HHsearch alignment for GI: 254780398 and conserved domain: pfam03602
>pfam03602 Cons_hypoth95 Conserved hypothetical protein 95.
Probab=97.94 E-value=5.5e-05 Score=51.35 Aligned_cols=135 Identities=21% Similarity=0.277 Sum_probs=81.5
Q ss_pred HHHHHHHHHCC---CCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCC-CCCCHHHHCCCCH
Q ss_conf 99999999719---8999879997589882346775023525998425543036887875322001-2200000001431
Q gi|254780398|r 34 NILKKIAESSG---SLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR-LEIIQDDALKVDF 109 (284)
Q Consensus 34 ~i~~~iv~~~~---~~~~~~VlEIGpG~G~LT~~Ll~~~~~~v~aiEiD~~~~~~l~~~~~~~~~~-~~ii~~Dal~~d~ 109 (284)
T Consensus 27 rvrEalFniL~~~~~i~~~~~LDLFaGSGslglEAlSRGA~~v~fvE~~~~a~~~i~~N~~~l~~~~~~~~~~~~~~~-- 104 (181)
T pfam03602 27 RVREALFNILAPYFELGGARVLDLFAGSGALGLEALSRGASSVVFVEKDKKAVATLKENLEALGLEGAVLRMDAARAL-- 104 (181)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCHHHHH--
T ss_conf 899999975013455489879982787269899999769988999969999999999999985899779981089999--
Q ss_pred HHHCCCCCCE-EEEECCCHHHH--HHHHHHHHHHHCCCCCCCHHHHEEEHHHHHHHHHCCC------HHHHHH
Q ss_conf 5521332220-11202322467--8899999852010000001102033447887530123------123323
Q gi|254780398|r 110 EKFFNISSPI-RIIANLPYNIG--TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN------SPHYGR 173 (284)
Q Consensus 110 ~~~~~~~~~~-~vvgNLPYnIs--s~Il~~ll~~~~~~~~~~~~vlmvQkEvA~Rl~a~pg------~k~Yg~ 173 (284)
T Consensus 105 ~~~~~~~~~fdiIF~DPPY~~~~~~~~l~~l~~~~~l---~~~~iiiiE~~~~~~~~~~~~~~~~~k~k~YG~ 174 (181)
T pfam03602 105 LRLAGKGPPFDLVFLDPPYAKGLIEEALELLAEKGWL---NPNALIVVETESDEELPEQPANLELVREKKYGQ 174 (181)
T ss_pred HHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCC---CCCEEEEEEECCCCCCCCCCCCEEEEEEEECCC
T ss_conf 8753357888766359975420699999999966665---798099999668778666898708999994498