HHsearch alignment of GI: 254780397 and MMDB domain: 3dms_A_
>3dms_A (A:) Isocitrate dehydrogenase [NADP]; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia pseudomallei} PDB: 1pb1_A* 1ai3_A* 1ika_A* 1ai2_A* 1p8f_A* 1pb3_A 1sjs_A 3icd_A 4icd_A* 5icd_A* 9icd_A* 1bl5_A* 1cw7_A* 1idd_A 1ide_A* 1hj6_A* 7icd_A 8icd_A* 6icd_A 1cw1_A* ...
Probab=96.91 E-value=0.0017 Score=40.96 Aligned_cols=146 Identities=12% Similarity=0.066 Sum_probs=84.1
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH-------------HHHCCCCC
Q ss_conf 20102456788898999998531345670799963665445310000121024458886-------------42158764
Q gi|254780397|r 181 RILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITY-------------LRNDNKNI 247 (343)
Q Consensus 181 ~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~-------------~~~~g~~v 247 (343)
+.+|++.+.+-++...+.-++. + ++.-..|.==|=..--.|+|- |.-+.....--. ..++.-+|
T Consensus 209 ~~~tr~~~~Ri~~~Af~~A~~~-~-rk~vt~v~Kanv~~~~dg~f~-~~~~e~a~~~~~~~~~~~~~~~~~~v~~~yP~I 285 (427)
T 3dms_A 209 KPVSKEGTERLVRKAIQYAIDN-D-RKSVTLVHKGNIMKFTEGAFR-DAGYALAQKEFGAELIDGGPWMKFKNPKTGNEI 285 (427)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHT-T-CSEEEEEECTTTSTTTHHHHH-HHHHHHHHHHHCCEESTTSSCEEEECTTTCCEE
T ss_pred EECCHHHHHHHHHHHHHHHHHC-C-CCCEEEEECCCCEEHHHHHHH-HHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCE
T ss_conf 7604788899999999999966-9-984799837840012243899-999999999876764033202330366777865
Q ss_pred -CCCCCCHHHEEC--CCCCCCCEEEE--E----ECCHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCH
Q ss_conf -345551121000--22366768999--8----51202255554144772799920876475588755222133686683
Q gi|254780397|r 248 -IGPLPADSMFHH--SARQCYDVAIC--M----YHDQALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQE 318 (343)
Q Consensus 248 -~GP~paDt~F~~--~~~~~~D~vla--m----YHDQglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~ 318 (343)
.-..-.|++=.+ .+=..||++|+ | -.|.+..-.-.+++--+.|+ |.-.----|-||+|.|||||++|||
T Consensus 286 ~~~~~~vDa~~~~lv~~P~~fdViv~~Nl~GDIlSD~~a~l~GslG~~~s~ni--g~~~a~FEp~HGsApdiaG~~~aNP 363 (427)
T 3dms_A 286 VVKDSIADAFLQQILLRPAEYDVIATLNLNGDYISDALAAQVGGIGIAPGANL--SDSVAMFEATHGTAPKYAGKDYVNP 363 (427)
T ss_dssp EEEEEEHHHHHHHHHHCGGGCCEEEECHHHHHHHHHHHHHHTTCTTTCEEEEE--CSSCEEEEECSCCCGGGTTSSCSCC
T ss_pred EEEEHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCEEE--CCCCEEEECCCCCHHHHCCCCCCCC
T ss_conf 87536999999998329564657975416788998999986388565661221--7986688789887255479987692
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 8999999999999
Q gi|254780397|r 319 ESLVSALKIAAQL 331 (343)
Q Consensus 319 ~s~~~ai~~a~~~ 331 (343)
.+|+-|.-+-++-
T Consensus 364 ~A~Ils~amML~h 376 (427)
T 3dms_A 364 GSEILSAEMMLRH 376 (427)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999998