Query gi|254780397|ref|YP_003064810.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 343
No_of_seqs 216 out of 2390
Neff 6.9
Searched_HMMs 13730
Date Wed Jun 1 03:40:21 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780397.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ptma_ c.77.1.3 (A:) 4-hydrox 100.0 0 0 879.8 28.4 328 1-336 1-329 (329)
2 d1xcoa_ c.77.1.5 (A:) Phosphot 99.1 2.2E-09 1.6E-13 74.0 13.4 284 3-329 16-320 (324)
3 d2af4c1 c.77.1.5 (C:2-333) Pho 99.0 7.2E-09 5.3E-13 70.9 13.9 290 4-336 15-331 (332)
4 d1r5ja_ c.77.1.5 (A:) Phosphot 98.9 7.3E-09 5.3E-13 70.9 11.6 277 3-311 17-316 (329)
5 d1vmia_ c.77.1.5 (A:) Ethanola 98.9 2.4E-08 1.8E-12 67.7 13.3 285 3-328 19-325 (329)
6 d1vi1a_ c.77.1.4 (A:) Fatty ac 98.5 3.4E-06 2.5E-10 54.8 13.8 268 5-335 2-318 (334)
7 d1u7na_ c.77.1.4 (A:) Fatty ac 98.1 2.8E-05 2E-09 49.4 11.2 262 6-335 2-319 (329)
8 d1pb1a_ c.77.1.1 (A:) Isocitra 97.6 4.8E-05 3.5E-09 47.9 5.5 68 262-331 293-366 (416)
9 d1vlca_ c.77.1.1 (A:) 3-isopro 97.5 7.2E-05 5.2E-09 46.9 4.9 136 181-331 165-309 (362)
10 d1wpwa_ c.77.1.1 (A:) 3-isopro 97.4 0.00017 1.3E-08 44.6 6.6 139 181-333 139-285 (336)
11 d1cnza_ c.77.1.1 (A:) 3-isopro 97.4 0.00012 8.8E-09 45.6 5.3 137 182-331 166-311 (363)
12 d1hqsa_ c.77.1.1 (A:) Isocitra 97.4 9.8E-05 7.1E-09 46.1 4.5 81 251-331 284-372 (423)
13 d1t0la_ c.77.1.1 (A:) NADP-dep 97.0 9.3E-05 6.7E-09 46.2 1.6 82 252-333 250-344 (414)
14 d1w0da_ c.77.1.1 (A:) 3-isopro 97.0 0.00025 1.8E-08 43.7 3.3 139 180-331 148-298 (337)
15 d1g2ua_ c.77.1.1 (A:) 3-isopro 96.9 0.00079 5.7E-08 40.7 5.1 137 180-331 154-300 (345)
16 d1v53a1 c.77.1.1 (A:1-356) 3-i 96.7 0.00048 3.5E-08 41.9 3.3 136 182-331 161-306 (356)
17 d1a05a_ c.77.1.1 (A:) 3-isopro 96.6 0.00062 4.5E-08 41.3 3.3 136 182-331 161-305 (357)
18 d1lwda_ c.77.1.1 (A:) NADP-dep 93.6 0.046 3.4E-06 30.0 4.5 73 262-334 261-345 (413)
19 d1a05a_ c.77.1.1 (A:) 3-isopro 83.8 0.24 1.7E-05 25.8 1.9 20 4-25 1-20 (357)
20 d1w0da_ c.77.1.1 (A:) 3-isopro 83.5 0.25 1.8E-05 25.6 1.9 20 4-25 1-20 (337)
21 d1cnza_ c.77.1.1 (A:) 3-isopro 82.1 0.31 2.2E-05 25.1 1.9 23 1-25 1-23 (363)
22 d2bona1 e.52.1.2 (A:5-299) Lip 79.5 0.65 4.7E-05 23.2 2.9 16 103-118 105-120 (295)
23 d2d13a1 c.26.2.1 (A:2-227) Hyp 77.3 2.1 0.00016 20.0 6.7 74 103-189 78-166 (226)
24 d1yioa2 c.23.1.1 (A:3-130) Res 77.0 1.5 0.00011 20.9 4.2 99 234-335 16-124 (128)
25 d2qv7a1 e.52.1.2 (A:1-312) Dia 65.5 2.9 0.00021 19.3 3.5 13 103-115 108-120 (312)
26 d2bfwa1 c.87.1.8 (A:218-413) G 61.7 4.7 0.00034 18.0 5.7 104 206-331 65-176 (196)
27 d1i2ha_ b.55.1.4 (A:) Homer {R 53.2 6.3 0.00046 17.2 3.5 69 267-335 34-115 (145)
28 d1nvmb1 c.2.1.3 (B:1-131,B:287 46.9 4.4 0.00032 18.2 1.9 51 1-56 1-54 (157)
29 d1dpta_ d.80.1.3 (A:) D-dopach 42.0 9.9 0.00072 16.0 4.6 78 137-218 21-105 (117)
30 d1jf8a_ c.44.1.1 (A:) Arsenate 41.1 10 0.00074 16.0 4.0 55 207-275 30-84 (130)
31 d1g7sa4 c.37.1.8 (A:1-227) Ini 37.2 7.1 0.00052 16.9 1.7 24 295-328 192-215 (227)
32 d1uiza_ d.80.1.3 (A:) Micropha 30.4 15 0.0011 14.9 5.6 73 137-214 22-99 (115)
33 d2ha9a1 c.7.1.5 (A:1-440) Unch 29.7 16 0.0011 14.9 2.8 45 174-219 229-275 (440)
34 d1c41a_ c.16.1.1 (A:) Lumazine 24.9 10 0.00076 15.9 0.8 152 162-340 9-192 (195)
35 d1hfoa_ d.80.1.3 (A:) Micropha 24.4 19 0.0014 14.3 5.6 73 138-215 22-99 (113)
36 d2akab1 c.37.1.8 (B:6-304) Dyn 23.0 21 0.0015 14.1 3.5 12 33-44 25-36 (299)
37 d1rzua_ c.87.1.8 (A:) Glycogen 21.1 23 0.0017 13.9 2.6 81 245-335 348-444 (477)
No 1
>d1ptma_ c.77.1.3 (A:) 4-hydroxythreonine-4-phosphate dehydrogenase PdxA {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=0 Score=879.81 Aligned_cols=328 Identities=33% Similarity=0.547 Sum_probs=313.6
Q ss_pred CCCCCCEEEECCCCCCCCHHHHHHHHCCCCHHCCCCEEEECCHHHHHHHHHHCCCCCCEEECCCCHHCC-CCCCCEEEEC
Q ss_conf 988883899718987747899999842852324898999939999999999818997447538610111-2678537610
Q gi|254780397|r 1 MDEFLPLILTQGDPAGIGPDISLKAWASRQITAIPPFIYIGDVDVLNARAKQLNLSVPLYETDCKNAVS-IFKKALPIIS 79 (343)
Q Consensus 1 M~k~~pI~IT~GDPaGIGpEIilKal~~~~~~~~~~~viigd~~~l~~~~k~l~~~~~i~~i~~~~~~~-~~~~~i~i~~ 79 (343)
|.|.+||+||+|||+||||||++|+|++. ..+++++|||+++++++++.++++++++.++..++.. ...+.+++++
T Consensus 1 M~k~krIaIT~GDPaGIGPEIilK~~~~~---~~~~~ivigd~~~l~~~~~~l~~~~~i~~i~~~~~~~~~~~~~l~i~~ 77 (329)
T d1ptma_ 1 MVKTQRVVITPGEPAGIGPDLVVQLAQRE---WPVELVVCADATLLTNRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLP 77 (329)
T ss_dssp CCCCCEEEEECCSTTSSHHHHHHHHTTSC---CSSEEEEEECHHHHHHHHHHTTCCCEEEECCTTSCCCCCCTTEEEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHHC---CCCCEEEEECHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCCCC
T ss_conf 99998699982786074899999998516---899879998999999999984999627886872232001254312354
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 33322001355310000024677887766430123430443223447776410132564789999834235886652112
Q gi|254780397|r 80 SPCGAKIVTGTPNPQTASSTIANIEKAVSLTLSGQALAIVTNPIAKFLLYQEKFKFPGHTEFLAELAKKNTGITFKPVMM 159 (343)
Q Consensus 80 ~~~~~~~~~G~~s~~~g~~~~~sl~~A~~l~~~g~~~alVT~PInK~~l~~aG~~f~GhTE~La~~~~~~~~~~~~~~Ml 159 (343)
.+...++++|++++++|+++++||+.|+++|++|+++||||+||||++|+.+|++|+||||||+++++.+ +++||
T Consensus 78 ~~~~~~~~~G~~~~~~g~~a~~~l~~A~~~~~~g~~~alVT~PInK~~i~~ag~~f~GHTE~La~~~~~~-----~~~Mm 152 (329)
T d1ptma_ 78 VALRAPVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAK-----KVVMM 152 (329)
T ss_dssp CCCSSCCBTTBCCTTHHHHHHHHHHHHHHHHHHTSCSEEEECCCCHHHHHHTTCCCCCHHHHHHHHTTCS-----CCEEE
T ss_pred CHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCCCEEEEEHHCCCCCC-----CHHHH
T ss_conf 0000122334432100037899999999998638765143174044555313776431541000022355-----26888
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 33221126653045313334320102456788898999998531345670799963665445310000121024458886
Q gi|254780397|r 160 LSGPQLRTVPVTIHIPIADICRILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITY 239 (343)
Q Consensus 160 l~~~~L~V~l~TtHiPLk~V~~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~ 239 (343)
|++++|||+|+|||||||+|++.||+++|.+++++++++|+++||+++||||||||||||||+|+||+||+++|.|||++
T Consensus 153 l~~~~L~V~~vTtHipLk~V~~~it~~~i~~~i~~~~~~l~~~~gi~~PrIaV~gLNPHaGE~G~~G~EE~~ii~Pai~~ 232 (329)
T d1ptma_ 153 LATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLNE 232 (329)
T ss_dssp EESSSCEEEESSCSSCGGGHHHHCCHHHHHHHHHHHHHHHHHTTCCSSCEEEEECSSGGGGGGGTTCSHHHHTHHHHHHH
T ss_pred HHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 77644200110112025555542106889999999999999851985400257511654220011014556778889999
Q ss_pred HHHCCCCCCCCCCCHHHEECCCCCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHH
Q ss_conf 42158764345551121000223667689998512022555541447727999208764755887552221336866838
Q gi|254780397|r 240 LRNDNKNIIGPLPADSMFHHSARQCYDVAICMYHDQALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEE 319 (343)
Q Consensus 240 ~~~~g~~v~GP~paDt~F~~~~~~~~D~vlamYHDQglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~ 319 (343)
+|++|++++|||||||+|.++++++||+||||||||||||||+++|++|||+|+||||+||||||||||||||||+||+.
T Consensus 233 ~~~~gi~v~GP~paDt~F~~~~~~~~D~vvamYHDQglip~K~~~f~~~vn~tlGLp~irtSpdHGTA~dIagk~~A~~~ 312 (329)
T d1ptma_ 233 LRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVG 312 (329)
T ss_dssp HHHTTCEEEEEECHHHHSSHHHHTTCSEEEESSHHHHHHHHHTTCSSSCEEEEESSSSEEEECSSCCCGGGTTSSCCCCH
T ss_pred HHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCEEEEECCCCCEEECCCCCCHHHHCCCCCCCHH
T ss_conf 98669554799886024545422774189886243100555541456407984389912768998722434378989969
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 99999999999998520
Q gi|254780397|r 320 SLVSALKIAAQLGYQKN 336 (343)
Q Consensus 320 s~~~ai~~a~~~~~~~~ 336 (343)
||++|+++|.+|++||+
T Consensus 313 s~~~ai~~a~~~~~~~~ 329 (329)
T d1ptma_ 313 SFITALNLAIKMIVNTQ 329 (329)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHCCC
T ss_conf 99999999999986179
No 2
>d1xcoa_ c.77.1.5 (A:) Phosphotransacetylase Pta {Bacillus subtilis [TaxId: 1423]}
Probab=99.08 E-value=2.2e-09 Score=73.98 Aligned_cols=284 Identities=18% Similarity=0.194 Sum_probs=166.6
Q ss_pred CCCCEEEECCCCCCCCHHHHHHHHCCCCHHCCCCEEEECCHHHHHHHHHHCCCCCC-EEECCCCHHCCCCCCCEEEECCC
Q ss_conf 88838997189877478999998428523248989999399999999998189974-47538610111267853761033
Q gi|254780397|r 3 EFLPLILTQGDPAGIGPDISLKAWASRQITAIPPFIYIGDVDVLNARAKQLNLSVP-LYETDCKNAVSIFKKALPIISSP 81 (343)
Q Consensus 3 k~~pI~IT~GDPaGIGpEIilKal~~~~~~~~~~~viigd~~~l~~~~k~l~~~~~-i~~i~~~~~~~~~~~~i~i~~~~ 81 (343)
+.++|++.- |=-+++ ++|...-.-...+.||++|+.+.++..++.++++++ ++.+++.+.... ......+
T Consensus 16 ~~krIV~~E----geD~rv-L~Aa~~~~~~gi~~pILiG~~~~I~~~a~~~gl~l~~ieIidp~~~~~~-~~~~~~~--- 86 (324)
T d1xcoa_ 16 KDVKIVFPE----GLDERI-LEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGM-EDLVQAF--- 86 (324)
T ss_dssp SCCEEEESC----TTCHHH-HHHHHHHHHTTSSEEEEESCHHHHHHHHHTTTBCCTTCEEECTTTCTTH-HHHHHHH---
T ss_pred CCCEEEEEC----CCCHHH-HHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCCHHH-HHHHHHH---
T ss_conf 999899708----799899-9999999986986899987999999999986998555577788851667-9999998---
Q ss_pred CCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC-CCCCCCCC
Q ss_conf 3220013553100-000246778877664301234304432234477764101325647899998342358-86652112
Q gi|254780397|r 82 CGAKIVTGTPNPQ-TASSTIANIEKAVSLTLSGQALAIVTNPIAKFLLYQEKFKFPGHTEFLAELAKKNTG-ITFKPVMM 159 (343)
Q Consensus 82 ~~~~~~~G~~s~~-~g~~~~~sl~~A~~l~~~g~~~alVT~PInK~~l~~aG~~f~GhTE~La~~~~~~~~-~~~~~~Ml 159 (343)
. +..-|+.+.+ .-+...+....|..++..|++||+|+|-++...-.. ...-+..+...+ ..-..+|+
T Consensus 87 ~--~~rk~~~~~~~a~~~~~~~~~~a~~mv~~G~aD~lv~G~~~~~~~~l---------~~~l~~ig~~~g~~~~s~~~~ 155 (324)
T d1xcoa_ 87 V--ERRKGKATEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTV---------RPALQIIKTKEGVKKTSGVFI 155 (324)
T ss_dssp H--HHTTTSSCHHHHHHHTTSHHHHHHHHHHTTSCSEEEECTTSCHHHHH---------HHHHHTSCBCTTCCCCEEEEE
T ss_pred H--HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCHHHC---------EEEEEECCCCCCCCCCCCEEE
T ss_conf 8--77516771999998721047898999861530113551220342231---------046764058898533443333
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 33221126653045313334320102456788898999998531345670799963665445310000121024458886
Q gi|254780397|r 160 LSGPQLRTVPVTIHIPIADICRILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITY 239 (343)
Q Consensus 160 l~~~~L~V~l~TtHiPLk~V~~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~ 239 (343)
|...+-.+.+.-+++-. .=|.+.+.+-+....+..+ .||+. ||+|+++. .|.|.--.++.+...-|.+.
