HHsearch alignment for GI: 254780398 and conserved domain: pfam03848

Probab=96.96  E-value=0.00029  Score=46.87  Aligned_cols=85  Identities=16%  Similarity=0.310  Sum_probs=60.4

Q ss_pred             HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf             99981898433658411239899999999719899987999758988234677502352599842554303688787532
Q gi|254780398|r   13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ   92 (284)
Q Consensus        13 ll~~~~~~p~k~lGQnFL~d~~i~~~iv~~~~~~~~~~VlEIGpG~G~LT~~Ll~~~~~~v~aiEiD~~~~~~l~~~~~~   92 (284)
T Consensus         9 f~kky~lt~~HS-------------ev~~a~~~i~pgk~LDlgcG~GRNslyLa~~G~-~VtavD~n~~aL~~l~~ia~~   74 (192)
T pfam03848         9 FHKKYNTTPTHS-------------EVLEAVKTVKPGKALDLGCGQGRNSLFLSLLGY-DVTAVDHNENSIANLQDIKEK   74 (192)
T ss_pred             HHHHCCCCCCCH-------------HHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHH
T ss_conf             776248998809-------------999998637997466604789731899986899-179997999999999999997


Q ss_pred             HHCCCCCCHHHHCCCCHHH
Q ss_conf             2001220000000143155
Q gi|254780398|r   93 HPNRLEIIQDDALKVDFEK  111 (284)
Q Consensus        93 ~~~~~~ii~~Dal~~d~~~  111 (284)
T Consensus        75 e~l~i~~~~~Din~~~~~e   93 (192)
T pfam03848        75 ENLDIPTALYDINSASIDE   93 (192)
T ss_pred             CCCCCEEEEECCCCCCCCC
T ss_conf             0997526873155568767