PSIBLAST alignment of GI: 254780397 and protein with PDB id: 1r8k

>gi|39654841|pdb|1R8K|A Chain A, Pdxa Protein; Nad-Dependent DehydrogenaseCARBOXYLASE; Subunit Of Pyridoxine Phosphate Biosynthetic Protein Pdxj- Pdxa [salmonella Typhimurium] Length = 329
>gi|39654842|pdb|1R8K|B Chain B, Pdxa Protein; Nad-Dependent DehydrogenaseCARBOXYLASE; Subunit Of Pyridoxine Phosphate Biosynthetic Protein Pdxj- Pdxa [salmonella Typhimurium] Length = 329
 Score =  195 bits (495), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 106/335 (31%), Positives = 161/335 (48%), Gaps = 9/335 (2%)

Query: 1   MDEFLPLILTQGDPAGIGPDISLKAWASRQITAIPPFIYIGDVDVLNARAKQLNLSVPLY 60
           M     +++T G+PAG GPD+ ++  A R        +   D  +L  RA  L L + L 
Sbjct: 1   MSSAQRVVITPGEPAGSGPDLVVQ-LAQRAWP--IELVVCADGALLTERAAXLGLPLSLL 57

Query: 61  ETDCK-NAVSIFKKALPIISSPCGAKIVTGTPNPQTASSTIANIEKAVSLTLSGQALAIV 119
                  A       L ++     A  ++G    +     +  + +A    L+G+  A++
Sbjct: 58  PYSPDVPAAPQPAGTLTLLPVSLRAPAISGQLTVENGPYVVETLARACDGCLNGEFAALI 117

Query: 120 TNPIAKFLLYQEKFKFPGHTEFLAELAKKNTGITFKPVMMLSGPQLRTVPVTIHIPIADI 179
           T P+ K ++      F GHTEF  E ++       K V  L+  +LR    T H+P+  I
Sbjct: 118 TGPVHKGVINDAGISFTGHTEFFEERSQA-----KKVVXXLATEELRVALATTHLPLRAI 172

Query: 180 CRILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITY 239
              ++   + E    +++ ++  FGI  PRI + GLNPHAGE    G EE + IIP +  
Sbjct: 173 ADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHXGTEEIDTIIPVLDE 232

Query: 240 LRNDNKNIIGPLPADSMFHHSARQCYDVAICMYHDQALIPIKTLDFNQTVNITLGLPFVR 299
           LR     + GPLPAD++F        D  +  YHDQ L  +K   F + VNITLGLPF+R
Sbjct: 233 LRAQGXKLNGPLPADTLFQPKYLDNADAVLAXYHDQGLPVLKYQGFGRGVNITLGLPFIR 292

Query: 300 TSPDHGTAFDIAGSSLTQEESLVSALKIAAQLGYQ 334
           TS DHGTA ++AG       S ++AL +A +    
Sbjct: 293 TSVDHGTALELAGRGKADVGSFITALNLAIKXIVN 327