HHsearch alignment of GI: 254780397 and MMDB domain: 2d1c_A_1-370

>2d1c_A (A:1-370) Isocitrate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAP CIT; 1.80A {Thermus thermophilus HB8}
Probab=96.36  E-value=0.0026  Score=39.90  Aligned_cols=138  Identities=15%  Similarity=0.194  Sum_probs=84.7

Q ss_pred             HHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCCCHHHEEC
Q ss_conf             2010245678889899999853134567079996366544531000012102445888642158764-345551121000
Q gi|254780397|r  181 RILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLRNDNKNI-IGPLPADSMFHH  259 (343)
Q Consensus       181 ~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~g~~v-~GP~paDt~F~~  259 (343)
                      +.+|++.+.+-++...+.-++. +  +.|+-++ -..+.=..      =.-.-..+.++.-++..+| .-..-.|++..+
T Consensus       160 ~~~t~~~~eri~~~Af~~A~~~-~--rk~Vt~v-~K~nv~~~------t~g~f~~~~~~va~~~p~i~~~~~~vD~~~~~  229 (370)
T 2d1c_A          160 KLISWKGSEKIVRFAFELARAE-G--RKKVHCA-TKSNIMKL------AEGTLKRAFEQVAQEYPDIEAVHIIVDNAAHQ  229 (370)
T ss_dssp             EEEEHHHHHHHHHHHHHHHHHT-T--CCEEEEE-ECTTTCTT------HHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHH
T ss_pred             EEEEEECCCCEEEHHHHHHHHC-C--CCEEECC-CCCCHHHH------HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             3455420001120445689875-9--8434202-20012122------24778888764675579830000124788999


Q ss_pred             CC--CCCCCEEEE--EE----CCHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf             22--366768999--85----1202255554144772799920876475588755222133686683899999999999
Q gi|254780397|r  260 SA--RQCYDVAIC--MY----HDQALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQ  330 (343)
Q Consensus       260 ~~--~~~~D~vla--mY----HDQglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~  330 (343)
                      -.  -.+||++|+  ||    .|.+.--...+++--+.|+  |-..--.-|-||||.||||+++|||.+++.|.-+-++
T Consensus       230 lv~~P~~fdViv~~Nl~GDIlsD~aa~l~GslG~~~s~ni--g~~~a~fE~~HGsapdiaG~~~aNP~a~ils~ammL~  306 (370)
T 2d1c_A          230 LVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANI--GNEVAIFEAVHGSAPKYAGKNVINPTAVLLSAVMMLR  306 (370)
T ss_dssp             HHHCGGGCSEEEECHHHHHHHHHHHHTTTTCGGGCEEEEE--CSSCEEEEESSCCCTTTTTSSCCCCHHHHHHHHHHHH
T ss_pred             HHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCC--CCCCCEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf             9850245461211648888898788760687566664412--8974212222332154369886590999999999998