HHsearch alignment for GI: 254780398 and conserved domain: PRK00811
>PRK00811 spermidine synthase; Provisional.
Probab=96.78 E-value=0.0034 Score=40.21 Aligned_cols=77 Identities=19% Similarity=0.298 Sum_probs=58.0
Q ss_pred CHHHHHHHHHHCC---CCCCCEEEEECCCCCHHHHHHHHCC-CCEEEEECCCCCCHHHHHHHHHH-----H-HCCCCCCH
Q ss_conf 9899999999719---8999879997589882346775023-52599842554303688787532-----2-00122000
Q gi|254780398|r 32 DLNILKKIAESSG---SLDGITVIEIGAGPGNLTQMLLTLG-ARKVIVIEKDQQFFPILKDISSQ-----H-PNRLEIIQ 101 (284)
Q Consensus 32 d~~i~~~iv~~~~---~~~~~~VlEIGpG~G~LT~~Ll~~~-~~~v~aiEiD~~~~~~l~~~~~~-----~-~~~~~ii~ 101 (284)
T Consensus 60 DE~~YhE~lvH~pl~~h~~pk~VLIiGGGDGg~~rE~lkh~~v~~v~~VeiD~~Vi~~~~~~lp~~~~~~~~dprv~~~~ 139 (283)
T PRK00811 60 DEFIYHEMMTHVPLLAHPNPKKVLIIGGGDGGTLREVLKHPSVEKITMVEIDERVVEMSRKYLPEISGGAWDDPRVELVI 139 (283)
T ss_pred CHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEH
T ss_conf 57777677540477738997748995687479999984278856799994689999999998388631330297159982
Q ss_pred HHHCCCC
Q ss_conf 0000143
Q gi|254780398|r 102 DDALKVD 108 (284)
Q Consensus 102 ~Dal~~d 108 (284)
T Consensus 140 ~Dg~~fv 146 (283)
T PRK00811 140 GDGVKFV 146 (283)
T ss_pred HHHHHHH
T ss_conf 7899999