HHSEARCH alignment of GI: 254780397 and SCOP domain: d1w0da_

Alignment
>d1w0da_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.97  E-value=0.00025  Score=43.68  Aligned_cols=139  Identities=12%  Similarity=0.163  Sum_probs=73.4

Q ss_pred             HHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC--CCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCCCHHH
Q ss_conf             320102456788898999998531345670799963665445--31000012102445888642158764-345551121
Q gi|254780397|r  180 CRILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGE--NATIGIEEKNIIIPAITYLRNDNKNI-IGPLPADSM  256 (343)
Q Consensus       180 ~~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE--~G~~G~EE~~iI~PaI~~~~~~g~~v-~GP~paDt~  256 (343)
                      .+.+|+..+.+-++...+.-++.    +.++-++ =..+.=.  .|+|        .-+.++..++--++ .-..-.|.+
T Consensus       148 ~~~~t~~~~~Ri~~~Af~~A~~~----r~~Vt~v-~KaNv~~~t~g~f--------~~~~~~va~~yp~i~~~~~~vD~~  214 (337)
T d1w0da_         148 VSVNTAFGVRRVVADAFERARRR----RKHLTLV-HKTNVLTFAGGLW--------LRTVDEVGECYPDVEVAYQHVDAA  214 (337)
T ss_dssp             EEEEEHHHHHHHHHHHHHHHHHT----TSEEEEE-ECTTTSHHHHHHH--------HHHHHHHHTTCTTSEEEEEEHHHH
T ss_pred             EEEECCHHEEEHHHHHHHHHHCC----CCEEEEE-ECCCHHHHHHHHH--------HHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf             98611200243033455676536----8548999-8751000247999--------988888740388503445647889


Q ss_pred             EECCCC--CCCCEEEE--EECC----HHHHHHHHHCCCCEEEEEEEC-CEEEECCCCCCCHHHCCCCCCCHHHHHHHHHH
Q ss_conf             000223--66768999--8512----022555541447727999208-76475588755222133686683899999999
Q gi|254780397|r  257 FHHSAR--QCYDVAIC--MYHD----QALIPIKTLDFNQTVNITLGL-PFVRTSPDHGTAFDIAGSSLTQEESLVSALKI  327 (343)
Q Consensus       257 F~~~~~--~~~D~vla--mYHD----Qglip~K~l~f~~~Vn~t~GL-p~irtSpdHGTafdiagk~~a~~~s~~~ai~~  327 (343)
                      ..+-.+  .+||++|+  ||=|    .+---.=.+++--+.|+--.- .+----|-||||.||||||+|||.+|+-|.-+
T Consensus       215 ~~~lv~~P~~fdViv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~~a~fEp~HGsApdiaGk~iANP~a~IlS~am  294 (337)
T d1w0da_         215 TIHMITDPGRFDVIVTDNLFGDIITDLAAAVCGGIGLAASGNIDATRANPSMFEPVHGSAPDIAGQGIADPTAAIMSVAL  294 (337)
T ss_dssp             HHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCGGGCEEEEECTTCSSCEEEEESSCCCGGGTTSSCSCCHHHHHHHHH
T ss_pred             HHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHCCCCCCCCHHHHHHHHH
T ss_conf             99998523455603331788888888888744786657763322111341001356675065569996592999999999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780397|r  328 AAQL  331 (343)
Q Consensus       328 a~~~  331 (343)
                      -++-
T Consensus       295 ML~~  298 (337)
T d1w0da_         295 LLSH  298 (337)
T ss_dssp             HHHH
T ss_pred             HHHH
T ss_conf             9998


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Isocitrate/Isopropylmalate dehydrogenase-like
superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
family: Dimeric isocitrate & isopropylmalate dehydrogenases
domain: 3-isopropylmalate dehydrogenase, IPMDH
species: Mycobacterium tuberculosis [TaxId: 1773]