HHSEARCH alignment of GI: 254780397 and SCOP domain: d1u7na_

Alignment
>d1u7na_ c.77.1.4 (A:) Fatty acid/phospholipid synthesis protein PlsX {Enterococcus faecalis [TaxId: 1351]}
Probab=98.10  E-value=2.8e-05  Score=49.41  Aligned_cols=262  Identities=16%  Similarity=0.166  Sum_probs=150.9

Q ss_pred             CEEE-ECCCCCCCCHHHHHHHHCCC-CHHCCCCEEEECCHHHHHHHHHHCCCCCCEEECCCCHHCCCCCCCEEEECCCCC
Q ss_conf             3899-71898774789999984285-232489899993999999999981899744753861011126785376103332
Q gi|254780397|r    6 PLIL-TQGDPAGIGPDISLKAWASR-QITAIPPFIYIGDVDVLNARAKQLNLSVPLYETDCKNAVSIFKKALPIISSPCG   83 (343)
Q Consensus         6 pI~I-T~GDPaGIGpEIilKal~~~-~~~~~~~~viigd~~~l~~~~k~l~~~~~i~~i~~~~~~~~~~~~i~i~~~~~~   83 (343)
                      +|+| .||  .-=||+.+++..... +......++++||.+.++..   +..                ...+.+++.+..
T Consensus         2 rIAvDaMG--GD~gP~~~v~Ga~~al~~~~d~~i~LvG~e~~i~~~---l~~----------------~~~l~Ivha~~~   60 (329)
T d1u7na_           2 KIAVDAMG--GDNAPQAIVEGVMLAKQDFPDIEFQLYGKEAEIKKY---ITD----------------EKNITIIHTDEK   60 (329)
T ss_dssp             EEEEESSC--STTTTHHHHHHHHHHHHHCTTCEEEEEECHHHHHTT---CSC----------------CTTEEEEECSCC
T ss_pred             EEEEECCC--CCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHH---HCC----------------CCCEEEEECCCC
T ss_conf             89998158--765808899999999987889779999399999987---532----------------578089968986


Q ss_pred             CCCCCCCCCCCCCHHHH-----HHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             20013553100000246-----7788776643012343044322344777641013256478999983423588665211
Q gi|254780397|r   84 AKIVTGTPNPQTASSTI-----ANIEKAVSLTLSGQALAIVTNPIAKFLLYQEKFKFPGHTEFLAELAKKNTGITFKPVM  158 (343)
Q Consensus        84 ~~~~~G~~s~~~g~~~~-----~sl~~A~~l~~~g~~~alVT~PInK~~l~~aG~~f~GhTE~La~~~~~~~~~~~~~~M  158 (343)
                        +...    +....++     .|+..|++++++|++||+|++=-.-..+-.+-+.       |    +.-.+.. .|..
T Consensus        61 --I~md----d~P~~alR~kk~SSm~~a~~lvk~g~ada~VSaGnTGAl~a~a~~~-------l----~~i~gv~-RPai  122 (329)
T d1u7na_          61 --IASD----DEPVKAIRRKKTASMVLAAQAVKNGEADAIFSAGNTGALLAAGLFI-------V----GRIKNVE-RPGL  122 (329)
T ss_dssp             --CCTT----CCHHHHHHHCTTSHHHHHHHHHHHTSCSEEEESSCHHHHHHHHHHT-------T----CBCTTCS-SCEE
T ss_pred             --CCCC----CCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEH-------H----CCCCCCC-CEEE
T ss_conf             --3689----8777898742342488999998743355675437875257652001-------1----3425643-1024


Q ss_pred             CCCCCCCEEEEEC-----CCCCHHHHHHHC--CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCH
Q ss_conf             2332211266530-----453133343201--024567888989999985313456707999636654453100001210
Q gi|254780397|r  159 MLSGPQLRTVPVT-----IHIPIADICRIL--STKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKN  231 (343)
Q Consensus       159 ll~~~~L~V~l~T-----tHiPLk~V~~~i--t~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~  231 (343)
                             -+.+=|     .|.=|-||=.++  +.+.+.+...+=.-..+..+|+++||++++-.    |+.-.-|+|.  
T Consensus       123 -------a~~~Pt~~~~~~~~~llD~GAN~~~~~~~L~qFA~mG~~ya~~v~~~~~P~VgLLNi----G~E~~KG~~~--  189 (329)
T d1u7na_         123 -------MSTLPVMGEPDKGFDMLDLGANADNKPEHLVQYAVLGSFYAEKVRNVQNPRVGLLNN----GTEETKGSEL--  189 (329)
T ss_dssp             -------EEEEECTTCTTCEEEEECSSSCSCCCHHHHHHHHHHHHHHHHHTTCCSSCCEEEECS----CC----CCHH--
T ss_pred             -------EEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC----HHHHCCCCHH--
T ss_conf             -------575566678888559996787877798999999999888999838985434766324----2321024699--


Q ss_pred             HHHHHHHHHHH-CCCCCCCCCCCHHHEECCCCCCCCEEEEEECCHHHHHHHHHC--------------CCCE--------
Q ss_conf             24458886421-587643455511210002236676899985120225555414--------------4772--------
Q gi|254780397|r  232 IIIPAITYLRN-DNKNIIGPLPADSMFHHSARQCYDVAICMYHDQALIPIKTLD--------------FNQT--------  288 (343)
Q Consensus       232 iI~PaI~~~~~-~g~~v~GP~paDt~F~~~~~~~~D~vlamYHDQglip~K~l~--------------f~~~--------  288 (343)
                       +.-|-+.+++ ..++..|-+-++-+|.    ++.|+|||== =-|-+.+|+..              |.++        
T Consensus       190 -~k~a~~lL~~~~~~nf~GnvEg~di~~----g~~DVvV~DG-FtGNi~LKt~EG~~~~i~~~lk~~~~~~~~~~~~g~l  263 (329)
T d1u7na_         190 -TKKAFELLAADETINFVGNVEARELLN----GVADVVVTDG-FTGNAVLKSIEGTAMNMMSLLKTAILSEGVKGKMGAL  263 (329)
T ss_dssp             -HHHHHHHHHHCTTSCEEEEECGGGGGG----CSCSEEECCH-HHHHHHHHHHHHHHHHHHHHHHHHHTC-------CHH
T ss_pred             -HHHHHHHHHHCCCCCEEEEECCCCCCC----CCCCEEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf             -999999863135865046623763558----8665899744-1124999987679999999999987202256677899


Q ss_pred             -------------------EEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             -------------------79992087647558875522213368668389999999999999852
Q gi|254780397|r  289 -------------------VNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQLGYQK  335 (343)
Q Consensus       289 -------------------Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~~~~~  335 (343)
                                         =.+-|||.=+.          |.+-|.+++.++.+||++|.++++++
T Consensus       264 l~~~~l~~~~~~~d~~~~gGa~lLGl~g~v----------ik~HG~S~~~a~~nAI~~a~~~~~~~  319 (329)
T d1u7na_         264 LLKNALHGMKDEMDYSKHGGAVLFGLKAPV----------IKTHGATGPDAVRYTIRQIHTMLETQ  319 (329)
T ss_dssp             HHHHHHHHHHHHTCGGGGCCEEEETBSSCE----------EECCTTCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHCCCCCCCCEEEECCCCCE----------EECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf             999999999876890007988897488318----------98378999899999999999999858


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Isocitrate/Isopropylmalate dehydrogenase-like
superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
family: PlsX-like
domain: Fatty acid/phospholipid synthesis protein PlsX
species: Enterococcus faecalis [TaxId: 1351]