HHsearch results for GI: 254780397 and protein with PDBid: 1w0d_A
>1w0d_A 3-isopropylmalate dehydrogenase; oxidoreductase, leucine biosynthesis, NAD, structural genomics, PSI, protein structure initiative; 1.65A {Mycobacterium tuberculosis} SCOP: c.77.1.1 PDB: 2g4o_A
Probab=96.80 E-value=0.00071 Score=42.37 Aligned_cols=140 Identities=12% Similarity=0.130 Sum_probs=70.4
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCCCHHHEEC
Q ss_conf 2010245678889899999853134567079996366544531000012102445888642158764-345551121000
Q gi|254780397|r 181 RILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLRNDNKNI-IGPLPADSMFHH 259 (343)
Q Consensus 181 ~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~g~~v-~GP~paDt~F~~ 259 (343)
+.+|+..+.+-++...+.-++. ++....|-==|=..-=.|+|= -+.++.-++--++ .-..-.|++-..
T Consensus 149 ~~~t~~~~~RIar~Afe~A~~r---rk~vt~v~Kanv~~~t~glf~--------~~~~eva~~yp~i~~~~~~vD~~~~~ 217 (337)
T 1w0d_A 149 SVNTAFGVRRVVADAFERARRR---RKHLTLVHKTNVLTFAGGLWL--------RTVDEVGECYPDVEVAYQHVDAATIH 217 (337)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHT---TSEEEEEECTTTSHHHHHHHH--------HHHHHHHTTCTTSEEEEEEHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHHHHHC---CCCEEEEECCCCCHHHHHHHH--------HHHHHHHHHCCCCEEHHHHHHHHHHH
T ss_conf 6132677767789999999848---995699968872145779999--------99999886578734115758799998
Q ss_pred --CCCCCCCEEEE--EECC----HHHHHHHHHCCCCEEEEEEEC-CEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf --22366768999--8512----022555541447727999208-76475588755222133686683899999999999
Q gi|254780397|r 260 --SARQCYDVAIC--MYHD----QALIPIKTLDFNQTVNITLGL-PFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQ 330 (343)
Q Consensus 260 --~~~~~~D~vla--mYHD----Qglip~K~l~f~~~Vn~t~GL-p~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~ 330 (343)
.+-.+||++|+ ||=| ++-.-.=.++.--+.|+--.- .+----|-||||.||||||+|||.+|+-|.-+-++
T Consensus 218 lv~~P~~fdViv~~Nl~GDilSDlaa~l~GglGl~psan~g~~~~~~a~fEp~HGsapdiaGk~iaNP~a~ils~ammL~ 297 (337)
T 1w0d_A 218 MITDPGRFDVIVTDNLFGDIITDLAAAVCGGIGLAASGNIDATRANPSMFEPVHGSAPDIAGQGIADPTAAIMSVALLLS 297 (337)
T ss_dssp HHHCGGGCSEEEECHHHHHHHHHHHHHHTTCGGGCEEEEECTTCSSCEEEEESSCCCGGGTTSSCSCCHHHHHHHHHHHH
T ss_pred HCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 62598537679875156788999998861865325666667431331000356665054469996495999999999999
Q ss_pred H
Q ss_conf 9
Q gi|254780397|r 331 L 331 (343)
Q Consensus 331 ~ 331 (343)
-
T Consensus 298 ~ 298 (337)
T 1w0d_A 298 H 298 (337)
T ss_dssp H
T ss_pred H
T ss_conf 8