T Consensus 156 ~~~~~~~l~~tD~~vn~-----~P~~e~la~Ia~~aa~~ar-~lg~e-PkVA~LS~----s~~gs~~~~~~~~~~~a~~~ 224 (324)
T d1xcoa_ 156 MARGEEQYVFADCAINI-----APDSQDLAEIAIESANTAK-MFDIE-PRVAMLSF----STKGSAKSDETEKVADAVKI 224 (324)
T ss_dssp EEETTEEEEEECSSSCS-----SCCHHHHHHHHHHHHHHHH-HTTCC-CCEEEECS----SSTTSSCSHHHHHHHHHHHH
T ss_pred ECCCCCCEEEECCEEEE-----CCCHHHHHHHHHHHHHHHH-HHCCC-CCEEEEEC----CCCCCCCCCCHHHHHHHHHH
T ss_conf 30588727997873077-----8899999999999999998-73435-54000211----56779887301578999999
Q ss_pred HHH--CCCCCCCCCCCHHHEECCCC----------CCCCEEEEEECCHHHHHHHHHC-CCCEE--E-EEEEC--CEEEEC
Q ss_conf 421--58764345551121000223----------6676899985120225555414-47727--9-99208--764755
Q gi|254780397|r 240 LRN--DNKNIIGPLPADSMFHHSAR----------QCYDVAICMYHDQALIPIKTLD-FNQTV--N-ITLGL--PFVRTS 301 (343)
Q Consensus 240 ~~~--~g~~v~GP~paDt~F~~~~~----------~~~D~vlamYHDQglip~K~l~-f~~~V--n-~t~GL--p~irtS 301 (343)
++. .++.++||+..|.++.+... ++-|+.|.=-=|-|-|..|++- |..+. - +-.|+ |+.-+|
T Consensus 225 ~~~~~~~~~vdG~lq~D~Al~~~~a~~k~~~s~v~G~AnvlI~P~l~agNi~yK~l~~~~~a~~~Gpil~G~~~Pv~~~s 304 (324)
T d1xcoa_ 225 AKEKAPELTLDGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLS 304 (324)
T ss_dssp HHHHCTTSCEEEEECHHHHHCHHHHHHHCCSSSCSSCCSEEECSSHHHHHHHHHHHHHTTTCEEEEEEEESBSSCEEECC
T ss_pred HHCCCCCCEECCCCCHHHCCCHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCEEECCHHHCCCCCEEECC
T ss_conf 86408873132663054202876663117776567879989948807869999999984498387606446799879789
Q ss_pred CCCCCCHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 8875522213368668389999999999
Q gi|254780397|r 302 PDHGTAFDIAGSSLTQEESLVSALKIAA 329 (343)
Q Consensus 302 pdHGTafdiagk~~a~~~s~~~ai~~a~ 329 (343)
.. ++.+..++.+-+|+
T Consensus 305 r~------------~s~~~i~n~~aia~ 320 (324)
T d1xcoa_ 305 RG------------CNAEDVYNLALITA 320 (324)
T ss_dssp TT------------CCHHHHHHHHHHHH
T ss_pred CC------------CCHHHHHHHHHHHH
T ss_conf 99------------99899999999999
No 3
>d2af4c1 c.77.1.5 (C:2-333) Phosphotransacetylase Pta {Methanosarcina thermophila [TaxId: 2210]}
Probab=99.02 E-value=7.2e-09 Score=70.92 Aligned_cols=290 Identities=15% Similarity=0.118 Sum_probs=171.2
Q ss_pred CCCEEEECCCCCCCCHHHHHHHHCCCCHHCCCCEEEECCHHHHHHHHHHCCCCCCEEECCCCHHCCCCCCCEEEECCCCC
Q ss_conf 88389971898774789999984285232489899993999999999981899744753861011126785376103332
Q gi|254780397|r 4 FLPLILTQGDPAGIGPDISLKAWASRQITAIPPFIYIGDVDVLNARAKQLNLSVPLYETDCKNAVSIFKKALPIISSPCG 83 (343)
Q Consensus 4 ~~pI~IT~GDPaGIGpEIilKal~~~~~~~~~~~viigd~~~l~~~~k~l~~~~~i~~i~~~~~~~~~~~~i~i~~~~~~ 83 (343)
.++|++.-|+ -+. +++|.....-...+.||++|++..++..++.++++ .+..+++.+.... ......+ ..
T Consensus 15 ~krIvf~Eg~----D~r-vL~Aa~~~~~~gi~~pILiG~~~~I~~~~~~l~l~-~~~iIdp~~~~~~-~~y~~~~---~~ 84 (332)
T d2af4c1 15 NKTIALPETE----DIR-TLQAAAKILERGIADIVLVGNEADIKALAGDLDLS-KAKIVDPKTYEKK-DEYINAF---YE 84 (332)
T ss_dssp CCEEEECCTT----SHH-HHHHHHHHHHHTSCEEEEESCHHHHHHHHSSCCCT-TSEEECTTSCTTH-HHHHHHH---HH
T ss_pred CCEEEECCCC----CHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCC-CCEEECCCCCCHH-HHHHHHH---HH
T ss_conf 9989986879----989-99999999986990699987999999999858998-6768787421026-7899999---99
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHH-HHHHCCCCCCHHHHHHHHHCCCCC-CCCCCCCCCC
Q ss_conf 20013553100000246778877664301234304432234477-764101325647899998342358-8665211233
Q gi|254780397|r 84 AKIVTGTPNPQTASSTIANIEKAVSLTLSGQALAIVTNPIAKFL-LYQEKFKFPGHTEFLAELAKKNTG-ITFKPVMMLS 161 (343)
Q Consensus 84 ~~~~~G~~s~~~g~~~~~sl~~A~~l~~~g~~~alVT~PInK~~-l~~aG~~f~GhTE~La~~~~~~~~-~~~~~~Mll~ 161 (343)
..-.-|..-..+.+...+.+..|+.++..|++|++|+|-++... ...... +.-+...+ .....+++|.
T Consensus 85 ~r~~KG~~~~~A~~~~~~~~~~a~~mV~~G~aD~lv~G~~~~t~~~lr~~l----------~~ig~~~~~~~~s~~~i~~ 154 (332)
T d2af4c1 85 LRKHKGITLENAAEIMSDYVYFAVMMAKLGEVDGVVSGAAHSSSDTLRPAV----------QIVKTAKGAALASAFFIIS 154 (332)
T ss_dssp HHGGGTCCHHHHHHHTTSHHHHHHHHHHTTSCSEEEECTTSCSHHHHHHHH----------HHTCBSTTCSCCEEEEEEE
T ss_pred HHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHEEECCCCCCHHHHHHHH----------HEEECCCCCCCCCEEEEEE
T ss_conf 874459999999987400259999999769720034134457388766555----------2010322233465269997
Q ss_pred C-------CCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHH
Q ss_conf 2-------211266530453133343201024567888989999985313456707999636654453100001210244
Q gi|254780397|r 162 G-------PQLRTVPVTIHIPIADICRILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIII 234 (343)
Q Consensus 162 ~-------~~L~V~l~TtHiPLk~V~~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~ 234 (343)
- +++ +.+.-+++-. .=|.+.+.+-+....+..++ ||+..||+|++. +.|.|.--.|..+...
T Consensus 155 ~p~~~~~~~~~-l~~tD~avn~-----~P~~eqla~Ia~~aa~~~~~-~g~~~PkVAlLS----~s~~gs~~~~~~~~~~ 223 (332)
T d2af4c1 155 VPDCEYGSDGT-FLFADSGMVE-----MPSVEDVANIAVISAKTFEL-LVQDVPKVAMLS----YSTKGSAKSKLTEATI 223 (332)
T ss_dssp CTTCCSTBTTE-EEEETSSSCS-----SCCHHHHHHHHHHHHHHHHH-HHCSCCEEEEEC----SCSTTSCCSHHHHHHH
T ss_pred CCCCCCCCCCE-EEEECCCCEE-----CCCHHHHHHHHHHHHHHHHH-CCCCCCCEEEEE----ECCCCCCCCCHHHHHH
T ss_conf 03445677863-9984653310-----87689999999999999986-124455056775----1256798772046679
Q ss_pred HHHHHHHH--CCCCCCCCCCCHHHEECCCC----------CCCCEEEEEECCHHHHHHHHH-CCCCEEE---EEEE--CC
Q ss_conf 58886421--58764345551121000223----------667689998512022555541-4477279---9920--87
Q gi|254780397|r 235 PAITYLRN--DNKNIIGPLPADSMFHHSAR----------QCYDVAICMYHDQALIPIKTL-DFNQTVN---ITLG--LP 296 (343)
Q Consensus 235 PaI~~~~~--~g~~v~GP~paDt~F~~~~~----------~~~D~vlamYHDQglip~K~l-~f~~~Vn---~t~G--Lp 296 (343)
-|.+.+++ .++.|+||+..|.++.+..+ ++-|+.|.=-=|-|-|..|++ .|.++.. +-.| -|
T Consensus 224 ~a~~~~~~~~~~~~vdGemq~D~Al~~~~a~~k~~~s~v~G~AnvLIfPnl~agNi~yK~l~~~~~a~~~Gpil~G~~~P 303 (332)
T d2af4c1 224 ASTKLAQELAPDIAIDGELQVDAAIVPKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQRLAKAEAYGPITQGLAKP 303 (332)
T ss_dssp HHHHHHHHHCTTSEEEEEECHHHHHCHHHHHHHSTTCSSTTSCCEEECSSHHHHHHHHHHHHHTSCCEEEEEEEESBSSC
T ss_pred HHHHHHHHHCCCCEECCCHHHHHCCCHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCEEECCHHHCCCCC
T ss_conf 99999860488922415202422138877874189997789899899488178689999999843984875043268998
Q ss_pred EEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 6475588755222133686683899999999999998520
Q gi|254780397|r 297 FVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQLGYQKN 336 (343)
Q Consensus 297 ~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~~~~~~ 336 (343)
+.-+|.. ++.+..++.+-+|+-.|..++
T Consensus 304 v~~~sR~------------~s~~~i~~~~alaa~~A~~~~ 331 (332)
T d2af4c1 304 INDLSRG------------CSDEDIVGAVAITCVQAAAQD 331 (332)
T ss_dssp EEECCTT------------CCHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCC------------CCHHHHHHHHHHHHHHHHHHC
T ss_conf 7878999------------998999999999999987403
No 4
>d1r5ja_ c.77.1.5 (A:) Phosphotransacetylase Pta {Streptococcus pyogenes [TaxId: 1314]}
Probab=98.94 E-value=7.3e-09 Score=70.90 Aligned_cols=277 Identities=14% Similarity=0.106 Sum_probs=157.5
Q ss_pred CCCCEEEECCCCCCCCHHHHHHHHCCCCHHCCCCEEEECCHHHHHHHHHHCCCCCC-EEECCCCHHCCCCCCCEEEECCC
Q ss_conf 88838997189877478999998428523248989999399999999998189974-47538610111267853761033
Q gi|254780397|r 3 EFLPLILTQGDPAGIGPDISLKAWASRQITAIPPFIYIGDVDVLNARAKQLNLSVP-LYETDCKNAVSIFKKALPIISSP 81 (343)
Q Consensus 3 k~~pI~IT~GDPaGIGpEIilKal~~~~~~~~~~~viigd~~~l~~~~k~l~~~~~-i~~i~~~~~~~~~~~~i~i~~~~ 81 (343)
+.++|++.-|+ -++++ +|...-.-...+.||++|+.+.++..++.++++.. +..+++.+..... .....+
T Consensus 17 ~~krIvfaEge----D~rvl-~Aa~~~~~~gi~~pILvG~~~~I~~~~~~~gl~~~~ieIid~~~~~~~~-~~~~~~--- 87 (329)
T d1r5ja_ 17 KNMKIVFPEGN----DERVV-RAAARLKFEGLLEPIILGQSEEVRNLLTKLGFADQDYTIINPNEYADFD-KMKEAF--- 87 (329)
T ss_dssp SCCEEEESCSS----CHHHH-HHHHHHHTTTSCEEEEBSCHHHHHHHHHHTTCCCSSCCCBCSSSCTTHH-HHHHHH---
T ss_pred CCCEEEECCCC----CHHHH-HHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCHHHHH-HHHHHH---
T ss_conf 89989971889----98999-9999999879868999779999999999769995465554667678899-999999---
Q ss_pred CCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHH-HHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 3220013553-100000246778877664301234304432234477-76410132564789999834235886652112
Q gi|254780397|r 82 CGAKIVTGTP-NPQTASSTIANIEKAVSLTLSGQALAIVTNPIAKFL-LYQEKFKFPGHTEFLAELAKKNTGITFKPVMM 159 (343)
Q Consensus 82 ~~~~~~~G~~-s~~~g~~~~~sl~~A~~l~~~g~~~alVT~PInK~~-l~~aG~~f~GhTE~La~~~~~~~~~~~~~~Ml 159 (343)
....-++. ...+.+..-+....|+.++..|.+||+|+|-++... ......+-.| ..........+++
T Consensus 88 --~~~rk~~~~~~~a~~~~~d~~~~a~~mv~~G~aD~~v~G~~~~t~~~lr~~l~~i~---------~~~~~~~~s~~~~ 156 (329)
T d1r5ja_ 88 --VEVRKGKATLEDADKMLRDVNYFGVMLVKMGLADGMVSGAIHSTADTVRPALQIIK---------TKPGISRTSGVFL 156 (329)
T ss_dssp --HHHHTTTCCHHHHHHHTTSHHHHHHHHHHTTSCSEEEECSSSCSHHHHHHHHHSSC---------BCTTCSSCEEEEE
T ss_pred --HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHEEECC---------CCCCCCCCHHEEE
T ss_conf --99872787299999997516788999997597412541300015775333100035---------7653211000244
Q ss_pred CCCCCC-EEEE-ECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 332211-2665-30453133343201024567888989999985313456707999636654453100001210244588
Q gi|254780397|r 160 LSGPQL-RTVP-VTIHIPIADICRILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAI 237 (343)
Q Consensus 160 l~~~~L-~V~l-~TtHiPLk~V~~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI 237 (343)
|...+. ++.. .=++|- -.=|.+.+.+-+....+.. +.||+. ||+|+++.- |.|.=-.+..+...-|.
