PSIBLAST alignment of GI: 254780397 and protein with PDB id: 1r8k
>gi|39654841|pdb|1R8K|A Chain A, Pdxa Protein; Nad-Dependent DehydrogenaseCARBOXYLASE; Subunit Of Pyridoxine Phosphate Biosynthetic Protein Pdxj- Pdxa [salmonella Typhimurium] Length = 329
>gi|39654842|pdb|1R8K|B Chain B, Pdxa Protein; Nad-Dependent DehydrogenaseCARBOXYLASE; Subunit Of Pyridoxine Phosphate Biosynthetic Protein Pdxj- Pdxa [salmonella Typhimurium] Length = 329
Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats.
Identities = 106/335 (31%), Positives = 161/335 (48%), Gaps = 9/335 (2%)
Query: 1 MDEFLPLILTQGDPAGIGPDISLKAWASRQITAIPPFIYIGDVDVLNARAKQLNLSVPLY 60
M +++T G+PAG GPD+ ++ A R + D +L RA L L + L
Sbjct: 1 MSSAQRVVITPGEPAGSGPDLVVQ-LAQRAWP--IELVVCADGALLTERAAXLGLPLSLL 57
Query: 61 ETDCK-NAVSIFKKALPIISSPCGAKIVTGTPNPQTASSTIANIEKAVSLTLSGQALAIV 119
A L ++ A ++G + + + +A L+G+ A++
Sbjct: 58 PYSPDVPAAPQPAGTLTLLPVSLRAPAISGQLTVENGPYVVETLARACDGCLNGEFAALI 117
Query: 120 TNPIAKFLLYQEKFKFPGHTEFLAELAKKNTGITFKPVMMLSGPQLRTVPVTIHIPIADI 179
T P+ K ++ F GHTEF E ++ K V L+ +LR T H+P+ I
Sbjct: 118 TGPVHKGVINDAGISFTGHTEFFEERSQA-----KKVVXXLATEELRVALATTHLPLRAI 172
Query: 180 CRILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITY 239
++ + E +++ ++ FGI PRI + GLNPHAGE G EE + IIP +
Sbjct: 173 ADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHXGTEEIDTIIPVLDE 232
Query: 240 LRNDNKNIIGPLPADSMFHHSARQCYDVAICMYHDQALIPIKTLDFNQTVNITLGLPFVR 299
LR + GPLPAD++F D + YHDQ L +K F + VNITLGLPF+R
Sbjct: 233 LRAQGXKLNGPLPADTLFQPKYLDNADAVLAXYHDQGLPVLKYQGFGRGVNITLGLPFIR 292
Query: 300 TSPDHGTAFDIAGSSLTQEESLVSALKIAAQLGYQ 334
TS DHGTA ++AG S ++AL +A +
Sbjct: 293 TSVDHGTALELAGRGKADVGSFITALNLAIKXIVN 327