HHSEARCH alignment of GI: 254780397 and SCOP domain: d1cnza_

Alignment
>d1cnza_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Salmonella typhimurium [TaxId: 90371]}
Probab=97.40  E-value=0.00012  Score=45.56  Aligned_cols=137  Identities=12%  Similarity=0.256  Sum_probs=80.2

Q ss_pred             HCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCCCHHHEECC
Q ss_conf             010245678889899999853134567079996366544531000012102445888642158764-3455511210002
Q gi|254780397|r  182 ILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLRNDNKNI-IGPLPADSMFHHS  260 (343)
Q Consensus       182 ~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~g~~v-~GP~paDt~F~~~  260 (343)
                      .+|+..+.+-++...+.-++.   .+ |  |.......    .+- . .....-+.++..++--+| ....-.|.+..+-
T Consensus       166 ~~t~~~~~ri~r~Af~~A~~r---~~-k--Vt~v~KaN----v~k-~-~~lf~~~~~eva~~yp~I~~~~~~vD~~~~~l  233 (363)
T d1cnza_         166 VYHRFEIERIARIAFESARKR---RR-K--VTSIDKAN----VLQ-S-SILWREIVNDVAKTYPDVELAHMYIDNATMQL  233 (363)
T ss_dssp             EEEHHHHHHHHHHHHHHHHTT---TS-E--EEEEECTT----TCH-H-HHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHH
T ss_pred             EEEHHHHHHHHHHHHHHHHHC---CC-C--EEEECCCC----CEE-E-HHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHH
T ss_conf             764899999999999999966---99-5--68981375----330-4-48789999998622887497517665899998


Q ss_pred             --CCCCCCEEEE--EE----CCHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             --2366768999--85----12022555541447727999208764755887552221336866838999999999999
Q gi|254780397|r  261 --ARQCYDVAIC--MY----HDQALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQL  331 (343)
Q Consensus       261 --~~~~~D~vla--mY----HDQglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~  331 (343)
                        .-..||++|+  ||    .|.+.--+-.+++--+.|+... .+---.|-||||.||||||+|||.+|+-|.-+-++.
T Consensus       234 v~~P~~fdViv~~Nl~GDIlSDl~a~l~GglG~~~s~ni~~~-~~a~fEp~HGsapdiaGk~~aNP~a~Ils~ammL~~  311 (363)
T d1cnza_         234 IKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQ-GFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRY  311 (363)
T ss_dssp             HHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTT-SCEEEEESSCCCGGGTTTTCSCCHHHHHHHHHHHHH
T ss_pred             HHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHEEEECC-CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             645577766642357777678899887504542111034036-407851677765334798864909999999999984


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Isocitrate/Isopropylmalate dehydrogenase-like
superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
family: Dimeric isocitrate & isopropylmalate dehydrogenases
domain: 3-isopropylmalate dehydrogenase, IPMDH
species: Salmonella typhimurium [TaxId: 90371]