T Consensus 157 ~~~~~~~~~l~~tD~avn-----~~P~~eqla~Ia~~aa~~a-r~lg~e-PkVAlLS~S----~~gs~~~~s~~~~~~a~ 225 (329)
T d1r5ja_ 157 MNRENTSERYVFADCAIN-----IDPTAQELAEIAVNTAETA-KIFDID-PKIAMLSFS----TKGSGKAPQVDKVREAT 225 (329)
T ss_dssp EEEGGGTEEEEESCSSSC-----SSCCHHHHHHHHHHHHHHH-HHTTCC-CCEEEECSC----STTSSCSHHHHHHHHHH
T ss_pred EECCCCCCEEEEECCEEE-----CCCCHHHHHHHHHHHHHHH-HHHCCC-CCEEEEECC----CCCCCCCCHHHHHHHHH
T ss_conf 412466643897235211-----4888899999999999999-861756-625765205----67896420178999999
Q ss_pred HHHHHC--CCCCCCCCCCHHHEECCCC----------CCCCEEEEEECCHHHHHHHHHCCCCE---EE-EEEEC--CEEE
Q ss_conf 864215--8764345551121000223----------66768999851202255554144772---79-99208--7647
Q gi|254780397|r 238 TYLRND--NKNIIGPLPADSMFHHSAR----------QCYDVAICMYHDQALIPIKTLDFNQT---VN-ITLGL--PFVR 299 (343)
Q Consensus 238 ~~~~~~--g~~v~GP~paDt~F~~~~~----------~~~D~vlamYHDQglip~K~l~f~~~---Vn-~t~GL--p~ir 299 (343)
+.++.+ +..++||+..|.++.+... ++-|+.+.=.=|-|-|..|++-+-.+ +- +..|+ |+.-
T Consensus 226 ~~~~~~~~~~~vdGelq~D~Al~~~~a~~K~~~s~v~G~AnvLIfPnl~agNi~yK~l~~l~~~~~iGpil~G~~~Pv~~ 305 (329)
T d1r5ja_ 226 EIATGLNPDLALDGELQFDAAFVPETAAIKAPDSAVAGQANTFVFPDLQSGNIGYKIAQRLGMFDAIGPILQGLNKPVND 305 (329)
T ss_dssp HHHHHHCTTSCEEEEECHHHHHCHHHHHHHSCSCSSTTCCCEEECSSHHHHHHHHHHHHHTTCCEEEEEEEESBSSCEEE
T ss_pred HHHHHHCCCCCCCCCCHHHHHHCHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCEEECCHHHCCCCCEEE
T ss_conf 99997688954365311777646665532178876578899899088478799999999834980874054478998797
Q ss_pred ECCCCCCCHHHC
Q ss_conf 558875522213
Q gi|254780397|r 300 TSPDHGTAFDIA 311 (343)
Q Consensus 300 tSpdHGTafdia 311 (343)
+|.+- |+-||.
T Consensus 306 ~sr~~-s~~di~ 316 (329)
T d1r5ja_ 306 LSRGS-SAEDIY 316 (329)
T ss_dssp CCTTC-CHHHHH
T ss_pred CCCCC-CHHHHH
T ss_conf 89999-989999
No 5
>d1vmia_ c.77.1.5 (A:) Ethanolamine utilization protein EutD {Escherichia coli [TaxId: 562]}
Probab=98.91 E-value=2.4e-08 Score=67.73 Aligned_cols=285 Identities=12% Similarity=0.090 Sum_probs=167.1
Q ss_pred CCCCEEEECCCCCCCCHHHHHHHHCCCCHHCCCCEEEECCHHHHHHHHHHCCCCCC-EEECCCCHHCCCCCCCEEEECCC
Q ss_conf 88838997189877478999998428523248989999399999999998189974-47538610111267853761033
Q gi|254780397|r 3 EFLPLILTQGDPAGIGPDISLKAWASRQITAIPPFIYIGDVDVLNARAKQLNLSVP-LYETDCKNAVSIFKKALPIISSP 81 (343)
Q Consensus 3 k~~pI~IT~GDPaGIGpEIilKal~~~~~~~~~~~viigd~~~l~~~~k~l~~~~~-i~~i~~~~~~~~~~~~i~i~~~~ 81 (343)
+.++|++.-||= |-+++|.....-...+.||++|+.+.++..++.+++++. +..+++.++.........-
T Consensus 19 ~pkrIvf~Eged-----~rvl~Aa~~~~~egi~~pILvG~~~~I~~~~~~~~l~l~~ieIIdp~~~~~~~~~~~~~---- 89 (329)
T d1vmia_ 19 APARVVFPDALD-----QRVLKAAQYLHQQGLATPILVANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHR---- 89 (329)
T ss_dssp CCCEEEESCCSS-----HHHHHHHHHHHHTTSCEEEEESCHHHHHHHHHHHTCCCTTCEEECTTSCHHHHHHHHHH----
T ss_pred CCCEEEECCCCC-----HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHH----
T ss_conf 799899758799-----89999999999879968999858999999999769997777898566667778999999----
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC-CCCC-CC
Q ss_conf 322001355310000024677887766430123430443223447776410132564789999834235886-6521-12
Q gi|254780397|r 82 CGAKIVTGTPNPQTASSTIANIEKAVSLTLSGQALAIVTNPIAKFLLYQEKFKFPGHTEFLAELAKKNTGIT-FKPV-MM 159 (343)
Q Consensus 82 ~~~~~~~G~~s~~~g~~~~~sl~~A~~l~~~g~~~alVT~PInK~~l~~aG~~f~GhTE~La~~~~~~~~~~-~~~~-Ml 159 (343)
+ ....-+....++-+...+....|+.++..|++|++|+|-++...... +.+-+..+...+.. ...+ ||
T Consensus 90 ~-~~r~~~~~~~~a~~~~~d~~~~Aa~mv~~G~aD~lv~G~~~~~~~~l---------~~~~~iig~~~~~~~~s~~~~m 159 (329)
T d1vmia_ 90 W-LARAGEKTPPDALEKLTDPLMFAAAMVSAGKADVCIAGNLSSTANVL---------RAGLRIIGLQPGCKTLSSIFLM 159 (329)
T ss_dssp H-HHHHGGGCCTTHHHHTTSHHHHHHHHHHTTSCSEEEECSSSCHHHHH---------HHHHHHTCBCTTCCCCEEEEEE
T ss_pred H-HHHHCCCCHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCHHHHH---------HHHHHHCCCCCCCCEEEEEEEE
T ss_conf 9-99847888999999861363786665505752178526757789998---------7777405877642100025787
Q ss_pred C-CCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 3-322112665304531333432010245678889899999853134567079996366544531000012102445888
Q gi|254780397|r 160 L-SGPQLRTVPVTIHIPIADICRILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAIT 238 (343)
Q Consensus 160 l-~~~~L~V~l~TtHiPLk~V~~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~ 238 (343)
+ .+++--+.+.=+++- -.=|.+.+.+-.....+..++.+| ..||+|+++.. |.|.--.|......-|.+
T Consensus 160 ~~~~~~~~lf~~D~~vn-----~~P~~eqla~Ia~~aa~~a~~l~g-~~PkVAlLS~S----~~gs~~~~s~~~~~~a~~ 229 (329)
T d1vmia_ 160 LPQYSGPALGFADCSVV-----PQPTAAQLADIALASAETWRAITG-EEPRVAMLSFS----SNGSARHPCVANVQQATE 229 (329)
T ss_dssp EESSSCCCEEEESSSSC-----SSCCHHHHHHHHHHHHHHHHHHHS-SCCEEEEECSC----STTSSCSHHHHHHHHHHH
T ss_pred ECCCCCCEEEEECCCCC-----CCCCHHHHHHHHHHHHHHHHHHCC-CCCCCCEEEEE----CCCCCCCHHHHHHHHHHH
T ss_conf 41678716998315776-----577899999999858999998577-43332246540----467776334799999999
Q ss_pred HHHHC--CCCCCCCCCCHHHEECCC----------CCCCCEEEEEECCHHHHHHHHHC-CCCE--EE-EEEEC--CEEEE
Q ss_conf 64215--876434555112100022----------36676899985120225555414-4772--79-99208--76475
Q gi|254780397|r 239 YLRND--NKNIIGPLPADSMFHHSA----------RQCYDVAICMYHDQALIPIKTLD-FNQT--VN-ITLGL--PFVRT 300 (343)
Q Consensus 239 ~~~~~--g~~v~GP~paDt~F~~~~----------~~~~D~vlamYHDQglip~K~l~-f~~~--Vn-~t~GL--p~irt 300 (343)
.++++ ++.++||+..|.++.+.. .++-|+.|.=-=|-|-|..|++- |..+ +- +.+|+ |+.-+
T Consensus 230 ~~~~~~~~~~vdGemq~D~Al~~~~~~~k~~~s~~~G~AnvLI~Pnl~agNi~yK~l~~~~~a~~iGpil~G~~~Pv~~~ 309 (329)
T d1vmia_ 230 IVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIGYKIAQRLGGYRAVGPLIQGLAAPMHDL 309 (329)
T ss_dssp HHHHHCTTSEEEEEECHHHHHCHHHHHHHCTTCTTTTCCSEEECSSHHHHHHHHHHHHHHHCEEEEEEEEESBSSCEEEC
T ss_pred HHHHHCCCCEEECCCCHHHHHCHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCEEECHHHHCCCCCEEEC
T ss_conf 99823899679656205443077666245899986897998994885887999999999539828843443679987978
Q ss_pred CCCCCCCHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 5887552221336866838999999999
Q gi|254780397|r 301 SPDHGTAFDIAGSSLTQEESLVSALKIA 328 (343)
Q Consensus 301 SpdHGTafdiagk~~a~~~s~~~ai~~a 328 (343)
|.. ++.+..++.+-+|
T Consensus 310 sr~------------~s~~~i~n~~aia 325 (329)
T d1vmia_ 310 SRG------------CSVQEIIELALVA 325 (329)
T ss_dssp CTT------------CCHHHHHHHHHHH
T ss_pred CCC------------CCHHHHHHHHHHH
T ss_conf 999------------9999999998874
No 6
>d1vi1a_ c.77.1.4 (A:) Fatty acid/phospholipid synthesis protein PlsX {Bacillus subtilis [TaxId: 1423]}
Probab=98.49 E-value=3.4e-06 Score=54.85 Aligned_cols=268 Identities=15% Similarity=0.175 Sum_probs=151.7
Q ss_pred CCEEE-ECCCCCCCCHHHHHHHHCCC-CHHCCCCEEEECCHHHHHHHHHHCCCCCCEEECCCCHHCCCCCCCEEEECCCC
Q ss_conf 83899-71898774789999984285-23248989999399999999998189974475386101112678537610333
Q gi|254780397|r 5 LPLIL-TQGDPAGIGPDISLKAWASR-QITAIPPFIYIGDVDVLNARAKQLNLSVPLYETDCKNAVSIFKKALPIISSPC 82 (343)
Q Consensus 5 ~pI~I-T~GDPaGIGpEIilKal~~~-~~~~~~~~viigd~~~l~~~~k~l~~~~~i~~i~~~~~~~~~~~~i~i~~~~~ 82 (343)
.+|+| .|| .-=||+.+++....- +......++++||.+.++...... +..+.+++.+.
