HHsearch results for GI: 254780398 and protein with PDBid: 3ftd_A
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, antibiotic resistance, methyltransferase; 1.44A {Aquifex aeolicus VF5} PDB: 3ftc_A 3fte_A 3ftf_A*
Probab=100.00 E-value=0 Score=511.87 Aligned_cols=246 Identities=35% Similarity=0.559 Sum_probs=226.5
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCC
Q ss_conf 89843365841123989999999971989998799975898823467750235259984255430368878753220012
Q gi|254780398|r 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRL 97 (284)
Q Consensus 18 ~~~p~k~lGQnFL~d~~i~~~iv~~~~~~~~~~VlEIGpG~G~LT~~Ll~~~~~~v~aiEiD~~~~~~l~~~~~~~~~~~ 97 (284)
.+||||+||||||+|++++++||+.+++.++|.|||||||+|+||+.|+++++++|+|+|+|++++..|++.+. .++
T Consensus 2 mir~kk~lGQnFL~d~~~~~~iv~~~~~~~~d~VlEIGpG~G~LT~~Ll~~~~~~v~aiE~D~~l~~~l~~~~~---~~~ 78 (249)
T 3ftd_A 2 MVRLKKSFGQHLLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSIGD---ERL 78 (249)
T ss_dssp ------CCCSSCEECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTSCC---TTE
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCC---CCE
T ss_conf 87687778845018989999999954899989499969987698999997045707899986620013222204---432
Q ss_pred CCCHHHHCCCCHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHEEEHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 20000000143155213322201120232246788999998520100000011020334478875301231233234543
Q gi|254780398|r 98 EIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177 (284)
Q Consensus 98 ~ii~~Dal~~d~~~~~~~~~~~~vvgNLPYnIss~Il~~ll~~~~~~~~~~~~vlmvQkEvA~Rl~a~pg~k~Yg~LSv~ 177 (284)
+++++||+++|+..+ +.+++|||||||||||+|+.+++.... .+..+++|+|||||+|++|.+ +||+||++
T Consensus 79 ~ii~~D~l~~~~~~~---~~~~~vVgNLPY~Iss~ii~~ll~~~~---~~~~~vlmvQkEvA~Rl~~~~---~y~~lSv~ 149 (249)
T 3ftd_A 79 EVINEDASKFPFCSL---GKELKVVGNLPYNVASLIIENTVYNKD---CVPLAVFMVQKEVAEKLQGKK---DTGWLSVF 149 (249)
T ss_dssp EEECSCTTTCCGGGS---CSSEEEEEECCTTTHHHHHHHHHHTGG---GCSEEEEEEEHHHHHHHHTSS---CCCHHHHH
T ss_pred EEEECCHHHCCHHHC---CCCCEEEECCCHHHHHHHHHHHHHCCC---CCCEEEEEEEHHHHHHHCCCC---CCCHHHHH
T ss_conf 899634011786462---976258614421041799999873145---530057767599998731788---98734699
Q ss_pred HCCCCCEEEECCCCCCEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCC
Q ss_conf 20133201200011000010578757887301258855347678999999997273138999876318178999787774
Q gi|254780398|r 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257 (284)
Q Consensus 178 ~q~~~~v~~~~~V~~~~F~P~PkVdS~vi~l~pk~~~~~~~~~~~~~~~~~~F~~RRK~l~~~L~~~~~~~~l~~~~i~~ 257 (284)
+|++|+++++++|||++|+|+|||||++|+++|++.....+.+.|+.+++.+|++|||+|+|+|. +.+++++|+++
T Consensus 150 ~q~~~~~~~~~~V~~~~F~P~PkVdS~vv~l~~~~~~~~~~~~~~~~~v~~~F~~rRK~l~~~l~----~~~l~~~~i~~ 225 (249)
T 3ftd_A 150 VRTFYDVNYVMTVPPRFFVPPPKVQSAVIKLVKNEKFPVKDLKNYKKFLTKIFQNRRKVLRKKIP----EELLKEAGINP 225 (249)
T ss_dssp HHHHEEEEEEEEECGGGEESCCSSCEEEEEEEECCCSCCCCHHHHHHHHHHHHSSTTSCGGGTSC----HHHHHHTTCCT
T ss_pred HHHHHHEEECCCCCHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHCCCCC
T ss_conf 98664310014566554689996235889987579888531789999999998750455658789----99999879598
Q ss_pred CCCHHCCCHHHHHHHHHHHHHC
Q ss_conf 6571208999999999998636
Q gi|254780398|r 258 NLRAENLSIEDFCRITNILTDN 279 (284)
Q Consensus 258 ~~R~e~Ls~~~~~~L~~~l~~~ 279 (284)
+.|||+|+++||++|++.+.++
T Consensus 226 ~~R~e~Ls~~~~~~L~~~l~~~ 247 (249)
T 3ftd_A 226 DARVEQLSLEDFFKLYRLIEDS 247 (249)
T ss_dssp TCCGGGCCHHHHHHHHHHHHCC
T ss_pred CCCHHHCCHHHHHHHHHHHHHC
T ss_conf 8894779999999999999971