HHsearch alignment for GI: 254780398 and conserved domain: COG0742

Probab=97.35  E-value=0.001  Score=43.37  Aligned_cols=94  Identities=22%  Similarity=0.373  Sum_probs=72.3

Q ss_pred             HHHHHHHHHCCC--CCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH--CCCCCCHHHHCCCCH
Q ss_conf             999999997198--9998799975898823467750235259984255430368878753220--012200000001431
Q gi|254780398|r   34 NILKKIAESSGS--LDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP--NRLEIIQDDALKVDF  109 (284)
Q Consensus        34 ~i~~~iv~~~~~--~~~~~VlEIGpG~G~LT~~Ll~~~~~~v~aiEiD~~~~~~l~~~~~~~~--~~~~ii~~Dal~~d~  109 (284)
T Consensus        28 rVREalFNil~~~~i~g~~~LDlFAGSGaLGlEAlSRGA~~~~~vE~~~~a~~~l~~N~~~l~~~~~~~~~~~da~~~-L  106 (187)
T COG0742          28 RVREALFNILAPDEIEGARVLDLFAGSGALGLEALSRGAARVVFVEKDRKAVKILKENLKALGLEGEARVLRNDALRA-L  106 (187)
T ss_pred             HHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECHHHH-H
T ss_conf             888999987343445798899946876476899985788569999659899999999999848761259984008999-8


Q ss_pred             HHHCCCCCCEEEEECCCHH
Q ss_conf             5521332220112023224
Q gi|254780398|r  110 EKFFNISSPIRIIANLPYN  128 (284)
Q Consensus       110 ~~~~~~~~~~~vvgNLPYn  128 (284)
T Consensus       107 ~~~~~~~~FDlVflDPPy~  125 (187)
T COG0742         107 KQLGTREPFDLVFLDPPYA  125 (187)
T ss_pred             HHCCCCCCCCEEEECCCCC
T ss_conf             7227788512899689975