T Consensus 2 irIAvDaMG--GD~~P~~~v~Ga~~al~~~~~~~i~LvG~~~~i~~~l~~~------------------~~~i~Ivha~~ 61 (334)
T d1vi1a_ 2 LRIAVDAMG--GDHAPKAVIDGVIKGIEAFDDLHITLVGDKTTIESHLTTT------------------SDRITVLHADE 61 (334)
T ss_dssp EEEEEESSC--SSSTTHHHHHHHHHHHHHCTTEEEEEEECHHHHHTTCCSC------------------CTTEEEEECCB
T ss_pred EEEEEECCC--CCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHC------------------CCCEEEECCCC
T ss_conf 599998148--7658288999999999878898699995899999998537------------------36649983887
Q ss_pred CCCCCCCC-CCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 22001355-31000002467788776643012343044322344777641013256478999983423588665211233
Q gi|254780397|r 83 GAKIVTGT-PNPQTASSTIANIEKAVSLTLSGQALAIVTNPIAKFLLYQEKFKFPGHTEFLAELAKKNTGITFKPVMMLS 161 (343)
Q Consensus 83 ~~~~~~G~-~s~~~g~~~~~sl~~A~~l~~~g~~~alVT~PInK~~l~~aG~~f~GhTE~La~~~~~~~~~~~~~~Mll~ 161 (343)
. +.... |+..--+---.|+..|++++++|++||+|.+=-.-..+-.+-+ ..+.-.+...-.++
T Consensus 62 ~--I~m~d~p~~alr~kk~SSm~~a~~lvk~g~ada~VSaGnTGAl~a~a~~-----------~l~~i~gi~RPaia--- 125 (334)
T d1vi1a_ 62 V--IEPTDEPVRAVRRKKNSSMVLMAQEVAENRADACISAGNTGALMTAGLF-----------IVGRIKGIDRPALA--- 125 (334)
T ss_dssp C--CCTTSCHHHHHHHCTTBHHHHHHHHHHTTSCSEEEECSCHHHHHHHHHH-----------TTCBCTTCSSCEEE---
T ss_pred C--CCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH-----------HHHHHCCCCHHHHH---
T ss_conf 3--1588622578884433159999998641455727853675455765876-----------67531243100333---
Q ss_pred CCCCEEEEECCC-C--CHHHHHHH--CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHH
Q ss_conf 221126653045-3--13334320--102456788898999998531345670799963665445310000121024458
Q gi|254780397|r 162 GPQLRTVPVTIH-I--PIADICRI--LSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPA 236 (343)
Q Consensus 162 ~~~L~V~l~TtH-i--PLk~V~~~--it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~Pa 236 (343)
+.+=|.+ - =|-|+=.+ .+.+.+.+...+=.-..+..+++++||++++-. |+.-.-|+|. +.-|
T Consensus 126 -----~~~Pt~~g~~~vllD~GAN~~~~~~~L~qFA~mG~~ya~~~~~~~~P~VgLLNi----G~E~~KG~~~---~k~a 193 (334)
T d1vi1a_ 126 -----PTLPTVSGDGFLLLDVGANVDAKPEHLVQYAIMGSVYSQQVRGVTSPRVGLLNV----GTEDKKGNEL---TKQT 193 (334)
T ss_dssp -----CEECCSSSCCEEEECSSSCSSCCHHHHHHHHHHHHHHHHHTSCCSSCEEEEEES----SSSTTCSCHH---HHHH
T ss_pred -----EECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC----CCCCCCCCHH---HHHH
T ss_conf -----017777787628971786767881999999999999999848975434676404----4556664378---9999
Q ss_pred HHHHHH-CCCCCCCCCCCHHHEECCCCCCCCEEEEEECCHHHHHHHHHC-------------------------------
Q ss_conf 886421-587643455511210002236676899985120225555414-------------------------------
Q gi|254780397|r 237 ITYLRN-DNKNIIGPLPADSMFHHSARQCYDVAICMYHDQALIPIKTLD------------------------------- 284 (343)
Q Consensus 237 I~~~~~-~g~~v~GP~paDt~F~~~~~~~~D~vlamYHDQglip~K~l~------------------------------- 284 (343)
-+.+++ ..++..|.+-++-+|. ++.|+|||==+ -|-+.+|+..
T Consensus 194 ~~lL~~~~~~nf~GniEg~di~~----g~~DVvV~DGF-tGNv~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l 268 (334)
T d1vi1a_ 194 FQILKETANINFIGNVEARDLLD----DVADVVVTDGF-TGNVTLKTLEGSALSIFKMMRDVMTSTLTSKLAAAVLKPKL 268 (334)
T ss_dssp HHHHHSCTTSEEEEEEEGGGGGG----TSCSEEECCHH-HHHHHHHHHHHHHHHHHHHHHHHHTTTC-------CCHHHH
T ss_pred HHHHHHCCCCCEEEEECCEECCC----CCEEEEEECCC-HHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 98753137844266522200247----83689997560-04578776211588999999987612226678888789999
Q ss_pred ---------CCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf ---------477279992087647558875522213368668389999999999999852
Q gi|254780397|r 285 ---------FNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQLGYQK 335 (343)
Q Consensus 285 ---------f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~~~~~ 335 (343)
-..+=-.-|||.=+. |.+.|.++...+.+||++|.++++++
T Consensus 269 ~~l~~~~d~~~~gGa~lLGlng~v----------ik~HG~S~~~ai~nAI~~a~~~v~~~ 318 (334)
T d1vi1a_ 269 KEMKMKMEYSNYGGASLFGLKAPV----------IKAHGSSDSNAVFRAIRQAREMVSQN 318 (334)
T ss_dssp HHHHHHHCGGGSCCEEEETBSSCE----------EECCTTCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCCCCCCEEEECCCCCE----------EEECCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 999875790103986897168218----------99279999899999999999999868
No 7
>d1u7na_ c.77.1.4 (A:) Fatty acid/phospholipid synthesis protein PlsX {Enterococcus faecalis [TaxId: 1351]}
Probab=98.10 E-value=2.8e-05 Score=49.41 Aligned_cols=262 Identities=16% Similarity=0.166 Sum_probs=150.9
Q ss_pred CEEE-ECCCCCCCCHHHHHHHHCCC-CHHCCCCEEEECCHHHHHHHHHHCCCCCCEEECCCCHHCCCCCCCEEEECCCCC
Q ss_conf 3899-71898774789999984285-232489899993999999999981899744753861011126785376103332
Q gi|254780397|r 6 PLIL-TQGDPAGIGPDISLKAWASR-QITAIPPFIYIGDVDVLNARAKQLNLSVPLYETDCKNAVSIFKKALPIISSPCG 83 (343)
Q Consensus 6 pI~I-T~GDPaGIGpEIilKal~~~-~~~~~~~~viigd~~~l~~~~k~l~~~~~i~~i~~~~~~~~~~~~i~i~~~~~~ 83 (343)
+|+| .|| .-=||+.+++..... +......++++||.+.++.. +.. ...+.+++.+..
T Consensus 2 rIAvDaMG--GD~gP~~~v~Ga~~al~~~~d~~i~LvG~e~~i~~~---l~~----------------~~~l~Ivha~~~ 60 (329)
T d1u7na_ 2 KIAVDAMG--GDNAPQAIVEGVMLAKQDFPDIEFQLYGKEAEIKKY---ITD----------------EKNITIIHTDEK 60 (329)
T ss_dssp EEEEESSC--STTTTHHHHHHHHHHHHHCTTCEEEEEECHHHHHTT---CSC----------------CTTEEEEECSCC
T ss_pred EEEEECCC--CCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHH---HCC----------------CCCEEEEECCCC
T ss_conf 89998158--765808899999999987889779999399999987---532----------------578089968986
Q ss_pred CCCCCCCCCCCCCHHHH-----HHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 20013553100000246-----7788776643012343044322344777641013256478999983423588665211
Q gi|254780397|r 84 AKIVTGTPNPQTASSTI-----ANIEKAVSLTLSGQALAIVTNPIAKFLLYQEKFKFPGHTEFLAELAKKNTGITFKPVM 158 (343)
Q Consensus 84 ~~~~~G~~s~~~g~~~~-----~sl~~A~~l~~~g~~~alVT~PInK~~l~~aG~~f~GhTE~La~~~~~~~~~~~~~~M 158 (343)
+... +....++ .|+..|++++++|++||+|++=-.-..+-.+-+. | +.-.+.. .|..
T Consensus 61 --I~md----d~P~~alR~kk~SSm~~a~~lvk~g~ada~VSaGnTGAl~a~a~~~-------l----~~i~gv~-RPai 122 (329)
T d1u7na_ 61 --IASD----DEPVKAIRRKKTASMVLAAQAVKNGEADAIFSAGNTGALLAAGLFI-------V----GRIKNVE-RPGL 122 (329)
T ss_dssp --CCTT----CCHHHHHHHCTTSHHHHHHHHHHHTSCSEEEESSCHHHHHHHHHHT-------T----CBCTTCS-SCEE
T ss_pred --CCCC----CCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEH-------H----CCCCCCC-CEEE
T ss_conf --3689----8777898742342488999998743355675437875257652001-------1----3425643-1024
Q ss_pred CCCCCCCEEEEEC-----CCCCHHHHHHHC--CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCH
Q ss_conf 2332211266530-----453133343201--024567888989999985313456707999636654453100001210
Q gi|254780397|r 159 MLSGPQLRTVPVT-----IHIPIADICRIL--STKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKN 231 (343)
Q Consensus 159 ll~~~~L~V~l~T-----tHiPLk~V~~~i--t~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~ 231 (343)
-+.+=| .|.=|-||=.++ +.+.+.+...+=.-..+..+|+++||++++-. |+.-.-|+|.
T Consensus 123 -------a~~~Pt~~~~~~~~~llD~GAN~~~~~~~L~qFA~mG~~ya~~v~~~~~P~VgLLNi----G~E~~KG~~~-- 189 (329)
T d1u7na_ 123 -------MSTLPVMGEPDKGFDMLDLGANADNKPEHLVQYAVLGSFYAEKVRNVQNPRVGLLNN----GTEETKGSEL-- 189 (329)
T ss_dssp -------EEEEECTTCTTCEEEEECSSSCSCCCHHHHHHHHHHHHHHHHHTTCCSSCCEEEECS----CC----CCHH--
T ss_pred -------EEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC----HHHHCCCCHH--
T ss_conf -------575566678888559996787877798999999999888999838985434766324----2321024699--
Q ss_pred HHHHHHHHHHH-CCCCCCCCCCCHHHEECCCCCCCCEEEEEECCHHHHHHHHHC--------------CCCE--------
Q ss_conf 24458886421-587643455511210002236676899985120225555414--------------4772--------
Q gi|254780397|r 232 IIIPAITYLRN-DNKNIIGPLPADSMFHHSARQCYDVAICMYHDQALIPIKTLD--------------FNQT-------- 288 (343)
Q Consensus 232 iI~PaI~~~~~-~g~~v~GP~paDt~F~~~~~~~~D~vlamYHDQglip~K~l~--------------f~~~-------- 288 (343)
+.-|-+.+++ ..++..|-+-++-+|. ++.|+|||== =-|-+.+|+.. |.++
T Consensus 190 -~k~a~~lL~~~~~~nf~GnvEg~di~~----g~~DVvV~DG-FtGNi~LKt~EG~~~~i~~~lk~~~~~~~~~~~~g~l 263 (329)
T d1u7na_ 190 -TKKAFELLAADETINFVGNVEARELLN----GVADVVVTDG-FTGNAVLKSIEGTAMNMMSLLKTAILSEGVKGKMGAL 263 (329)
T ss_dssp -HHHHHHHHHHCTTSCEEEEECGGGGGG----CSCSEEECCH-HHHHHHHHHHHHHHHHHHHHHHHHHTC-------CHH
T ss_pred -HHHHHHHHHHCCCCCEEEEECCCCCCC----CCCCEEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf -999999863135865046623763558----8665899744-1124999987679999999999987202256677899
Q ss_pred -------------------EEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -------------------79992087647558875522213368668389999999999999852
Q gi|254780397|r 289 -------------------VNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQLGYQK 335 (343)
Q Consensus 289 -------------------Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~~~~~ 335 (343)
=.+-|||.=+. |.+-|.+++.++.+||++|.++++++
T Consensus 264 l~~~~l~~~~~~~d~~~~gGa~lLGl~g~v----------ik~HG~S~~~a~~nAI~~a~~~~~~~ 319 (329)
T d1u7na_ 264 LLKNALHGMKDEMDYSKHGGAVLFGLKAPV----------IKTHGATGPDAVRYTIRQIHTMLETQ 319 (329)
T ss_dssp HHHHHHHHHHHHTCGGGGCCEEEETBSSCE----------EECCTTCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCCCCCEEEECCCCCE----------EECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 999999999876890007988897488318----------98378999899999999999999858
No 8
>d1pb1a_ c.77.1.1 (A:) Isocitrate dehydrogenase, ICDH {Escherichia coli [TaxId: 562]}
Probab=97.60 E-value=4.8e-05 Score=47.95 Aligned_cols=68 Identities=22% Similarity=0.292 Sum_probs=52.0
Q ss_pred CCCCCEEEE--EEC----CHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 366768999--851----2022555541447727999208764755887552221336866838999999999999
Q gi|254780397|r 262 RQCYDVAIC--MYH----DQALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQL 331 (343)
Q Consensus 262 ~~~~D~vla--mYH----DQglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~ 331 (343)
-.+||++|+ ||= |.+-.-.=.+++--+.|+ |-.+-...|-||||.||||||+|||.+|+-|.-+.++-
T Consensus 293 P~~fdViv~~NlfGDIlSDlaa~l~GglGl~pSani--g~~~a~fEp~HGSAPdiaGk~iANP~a~Ils~amML~~ 366 (416)
T d1pb1a_ 293 PAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANI--GDECALFEATHGTAPKYAGQDKVNPGSIILSAEMMLRH 366 (416)
T ss_dssp GGGCCEEEECHHHHHHHHHHHHHHTTCTTTCCCEEE--CSSCEEEECCSCCCGGGTTSSCSCCHHHHHHHHHHHHH
T ss_pred CCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf 046778961357877777788886237665445466--87724887788861554799975929999999999998
No 9
>d1vlca_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thermotoga maritima [TaxId: 2336]}
Probab=97.47 E-value=7.2e-05 Score=46.91 Aligned_cols=136 Identities=15% Similarity=0.198 Sum_probs=78.7
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC-CCCCCHHHEEC
Q ss_conf 20102456788898999998531345670799963665445310000121024458886421587643-45551121000
Q gi|254780397|r 181 RILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLRNDNKNII-GPLPADSMFHH 259 (343)
Q Consensus 181 ~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~g~~v~-GP~paDt~F~~ 259 (343)
+.+|+..+.+-++...+.-++ + +.++-++ .-. |.+. . + ....-+.++.-++--+|. -..-.|.+-..
