HHsearch alignment for GI: 254780397 and conserved domain: pfam04166
>pfam04166 PdxA Pyridoxal phosphate biosynthetic protein PdxA. In Escherichia coli the coenzyme pyridoxal 5'-phosphate is synthesized de novo by a pathway that is thought to involve the condensation of 4-(phosphohydroxy)-L-threonine and 1-deoxy-D-xylulose, catalysed by the enzymes PdxA and PdxJ, to form either pyridoxine (vitamin B6) or pyridoxine 5'-phosphate.
Probab=100.00 E-value=0 Score=787.17 Aligned_cols=297 Identities=39% Similarity=0.615 Sum_probs=284.9
Q ss_pred CCCHHCCCCEEEECCHHHHHHHHHHCCCCCCEEECCCCHHCCCCCCCEEEE-CCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 852324898999939999999999818997447538610111267853761-0333220013553100000246778877
Q gi|254780397|r 28 SRQITAIPPFIYIGDVDVLNARAKQLNLSVPLYETDCKNAVSIFKKALPII-SSPCGAKIVTGTPNPQTASSTIANIEKA 106 (343)
Q Consensus 28 ~~~~~~~~~~viigd~~~l~~~~k~l~~~~~i~~i~~~~~~~~~~~~i~i~-~~~~~~~~~~G~~s~~~g~~~~~sl~~A 106 (343)
T Consensus 2 ~kei~~~C~PVViGd~~lL~~~ak~lgl~~~i~~I~~~~~~~~~~~~i~~v~~~~~~~~~~~Gk~s~~~G~~~~~~l~~A 81 (299)
T pfam04166 2 AKELREKCTPVVIADEALLERAAKLLGLPLDLRDIEFVEPAQEEPAGLLVIDPLPLKVPVVAGEVSAASGAYVLETLARA 81 (299)
T ss_pred CHHHHCCCCEEEEECHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 86786289799998999999999982999538980875544225687689705656777788985889999999999999
Q ss_pred HHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCHH
Q ss_conf 66430123430443223447776410132564789999834235886652112332211266530453133343201024
Q gi|254780397|r 107 VSLTLSGQALAIVTNPIAKFLLYQEKFKFPGHTEFLAELAKKNTGITFKPVMMLSGPQLRTVPVTIHIPIADICRILSTK 186 (343)
Q Consensus 107 ~~l~~~g~~~alVT~PInK~~l~~aG~~f~GhTE~La~~~~~~~~~~~~~~Mll~~~~L~V~l~TtHiPLk~V~~~it~~ 186 (343)
T Consensus 82 v~~~~~g~~dalVT~PInK~~i~~ag~~f~GHTE~La~~~~~~-----~~~Mml~~~~LrV~lvTtHipLk~V~~~It~~ 156 (299)
T pfam04166 82 VALALDGEFDAIVTGPINKGALKDAGIPYSGHTEFLAERTGTH-----SVVMMLATGDLRVALVTTHIPLKDVPDAITFE 156 (299)
T ss_pred HHHHHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCC-----CEEEEEECCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 9999759988999797388999867999898689998763689-----73799964974899953465699999875199
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHEECCCCCCCC
Q ss_conf 56788898999998531345670799963665445310000121024458886421587643455511210002236676
Q gi|254780397|r 187 RIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLRNDNKNIIGPLPADSMFHHSARQCYD 266 (343)
Q Consensus 187 ~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~g~~v~GP~paDt~F~~~~~~~~D 266 (343)
T Consensus 157 ~I~~~i~~~~~~l~~~~gi~~PrIaV~gLNPHaGE~G~~G~EE~~iI~Pai~~~~~~gi~v~GP~paDt~F~~~~~~~~D 236 (299)
T pfam04166 157 LVEDFLRLLHKALREKFGIAEPRIAVAGLNPHAGEGGVLGREEIEEIIPALEQARAEGIDLLGPLPADTAFRPVLLGRYD 236 (299)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCC
T ss_conf 99999999999999964998980899944887665555641447888999999885499758897943776541105789
Q ss_pred EEEEEECCHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 899985120225555414477279992087647558875522213368668389999999999
Q gi|254780397|r 267 VAICMYHDQALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAA 329 (343)
Q Consensus 267 ~vlamYHDQglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~ 329 (343)
T Consensus 237 ~v~amYHDQglip~K~~~f~~~vn~t~GLp~irtS~dHGta~diagk~~A~~~s~~~Ai~~Aa 299 (299)
T pfam04166 237 AVLAMYHDQGLIPLKYLGFDRGVNVTLGLPIIRTSVDHGTAFDIAGKGKADPGSLIAALKLAA 299 (299)
T ss_pred EEEEECCCCCCHHHHHCCCCCCEEEECCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHC
T ss_conf 999805244207665335687379944899237789987056660789899699999999759