HHSEARCH alignment of GI: 254780397 and SCOP domain: d1a05a_

Alignment
>d1a05a_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thiobacillus ferrooxidans [TaxId: 920]}
Probab=96.64  E-value=0.00062  Score=41.29  Aligned_cols=136  Identities=14%  Similarity=0.223  Sum_probs=75.4

Q ss_pred             HCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCCCHHHEECC
Q ss_conf             010245678889899999853134567079996366544531000012102445888642158764-3455511210002
Q gi|254780397|r  182 ILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLRNDNKNI-IGPLPADSMFHHS  260 (343)
Q Consensus       182 ~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~g~~v-~GP~paDt~F~~~  260 (343)
                      .+|++.+.+..+...+..++    .++++-+.    |-.  ..+-.  .....-+.++.-++--+| .-..-.|++-..-
T Consensus       161 ~~t~~~~~ri~~~Af~~a~~----r~k~vt~v----~K~--ni~~~--~~lf~~~~~eva~~yp~i~~~~~~vD~~~~~l  228 (357)
T d1a05a_         161 VYDEDEIRRIAHVAFRAAQG----RRKQLCSV----DKA--NVLET--TRLWREVVTEVARDYPDVRLSHMYVDNAAMQL  228 (357)
T ss_dssp             EEEHHHHHHHHHHHHHHHHT----TTSEEEEE----ECT--TTCHH--HHHHHHHHHHHGGGCTTSEEEEEEHHHHHHHH
T ss_pred             EEEHHHHHHHHHHHHHHHHC----CCCEEEEE----ECC--CCCCH--HHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHH
T ss_conf             96289999999999988645----78648888----536--64113--68999999999865898278751799999998


Q ss_pred             C--CCCCCEEEE--EECC----HHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             2--366768999--8512----022555541447727999208764755887552221336866838999999999999
Q gi|254780397|r  261 A--RQCYDVAIC--MYHD----QALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQL  331 (343)
Q Consensus       261 ~--~~~~D~vla--mYHD----Qglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~  331 (343)
                      .  -.+||++|+  ||=|    .+-.-+=.++.--+.|+.-+.  ----|-||||-||||||+|||.+|+-|.-+-++-
T Consensus       229 v~~P~~fdViv~~Nl~GDIlSDl~a~l~GglGl~ps~nig~~~--a~fE~~HGsapdiaGk~~aNP~a~ils~ammL~~  305 (357)
T d1a05a_         229 IRAPAQFDVLLTGNMFGDILSDEASQLTGSIGMLPSASLGEGR--AMYEPIHGSAPDIAGQDKANPLATILSVAMMLRH  305 (357)
T ss_dssp             HHCGGGCSEEEECHHHHHHHHHHHHHTTSCGGGCEEEEECSSC--EEEEESSCCCGGGTTTTCSCCHHHHHHHHHHHHH
T ss_pred             HHCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC--CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             7454565678511788887889998873576541030006873--0102456878000589865949999999999972


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Isocitrate/Isopropylmalate dehydrogenase-like
superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
family: Dimeric isocitrate & isopropylmalate dehydrogenases
domain: 3-isopropylmalate dehydrogenase, IPMDH
species: Thiobacillus ferrooxidans [TaxId: 920]