HHsearch alignment for GI: 254780398 and conserved domain: pfam03602

>pfam03602 Cons_hypoth95 Conserved hypothetical protein 95.
Probab=97.94  E-value=5.5e-05  Score=51.35  Aligned_cols=135  Identities=21%  Similarity=0.277  Sum_probs=81.5

Q ss_pred             HHHHHHHHHCC---CCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCC-CCCCHHHHCCCCH
Q ss_conf             99999999719---8999879997589882346775023525998425543036887875322001-2200000001431
Q gi|254780398|r   34 NILKKIAESSG---SLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR-LEIIQDDALKVDF  109 (284)
Q Consensus        34 ~i~~~iv~~~~---~~~~~~VlEIGpG~G~LT~~Ll~~~~~~v~aiEiD~~~~~~l~~~~~~~~~~-~~ii~~Dal~~d~  109 (284)
T Consensus        27 rvrEalFniL~~~~~i~~~~~LDLFaGSGslglEAlSRGA~~v~fvE~~~~a~~~i~~N~~~l~~~~~~~~~~~~~~~--  104 (181)
T pfam03602        27 RVREALFNILAPYFELGGARVLDLFAGSGALGLEALSRGASSVVFVEKDKKAVATLKENLEALGLEGAVLRMDAARAL--  104 (181)
T ss_pred             HHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCHHHHH--
T ss_conf             899999975013455489879982787269899999769988999969999999999999985899779981089999--


Q ss_pred             HHHCCCCCCE-EEEECCCHHHH--HHHHHHHHHHHCCCCCCCHHHHEEEHHHHHHHHHCCC------HHHHHH
Q ss_conf             5521332220-11202322467--8899999852010000001102033447887530123------123323
Q gi|254780398|r  110 EKFFNISSPI-RIIANLPYNIG--TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN------SPHYGR  173 (284)
Q Consensus       110 ~~~~~~~~~~-~vvgNLPYnIs--s~Il~~ll~~~~~~~~~~~~vlmvQkEvA~Rl~a~pg------~k~Yg~  173 (284)
T Consensus       105 ~~~~~~~~~fdiIF~DPPY~~~~~~~~l~~l~~~~~l---~~~~iiiiE~~~~~~~~~~~~~~~~~k~k~YG~  174 (181)
T pfam03602       105 LRLAGKGPPFDLVFLDPPYAKGLIEEALELLAEKGWL---NPNALIVVETESDEELPEQPANLELVREKKYGQ  174 (181)
T ss_pred             HHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCC---CCCEEEEEEECCCCCCCCCCCCEEEEEEEECCC
T ss_conf             8753357888766359975420699999999966665---798099999668778666898708999994498