T Consensus 165 ~~~t~~~~~Riar~Af~~A~~--~--~k~Vt~v--~K~---Nv~~-~-~-~lf~~~~~eva~~yp~I~~~~~~vD~~~~~ 232 (362)
T d1vlca_ 165 MIYDRKTVERIARTAFEIAKN--R--RKKVTSV--DKA---NVLY-S-S-MLWRKVVNEVAREYPDVELTHIYVDNAAMQ 232 (362)
T ss_dssp CCCCHHHHHHHHHHHHHHHHT--T--TSEEEEE--ECT---TTCH-H-H-HHHHHHHHHHHTTCTTSEEEEEEHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHHHHC--C--CCCEEEE--ECC---CCCC-C-H-HHHHHHHHHHHHHCCCEEEEEEHHHHHHHH
T ss_conf 994347878999999999861--8--9807999--437---7520-1-5-899999999996679869997309899999
Q ss_pred C--CCCCCCEEEE--EECC----HHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 2--2366768999--8512----022555541447727999208764755887552221336866838999999999999
Q gi|254780397|r 260 S--ARQCYDVAIC--MYHD----QALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQL 331 (343)
Q Consensus 260 ~--~~~~~D~vla--mYHD----Qglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~ 331 (343)
- .-.+||++|+ ||-| .+..-.=.+++--+.|+ |-.. -.-|-||||.||||||+|||.+|+-|.-+-++-
T Consensus 233 lv~~P~~fdViv~~Nl~GDIlSDl~a~l~GglGl~ps~ni--g~~~-~fE~~HGSApdiaGk~iaNP~a~ils~ammL~~ 309 (362)
T d1vlca_ 233 LILKPSQFDVILTTNMFGDILSDESAALPGSLGLLPSASF--GDKN-LYEPAGGSAPDIAGKNIANPIAQILSLAMMLEH 309 (362)
T ss_dssp HHHCGGGCSEEEECHHHHHHHHHHHTTSSSCGGGCEEEEE--SSSE-EEEESSCCCTTTTTTTCSCCHHHHHHHHHHHHH
T ss_pred HHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCEEEE--CCHH-HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 9866577758985306666777899998513332101210--4223-231256862010589864809999999999873
No 10
>d1wpwa_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Sulfolobus tokodaii [TaxId: 111955]}
Probab=97.44 E-value=0.00017 Score=44.62 Aligned_cols=139 Identities=17% Similarity=0.190 Sum_probs=84.8
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHEECC
Q ss_conf 20102456788898999998531345670799963665445310000121024458886421587643455511210002
Q gi|254780397|r 181 RILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLRNDNKNIIGPLPADSMFHHS 260 (343)
Q Consensus 181 ~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~g~~v~GP~paDt~F~~~ 260 (343)
+.+|+....+-++...+.-++ . .++-..|---|=.---.|++-..-.+ .....+.. .-.-.|++-..-
T Consensus 139 ~~~tr~~~eRI~r~AFe~A~~--r-~~kvt~v~Kanvl~~~~g~f~~~~~~--------v~~~~i~~-~~~~vD~~~~~l 206 (336)
T d1wpwa_ 139 KIITRFASERIAKVGLNFALR--R-RKKVTCVHKANVMRITDGLFAEACRS--------VLKGKVEY-SEMYVDAAAANL 206 (336)
T ss_dssp EEEEHHHHHHHHHHHHHHHHT--T-TSEEEEEECTTTCTTHHHHHHHHHHH--------HHTTTSEE-EEEEHHHHHHHH
T ss_pred EEEEEECHHHHHHHHHHHHHH--C-CCEEEEEECCCEEEEECCCCEEEEEE--------EEEEEEEE-EEHHHHHHHHHH
T ss_conf 987420011365655777876--6-98179875265332202342468998--------63006998-201344567766
Q ss_pred --CCCCCCEEEEE--E----CCHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf --23667689998--5----120225555414477279992087647558875522213368668389999999999999
Q gi|254780397|r 261 --ARQCYDVAICM--Y----HDQALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQLG 332 (343)
Q Consensus 261 --~~~~~D~vlam--Y----HDQglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~~ 332 (343)
.-.+||++|+- | .|.+.--+-.++.--+.|+.-+. --.-|-||||.||||||+|||.+|+-|.-+-++..
T Consensus 207 v~~P~~fdViv~~Nl~GDIlSDl~a~l~G~lGl~ps~nig~~~--a~fEp~HGsApdiaGk~iaNP~A~Ils~ammL~~l 284 (336)
T d1wpwa_ 207 VRNPQMFDVIVTENVYGDILSDEASQIAGSLGIAPSANIGDKK--ALFEPVHGAAFDIAGKNIGNPTAFLLSVSMMYERM 284 (336)
T ss_dssp HHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECSSC--EEEEESSCCCTTTTTSSCCCTHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEECCCCCCCCCC--EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 5187664388753577776667888760773001254569974--22246665330248988779199999999999985
Q ss_pred H
Q ss_conf 8
Q gi|254780397|r 333 Y 333 (343)
Q Consensus 333 ~ 333 (343)
.
T Consensus 285 g 285 (336)
T d1wpwa_ 285 Y 285 (336)
T ss_dssp H
T ss_pred C
T ss_conf 6
No 11
>d1cnza_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Salmonella typhimurium [TaxId: 90371]}
Probab=97.40 E-value=0.00012 Score=45.56 Aligned_cols=137 Identities=12% Similarity=0.256 Sum_probs=80.2
Q ss_pred HCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCCCHHHEECC
Q ss_conf 010245678889899999853134567079996366544531000012102445888642158764-3455511210002
Q gi|254780397|r 182 ILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLRNDNKNI-IGPLPADSMFHHS 260 (343)
Q Consensus 182 ~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~g~~v-~GP~paDt~F~~~ 260 (343)
.+|+..+.+-++...+.-++. .+ | |....... .+- . .....-+.++..++--+| ....-.|.+..+-
T Consensus 166 ~~t~~~~~ri~r~Af~~A~~r---~~-k--Vt~v~KaN----v~k-~-~~lf~~~~~eva~~yp~I~~~~~~vD~~~~~l 233 (363)
T d1cnza_ 166 VYHRFEIERIARIAFESARKR---RR-K--VTSIDKAN----VLQ-S-SILWREIVNDVAKTYPDVELAHMYIDNATMQL 233 (363)
T ss_dssp EEEHHHHHHHHHHHHHHHHTT---TS-E--EEEEECTT----TCH-H-HHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHH
T ss_pred EEEHHHHHHHHHHHHHHHHHC---CC-C--EEEECCCC----CEE-E-HHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHH
T ss_conf 764899999999999999966---99-5--68981375----330-4-48789999998622887497517665899998
Q ss_pred --CCCCCCEEEE--EE----CCHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf --2366768999--85----12022555541447727999208764755887552221336866838999999999999
Q gi|254780397|r 261 --ARQCYDVAIC--MY----HDQALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQL 331 (343)
Q Consensus 261 --~~~~~D~vla--mY----HDQglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~ 331 (343)
.-..||++|+ || .|.+.--+-.+++--+.|+... .+---.|-||||.||||||+|||.+|+-|.-+-++.
T Consensus 234 v~~P~~fdViv~~Nl~GDIlSDl~a~l~GglG~~~s~ni~~~-~~a~fEp~HGsapdiaGk~~aNP~a~Ils~ammL~~ 311 (363)
T d1cnza_ 234 IKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQ-GFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRY 311 (363)
T ss_dssp HHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTT-SCEEEEESSCCCGGGTTTTCSCCHHHHHHHHHHHHH
T ss_pred HHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHEEEECC-CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 645577766642357777678899887504542111034036-407851677765334798864909999999999984
No 12
>d1hqsa_ c.77.1.1 (A:) Isocitrate dehydrogenase, ICDH {Bacillus subtilis [TaxId: 1423]}
Probab=97.36 E-value=9.8e-05 Score=46.10 Aligned_cols=81 Identities=17% Similarity=0.169 Sum_probs=54.9
Q ss_pred CCCHHHEEC--CCCCCCCEEEE--EECC----HHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHH
Q ss_conf 551121000--22366768999--8512----022555541447727999208764755887552221336866838999
Q gi|254780397|r 251 LPADSMFHH--SARQCYDVAIC--MYHD----QALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLV 322 (343)
Q Consensus 251 ~paDt~F~~--~~~~~~D~vla--mYHD----Qglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~ 322 (343)
.-+|.+..+ ..-.+||++|+ ||=| .+---.=.++.--+.|+--+=.+----|-||||.||||||+|||.+|+
T Consensus 284 ~~vD~~~~~lv~~P~~fDVIvt~NlfGDILSDlaa~l~GglGl~pSanig~~~~~a~fEp~HGSAPdiAGk~iANP~a~I 363 (423)
T d1hqsa_ 284 SIADIFLQQILTRPNEFDVVATMNLNGDYISDALAAQVGGIGIAPGANINYETGHAIFEATHGTAPKYAGLDKVNPSSVI 363 (423)
T ss_dssp EEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCTTTCEEEEECTTTCCEEEEESCCCCGGGTTTTCSCCHHHH
T ss_pred HHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEECCCCCHHHHCCCCCCCHHHHH
T ss_conf 89999999998564677789751411566767888752887665510248998857986787861654699854969999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780397|r 323 SALKIAAQL 331 (343)
Q Consensus 323 ~ai~~a~~~ 331 (343)
-|.-+-++-
T Consensus 364 lS~amML~~ 372 (423)
T d1hqsa_ 364 LSGVLLLEH 372 (423)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999999998
No 13
>d1t0la_ c.77.1.1 (A:) NADP-dependent isocitrate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.03 E-value=9.3e-05 Score=46.25 Aligned_cols=82 Identities=12% Similarity=-0.010 Sum_probs=53.6
Q ss_pred CCHHHEECC-CCCCCCEEEEE--EC----CHHHHHHHHHCCCCEEEEEEECCE------EEECCCCCCCHHHCCCCCCCH
Q ss_conf 511210002-23667689998--51----202255554144772799920876------475588755222133686683
Q gi|254780397|r 252 PADSMFHHS-ARQCYDVAICM--YH----DQALIPIKTLDFNQTVNITLGLPF------VRTSPDHGTAFDIAGSSLTQE 318 (343)
Q Consensus 252 paDt~F~~~-~~~~~D~vlam--YH----DQglip~K~l~f~~~Vn~t~GLp~------irtSpdHGTafdiagk~~a~~ 318 (343)
-.|.+...- ...+||++|+. |= |.+-.-.--+++--+.|+--.-.+ ==+-|+||+|+||||||+|||
T Consensus 250 ~~Da~~~~~~~~p~fdVivt~NLfGDILSDl~a~l~GglGl~pSanig~~~~~~~fe~~hg~aP~hGsapdiAGk~iANP 329 (414)
T d1t0la_ 250 LIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNP 329 (414)
T ss_dssp EHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSSCEEEECSSCCCHHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC
T ss_conf 77789874148988728997674530566566562577431210115764334412355555543221001377665390
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 899999999999998
Q gi|254780397|r 319 ESLVSALKIAAQLGY 333 (343)
Q Consensus 319 ~s~~~ai~~a~~~~~ 333 (343)
.+++-|.-+.++-.-
T Consensus 330 ~A~ILS~amML~~lg 344 (414)
T d1t0la_ 330 IASIFAWTRGLAHRA 344 (414)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 999999999999852
No 14
>d1w0da_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.97 E-value=0.00025 Score=43.68 Aligned_cols=139 Identities=12% Similarity=0.163 Sum_probs=73.4
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC--CCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCCCHHH
Q ss_conf 320102456788898999998531345670799963665445--31000012102445888642158764-345551121
Q gi|254780397|r 180 CRILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGE--NATIGIEEKNIIIPAITYLRNDNKNI-IGPLPADSM 256 (343)
Q Consensus 180 ~~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE--~G~~G~EE~~iI~PaI~~~~~~g~~v-~GP~paDt~ 256 (343)
.+.+|+..+.+-++...+.-++. +.++-++ =..+.=. .|+| .-+.++..++--++ .-..-.|.+
T Consensus 148 ~~~~t~~~~~Ri~~~Af~~A~~~----r~~Vt~v-~KaNv~~~t~g~f--------~~~~~~va~~yp~i~~~~~~vD~~ 214 (337)
T d1w0da_ 148 VSVNTAFGVRRVVADAFERARRR----RKHLTLV-HKTNVLTFAGGLW--------LRTVDEVGECYPDVEVAYQHVDAA 214 (337)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHT----TSEEEEE-ECTTTSHHHHHHH--------HHHHHHHHTTCTTSEEEEEEHHHH
T ss_pred EEEECCHHEEEHHHHHHHHHHCC----CCEEEEE-ECCCHHHHHHHHH--------HHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 98611200243033455676536----8548999-8751000247999--------988888740388503445647889
Q ss_pred EECCCC--CCCCEEEE--EECC----HHHHHHHHHCCCCEEEEEEEC-CEEEECCCCCCCHHHCCCCCCCHHHHHHHHHH
Q ss_conf 000223--66768999--8512----022555541447727999208-76475588755222133686683899999999
Q gi|254780397|r 257 FHHSAR--QCYDVAIC--MYHD----QALIPIKTLDFNQTVNITLGL-PFVRTSPDHGTAFDIAGSSLTQEESLVSALKI 327 (343)
Q Consensus 257 F~~~~~--~~~D~vla--mYHD----Qglip~K~l~f~~~Vn~t~GL-p~irtSpdHGTafdiagk~~a~~~s~~~ai~~ 327 (343)
..+-.+ .+||++|+ ||=| .+---.=.+++--+.|+--.- .+----|-||||.||||||+|||.+|+-|.-+
T Consensus 215 ~~~lv~~P~~fdViv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~~a~fEp~HGsApdiaGk~iANP~a~IlS~am 294 (337)
T d1w0da_ 215 TIHMITDPGRFDVIVTDNLFGDIITDLAAAVCGGIGLAASGNIDATRANPSMFEPVHGSAPDIAGQGIADPTAAIMSVAL 294 (337)
T ss_dssp HHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCGGGCEEEEECTTCSSCEEEEESSCCCGGGTTSSCSCCHHHHHHHHH
T ss_pred HHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHCCCCCCCCHHHHHHHHH
T ss_conf 99998523455603331788888888888744786657763322111341001356675065569996592999999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780397|r 328 AAQL 331 (343)
Q Consensus 328 a~~~ 331 (343)
-++-
T Consensus 295 ML~~ 298 (337)
T d1w0da_ 295 LLSH 298 (337)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9998
No 15
>d1g2ua_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thermus thermophilus [TaxId: 274]}
Probab=96.85 E-value=0.00079 Score=40.66 Aligned_cols=137 Identities=15% Similarity=0.251 Sum_probs=81.5
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCCCCCCHHHE
Q ss_conf 3201024567888989999985313456707999636654453100001210244588864215--87643455511210
Q gi|254780397|r 180 CRILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLRND--NKNIIGPLPADSMF 257 (343)
Q Consensus 180 ~~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~--g~~v~GP~paDt~F 257 (343)
.+.+|+..+.+-++...+.-++. +.++-++ .-.. .+-. .+...-+.++..++ ++.+ -..-.|.+.
