HHsearch alignment for GI: 254780397 and conserved domain: PRK12861

Probab=98.75  E-value=2.1e-07  Score=64.85  Aligned_cols=265  Identities=15%  Similarity=0.203  Sum_probs=164.0

Q ss_pred             CCCEEEECCCCCCCCHHHHHHHHCCCCHHCCCCEEEECCHHHHHHHHHHCCCCCC----EEECCCCHHCCCCCCCEEEEC
Q ss_conf             8838997189877478999998428523248989999399999999998189974----475386101112678537610
Q gi|254780397|r    4 FLPLILTQGDPAGIGPDISLKAWASRQITAIPPFIYIGDVDVLNARAKQLNLSVP----LYETDCKNAVSIFKKALPIIS   79 (343)
Q Consensus         4 ~~pI~IT~GDPaGIGpEIilKal~~~~~~~~~~~viigd~~~l~~~~k~l~~~~~----i~~i~~~~~~~~~~~~i~i~~   79 (343)
T Consensus       446 pKRIVFaEGEd-----eRVLRAAq~~~dEGia~PILIGr~e~I~~~i~~lGL~L~~~~dieIiDP~~s~r~-~~Ya~~y-  518 (762)
T PRK12861        446 KARIVFTEGED-----ERVLRAVQVIVDEKLARPILVGRPEVLLARIERFGLRLRLGQDVEVTNPEYDERF-PQYWTTY-  518 (762)
T ss_pred             CCEEEECCCCC-----HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH-HHHHHHH-
T ss_conf             74699248877-----6899999999974984289972999999999981999665666530178865048-9999999-


Q ss_pred             CCCCCCCCCCCCCCCCCH-HHHHH-HHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC-CC
Q ss_conf             333220013553100000-24677-8877664301234304432234477764101325647899998342358866-52
Q gi|254780397|r   80 SPCGAKIVTGTPNPQTAS-STIAN-IEKAVSLTLSGQALAIVTNPIAKFLLYQEKFKFPGHTEFLAELAKKNTGITF-KP  156 (343)
Q Consensus        80 ~~~~~~~~~G~~s~~~g~-~~~~s-l~~A~~l~~~g~~~alVT~PInK~~l~~aG~~f~GhTE~La~~~~~~~~~~~-~~  156 (343)
T Consensus       519 --~elrqRKG-vt~~~Ar~~vr~~~n~FgAmMV~~GdADgMV~G~t~---------~ya~~LrpalqVIG~~pg~~~vs~  586 (762)
T PRK12861        519 --WELRCRDG-ISKEMARVEMRRRLTLIGAMMVRLGDADGMICGTVG---------EYHNHLRFVDEVIGRKPGASTYAA  586 (762)
T ss_pred             --HHHHHCCC-CCHHHHHHHHHCCCCCHHHHHHHCCCCCEEECCCCC---------CHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf             --99975279-989999999735851067879873887778437887---------709999999996188999844788


Q ss_pred             CCCCCCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHH
Q ss_conf             11233221126653045313334320102456788898999998531345670799963665445310000121024458
Q gi|254780397|r  157 VMMLSGPQLRTVPVTIHIPIADICRILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPA  236 (343)
Q Consensus       157 ~Mll~~~~L~V~l~TtHiPLk~V~~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~Pa  236 (343)
T Consensus       587 ~~lmi~~~~~lF~ADT~Vn-----~~PtAEqLAeIAi~aA~~ar-~fGi-ePRVAmLSfSnF----GS~~~~~~~KVreA  655 (762)
T PRK12861        587 MNILLLDQRTVALVDTHVN-----DNPDAEQIAEFTIAAARQME-WLNL-TPKVALLSRSNF----GSGSAASGVKMRRA  655 (762)
T ss_pred             EEEEECCCCCEEEEECCCC-----CCCCHHHHHHHHHHHHHHHH-HCCC-CCCEEEEECCCC----CCCCCCCHHHHHHH
T ss_conf             8899838962899726254-----58799999999999999999-8399-973899805789----99999715799999


Q ss_pred             HHHHHHC--CCCCCCCCCCHHHEECCCCC-C---------CCEEEEEECCHHHHHHHHHC-C-CCEEE---EEEECCEE
Q ss_conf             8864215--87643455511210002236-6---------76899985120225555414-4-77279---99208764
Q gi|254780397|r  237 ITYLRND--NKNIIGPLPADSMFHHSARQ-C---------YDVAICMYHDQALIPIKTLD-F-NQTVN---ITLGLPFV  298 (343)
Q Consensus       237 I~~~~~~--g~~v~GP~paDt~F~~~~~~-~---------~D~vlamYHDQglip~K~l~-f-~~~Vn---~t~GLp~i  298 (343)
T Consensus       656 veil~er~PdlevDGEMQ~DaAL~~~v~~~~~PfS~L~G~ANVLIfPnLdAANIaYKLlq~~~G~~vaIGPIL~Gl~KP  734 (762)
T PRK12861        656 LEIVREQAPDIEADGEMHGDCALDEGLRARLLPMSPLKGAANLLVCPNVDAGNIAYNLLKTEAGSNVAVGPFLLGVNAP  734 (762)
T ss_pred             HHHHHHHCCCCEEECCCCCCHHCCHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCEECHHHHCCCCC
T ss_conf             9999974899688337871410589999855818967787848988996178999999999639985556175568986