HHsearch alignment for GI: 254780398 and conserved domain: COG2520

Probab=97.41  E-value=0.00038  Score=46.09  Aligned_cols=85  Identities=31%  Similarity=0.354  Sum_probs=67.3

Q ss_pred             HHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH--HCCCCCCHHHHCCCCHHHHCCC
Q ss_conf             99997198999879997589882346775023525998425543036887875322--0012200000001431552133
Q gi|254780398|r   38 KIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH--PNRLEIIQDDALKVDFEKFFNI  115 (284)
Q Consensus        38 ~iv~~~~~~~~~~VlEIGpG~G~LT~~Ll~~~~~~v~aiEiD~~~~~~l~~~~~~~--~~~~~ii~~Dal~~d~~~~~~~  115 (284)
T Consensus       181 Rva~~v~--~GE~V~DmFAGVGpfsi~~Ak~g~~~V~A~diNP~A~~~L~eNi~LN~v~~~v~~i~gD~rev~~~~----  254 (341)
T COG2520         181 RVAELVK--EGETVLDMFAGVGPFSIPIAKKGRPKVYAIDINPDAVEYLKENIRLNKVEGRVEPILGDAREVAPEL----  254 (341)
T ss_pred             HHHHHHC--CCCEEEECCCCCCCCHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCC----
T ss_conf             9986306--9988998357865401246654786399994598999999999985576551567966488850204----


Q ss_pred             CCCEEEEECCCHH
Q ss_conf             2220112023224
Q gi|254780398|r  116 SSPIRIIANLPYN  128 (284)
Q Consensus       116 ~~~~~vvgNLPYn  128 (284)
T Consensus       255 ~~aDrIim~~p~~  267 (341)
T COG2520         255 GVADRIIMGLPKS  267 (341)
T ss_pred             CCCCEEEECCCCC
T ss_conf             6678898389872