999999999


Q ss_pred             HHHC---CCCCCCCCCCHHHEECC----------CCCCCCEEEEEECCHHHHHHHHHC-CCCEEE---EEEE--CCEEEE
Q ss_conf             4215---87643455511210002----------236676899985120225555414-477279---9920--876475
Q gi|254780397|r  240 LRND---NKNIIGPLPADSMFHHS----------ARQCYDVAICMYHDQALIPIKTLD-FNQTVN---ITLG--LPFVRT  300 (343)
Q Consensus       240 ~~~~---g~~v~GP~paDt~F~~~----------~~~~~D~vlamYHDQglip~K~l~-f~~~Vn---~t~G--Lp~irt  300 (343)
T Consensus       224 ~~~~~~~dl~vDGelq~DaA~~~~va~~k~p~s~vaG~ANvlVfP~LeagNI~yK~lq~~~~a~avGPil~G~~kPV~~l  303 (327)
T COG0280         224 LRERAPPDLEVDGELQFDAALVEKVAAKKAPDSPLAGSANVLVFPDLEAGNIGYKLLQRLGGALAVGPILQGLAKPVNDL  303 (327)
T ss_pred             HHHCCCCCCEECCCCCHHHHCCHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCEECHHHHCCCCCHHHC
T ss_conf             97169756666067524355399999953899976787778974882177789999999537855600242576653235


Q ss_pred             CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             5887552221336866838999999999999985
Q gi|254780397|r  301 SPDHGTAFDIAGSSLTQEESLVSALKIAAQLGYQ  334 (343)
Q Consensus       301 SpdHGTafdiagk~~a~~~s~~~ai~~a~~~~~~  334 (343)
T Consensus       304 Srg------------~sv~dIvn~~alaa~qa~~  325 (327)
T COG0280         304 SRG------------ASVEDIVNMAALAAVQAQT  325 (327)
T ss_pred             CCC------------CCHHHHHHHHHHHHHHHHC
T ss_conf             888------------9889999999999998623