T Consensus 154 ~~~~t~~~~~Ri~r~Afe~A~~~----~k~vt~v--~KaN----v~~~--~~~~~~~~~~va~~yp~i~~-~~~~vD~~~ 220 (345)
T d1g2ua_ 154 TERYSKPEVERVARVAFEVARKR----RKHVVSV--DKAN----VLEV--GEFWRKTVEEVGRGYPDVAL-EHQYVDAMA 220 (345)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHTT----TSEEEEE--ECTT----TCHH--HHHHHHHHHHHHTTCTTSEE-EEEEHHHHH
T ss_pred EEEECHHHHHHHHHHHHHHHHHC----CCCEEEC--CCCC----CCCC--CCHHHHHHHHHHHHCCCCEE-EHHHHHHHH
T ss_conf 07852999999999999999974----9954631--6777----4446--50345799999744897353-258988899
Q ss_pred ECCCC--CCCCEEEE--EEC----CHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 00223--66768999--851----20225555414477279992087647558875522213368668389999999999
Q gi|254780397|r 258 HHSAR--QCYDVAIC--MYH----DQALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAA 329 (343)
Q Consensus 258 ~~~~~--~~~D~vla--mYH----DQglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~ 329 (343)
..-.+ .+||++|+ ||= |.+.--.=.++.--+.|+.-+-+ ---|-||||.||||||+|||.+|+-|.-+-+
T Consensus 221 ~~lv~~P~~fdViv~~Nl~GDIlSDl~a~l~GglGl~~s~nig~~~a--~fEp~HGsApdiaGk~iaNP~a~Ils~ammL 298 (345)
T d1g2ua_ 221 MHLVRSPARFDVVVTGNIFGDILSDLASVLPGSLGLLPSASLGRGTP--VFEPVHGSAPDIAGKGIANPTAAILSAAMML 298 (345)
T ss_dssp HHHHHCGGGCSEEEECHHHHHHHHHHHHTTTSCGGGCEEEEEESSCC--EEEESSCCCGGGTTSSCCCCHHHHHHHHHHH
T ss_pred HHHHHCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 99974035656331528899999999998735765677611037742--0254445345536999639699999999999
Q ss_pred HH
Q ss_conf 99
Q gi|254780397|r 330 QL 331 (343)
Q Consensus 330 ~~ 331 (343)
+.
T Consensus 299 ~~ 300 (345)
T d1g2ua_ 299 EH 300 (345)
T ss_dssp HH
T ss_pred HH
T ss_conf 75
No 16
>d1v53a1 c.77.1.1 (A:1-356) 3-isopropylmalate dehydrogenase, IPMDH {Bacillus coagulans [TaxId: 1398]}
Probab=96.74 E-value=0.00048 Score=41.93 Aligned_cols=136 Identities=14% Similarity=0.167 Sum_probs=75.7
Q ss_pred HCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCCCCCCHHHEEC
Q ss_conf 01024567888989999985313456707999636654453100001210244588864215--8764345551121000
Q gi|254780397|r 182 ILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLRND--NKNIIGPLPADSMFHH 259 (343)
Q Consensus 182 ~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~--g~~v~GP~paDt~F~~ 259 (343)
.+|.+.+.+.++...+.-++ + +.|+-++- ..+ .+ . -.....-+.++..++ ++.++ ..-.|.+-.+
T Consensus 161 ~~t~~~~~ri~r~af~~A~~--r--~kkVt~v~-K~n-----v~-~-~~~~~~~~~~eva~eyp~I~~~-~~~vD~~~~~ 227 (356)
T d1v53a1 161 AYTREEIERIIEKAFQLAQI--R--RKKLASVD-KAN-----VL-E-SSRMWREIAEETAKKYPDVELS-HMLVDSTSMQ 227 (356)
T ss_dssp EEEHHHHHHHHHHHHHHHHH--T--TSEEEEEE-CTT-----TC-H-HHHHHHHHHHHHHTTCTTSEEE-EEEHHHHHHH
T ss_pred EEEEEEEEEHHHHHHHHHHH--C--CCEEEEEE-CCC-----CC-C-CCHHHHHHHHHHHHHCCCEEEE-EEEHHHHHHH
T ss_conf 02321430034577767874--5--98465775-254-----10-2-4505869999998368986999-9883667889
Q ss_pred C--CCCCCCEEEEE--ECC----HHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 2--23667689998--512----022555541447727999208764755887552221336866838999999999999
Q gi|254780397|r 260 S--ARQCYDVAICM--YHD----QALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQL 331 (343)
Q Consensus 260 ~--~~~~~D~vlam--YHD----Qglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~ 331 (343)
- .-.+||++++. |=| -+..-+=.++.--+.|+..-- +----|-||||.||||||+|||.+++-|.-+-++.
T Consensus 228 lv~~P~~fdViv~~Nl~GDIlSDl~a~l~GglGl~~s~ni~~d~-~a~fEp~HGsapdiaGk~~aNP~a~ils~ammL~~ 306 (356)
T d1v53a1 228 LIANPGQFDVIVTENMFGDILSDEASVITGSLGMLPSASLRSDR-FGMYEPVHGSAPDIAGQGKANPLGTVLSAALMLRY 306 (356)
T ss_dssp HHHCGGGCSEEEECHHHHHHHHHHHTTTTSCTTSCEEEEECSSS-CEEEEESSCCCGGGTTSSCCCCHHHHHHHHHHHHH
T ss_pred HHHCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf 87223446645326788888889998873676311120026873-14633788872344489965929999999999986
No 17
>d1a05a_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thiobacillus ferrooxidans [TaxId: 920]}
Probab=96.64 E-value=0.00062 Score=41.29 Aligned_cols=136 Identities=14% Similarity=0.223 Sum_probs=75.4
Q ss_pred HCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCCCHHHEECC
Q ss_conf 010245678889899999853134567079996366544531000012102445888642158764-3455511210002
Q gi|254780397|r 182 ILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLRNDNKNI-IGPLPADSMFHHS 260 (343)
Q Consensus 182 ~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~g~~v-~GP~paDt~F~~~ 260 (343)
.+|++.+.+..+...+..++ .++++-+. |-. ..+-. .....-+.++.-++--+| .-..-.|++-..-
T Consensus 161 ~~t~~~~~ri~~~Af~~a~~----r~k~vt~v----~K~--ni~~~--~~lf~~~~~eva~~yp~i~~~~~~vD~~~~~l 228 (357)
T d1a05a_ 161 VYDEDEIRRIAHVAFRAAQG----RRKQLCSV----DKA--NVLET--TRLWREVVTEVARDYPDVRLSHMYVDNAAMQL 228 (357)
T ss_dssp EEEHHHHHHHHHHHHHHHHT----TTSEEEEE----ECT--TTCHH--HHHHHHHHHHHGGGCTTSEEEEEEHHHHHHHH
T ss_pred EEEHHHHHHHHHHHHHHHHC----CCCEEEEE----ECC--CCCCH--HHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHH
T ss_conf 96289999999999988645----78648888----536--64113--68999999999865898278751799999998
Q ss_pred C--CCCCCEEEE--EECC----HHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 2--366768999--8512----022555541447727999208764755887552221336866838999999999999
Q gi|254780397|r 261 A--RQCYDVAIC--MYHD----QALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQL 331 (343)
Q Consensus 261 ~--~~~~D~vla--mYHD----Qglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~ 331 (343)
. -.+||++|+ ||=| .+-.-+=.++.--+.|+.-+. ----|-||||-||||||+|||.+|+-|.-+-++-
T Consensus 229 v~~P~~fdViv~~Nl~GDIlSDl~a~l~GglGl~ps~nig~~~--a~fE~~HGsapdiaGk~~aNP~a~ils~ammL~~ 305 (357)
T d1a05a_ 229 IRAPAQFDVLLTGNMFGDILSDEASQLTGSIGMLPSASLGEGR--AMYEPIHGSAPDIAGQDKANPLATILSVAMMLRH 305 (357)
T ss_dssp HHCGGGCSEEEECHHHHHHHHHHHHHTTSCGGGCEEEEECSSC--EEEEESSCCCGGGTTTTCSCCHHHHHHHHHHHHH
T ss_pred HHCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC--CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 7454565678511788887889998873576541030006873--0102456878000589865949999999999972
No 18
>d1lwda_ c.77.1.1 (A:) NADP-dependent isocitrate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=93.57 E-value=0.046 Score=30.05 Aligned_cols=73 Identities=14% Similarity=0.020 Sum_probs=49.3
Q ss_pred CCCCCEEEE--EE----CCHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCH------HHCCCCCCCHHHHHHHHHHHH
Q ss_conf 366768999--85----120225555414477279992087647558875522------213368668389999999999
Q gi|254780397|r 262 RQCYDVAIC--MY----HDQALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAF------DIAGSSLTQEESLVSALKIAA 329 (343)
Q Consensus 262 ~~~~D~vla--mY----HDQglip~K~l~f~~~Vn~t~GLp~irtSpdHGTaf------diagk~~a~~~s~~~ai~~a~ 329 (343)
..+||++++ || -|++-.-.-.+++--+.|+--.-.+.-.-|-||||- ||||||+|||.+|+-|.-+.+
T Consensus 261 ~p~~~Vivt~NlfGDIlSDlaa~l~GglGl~pSanig~~~~~~~fe~~HGsap~~ag~~~iagk~iANP~a~IlS~ammL 340 (413)
T d1lwda_ 261 SSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGL 340 (413)
T ss_dssp SCCCEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSSCEEEECCSCCCHHHHHHHHTTCCCCCCCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 98873999756340567667787438977776432478755433334656600000012117765659599999999999
Q ss_pred HHHHH
Q ss_conf 99985
Q gi|254780397|r 330 QLGYQ 334 (343)
Q Consensus 330 ~~~~~ 334 (343)
+..-.
T Consensus 341 ~~lg~ 345 (413)
T d1lwda_ 341 EHRGK 345 (413)
T ss_dssp HHHHH
T ss_pred HHHCC
T ss_conf 97345
No 19
>d1a05a_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thiobacillus ferrooxidans [TaxId: 920]}
Probab=83.83 E-value=0.24 Score=25.79 Aligned_cols=20 Identities=40% Similarity=0.732 Sum_probs=15.5
Q ss_pred CCCEEEECCCCCCCCHHHHHHH
Q ss_conf 8838997189877478999998
Q gi|254780397|r 4 FLPLILTQGDPAGIGPDISLKA 25 (343)
Q Consensus 4 ~~pI~IT~GDPaGIGpEIilKa 25 (343)
|++|++-.|| ||||||+--+
T Consensus 1 M~kI~vipGD--GIGpEV~~~~ 20 (357)
T d1a05a_ 1 MKKIAIFAGD--GIGPEIVAAA 20 (357)
T ss_dssp CCEEEEEEES--TTHHHHHHHH
T ss_pred CCEEEEECCC--CCHHHHHHHH
T ss_conf 9789997767--8669999999
No 20
>d1w0da_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=83.47 E-value=0.25 Score=25.65 Aligned_cols=20 Identities=40% Similarity=0.831 Sum_probs=15.4
Q ss_pred CCCEEEECCCCCCCCHHHHHHH
Q ss_conf 8838997189877478999998
Q gi|254780397|r 4 FLPLILTQGDPAGIGPDISLKA 25 (343)
Q Consensus 4 ~~pI~IT~GDPaGIGpEIilKa 25 (343)
|+||++-.|| ||||||+--+
T Consensus 1 M~kI~vlpGD--GIGpEV~~~a 20 (337)
T d1w0da_ 1 MSKLAIIAGD--GIGPEVTAEA 20 (337)
T ss_dssp CCEEEEEEES--TTHHHHHHHH
T ss_pred CCEEEEECCC--CCHHHHHHHH
T ss_conf 9789998988--6309999999
No 21
>d1cnza_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Salmonella typhimurium [TaxId: 90371]}
Probab=82.07 E-value=0.31 Score=25.12 Aligned_cols=23 Identities=35% Similarity=0.686 Sum_probs=18.6
Q ss_pred CCCCCCEEEECCCCCCCCHHHHHHH
Q ss_conf 9888838997189877478999998
Q gi|254780397|r 1 MDEFLPLILTQGDPAGIGPDISLKA 25 (343)
Q Consensus 1 M~k~~pI~IT~GDPaGIGpEIilKa 25 (343)
|++.-+|++-.|| ||||||+--+
T Consensus 1 M~~~~~I~vipGD--GIGpEV~~~a 23 (363)
T d1cnza_ 1 MSKNYHIAVLPGD--GIGPEVMAQA 23 (363)
T ss_dssp CCCCEEEEEEEES--TTHHHHHHHH
T ss_pred CCCCCEEEEECCC--CCHHHHHHHH
T ss_conf 9998669998988--8559999999
No 22
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]}
Probab=79.49 E-value=0.65 Score=23.15 Aligned_cols=16 Identities=44% Similarity=0.846 Sum_probs=7.8
Q ss_pred HHHHHHHHHCCCCCEE
Q ss_conf 8877664301234304
Q gi|254780397|r 103 IEKAVSLTLSGQALAI 118 (343)
Q Consensus 103 l~~A~~l~~~g~~~al 118 (343)
++.|++...++....+
T Consensus 105 ~~~a~~~i~~g~~~~i 120 (295)
T d2bona1 105 LDKALKLAIAGDAIAI 120 (295)
T ss_dssp HHHHHHHHHHSEEEEE
T ss_pred HHHHHHHHCCCCEEEE
T ss_conf 4666642035625985
No 23
>d2d13a1 c.26.2.1 (A:2-227) Hypothetical protein PH1257 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=77.30 E-value=2.1 Score=20.04 Aligned_cols=74 Identities=15% Similarity=0.091 Sum_probs=36.9
Q ss_pred HHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC------------CCCE---E
Q ss_conf 887766430123430443223447776410132564789999834235886652112332------------2112---6
Q gi|254780397|r 103 IEKAVSLTLSGQALAIVTNPIAKFLLYQEKFKFPGHTEFLAELAKKNTGITFKPVMMLSG------------PQLR---T 167 (343)
Q Consensus 103 l~~A~~l~~~g~~~alVT~PInK~~l~~aG~~f~GhTE~La~~~~~~~~~~~~~~Mll~~------------~~L~---V 167 (343)
++...++.++-.++++|+|-|-= ..|-+|..+.|..- +. .+...|++ .+++ |
T Consensus 78 ~~~l~~~l~~~~v~~vv~Gdi~~----------~~~r~r~e~~c~~~-gl--~~~~PLW~~d~~~ll~e~i~~G~~aii~ 144 (226)
T d2d13a1 78 VEDLKNVLEGLKVDGIVAGALAS----------RYQKERIENVAREL-GL--KVYTPAWEKDPYQYMLEIIKLGFKVVFV 144 (226)
T ss_dssp HHHHHHHHHTBCCSEEECCCSSC----------HHHHHHHHHHHHHH-TC--EEECTTTTCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCCCEEECCEEC----------HHHHHHHHHHHHHC-CC--EEEECCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 99999999860725367610003----------88899998668765-94--8982356889899999999879959999
Q ss_pred EEECCCCCHHHHHHHCCHHHHH
Q ss_conf 6530453133343201024567
Q gi|254780397|r 168 VPVTIHIPIADICRILSTKRII 189 (343)
Q Consensus 168 ~l~TtHiPLk~V~~~it~~~I~ 189 (343)
+..+..++=+-+-+.|+++.+.
