HHsearch alignment for GI: 254780398 and conserved domain: PRK00216
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed.
Probab=98.88 E-value=4.6e-09 Score=76.66 Aligned_cols=105 Identities=16% Similarity=0.301 Sum_probs=79.5
Q ss_pred CCCCCHHHHHHHHH----CCCC-CCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCC-C-CEEEE
Q ss_conf 78884479999998----1898-4336584112398999999997198999879997589882346775023-5-25998
Q gi|254780398|r 3 MNNKSHSLKTILSH----YKII-PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG-A-RKVIV 75 (284)
Q Consensus 3 ~~~~~~~i~~ll~~----~~~~-p~k~lGQnFL~d~~i~~~iv~~~~~~~~~~VlEIGpG~G~LT~~Ll~~~-~-~~v~a 75 (284)
T Consensus 6 ~~~k~~~V~~~Fd~iA~~YD~~N~~~S~G~~~~----Wr~~~v~~l~~~~g~~vLDvgcGTG~~~~~l~~~~~~~~~v~g 81 (239)
T PRK00216 6 LEEKQEKVAEVFDSIAPKYDLMNDLLSFGLHRV----WRRKTIKWLGVRPGDKVLDLACGTGDLAIALAKAVGETGEVVG 81 (239)
T ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH----HHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEE
T ss_conf 567999999999887878858766750751999----9999998627899998988457763879999997299767999
Q ss_pred ECCCCCCHHHHHHHHHHH--HCCCCCCHHHHCCCCHHH
Q ss_conf 425543036887875322--001220000000143155
Q gi|254780398|r 76 IEKDQQFFPILKDISSQH--PNRLEIIQDDALKVDFEK 111 (284)
Q Consensus 76 iEiD~~~~~~l~~~~~~~--~~~~~ii~~Dal~~d~~~ 111 (284)
T Consensus 82 ~D~S~~ML~~A~~k~~~~~~~~~i~~~~~da~~lpf~d 119 (239)
T PRK00216 82 LDFSEGMLAVGREKLLDKGLSGNVEFVQGDAEALPFPD 119 (239)
T ss_pred EECCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
T ss_conf 91988999999999997389888507982355688876