HHsearch alignment for GI: 254780398 and conserved domain: pfam08123
>pfam08123 DOT1 Histone methylation protein DOT1. The DOT1 domain regulates gene expression by methylating histone H3. H3 methylation by DOT1 has been shown to be required for the DNA damage checkpoint in yeast.
Probab=97.79 E-value=0.00015 Score=48.63 Aligned_cols=113 Identities=16% Similarity=0.242 Sum_probs=80.9
Q ss_pred HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHH-HHCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 99981898433658411239899999999719899987999758988234677-50235259984255430368878753
Q gi|254780398|r 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML-LTLGARKVIVIEKDQQFFPILKDISS 91 (284)
Q Consensus 13 ll~~~~~~p~k~lGQnFL~d~~i~~~iv~~~~~~~~~~VlEIGpG~G~LT~~L-l~~~~~~v~aiEiD~~~~~~l~~~~~ 91 (284)
T Consensus 11 ~L~~Y~~fs~~vYGE---llp~fis~ii~~~~l~~~dvF~DLGSGVGnvv~QaAl~tgc~~s~GiEi~~~~a~~A~~~~~ 87 (205)
T pfam08123 11 KLNHYKAFSNEVYGE---LLPEFLSDVLDKCNLGPQDVFVDLGSGVGNCVLQAALEFGCKLSFGCEIMDNASNLAELQDE 87 (205)
T ss_pred HHCCCCCCCCCCCCC---CCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHH
T ss_conf 860678999755113---58899999999839897688998588832999999987096538888865668999999999
Q ss_pred H----------HHCCCCCCHHHHCCCCHHHHCCCCCCEEEEECCCHH
Q ss_conf 2----------200122000000014315521332220112023224
Q gi|254780398|r 92 Q----------HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128 (284)
Q Consensus 92 ~----------~~~~~~ii~~Dal~~d~~~~~~~~~~~~vvgNLPYn 128 (284)
T Consensus 88 ~~~~~~~~~G~~~~~~~l~~gdFl~~~~~~~~~~~a~VI~vNN~~F~ 134 (205)
T pfam08123 88 EFKKRCKLFGKKLGKIEFIRGSFLDNERVEEIIPEADVILVNNFAFD 134 (205)
T ss_pred HHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCEEEEECCCCC
T ss_conf 99999999588768738997777885889986347988999432469