HHsearch results for GI: 254780398 and protein with PDBid: 3lpm_A
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.06 E-value=2.9e-10 Score=82.77 Aligned_cols=102 Identities=20% Similarity=0.267 Sum_probs=76.0
Q ss_pred CCCCCCCHHHHHHHHHHCCC-CCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH--HCCCCCCHH
Q ss_conf 84112398999999997198-999879997589882346775023525998425543036887875322--001220000
Q gi|254780398|r 26 GQNFLLDLNILKKIAESSGS-LDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH--PNRLEIIQD 102 (284)
Q Consensus 26 GQnFL~d~~i~~~iv~~~~~-~~~~~VlEIGpG~G~LT~~Ll~~~~~~v~aiEiD~~~~~~l~~~~~~~--~~~~~ii~~ 102 (284)
|..|-+|.-++...+ .. .++..|||+|+|.|+++..++++...+|++||+|+.+++.++++...+ .++++++++
T Consensus 30 ~~r~~~D~~lLa~~~---~~~~~~~~vLDlG~G~G~~~l~la~~~~~~v~~vDi~~~~~~~A~~N~~~n~l~~~v~~~~~ 106 (259)
T 3lpm_A 30 VFSFSIDAVLLAKFS---YLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEY 106 (259)
T ss_dssp TBCCCHHHHHHHHHC---CCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred CCCCCHHHHHHHHHH---CCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHEEEEH
T ss_conf 734621799999885---08667997999725858999999867898899999989999999999986073301123300
Q ss_pred HHCCCCHHHHCCCCCCEEEEECCCHHHHHH
Q ss_conf 000143155213322201120232246788
Q gi|254780398|r 103 DALKVDFEKFFNISSPIRIIANLPYNIGTR 132 (284)
Q Consensus 103 Dal~~d~~~~~~~~~~~~vvgNLPYnIss~ 132 (284)
|+.++. +....+.--.||+|.||.-++.
T Consensus 107 D~~~~~--~~~~~~~fD~Iv~NPPy~~~~~ 134 (259)
T 3lpm_A 107 DLKKIT--DLIPKERADIVTCNPPYFATPD 134 (259)
T ss_dssp CGGGGG--GTSCTTCEEEEEECCCC-----
T ss_pred HHHHHH--HCCCCCCCCEEEECCCCCCCCC
T ss_conf 111000--1035542547885788536873