HHsearch alignment for GI: 254780398 and conserved domain: COG2519

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis].
Probab=98.41  E-value=8e-07  Score=62.74  Aligned_cols=79  Identities=24%  Similarity=0.259  Sum_probs=63.5

Q ss_pred             HHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHH-CCC-CEEEEECCCCCCHHHHHHHHHHH--HCCCCCCHHHHCCCC
Q ss_conf             89999999971989998799975898823467750-235-25998425543036887875322--001220000000143
Q gi|254780398|r   33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLT-LGA-RKVIVIEKDQQFFPILKDISSQH--PNRLEIIQDDALKVD  108 (284)
Q Consensus        33 ~~i~~~iv~~~~~~~~~~VlEIGpG~G~LT~~Ll~-~~~-~~v~aiEiD~~~~~~l~~~~~~~--~~~~~ii~~Dal~~d  108 (284)
T Consensus        80 PKD~~~I~~~~gi~pg~rVlEAGtGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~  159 (256)
T COG2519          80 PKDAGYIVARLGISPGSRVLEAGTGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGI  159 (256)
T ss_pred             CCCHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
T ss_conf             77799999870999887899815680599999999648884599999527899999999998424561378705400024


Q ss_pred             HHH
Q ss_conf             155
Q gi|254780398|r  109 FEK  111 (284)
Q Consensus       109 ~~~  111 (284)
T Consensus       160 ~~~  162 (256)
T COG2519         160 DEE  162 (256)
T ss_pred             CCC
T ss_conf             655