HHsearch alignment for GI: 254780398 and conserved domain: PRK12335

Probab=95.94  E-value=0.0023  Score=41.22  Aligned_cols=83  Identities=17%  Similarity=0.301  Sum_probs=55.9

Q ss_pred             HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf             99981898433658411239899999999719899987999758988234677502352599842554303688787532
Q gi|254780398|r   13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ   92 (284)
Q Consensus        13 ll~~~~~~p~k~lGQnFL~d~~i~~~iv~~~~~~~~~~VlEIGpG~G~LT~~Ll~~~~~~v~aiEiD~~~~~~l~~~~~~   92 (284)
T Consensus       101 f~KKY~lt~tHS-------------ev~~a~~~i~pgkaLDLGCG~GRNsLyLa~~Gf-dVTA~D~N~~sl~~L~~ia~~  166 (289)
T PRK12335        101 FHKKYNLTPTHS-------------EVLEAAKTVKPGKALDLGCGQGRNSLYLALLGF-DVTAVDINQASLENLQQIAEK  166 (289)
T ss_pred             HHHHCCCCCCCH-------------HHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCC-CEEEEECCHHHHHHHHHHHHH
T ss_conf             786338998619-------------999987526887466604788822788975798-425886899999999999997


Q ss_pred             HHCCCCCCHHHHCCCCH
Q ss_conf             20012200000001431
Q gi|254780398|r   93 HPNRLEIIQDDALKVDF  109 (284)
Q Consensus        93 ~~~~~~ii~~Dal~~d~  109 (284)
T Consensus       167 E~L~i~~~~yDIN~a~l  183 (289)
T PRK12335        167 ENLNIRAGSYDINSASL  183 (289)
T ss_pred             CCCCCCCEEECCCCCCC
T ss_conf             19887725751666666