HHsearch alignment for GI: 254780398 and conserved domain: KOG3924

Probab=93.59  E-value=0.15  Score=30.03  Aligned_cols=110  Identities=16%  Similarity=0.262  Sum_probs=77.4

Q ss_pred             CCCCCCCCCCCC---------CCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHC-CCCEEEEECCCCCCHHHHH-
Q ss_conf             984336584112---------39899999999719899987999758988234677502-3525998425543036887-
Q gi|254780398|r   19 IIPKKYMGQNFL---------LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL-GARKVIVIEKDQQFFPILK-   87 (284)
Q Consensus        19 ~~p~k~lGQnFL---------~d~~i~~~iv~~~~~~~~~~VlEIGpG~G~LT~~Ll~~-~~~~v~aiEiD~~~~~~l~-   87 (284)
T Consensus       155 ipd~~~L~~hYk~~ss~~YGE~~~~ql~si~dEl~~g~~D~F~DLGSGVGqlv~~~aa~a~~k~svG~eim~~pS~~a~~  234 (419)
T KOG3924         155 IPDPAILNQHYKSFSSETYGETQLEQLRSIVDELKLGPADVFMDLGSGVGQLVCFVAAYAGCKKSVGFEIMDKPSQCAEL  234 (419)
T ss_pred             CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHH
T ss_conf             69978998752355663055533999999999963698872347776510236788875340010340541584788999


Q ss_pred             ---------HHHHHHHCCCCCCHHHHCCCCHHHHCCCCCCEEEEECCCHH
Q ss_conf             ---------87532200122000000014315521332220112023224
Q gi|254780398|r   88 ---------DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN  128 (284)
Q Consensus        88 ---------~~~~~~~~~~~ii~~Dal~~d~~~~~~~~~~~~vvgNLPYn  128 (284)
T Consensus       235 ~~~~~kk~~k~fGk~~~~~~~i~gsf~~~~~v~eI~~eatvi~vNN~~Fd  284 (419)
T KOG3924         235 NKEEFKKLMKHFGKKPNKIETIHGSFLDPKRVTEIQTEATVIFVNNVAFD  284 (419)
T ss_pred             HHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCEEEEEECCCCC
T ss_conf             99999999998477867214036354788889988630528887033479