HHsearch alignment of GI: 254780397 and MMDB domain: 1vlc_A_
>1vlc_A (A:) 3-isopropylmalate dehydrogenase; TM0556, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima}
Probab=95.79 E-value=0.007 Score=37.30 Aligned_cols=135 Identities=14% Similarity=0.176 Sum_probs=82.2
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCCCHHHEEC
Q ss_conf 2010245678889899999853134567079996366544531000012102445888642158764-345551121000
Q gi|254780397|r 181 RILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLRNDNKNI-IGPLPADSMFHH 259 (343)
Q Consensus 181 ~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~g~~v-~GP~paDt~F~~ 259 (343)
+.+|++.+.+-++...+.-++. +++...|-==|=. .-+--+.. +..+.-++-.+| .-..-.|++...
T Consensus 169 ~~~tr~~~eri~~~Af~~A~~~---~~~vt~v~K~nv~--------~~~g~f~~-~~~eva~~~p~i~~~~~~vD~~~~~ 236 (366)
T 1vlc_A 169 MIYDRKTVERIARTAFEIAKNR---RKKVTSVDKANVL--------YSSMLWRK-VVNEVAREYPDVELTHIYVDNAAMQ 236 (366)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTT---TSEEEEEECTTTC--------HHHHHHHH-HHHHHHTTCTTSEEEEEEHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHHHHCC---CCEEEEEECCCCE--------ECCHHHHH-HHHHHHHHCCCEEEEEEEHHHHHHH
T ss_conf 9951488899999999998648---9738999457750--------02188999-9999996679848998629899999
Q ss_pred CC--CCCCCEEEE--EE----CCHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 22--366768999--85----1202255554144772799920876475588755222133686683899999999999
Q gi|254780397|r 260 SA--RQCYDVAIC--MY----HDQALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQ 330 (343)
Q Consensus 260 ~~--~~~~D~vla--mY----HDQglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~ 330 (343)
-. -.+||++|+ || .|.+..-.-.+++--+.|+. +---.-|-||||.||||+++|||.+|+-|.-+-++
T Consensus 237 lv~~P~~fdViv~~Nl~GDIlsD~~a~l~G~~G~~~sanig---~~~~fe~~HGsApdiaG~~~aNP~a~Ils~a~ML~ 312 (366)
T 1vlc_A 237 LILKPSQFDVILTTNMFGDILSDESAALPGSLGLLPSASFG---DKNLYEPAGGSAPDIAGKNIANPIAQILSLAMMLE 312 (366)
T ss_dssp HHHCGGGCSEEEECHHHHHHHHHHHTTSSSCGGGCEEEEES---SSEEEEESSCCCTTTTTTTCSCCHHHHHHHHHHHH
T ss_pred HHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHCCC---CHHEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 98666877589854177777778899985353202343148---30000026687124269986492999999999987