PSIBLAST alignment of GI: 254780398 and protein with PDB id: 3fut
>gi|226192683|pdb|3FUT|A Chain A, Apo-Form Of T. Thermophilus 16s Rrna A1518 And A1519 Methyltransferase (Ksga) In Space Group P21212 Length = 271
>gi|226192684|pdb|3FUT|B Chain B, Apo-Form Of T. Thermophilus 16s Rrna A1518 And A1519 Methyltransferase (Ksga) In Space Group P21212 Length = 271
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 89/277 (32%), Positives = 131/277 (47%), Gaps = 19/277 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S++ +L + + K GQNFL+ L++I E++ G V E+G G G LT+ L
Sbjct: 6 SPQSVRALLERHGLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRAL 64
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L +V IEKD + P+L++ S P RL + + ++ANL
Sbjct: 65 LEA-GAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDA-----LLYPWEEVPQGSLLVANL 118
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY+I T L+ + + L L QKEV ER TA+ +P YG L++ A
Sbjct: 119 PYHIATPLVTRLLK----TGRFARLVFLVQKEVAERXTARPKTPAYGVLTLRVAHHAVAE 174
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+FD+ P FFP PKV S+++ P L ++ + AFGKRRKTL +L G
Sbjct: 175 RLFDLPPGAFFPPPKVWSSLVRLTPT---GALDDPGLFRLVEAAFGKRRKTLLNALAAAG 231
Query: 246 -----GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E L G+ +RAE L +E F R+ L
Sbjct: 232 YPKARVEEALRALGLPPRVRAEELDLEAFRRLREGLE 268