HHsearch alignment for GI: 254780398 and conserved domain: TIGR00536

>TIGR00536 hemK_fam methyltransferase, HemK family; InterPro: IPR004556 The gene hemK from Escherichia coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase . Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity . Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. Both Escherichia coli and Haemophilus influenzae have two members rather than one. The members from the Mycoplasmas have an additional C-terminal domain.; GO: 0008276 protein methyltransferase activity, 0006479 protein amino acid methylation.
Probab=91.84  E-value=0.28  Score=28.27  Aligned_cols=93  Identities=16%  Similarity=0.153  Sum_probs=65.4

Q ss_pred             HHCCCCCC-CEEEEECCCCCHHHHHHHHCCC--C-EEEEECCCCCCHHHHHHHHHHH--HCCCCCCHHHHCCCCHHHHCC
Q ss_conf             97198999-8799975898823467750235--2-5998425543036887875322--001220000000143155213
Q gi|254780398|r   41 ESSGSLDG-ITVIEIGAGPGNLTQMLLTLGA--R-KVIVIEKDQQFFPILKDISSQH--PNRLEIIQDDALKVDFEKFFN  114 (284)
Q Consensus        41 ~~~~~~~~-~~VlEIGpG~G~LT~~Ll~~~~--~-~v~aiEiD~~~~~~l~~~~~~~--~~~~~ii~~Dal~~d~~~~~~  114 (284)
T Consensus       119 ~~~~~~~~p~~~~d~~~g~g~~~~~~~~~~~pc~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  197 (311)
T TIGR00536       119 SLLSQPPLPLHILDLGTGSGCIALALAYEFPPCNAEVIAVDLSPDALALAEENAEKLGLEGRVELLQSDLLEPLPGLGG-  197 (311)
T ss_pred             HHHCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCC-
T ss_conf             5411477650111014563156665543046666226641122367888887677643201200101124443320366-


Q ss_pred             CCCCEEEEECCCHHHHHHHHH
Q ss_conf             322201120232246788999
Q gi|254780398|r  115 ISSPIRIIANLPYNIGTRLLF  135 (284)
Q Consensus       115 ~~~~~~vvgNLPYnIss~Il~  135 (284)
T Consensus       198 p-~~~~~~~~ppy~~~~~~~~  217 (311)
T TIGR00536       198 P-KLDLLVSNPPYIDEEDLAD  217 (311)
T ss_pred             C-CEEEEECCCCCCCHHHHHH
T ss_conf             5-2236645886544134555