T Consensus 145 ~v~~~gL~~~~lGr~id~~~~~ 166 (226)
T d2d13a1 145 AVSAYGLNESWLGRELNYKNLE 166 (226)
T ss_dssp EECSTTCCGGGTTCBCCHHHHH
T ss_pred EECCCCCCHHHCCCCCCHHHHH
T ss_conf 9724789978938685687899
No 24
>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=77.01 E-value=1.5 Score=20.90 Aligned_cols=99 Identities=15% Similarity=0.146 Sum_probs=44.9
Q ss_pred HHHHHHHHHCCCCCCCCCCCHHHEECCCCCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCEEEECC--CCCC-----
Q ss_conf 458886421587643455511210002236676899985120225555414477279992087647558--8755-----
Q gi|254780397|r 234 IPAITYLRNDNKNIIGPLPADSMFHHSARQCYDVAICMYHDQALIPIKTLDFNQTVNITLGLPFVRTSP--DHGT----- 306 (343)
Q Consensus 234 ~PaI~~~~~~g~~v~GP~paDt~F~~~~~~~~D~vlamYHDQglip~K~l~f~~~Vn~t~GLp~irtSp--dHGT----- 306 (343)
.-.-+.+++.|+.|..--.+..++.......||+|+.=++=.+.-.+..+..-+...- -.|++-.|. +..+
T Consensus 16 ~~l~~~L~~~g~~v~~a~~~~~al~~~~~~~~dliilD~~mp~~~G~~~~~~i~~~~~--~~~ii~lt~~~~~~~~~~a~ 93 (128)
T d1yioa2 16 EGLRNLLRSAGFEVETFDCASTFLEHRRPEQHGCLVLDMRMPGMSGIELQEQLTAISD--GIPIVFITAHGDIPMTVRAM 93 (128)
T ss_dssp HHHHHHHHTTTCEEEEESSHHHHHHHCCTTSCEEEEEESCCSSSCHHHHHHHHHHTTC--CCCEEEEESCTTSCCCHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHCCCCHHHHHHHHHHHHCC--CCEEEEEEEECCHHHHHHHH
T ss_conf 9999999986997111144999999987458887502343565225899999986389--97699999889899999999
Q ss_pred ---CHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf ---22213368668389999999999999852
Q gi|254780397|r 307 ---AFDIAGSSLTQEESLVSALKIAAQLGYQK 335 (343)
Q Consensus 307 ---afdiagk~~a~~~s~~~ai~~a~~~~~~~ 335 (343)
|+|.--|- .++..+.+++.-++++.+.|
T Consensus 94 ~~Ga~dyl~KP-~~~~~L~~~i~~~l~~~~~~ 124 (128)
T d1yioa2 94 KAGAIEFLPKP-FEEQALLDAIEQGLQLNAER 124 (128)
T ss_dssp HTTEEEEEESS-CCHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCEEEECC-CCHHHHHHHHHHHHHHHHHH
T ss_conf 87998899897-99999999999999999998
No 25
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]}
Probab=65.49 E-value=2.9 Score=19.26 Aligned_cols=13 Identities=23% Similarity=0.480 Sum_probs=5.1
Q ss_pred HHHHHHHHHCCCC
Q ss_conf 8877664301234
Q gi|254780397|r 103 IEKAVSLTLSGQA 115 (343)
Q Consensus 103 l~~A~~l~~~g~~ 115 (343)
++.|++...++..
T Consensus 108 ~~~al~~~~~~~~ 120 (312)
T d2qv7a1 108 IMGALDVIIEGHS 120 (312)
T ss_dssp HHHHHHHHHHTCE
T ss_pred HHHHHHHHHCCCC
T ss_conf 9999975513981
No 26
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=61.67 E-value=4.7 Score=17.98 Aligned_cols=104 Identities=18% Similarity=0.185 Sum_probs=55.7
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHEECCCCCCCCEEEE--EECCHHHHHHHHH
Q ss_conf 56707999636654453100001210244588864215876434555112100022366768999--8512022555541
Q gi|254780397|r 206 NNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLRNDNKNIIGPLPADSMFHHSARQCYDVAIC--MYHDQALIPIKTL 283 (343)
Q Consensus 206 ~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~g~~v~GP~paDt~F~~~~~~~~D~vla--mYHDQglip~K~l 283 (343)
.+-++.++| + |.++.+...-.+++.......+.|..+.+.+ ...+...|++|. .|..++...+-++
T Consensus 65 ~~~~l~i~G------~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~di~v~ps~~e~~~~~~~Eam 132 (196)
T d2bfwa1 65 QEMRFIIIG------K----GDPELEGWARSLEEKHGNVKVITEMLSREFV--RELYGSVDFVIIPSYFEPFGLVALEAM 132 (196)
T ss_dssp GGEEEEEEC------C----BCHHHHHHHHHHHHHCTTEEEECSCCCHHHH--HHHHTTCSEEEECCSCCSSCHHHHHHH
T ss_pred CCEEEEEEE------E----CCCCHHHHHHHHHHCCCEEEEEEECCCCCCC--HHCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 881899996------1----3552134543322113115775302332110--000123233443222112332201333
Q ss_pred CCCCEEEEEEECCEEEECCCCCCCHHHCCCC------CCCHHHHHHHHHHHHHH
Q ss_conf 4477279992087647558875522213368------66838999999999999
Q gi|254780397|r 284 DFNQTVNITLGLPFVRTSPDHGTAFDIAGSS------LTQEESLVSALKIAAQL 331 (343)
Q Consensus 284 ~f~~~Vn~t~GLp~irtSpdHGTafdiagk~------~a~~~s~~~ai~~a~~~ 331 (343)
.. |+|+|-+ ++|..-|+...+ --|+.++.++|.-++.+
T Consensus 133 ~~--------G~pvI~~--~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~ 176 (196)
T d2bfwa1 133 CL--------GAIPIAS--AVGGLRDIITNETGILVKAGDPGELANAILKALEL 176 (196)
T ss_dssp HT--------TCEEEEE--SCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHC
T ss_pred HC--------CCEEEEC--CCCCCCEEECCCCEEEECCCCHHHHHHHHHHHHHC
T ss_conf 14--------8604651--78853201028731467899999999999999957
No 27
>d1i2ha_ b.55.1.4 (A:) Homer {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=53.20 E-value=6.3 Score=17.22 Aligned_cols=69 Identities=14% Similarity=0.225 Sum_probs=50.5
Q ss_pred EEEEEECCHHHHHHHHHCCCC---EEEEEE--ECCEEEECC--------CCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 899985120225555414477---279992--087647558--------8755222133686683899999999999998
Q gi|254780397|r 267 VAICMYHDQALIPIKTLDFNQ---TVNITL--GLPFVRTSP--------DHGTAFDIAGSSLTQEESLVSALKIAAQLGY 333 (343)
Q Consensus 267 ~vlamYHDQglip~K~l~f~~---~Vn~t~--GLp~irtSp--------dHGTafdiagk~~a~~~s~~~ai~~a~~~~~ 333 (343)
.-|.+|||++---+...+-.. -+|.++ ||.|-++|| .|.|-|.+-=...+|...|.+++.-|.+-.+
T Consensus 34 s~V~i~~~~~~~~yRIvg~~d~~vvin~~i~~~l~y~kas~~FhqWrd~r~~~V~GL~F~s~~da~~F~~~~~~ale~~~ 113 (145)
T d1i2ha_ 34 VTVSYFYDSTRNVYRIISLDGSKAIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFKEAAR 113 (145)
T ss_dssp EEEEEEEETTTTEEEEEEEETTEEEEEEECCTTCCEEEEETTEEEEEETTTTEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCEEEEEEECCCEEEEEEECCCCCEEEECCCCEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 67999974898568889845985899863268851442256402711055551561155998999999999999999764
Q ss_pred HH
Q ss_conf 52
Q gi|254780397|r 334 QK 335 (343)
Q Consensus 334 ~~ 335 (343)
..
T Consensus 114 ~~ 115 (145)
T d1i2ha_ 114 LA 115 (145)
T ss_dssp HH
T ss_pred CC
T ss_conf 13
No 28
>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}
Probab=46.94 E-value=4.4 Score=18.15 Aligned_cols=51 Identities=22% Similarity=0.307 Sum_probs=32.6
Q ss_pred CCCCCCEEEECCCCCCCCHHHHHHHHCCCCHHCCCCEEEECCHH---HHHHHHHHCCCC
Q ss_conf 98888389971898774789999984285232489899993999---999999981899
Q gi|254780397|r 1 MDEFLPLILTQGDPAGIGPDISLKAWASRQITAIPPFIYIGDVD---VLNARAKQLNLS 56 (343)
Q Consensus 1 M~k~~pI~IT~GDPaGIGpEIilKal~~~~~~~~~~~viigd~~---~l~~~~k~l~~~ 56 (343)
|+++.+++| .| ..+||.|..++.+... ....++.+.|.+ .-..+++..+..
T Consensus 1 M~kkirvaI-IG-aG~ig~~~~~~~l~~~---~~~el~avas~~~~~~~~~~a~~~~i~ 54 (157)
T d1nvmb1 1 MNQKLKVAI-IG-SGNIGTDLMIKVLRNA---KYLEMGAMVGIDAASDGLARAQRMGVT 54 (157)
T ss_dssp CCSCEEEEE-EC-CSHHHHHHHHHHHHHC---SSEEEEEEECSCTTCHHHHHHHHTTCC
T ss_pred CCCCCEEEE-EC-CCHHHHHHHHHHHHHC---CCCEEEEEEECCHHCCCHHHHHHCCCC
T ss_conf 998767999-86-8599999999999619---865599998553320310356653974
No 29
>d1dpta_ d.80.1.3 (A:) D-dopachrome tautomerase {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.96 E-value=9.9 Score=16.05 Aligned_cols=78 Identities=18% Similarity=0.132 Sum_probs=53.4
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCC-----HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 647899998342358866521123322112665304531-----333432010245678889899999853134567079
Q gi|254780397|r 137 GHTEFLAELAKKNTGITFKPVMMLSGPQLRTVPVTIHIP-----IADICRILSTKRIIETSDTVYNAMKKYFGINNPRIA 211 (343)
Q Consensus 137 GhTE~La~~~~~~~~~~~~~~Mll~~~~L~V~l~TtHiP-----Lk~V~~~it~~~I~~ki~~~~~~l~~~~gi~~PkIa 211 (343)
.-++.+|+..++. ++.+|....++-+..+..++-| |+.+-...+.+.-.+-...+.+.+.+.+||+.=||-
T Consensus 21 ~~s~~ia~~lgKp----e~~vmV~v~~~~~m~fgGs~eP~a~~~l~sig~~~~~e~n~~~s~~i~~~l~~~LgI~~~Riy 96 (117)
T d1dpta_ 21 RLCAAAASILGKP----ADRVNVTVRPGLAMALSGSTEPCAQLSISSIGVVGTAEDNRSHSAHFFEFLTKELALGQDRIL 96 (117)
T ss_dssp HHHHHHHHHHCSC----GGGCEEEEECSCCCCBTTBCSSCEEEEEEEESSSCSHHHHHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHHHHCCC----HHHEEEEEECCCCEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 9999999887999----799999997597569779899679999998258786778899999999999987297967599
Q ss_pred EEE--ECCC
Q ss_conf 996--3665
Q gi|254780397|r 212 ISG--LNPH 218 (343)
Q Consensus 212 V~g--LNPH 218 (343)
|.= ++||
T Consensus 97 I~f~~~~~~ 105 (117)
T d1dpta_ 97 IRFFPLESW 105 (117)
T ss_dssp EEEEEECGG
T ss_pred EEEEECCHH
T ss_conf 999978899
No 30
>d1jf8a_ c.44.1.1 (A:) Arsenate reductase ArsC {Staphylococcus aureus [TaxId: 1280]}
Probab=41.14 E-value=10 Score=15.97 Aligned_cols=55 Identities=13% Similarity=0.186 Sum_probs=34.8
Q ss_pred CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHEECCCCCCCCEEEEEECCH
Q ss_conf 670799963665445310000121024458886421587643455511210002236676899985120
Q gi|254780397|r 207 NPRIAISGLNPHAGENATIGIEEKNIIIPAITYLRNDNKNIIGPLPADSMFHHSARQCYDVAICMYHDQ 275 (343)
Q Consensus 207 ~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~g~~v~GP~paDt~F~~~~~~~~D~vlamYHDQ 275 (343)
+-.+-=+|+.|+.. + .-|++.+++.|+++.+=.| ..+......++|.|++|.=++
T Consensus 30 ~~~v~SAG~~~~~v------~------p~ai~~l~e~Gid~~~~~~--k~~~~~~~~~~DlIi~m~~~~ 84 (130)
T d1jf8a_ 30 GWNVYSAGIETHGV------N------PKAIEAMKEVDIDISNHTS--DLIDNDILKQSDLVVTLCSDA 84 (130)
T ss_dssp TEEEEEEESSCCCC------C------HHHHHHHHHTTCCCTTCCC--CBCCHHHHHHCSEEEECSHHH
T ss_pred CCEECCCCCCCCCC------C------HHHHHHHHCCCCCCCCCCC--CHHHHHHCCCCCEEEECCHHH
T ss_conf 60550434223454------0------2556775301322235664--011054432268854058768
No 31
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=37.22 E-value=7.1 Score=16.89 Aligned_cols=24 Identities=17% Similarity=0.202 Sum_probs=13.8
Q ss_pred CCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 8764755887552221336866838999999999
Q gi|254780397|r 295 LPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIA 328 (343)
Q Consensus 295 Lp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a 328 (343)
.|++.+|-=+|... .-+++.+...
