HHsearch results for GI: 254780398 and protein with PDBid: 1dus_A

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.16  E-value=1.7e-10  Score=84.17  Aligned_cols=108  Identities=15%  Similarity=0.215  Sum_probs=83.1

Q ss_pred             CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH--H-CCCCCC
Q ss_conf             6584112398999999997198999879997589882346775023525998425543036887875322--0-012200
Q gi|254780398|r   24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH--P-NRLEII  100 (284)
Q Consensus        24 ~lGQnFL~d~~i~~~iv~~~~~~~~~~VlEIGpG~G~LT~~Ll~~~~~~v~aiEiD~~~~~~l~~~~~~~--~-~~~~ii  100 (284)
                      -+|++.+ |.. .+-+++.+.+.+++.|||+|||.|.++..+++.+ .+|+++|+|+.+++.+++....+  + .+++++
T Consensus        31 vf~~~~~-d~~-t~~Ll~~l~~~~~~~vLDiGcG~G~~~~~la~~~-~~v~~iDis~~~i~~a~~n~~~~~l~~~~i~~~  107 (194)
T 1dus_A           31 VFSYGKV-DKG-TKILVENVVVDKDDDILDLGCGYGVIGIALADEV-KSTTMADINRRAIKLAKENIKLNNLDNYDIRVV  107 (194)
T ss_dssp             STTTTSC-CHH-HHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEE
T ss_pred             CCCCCCC-CHH-HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             7689986-999-9999982898899949995696429999999738-847998263678899999999819998619999


Q ss_pred             HHHHCCCCHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             000001431552133222011202322467889999985
Q gi|254780398|r  101 QDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS  139 (284)
Q Consensus       101 ~~Dal~~d~~~~~~~~~~~~vvgNLPYnIss~Il~~ll~  139 (284)
                      ++|+++. +++    ..--.|++|.||+...+.+..++.
T Consensus       108 ~~D~~~~-~~~----~~fD~Ii~~~~~~~~~~~~~~~l~  141 (194)
T 1dus_A          108 HSDLYEN-VKD----RKYNKIITNPPIRAGKEVLHRIIE  141 (194)
T ss_dssp             ECSTTTT-CTT----SCEEEEEECCCSTTCHHHHHHHHH
T ss_pred             ECCHHHH-CCC----CCCCEEEECCCHHCCCHHHHHHHH
T ss_conf             8736763-356----774399999522116156799999