T Consensus 192 ~~i~pvSa~~G~gi----------d~Ll~~l~~l 215 (227)
T d1g7sa4 192 VSIIPISAITGEGI----------PELLTMLMGL 215 (227)
T ss_dssp EEEEECCTTTCTTH----------HHHHHHHHHH
T ss_pred CEEEEEECCCCCCH----------HHHHHHHHHH
T ss_conf 74999348989899----------9999999999
No 32
>d1uiza_ d.80.1.3 (A:) Microphage migration inhibition factor (MIF) {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=30.41 E-value=15 Score=14.92 Aligned_cols=73 Identities=15% Similarity=0.086 Sum_probs=53.9
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCC-----HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 647899998342358866521123322112665304531-----333432010245678889899999853134567079
Q gi|254780397|r 137 GHTEFLAELAKKNTGITFKPVMMLSGPQLRTVPVTIHIP-----IADICRILSTKRIIETSDTVYNAMKKYFGINNPRIA 211 (343)
Q Consensus 137 GhTE~La~~~~~~~~~~~~~~Mll~~~~L~V~l~TtHiP-----Lk~V~~~it~~~I~~ki~~~~~~l~~~~gi~~PkIa 211 (343)
.-++.+++..++. ++.+|+...++.+..+.-++-| |+.+ ..++.+.-.+-...+.+.+.+.+||+.=||-
T Consensus 22 ~ls~~ia~~lgKp----e~~vmv~v~~~~~m~fggs~~P~a~~~v~si-G~l~~~~n~~~s~~i~~~l~~~LgI~~~Riy 96 (115)
T d1uiza_ 22 DLTKQLAKATGKP----AEYIAIHIVPDQIMSFGDSTDPCAVCSLCSI-GKIGGPQNKSYTKLLCDILTKQLNIPANRVY 96 (115)
T ss_dssp HHHHHHHHHHTCC----GGGCEEEEECSCEEEETTBCSSCEEEEEEES-SCCSHHHHHHHHHHHHHHHHHHHCCCGGGEE
T ss_pred HHHHHHHHHHCCC----HHHEEEEECCCCEEEECCCCCCEEEEEEEEE-CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 9999999987999----7999999838960796798996899999997-6888135599999999999987499956499
Q ss_pred EEE
Q ss_conf 996
Q gi|254780397|r 212 ISG 214 (343)
Q Consensus 212 V~g 214 (343)
+.=
T Consensus 97 i~f 99 (115)
T d1uiza_ 97 INY 99 (115)
T ss_dssp EEE
T ss_pred EEE
T ss_conf 999
No 33
>d2ha9a1 c.7.1.5 (A:1-440) Uncharacterized protein SP0239 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=29.73 E-value=16 Score=14.85 Aligned_cols=45 Identities=13% Similarity=0.157 Sum_probs=27.3
Q ss_pred CCHHHHHHHCCH--HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
Q ss_conf 313334320102--4567888989999985313456707999636654
Q gi|254780397|r 174 IPIADICRILST--KRIIETSDTVYNAMKKYFGINNPRIAISGLNPHA 219 (343)
Q Consensus 174 iPLk~V~~~it~--~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHA 219 (343)
.++.++++.|.+ -+|.+.-+++-+..-+.+|++. -+-=+.|.|+-
T Consensus 229 ~~~~~lae~ik~~afkitR~gelVg~~~a~~lgv~f-ggiDlSLAPsP 275 (440)
T d2ha9a1 229 QSFDVVAETVKKTAFKITRIGQLVGQMASERLGVEF-GIVDLSLAPTP 275 (440)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSEE-EEECCCCCCC-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE-EEEECCCCCCC
T ss_conf 888999999999999999999999999999709976-78856878998
No 34
>d1c41a_ c.16.1.1 (A:) Lumazine synthase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Probab=24.94 E-value=10 Score=15.91 Aligned_cols=152 Identities=18% Similarity=0.182 Sum_probs=77.1
Q ss_pred CCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 22112665304531333432010245678889899999853134567079996366544531000012102445888642
Q gi|254780397|r 162 GPQLRTVPVTIHIPIADICRILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLR 241 (343)
Q Consensus 162 ~~~L~V~l~TtHiPLk~V~~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~ 241 (343)
+.++|++.+. ..-+++....-+.-..+.|+. .|++...|-|.-. | |.=| |-=+++.+-
T Consensus 9 ~s~lrI~IV~---------s~~n~~I~d~Ll~ga~~~L~~-~Gv~~~~i~v~~V-P--------Ga~E---lP~a~~~l~ 66 (195)
T d1c41a_ 9 GSALRIGIVH---------ARWNETIIEPLLAGTKAKLLA-CGVKESNIVVQSV-P--------GSWE---LPIAVQRLY 66 (195)
T ss_dssp CSSCCEEEEE---------ECTTHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEE-S--------STTH---HHHHHHHHH
T ss_pred CCCCEEEEEE---------CCCCHHHHHHHHHHHHHHHHH-CCCCCCCCEEEEC-C--------CHHH---HHHHHHHHH
T ss_conf 7899899997---------108789999999999999998-5998356859988-8--------5988---999999998
Q ss_pred HC-------------CCCCCCCCCCHHHE----ECCCCCCCCEEEEE--------ECCHHH-----HHHHHHCCCCEEEE
Q ss_conf 15-------------87643455511210----00223667689998--------512022-----55554144772799
Q gi|254780397|r 242 ND-------------NKNIIGPLPADSMF----HHSARQCYDVAICM--------YHDQAL-----IPIKTLDFNQTVNI 291 (343)
Q Consensus 242 ~~-------------g~~v~GP~paDt~F----~~~~~~~~D~vlam--------YHDQgl-----ip~K~l~f~~~Vn~ 291 (343)
.. -.+.-|--+.|-.- ..+..++||+++|. +|.+-. -.+--+..+.++-|
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~yDaiIaLG~VIkGeT~Hfe~I~~~v~~gL~~lsl~~~~PI 146 (195)
T d1c41a_ 67 SASQLQTPSSGPSLSAGDLLGSSTTDLTALPTTTASSTGPFDALIAIGVLIKGETMHFEYIADSVSHGLMRVQLDTGVPV 146 (195)
T ss_dssp HHHHHC------------------------------CCSCCSEEEEEEEEECCSSTHHHHHHHHHHHHHHHHHHHHTSCE
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 62011101121111111112344321100012455531786679998789845853888999999999999873169856
Q ss_pred EEECCEEEECCCCCCCHHHCCC--CCCCHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 9208764755887552221336--866838999999999999985200101
Q gi|254780397|r 292 TLGLPFVRTSPDHGTAFDIAGS--SLTQEESLVSALKIAAQLGYQKNLCND 340 (343)
Q Consensus 292 t~GLp~irtSpdHGTafdiagk--~~a~~~s~~~ai~~a~~~~~~~~~~~~ 340 (343)
..| |-|..+.--|.+.+|- +.-|- =.+|-.-|++|+.-|+....
T Consensus 147 i~G---ILTv~n~eQA~~Ra~~~~~~~NK--G~EAA~Aal~M~~l~r~l~~ 192 (195)
T d1c41a_ 147 IFG---VLTVLTDDQAKARAGVIEGSHNH--GEDWGLAAVEMGVRRRDWAA 192 (195)
T ss_dssp EEE---EEEESSHHHHHHHTTCSTTCCCH--HHHHHHHHHHHHHHHHHHHT
T ss_pred EEE---ECCCCCHHHHHHHCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHC
T ss_conf 998---53779989999872777788756--89999999999999998743
No 35
>d1hfoa_ d.80.1.3 (A:) Microphage migration inhibition factor (MIF) {Trichinella spiralis [TaxId: 6334]}
Probab=24.42 E-value=19 Score=14.27 Aligned_cols=73 Identities=14% Similarity=0.141 Sum_probs=53.2
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCC-----HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 47899998342358866521123322112665304531-----3334320102456788898999998531345670799
Q gi|254780397|r 138 HTEFLAELAKKNTGITFKPVMMLSGPQLRTVPVTIHIP-----IADICRILSTKRIIETSDTVYNAMKKYFGINNPRIAI 212 (343)
Q Consensus 138 hTE~La~~~~~~~~~~~~~~Mll~~~~L~V~l~TtHiP-----Lk~V~~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV 212 (343)
-+..+++..++. ++.+|+...++.+..+.-++-| |+.+- .++.+.-.+-...+.+.+.+.+||+.=||-|
T Consensus 22 ~s~~la~~lgKp----e~~vmV~v~~~~~m~fgGs~eP~a~~~l~sig-~l~~~~n~~~s~~i~~~l~~~LgI~~~RiyI 96 (113)
T d1hfoa_ 22 TSALVGNILSKP----GSYVAVHINTDQQLSFGGSTNPAAFGTLMSIG-GIEPSRNRDHSAKLFDHLNTKLGIPKNRMYI 96 (113)
T ss_dssp HHHHHHHHHTCC----GGGCEEEEECSCEEEETTBCSSCEEEEEEESS-SCSHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred HHHHHHHHHCCC----HHHEEEEECCCCCEEECCCCCCEEEEEEEEEC-CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 999999987999----79989998189727976989967999999935-8996883899999999999971979364999
Q ss_pred EEE
Q ss_conf 963
Q gi|254780397|r 213 SGL 215 (343)
Q Consensus 213 ~gL 215 (343)
.=-
T Consensus 97 ~f~ 99 (113)
T d1hfoa_ 97 HFV 99 (113)
T ss_dssp EEE
T ss_pred EEE
T ss_conf 999
No 36
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=23.04 E-value=21 Score=14.11 Aligned_cols=12 Identities=17% Similarity=0.495 Sum_probs=8.0
Q ss_pred CCCCEEEECCHH
Q ss_conf 489899993999
Q gi|254780397|r 33 AIPPFIYIGDVD 44 (343)
Q Consensus 33 ~~~~~viigd~~ 44 (343)
..+.++++|+..
T Consensus 25 ~~P~ivvvG~~S 36 (299)
T d2akab1 25 DLPQIAVVGGQS 36 (299)
T ss_dssp CCCEEEEEEBTT
T ss_pred CCCEEEEECCCC
T ss_conf 888699976898
No 37
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}
Probab=21.07 E-value=23 Score=13.87 Aligned_cols=81 Identities=15% Similarity=0.103 Sum_probs=42.0
Q ss_pred CCCCCCCCCHHHEECCCCCCCCEEE--EEECCHHHHHHHHHCCCCEEEEEEECCEEEECC--------CCCCC--HHHCC
Q ss_conf 7643455511210002236676899--985120225555414477279992087647558--------87552--22133
Q gi|254780397|r 245 KNIIGPLPADSMFHHSARQCYDVAI--CMYHDQALIPIKTLDFNQTVNITLGLPFVRTSP--------DHGTA--FDIAG 312 (343)
Q Consensus 245 ~~v~GP~paDt~F~~~~~~~~D~vl--amYHDQglip~K~l~f~~~Vn~t~GLp~irtSp--------dHGTa--fdiag 312 (343)
+.+.|.++-+-. ...+..-|++| +.|==+|+.++.++.. |+|+|-|.. |+.+. ..-.+
T Consensus 348 v~~~~~~~~~~~--~~~~~~aD~~v~PS~~E~fglv~lEAma~--------G~PvVas~~GG~~E~v~d~~~~~~~~~~~ 417 (477)
T d1rzua_ 348 VGVAIGYNEPLS--HLMQAGCDAIIIPSRFEPCGLTQLYALRY--------GCIPVVARTGGLADTVIDANHAALASKAA 417 (477)
T ss_dssp EEEEESCCHHHH--HHHHHHCSEEEECCSCCSSCSHHHHHHHH--------TCEEEEESSHHHHHHCCBCCHHHHHTTCC
T ss_pred EEEECCCCHHHH--HHHHHHCCCCCCCCCCCCCCHHHHHHHHC--------CCCEEECCCCCCCCEEECCCCCCCCCCCC
T ss_conf 789715470579--99998385134886535788899999983--------99899907999740552487553346787
Q ss_pred CC----CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 68----668389999999999999852
Q gi|254780397|r 313 SS----LTQEESLVSALKIAAQLGYQK 335 (343)
Q Consensus 313 k~----~a~~~s~~~ai~~a~~~~~~~ 335 (343)
.| -.|+.+|.+||..++++..++
T Consensus 418 ~G~l~~~~d~~~la~ai~~~l~~~~~~ 444 (477)
T d1rzua_ 418 TGVQFSPVTLDGLKQAIRRTVRYYHDP 444 (477)
T ss_dssp CBEEESSCSHHHHHHHHHHHHHHHTCH
T ss_pred CEEEECCCCHHHHHHHHHHHHHHHCCH
T ss_conf 448969999999999999998600799
Done!